BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012806
(456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/374 (60%), Positives = 278/374 (74%), Gaps = 1/374 (0%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
++ Y + IN ++ DA S KTFP +P T +VI +VAEGD D+DRAV AR AF G P
Sbjct: 15 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W +M ER R++ R ADLIE++ LAALET +NGKPY+ S ++ MV++ L YYAGW
Sbjct: 75 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 134
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
ADK HG T+P DG+Y T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AE
Sbjct: 135 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
QTPLTALYVA L EAG PPGV+NV+ G+GPTAGAA+ASH DVDK++FTG + G ++Q
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A KSNLK VTLE+GGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
EFVE++ ARA R+VG+PF S EQGPQ+D QF+KVL YI+SG E L CGG
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAA 374
Query: 413 NRGYFVQPTVFSDV 426
+RGYF+QPTVF D+
Sbjct: 375 DRGYFIQPTVFGDL 388
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 17 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 137 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 196
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 197 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 256
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 257 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 316
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 317 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 376
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 377 PTVFGDV 383
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 216/378 (57%), Positives = 283/378 (74%), Gaps = 1/378 (0%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
P ++I YTK IN ++ ++ SG+ FPV +P T E + V E D DID+AV AR AF
Sbjct: 12 PNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSL 71
Query: 111 GP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
G W +M ER R++ + ADL+E++ LA +E+ N GKP++Q+ ++ V++ L YY
Sbjct: 72 GSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYY 131
Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
AGWADKIHG+T+P DG+Y T HEPIGV GQI+PWNFPLL+FTWK+APAL CGNT+V+K
Sbjct: 132 AGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIK 191
Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
AEQTPL+ALY+ L EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG + GK+
Sbjct: 192 PAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKL 251
Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
+QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH +F+NQGQCC AGSR +V E
Sbjct: 252 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 311
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
+Y+EFV+++ RA RRIVG PF EQGPQID +Q+ K+L I+SG+ A LECGG
Sbjct: 312 SIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK 371
Query: 410 RLGNRGYFVQPTVFSDVT 427
LG +G+F++PTVFS+VT
Sbjct: 372 GLGRKGFFIEPTVFSNVT 389
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++F G + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/367 (60%), Positives = 272/367 (74%), Gaps = 1/367 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTL+LGGKSP II DAD+D AVE AHFALF+NQGQ C AGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
ARA R+VG+PF S EQGPQ+D QF+K+L YI +G + A L CGG +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
PTVF DV
Sbjct: 383 PTVFGDV 389
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 273/376 (72%), Gaps = 1/376 (0%)
Query: 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
+Q YTK IN ++ + SGK FPV++P T E + V EGD ED+D+AV AR+AF G
Sbjct: 16 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
PW M ER R++ + ADLIE++ LA +E N GK + + ++ ++ L Y AG
Sbjct: 76 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
WADKI G T+P DGN+ T EP+GV GQI+PWNFPLL+F WK+ PAL+CGNT+V+K A
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
EQTPLTAL++ L EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG + GK+++
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
E A KSNLK V+LELGGKSP I+F DAD+D AVE AH +FY+QGQCC A SR +V E +
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
YDEFV ++ RA + ++G+P GV QGPQID EQ++K+L I SG + A LECGG
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 412 GNRGYFVQPTVFSDVT 427
GN+GYF+QPTVFSDVT
Sbjct: 376 GNKGYFIQPTVFSDVT 391
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/376 (53%), Positives = 265/376 (70%), Gaps = 1/376 (0%)
Query: 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
++I +TK IN ++ ++ SGKTFPV++P T E I V E D ED+D+AV AR+AF G
Sbjct: 16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGS 75
Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
PW M ER +++ + ADLIE++ LA LE+ N GK + + ++ ++ L Y AG
Sbjct: 76 PWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAG 135
Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
WADKI G T+P DG + T HEPIGV G I PWN P++L K+ PAL CGNT+++K A
Sbjct: 136 WADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
EQTPLTAL+VA L EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG + GK++Q
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQ 255
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
E AAKSNLK VTLELG K+P I+F DAD+D AVE AH +F NQGQ C A S+ +V E +
Sbjct: 256 EAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAI 315
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
YDEFV+++ RA + + G+P GV GPQI+ Q K++ I SG + A LECGG
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPW 375
Query: 412 GNRGYFVQPTVFSDVT 427
GN+GYF+QPTVFS+VT
Sbjct: 376 GNKGYFIQPTVFSNVT 391
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 235/370 (63%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+LELGGKSP IIF D D+++AV++ ++F+N+G+ C A R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 235/370 (63%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+L+LGGKSP IIF D D+++AV++ ++F+N+G+ C A R +V E ++++FV
Sbjct: 280 SNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 324 bits (830), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+L LGGKSP IIF D D+++AV++ ++F+N+G+ C A R +V E ++++FV
Sbjct: 280 SNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+LELGGKSP IIF D D+++AV++ ++F+N+G+ A R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+LELGGKSP IIF D D+++AV++ ++F+N+G+ A R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 233/370 (62%), Gaps = 4/370 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G+FVDA KT+ +P VI V+ D+D+AVA A++AF+ G W K+ +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R++ R AD++E++ EELA +E + G Y +LK+ V M ++ Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+P + N ++ T EP+GV G ++PWN+PL++ +WK A L GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+P GV+N++ G G G L+ H DV K+ FTG + GK + + A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
SN+K V+L LGGKSP IIF D D+++AV++ ++F+N+G+ A R +V E ++++FV
Sbjct: 280 SNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
+K + +G+P + GPQ +K++ Y + G++ ATL CGG+++ G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 291 bits (746), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 7/392 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K I G++V+A+SG TF +P EV+A V ED++RAV +A + + W MT
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+RSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAG+P GV NV++G G G L H ++K+SFTG TGK V A+ S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP IIF DAD+D+A ++A A F++ GQ C G+R ++H F K
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
R R +GDP GP + + VL YI SG A L CGG+R+ + +
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
G +V PTVF+D I + P+ S ++
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 396
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 291 bits (746), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 7/392 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K I G++V+A+SG TF +P EV+A V ED++RAV +A + + W MT
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+RSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG I G
Sbjct: 66 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAG+P GV NV++G G G L H ++K+SFTG TGK V A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP IIF DAD+D+A ++A A F++ GQ C G+R ++H F K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
R R +GDP GP + + VL YI SG A L CGG+R+ + +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
G +V PTVF+D I + P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K I G++V+A+SG TF +P EV+A V ED++RAV +A + + W MT
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+RSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAG+P GV NV++G G G L H ++K+SFTG TGK V A+ S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ LGGKSP IIF DAD+D+A ++A A F++ GQ C G+R ++H F K
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
R R +GDP GP + + VL YI SG A L CGG+R+ + +
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
G +V PTVF+D I + P+ S ++
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 396
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K I G++V+A+SG TF +P EV+A V ED++RAV +A + + W MT
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+RSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG I G
Sbjct: 66 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAG+P GV NV++G G G L H ++K+SFTG TGK V A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP IIF DAD+D+A ++A A F++ GQ G+R ++H F K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
R R +GDP GP + + VL YI SG A L CGG+R+ + +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
G +V PTVF+D I + P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K I G++V+A+SG TF +P EV+A V ED++RAV +A + + W MT
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+RSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG I G
Sbjct: 66 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAG+P GV NV++G G G L H ++K+SFTG TGK V A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP IIF DAD+D+A ++A A F++ GQ G+R ++H F K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
R R +GDP GP + + VL YI SG A L CGG+R+ + +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
