Query 012802
Match_columns 456
No_of_seqs 233 out of 1976
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 16:31:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3E-92 1E-96 735.4 42.8 392 63-456 4-399 (490)
2 3ifg_A Succinate-semialdehyde 100.0 5.7E-88 1.9E-92 703.9 45.4 388 65-456 12-400 (484)
3 3rh9_A Succinate-semialdehyde 100.0 1.4E-87 4.8E-92 703.5 47.1 390 63-456 9-400 (506)
4 2o2p_A Formyltetrahydrofolate 100.0 1.1E-87 3.9E-92 705.8 46.5 390 66-456 37-431 (517)
5 3ed6_A Betaine aldehyde dehydr 100.0 1.8E-87 6.1E-92 704.8 46.5 388 65-456 32-426 (520)
6 1bxs_A Aldehyde dehydrogenase; 100.0 5E-87 1.7E-91 699.0 46.9 390 66-456 21-412 (501)
7 4f3x_A Putative aldehyde dehyd 100.0 3E-87 1E-91 700.2 42.9 392 60-456 20-413 (498)
8 3ek1_A Aldehyde dehydrogenase; 100.0 3.8E-87 1.3E-91 699.8 43.2 386 65-456 32-418 (504)
9 3b4w_A Aldehyde dehydrogenase; 100.0 9.9E-87 3.4E-91 696.3 45.6 390 65-456 8-399 (495)
10 3u4j_A NAD-dependent aldehyde 100.0 1E-86 3.6E-91 700.2 46.0 390 65-456 22-414 (528)
11 3iwj_A Putative aminoaldehyde 100.0 2.3E-86 7.7E-91 695.4 47.2 391 64-456 6-405 (503)
12 1o04_A Aldehyde dehydrogenase, 100.0 7.4E-87 2.5E-91 697.6 43.2 389 67-456 21-411 (500)
13 3i44_A Aldehyde dehydrogenase; 100.0 2.4E-86 8.2E-91 693.2 44.1 387 65-456 25-415 (497)
14 1a4s_A ALDH, betaine aldehyde 100.0 4.4E-86 1.5E-90 692.7 45.5 388 64-456 18-412 (503)
15 3k2w_A Betaine-aldehyde dehydr 100.0 1.9E-86 6.4E-91 695.0 42.5 391 62-456 9-404 (497)
16 3r31_A BADH, betaine aldehyde 100.0 3.3E-86 1.1E-90 694.7 42.7 383 65-456 14-404 (517)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 1.3E-85 4.5E-90 693.3 46.0 385 65-456 37-429 (538)
18 3jz4_A Succinate-semialdehyde 100.0 1.6E-85 5.6E-90 686.1 44.6 388 65-456 9-397 (481)
19 2imp_A Lactaldehyde dehydrogen 100.0 1.8E-85 6E-90 685.5 44.5 388 65-456 6-395 (479)
20 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.3E-85 4.4E-90 691.0 43.6 386 66-456 27-421 (515)
21 4e4g_A Methylmalonate-semialde 100.0 7E-86 2.4E-90 692.9 40.5 388 64-456 25-418 (521)
22 3prl_A NADP-dependent glyceral 100.0 2.3E-85 7.7E-90 687.1 43.5 383 64-456 10-398 (505)
23 2ve5_A BADH, betaine aldehyde 100.0 2.1E-85 7.3E-90 687.1 43.2 391 63-456 4-399 (490)
24 1wnd_A Putative betaine aldehy 100.0 2E-85 6.8E-90 686.0 42.7 386 65-456 23-411 (495)
25 2w8n_A Succinate-semialdehyde 100.0 1.3E-84 4.4E-89 679.5 42.9 384 66-456 13-402 (487)
26 4dng_A Uncharacterized aldehyd 100.0 2.2E-84 7.7E-89 678.5 43.5 386 64-456 5-393 (485)
27 2j6l_A Aldehyde dehydrogenase 100.0 3.8E-84 1.3E-88 678.1 43.8 385 65-456 23-412 (500)
28 3r64_A NAD dependent benzaldeh 100.0 4.6E-84 1.6E-88 678.6 43.7 389 61-456 8-400 (508)
29 3pqa_A Lactaldehyde dehydrogen 100.0 3.7E-84 1.3E-88 675.0 42.4 375 68-456 2-380 (486)
30 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.8E-84 2.3E-88 678.5 43.2 384 66-456 38-429 (516)
31 3ros_A NAD-dependent aldehyde 100.0 6.3E-84 2.2E-88 672.9 42.4 371 81-456 4-374 (484)
32 1t90_A MMSDH, probable methylm 100.0 7.9E-84 2.7E-88 673.8 42.3 386 65-456 5-393 (486)
33 1euh_A NADP dependent non phos 100.0 1.6E-83 5.4E-88 670.1 40.8 379 66-456 5-389 (475)
34 3ty7_A Putative aldehyde dehyd 100.0 6.3E-84 2.1E-88 674.0 37.6 385 65-456 7-394 (478)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.8E-83 6.1E-88 672.6 39.9 381 65-456 18-407 (501)
36 3ju8_A Succinylglutamic semial 100.0 8.2E-83 2.8E-87 666.8 44.5 384 66-456 6-392 (490)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 7.6E-83 2.6E-87 673.8 43.5 387 64-456 62-459 (563)
38 3etf_A Putative succinate-semi 100.0 6.6E-81 2.2E-85 648.9 42.8 373 79-456 5-377 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 3.1E-80 1.1E-84 687.6 42.7 386 65-456 531-923 (1026)
40 2y53_A Aldehyde dehydrogenase 100.0 1.2E-79 4.2E-84 649.2 38.6 381 66-456 8-415 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 1.3E-79 4.5E-84 640.5 38.1 371 78-456 3-376 (474)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.1E-75 3.8E-80 608.2 41.2 361 81-456 6-370 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 1E-75 3.5E-80 618.4 35.1 372 64-456 28-424 (528)
44 3sza_A Aldehyde dehydrogenase, 100.0 6.4E-74 2.2E-78 595.8 40.7 344 100-456 15-362 (469)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.5E-74 5.1E-79 607.1 35.1 362 77-456 3-389 (510)
46 3haz_A Proline dehydrogenase; 100.0 4.2E-72 1.4E-76 621.2 39.4 351 97-456 544-898 (1001)
47 3my7_A Alcohol dehydrogenase/a 100.0 1E-64 3.6E-69 525.2 23.7 333 97-456 1-348 (452)
48 3k9d_A LMO1179 protein, aldehy 100.0 9.7E-65 3.3E-69 527.1 23.2 336 96-456 5-353 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 3.4E-64 1.2E-68 521.6 18.3 320 84-456 10-347 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 7.1E-63 2.4E-67 512.3 13.1 312 104-456 15-352 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.3E-59 4.5E-64 485.7 24.5 305 102-456 25-351 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 1.7E-59 5.7E-64 482.6 21.5 303 102-456 13-334 (427)
53 4gic_A HDH, histidinol dehydro 87.6 24 0.00081 35.0 22.3 167 193-372 119-296 (423)
54 3v4g_A Arginine repressor; vib 75.2 7.1 0.00024 34.2 6.9 122 124-269 29-152 (180)
55 3lap_A Arginine repressor; arg 72.2 44 0.0015 28.8 11.2 124 125-269 17-146 (170)
56 1kae_A HDH, histidinol dehydro 60.9 1.4E+02 0.0046 29.7 18.8 165 194-372 114-290 (434)
57 1b4a_A Arginine repressor; hel 52.8 41 0.0014 28.3 7.3 57 229-302 89-145 (149)
58 1b93_A Protein (methylglyoxal 52.0 35 0.0012 28.8 6.7 114 205-344 12-135 (152)
59 2yvq_A Carbamoyl-phosphate syn 47.9 31 0.0011 28.7 5.7 73 231-314 50-132 (143)
60 1b4b_A Arginine repressor; cor 46.8 34 0.0012 24.8 5.1 56 230-302 12-67 (71)
61 2xw6_A MGS, methylglyoxal synt 45.9 12 0.0004 31.2 2.6 83 219-312 19-110 (134)
62 2zfz_A Arginine repressor; DNA 45.7 37 0.0012 25.2 5.2 36 230-269 20-55 (79)
63 2p5m_A Arginine repressor; alp 40.3 35 0.0012 25.6 4.4 36 230-269 24-59 (83)
64 3fxd_A Protein ICMQ; helix bun 39.8 90 0.0031 21.5 6.2 47 100-152 5-51 (57)
65 3v42_A Folliculin; tumor suppr 39.4 18 0.0006 32.9 3.0 68 221-296 21-88 (226)
66 1xxa_A ARGR, arginine represso 39.4 26 0.00088 26.0 3.4 37 230-269 14-50 (78)
67 1vmd_A MGS, methylglyoxal synt 35.4 43 0.0015 29.1 4.7 122 197-344 19-151 (178)
68 1y5e_A Molybdenum cofactor bio 31.2 23 0.00079 30.3 2.3 53 243-295 30-85 (169)
69 3pzy_A MOG; ssgcid, seattle st 31.1 33 0.0011 29.2 3.3 52 244-296 27-80 (164)
70 3iwt_A 178AA long hypothetical 29.2 86 0.0029 26.7 5.8 53 243-295 39-94 (178)
71 2ioj_A Hypothetical protein AF 29.1 57 0.002 26.6 4.4 44 261-304 53-96 (139)
72 2v9v_A Selenocysteine-specific 28.5 63 0.0021 25.9 4.5 80 334-416 36-124 (135)
73 3rfq_A Pterin-4-alpha-carbinol 28.0 35 0.0012 29.8 3.0 55 242-296 47-103 (185)
74 1wu2_A MOEA protein, molybdopt 23.9 24 0.00081 34.9 1.1 68 230-297 190-265 (396)
75 3fgh_A Transcription factor A, 21.4 71 0.0024 22.3 3.1 29 120-148 36-64 (67)
76 2pjk_A 178AA long hypothetical 20.5 57 0.0019 28.2 2.8 57 240-296 36-95 (178)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3e-92 Score=735.44 Aligned_cols=392 Identities=43% Similarity=0.740 Sum_probs=375.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+.+.++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|++++..+|.++|+++++.|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++++|++++++|+|||+.+++..|+..+++.++||+++++++.+...+...+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999998876799999999999999998887776666677889999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 55589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeC
Confidence 99999999999999999999999999999999998643 469999999999999999999999999999999996
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.7e-88 Score=703.86 Aligned_cols=388 Identities=39% Similarity=0.640 Sum_probs=371.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++||+.+.++..+...+.. .+...+++++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999874 999999999999999888766555433 4567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|.+||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFA 400 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeC
Confidence 9999999999999999999999999999999998755579999999999999999999999999999999996
No 3
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.4e-87 Score=703.45 Aligned_cols=390 Identities=35% Similarity=0.570 Sum_probs=373.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEE-ccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (456)
+.++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999988 6999999999999999998877665544566788889 99999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFR 400 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeC
Confidence 9999999999999999999999999999999999976433 79999999999999999999999999999999996
No 4
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.1e-87 Score=705.83 Aligned_cols=390 Identities=43% Similarity=0.803 Sum_probs=369.6
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998666789999999999999999999999999999999999985569999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC----CCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999874699999999999999998876654443 223367899999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|++||+|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred Hh-hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 302 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 302 aa-~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
++ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 6 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 431 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcC
Confidence 9999999999999999999999999999999999997644469999999999999999999999999999999996
No 5
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.8e-87 Score=704.81 Aligned_cols=388 Identities=38% Similarity=0.655 Sum_probs=371.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~--~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|+++++.|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4679999999988788999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+.++|++++++|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999875 999999999999999988776555433 46678899999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++..|.+||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 426 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeC
