Query 012806
Match_columns 456
No_of_seqs 262 out of 2081
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 16:36:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012806.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012806hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.9E-91 9.8E-96 725.8 41.9 398 56-455 5-407 (490)
2 3ifg_A Succinate-semialdehyde 100.0 1.2E-87 4.3E-92 699.1 43.1 395 57-455 12-408 (484)
3 3ed6_A Betaine aldehyde dehydr 100.0 1E-86 3.4E-91 696.9 45.7 395 57-455 32-434 (520)
4 3rh9_A Succinate-semialdehyde 100.0 1.6E-86 5.6E-91 693.2 46.3 396 56-455 10-408 (506)
5 2o2p_A Formyltetrahydrofolate 100.0 1.1E-86 3.6E-91 696.3 44.3 396 59-455 38-441 (517)
6 1bxs_A Aldehyde dehydrogenase; 100.0 5E-86 1.7E-90 689.3 45.9 397 58-455 21-420 (501)
7 3b4w_A Aldehyde dehydrogenase; 100.0 6.2E-86 2.1E-90 688.2 45.0 396 58-455 9-407 (495)
8 3ek1_A Aldehyde dehydrogenase; 100.0 1.9E-86 6.4E-91 692.4 40.8 393 57-455 32-426 (504)
9 3u4j_A NAD-dependent aldehyde 100.0 8.2E-86 2.8E-90 691.2 45.6 397 57-455 22-422 (528)
10 4f3x_A Putative aldehyde dehyd 100.0 5.1E-86 1.8E-90 688.7 43.3 396 55-455 23-421 (498)
11 3iwj_A Putative aminoaldehyde 100.0 1.3E-85 4.6E-90 687.4 46.2 397 57-455 7-413 (503)
12 1o04_A Aldehyde dehydrogenase, 100.0 5.5E-86 1.9E-90 688.8 42.6 396 59-455 21-419 (500)
13 1a4s_A ALDH, betaine aldehyde 100.0 1.8E-85 6E-90 686.0 45.0 394 57-455 19-420 (503)
14 3i44_A Aldehyde dehydrogenase; 100.0 1.7E-85 5.7E-90 684.7 44.2 394 57-455 25-423 (497)
15 3k2w_A Betaine-aldehyde dehydr 100.0 1.4E-85 4.9E-90 686.2 42.1 397 55-455 10-412 (497)
16 3qan_A 1-pyrroline-5-carboxyla 100.0 9.1E-85 3.1E-89 684.7 45.8 392 57-455 37-437 (538)
17 3r31_A BADH, betaine aldehyde 100.0 3.2E-85 1.1E-89 685.1 40.9 391 57-455 14-412 (517)
18 2imp_A Lactaldehyde dehydrogen 100.0 6.5E-85 2.2E-89 679.2 42.9 396 56-455 5-403 (479)
19 2d4e_A 5-carboxymethyl-2-hydro 100.0 7.9E-85 2.7E-89 682.9 43.2 393 58-455 27-429 (515)
20 3jz4_A Succinate-semialdehyde 100.0 1.2E-84 4.1E-89 677.6 43.4 395 57-455 9-405 (481)
21 4e4g_A Methylmalonate-semialde 100.0 5.1E-85 1.8E-89 684.1 40.3 396 55-455 24-426 (521)
22 1wnd_A Putative betaine aldehy 100.0 2.2E-84 7.6E-89 675.9 42.6 392 58-455 24-419 (495)
23 3prl_A NADP-dependent glyceral 100.0 1.7E-84 5.8E-89 678.4 41.5 389 57-455 11-406 (505)
24 2ve5_A BADH, betaine aldehyde 100.0 2.9E-84 9.9E-89 676.6 42.4 396 57-455 6-407 (490)
25 4dng_A Uncharacterized aldehyd 100.0 1.7E-83 5.8E-88 669.9 43.0 392 57-455 6-401 (485)
26 2w8n_A Succinate-semialdehyde 100.0 9E-84 3.1E-88 671.1 40.4 391 58-455 13-410 (487)
27 2j6l_A Aldehyde dehydrogenase 100.0 3.1E-83 1.1E-87 669.1 43.6 392 57-455 23-420 (500)
28 1t90_A MMSDH, probable methylm 100.0 4.9E-83 1.7E-87 665.9 41.7 392 58-455 6-401 (486)
29 3pqa_A Lactaldehyde dehydrogen 100.0 3E-83 1E-87 666.0 39.8 381 60-455 2-387 (486)
30 3r64_A NAD dependent benzaldeh 100.0 5.6E-83 1.9E-87 668.4 41.8 393 56-455 11-408 (508)
31 1uzb_A 1-pyrroline-5-carboxyla 100.0 4.9E-83 1.7E-87 670.0 41.1 390 58-455 38-437 (516)
32 3ros_A NAD-dependent aldehyde 100.0 8E-83 2.7E-87 662.5 40.4 377 74-455 5-382 (484)
33 3ty7_A Putative aldehyde dehyd 100.0 5.1E-83 1.7E-87 665.2 38.0 392 57-455 7-402 (478)
34 1euh_A NADP dependent non phos 100.0 1.1E-82 3.6E-87 662.0 39.1 386 58-455 5-397 (475)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 2E-82 6.7E-87 662.7 39.9 387 58-455 19-415 (501)
36 3ju8_A Succinylglutamic semial 100.0 4.1E-82 1.4E-86 659.5 41.5 390 59-455 7-400 (490)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 8.8E-82 3E-86 663.5 40.9 395 55-455 61-469 (563)
38 3etf_A Putative succinate-semi 100.0 4.2E-80 1.4E-84 641.0 42.1 380 71-455 5-385 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 2.3E-79 7.9E-84 678.4 41.8 393 57-455 531-931 (1026)
40 4h7n_A Aldehyde dehydrogenase; 100.0 6.8E-79 2.3E-83 633.2 35.4 379 69-455 2-384 (474)
41 2y53_A Aldehyde dehydrogenase 100.0 1.1E-78 3.8E-83 640.0 37.0 389 58-455 8-431 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 8.9E-75 3.1E-79 599.6 39.0 369 72-455 5-378 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 4.8E-75 1.6E-79 611.5 32.3 380 55-455 27-432 (528)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 8.9E-74 3.1E-78 599.5 32.9 369 69-455 3-397 (510)
45 3sza_A Aldehyde dehydrogenase, 100.0 8E-73 2.7E-77 585.7 39.0 351 92-455 15-370 (469)
46 3haz_A Proline dehydrogenase; 100.0 1.8E-70 6.1E-75 606.1 37.3 358 89-455 544-908 (1001)
47 3my7_A Alcohol dehydrogenase/a 100.0 4.3E-65 1.5E-69 526.5 22.1 341 89-455 1-356 (452)
48 3k9d_A LMO1179 protein, aldehy 100.0 8.6E-65 3E-69 525.9 20.3 343 88-454 5-360 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.7E-63 9.3E-68 513.2 16.0 328 75-455 9-355 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 9.6E-62 3.3E-66 502.3 13.4 320 95-455 14-360 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 2.4E-58 8.1E-63 474.9 21.6 312 94-455 25-359 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 1.7E-58 5.9E-63 473.7 19.6 311 93-455 12-342 (427)
53 4gic_A HDH, histidinol dehydro 90.6 14 0.00049 36.5 22.1 164 185-364 119-292 (423)
54 3v4g_A Arginine repressor; vib 74.5 3.4 0.00012 36.0 4.7 123 116-262 29-153 (180)
55 1kae_A HDH, histidinol dehydro 67.6 1E+02 0.0034 30.5 21.2 193 158-364 87-290 (434)
56 1b93_A Protein (methylglyoxal 65.9 7.8 0.00027 32.8 5.0 114 197-336 12-135 (152)
57 1b4a_A Arginine repressor; hel 65.0 40 0.0014 28.2 9.3 36 222-261 90-125 (149)
58 3lap_A Arginine repressor; arg 61.0 47 0.0016 28.5 9.1 125 117-262 17-147 (170)
59 1vmd_A MGS, methylglyoxal synt 57.7 9.2 0.00031 33.2 4.0 118 193-336 23-151 (178)
60 3fxd_A Protein ICMQ; helix bun 56.7 40 0.0014 23.1 6.1 47 92-144 5-51 (57)
61 2xw6_A MGS, methylglyoxal synt 54.8 5.1 0.00017 33.2 1.8 84 210-304 18-110 (134)
62 2yvq_A Carbamoyl-phosphate syn 50.1 20 0.00067 29.8 4.8 72 223-305 50-131 (143)
63 1b4b_A Arginine repressor; cor 46.9 34 0.0012 24.6 5.1 36 222-261 12-47 (71)
64 2zfz_A Arginine repressor; DNA 46.0 38 0.0013 25.0 5.3 36 222-261 20-55 (79)
65 3v42_A Folliculin; tumor suppr 43.9 26 0.00088 31.6 4.8 67 213-287 21-87 (226)
66 2p5m_A Arginine repressor; alp 42.3 36 0.0012 25.4 4.7 36 222-261 24-59 (83)
67 1xxa_A ARGR, arginine represso 40.9 32 0.0011 25.4 4.1 38 222-262 14-51 (78)
68 3pzy_A MOG; ssgcid, seattle st 36.6 25 0.00085 29.9 3.4 52 236-288 27-80 (164)
69 2ioj_A Hypothetical protein AF 33.3 44 0.0015 27.2 4.3 50 253-303 53-102 (139)
70 3iwt_A 178AA long hypothetical 32.6 37 0.0013 29.0 3.9 54 234-287 38-94 (178)
71 1y5e_A Molybdenum cofactor bio 31.8 16 0.00053 31.3 1.3 54 234-287 29-85 (169)
72 3rfq_A Pterin-4-alpha-carbinol 29.8 25 0.00084 30.7 2.2 55 234-288 47-103 (185)
73 2pjk_A 178AA long hypothetical 22.5 43 0.0015 28.9 2.4 57 232-288 36-95 (178)
74 2v9v_A Selenocysteine-specific 21.1 62 0.0021 25.9 3.0 80 326-408 36-124 (135)
75 1wu2_A MOEA protein, molybdopt 20.8 21 0.00071 35.2 -0.0 55 235-289 210-265 (396)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.9e-91 Score=725.75 Aligned_cols=398 Identities=39% Similarity=0.673 Sum_probs=380.0
Q ss_pred CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
...++||||+|+++.++++++++||.||+++++++.++.+|+++||++|++||+ .|++++..+|.++|+++++.|+++
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345799999999988999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
.++|++++++|+|||+.+++..|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999998667999999999999999998887777666778899999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.+.+.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887555
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 44899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
+++||++++.+++++.++|++++++|+++++||++.. .+|+|++||||.+++++|+++.| +||||++|+.|+|.+
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence 9999999999999999999999999999999998643 36999999999999999977775 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 403 eAi~~ 407 (490)
T 2wme_A 403 EAIRR 407 (490)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.2e-87 Score=699.14 Aligned_cols=395 Identities=36% Similarity=0.568 Sum_probs=377.6
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
++|++++++|+|||..+++ .|+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 9999999999999999998 6999999999999999888776655533 4567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++.+++++.++|++++++|+++++||.+...+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999875557999999999999999977775 9999999999999999997
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 408 ~ 408 (484)
T 3ifg_A 408 L 408 (484)
T ss_dssp H
T ss_pred H
Confidence 5
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1e-86 Score=696.92 Aligned_cols=395 Identities=35% Similarity=0.610 Sum_probs=377.3
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF--DEGPWPKMTPYERSRIMLRAADLIEK 134 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~iL~~~a~~l~~ 134 (456)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|+++++.|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 3478999999988788999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (456)
Q Consensus 135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (456)
+.++|++++++|+|||..+++ .|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999999998 5999999999999999988777665543 45678899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 373 (456)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV 448 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~ 448 (456)
+++++||++++++++++.++|++++++|+++++||.+.. .+|+|++||||.+++++|+++.+ +||||++|+.+++
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 47999999999999999987775 9999999999999
Q ss_pred ccccccc
Q 012806 449 VTDCTSI 455 (456)
Q Consensus 449 ~~eai~~ 455 (456)
.+|||++
T Consensus 428 ~deAi~~ 434 (520)
T 3ed6_A 428 EQEAIQL 434 (520)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.6e-86 Score=693.15 Aligned_cols=396 Identities=32% Similarity=0.526 Sum_probs=378.9
Q ss_pred CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKEN 87 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 445799999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEe-eccceEEEEccCCchHHHHHh
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