G +V PTVF+D I + P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 220/377 (58%), Gaps = 10/377 (2%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I+G++ + PV +P T E+I ++ AED++ AV AR+AF W +
Sbjct: 11 FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-- 178
R+ + A I + + LET ++GKP+ +++ ++ V Y+AG A+ + G
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGKQ 129
Query: 179 ---LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
+T+P + + L +P+GV G I PWN+PLL+ TWK+APAL G T VLK +E
Sbjct: 130 KAPVTLPME-RFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
+T L ++ +E GLPPGVLN+++G GP AGA L SH DVDK++FTG TG V AA
Sbjct: 189 VTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAA 248
Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
+ +KPVTLELGGKSP ++F+D D+D+ VE F F+ GQ C A SR VHE + EF
Sbjct: 249 QL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEF 307
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-- 413
V+K + DPF+ G GP I Q+ K++++I + AT+ GG R +
Sbjct: 308 VDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLK 367
Query: 414 RGYFVQPTVFSDVTVSF 430
+GY+++PT+ +D++ S
Sbjct: 368 KGYYIEPTIVTDISTSM 384
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 225/375 (60%), Gaps = 17/375 (4%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+ I G+FV + SG+TFP DP T EV+ A G ++DRA A +AF W +
Sbjct: 29 HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAK 86
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHG 178
ER R +LR A+LIEK+ +ELA +E + G+ ++ ++++V +YA +A+ +
Sbjct: 87 ERKRYLLRIAELIEKHADELAVMECLDAGQ-VLRIVRAQVARAAENFAFYAEYAEHAMED 145
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
T P D ++ T+ P G G I PWN PL+L TW++APAL GNT+VLK AE +P TA
Sbjct: 146 RTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTA 205
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
+A++ EA LPPGV N+V G+G AGAAL +H V L+ TG +TGKIV AA +
Sbjct: 206 TKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DH 264
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK ++ ELGGKSP ++F DAD+++A++ F +F G+ C A SR V E+++++FV K
Sbjct: 265 LKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGK 324
Query: 359 A--KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---- 412
+ARA+R VG P E GP I PE Q+VL Y+ +G A L GG+R
Sbjct: 325 VVERARAIR--VGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFR 382
Query: 413 ----NRGYFVQPTVF 423
+RG ++ PTVF
Sbjct: 383 GEDLSRGNYLLPTVF 397
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 212/373 (56%), Gaps = 12/373 (3%)
Query: 60 NLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
N G+ + + G T PV++P T V+ + AE++D+AV +A+ A+ + W KM
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAG 79
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ERSR+ML AA +I + + +A LE NNGK ++ + ++ + + YYAG A + G
Sbjct: 80 IERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG 138
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+ G T EP+GV I+ WN+P ++ WK APAL CGN +V K + TP+T
Sbjct: 139 QHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
+ +A++FHEAG+P G++NVV G G G+ L H +V K+SFTG TGK V E++AK+
Sbjct: 199 VILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT- 256
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
+K VTLELGGKSP +IF D +++ AV A A F QGQ C G+R +V + +F+E+
Sbjct: 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEE 316
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG------ 412
R +VGDP + G I Q KVL ++ + A + CGG+ L
Sbjct: 317 VVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKL 376
Query: 413 NRGYFVQPTVFSD 425
GYF+ P V +
Sbjct: 377 KNGYFMSPCVLDN 389
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 216/388 (55%), Gaps = 9/388 (2%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
LING+++DA +G+ V +P + + +V + A++ A+ A +A W +T E
Sbjct: 13 LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ +L+ ++ ++LA L T GKP ++ K E+ + ++A +I+G T
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 129
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+PG + + + +PIGV I PWNFP + T K PAL G T+VLK A QTP +AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+A+L AG+P GV NVV+G G L S+ V KLSFTG + G+ + E AK ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 248
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K V+LELGG +PFI+FDDAD+D+AVE A + F N GQ C +R YV + VYD F EK
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
+ + +GD +GV GP ID + KV +I +E A + CGG G F Q
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ 368
Query: 420 PTVFSDV----TVSFISLLQFLIPIFSF 443
PT+ DV VS L P+F F
Sbjct: 369 PTILVDVPANAKVSKEETFGPLAPLFRF 396
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 216/388 (55%), Gaps = 9/388 (2%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
LING+++DA +G+ V +P + + +V + A++ A+ A +A W +T E
Sbjct: 13 LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ +L+ ++ ++LA L T GKP ++ K E+ + ++A +I+G T
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 129
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+PG + + + +PIGV I PWNFP + T K PAL G T+VLK A QTP +AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+A+L AG+P GV NVV+G G L S+ V KLSFTG + G+ + E AK ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 248
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K V+LELGG +PFI+FDDAD+D+AVE A + F N GQ C +R YV + VYD F EK
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
+ + +GD +GV GP ID + KV +I +E A + CGG G F Q
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ 368
Query: 420 PTVFSDV----TVSFISLLQFLIPIFSF 443
PT+ DV VS L P+F F
Sbjct: 369 PTILVDVPANAKVSKEETFGPLAPLFRF 396
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 211/372 (56%), Gaps = 9/372 (2%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+ I+G +V+ +G F P T E+IA + ++RA+A+A++A E W M+P
Sbjct: 17 HFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKE--WAAMSPM 74
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA-DKIHG 178
R RI+ RAAD++ + + L+ LET + GKP +++ ++ ++ G A ++G
Sbjct: 75 ARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNG 134
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P G++ T P+GV I WN+P + WK APAL GN +V K +E TPL A
Sbjct: 135 DYIPLGGDFAY-TKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGA 193
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A++ EAGLP G+ NV+ G T G L +H DV K+S TG TG+ V AA +
Sbjct: 194 LKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAA-AAAGH 251
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP I+FDDAD++ AV A FY+ GQ C G+R +V ++ F+E
Sbjct: 252 LKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLEN 311
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG---DRLGNRG 415
K R I+GDP GP + Q +KVL YI G ATL GG + + G
Sbjct: 312 LKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEG 371
Query: 416 YFVQPTVFSDVT 427
+VQPTVF+DVT
Sbjct: 372 AYVQPTVFADVT 383
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 215/380 (56%), Gaps = 13/380 (3%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP---WPKMT 117
ING + K PV +P T +I ++ ED+D AVA A+ A W +
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
R+R + A + + ELA LE+ + GKP ++ ++ V YYA A+K+
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLD 129
Query: 178 G-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
+++P D + L EPIGV G I PWN+P+L+ TWKVAPAL G +LK +E
Sbjct: 130 ARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
LT L + ++ E GLPPGVLN+++G GP AGA LA+H DVDK++FTG TG +
Sbjct: 189 LASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMT 248
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
AA+ +KPV+LELGGKSP ++F+D D+D+A E A F F+ GQ C A SR +HE +
Sbjct: 249 AAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIA 307
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
EF+ + + DP + G GP + Q++K+L+++ + AT+ GG R
Sbjct: 308 TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE 367
Query: 413 N--RGYFVQPTVFSDVTVSF 430
+ +G+F++PT+ +DVT +
Sbjct: 368 HLKKGFFIEPTIITDVTTNM 387
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 219/388 (56%), Gaps = 13/388 (3%)
Query: 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
+ +S + I+G++ K P +P T +I ++ ED+D AV A++A
Sbjct: 3 ITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKN 62
Query: 112 --PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
W + R+R + A I++ +EL LE+ + GKP ++L +++ VV YY
Sbjct: 63 GRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEAL-ADLDDVVACFEYY 121
Query: 170 AGWADKIHG-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224
AG A+++ +++P D + L EPIGV I PWN+P L+ TWK+APAL G
Sbjct: 122 AGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGC 180
Query: 225 TIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHC 284
+LK +E +T L + ++ E GLP GVLN+V+G G AGA+LASH DVDK+SFTG
Sbjct: 181 AAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSS 240
Query: 285 DTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR 344
TG + AA+ +KPV+LELGGKSP ++F+D D+D+ E F F+ GQ C A SR
Sbjct: 241 ATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSR 299
Query: 345 TYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL 404
VHE + EFV+K A + DP + G GP + Q++KVL I S AT+
Sbjct: 300 LIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATI 359
Query: 405 ECGGDRLGN--RGYFVQPTVFSDVTVSF 430
GG R + +GYFV+PT+ +DVT S
Sbjct: 360 LTGGRRPEHLKKGYFVEPTIITDVTTSM 387
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 214/377 (56%), Gaps = 7/377 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
+ I+G++V++A+ T + +P EVI V+EG ED +RA+ AR+AF+ G W + T
Sbjct: 34 RQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETA 93
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
R + + AD I+++ E LA LET + GK +S +++ + + Y+AG ADK G
Sbjct: 94 ETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGG 152
Query: 179 LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
+ + + + EP+GV QI PWN+PLL +WK+APAL G ++V+K +E TPLT
Sbjct: 153 EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
+ V +L E G P G +N++ G G G ++ H +VD +SFTG +TGK + + AA +
Sbjct: 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-N 271
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
N+ + LELGGK+P IIFDDAD + AV+ A +++ GQ C AGSR V + D+F +