Confidence 999999999999999999999999999999999997642 479999999999999999999999999999999996
No 6
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=5e-87 Score=698.99 Aligned_cols=390 Identities=57% Similarity=0.980 Sum_probs=370.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987677899999999999999999999999999999999999743 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999988766799999999999999998877655444445567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh-
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA- 303 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa- 303 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|++||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999987888999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeC
Confidence 9999999999999999999999999999999997654469999999999999999999999999999999996
No 7
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=3e-87 Score=700.19 Aligned_cols=392 Identities=35% Similarity=0.604 Sum_probs=371.0
Q ss_pred CCCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 012802 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (456)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~ 139 (456)
+..+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 96 (498)
T 4f3x_A 20 FQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADA 96 (498)
T ss_dssp ---CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHH
T ss_pred hhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 344455789999999987666 999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHH
Q 012802 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (456)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (456)
|+++.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 97 l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (498)
T 4f3x_A 97 IEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLM 176 (498)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHH
Confidence 9999999999999999999999844699999999999999988876654432 245678899999999999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i 298 (456)
+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 255 (498)
T 4f3x_A 177 MMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKV 255 (498)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCC
Q 012802 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (456)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 378 (456)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 ~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 256 LAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHhhCCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 379 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 413 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFT 413 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeC
Confidence 99999999999999999999999999999999 9999998755689999999999999999999999999999999996
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3.8e-87 Score=699.81 Aligned_cols=386 Identities=38% Similarity=0.663 Sum_probs=369.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999875 999999999999999888766554432 3567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeC
Confidence 99999999999999999999999999999999975 369999999999999999999999999999999996
No 9
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.9e-87 Score=696.30 Aligned_cols=390 Identities=37% Similarity=0.618 Sum_probs=369.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.+|.|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999876778999999999999999999999999999999999998667999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999874699999999999999988877655443334567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|++|++||+|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999987
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 247 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 -MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp -TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred -cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 999999999999999999999999999999997643 369999999999999999999999999999999996
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-86 Score=700.18 Aligned_cols=390 Identities=43% Similarity=0.736 Sum_probs=371.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++||+++.|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999212899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 9999999999999999998 46999999999999999988776655544 466789999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 999999999999999999999999999999999986543 79999999999999999999999999999999996
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.3e-86 Score=695.36 Aligned_cols=391 Identities=40% Similarity=0.723 Sum_probs=370.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l 140 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.+| .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 34679999999988788999999999999999999999999999999999999743 799999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc---CC-CCCceEEEEEccceEEEEEcCcChh
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (456)
+++.++|++++++|+|||+.++.. |+..+++.++|++.+++++.+... .. ..+...++.++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999864 999999999999999888765431 11 2356788999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHH
Q 012802 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~ 296 (456)
+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.|++||+|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 245 ~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 99999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEE
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~ 454 (456)
|||+++++++||+++..+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999997643 5799999999999999999999999999999999
Q ss_pred eC
Q 012802 455 YK 456 (456)
Q Consensus 455 ~~ 456 (456)
|+
T Consensus 404 ~~ 405 (503)
T 3iwj_A 404 FS 405 (503)
T ss_dssp ES
T ss_pred eC
Confidence 96
No 12
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.4e-87 Score=697.57 Aligned_cols=389 Identities=61% Similarity=1.015 Sum_probs=369.0
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987677899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.++...|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987667999999999999999888766544444455678999999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh-h
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K 304 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa-~ 304 (456)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|+.|++||+|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999977789999999999999999999999999999998 6
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeC
Confidence 999999999999999999999999999999997643469999999999999999999999999999999996
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2.4e-86 Score=693.21 Aligned_cols=387 Identities=35% Similarity=0.597 Sum_probs=364.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRS 102 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999988888999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEE-EccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++..|+..+++.++|+++..+......... .+...++. ++|+|||++|+|||||+.+.+++
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 103 SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999875699999999999998776543322211 13446677 99999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+||+|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|++
T Consensus 262 ~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 N-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred h-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 8999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCc-ccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||. ... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 9999999999999999999999999999999994 322 379999999999999999999999999999999996
No 14
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.4e-86 Score=692.67 Aligned_cols=388 Identities=37% Similarity=0.683 Sum_probs=367.7
Q ss_pred CccCceecCEeeeCCCCCe-eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998766788 99999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+.++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999986 4999999999999999988766543333344678999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +++..|..|++||+|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8899999999999999999999999999999
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc--C----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||... . .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 369999999999999999999999999999999996
No 15
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.9e-86 Score=694.99 Aligned_cols=391 Identities=35% Similarity=0.595 Sum_probs=370.0
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012802 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (456)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (456)
..+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34557899999999987889999999999999999999999999999999999999 8999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
++.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999987 599999999999999988876654443 24667889999999999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 246 ~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcc--cCC--CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++||+++..+++++.++|++++++|+++++||.. .+. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99999999999999999999999999999999999973 222 69999999999999999999999999999999996
No 16
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.3e-86 Score=694.72 Aligned_cols=383 Identities=38% Similarity=0.678 Sum_probs=367.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 91 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRERN 91 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh----hcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
++|++++++|+|||+.++ |+..+++.++|++++.++ +.+...+...+. .+++++|+|||++|+|||||+...