.++|++++++|+|||..+++ .|+..+++.++||++.+++..+...+...+...++.+ +|+|||++|+|||||+.+.++
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (506)
T 3rh9_A 88 REEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAK 166 (506)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHH
Confidence 99999999999999999998 7999999999999999998877766544456678889 999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus 167 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~a 246 (506)
T 3rh9_A 167 KLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT 246 (506)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (456)
Q Consensus 295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~ 374 (456)
++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 247 a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 325 (506)
T 3rh9_A 247 AE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMND 325 (506)
T ss_dssp TT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccc
Confidence 88 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806 375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC 452 (456)
Q Consensus 375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea 452 (456)
++++||++++++++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus 326 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (506)
T 3rh9_A 326 GIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV 405 (506)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999986443 7999999999999999977775 99999999999999999
Q ss_pred ccc
Q 012806 453 TSI 455 (456)
Q Consensus 453 i~~ 455 (456)
|++
T Consensus 406 i~~ 408 (506)
T 3rh9_A 406 IDA 408 (506)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 5
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.1e-86 Score=696.28 Aligned_cols=396 Identities=39% Similarity=0.735 Sum_probs=375.1
Q ss_pred CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (456)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 138 (456)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|+++++.|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999976667899999999999999999999999999999999999866699999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC----CCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
|++++++|+|||+.+++..|+..+++.++||+++++++.+...+. .++...++.++|+|||++|+|||||+.+.++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999874699999999999999998877765543 2333578999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|.+.+.++.|..|++||+|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred h-hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806 295 A-KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (456)
Q Consensus 295 a-~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 373 (456)
+ + ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 7 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc--cc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV--VT 450 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~--~~ 450 (456)
+++++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+++.+ +||||++|+.|++ .+
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 99999999999999999999999999999999999864446999999999999999977775 9999999999999 99
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 437 eAi~~ 441 (517)
T 2o2p_A 437 AVLSR 441 (517)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 6
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=5e-86 Score=689.32 Aligned_cols=397 Identities=53% Similarity=0.932 Sum_probs=376.1
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999987678899999999999999999999999999999999999743 6999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
++|++++++|+|||..++...|+..+++.++||++.++++.+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998765799999999999999998887765554445567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh-
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA- 295 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a- 295 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|..|++||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+.+.+ +||||++|+.|+|.+|+|+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999764446999999999999999977775 9999999999999999997
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 420 ~ 420 (501)
T 1bxs_A 420 R 420 (501)
T ss_dssp H
T ss_pred H
Confidence 5
No 7
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.2e-86 Score=688.18 Aligned_cols=396 Identities=38% Similarity=0.584 Sum_probs=375.4
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|+++++.|+++.+
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997767889999999999999999999999999999999999986679999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~ 217 (456)
+|++++++|+|||..+++..|+..+++.++||+++++++.+...+.+.+...++.++|+|||++|+|||||+.+.+++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIA 168 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHH
Confidence 99999999999999998646999999999999999988877655433444678999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (456)
Q Consensus 218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 297 (456)
+||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+.++.|+.|++||+|+||||+.+|+.|.+.+++
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~- 246 (495)
T 3b4w_A 169 PALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE- 246 (495)
T ss_dssp HHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH-
T ss_pred HHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-
Confidence 9999999999999999999999999999999999999999999 88899999999999999999999999999999998
Q ss_pred CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (456)
Q Consensus 298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~ 377 (456)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+||++++++++++.++|++++++|+++++||+... ..|+|++||||.+++++|+.+.+ +||||++|+.+++.+|||+
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999997643 36999999999999999977775 9999999999999999997
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 407 ~ 407 (495)
T 3b4w_A 407 I 407 (495)
T ss_dssp H
T ss_pred H
Confidence 5
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.9e-86 Score=692.40 Aligned_cols=393 Identities=35% Similarity=0.595 Sum_probs=375.6
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
++|++++++|+|||..+++ .|+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998 5999999999999999988776655433 3466889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|.+.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++++++++.++|++++++|+++++||.+ .+|+|++|||+.+++++|+++.+ +||||++|+.|+|.||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976 36899999999999999977775 9999999999999999997
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 426 ~ 426 (504)
T 3ek1_A 426 Q 426 (504)
T ss_dssp H
T ss_pred H
Confidence 5
No 9
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.2e-86 Score=691.22 Aligned_cols=397 Identities=40% Similarity=0.651 Sum_probs=378.0
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
..++||||+|+++.++++++++||.| |+++++++.++.+|+++++++|++||+++.|+.++..+|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 35799999999887889999999999 99999999999999999999999999322899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
.++|++++++|+|||..++. .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999995 7999999999999999988877666554 456789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (456)
Q Consensus 295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~ 374 (456)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++
T Consensus 261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 88 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806 375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC 452 (456)
Q Consensus 375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea 452 (456)
++++||++++++++++.++|++++++|+++++||.+... +|+|++|||+.+++++|+.+.| +||||++|+.+++.+||
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999987544 7999999999999999987776 99999999999999999
Q ss_pred ccc
Q 012806 453 TSI 455 (456)
Q Consensus 453 i~~ 455 (456)
|++
T Consensus 420 i~~ 422 (528)
T 3u4j_A 420 VAL 422 (528)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 10
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=5.1e-86 Score=688.74 Aligned_cols=396 Identities=35% Similarity=0.561 Sum_probs=375.8
Q ss_pred CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (456)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~ 134 (456)
+...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 344579999999987666 999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (456)
Q Consensus 135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (456)
+.++|++++++|+|||..++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999933799999999999999998876665432 235678899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
+++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|.+.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888899999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 373 (456)
+++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCC-eEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNA-TLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD 451 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga-~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e 451 (456)
+++++||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|+++.+ +||||++|+.+++.+|
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 417 (498)
T 4f3x_A 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417 (498)
T ss_dssp GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999 999999875568999999999999999977775 9999999999999999
Q ss_pred cccc
Q 012806 452 CTSI 455 (456)
Q Consensus 452 ai~~ 455 (456)
||++
T Consensus 418 Ai~~ 421 (498)
T 4f3x_A 418 AVAW 421 (498)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.3e-85 Score=687.42 Aligned_cols=397 Identities=36% Similarity=0.664 Sum_probs=376.1