Sbjct: 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQ 331
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----N 413
R + +G+ F + E GP I E K+ Y+ AT+ GG R
Sbjct: 332 ALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLK 391
Query: 414 RGYFVQPTVFSDVTVSF 430
G F +PTV ++ S
Sbjct: 392 DGLFFEPTVITNCDTSM 408
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/389 (38%), Positives = 221/389 (56%), Gaps = 13/389 (3%)
Query: 52 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG 111
P + + ++G++ A G+ PV +P T I + G AED+D AVA AR A
Sbjct: 19 PAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRN 78
Query: 112 ---PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168
W + R++ + A + + ELA LE + GKPY ++ ++ V Y
Sbjct: 79 RGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEA-AWDMDDVAGCFEY 137
Query: 169 YAGWADKIHG-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCG 223
+A A+ + +++P + + EPIGV G I PWN+PLL+ TWK+APAL G
Sbjct: 138 FADQAEALDKRQNSPVSLPME-TFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAG 196
Query: 224 NTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH 283
T VLK +E +T L +A + E GLP GVLN+V+G GP AGA L++H DVDK++FTG
Sbjct: 197 CTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGS 256
Query: 284 CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGS 343
+TGK + AA +KPVTLELGGKSP ++FDD D+D+AVE F F+ GQ C A S
Sbjct: 257 FETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATS 315
Query: 344 RTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT 403
R +H ++ +F E+ A A V DP + G GP + Q++K+ ++I + AT
Sbjct: 316 RLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGAT 375
Query: 404 LECGGDRLGN--RGYFVQPTVFSDVTVSF 430
+ GG R + +G+F++PT+ +D+T S
Sbjct: 376 ILTGGVRPAHLEKGFFIEPTIITDITTSM 404
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 215/392 (54%), Gaps = 9/392 (2%)
Query: 46 EEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATAR 105
++P V I + I G++ + P+ +P T E+I ++ AED+D AV AR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 106 KAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
KA W T +R++ + A + + LA LE+ ++GK +S +++ V
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYES-AADMDDVAGC 130
Query: 166 LHYYAGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
YYAG A+ + + +Y L EP+GV G I PWN+PLL+ WKVAPAL
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
G +LK +E +T L + ++ E GLP G LN+++G GP AG LASH VDK+SFT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFYNQGQCCC 340
G TG + AA+ +KPV+LELGGKSP ++FDD D +D A E F +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 341 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES 400
A SR V E + F+++ + DP + + GP + Q++KVL++I +
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 401 NATLECGGDRLGN--RGYFVQPTVFSDVTVSF 430
AT+ CGG+R + +GY+VQPT+ +DV S
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSM 401
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 9/392 (2%)
Query: 46 EEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATAR 105
++P V I + I G++ + P+ +P T E+I ++ AED+D AV AR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 106 KAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
KA W T +R++ + A + + LA LE+ ++GK +S +++ V
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYES-AADMDDVAGC 130
Query: 166 LHYYAGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
YYAG A+ + + +Y L EP+GV G I PWN+PLL+ WKVAPAL
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
G +LK +E +T L + ++ E GLP G LN+++G GP AG LASH VDK+SFT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFYNQGQCCC 340
G TG + AA+ +KPV+L LGGKSP ++FDD D +D A E F +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 341 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES 400
A SR V E + F+++ + DP + + GP + Q++KVL++I +
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 401 NATLECGGDRLGN--RGYFVQPTVFSDVTVSF 430
AT+ CGG+R + +GY+VQPT+ +DV S
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSM 401
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 219/375 (58%), Gaps = 5/375 (1%)
Query: 56 SYTKNLINGQFVDAASGKTFPVYDPRTA-EVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
S + L++G+ VDAASG T P A EV+ E A+D+ +AVA ARKAFD GPWP
Sbjct: 21 SRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWP 80
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
+ + ERSR+ + ADLI EELA +E+ GKP Q+ + E+ L Y AG A
Sbjct: 81 RXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQAR 139
Query: 175 KIHGLTVPGDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
+ G T G+ + L EP+GV G I PWNFP ++ + +V A+ G T+VLK +E
Sbjct: 140 ALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEF 199
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
T T++ +A+L EAG+P GV NVV+GYG AG LA +VD ++FTG G + E+
Sbjct: 200 TSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEI 259
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
AA++ +K V LELGGK P I+F DAD+D A + + +++N GQCC +GSR V E + D
Sbjct: 260 AART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRD 318
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
E+ + + GDP + G I +KV Y+ +GI S A L GG+R+G
Sbjct: 319 ALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGR 378
Query: 414 R-GYFVQPTVFSDVT 427
G + PTVF+ VT
Sbjct: 379 EAGLYYAPTVFAGVT 393
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 204/388 (52%), Gaps = 11/388 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAE-GDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I G++ A S TF V+DP T E + V + G AE A W T E
Sbjct: 17 IGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG---WRMKTAKE 73
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ R DL+ N ++LA + T GKP ++ K E+ + ++A ++ G T
Sbjct: 74 RAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDT 132
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+P D N I + EPIGV I PWNFP + KV PAL G IV+K AE TP +AL
Sbjct: 133 LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+A L AG+P GVL+VV G G + S+ V KLSFTG G+++ +A + +
Sbjct: 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT-V 251
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K +TLELGG +PFI+FDDAD+D AVE A + + N GQ C +R +VHERVYD F +K
Sbjct: 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKL 311
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
A + VG +SG GP I+ +KV +I + A+L GG R F +
Sbjct: 312 AAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFE 371
Query: 420 PTVFS----DVTVSFISLLQFLIPIFSF 443
PTV + D+ V+ L P+F F
Sbjct: 372 PTVLTGVKPDMDVAKEETFGPLAPLFRF 399
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 212/388 (54%), Gaps = 11/388 (2%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
L+NG+++DAA G T V +P VI V I A+ + KA W T E
Sbjct: 36 LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKE 93
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ + DLI N +++A + T GKP ++ + EV + ++A A +++G T
Sbjct: 94 RAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 181 VPGDGN-YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+P N + + +P+GV I PWNFP + T K APAL G T++++ A+ TPLTAL
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+ L +AG+P GVL +V+G GA L S+ V KLSFTG + G+++ A + +
Sbjct: 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT-I 271
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K ++LELGG +PFI+FDDAD+D AV+ A + + N GQ C +R YV VYD+F EK
Sbjct: 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKL 331
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
A+ VG+ + GV GP I+ + KV +I + A L GG LG G F +
Sbjct: 332 AAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFE 389
Query: 420 PTVFSDVTVSFISLLQF----LIPIFSF 443
P + + VT + + L P+F+F
Sbjct: 390 PGILTGVTSDMLVAKEETFGPLAPLFAF 417
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 204/377 (54%), Gaps = 17/377 (4%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T+ LI +F +A + + +PRT I ++AE ID AV A +AF W + T
Sbjct: 26 TQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P ERS +L+ AD IEK +E AALE N GKP E+P ++ ++AG +H
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 178 GLTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
P G Y H + +PIG+ G I PWN+PL WK+APA+ GNT+V K +EQ
Sbjct: 143 ---APAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQ 199
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
TPLTAL +A+L + LP GV+NV++G G T G AL +H V +S TG TGK V
Sbjct: 200 TPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
AAK+ +K LELGGK+P I++ DAD++ V +YN GQ C A R Y +Y+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 354 EFVEK--AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI-RSGIESNATLECGGDR 410
+ V + +R + D ++ E GP I Q +V ++ R+ + + + GG
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTEN--EIGPLISRRQRDRVASFVERAADQKHIEITTGGRT 375
Query: 411 LGNRGYFVQPTVFSDVT 427
+ G+F QPTV + T
Sbjct: 376 GSDEGFFFQPTVVAGAT 392
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 204/371 (54%), Gaps = 13/371 (3%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K LING+ V + G+ PVY+P T +V+ +AE AE +D AV A AF E W + TP
Sbjct: 25 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTP 81
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
R+ +L+ AD+IE+N + A LE+ N GKP + E+P +V + ++AG A ++G
Sbjct: 82 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 179 LTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
L H + +P+GV I PWN+PL++ WK+APAL GN +VLK +E TPLT
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
AL +A+L + P GV+N++ G G T G L H V +S TG TG+ + A S
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-S 259
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
++K +ELGGK+P I+FDDAD++ VE +YN GQ C A R Y + +YD VE
Sbjct: 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 319
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT----LECGGDRLGN 413
K A G P E GP ++V + + E+ AT + GG++
Sbjct: 320 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE---EAKATGHIKVITGGEKRKG 376
Query: 414 RGYFVQPTVFS 424
GY+ PT+ +
Sbjct: 377 NGYYYAPTLLA 387
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 205/379 (54%), Gaps = 7/379 (1%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
P ++ K ING + D ++ V DP T E A ++ G D D+A+ A+KAF