T Consensus 92 ~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~ 167 (517)
T 3r31_A 92 DALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIA 167 (517)
T ss_dssp HHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHH
Confidence 999999999999999886 999999999999999988 666655544455 899999999999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.||+||+|+||||+.+|+.|++
T Consensus 168 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 168 CWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 7789999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 247 ~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 325 (517)
T 3r31_A 247 AAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325 (517)
T ss_dssp HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred Hhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcc-c---CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-L---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~---~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++|| . . .++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (517)
T 3r31_A 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404 (517)
T ss_dssp STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence 999999999999999999999999999999999999 4 2 2479999999999999999999999999999999996
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.3e-85 Score=693.28 Aligned_cols=385 Identities=34% Similarity=0.574 Sum_probs=368.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999997 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHH-hHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+++|++++++|+|||+.++.. |+..+++.++||+++ .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999876 999999999999998 566667666544567889999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCC------CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 303 a~~~------~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|||+|+++++||+++..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999996
No 18
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.6e-85 Score=686.10 Aligned_cols=388 Identities=37% Similarity=0.669 Sum_probs=370.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||..+++. |+..+++.++|++.+..+..+...+. ..+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999874 99999999999999887766655443 24567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 397 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEEC
Confidence 9999999999999999999999999999999998655568999999999999999999999999999999996
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.8e-85 Score=685.53 Aligned_cols=388 Identities=35% Similarity=0.617 Sum_probs=368.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 5999999999999998887766554332 2456789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|.+|++||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC-C
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 382 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~ 382 (456)
+ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~ 395 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEES
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeC
Confidence 99999999999999999999999999999999997633469999999999999999999999999999999996
No 20
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-85 Score=690.97 Aligned_cols=386 Identities=42% Similarity=0.730 Sum_probs=367.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.++. .|+..+++.++|+++++++..+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999987 699999999999999988877665443 335567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|++||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--------CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999996
No 21
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7e-86 Score=692.87 Aligned_cols=388 Identities=29% Similarity=0.467 Sum_probs=367.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 25 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 102 (521)
T 4e4g_A 25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLNDN 102 (521)
T ss_dssp EEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred hccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887789999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
.++|++++++|+|||+.+++ .|+..+++.++||+++.+.+.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 103 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 181 (521)
T 4e4g_A 103 MNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMW 181 (521)
T ss_dssp HHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHH
Confidence 99999999999999999987 49999999999999988777655432 12356788999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.||+||+|+||||+.+|+.|++.+
T Consensus 182 ~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~a 260 (521)
T 4e4g_A 182 MFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTA 260 (521)
T ss_dssp HHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999995 45679999999999999999999999999999
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcccCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|++
T Consensus 261 a~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~ 339 (521)
T 4e4g_A 261 AM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTD 339 (521)
T ss_dssp HH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTC
T ss_pred hh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCC
Confidence 88 89999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||... ..+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 340 EKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred ccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 99999999999999999999999999999999999752 2579999999999999999999999999999999985
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.3e-85 Score=687.11 Aligned_cols=383 Identities=34% Similarity=0.520 Sum_probs=364.8
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345899999999887789999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--C----CceEEEEEccceEEEEEcCcChhH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPL 217 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~ 217 (456)
.++|++++++|+|||+.++.. |+..+++.++|++++.++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999875 999999999999999888766543321 1 456789999999999999999999
Q ss_pred HHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+++..|..||+||+|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
|++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999876 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 999 9999999999999999999999999999999999974 58999999999999999999999999999999996
No 23
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.1e-85 Score=687.07 Aligned_cols=391 Identities=43% Similarity=0.740 Sum_probs=373.0
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+.++|++++++|+|||+.+++..|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 161 (490)
T 2ve5_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHH
Confidence 99999999999999999998766999999999999999888766555444567788999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.+..|..||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a 241 (490)
T 2ve5_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred -hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 303 -AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 303 -a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
+. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+|
T Consensus 242 ~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d 320 (490)
T 2ve5_A 242 SSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 76 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~ 399 (490)
T 2ve5_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeC
Confidence 999999999999999999999999999999999997632 369999999999999999999999999999999996
No 24
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2e-85 Score=685.99 Aligned_cols=386 Identities=38% Similarity=0.658 Sum_probs=365.5
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999998655 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++...|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998655999999999999999887765544322 2446789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999977788999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|||+|++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCC-CEEEeCCc-ccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++| +++++||. .. +.|+|++||||.+++++|++++||+||||++|++|+
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 411 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeC
Confidence 99999999999999999999999999 99999997 43 369999999999999999999999999999999996
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.3e-84 Score=679.52 Aligned_cols=384 Identities=37% Similarity=0.629 Sum_probs=365.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+. ++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.++.. |+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999875 99999999999999988876665443 235677899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEec---CCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~---g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+ |++.+.+..|.+|++||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8677789999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh-cccCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~ 380 (456)
+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++|||.
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCc-eEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++||+++..+++++.++|++++++|+++++||... ++|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 999999999999999999999999999999999999763 3689 99999999999999999999999999999996
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-84 Score=678.55 Aligned_cols=386 Identities=31% Similarity=0.508 Sum_probs=366.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..+++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
.++|++++++|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999886 999999999999999988777655432 35678999999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHH-HHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
+++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999988789999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 393 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEES
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeC
Confidence 99999999999999999999999999999999999975 58999999999999999999999999999999996
No 27
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.8e-84 Score=678.05 Aligned_cols=385 Identities=28% Similarity=0.492 Sum_probs=363.2
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI 98 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 478999999994 568899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 99 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 99 QVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 9999999999999999985 5999999999999998877766544432 2445678899999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHH----HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
+++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.+++..|..|++||+|+||||+.+|+.|+
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999988876 46999999999999 778899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 99988 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEEC
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeC
Confidence 99999999999999999999999999999999999997644569999999999999999999999999999999996
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.6e-84 Score=678.65 Aligned_cols=389 Identities=35% Similarity=0.575 Sum_probs=369.4
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012802 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (456)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445567899999999887889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--CCceEEEEEccceEEEEEcCcChhHH
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (456)
+++.++|++++++|+|||..+++. |+..+++.++|++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999876 999999999999998877665 44322 35678899999999999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHH-HHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
..++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999977889999999999999999999999999
Q ss_pred HHHHHhhC-CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 298 i~~~aa~~-~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
|++.++++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|+++++++||+++..+++++.++|++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 58999999999999999999999999999999996
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.7e-84 Score=675.00 Aligned_cols=375 Identities=30% Similarity=0.532 Sum_probs=353.0
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
++++++|+|||..+++ .|+..+++.++|++++++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999987 4999999999999999988766555443 5678899999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
|++||+||+|||+.+|+++.++++++.++ |+|+|++|+|+|++.+++..|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999999875
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~ 380 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTN 380 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEEC
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEc
Confidence 99999999999999999999999999999999965 5899999999 999999999999999999999996
No 30
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.8e-84 Score=678.52 Aligned_cols=384 Identities=34% Similarity=0.553 Sum_probs=362.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+++||||+|+. ++++++++||+ ||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 35789999999 6999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC--CCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999987 59999999999999998888765432 22345678999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++|++||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997788999999999999999999999999999998
Q ss_pred hh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 303 a~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+. +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 81 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+| ++++++||+++..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 99 99999999999999999999999999999 8999997533469999999999999999999999999999999996
No 31
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.3e-84 Score=672.90 Aligned_cols=371 Identities=27% Similarity=0.456 Sum_probs=356.9
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 4 ~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 81 (484)
T 3ros_A 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLS 81 (484)
T ss_dssp CCCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 3589999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCC
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (456)
+++ .|+..+++.++|+++++++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 160 (484)
T 3ros_A 82 ESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAH 160 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 988 5999999999999999988877655444567889999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCce
Q 012802 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (456)
Q Consensus 241 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~ 320 (456)
.+|+++..+++++.++|+|+|++|+|+|++.+.+. |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+
T Consensus 161 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 161 NVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAF 238 (484)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEE
T ss_pred CChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcc
Confidence 99999999999999999999999999998878888 9999999999999999999999999998 899999999999999
Q ss_pred EeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 012802 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (456)
Q Consensus 321 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 400 (456)
||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+++..+++++.+
T Consensus 239 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 374 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEES
T ss_pred HHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcC
Confidence 99999999999999998655689999999999999999999999999999999996
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.9e-84 Score=673.84 Aligned_cols=386 Identities=32% Similarity=0.530 Sum_probs=364.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999886 59999999999999877776655432 123456788999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|++|++||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998 5578999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCce-eEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|.++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc-CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||... .++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 9999999999999999999999999999999999743 2369999999999999999999999999999999996
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.6e-83 Score=670.14 Aligned_cols=379 Identities=31% Similarity=0.489 Sum_probs=358.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
+++||||+|+.+.+ +++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++.+
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997544 899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CC----ceE-EEEEccceEEEEEcCcChhHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
+|++++++|+|||+.++. .|+..+++.++|+++++++..+...+.. .+ ... ++.++|+|||++|+|||||+..