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHHHH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG---PWPKMTPYERSRIMLRAADLIE 133 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~iL~~~a~~l~ 133 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 4578999999988788999999999999999999999999999999999999743 7999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc-C--C-CCCcceEEEeeccceEEEEccCCchH
Q 012806 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P--G-DGNYHIQTLHEPIGVAGQIVPWNFPL 209 (456)
Q Consensus 134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~P~Gvv~~i~p~N~P~ 209 (456)
++.++|++++++|+|||..+++ .|+..+++.++||+++++++.+... + . ..+...++.++|+|||++|+|||||+
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 9999999999999999999997 6999999999999999988765441 1 1 23557889999999999999999999
Q ss_pred HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHH
Q 012806 210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289 (456)
Q Consensus 210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 289 (456)
.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|..|+++|+|+||||+.+|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (456)
Q Consensus 290 i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g 369 (456)
|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 324 (503)
T 3iwj_A 246 IMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324 (503)
T ss_dssp HHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCC
Confidence 9999988 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806 370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL 446 (456)
Q Consensus 370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~ 446 (456)
||+++++++||++++++++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|+++.+ +||||++|+.|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 404 (503)
T 3iwj_A 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTF 404 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEe
Confidence 9999999999999999999999999999999999999998644 57999999999999999977775 99999999999
Q ss_pred ccccccccc
Q 012806 447 CVVTDCTSI 455 (456)
Q Consensus 447 ~~~~eai~~ 455 (456)
++.+|||++
T Consensus 405 ~~~deAi~~ 413 (503)
T 3iwj_A 405 STEEEAIDL 413 (503)
T ss_dssp SSHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999875
No 12
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=5.5e-86 Score=688.80 Aligned_cols=396 Identities=57% Similarity=0.964 Sum_probs=374.9
Q ss_pred CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~ 217 (456)
+|++++++|+|||..++...|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987657999999999999999888776655444455678999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh-h
Q 012806 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K 296 (456)
Q Consensus 218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a-~ 296 (456)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.+..|..|++||+|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999988889999999999999999999999999999998 6
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~ 376 (456)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+.+.+ +||||++|+.|++.+|||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764346999999999999999977775 99999999999999999975
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.8e-85 Score=686.01 Aligned_cols=394 Identities=37% Similarity=0.659 Sum_probs=373.2
Q ss_pred ccCceeCCEEeeCCCCCe-eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 57 YTKNLINGQFVDAASGKT-FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
..++||||+|+.+.++++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 356899999997767788 99999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
.++|++++++|+|||..+++ .|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 99999999999999999997 69999999999999999887665544333446788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ ++++.|..|++||+|+||||+.+|+.|++.++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 254 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987 89999999999999999999999999999999
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 255 ~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 333 (503)
T 1a4s_A 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--G----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV 448 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~ 448 (456)
+++||++++++++++.++|++++++|+++++||+.. . ..|+|++||||.+++++|+.+.+ +||||++|+.+++
T Consensus 334 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (503)
T 1a4s_A 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT 413 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCC
Confidence 999999999999999999999999999999999764 2 36999999999999999977775 9999999999999
Q ss_pred ccccccc
Q 012806 449 VTDCTSI 455 (456)
Q Consensus 449 ~~eai~~ 455 (456)
.+|||++
T Consensus 414 ~deAi~~ 420 (503)
T 1a4s_A 414 EEEVLQR 420 (503)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
No 14
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.7e-85 Score=684.70 Aligned_cols=394 Identities=34% Similarity=0.545 Sum_probs=370.6
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRS 102 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999999887888999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEE-eeccceEEEEccCCchHHHHHhH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
++|++++++|+|||..+++..|+..+++.++|++............. .+...++. ++|+|||++|+|||||+.+.+++
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 103 SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999975699999999999998876644332221 23446777 99999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|.+.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ ++||+++|+|||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 262 ~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 N-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred h-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 8999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCc-ccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD-RLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD 451 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e 451 (456)
+++||++++++++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|+++.+ +||||++|+.|+|.+|
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 9999999999999999999999999999999994 322 36999999999999999977775 9999999999999999
Q ss_pred cccc
Q 012806 452 CTSI 455 (456)
Q Consensus 452 ai~~ 455 (456)
||++
T Consensus 420 Ai~~ 423 (497)
T 3i44_A 420 AVTL 423 (497)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 15
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.4e-85 Score=686.21 Aligned_cols=397 Identities=32% Similarity=0.529 Sum_probs=375.4
Q ss_pred CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (456)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~ 134 (456)
....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRE 87 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (456)
Q Consensus 135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (456)
+.++|++++++|+|||..+++ .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 88 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 88 NKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence 999999999999999999998 699999999999999998877665543 245678899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 373 (456)
+++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++
T Consensus 247 aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~ 325 (497)
T 3k2w_A 247 SAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325 (497)
T ss_dssp HTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcc--cCC--CCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR--LGN--RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV 448 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~ 448 (456)
+++++||++++++++++.++|++++++|+++++||.+ .+. +|+|++|||+.+++++|+.+.+ +||||++|+.+++
T Consensus 326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (497)
T 3k2w_A 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS 405 (497)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999973 222 6999999999999999977775 9999999999999
Q ss_pred ccccccc
Q 012806 449 VTDCTSI 455 (456)
Q Consensus 449 ~~eai~~ 455 (456)
.+|||++
T Consensus 406 ~deAi~~ 412 (497)
T 3k2w_A 406 MEQAIEF 412 (497)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
No 16
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=9.1e-85 Score=684.72 Aligned_cols=392 Identities=31% Similarity=0.537 Sum_probs=374.2
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999986 788999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHh-hhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW-ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
.++|++++++|+|||..+++ .|+..+++.++||++. .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 99999999999999999998 5999999999999998 566666666544567789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCC------CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806 295 AKSN------LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (456)
Q Consensus 295 a~~~------~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~ 368 (456)
++ + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 6 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC 447 (456)
Q Consensus 369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~ 447 (456)
|||+|+++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|+++.+ +||||++|+.++
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 999999875447999999999999999977775 999999999999
Q ss_pred cccccccc
Q 012806 448 VVTDCTSI 455 (456)
Q Consensus 448 ~~~eai~~ 455 (456)
+.+|||++
T Consensus 430 ~~deAi~~ 437 (538)
T 3qan_A 430 DFDHALEI 437 (538)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999975
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.2e-85 Score=685.14 Aligned_cols=391 Identities=37% Similarity=0.625 Sum_probs=372.7
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 91 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRERN 91 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999999888889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhH----hcCcccCCCCCcceEEEeeccceEEEEccCCchHHHH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (456)
++|++++++|+|||..++ |+..+++.++||++++++ +.+...+...+. .++.++|+|||++|+|||||+.+.