Sbjct: 19 PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ- 77
Query: 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170
W +P+ER + + ++ EK ++A + G P +L ++ + +
Sbjct: 78 -TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFI 136
Query: 171 GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230
+ +GN ++ IGV G I PWN+P+ T KV PAL G T+VLK
Sbjct: 137 KAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKP 196
Query: 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290
+E PL+A+ A++ EA LP GV N+++G G G+ L++H D++ +SFTG GK +
Sbjct: 197 SEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256
Query: 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
+ A+ + LK V LELGGK IIF DAD+D A++ FYN GQ C A +R V +
Sbjct: 257 SKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
+YD+ ++ AK A + VG ++G GP + EQ+ K+ I+SGI+ ATL GG
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 411 L---GNRGYFVQPTVFSDV 426
L RGY+V+PTVF+DV
Sbjct: 375 LPMGMERGYYVRPTVFADV 393
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 213/412 (51%), Gaps = 27/412 (6%)
Query: 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
YTK ING++V++ S +T V +P T EVI VA+G+ D+D+AV A + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
+ ER ++ + E +++ T G P SL V L H+ A D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQXGLNHFVAA-RDA 120
Query: 176 IHGLTVPGDGNYHIQ-------TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228
+ NY + + E IGV+G I PWNFP + K+A A G+ +VL
Sbjct: 121 LD--------NYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVL 172
Query: 229 KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK 288
K +E+TP A+ +A++F + G+P GV N+V+G G G L+ H V SFTG TG
Sbjct: 173 KPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGS 232
Query: 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
+ E AAK + K V+LELGGKSP+I+ DD D+ +A + + N GQ C AG+R V
Sbjct: 233 KIXEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
++ D F+ + K + + VG+P + G + GP I +QF +V YI GIE A L GG
Sbjct: 292 NKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
Query: 409 ----DRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFIILCVVTDCTSI 455
+ L +GYF +PT+F +V I+ + P+ S I + + I
Sbjct: 352 PGKPEGL-EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQI 402
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 208/412 (50%), Gaps = 25/412 (6%)
Query: 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
Y K I G++ ++ V P T E + V A D+D AVA AR AFD GPWP
Sbjct: 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPST 67
Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH--------- 167
P+ER+ ++ A ++ + + L G+P P ++ +H
Sbjct: 68 PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP---------PTIIETMHWMGSMGAMN 118
Query: 168 YYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
Y+AG ADK+ T G+Y + EP+GV G IV WN PL L K+APAL G TI
Sbjct: 119 YFAGAADKVT-WTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTI 177
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
VLK A +TPLTA +A++F E GLP GVL+VV G G G AL S+ D+D +FTG
Sbjct: 178 VLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAV 236
Query: 287 GKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY 346
G+ V AA+ LKP TLELGGKS II +D D+ A+ + F+ N GQ C +R
Sbjct: 237 GREVGRRAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL 295
Query: 347 VHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC 406
YDE V VG P + GP I +Q +V YI GIE A L C
Sbjct: 296 APRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVC 355
Query: 407 GGDRLG--NRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFIILCVVTDCTSI 455
GG R + G+F+QPTVF+DV I+ + P+ + I D +I
Sbjct: 356 GGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAI 407
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+GQFV V +P T VI+ + +G AED +A+ A +A E W + ER
Sbjct: 11 IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
+ + + + I + E++AL GK +Q L + EV + Y A WA + G
Sbjct: 69 ASWLRKISAGIRERATEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+ D +I +GV I+PWNFP L K+APAL GNTIV+K +E TP A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
AK+ E GLP GV N+V G G T G LA + V +S TG G+ + AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
V LELGGK+P I+ DDAD++ AV+ + N GQ C R YV + +YD+FV +
Sbjct: 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
AM+ + G+P ++ + GP I+ ++V + + +E A + GG + +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
PT+ DV
Sbjct: 365 YPPTLLLDV 373
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+GQFV V +P T VI+ + +G AED +A+ A +A E W + ER
Sbjct: 11 IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
+ + + + I + E++AL GK +Q L + EV + Y A WA + G
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+ D +I +GV I+PWNFP L K+APAL GNTIV+K +E TP A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
AK+ E GLP GV N+V G G T G LA + V +S TG G+ + AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
V LELGGK+P I+ DDAD++ AV+ + N GQ C R YV + +YD+FV +
Sbjct: 246 TKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
AM+ + G+P ++ + GP I+ ++V + + +E A + GG + +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
PT+ DV
Sbjct: 365 YPPTLLLDV 373
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+GQFV V +P T VI+ + +G AED +A+ A +A E W + ER
Sbjct: 11 IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
+ + + + I + E++AL GK +Q L + EV + Y A WA + G
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+ D +I +GV I+PWNFP L K+APAL GNTIV+K +E TP A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
AK+ E GLP GV N+V G G T G LA + V +S TG G+ + AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
V LELGGK+P I+ DDAD++ AV+ + N GQ C R YV + +YD+FV +
Sbjct: 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
AM+ + G+P ++ + GP I+ ++V + + +E A + GG + +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
PT+ DV
Sbjct: 365 YPPTLLLDV 373
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 212/377 (56%), Gaps = 15/377 (3%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T + + G+++ AA+ TFPV DP + + VA+ + AV A +AF W +++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ERS ++ + +L+ +N ++LA + T +GKP ++ E+ L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKP-LKEAHGEILYSAFFLEWFSEEARRVY 127
Query: 178 G--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
G + P + L +PIGVA I PWNFP + T KV AL G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRAL-VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQE 292
+AL +A+L +AG+P GV NV+ A G A+ + V K+SFTG TGKI+
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
AA S +K V++ELGG +PFI+FD A+VDQAV A + F N GQ C ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 353 DEFVEKAKARAMRR--IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
D FV KA A AM++ VG+ F+ G QGP I+ + +KV + + + AT+ GG R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 411 LGNRGYFVQPTVFSDVT 427
F +PT+ +VT
Sbjct: 365 HQLGKNFFEPTLLCNVT 381
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 207/394 (52%), Gaps = 20/394 (5%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+ING+ V + ++P R +++ +V++ + + ++A+ +A +AF W + P
Sbjct: 41 IINGERV--TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPE 96
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG- 178
ER+ I+++AA +I + E +A GKP+ ++ ++ + L YYA +++
Sbjct: 97 ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRG 155
Query: 179 ---LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
L+ PG+ N + T P+GV I PWNF L + + GNT+VLK A TP
Sbjct: 156 KEILSRPGEQNRYFYT---PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTP 212
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
+ A ++ +AGLP GV+N V G G G L H ++FTG D G + E AA
Sbjct: 213 VVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272
Query: 296 -----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
+++LK V +E+GGK ++ DAD+D A E + F GQ C AGSR +H+
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332
Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
VYDE +EK A A VGDP GP ID + F+K++ YI G + L GG+
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIG-KKEGRLMTGGEG 391
Query: 411 LGNRGYFVQPTVFSDVTVSFISLLQFLI-PIFSF 443
+ G+F+QPT+ +D+ + + + + P+ +F
Sbjct: 392 DSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAF 425
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 211/377 (55%), Gaps = 15/377 (3%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T + + G+++ AA+ TFPV DP + + VA+ + AV A +AF W +++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ERS ++ + +L+ +N ++LA + T +GKP ++ E+ L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKP-LKEAHGEILYSAFFLEWFSEEARRVY 127
Query: 178 G--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
G + P + L +PIGVA I PWNFP + T KV AL G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRAL-VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQE 292
+AL +A+L +AG+P GV NV+ A G A+ + V K+SFTG TGKI+
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
AA S +K V++ELGG +PFI+FD A+VDQAV A + F N GQ ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 353 DEFVEKAKARAMRR--IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
D FV KA A AM++ VG+ F+ G QGP I+ + +KV + + + AT+ GG R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 411 LGNRGYFVQPTVFSDVT 427
F +PT+ +VT
Sbjct: 365 HQLGKNFFEPTLLCNVT 381
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 201/394 (51%), Gaps = 8/394 (2%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW 113
+I KN ING++V++ + + V +P T EV+ V EDID A TA +AF W
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 114 PKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
K+ R+RI+ L+ ++ EELA L T NGK ++L EV + + + AG
Sbjct: 60 SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP 118
Query: 174 DKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
+ G ++ + PIGV G I P+NFP+++ W A+ GNT +LK +E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
+TPL + +LF +AGLP GV NVV G L H ++ +SF G G+ V +
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYK 237
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
++ NLK V G K+ I+ +DA+++ V A F + G+ C A + V E +
Sbjct: 238 KGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIA 296
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG-DRL 411