T Consensus 81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 999999999999999986 5999999999999998887655543321 23 456 8999999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|++||+|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 389 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecC
Confidence 99 999999999999999999999999999999999965 48999999999999999999999999999999996
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.3e-84 Score=674.03 Aligned_cols=385 Identities=36% Similarity=0.617 Sum_probs=365.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 84 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRK 84 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++|+++++++..+... ....++.++|+|||++|+|||||+...++++
T Consensus 85 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 85 DDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 999999999999999998567999999999999999887765432 2357889999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|..||+||+|+||||+.+|+.|++.+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~ 240 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 241 -~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 241 -DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp -TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred -cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 999999999999999999999999999999994321 479999999999999999999999999999999996
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.8e-83 Score=672.61 Aligned_cols=381 Identities=28% Similarity=0.424 Sum_probs=360.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.+++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||.. .|+.++.++|.++|+++++.|++++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999753 78999999999999999999999999999999999962 4999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC---CC--CceEEEEEccceEEEEEcCcChhHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+. .. +...++.++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999987 599999999999999988876654443 22 34678999999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +++..|..|++||+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCC-ceEecEEEeeCC---CCCcccccccccceeEEEEe
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 455 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~PTvl~~v~---~~~~i~~~EifGPvl~v~~~ 455 (456)
+|+++++||+++..+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred C
Q 012802 456 K 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 407 ~ 407 (501)
T 1uxt_A 407 K 407 (501)
T ss_dssp S
T ss_pred C
Confidence 6
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.2e-83 Score=666.77 Aligned_cols=384 Identities=30% Similarity=0.419 Sum_probs=363.5
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+. +.++.++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++++
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 82 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD 82 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999753 57899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.+++ .|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 83 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (490)
T 3ju8_A 83 ELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV 161 (490)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence 999999999999999987 5999999999999998888776654322344567789999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|++.+++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~- 239 (490)
T 3ju8_A 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG- 239 (490)
T ss_dssp HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-
T ss_pred HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999 67889999999999999999999999999999887
Q ss_pred CCCcE-EEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccch-HHHHHHHHHHHhhhcccCC-CCCC
Q 012802 306 NLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKG 382 (456)
Q Consensus 306 ~~~pv-~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~-p~~~ 382 (456)
+++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|+
T Consensus 240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 88998 8999999999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+. ++++|++++||+||||++|++|+
T Consensus 320 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 320 APFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 99999999999999999999999999999999998766689999999999 99999999999999999999996
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=7.6e-83 Score=673.83 Aligned_cols=387 Identities=27% Similarity=0.386 Sum_probs=362.7
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
..+++||||+|+.+. .++.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999743 4678999998 799999999999999999999999999 89999999999999999999999
Q ss_pred c-HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 143 ~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
+ +++|+.++++|+|||+.++...++..+++.++|++.+++++.+.... .+.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999987645999999999999999888764332 222344567778889999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCC------cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhc
Q 012802 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (456)
Q Consensus 301 ~aa~~~~~------pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 374 (456)
.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9988 777 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEE
Q 012802 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (456)
Q Consensus 375 ~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v 452 (456)
++||| +|+++++||+++..+++++.++|+++++ +|+++++||...+.+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EEeC
Q 012802 453 LKYK 456 (456)
Q Consensus 453 ~~~~ 456 (456)
++|+
T Consensus 456 ~~~~ 459 (563)
T 4e3x_A 456 YVYP 459 (563)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9995
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=6.6e-81 Score=648.94 Aligned_cols=373 Identities=29% Similarity=0.468 Sum_probs=355.0
Q ss_pred CCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC
Q 012802 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (456)
Q Consensus 79 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 158 (456)
+..+++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 446789999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeec
Q 012802 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (456)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (456)
+.+++. |+..+++.++|++++.++..+.......+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999874 9999999999999998887665432223567889999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC
Q 012802 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (456)
Q Consensus 239 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (456)
|+.+|+++.++++++.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 45678899999999999999999999999999998 8999999999999
Q ss_pred ceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHH
Q 012802 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 319 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~ 377 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAK 377 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcC
Confidence 9999999999999999998665689999999999999999999999999999999996
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.1e-80 Score=687.59 Aligned_cols=386 Identities=31% Similarity=0.512 Sum_probs=365.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..++||||+|+. ++++++++||+| ++++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999996 467899999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+++|+.++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999875 99999999999999998876554332 3466788999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+|++|+||||+.+|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 303 a~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+. +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.++++++||+|+..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 99999999999999999999999999999999 9999997644459999999999999999999999999999999985
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.2e-79 Score=649.15 Aligned_cols=381 Identities=25% Similarity=0.359 Sum_probs=347.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997544 579999999999999999988 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc-------cCCC--CCceEEEEEccc-eEEEEEcCcC
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (456)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999874 99999999999999887764321 1221 222467889997 9999999999
Q ss_pred hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcC-CCccEEEEeCCh
Q 012802 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGST 292 (456)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~-~~v~~V~ftGS~ 292 (456)
||+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ +++|+|+||||+
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~ 238 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSA 238 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCH
Confidence 9999999999999999999999999999999999999999999 899999999986543 3333 579999999999
Q ss_pred HHHHHHHHHHh-hCCCCcEEEecCCCCceEeccCC-----CHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHH
Q 012802 293 TTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366 (456)
Q Consensus 293 ~~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 366 (456)
.+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998774 23899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc------CCCCceEecEEEeeCCCC--C
Q 012802 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDD--M 438 (456)
Q Consensus 367 l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~--~ 438 (456)
|+++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... ..+|+|++||||.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 6899999999642 136999999999999987 6
Q ss_pred cccccccccceeEEEEeC
Q 012802 439 LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~~~ 456 (456)
.+++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999996
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.3e-79 Score=640.47 Aligned_cols=371 Identities=28% Similarity=0.402 Sum_probs=347.3
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 012802 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (456)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (456)
...+|++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhccchHHHHHHHHHHHHHhHhhcCccc-C-CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEE
Q 012802 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (456)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (456)
+... . .|+...++.++||+.+..+...... . ...+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 4999999999999988877644322 2 123456677889999999999999999999999999999999999
Q ss_pred eecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecC
Q 012802 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (456)
Q Consensus 236 lkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelg 315 (456)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 56778888876 8999999999999999999988 8999999999
Q ss_pred CCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHH
Q 012802 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (456)
Q Consensus 316 G~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~ 395 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 396 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~ 376 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFP 376 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEEC
Confidence 9999999999999999999997643 578999999999999999999999999999999996
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.1e-75 Score=608.24 Aligned_cols=361 Identities=25% Similarity=0.389 Sum_probs=322.1