T Consensus 92 ~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~ 167 (517)
T 3r31_A 92 DALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIA 167 (517)
T ss_dssp HHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHH
Confidence 999999999999999887 999999999999999988 766665544455 899999999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (456)
Q Consensus 213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 292 (456)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.|++||+|+||||+.+|+.|++
T Consensus 168 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 168 CWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 8889999999999999999999999999999
Q ss_pred HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (456)
Q Consensus 293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~ 372 (456)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 247 ~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 325 (517)
T 3r31_A 247 AAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325 (517)
T ss_dssp HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred Hhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV 448 (456)
Q Consensus 373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~ 448 (456)
|+++++||++++++++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|+++.+ +||||++|+.|+|
T Consensus 326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999993121 37999999999999999977775 9999999999999
Q ss_pred ccccccc
Q 012806 449 VTDCTSI 455 (456)
Q Consensus 449 ~~eai~~ 455 (456)
.+|||++
T Consensus 406 ~deAi~~ 412 (517)
T 3r31_A 406 EDEVLAR 412 (517)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.5e-85 Score=679.23 Aligned_cols=396 Identities=33% Similarity=0.551 Sum_probs=374.7
Q ss_pred CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999776778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
.++|++++++|+|||+.+++ .|+..+++.++||++.+++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 161 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR 161 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence 99999999999999999997 6999999999999998887776654432 244678999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..|+++|+|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 241 (479)
T 2imp_A 162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241 (479)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778899999999999999999999999999999
Q ss_pred hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC-
Q 012806 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK- 373 (456)
Q Consensus 295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~- 373 (456)
++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 242 a~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 242 AK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred hc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC 452 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea 452 (456)
+++++||++++.+++++.++|++++++|+++++||+..+..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999763346999999999999999977775 99999999999999999
Q ss_pred ccc
Q 012806 453 TSI 455 (456)
Q Consensus 453 i~~ 455 (456)
|++
T Consensus 401 i~~ 403 (479)
T 2imp_A 401 ISM 403 (479)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 19
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=7.9e-85 Score=682.92 Aligned_cols=393 Identities=39% Similarity=0.659 Sum_probs=373.7
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999877788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
+|++++++|+|||..+++ .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 799999999999999998877765554 335567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 296 (456)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999878899999999999999999999999999999998
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~ 376 (456)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--------CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--------NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC 447 (456)
Q Consensus 377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~ 447 (456)
++||++++++++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|+.+.+ +||||++|+.++
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 999977775 999999999999
Q ss_pred cccccccc
Q 012806 448 VVTDCTSI 455 (456)
Q Consensus 448 ~~~eai~~ 455 (456)
|.+|||++
T Consensus 422 ~~deAi~~ 429 (515)
T 2d4e_A 422 DEEEALRK 429 (515)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999975
No 20
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.2e-84 Score=677.63 Aligned_cols=395 Identities=36% Similarity=0.614 Sum_probs=376.3
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
++|++++++|+|||..+++ .|+..+++.++||+....+..+...+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999999998 699999999999999887776665543 23566789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+ +++|+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 999999999999999999999999999999999865556899999999999999977775 9999999999999999987
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 405 ~ 405 (481)
T 3jz4_A 405 Q 405 (481)
T ss_dssp H
T ss_pred H
Confidence 5
No 21
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.1e-85 Score=684.14 Aligned_cols=396 Identities=28% Similarity=0.429 Sum_probs=373.4
Q ss_pred CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (456)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~ 134 (456)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3446899999999887889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (456)
Q Consensus 135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (456)
+.++|++++++|+|||..+++ .|+..+++.++||++..+.+.+...+ ...+...++.++|+|||++|+|||||+.+.+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 999999999999999999998 69999999999999988777665433 2235567899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.|++||+|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 5566999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhhcCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPF 372 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~~g~p~ 372 (456)
+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|+
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 998 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL----GNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC 447 (456)
Q Consensus 373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~ 447 (456)
++++++||++++++++++.++|++++++|+++++||.+. ..+|+|++||||.+++++|+++.+ +||||++|+.++
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 247999999999999999977775 999999999999
Q ss_pred cccccccc
Q 012806 448 VVTDCTSI 455 (456)
Q Consensus 448 ~~~eai~~ 455 (456)
+.+|||++
T Consensus 419 ~~deAi~~ 426 (521)
T 4e4g_A 419 NYEEALSL 426 (521)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999975
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.2e-84 Score=675.93 Aligned_cols=392 Identities=35% Similarity=0.598 Sum_probs=370.6
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997655 8999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
+|++++++|+|||..+++..|+..+++.++||++++++..++..+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 99999999999999998744999999999999999888766554432 24467889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 296 (456)
++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999998
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~ 376 (456)
++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+++
T Consensus 260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHcC-CeEEeCCc-ccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806 377 EQGPQIDPEQFQKVLRYIRSGIESN-ATLECGGD-RLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT 453 (456)
Q Consensus 377 ~~Gpli~~~~~~~v~~~i~~a~~~G-a~v~~gg~-~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai 453 (456)
++||++++.+++++.++|++++++| +++++||. .. +.|+|++||||.+++++|+.+.+ +||||++|+.++|.+|||
T Consensus 339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999 99999997 53 36999999999999999977775 999999999999999998
Q ss_pred cc
Q 012806 454 SI 455 (456)
Q Consensus 454 ~~ 455 (456)
++
T Consensus 418 ~~ 419 (495)
T 1wnd_A 418 NW 419 (495)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 23
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.7e-84 Score=678.40 Aligned_cols=389 Identities=30% Similarity=0.477 Sum_probs=369.9
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887789999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--C----CcceEEEeeccceEEEEccCCchHH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--G----NYHIQTLHEPIGVAGQIVPWNFPLL 210 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~N~P~~ 210 (456)
++|++++++|+|||..+++ .|+..+++.++||++..++..+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 9999999999999999998 5999999999999999988766544322 1 4567889999999999999999999
Q ss_pred HHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHH
Q 012806 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (456)
Q Consensus 211 ~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 290 (456)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||++|+|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCC
Q 012806 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (456)
Q Consensus 291 ~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~ 370 (456)
++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 98876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccc
Q 012806 371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVV 449 (456)
Q Consensus 371 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~ 449 (456)
|+ +++++||++++++++++.++|++++++|+++++||+. .|+|++|||+.+++++|+++.+ +||||++|+.|+|.