DEF+ K + + +G+ GV GP I + ++ L YI G+E A L C G + +
Sbjct: 297 DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV 356
Query: 412 GNRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFI 444
+ GYFV PT+F +VT I + P+ S I
Sbjct: 357 SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVI 390
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 182/372 (48%), Gaps = 9/372 (2%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
N I GQ+V + T + P T +VI + G D + A+ A+ A W K+T
Sbjct: 15 NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLTAR 72
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R ++ A+ I +N LA + GK + + EV + + Y A I G
Sbjct: 73 TRQNMLRTFANKIRENKHILAPMLVAEQGK-LLSVAEMEVDVTATFIDYGCDNALTIEGD 131
Query: 180 TVPGDGNYHIQTLHE-PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P D +H+ P GV I WNFPL L K+ PAL GNT+VLK ++TPL
Sbjct: 132 ILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLAT 191
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
+ ++ EAGLP GVLNV++G G G L ++ TG GK + + +A+
Sbjct: 192 TELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY- 250
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
+ PV LELGGK+P ++ DDAD+D+A E A + F N GQ C R YVH VYDEF+ K
Sbjct: 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAK 310
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY-- 416
VGDP + + GP+ + + + + I+ AT+ GG G+
Sbjct: 311 FLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEG 370
Query: 417 --FVQPTVFSDV 426
+ +PTV DV
Sbjct: 371 GCWYEPTVLVDV 382
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 200/400 (50%), Gaps = 22/400 (5%)
Query: 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
I TK+LI GQ+V+ S + +P VIA + D+D A A+KA E W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAE--WA 67
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
ERS I+ RAA+L+E++ EE+ +G ++ E+ + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPG 126
Query: 175 KIHGL----TVPGDGN--YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228
++HG PG N Y + GV G I PWNFPL L VAPAL GN +V+
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAK-----GVVGVISPWNFPLNLSIRSVAPALAVGNAVVI 181
Query: 229 KSAEQTPLTALYV-AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
K A TP+T + A++F EAG+P GV++ V+G G G +H +SFTG G
Sbjct: 182 KPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241
Query: 288 KIVQELAAKSN-LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY 346
+ V ELA +K V LELGG +PF++ DAD+D A + A F +QGQ C + +R
Sbjct: 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVI 301
Query: 347 VHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLE 405
V V+DEF+EK A++ I GDP G GP I+ Q + I + AT++
Sbjct: 302 VDAAVHDEFLEKF-VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQ 360
Query: 406 CGGDRLGNRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFI 444
G G V P VFSDVT I+ + P+ S +
Sbjct: 361 VEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVL 397
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 176/349 (50%), Gaps = 10/349 (2%)
Query: 84 EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
EV+ V++ + ++A+ A KAF+ W P ER+ ++ RA + + E +AL
Sbjct: 63 EVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERAAVLFRAVAKVRRKKHEFSALL 120
Query: 144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-HGLTVPGDGNYHIQTLHEPIGVAGQI 202
GKP+ ++ ++ + + YYA ++ G V Q ++ P GV I
Sbjct: 121 VKEAGKPWNEA-DADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTPTGVTVVI 179
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
PWNF + + GNT+VLK A P+ A ++ E+GLP GV+N V G G
Sbjct: 180 PPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSG 239
Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDD 317
G L H ++FTG + G + E AAK ++LK V E+GGK ++ +D
Sbjct: 240 AEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDED 299
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
D++ A + + F GQ C AGSR VHE+VYDE +++ + VG+P + V
Sbjct: 300 CDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVY 359
Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
GP ID F K++ YI G E L GG ++GYF++PT+F+D+
Sbjct: 360 MGPVIDQASFNKIMDYIEIGKEE-GRLVSGGKGDDSKGYFIEPTIFADL 407
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 191/370 (51%), Gaps = 12/370 (3%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYE 120
I G++ D+A G TF VY+P T VIA V ED+ AV + A PWP T
Sbjct: 16 IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET--- 72
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R + + D +++N EE+ + +GKP+ ++ + EV Y A + T
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEA-QGEVDYAAGFFDYCAKHISALDSHT 131
Query: 181 VPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+P T+H P+GV G IVPWNFP+ K++ AL G V+K A +TPLT +
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXI 191
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG-KIVQELAAKSN 298
+ + LP G +N+V G G L H DV LSFTG + G K++ + A +
Sbjct: 192 AFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQ-- 249
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
+K + LELGG +PFI+FDDAD++ A + F GQ C +R +VHE+V D F +K
Sbjct: 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK 309
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD--RLGNRGY 416
R + VGD G++ GP I+ + F KV R+++ ++ A+L G LG+ G
Sbjct: 310 LAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGD-GL 368
Query: 417 FVQPTVFSDV 426
F PTV V
Sbjct: 369 FFPPTVVQGV 378
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 11/393 (2%)
Query: 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
+ K+ ING++ SG+T + +P VI + + ++ A A+KA E W K
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
T +R ++ +A + +N +++ + G ++S E+ + +L + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTYTGE 121
Query: 176 IHGLT-VPGDGNYHIQTLHE-PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
+ G+ VP D ++ P+GV I P+NFP+ L +APA+ GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 234 TPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
T ++ +AK F AGLP GVLNV+ G + ++ +SFTG G+ + E
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
+A ++ K + LELGG +PF + DADVD+AV+ A F F +QGQ C +R VH+ VY
Sbjct: 242 IAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
DEFVEK AR + GD GP I+ Q +K L I L G R+G
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG 360
Query: 413 NRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
N + P VF S I+ + PI + I
Sbjct: 361 N---VLTPYVFVGADNNSKIAQTELFAPIATII 390
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 180/343 (52%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
WP+ +RSR++L+AA L+ + EL A + GK +V++ ++V + + YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
A + + + PG+ N ++ + P+G I PWNFP+ +FT + + GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
K AE + V ++FHEAG PPGV+N + G G GA L H + ++FTG + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
+ E A + + K +E GGK+ I+ + AD D A E + + QGQ C A
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
SR + + Y+ +E+ RA R VG P + + GP + EQ +KVL YI G ++
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
L GG RL GYF+ PTVF++V + I+ + P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 179/343 (52%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
WP+ +RSR++L+AA L+ + EL A + GK +V++ ++V + + YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
A + + + PG+ N ++ + P+G I PWNFP+ +FT + + GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
K AE + V ++FHEAG PPGV+N + G G GA L H + ++FTG + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
+ E A + + K +E GGK I+ + AD D A E + + QGQ C A
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
SR + + Y+ +E+ RA R VG P + + GP + EQ +KVL YI G ++
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
L GG RL GYF+ PTVF++V + I+ + P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 178/343 (51%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
WP+ +RSR++L+AA L+ + EL A + GK +V++ ++V + + YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
A + + + PG+ N ++ + P+G I PWNFP+ +FT + + GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
K AE + V ++FHEAG PPGV+N + G G GA L H + ++FTG + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
+ E A + + K +E GGK I+ + AD D A E + + QGQ A
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
SR + + Y+ +E+ RA R VG P + + GP + EQ +KVL YI G ++
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
L GG RL GYF+ PTVF++V + I+ + P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 187/390 (47%), Gaps = 24/390 (6%)
Query: 63 NGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERS 122
NG + SG+ Y P E IA V + + + V R+A+ W + +R
Sbjct: 27 NGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRG 82
Query: 123 RIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 182
I+ + D + K ++ L +L + GK YV+ + EV V + Y G + I G +P
Sbjct: 83 EIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV-GEVQEYVDVCDYAVGLSRMIGGPVLP 141
Query: 183 GD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
+ G+ I+ + P+G+ G I +NFP+ ++ W A ALTCGN + K A TPLT++
Sbjct: 142 SERPGHALIEQWN-PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVA 200
Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
V K+ E LP + ++ G G G A+A VD LSFTG GK+V + +
Sbjct: 201 VTKIVAEVLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVA-MMVQ 258
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
LELGG + I+F+DAD++ V A FA GQ C R +HE V+D V
Sbjct: 259 ERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVV 318
Query: 357 EK-AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
E+ AKA RI GDP+ GP + + L I + TL CGG + G
Sbjct: 319 ERIAKAYKQVRI-GDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPG 377
Query: 416 YFVQPTVFSDV--------TVSFISLLQFL 437
+V+PT+ + + T +F+ +L L
Sbjct: 378 NYVEPTIITGLAHDAPIVHTETFVPILYVL 407
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 20/379 (5%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN +NG++ S +Y+P + + +V E++D A+A+KA + W ++
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ + + AD++ ++ E++ A+ + K Y +S SEV +++Y A ++ G
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
+ G G++ + EP+G+ I P+N+P+ L K+APAL GN I K
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