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
..+++.||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcc-cCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEe
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (456)
+++..|+..+++.++|+++..++..+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9876699999999999999887765421 211 134678899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCC
Q 012802 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (456)
Q Consensus 237 kps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG 316 (456)
|||+.+|+++..+++++.++ +|+|++|+|+| +.+.+..|++ ++||+|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999998 99999999999 6778889998 689999999999999999999987 89999999999
Q ss_pred CCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHH
Q 012802 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (456)
Q Consensus 317 ~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~ 396 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++..+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6666 999999999999
Q ss_pred HHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 397 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.++|+++. +++++||... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 370 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFD 370 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEES
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeC
Confidence 9999999863 5999999753 369999999999999999999999999999999996
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-75 Score=618.42 Aligned_cols=372 Identities=23% Similarity=0.321 Sum_probs=338.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+..++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++
T Consensus 28 ~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3468999999997532 89999999998 9999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh--cCccc----CC---CCCceEEEEEccceEEEEEcCc
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIPW 213 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p~ 213 (456)
++++|++++++|+|||+.++. .|+..+++.++||++++++. .+... +. ..+...++.++|+|||++|+||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 179 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS 179 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCC
Confidence 999999999999999999877 49999999999999988772 22211 11 1234578899999999999999
Q ss_pred ChhHHHHH--HHHhhhhhcCCEEEeecCCCChhHHHHHHHHH----HHcCCCCCeEEEecCCchHHHHHHHcCCCccEEE
Q 012802 214 NFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287 (456)
Q Consensus 214 n~P~~~~~--~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ 287 (456)
|||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++..|+.||+||+|+
T Consensus 180 N~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~ 259 (528)
T 3v4c_A 180 NFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVG 259 (528)
T ss_dssp SSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEE
T ss_pred cchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEE
Confidence 99999865 99999999999999999999999999999875 4689999999999998888999999999999999
Q ss_pred EeCChHHHHHHHHHHhhCCC--CcEEEecCCCCceEeccCC---CHHHHHHHHHHHHhccCCCcccCCceeEeccc-hHH
Q 012802 288 FTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYD 361 (456)
Q Consensus 288 ftGS~~~g~~i~~~aa~~~~--~pv~lelgG~~~~iV~~da---D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d 361 (456)
||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||
T Consensus 260 fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 338 (528)
T 3v4c_A 260 FTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADAD 338 (528)
T ss_dssp EESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHH
T ss_pred EECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHH
Confidence 99999999999999988 77 9999999999999999999 88999999999999999999999999999997 999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCC---C
Q 012802 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---M 438 (456)
Q Consensus 362 ~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~ 438 (456)
+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. +|+|++|||+.+++++ |
T Consensus 339 ~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~ 406 (528)
T 3v4c_A 339 RFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLAD 406 (528)
T ss_dssp HHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccC
Confidence 9999999999988643 67899999888888887764 489999999974 6999999999998888 9
Q ss_pred cccccccccceeEEEEeC
Q 012802 439 LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~~~ 456 (456)
++++||+||||++|++|+
T Consensus 407 ~i~~eEiFGPVl~V~~~~ 424 (528)
T 3v4c_A 407 HALGEEVFGPLGLVVRVG 424 (528)
T ss_dssp GGGGCCCSSSEEEEEEES
T ss_pred hhhcccccCCeEEEEecC
Confidence 999999999999999996
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=6.4e-74 Score=595.77 Aligned_cols=344 Identities=28% Similarity=0.396 Sum_probs=315.8
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHH
Q 012802 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (456)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (456)
.+.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.++|++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 999999999999999999999999999999999999999999876799999999998887
Q ss_pred HhHhhcCcc----cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH
Q 012802 180 WADKIQGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (456)
Q Consensus 180 ~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~ 255 (456)
......... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 665443211 1112245688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHH
Q 012802 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (456)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i 335 (456)
+ +|+|++|+|+|++ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 445667777 89999999999999999999987 899999999999999999999999999999
Q ss_pred HHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeC
Q 012802 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 415 (456)
Q Consensus 336 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~g 415 (456)
++++|.|+||.|++++|||||+++||+|+++|.++++++ +|+|.++++++||+++..+++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999988 699999999999999999999999998 69999999
Q ss_pred CcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 416 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 416 g~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|... ++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 362 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVR 362 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecC
Confidence 9764 479999999999999999999999999999999986
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.5e-74 Score=607.12 Aligned_cols=362 Identities=21% Similarity=0.310 Sum_probs=331.4
Q ss_pred CCCCCeeeeecCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc
Q 012802 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (456)
Q Consensus 77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~ 155 (456)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 346788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhccchHHHHHHHHHHHHHhHh--hcCccc----CC--CCC-ceEEEEEccceEEEEEcCcChhHHHH--HHHH
Q 012802 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (456)
Q Consensus 156 Gk~~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (456)
|||+.++. .|+..+++.++||++++++ ..+... +. ..+ ...+++++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998875 5999999999999998875 333221 11 111 24678999999999999999999985 4999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHH----HHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++..|+.|++||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977789999999999999999999999999999
Q ss_pred HHhhCCC--CcEEEecCCCCceEeccCCCHH--HHHHHHHHHHhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcc
Q 012802 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (456)
Q Consensus 301 ~aa~~~~--~pv~lelgG~~~~iV~~daD~d--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~ 375 (456)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|.+++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 64 9999999999999999999999 99999999999999999999999999999 99999999999999886
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCCCCceEecEEEeeCCCC---CcccccccccceeE
Q 012802 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 451 (456)
Q Consensus 376 ~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~~i~~~EifGPvl~ 451 (456)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 4 688888999999999999984 8999999996 2899999999988888 99999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|++|+
T Consensus 385 v~~~~ 389 (510)
T 1ez0_A 385 IVVCE 389 (510)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99996
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.2e-72 Score=621.18 Aligned_cols=351 Identities=31% Similarity=0.466 Sum_probs=332.7
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHH
Q 012802 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (456)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 176 (456)
++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 999999999999999999999999999999999999999999864 99999999999
Q ss_pred HHHHhHhhcCcc--cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH
Q 012802 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (456)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~ 254 (456)
|+.+.++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 333456788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC--CCCcEEEecCCCCceEeccCCCHHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~--~~~pv~lelgG~~~~iV~~daD~d~aa 332 (456)
++|+|+|++|+|+|++.+ +..|+.||+|++|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 589999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEE
Q 012802 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (456)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v 412 (456)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 413 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 413 ~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||... +.|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~ 898 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYR 898 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEEC
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeC
Confidence 888653 4699999999975 788999999999999999995
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1e-64 Score=525.19 Aligned_cols=333 Identities=18% Similarity=0.232 Sum_probs=287.9
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHH-H
Q 012802 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (456)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 175 (456)
++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.+++++++|+++++.|+|||+.++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999988755666666666 3
Q ss_pred HHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH-
Q 012802 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~- 254 (456)
++... +..+ ..+.+.+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 1222334557889999999999999999999999999999999999999999999999999888875
Q ss_pred ---HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHH
Q 012802 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (456)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~a 331 (456)
++|+|+|++|+|++++.+.+..|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998654 4444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999887677888
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCcccccccccceeEEEEeC
Q 012802 412 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v~~gg~~~---~~~g~~~~PTv-------l~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~ 348 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRAD 348 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEES