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 5899999999999999977775 99999999999999
Q ss_pred cccccc
Q 012806 450 TDCTSI 455 (456)
Q Consensus 450 ~eai~~ 455 (456)
+|||++
T Consensus 401 deAi~~ 406 (505)
T 3prl_A 401 NEAISL 406 (505)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.9e-84 Score=676.55 Aligned_cols=396 Identities=39% Similarity=0.674 Sum_probs=377.5
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+++.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2ve5_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
++|++++++|+|||..+++..|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus 84 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~ 163 (490)
T 2ve5_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKS 163 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHHHH
Confidence 99999999999999999984599999999999999998877665554456678899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH-h
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA-A 295 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~-a 295 (456)
++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|+|++.+.++.|..|++||+|+||||+.+|+.|++.+ +
T Consensus 164 ~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a 243 (490)
T 2ve5_A 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASS 243 (490)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchh
Confidence 999999999999999999999999999999999999999999998889999999999999999999999999999998 7
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
. ++||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 244 ~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~ 322 (490)
T 2ve5_A 244 S-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp H-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
+++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|+++.+ +||||++|+.|++.+
T Consensus 323 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~d 402 (490)
T 2ve5_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHH
Confidence 9999999999999999999999999999999997632 36999999999999999977775 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 403 eAi~~ 407 (490)
T 2ve5_A 403 EAIRR 407 (490)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 25
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-83 Score=669.95 Aligned_cols=392 Identities=30% Similarity=0.478 Sum_probs=371.0
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
++|++++++|+|||..+++. |+..+++.++|+++..+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999984 999999999999999988777665532 346788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.+.++.|+.|+++|+|+||||+.+|+.|.+.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~ 373 (456)
+++ ++||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC 452 (456)
Q Consensus 374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea 452 (456)
+++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|+.+.+ +||||++|+.+++.+||
T Consensus 322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 398 (485)
T 4dng_A 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA 398 (485)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999976 6899999999999999977775 99999999999999999
Q ss_pred ccc
Q 012806 453 TSI 455 (456)
Q Consensus 453 i~~ 455 (456)
|++
T Consensus 399 i~~ 401 (485)
T 4dng_A 399 IDM 401 (485)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=9e-84 Score=671.08 Aligned_cols=391 Identities=34% Similarity=0.559 Sum_probs=370.5
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+. ++++++||.||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999998643 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
+|++++++|+|||..+++ .|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999998 599999999999999988877665443 234567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEe---CCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS---GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 293 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+ |++.+.++.|.+|++||+|+||||+.+|+.|.+.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8777889999999999999999999999999999
Q ss_pred HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh-hhcCCCC
Q 012806 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPF 372 (456)
Q Consensus 294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~ 372 (456)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCc-eEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY-FVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~-~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
++++++||++++.+++++.++|++++++|+++++||... +.|+ |++|||+.+++++|+.+.+ +||||++|+.+++.+
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999764 3689 9999999999999977765 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 406 eAi~~ 410 (487)
T 2w8n_A 406 EAIAI 410 (487)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 27
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.1e-83 Score=669.06 Aligned_cols=392 Identities=27% Similarity=0.469 Sum_probs=368.9
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
.+++||||+|+. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI 98 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 458899999984 678999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (456)
++|++++++|+|||..+++ .|+..+++.++|+++..+++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 99 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 99 QVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 9999999999999999986 6999999999999998877766654432 2445678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (456)
Q Consensus 216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 291 (456)
+++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|..|+++|+|+||||+.+|+.|+
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999988876 46999999999999 788999999999999999999999999999
Q ss_pred HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (456)
Q Consensus 292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 371 (456)
+.+++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEE 415 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHH
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHH
Confidence 9999999999999999999999999999999999999864456999999999999999977775 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 416 eAi~~ 420 (500)
T 2j6l_A 416 EVFAW 420 (500)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 28
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.9e-83 Score=665.85 Aligned_cols=392 Identities=33% Similarity=0.523 Sum_probs=369.6
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999776788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
+|++++++|+|||..+++ .|+..+++.++||++..+.+.+...+ ...+...++.++|+|||++|+|||||+.+.++++
T Consensus 84 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 84 ELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 999999999999999987 69999999999999877776665433 2234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 296 (456)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~ 241 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 56789999999999999999999999999999988
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcc-cccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR-TYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|++++
T Consensus 242 -~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp -TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred -cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 89999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT 453 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai 453 (456)
+++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999997432 36999999999999999977775 999999999999999999
Q ss_pred cc
Q 012806 454 SI 455 (456)
Q Consensus 454 ~~ 455 (456)
++
T Consensus 400 ~~ 401 (486)
T 1t90_A 400 EI 401 (486)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3e-83 Score=665.99 Aligned_cols=381 Identities=29% Similarity=0.479 Sum_probs=357.7
Q ss_pred ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (456)
Q Consensus 60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 139 (456)
+||||+|+++ ++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999863 56 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (456)
Q Consensus 140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A 219 (456)
++++++|+|||..+++ .|+..+++.++||+++++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999998 6999999999999999988776665544 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (456)
Q Consensus 220 LaaGN~vvlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 295 (456)
|++||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998875
Q ss_pred hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (456)
Q Consensus 296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~ 375 (456)
+||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++++++++.++|++++++|+++++||.. .|+|++|||+ +++++|+++.+ +||||++|+.+++ +|||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 99999977775 9999999999999 99987
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 387 ~ 387 (486)
T 3pqa_A 387 I 387 (486)
T ss_dssp H
T ss_pred H
Confidence 5
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.6e-83 Score=668.39 Aligned_cols=393 Identities=34% Similarity=0.524 Sum_probs=372.6
Q ss_pred CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 88 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEEH 88 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHh
Confidence 345799999999888889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (456)
.++|++++++|+|||..+++ .|+..+++.++|+++..++..+ ..+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 89 ~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 166 (508)
T 3r64_A 89 REEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSI 166 (508)
T ss_dssp HHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 99999999999999999998 5999999999999998877666 44432 34678899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806 214 WKVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (456)
Q Consensus 214 ~~~~~ALaaGN~vvlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 292 (456)
+++++||++||+||+|||+.+|+++ ..+++++.++|+|+|++|+|+|++.+.++.|+.|+++|+|+||||+.+|+.|++
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~ 246 (508)
T 3r64_A 167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246 (508)
T ss_dssp HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999988899999999999999999999999999998
Q ss_pred HHhhC-CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806 293 LAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (456)
Q Consensus 293 ~~a~~-~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 371 (456)
.+++. ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 247 ~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 326 (508)
T 3r64_A 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDP 326 (508)
T ss_dssp HHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCC
Confidence 88742 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
.++++++||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus 327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (508)
T 3r64_A 327 SAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEA 403 (508)
T ss_dssp TSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred ccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 5899999999999999977775 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|||++
T Consensus 404 eAi~~ 408 (508)
T 3r64_A 404 HAAEL 408 (508)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 31
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.9e-83 Score=669.98 Aligned_cols=390 Identities=32% Similarity=0.517 Sum_probs=367.8
Q ss_pred cCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
.++||||+|+. ++++++++||. ||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999985 46799999999 6999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC--CCCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
++|++++++|+|||..+++ .|+..+++.++||++.++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999998 69999999999999999888775532 22345678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|.+.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred h------hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806 295 A------KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (456)
Q Consensus 295 a------~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~ 368 (456)
+ + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 273 a~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 273 GRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp TSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 8 4 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC 447 (456)
Q Consensus 369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~ 447 (456)
||| ++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|+.+.+ +||||++|+.++
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 899999753346999999999999999977765 999999999999
Q ss_pred cccccccc
Q 012806 448 VVTDCTSI 455 (456)
Q Consensus 448 ~~~eai~~ 455 (456)
|.+|||++
T Consensus 430 ~~~eAi~~ 437 (516)
T 1uzb_A 430 DFAEALEV 437 (516)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999975
No 32
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=8e-83 Score=662.52 Aligned_cols=377 Identities=27% Similarity=0.399 Sum_probs=362.4
Q ss_pred eeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 012806 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQ 153 (456)
Q Consensus 74 ~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 153 (456)
+++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCC
Q 012806 154 SLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (456)
Q Consensus 154 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~ 233 (456)
++ .|+..+++.++||++.+++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 69999999999999999888877655445667899999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (456)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i 313 (456)
+|+++..|++++.++|+|+|++|+|+|++.+.++ |+.|++||+|+||||+.+|+.|++.+++ ++||+++|+|||+|+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998888888 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY 393 (456)
Q Consensus 314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~ 393 (456)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++++++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
|++++++|+++++||...+.+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 382 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQL 382 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHH
Confidence 999999999999999865568999999999999999977775 99999999999999999975
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-83 Score=665.22 Aligned_cols=392 Identities=34% Similarity=0.557 Sum_probs=370.5
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 84 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRK 84 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 35789999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 216 (456)
++|++++++|+|||..+++..|+..+++.++|+++.+.+..+... +...++.++|+|||++|+|||||+.+.++++
T Consensus 85 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 85 DDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 999999999999999999547999999999999999887765432 2357889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 296 (456)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|..|+++|+|+||||+.+|+.|.+.+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~ 240 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999887
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~ 376 (456)
+++|+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 241 -~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 241 -DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp -TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred -cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC 452 (456)
Q Consensus 377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea 452 (456)
++||++++++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA 399 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA 399 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence 999999999999999999999999999999994322 46999999999999999977775 99999999999999999
Q ss_pred ccc
Q 012806 453 TSI 455 (456)
Q Consensus 453 i~~ 455 (456)
|++
T Consensus 400 i~~ 402 (478)
T 3ty7_A 400 IQI 402 (478)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.1e-82 Score=661.95 Aligned_cols=386 Identities=29% Similarity=0.488 Sum_probs=364.5
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+.+ +++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.+
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 37899999986543 999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CC----cce-EEEeeccceEEEEccCCchHHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GN----YHI-QTLHEPIGVAGQIVPWNFPLLL 211 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~N~P~~~ 211 (456)
+|++++++|+|||..+++ .|+..+++.++||++++++..+...+.+ .+ ... ++.++|+|||++|+|||||+.+
T Consensus 81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 999999999999999987 6999999999999998887766543322 23 355 8999999999999999999999
Q ss_pred HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (456)
Q Consensus 212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 291 (456)
.++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+.++.|..|+++|+|+||||+.+|+.|.