++A ++P+ LELGGK I+ +DAD++ + F GQ C A R V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
DE VEK + + + +G+P + + P ID + V I + AT R
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
GN + P +F VT
Sbjct: 356 GN---LICPILFDKVTTDM 371
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 187/379 (49%), Gaps = 20/379 (5%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN +NG++ S +Y+P + + +V E++D A+A+KA + W ++
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ + + AD++ ++ E++ A+ + K Y +S SEV +++Y A ++ G
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
+ G G++ + EP+G+ I P+N+P+ L K+APAL GN I K
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++F+G G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
++A ++P+ LELGGK I+ +DAD++ + F GQ C A R V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
DE VEK + + + +G+P + + P ID + V I + AT R
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
GN + P +F VT
Sbjct: 356 GN---LICPILFDKVTTDM 371
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 186/379 (49%), Gaps = 20/379 (5%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN +NG++ S +Y+P + + +V E++D A+A+KA + W ++
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ + + AD++ ++ E++ A+ + K Y +S SEV +++Y A ++ G
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
+ G G++ + EP+G+ I P+N+P+ L K+APAL GN I K
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
++A ++P+ L LGGK I+ +DAD++ + F GQ C A R V E V
Sbjct: 240 KMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
DE VEK + + + +G+P + + P ID + V I + AT R
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
GN + P +F VT
Sbjct: 356 GN---LICPILFDKVTTDM 371
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 186/379 (49%), Gaps = 20/379 (5%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN +NG++ S +Y+P + + +V E++D A+A+KA + W ++
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ + + AD++ ++ E++ A+ + K Y +S SEV +++Y A ++ G
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
+ G G++ + EP+G+ I P+N+P+ L K+APAL GN I K
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
++A ++P+ LELGGK I+ +DAD++ + F GQ A R V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
DE VEK + + + +G+P + + P ID + V I + AT R
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
GN + P +F VT
Sbjct: 356 GN---LICPILFDKVTTDM 371
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 185/373 (49%), Gaps = 16/373 (4%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
L NG++V++ +G+ + P + + ++ E+++ A+ A+ A + W +E
Sbjct: 15 LRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPIHE 72
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R ++ ADL+E+ E + L KP +S EV ++ + A A +++G T
Sbjct: 73 RVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEALRLNGET 131
Query: 181 VPGD----GNYHIQTL--HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
+ GD G+ L EP+GV I P+N+P+ L K+APAL GNT+V K A Q
Sbjct: 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQG 191
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
L+ + + + +AG P G++ VV+G G G L H +D ++FTG TG+ + E
Sbjct: 192 SLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE-- 249
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
K+ + PV LELGGK P I+ DDAD+ F GQ C A R +V + V D+
Sbjct: 250 -KAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 308
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR 414
V K + VG P + + P ID + + I +E+ ATL G R GN
Sbjct: 309 LVANIKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN- 366
Query: 415 GYFVQPTVFSDVT 427
+ PT+ DVT
Sbjct: 367 --LLSPTLLDDVT 377
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 14/354 (3%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I+G++++ + V +P + EVI + E+ A+ TA K + + +
Sbjct: 3 FIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITK 57
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R I++ A I++ EELA + + GKP Q+ + EV + A + +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
+P D I T EP+G+ G I P+NFPL L K+APA+ GN IV + + PL +
Sbjct: 117 IPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175
Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+AK+ A +P GV N+++G G G + + V+ +SFTG G+++ + K
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK---K 232
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ K + LELGG +P I+ DAD+++AV F GQ C + V E + D+F+
Sbjct: 233 AGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
E +A VG+P + GP I E + V + + I+ L GG R
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR 346
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 183/399 (45%), Gaps = 24/399 (6%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ + NG + G+ Y P E IA V + D + V AR+A+ W +
Sbjct: 24 NEGVYNGSW--GGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIP 79
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+R I+ + D + + ++ L +L + GK V+ + EV V + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIG 138
Query: 178 GLTVPGDGNYH-IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G +P + + H + P+G+ G I +NFP+ ++ W A A+ CGN + K A T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 237 TALYV----AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK---- 288
++ V AK+ + LP + ++ G G G A+A V+ LSFTG GK
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
+VQE +S LELGG + I F+DAD+ V A FA GQ C R ++H
Sbjct: 258 MVQERFGRS-----LLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIH 312
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
E ++DE V + K + VG+P+ V GP + L + + T+ GG
Sbjct: 313 ESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG 372
Query: 409 DRLGNRGYFVQPTVFS----DVTVSFISLLQFLIPIFSF 443
+ G +V+PT+ + D +++ ++ +F F
Sbjct: 373 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF 411
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 175/387 (45%), Gaps = 17/387 (4%)
Query: 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
SG+ V P IA V E+++R T F G W M ER ++
Sbjct: 28 GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
+AAD+IE+N++ A + N GKP ++ EV V L KI G +PGD
Sbjct: 85 KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
Y ++T EP+GV I P+N+PL K+ + GN +V+K + PL A
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
K +AG PP + +++ G A +A V +SFTG + G+ V ++ +K
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
+ELGG P I+ +DAD+D A + ++ GQ C A VY + VE+
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
R VGDP V+ GP I P +++ I +E + GG RLG +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 VFSDVTVSFISLLQFLIPIFSFIILCV 448
+ ++ + +F+ + L V
Sbjct: 378 LVEAPADRVKDMVLYKREVFAPVALAV 404
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 174/387 (44%), Gaps = 17/387 (4%)
Query: 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
SG+ V P IA V E+++R T F G W M ER ++
Sbjct: 28 GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
+AAD+IE+N++ A + N GKP ++ EV V L KI G +PGD
Sbjct: 85 KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
Y ++T EP+GV I P+N+PL K+ + GN +V+K + PL A
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
K +AG PP + +++ G A +A V +SFTG + G+ V ++ +K
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
+ELGG P I+ +DAD+D A + ++ GQ C A VY + VE+
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
R VGDP V+ GP I P +++ I +E + GG RLG +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 VFSDVTVSFISLLQFLIPIFSFIILCV 448
++ + +F+ + L V
Sbjct: 378 FVEAPADRVKDMVLYKREVFAPVALAV 404
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 166/361 (45%), Gaps = 17/361 (4%)
Query: 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
SG+ V P IA V E+++R T F G W M ER ++
Sbjct: 28 GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
+AAD+IE+N++ A + N GKP ++ EV V L KI G +PGD
Sbjct: 85 KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
Y ++T EP+GV I P+N+PL K+ + GN +V+K + PL A
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
K +AG PP + +++ G A +A V +SFTG + G+ V ++ +K
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
+ELGG P I+ +DAD+D A + ++ GQ C A VY + VE+
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
R VGDP V+ GP I P +++ I +E + GG RLG +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 V 422
+
Sbjct: 378 L 378
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 161/351 (45%), Gaps = 11/351 (3%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T E A+ ++ ID A+ A + + W P R+ I+ A+ ++++ +E
Sbjct: 10 NPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKEHEDE 67
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA-DKIHGLTVPGD-GNYHIQTLHEPI 196
LA T GK +S K EV + V + +YYA + + + D GN + L +
Sbjct: 68 LAKXXTLEXGKLLSES-KEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYY--LKQST 124
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL- 255
GV PWNFPL AP GN I+LK A P +A AK+ AG P G L
Sbjct: 125 GVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLI 184
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
N+ Y A + + + ++ TG G V E A K NLK T ELGG FI+
Sbjct: 185 NLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFIVL 241
Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
DDAD + + A YN GQ C + R V + YDE + + K GDP ++
Sbjct: 242 DDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEAD 301
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
P + +K+ ++ I++ A + + ++G F +PT+ +D+
Sbjct: 302 TTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDI 352
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 158/325 (48%), Gaps = 18/325 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA-- 170
W P R+ +L+AA K + EL+A + GK + Q+ ++V + L YYA
Sbjct: 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYARE 642
Query: 171 ----GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
G ++ PG+ N++ +EP GVA I PWNFPL + + A+ GN +
Sbjct: 643 MIRLGQPQRVG--HAPGELNHY---FYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCV 697
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
V K + T + ++ +LF EAGLP GV N G G G L H D+ ++FTG +T
Sbjct: 698 VFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMET 757
Query: 287 GKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
G + E AAK +N+K + E+GGK+ II DDAD+D+AV ++ F QGQ C A