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeC
Confidence 7 476532 13589999997 668899999886 8999999999996
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=9.7e-65 Score=527.09 Aligned_cols=336 Identities=17% Similarity=0.224 Sum_probs=293.4
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHH
Q 012802 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (456)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (456)
.++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+..++...+...+.+.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456778999999999999999 89999999999999999999999999999999999999988765444444444443
Q ss_pred HHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHH----
Q 012802 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~---- 251 (456)
++....+ ..+. .+.+.+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3322111 1111 112345678899999999999999999999999999999999999999999999999998655
Q ss_pred HHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecC-CCCceEeccCCCHHH
Q 012802 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (456)
Q Consensus 252 ~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelg-G~~~~iV~~daD~d~ 330 (456)
++.++|+|+|++|+|++++.+.+..|++||+||+|+||||+.+ ++.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 4688999999999999988889999999999999999999985 445555 78999 7888 999999999999999
Q ss_pred HHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHh-------hhcccCCCC-CCCCccccCCCHHHHHHHHHHH
Q 012802 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 331 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +..++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 467889987 7889999999999999999999
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~ 353 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAE 353 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEES
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeC
Confidence 9999999999999852 577888866 79999999999986
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-64 Score=521.55 Aligned_cols=320 Identities=19% Similarity=0.140 Sum_probs=256.7
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc-------C
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------G 156 (456)
-++||.||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhccchHHHHHHHHHHHHHhHhhcCcccCCC---CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhh
Q 012802 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (456)
Q Consensus 157 k~~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (456)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 5999999999999988877766543311 3456789999999999999777 77666 89999999
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||+||+|||+.+|+++..+++++.++ | |+|++|+|+| +.+++..|..|++||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678899999999999999999999999999876
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||+ + .+++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+
T Consensus 295 -~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~ 347 (463)
T 2h5g_A 295 -TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVD 347 (463)
T ss_dssp -SHH-----H---HHHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEES
T ss_pred -hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeC
Confidence 343 2 34588888999999855542 2235553 5789999999999999999996
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=7.1e-63 Score=512.31 Aligned_cols=312 Identities=17% Similarity=0.159 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhhccchHH-HHHHHHHHH
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 178 (456)
.+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7765568888 889999999
Q ss_pred HHhHhhc------CcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHH
Q 012802 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (456)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l 249 (456)
++.++.. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333221 12456789999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 250 ~~~l~----~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
++++. + +|+|+|++|+|+ ++.+++..|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999999875 599999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc---CCCCCCCCccccCCCHHHHHHH
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87643
Q ss_pred HHH-HHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++ |++++ ++++||. | ++|||+ ++++|.+++||+||||++|++|+
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~ 352 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVT 352 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECC
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeC
Confidence 345 66665 3667775 4 799997 78999999999999999999986
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.3e-59 Score=485.70 Aligned_cols=305 Identities=20% Similarity=0.205 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhc-------cchHHH
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (456)
.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4432 378899
Q ss_pred HHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
++.++|++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333221 23567889999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCeEEEecCCch-HHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+++++ .++|+|+|++|+|+|.+. ..+..|.+||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998654 5788899999999999999999999998765 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc---CCCCCCCCccccCCCHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~ 399 (456)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7653 14
Q ss_pred HHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|+++. + | ++ ++++|++++||+||||++|++|+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~ 351 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVD 351 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEES
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeC
Confidence 5666642 1 2 22 35689999999999999999996
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.7e-59 Score=482.60 Aligned_cols=303 Identities=20% Similarity=0.201 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhh-------ccchHHH
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT 170 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-------~~ev~~~ 170 (456)
.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|+++++.|+||+. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4589999999999999 8999999999999999999999999999999999999985 4443 1489999
Q ss_pred HHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
++.++||+++.++ .+...+. +.+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433221 23456788999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l~----~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+++++. ++|+|+|++|+|+|. +++.+..|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 466789999999999999999999999999876 4899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999987652
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.||.+. .+ |+ ||| ++++|.+++||+||||++|++|+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~ 334 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVK 334 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEES
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEEC
Confidence 2233321 12 33 996 34678999999999999999996
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=87.61 E-value=24 Score=35.05 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=93.9
Q ss_pred CCceEEEEEccceEEEEEcCc---ChhHHHHHHHHhhhhhcCCE-EEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecC
Q 012802 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (456)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~-VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g 268 (456)
.+.....++.|+--|++-.|. .||-..++. .+||..+|+. +|+..++..-.....+.-..+.+|+.+ +..-
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~-aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~e----Iy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMN-AVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVDR----VFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHHHH-HHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCCE----EECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHHHh-hccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCcE----EEEc
Confidence 456677889999999999995 366555554 6889999996 444443322222233334445566643 3333
Q ss_pred CchHHHHHHHc----CCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec-cCCCHHHHHHHHHHHHhccC
Q 012802 269 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC-EDADVDKAAELAHYALFFNQ 343 (456)
Q Consensus 269 ~~~~~~~~L~~----~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~-~daD~d~aa~~i~~~~~~~~ 343 (456)
.|...-.+|.- -|+||+|+=.|+.=+..+ |..-. +..-+=+.-|-.--+||. +++|.+.++..++.-+=...
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd~ 270 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHDE 270 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTCT
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-CCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccCC
Confidence 35554455543 678999999998766443 22221 222222222333334443 35899998877765443322
Q ss_pred CCcccCCceeEeccc--hHHHHHHHHHHHhh
Q 012802 344 GQCCCAGSRTFVHES--VYDQFVEKANALAM 372 (456)
Q Consensus 344 GQ~C~a~~~v~V~~~--i~d~f~~~l~~~~~ 372 (456)
..+.++|..+ ..++..+++.+.+.
T Consensus 271 -----~a~~iLvT~s~~la~~V~~~i~~~l~ 296 (423)
T 4gic_A 271 -----DAQAILISPDAAHLEAVQASIERLLP 296 (423)
T ss_dssp -----TCEEEEEESCHHHHHHHHHHHHHHGG
T ss_pred -----CCeEEEEeCcHHHHHHHHHHHHHHHh
Confidence 2345666554 33444444444443
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=75.17 E-value=7.1 Score=34.18 Aligned_cols=122 Identities=17% Similarity=0.120 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHhcCCCh-hhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEE
Q 012802 124 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201 (456)
Q Consensus 124 ~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~-~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 201 (456)
+..+.|.+.++++...=+ +..+||++++..+ |-.. .++.. .+..+++.-...+...+...|...
T Consensus 29 ~k~~~r~~~I~eiI~~~~I~TQeEL~~~L~~~-Gi~viTQATv-------------SRDIkELglvKv~~~~G~~~Y~lp 94 (180)
T 3v4g_A 29 EKQDNLVRAFKALLKEERFGSQGEIVEALKQE-GFENINQSKV-------------SRMLTKFGAVRTRNAKMEMVYCLP 94 (180)
T ss_dssp -CHHHHHHHHHHHHHHTCCCSHHHHHHHHHHT-TCTTCCHHHH-------------HHHHHHTTCEEEECTTSCEEEECC
T ss_pred ccHHHHHHHHHHHHhhCCcCCHHHHHHHHHHC-CCcccCHHHH-------------HHHHHHcCCEEeeCCCCCEEEEeC
Confidence 445555555444433211 3479999988766 7765 66532 122233333333333333333322
Q ss_pred ccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 202 ~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
...+..- ..-++. ..+...-.+||-+|+|..|- .+..++.++...++|++++..|.|+
T Consensus 95 ~~~~~~~----~~~~l~---~~vvsv~~~~nlvVIkT~PG---~A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 95 TELGVPT----VSSSLR---ELVLDVDHNQALVVIHTGPG---AAQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ------C----TTCCTG---GGEEEEEECSSCEEEEESTT---CHHHHHHHHHHHCGGGTEEEEEECS
T ss_pred Ccccchh----HHHHHH---HHEEEEeecCCEEEEEeCCC---cHHHHHHHHHhCCCCCCeEEEEecC
Confidence 2111110 011111 12233345799999998865 4888999999989999999999884
No 55
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=72.17 E-value=44 Score=28.83 Aligned_cols=124 Identities=18% Similarity=0.185 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHHHHHHHh----cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCce-EEE
Q 012802 125 TAYERSKIILRFADLLER----HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQT 199 (456)
Q Consensus 125 ~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~-~~~ 199 (456)
.-.+|.+ ++.++|.+ ..+||.+++..+ |....++.. ....+++.-...+...+.. .|.