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (456)
Q Consensus 292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p 371 (456)
+.++ +||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT 450 (456)
Q Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ 450 (456)
+| ++++||++++++++++.++|++++++|+++++||.. .|+|++||||.+++++|+.+.+ +||||++|+.++|.+
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 99 999999999999999999999999999999999975 5899999999999999977775 999999999999999
Q ss_pred ccccc
Q 012806 451 DCTSI 455 (456)
Q Consensus 451 eai~~ 455 (456)
|+|++
T Consensus 393 eai~~ 397 (475)
T 1euh_A 393 EAIEI 397 (475)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2e-82 Score=662.71 Aligned_cols=387 Identities=27% Similarity=0.417 Sum_probs=366.1
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 137 (456)
.++||||+|+.+. ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++..+|.++|+++++.|+++.+
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999998653 78999999999999999999999999999999999962 49999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC---CC--CcceEEEeeccceEEEEccCCchHHHH
Q 012806 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG---DG--NYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (456)
Q Consensus 138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (456)
+|++++++|+|||..+++ .|+..+++.++||++++++..+...+. .+ +...++.++|+|||++|+|||||+.+.
T Consensus 96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174 (501)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence 999999999999999998 699999999999999998877665443 22 336789999999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (456)
Q Consensus 213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 292 (456)
++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ ++++.|..|+++|+|+||||+.+|+.|++
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977 88999999999999999999999999999
Q ss_pred HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (456)
Q Consensus 293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~ 372 (456)
.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 254 ~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 330 (501)
T 1uxt_A 254 VGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330 (501)
T ss_dssp HHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence 876 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCC-ceEecEEEecCC---CChHhhhc-cccceEEeEEEc
Q 012806 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVT---VSFISLLQ-FLIPIFSFIILC 447 (456)
Q Consensus 373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g-~~i~PtVl~~v~---~~~~~~~~-~fgPv~~vv~~~ 447 (456)
|+++++||++++++++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|+.+.+ +||||++|+.++
T Consensus 331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~ 407 (501)
T 1uxt_A 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407 (501)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence 99999999999999999999999999999999999975 58 999999999999 99977775 999999999999
Q ss_pred cccccccc
Q 012806 448 VVTDCTSI 455 (456)
Q Consensus 448 ~~~eai~~ 455 (456)
|.+|||++
T Consensus 408 ~~deAi~~ 415 (501)
T 1uxt_A 408 DLDQAIEL 415 (501)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999975
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.1e-82 Score=659.55 Aligned_cols=390 Identities=27% Similarity=0.367 Sum_probs=368.2
Q ss_pred CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (456)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 138 (456)
++||||+|+++ ++.+++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999975 357899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (456)
Q Consensus 139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ 218 (456)
|++++++|+|||..+++ .|+..+++.++|+++..++..+...+...+...+..++|+|||++|+|||||+.+.++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999998 69999999999999988877766543223345677799999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (456)
Q Consensus 219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 298 (456)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.|+++|+|+||||+.+|+.|.+.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67899999999999999999999999999999888 8
Q ss_pred CccE-EEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHHhhhhcCC-CCCCC
Q 012806 299 LKPV-TLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGD-PFKSG 375 (456)
Q Consensus 299 ~~~v-~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~~~~~~g~-p~~~~ 375 (456)
++|+ ++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~ 454 (456)
+++||++++++++++.++|++++++|+++++||...+.+|+|++|||+. ++++|+.+.+ +||||++|+.|++.+|||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999998766689999999998 9999977765 9999999999999999987
Q ss_pred c
Q 012806 455 I 455 (456)
Q Consensus 455 ~ 455 (456)
+
T Consensus 400 ~ 400 (490)
T 3ju8_A 400 E 400 (490)
T ss_dssp H
T ss_pred H
Confidence 5
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=8.8e-82 Score=663.52 Aligned_cols=395 Identities=23% Similarity=0.333 Sum_probs=366.7
Q ss_pred CCccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806 55 ISYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (456)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~ 133 (456)
....++||||+|+.+ +..+.++||.| |+++++++.++.+|+++||++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~ 136 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS 136 (563)
T ss_dssp CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 345689999999864 45778999998 899999999999999999999999999 8999999999999999999999
Q ss_pred Hh-HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHH
Q 012806 134 KN-MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (456)
Q Consensus 134 ~~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (456)
++ +++|+.++++|+|||..+++..++..++++++||++.+.++.+.... .+.+...+.++.|+|||++|+|||||+..
T Consensus 137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence 98 99999999999999999998544999999999999999888765432 22233456667788999999999999999
Q ss_pred HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (456)
Q Consensus 212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 291 (456)
..+++++|| +||+||+|||+.+|+++..++++|+++|+|+|++|+|+|++.++++.|..|++|++|+||||+.+|+.|.