Sbjct: 758 GLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSA 817
Query: 342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN 401
SR V + VYD+F+E+ + A VG G D + + + Y G
Sbjct: 818 CSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG 877
Query: 402 ATLECGGDRLGNRGYFVQPTVFSDV 426
L G GYFV T+ +
Sbjct: 878 HVLYESPVPAGE-GYFVPMTIIGGI 901
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 169/374 (45%), Gaps = 11/374 (2%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+ I+G+ V SG+ +++P T EV VA A D D A A + W P
Sbjct: 29 HFIDGKRVAGTSGRVSNIFNPATGEVQGTVAL--ASDADLAAAVESAKAAQPKWAATNPQ 86
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R+R+ + L+ N ELA + +GK + K ++ + + + G
Sbjct: 87 RRARVFXKFVQLLNDNXNELAEXLSREHGK-TIDDAKGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 180 TVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
G G ++ +P+G+ I P+NFP + W APA+ CGN +LK +E+ P
Sbjct: 146 FTEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVP 205
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
+ +A+L EAGLP G+LNVV+G A A+ +H D+ +SF G + V AA N
Sbjct: 206 IRLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-XN 263
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY-VHERVYDEFVE 357
K G K+ II DAD+DQA A + + G+ C A S V E + ++
Sbjct: 264 GKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY- 416
K +G + GP + E Q++ I SGIE A L G +GY
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 417 ---FVQPTVFSDVT 427
F+ +F DVT
Sbjct: 384 NGHFIGGCLFDDVT 397
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W + R+ + +AA L+E AL GK +L SE+ YYA
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQ 624
Query: 173 ADKIHG--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230
K+ G +PG GV I PWNFPL +F +V AL GN++V K
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKP 684
Query: 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK-I 289
AEQTP A L HEAG+P L +V+G G GAAL +H D+ + FTG + + I
Sbjct: 685 AEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARSI 743
Query: 290 VQELAAKSN-LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
+ LAAK + P+ E GG + I A +Q + + F + GQ C A +V
Sbjct: 744 NRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQ 803
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
E V D +E A +GDP GP ID E Q++ +I + +++ A L G
Sbjct: 804 EDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI-ARMKTEARLHFAG 862
Query: 409 DRLGNRGYFVQPTVF 423
G FV P +F
Sbjct: 863 P--APEGCFVAPHIF 875
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 6/368 (1%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T + +A +A++I+ A++ A F + W + +R++ + + + EE
Sbjct: 13 NPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
A T GKP Q+ ++EV L +YA N + P+GV
Sbjct: 71 XAQCITREXGKPIKQA-RAEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPLGV 129
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
I PWNFPL P L GN+ +LK A A +A++ EAG P GV V
Sbjct: 130 ILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWV 189
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
+ + + + ++ TG A + LK LELGG PFI+ +DA
Sbjct: 190 NANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
D++ AV+ A + N GQ C A R V E + F ++ A A GDP +
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDL 307
Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLI 438
GP + ++ + +++ + A L GG+++ G + TV +DVT + Q L
Sbjct: 308 GPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELF 367
Query: 439 -PIFSFII 445
P+ + +
Sbjct: 368 GPVAAITV 375
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 7/298 (2%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ + I GQ++ A G+T DP V+ + DA +D AV AR+AF W +
Sbjct: 6 STHYIAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+R ++ R A ++ +ELA + GKP +S V ++ + ++
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTG 122
Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+ P D ++ H+P GV P+NFP L + PAL GN +V K +E TP
Sbjct: 123 EKSGPLADATAVLR--HKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPK 180
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
A K + +AGLP GVLN+V G G G ALA+H +D L FTG TG ++
Sbjct: 181 VAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG 239
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
K + LE GG +P ++ + AD+D AV + F + GQ C R V + + +
Sbjct: 240 QPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 195 PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP-- 252
P + G I PWNFPL L PAL G +V+K +E P +VA L P
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPR---FVAPLLXALNTVPEL 182
Query: 253 -GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
VL V G G T GA L ++ VD + FTG TG+ V E AA+ + P LELGGK P
Sbjct: 183 RDVLIFVEGGGET-GANLINY--VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDP 238
Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
I+ + A+++ A + N GQ C + R YV E ++EF + A+A R + P
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG--DRLGNRGYFVQPTVFSDVTVS 429
GP I +Q + +I +E A + CGG + LG G++ +PTV ++V S
Sbjct: 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGG-GWWCRPTVXTNVNHS 357
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 8/246 (3%)
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGL 179
R + + R + + N E L + + GKP +E+ V+ + + D+ + +
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPV 111
Query: 180 TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+VP + EP GV I P+N+P+ L + A+ GNT ++K +E TP
Sbjct: 112 SVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPE 171
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
T+ + K+ EA P + V+ G G + L S + D + FTG + GK+V + AAK
Sbjct: 172 TSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK 228
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+L PV LELGGK P I+ DAD+DQ V F F N GQ C A YVH V D +
Sbjct: 229 -HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALL 287
Query: 357 EKAKAR 362
E+ R
Sbjct: 288 ERLVER 293
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 120/246 (48%), Gaps = 8/246 (3%)
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGL 179
R + + R + + N E L + + GKP +E+ V+ + + D+ + +
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPV 111
Query: 180 TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+VP + EP GV I P+N+P+ L + A+ GNT ++K +E TP
Sbjct: 112 SVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPE 171
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
T+ + K+ EA P + V+ G G + L S + D + FTG + GK+V + AAK
Sbjct: 172 TSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK 228
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+L PV LELGGK P I+ DAD+DQ V F F N GQ A YVH V D +
Sbjct: 229 -HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALL 287
Query: 357 EKAKAR 362
E+ R
Sbjct: 288 ERLVER 293
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 16/351 (4%)
Query: 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAA 141
A +A D ++RA+ A A E W +R+++ L+AAD++ E+ A
Sbjct: 88 AHKVAKFCYADKALLNRAIDAALAARKE--WDLKPMADRAQVFLKAADMLSGPRRAEVLA 145
Query: 142 LETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGV 198
GK +Q+ ++ + A +A ++ G ++VP N+ + E G
Sbjct: 146 KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLE--GF 203
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
I P+NF + APAL GN ++ K ++ L + V ++ EAGLPP ++ V
Sbjct: 204 VAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFV 262
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFI 313
GPT G + S + ++FTG T K + Q L + E GGK+
Sbjct: 263 PADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHF 322
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
+ ADVD V + F GQ C A SR YV + ++ + + R VGDP +
Sbjct: 323 VHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAE 382
Query: 374 S-GVEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
G ID + F ++ +++ S + ++ GG + GY+V+P +
Sbjct: 383 DFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCI 433
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 141/335 (42%), Gaps = 19/335 (5%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAAD-LIEKNMEELAALETWNNGKPYVQSL 155
I AV AR AF G + P + L A LI++ +EL + K +
Sbjct: 20 ISEAVKRARAAFSSG---RTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAY 76
Query: 156 KSEVPMVVRLLHYYAG----WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
EV V+ + Y WA P + EP+GV I WN+P L
Sbjct: 77 YEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNL 136
Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
+ A+ GN +VLK +E + A +A + + L + V++G P L
Sbjct: 137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKE 195
Query: 272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
D + +TG GKI+ AAK +L PVTLELGGKSP + + D+D A +
Sbjct: 196 RFD--HILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
F N GQ C A + ++ VEK K ++++ G+ K + G I FQ+V+
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKEFYGEDAKKSRDYGRIISARHFQRVM 311
Query: 392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
IE G R ++ PT+ +DV
Sbjct: 312 GL----IEGQKVAYGGTGDAATR--YIAPTILTDV 340
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 152/348 (43%), Gaps = 16/348 (4%)
Query: 86 IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
+A D +++A+ A A E W +R++I L+AAD++ E+ A
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
GK +Q+ ++ + A +A ++ G ++VP N + E G
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
I P+NF + APAL GN ++ K ++ L + V ++ EAGLPP ++ V
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
GP G + S + ++FTG T K + Q L + E GGK+ +
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
ADV+ V + F GQ C A SR YV ++ + + R VGDP + G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
ID + F ++ +++ S + T+ GG + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 16/348 (4%)
Query: 86 IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
+A D +++A+ A A E W +R++I L+AAD++ E+ A
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
GK +Q+ ++ + A +A ++ G ++VP N + E G
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
I P+NF + APAL GN ++ K ++ L + V ++ EAGLPP ++ V
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
GP G + S + ++FTG T K + Q L + E GGK+ +
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