T Consensus 17 ~K~~R~~---~I~~iI~~~~I~tQeEL~~~L~~~-Gi~vTQATl-------------SRDikEL~lvKv~~~~G~~~~Y~ 79 (170)
T 3lap_A 17 NRAGRQA---RIVAILSSAQVRSQNELAALLAAE-GIEVTQATL-------------SRDLEELGAVKLRGADGGTGIYV 79 (170)
T ss_dssp CHHHHHH---HHHHHHHHSCCCSHHHHHHHHHHT-TCCCCHHHH-------------HHHHHHHTCEEECCTTCTTCEEE
T ss_pred CHHHHHH---HHHHHHHhCCCCCHHHHHHHHHHc-CCCcCchhH-------------HHHHHHcCcEEeecCCCCEEEEE
Confidence 3445544 44455554 479999988766 877766532 2222333333344333333 343
Q ss_pred EEccceEEEEEcCcChhHHHHH-HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 200 LHEPIGVAGQIIPWNFPLLMFA-WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 200 ~~~P~GVv~~i~p~n~P~~~~~-~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
.....+..-....+.-.+...+ ..+...-.+||-+|+|..|- .+..++.++...++| +++..|.|+
T Consensus 80 lp~~~~~~~~~~~~~~~l~~~l~~~v~sv~~~~nlvVikT~PG---~A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 80 VPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPG---AAHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp CCC------CCTTHHHHHHHHHHHHCCEEEEETTEEEEECSTT---CHHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ECcccccccccccHHHHHHHHHHHheeEEeecCCEEEEEeCCC---cHHHHHHHHHhCCCC-CeEEEEecC
Confidence 2211111100001111122222 22344456899999998865 488899999999877 689988884
No 56
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=60.91 E-value=1.4e+02 Score=29.73 Aligned_cols=165 Identities=17% Similarity=0.128 Sum_probs=89.8
Q ss_pred CceEEEEEccceEEEEEcCc---ChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCc
Q 012802 194 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG 270 (456)
Q Consensus 194 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~ 270 (456)
|.....++.|+--|++-.|. -||-..+|. .+||-.+|+.=|+--+|-. ....+.-..+.+|+.+ +..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~-aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLML-ATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHHHH-HHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHHHh-hccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55667789999999999996 466555554 6889999987554222211 2223333445666643 232224
Q ss_pred hHHHHHHHc----CCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEe-cCCCCc-eEe-ccCCCHHHHHHHHHHHHhccC
Q 012802 271 PTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKSP-FIV-CEDADVDKAAELAHYALFFNQ 343 (456)
Q Consensus 271 ~~~~~~L~~----~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~le-lgG~~~-~iV-~~daD~d~aa~~i~~~~~~~~ 343 (456)
...-.+|.- -|+||+|+=.|..=+..+ |.........|-.. .-|.+= +|| +++||.+..+..++.-+=...
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 544444432 588999999998765432 22210001112111 133333 333 345899998877765443322
Q ss_pred CCcccCCceeEeccc--hHHHHHHHHHHHhh
Q 012802 344 GQCCCAGSRTFVHES--VYDQFVEKANALAM 372 (456)
Q Consensus 344 GQ~C~a~~~v~V~~~--i~d~f~~~l~~~~~ 372 (456)
..+.++|..+ ..++..+++.+.+.
T Consensus 265 -----~a~aiLvT~s~~la~~V~~ev~~ql~ 290 (434)
T 1kae_A 265 -----DSQVILLTPAADMARRVAEAVERQLA 290 (434)
T ss_dssp -----TCEEEEEESCHHHHHHHHHHHHHHHT
T ss_pred -----CCcEEEEECCHHHHHHHHHHHHHHHH
Confidence 2345666554 34444444444444
No 57
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=52.84 E-value=41 Score=28.27 Aligned_cols=57 Identities=23% Similarity=0.270 Sum_probs=40.8
Q ss_pred hcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 229 aaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
..||-+|+|..|- .+..++.++...++|+ ++..+.|++ + .++.+-+.+.+..+.+..
T Consensus 89 ~~~n~vVikT~PG---~A~~va~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 89 GTGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp EETTEEEEEESTT---CHHHHHHHHHHHTCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred ecCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEeCCHHHHHHHHHHH
Confidence 4799999998865 5888999999998876 899998842 2 234445555555555543
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=51.98 E-value=35 Score=28.84 Aligned_cols=114 Identities=17% Similarity=0.116 Sum_probs=75.4
Q ss_pred eEEEEEcCcC-hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH-cCCCCCeEEEecC-CchHHHHHHHcCC
Q 012802 205 GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 281 (456)
Q Consensus 205 GVv~~i~p~n-~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~g-~~~~~~~~L~~~~ 281 (456)
|.|+++..-+ =+-...+.+-...++.|..++--.. |+ +.|.+ .|+|-..++=++. ..+++++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~g-----Ta----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGT-----TG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEETT-----HH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEccH-----HH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 6555554443 3555555666667778998886332 44 45555 7999776664443 23456666665 6
Q ss_pred CccEEEEeCC-------hHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCC
Q 012802 282 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (456)
Q Consensus 282 ~v~~V~ftGS-------~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G 344 (456)
.||.|.||-+ ..-+..|.+.|.. +-+|+..- -..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~---------------latA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATN---------------VATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESS---------------HHHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeC---------------HHHHHHHHHHHhcccc
Confidence 8999999876 4577889999887 55777643 2456777778777764
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.92 E-value=31 Score=28.69 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=50.8
Q ss_pred CCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC-c----hHHHHHHHcCCCccEEEEeCCh-----HHHHHHHH
Q 012802 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQ 300 (456)
Q Consensus 231 GN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~----~~~~~~L~~~~~v~~V~ftGS~-----~~g~~i~~ 300 (456)
|-.++-- .-| ++.|.+.|+|-..++-++.. . +++.+.+.+ ..|+.|.+|-+. ..+..|.+
T Consensus 50 Gf~i~AT-----~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 50 GFKLFAT-----EAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TCEEEEE-----HHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCEEEEC-----chH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHH
Confidence 7776642 223 45667899998777776643 2 567776665 589999998665 37888888
Q ss_pred HHhhCCCCcEEEec
Q 012802 301 LAAKSNLKPVTLEL 314 (456)
Q Consensus 301 ~aa~~~~~pv~lel 314 (456)
.|.. +.+|++..+
T Consensus 120 ~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 120 TAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHH-TTCCEECSH
T ss_pred HHHH-hCCCeEcCH
Confidence 8887 557877543
No 60
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=46.80 E-value=34 Score=24.77 Aligned_cols=56 Identities=23% Similarity=0.271 Sum_probs=40.1
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
.||-+|+|..|- .+..++.++.+.++|+ ++..+.|++ + .+...-+.+.+..+.+..
T Consensus 12 ~~n~vVikT~pG---~A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 699999998855 5888999999998876 899888742 2 234445555555555543
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=45.93 E-value=12 Score=31.16 Aligned_cols=83 Identities=16% Similarity=0.130 Sum_probs=52.9
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH-cCCCCCeEEEec-CCchHHHHHHHcCCCccEEEEeCC-----
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS----- 291 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~-g~~~~~~~~L~~~~~v~~V~ftGS----- 291 (456)
..+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++ +..+++++.+.+ ..||.|.||-+
T Consensus 19 v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~~ 88 (134)
T 2xw6_A 19 VAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTAQ 88 (134)
T ss_dssp HHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTCC
T ss_pred HHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccCC
Confidence 333444445556776664 22343 45555 799977766555 434566666665 68999999977
Q ss_pred --hHHHHHHHHHHhhCCCCcEEE
Q 012802 292 --TTTGKIVLQLAAKSNLKPVTL 312 (456)
Q Consensus 292 --~~~g~~i~~~aa~~~~~pv~l 312 (456)
...+..|.+.+.. +-+|+..