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999 5999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHhhCCCc------cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806 292 ELAAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365 (456)
Q Consensus 292 ~~~a~~~~~------~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~ 365 (456)
+.+++ ++| |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++
T Consensus 296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 99998 777 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEE
Q 012806 366 RIVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFS 442 (456)
Q Consensus 366 ~~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~ 442 (456)
+++||| .|+++++||++++.+++++.++|+++++ +|+++++||.....+|+|++|||+.+++++|+++.+ +||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~ 454 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT 454 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence 999999 9999999999999999999999999996 899999999876668999999999999999977775 9999999
Q ss_pred eEEEcc--ccccccc
Q 012806 443 FIILCV--VTDCTSI 455 (456)
Q Consensus 443 vv~~~~--~~eai~~ 455 (456)
|+.|++ .+|||++
T Consensus 455 V~~~~d~~~deAi~~ 469 (563)
T 4e3x_A 455 VYVYPDDKYRETLKL 469 (563)
T ss_dssp EEEECGGGHHHHHHH
T ss_pred EEEECCCCHHHHHHH
Confidence 999997 5898875
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.2e-80 Score=641.02 Aligned_cols=380 Identities=26% Similarity=0.414 Sum_probs=361.1
Q ss_pred CCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Q 012806 71 SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150 (456)
Q Consensus 71 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 150 (456)
+..+++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 456899999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEec
Q 012806 151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230 (456)
Q Consensus 151 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKp 230 (456)
..+++ .|+..+++.++||++..++..+.......+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99998 69999999999999998887766532223556789999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC
Q 012806 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310 (456)
Q Consensus 231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~ 310 (456)
|+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+|||+
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999999 56778899999999999999999999999999998 8999999999999
Q ss_pred ceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHH
Q 012806 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390 (456)
Q Consensus 311 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v 390 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++++++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 391 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
.++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|||++
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 385 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALAL 385 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHH
Confidence 999999999999999999866667999999999999999977775 99999999999999999975
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.3e-79 Score=678.37 Aligned_cols=393 Identities=30% Similarity=0.465 Sum_probs=371.5
Q ss_pred ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (456)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~ 135 (456)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999986 578999999998 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (456)
Q Consensus 136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (456)
+++|+.++++|+|||..++. .|+..++++++||+..++++.+...+. ..+...+..++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 99999999999999999998 699999999999999998877654332 3456678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (456)
Q Consensus 215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 294 (456)
++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|.+.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999998
Q ss_pred hh-----CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (456)
Q Consensus 295 a~-----~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g 369 (456)
+. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 83 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806 370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV 448 (456)
Q Consensus 370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~ 448 (456)
+|.|+++++||+|++.+++++.++|++++++| ++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.+++
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999999 999999765445999999999999999977665 9999999999999
Q ss_pred ccccccc
Q 012806 449 VTDCTSI 455 (456)
Q Consensus 449 ~~eai~~ 455 (456)
.+|+|++
T Consensus 925 ~deAI~~ 931 (1026)
T 4f9i_A 925 FDQAIEW 931 (1026)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=6.8e-79 Score=633.20 Aligned_cols=379 Identities=27% Similarity=0.387 Sum_probs=353.5
Q ss_pred CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 012806 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG 148 (456)
Q Consensus 69 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G 148 (456)
+.+++|++++||.|||++++++.++.+|+++||++|++||+ .|++++..+|.++|+++++.|++|+++|++++++|+|
T Consensus 2 ~a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 79 (474)
T 4h7n_A 2 NAMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTG 79 (474)
T ss_dssp CCCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHS
T ss_pred CCCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred CChhhhhhccHHHHHHHHHHHHHhhhHhcCccc-C-CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEE
Q 012806 149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226 (456)
Q Consensus 149 k~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~v 226 (456)
|+... . .|+..++..+++|++...+...... . ...+...+..++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 80 k~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~V 157 (474)
T 4h7n_A 80 RLSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAV 157 (474)
T ss_dssp CSHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEE
T ss_pred CcHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCce
Confidence 98644 3 5999999999999988877654332 2 22344567788999999999999999999999999999999999
Q ss_pred EEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEec
Q 012806 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL 306 (456)
Q Consensus 227 vlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lel 306 (456)
|+|||+.+|.++..+++++.++|+|+|++++++| +.+.+..|..| +|+|+||||+.+|+.|++.+++ ++||+++|+
T Consensus 158 VlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lEl 233 (474)
T 4h7n_A 158 VVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLEL 233 (474)
T ss_dssp EEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEEC
T ss_pred eecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccC
Confidence 9999999999999999999999999999999999 66778888865 9999999999999999999998 899999999
Q ss_pred CCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHH
Q 012806 307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQ 386 (456)
Q Consensus 307 gG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~ 386 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++|++|+++|+++++++++|+|.++++++||++++.+
T Consensus 234 GGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 313 (474)
T 4h7n_A 234 GGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQ 313 (474)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHH
T ss_pred CCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 387 FQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 387 ~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|+.+.| +||||++|+.|+|.||||++
T Consensus 314 ~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 384 (474)
T 4h7n_A 314 AGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYL 384 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHH
Confidence 99999999999999999999997643 56899999999999999977776 99999999999999999975
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.1e-78 Score=639.96 Aligned_cols=389 Identities=23% Similarity=0.300 Sum_probs=351.5
Q ss_pred cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (456)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 136 (456)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999996544 589999999999999999987 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCc-------ccCCC--CCcceEEEeecc-ceEEEEccCC
Q 012806 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-------TVPGD--GNYHIQTLHEPI-GVAGQIVPWN 206 (456)
Q Consensus 137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N 206 (456)
++|++++++|+|||..+++ .|+..+++.++||+..++++.+. ..+.. +....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 9999999999999999997 59999999999999988766432 12221 222457889997 9999999999
Q ss_pred chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285 (456)
Q Consensus 207 ~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 285 (456)
||+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+++..| +++|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 89999999999665433332 5799999999999
Q ss_pred HHHHHHHHHh-hCCCccEEEecCCCCceEEcCCC-----CHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHH
Q 012806 286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359 (456)
Q Consensus 286 ~g~~i~~~~a-~~~~~~v~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l 359 (456)
+|+.|++.++ ..++||+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998764 23899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCceEecEEEecCCCC--hH
Q 012806 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL------GNRGYFVQPTVFSDVTVS--FI 431 (456)
Q Consensus 360 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~------~~~g~~i~PtVl~~v~~~--~~ 431 (456)
+++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... ...|+|++||||.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6899999999742 136999999999999987 45
Q ss_pred hhhc-cccceEEeEEEc---cc-----cccccc
Q 012806 432 SLLQ-FLIPIFSFIILC---VV-----TDCTSI 455 (456)
Q Consensus 432 ~~~~-~fgPv~~vv~~~---~~-----~eai~~ 455 (456)
++.+ +||||++|+.|+ |. +|||++
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~ 431 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVAL 431 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHH
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHH
Confidence 6665 999999999999 99 999875
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.9e-75 Score=599.65 Aligned_cols=369 Identities=25% Similarity=0.332 Sum_probs=327.2
Q ss_pred CCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 012806 72 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151 (456)
Q Consensus 72 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~ 151 (456)
-..+++.||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||.
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK 82 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 34678999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhhhccHHHHHHHHHHHHHhhhHhcCcc-cCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEE
Q 012806 152 VQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227 (456)
Q Consensus 152 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vv 227 (456)
.+++..|+..+++.++|+++...+..... ... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 162 (457)
T 3lns_A 83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI 162 (457)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 99875699999999999999887765432 221 12456789999999999999999999999999999999999999
Q ss_pred EecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecC
Q 012806 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG 307 (456)
Q Consensus 228 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelg 307 (456)
+|||+.+|+++..+++++.++ +|+|++|+|+| +.+.+..|++ +++|+|+||||+.+|+.|++.+++ ++||+++|+|
T Consensus 163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElG 238 (457)
T 3lns_A 163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELG 238 (457)
T ss_dssp EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECC
T ss_pred EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECC
Confidence 999999999999999999999 99999999999 7788899998 789999999999999999999988 8999999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHH
Q 012806 308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQF 387 (456)
Q Consensus 308 G~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 387 (456)
||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++++++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 7766 99999999999
Q ss_pred HHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 388 QKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 388 ~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
+++.++|+++ ++++++||... ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 378 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQ 378 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHH
Confidence 9999999986 35999999753 36899999999999999977765 99999999999999999975
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.8e-75 Score=611.48 Aligned_cols=380 Identities=22% Similarity=0.280 Sum_probs=343.4
Q ss_pred CCccCceeCCEEeeCCCCCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (456)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~ 133 (456)
+...++||||+|+.+.+ ++||.||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34458999999986432 89999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh--cCccc----CC---CCCcceEEEeeccceEEEEcc
Q 012806 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI--HGLTV----PG---DGNYHIQTLHEPIGVAGQIVP 204 (456)
Q Consensus 134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p 204 (456)
++.++|++++++|+|||..+++ .|+..+++.++||++.+++. .+... +. ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 9999999999999999999987 69999999999999988772 22221 11 122346889999999999999