ADV+ V + F GQ C A +R YV ++ + + R VGDP + G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
ID + F ++ +++ S + T+ GG + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 21/336 (6%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
I V AR+AF+ G + R + + +I +N++ ++ + GK S
Sbjct: 3 ISDTVKRAREAFNSGKTRSLQ--FRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 60
Query: 157 SEVPMVVRLL----HYYAGWADK--IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
EV V+ L WA+ + + +I + EP+GV I WN+P
Sbjct: 61 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHS--EPLGVVLVIGAWNYPFN 118
Query: 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
L + A+ GN ++LK +E + A +A L + + + VV G P L
Sbjct: 119 LTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPETTELLK 177
Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
D + +TG GKIV AAK +L PVTLELGGKSP + D D+D A +
Sbjct: 178 ERFD--HIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWG 234
Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
F N GQ C A + ++ VEK K ++++ G+ K + G I+ FQ+V
Sbjct: 235 KFMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKDFYGEDAKQSRDYGRIINDRHFQRV 293
Query: 391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
G+ N + GG ++ PT+ DV
Sbjct: 294 -----KGLIDNQKVAHGG-TWDQSSRYIAPTILVDV 323
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 16/348 (4%)
Query: 86 IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
+A D +++A+ A A E W +R++I L+AAD++ E+ A
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
GK +Q+ ++ + A +A ++ G ++VP N + E G
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
I P+NF + APAL GN ++ K ++ L + V ++ EAGLPP ++ V
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
GP G + S + ++FTG T K + Q L + E GGK+ +
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
ADV+ V + F GQ C A R YV ++ + + R VGDP + G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
ID + F ++ +++ S + T+ GG + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN + GQ++ A +G + DP T + V+ + D+ RA + AR+ D G +
Sbjct: 9 KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
Y +R+ + L++ + A+ T N+G S ++ + L YYA
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
++H L ++ D ++ Q + P GVA I +NFP K APAL G ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+K A T LT VA + LPPG L+++ G ++ L D +SFTG DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
++ + A+ N++ +L + I+ DA D F LF +
Sbjct: 241 AATLRAHPAFVQRGARLNVQADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
GQ C A R +V E + +E KA+ + VG+P V G + EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
I
Sbjct: 352 AGI 354
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN + GQ++ A +G + DP T + V+ + D+ RA + AR+ D G +
Sbjct: 7 KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 62
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
Y +R+ + L++ + A+ T N+G S ++ + L YYA
Sbjct: 63 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 121
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
++H L ++ D ++ Q + P GVA I +NFP K APAL G ++
Sbjct: 122 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 181
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+K A T LT VA + LPPG L+++ G ++ L D +SFTG DT
Sbjct: 182 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 238
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
++ + A+ N++ +L + I+ DA D F LF +
Sbjct: 239 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 289
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
GQ C A R +V E + +E KA+ + VG+P V G + EQ++ VL
Sbjct: 290 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 349
Query: 392 RYI 394
I
Sbjct: 350 AGI 352
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN + GQ++ A +G + DP T + V+ + D+ RA + AR+ D G +
Sbjct: 9 KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
Y +R+ + L++ + A+ T N+G S ++ + L YYA
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
++H L ++ D ++ Q + P GVA I +NFP K APAL G ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+K A T LT VA + LPPG L+++ G ++ L D +SFTG DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
++ + A+ N++ +L + I+ DA D F LF +
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
GQ C A R +V E + +E KA+ + VG+P V G + EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
I
Sbjct: 352 AGI 354
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN + GQ++ A +G + DP T + V+ + D+ RA + AR+ D G +
Sbjct: 9 KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
Y +R+ + L++ + A+ T N+G S ++ + L YYA
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
++H L ++ D ++ Q + P GVA I +NFP K APAL G ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+K A T LT VA + LPPG L+++ G ++ L D +SFTG DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
++ + A+ N++ +L + I+ DA D F LF +
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
GQ C A R +V E + +E KA+ + VG+P V G + EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
I
Sbjct: 352 AGI 354
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 44/363 (12%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN + GQ++ A +G + DP T + V+ + D+ RA + AR+ D G +
Sbjct: 9 KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
Y +R+ + L++ + A+ T N+G S ++ + L YYA
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
++H L ++ D ++ Q + P GVA I +NFP K APAL G ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+K A T LT VA + LPPG L+++ G ++ L D +SFTG DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
++ + A+ N++ +L + I+ DA D F LF +
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
GQ A R +V E + +E KA+ + VG+P V G + EQ++ VL
Sbjct: 292 TVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
I
Sbjct: 352 AGI 354
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 121/306 (39%), Gaps = 36/306 (11%)
Query: 59 KNLINGQFVDAASGKTF---PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
K+L+ G+++D A TF P + P + A G E ++RA A +AF W
Sbjct: 31 KHLVAGEWLDGAG--TFASAPAHGP-----AHDFAVGTVELVNRACEAAEEAF----WTY 79
Query: 116 --MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
+ ER+ + AD IE E + + + G P + L E L +A
Sbjct: 80 GYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHI 138
Query: 174 DKIHGLTVPGDG---------NYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTC 222
+K L D I+ + P+G NFPL T A AL
Sbjct: 139 EKGDYLDRRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAA 198
Query: 223 GNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
G +V+K P T VA+ A G+ PGV +++ G G AL H + +
Sbjct: 199 GCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258
Query: 279 SFTGHCDTGKIVQEL-AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAH---FALFYN 334
FTG G+ + +L AA+ P ELG +P + +A +A L +L
Sbjct: 259 GFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXG 318
Query: 335 QGQCCC 340
GQ C
Sbjct: 319 AGQFCT 324
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 9/179 (5%)
Query: 184 DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
D N T+ EP+G+ IVP P +K +L N I+ + + AK
Sbjct: 92 DDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAK 151
Query: 244 LFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
L +A G P ++ + AL H D+ + TG K AA S+
Sbjct: 152 LVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSG 206
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
KP G P +I + AD+ +AV + ++ G C + V + VYDE E+
Sbjct: 207 KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 206 NFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVS 259
NFPL A AL G +++K P T+ VA+ +A LP + ++
Sbjct: 147 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 206
Query: 260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA-AKSNLKPVTLELGGKSPFIIFDDA 318
G G AL SH ++ + FTG G+ + LA + P ELG +P IF A
Sbjct: 207 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 266
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 10/177 (5%)
Query: 184 DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
D + + P+GV ++P P +K ++ GN+IV L +
Sbjct: 97 DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVR 156
Query: 244 LFHE----AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+ E AG P G ++ ++ L H D + TG K AA S+
Sbjct: 157 IISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK-----AAYSSG 211
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
P G P I A++ +AV+ + ++ G CA ++ V ERV E V
Sbjct: 212 TPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNG-TICASEQSVVVERVNKEAV 267
>pdb|3H0G|F Chain F, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|R Chain R, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 142
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T + +VA +AVA D P MT YER+RI+ A I N
Sbjct: 42 EPSTTVITEDVASSKTAQSGKAVAKE----DRTTTPYMTKYERARILGTRALQISMNAPV 97
Query: 139 LAALETWNNGKPYVQSLKS----EVPMVVR 164
L LE P ++K ++P++VR
Sbjct: 98 LVDLE--GETDPLQIAMKELAQKKIPLLVR 125
>pdb|1KV9|A Chain A, Structure At 1.9 A Resolution Of A Quinohemoprotein
Alcohol Dehydrogenase From Pseudomonas Putida Hk5
Length = 668
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 67 VDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVA 102
VDAASGK YDP A+V A + DA ++R VA
Sbjct: 81 VDAASGKELWRYDPEVAKVKARTSCCDA--VNRGVA 114
>pdb|4G1B|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|B Chain B, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|C Chain C, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|D Chain D, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1V|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin
Length = 399
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
D T E+I E D + +K ++E WP P+E + A+D++E
Sbjct: 112 DAATPEIINAWGEAYQAIADIFITVEKKMYEEALWPGWKPFEITAKEYVASDIVE 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,103,191
Number of Sequences: 62578
Number of extensions: 559330
Number of successful extensions: 1635
Number of sequences better than 100.0: 100
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1320
Number of HSP's gapped (non-prelim): 100
length of query: 456
length of database: 14,973,337
effective HSP length: 102
effective length of query: 354
effective length of database: 8,590,381
effective search space: 3040994874
effective search space used: 3040994874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)