T Consensus 89 ~h~~D~~~IrR~A~~-~~IP~~T 110 (134)
T 2xw6_A 89 PHEPDVQALLRVCDV-HGVPLAT 110 (134)
T ss_dssp TTSCCSHHHHHHHHH-HTCCEEC
T ss_pred CccchHHHHHHHHHH-cCCCeEc
Confidence 3456778888877 4467654
No 62
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=45.73 E-value=37 Score=25.16 Aligned_cols=36 Identities=33% Similarity=0.574 Sum_probs=30.5
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
++|-+|+|..|- .+..++.++.+.++|+ ++..+.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999998855 5888999999998876 89988874
No 63
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=40.29 E-value=35 Score=25.57 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=30.4
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
.||-+|+|..|- .+..++.++.+.++|+ ++..+.|+
T Consensus 24 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPG---NAQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999998855 5888999999997776 88888874
No 64
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=39.84 E-value=90 Score=21.48 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 012802 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET 152 (456)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 152 (456)
.+.++.+..+++--.|.+.|+|... .+|+-+...|.+-++.++.-+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4566777777777778888999765 5788888888888888887553
No 65
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=39.45 E-value=18 Score=32.87 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=45.2
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~ 296 (456)
+..++-.+.+||-||++.+... ....+..+|..- +|.|++++++.. .+ ....-....+.+..+...-.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~~--~~~s~~~~L~~l-LP~~c~~l~~~s-~~----Y~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDVD--LVQSAFEVLRTM-LPVGCVRIIPYS-SQ----YEEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCHH--HHHHHHHHHGGG-SCGGGCCEEEEE-SS----CCCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCCHH--HHHHHHHHHHHh-CCHHHHhccccc-hh----hcchhheeeecCCCCcccCc
Confidence 4556778889999999987643 555566777776 999999998642 21 12223456666666655443
No 66
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=39.36 E-value=26 Score=26.01 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=31.8
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
.||-+|+|..|- .+..++.++.+.+.+++++..+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 699999998755 5888999999887889999999884
No 67
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=35.38 E-value=43 Score=29.09 Aligned_cols=122 Identities=17% Similarity=0.072 Sum_probs=79.5
Q ss_pred EEEEEccc-eEEEEEcCcC-hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH-cCCCCCeEEEecC-CchH
Q 012802 197 VQTLHEPI-GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPT 272 (456)
Q Consensus 197 ~~~~~~P~-GVv~~i~p~n-~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~g-~~~~ 272 (456)
......|. |.|+++..-+ =+-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++. ..++
T Consensus 19 ~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 19 RYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHH
T ss_pred ceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCch
Confidence 34444554 7666665544 3555556666677778998875 23344 55555 7999666654443 2345
Q ss_pred HHHHHHcCCCccEEEEeCC-------hHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCC
Q 012802 273 AGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (456)
Q Consensus 273 ~~~~L~~~~~v~~V~ftGS-------~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G 344 (456)
+++.+.+ ..|+.|.||-+ ..-+..|.+.|.. .-+|+..- -..++.++.+.+++..
T Consensus 90 I~d~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tn---------------latA~A~v~ail~~~~ 151 (178)
T 1vmd_A 90 IGAMIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAIT---------------RSTADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESS---------------HHHHHHHHHSGGGGSC
T ss_pred HHHHHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeC---------------HHHHHHHHHHHhcccc
Confidence 6666655 68999999876 3457889998887 55777643 2456778888887764
No 68
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=31.17 E-value=23 Score=30.33 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHc---CCCccEEEEeCChHHH
Q 012802 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 295 (456)
Q Consensus 243 p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~---~~~v~~V~ftGS~~~g 295 (456)
-.....+.+.|.+.|+..-...+++.+...+...|.+ ..+.|.|..||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3466788899999998766667777654555555433 2368999999988654
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=31.13 E-value=33 Score=29.25 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcC--CCccEEEEeCChHHHH
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~--~~v~~V~ftGS~~~g~ 296 (456)
.....+.+++.+.|+..-...+++.+ +.+...|.+. .+.|.|..||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 36678889999999877667788876 6666665442 3589999999886554
No 70
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=29.24 E-value=86 Score=26.68 Aligned_cols=53 Identities=26% Similarity=0.117 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHH---cCCCccEEEEeCChHHH
Q 012802 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 295 (456)
Q Consensus 243 p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~---~~~~v~~V~ftGS~~~g 295 (456)
-....+|++.|.+.|+.--...+++.+...+..++. .....|.|..||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 346788999999999876666777665445554443 34568999999987643
No 71
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=29.05 E-value=57 Score=26.58 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=31.7
Q ss_pred CeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
|.+++++|+..+.-......+++.+|.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 57888878665544344333579999999998888888777765
No 72
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=28.49 E-value=63 Score=25.95 Aligned_cols=80 Identities=5% Similarity=-0.014 Sum_probs=49.7
Q ss_pred HHHHHHhccCCCcccC--CceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc-------cccCCCHHHHHHHHHHHHH
Q 012802 334 LAHYALFFNQGQCCCA--GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ-------QGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 334 ~i~~~~~~~~GQ~C~a--~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~-------~Gp~i~~~~~~~~~~~i~~ 404 (456)
..+.......+-.|.. ....|++.+.++++.+++.+.+..+.--+|+.++.. ..|-.+...+ ...++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~---~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVY---QALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHH---HHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHH---HHHHHH
Confidence 4444444444444443 234489999999999999999998655566655432 2232344443 456677
Q ss_pred HhhCCCEEEeCC
Q 012802 405 GVDGGAKLETGG 416 (456)
Q Consensus 405 a~~~Ga~v~~gg 416 (456)
.+++|.....|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 777887666665
No 73
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=28.00 E-value=35 Score=29.79 Aligned_cols=55 Identities=25% Similarity=0.178 Sum_probs=39.7
Q ss_pred ChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcC--CCccEEEEeCChHHHH
Q 012802 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (456)
Q Consensus 242 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~--~~v~~V~ftGS~~~g~ 296 (456)
.-.....+.+++.+.|...-...+++.+...+...|... .+.|.|..||++..+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 334677889999999987666777876555555555442 4689999999987654
No 74
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=23.90 E-value=24 Score=34.93 Aligned_cols=68 Identities=15% Similarity=0.231 Sum_probs=36.6
Q ss_pred cCCEEE-------eecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHc-CCCccEEEEeCChHHHHH
Q 012802 230 CGNTIV-------LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS-HMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 230 aGN~VV-------lkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~-~~~v~~V~ftGS~~~g~~ 297 (456)
+||-++ +++...--.....|..++.+.|...-.+.+++.+...+...|.+ ....|.|..||++..|..
T Consensus 190 tGdEl~~~~g~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~~ 265 (396)
T 1wu2_A 190 TGSELIEEPSEEGFKEGKIVETNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGDK 265 (396)
T ss_dssp ECTTEESSCCHHHHHTTCEECCHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC--------
T ss_pred cCcccccCCCCcccCCCcEecchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCChh
Confidence 466555 34444333456778899999988665566776544443333322 124799999999987753
No 75
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=21.42 E-value=71 Score=22.31 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 012802 120 PWPRMTAYERSKIILRFADLLERHNDEIA 148 (456)
Q Consensus 120 ~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (456)
.|..++.++|..+.......-+++..++.
T Consensus 36 ~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 36 NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999888887777766654
No 76
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=20.48 E-value=57 Score=28.16 Aligned_cols=57 Identities=23% Similarity=0.081 Sum_probs=39.1
Q ss_pred CCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHc---CCCccEEEEeCChHHHH
Q 012802 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 240 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~---~~~v~~V~ftGS~~~g~ 296 (456)
...-.....+++.+.+.|...-...+++.+...+...|.+ ..+.|.|..||++..+.
T Consensus 36 ~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3344567788999999998766666777655555555543 22489999999876554
Done!