Q ss_pred CCchHHHHH--hHHHHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEE
Q 012806 205 WNFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278 (456)
Q Consensus 205 ~N~P~~~~~--~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v 278 (456)
||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.+.++.|+.|++||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 468999999999999888899999999999999
Q ss_pred EEecChhHHHHHHHHHhhCCC--ccEEEecCCCCceEEcCCC---CHHHHHHHHHHHhhhcCCCccccCcccccccc-cH
Q 012806 279 SFTGHCDTGKIVQELAAKSNL--KPVTLELGGKSPFIIFDDA---DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VY 352 (456)
Q Consensus 279 ~ftGs~~~g~~i~~~~a~~~~--~~v~lelgG~~~~iV~~da---D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~ 352 (456)
+||||+.+|+.|.+.+++ ++ ||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999998 78 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCC---
Q 012806 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVS--- 429 (456)
Q Consensus 353 ~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~--- 429 (456)
|+|+++|++++++++. ++.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999998764 367899999888888877763 479999999975 6999999999988887
Q ss_pred hHhhhc-cccceEEeEEEccccccccc
Q 012806 430 FISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 430 ~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
|+++.+ +||||++|+.|++.+|||++
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~ 432 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEEL 432 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHH
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHH
Confidence 666665 99999999999999999875
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=8.9e-74 Score=599.46 Aligned_cols=369 Identities=18% Similarity=0.251 Sum_probs=337.4
Q ss_pred CCCCCeeeeecCCCCceE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 012806 69 AASGKTFPVYDPRTAEVI-ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN 147 (456)
Q Consensus 69 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 147 (456)
+.++++++++||.||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 456789999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhhccHHHHHHHHHHHHHhhhH--hcCccc----CC--CCC-cceEEEeeccceEEEEccCCchHHHH--HhHH
Q 012806 148 GKPYVQSLKSEVPMVVRLLHYYAGWADK--IHGLTV----PG--DGN-YHIQTLHEPIGVAGQIVPWNFPLLLF--TWKV 216 (456)
Q Consensus 148 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~~ 216 (456)
|||..+++ .|+..+++.++||++.+++ ..+... +. +.+ ...++.++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998886 6999999999999998875 433322 11 112 23578999999999999999999985 4999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806 217 APALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (456)
Q Consensus 217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 292 (456)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.+.+..|..|++||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999988889999999999999999999999999999
Q ss_pred HHhhCCC--ccEEEecCCCCceEEcCCCCHH--HHHHHHHHHhhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhh
Q 012806 293 LAAKSNL--KPVTLELGGKSPFIIFDDADVD--QAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRI 367 (456)
Q Consensus 293 ~~a~~~~--~~v~lelgG~~~~iV~~daD~d--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~ 367 (456)
.+++ ++ ||+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9988 65 9999999999999999999999 99999999999999999999999999999 99999999999999877
Q ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCceEecEEEecCCCC---hHhhhc-cccceEE
Q 012806 368 VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVTVS---FISLLQ-FLIPIFS 442 (456)
Q Consensus 368 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~---~~~~~~-~fgPv~~ 442 (456)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |+.+.+ +||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688999999999999999984 7999999996 2899999999988777 867765 9999999
Q ss_pred eEEEccccccccc
Q 012806 443 FIILCVVTDCTSI 455 (456)
Q Consensus 443 vv~~~~~~eai~~ 455 (456)
|+.|+|.+|+|++
T Consensus 385 v~~~~~~deai~~ 397 (510)
T 1ez0_A 385 IVVCENVADMLSL 397 (510)
T ss_dssp EEEESSHHHHHHH
T ss_pred EEEeCCHHHHHHH
Confidence 9999999999875
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=8e-73 Score=585.70 Aligned_cols=351 Identities=25% Similarity=0.353 Sum_probs=320.8
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHH
Q 012806 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (456)
Q Consensus 92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 171 (456)
.+.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++..|+..++..++|++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467799999999999999 899999999999999999999999999999999999999999876799999999998887
Q ss_pred hhhHhcCccc----CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 012806 172 WADKIHGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247 (456)
Q Consensus 172 ~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~ 247 (456)
...+...... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 6655432211 111234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHH
Q 012806 248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA 327 (456)
Q Consensus 248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i 327 (456)
+ +|+|++|+|+|++ +.+..|+.| ++|+|+||||+.+|+.|++.+++ ++||+++|+|||+|+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 445567777 89999999999999999999998 899999999999999999999999999999
Q ss_pred HHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeC
Q 012806 328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECG 407 (456)
Q Consensus 328 ~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 407 (456)
++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||++++++++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999988 599999999999999999999999998 69999999
Q ss_pred CcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 408 GDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 408 g~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
|... ..|+|++|||+.+++++|+++.| +||||++|+.+++.+|||++
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 370 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQF 370 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHH
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHH
Confidence 9864 46999999999999999977775 99999999999999999975
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.8e-70 Score=606.12 Aligned_cols=358 Identities=30% Similarity=0.416 Sum_probs=335.7
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHH
Q 012806 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168 (456)
Q Consensus 89 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 168 (456)
++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..++++++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 889999999999999999999 89999999999999999999999999999999999999999997 699999999999
Q ss_pred HHHhhhHhcCcc--cCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH
Q 012806 169 YAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246 (456)
Q Consensus 169 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~ 246 (456)
|+...++..+.. .+...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998877654 333446678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC--CCccEEEecCCCCceEEcCCCCHHHHH
Q 012806 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS--NLKPVTLELGGKSPFIIFDDADVDQAV 324 (456)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~~v~lelgG~~~~iV~~daD~d~aa 324 (456)
++|+|+|++|+|+|++.+ +..|+.||+|++|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998877 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 012806 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL 404 (456)
Q Consensus 325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v 404 (456)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc--ccccccc
Q 012806 405 ECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV--VTDCTSI 455 (456)
Q Consensus 405 ~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~--~~eai~~ 455 (456)
+||... +.|+|++|||+.+ ++|+.+.+ +||||++|+.|++ .+|+|++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~ 908 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRA 908 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHH
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHH
Confidence 888753 4599999999974 66756664 9999999999997 5888864
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.3e-65 Score=526.50 Aligned_cols=341 Identities=20% Similarity=0.228 Sum_probs=295.2
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHH-H
Q 012806 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL-H 167 (456)
Q Consensus 89 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 167 (456)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 8999999999999999999999999999999999999999998755777777766 4
Q ss_pred HHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH-
Q 012806 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH- 246 (456)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~- 246 (456)
++... +..+ ..+.+.+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 1222334557889999999999999999999999999999999999999999999999999888876
Q ss_pred ---HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHH
Q 012806 247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323 (456)
Q Consensus 247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~a 323 (456)
++|+|+|++++|+|++.+.++.|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998889999999999999999999998654 4454 78999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Q 012806 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT 403 (456)
Q Consensus 324 a~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 403 (456)
++.+++++|+|+||.|++++|||||+++||+|+++|+++ .||++++++++++.++|+.+...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 38999999999999999877667878
Q ss_pred EEeCCccc---CCCCceEecEE-------EecCCCChHhhhccccceEEeEEEccccccccc
Q 012806 404 LECGGDRL---GNRGYFVQPTV-------FSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 404 v~~gg~~~---~~~g~~i~PtV-------l~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~ 455 (456)
+ +||... ...|+|++||+ +.+++++++...|+||||++|+.++|.+|||++
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~ 356 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQ 356 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHH
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHH
Confidence 6 477532 13589999997 668999996555799999999999999999975
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=8.6e-65 Score=525.91 Aligned_cols=343 Identities=17% Similarity=0.208 Sum_probs=300.6
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHH
Q 012806 88 NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH 167 (456)
Q Consensus 88 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 167 (456)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|.++.++|++++++|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999 89999999999999999999999999999999999999998876445555555554
Q ss_pred HHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHH----
Q 012806 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK---- 243 (456)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~---- 243 (456)
++....+ ..+. ...+.+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 4433221 1111 122345678899999999999999999999999999999999999999999999999998665
Q ss_pred HHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecC-CCCceEEcCCCCHHH
Q 012806 244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG-GKSPFIIFDDADVDQ 322 (456)
Q Consensus 244 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelg-G~~~~iV~~daD~d~ 322 (456)
++.++|+|+|++++|+|.+.+.++.|+.|++||+|+||||+.+ .+.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 4688999999999999988899999999999999999999874 445555 88999 7777 999999999999999
Q ss_pred HHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHH-------hhhhcCCCC-CCCCccCCCCCHHHHHHHHHHH
Q 012806 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA-------MRRIVGDPF-KSGVEQGPQIDPEQFQKVLRYI 394 (456)
Q Consensus 323 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~Gpli~~~~~~~v~~~i 394 (456)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999985 567899998 7889999999999999999999
Q ss_pred HHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEcccccccc
Q 012806 395 RSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTS 454 (456)
Q Consensus 395 ~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~ 454 (456)
+.++.+|+++++||.. +++++|+...|+||||++|+.++|.+|||+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~ 360 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYSREKLAPILAFYTAETWQEACE 360 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCcccccccCceEEEEEeCCHHHHHH
Confidence 9999999999999853 678888544459999999999999999973
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-63 Score=513.16 Aligned_cols=328 Identities=18% Similarity=0.144 Sum_probs=262.3
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------
Q 012806 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN------- 147 (456)
Q Consensus 75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~------- 147 (456)
--++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~ 86 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL 86 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence 35789999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChh----hhhhccHHHHHHHHHHHHHhhhHhcCcccCCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHh
Q 012806 148 GKPYV----QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (456)
Q Consensus 148 Gk~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 220 (456)
|||.. ++. .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+||| |...+ +++++||
T Consensus 87 Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 87 AAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp CHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 79987 455 6999999999999988877766653321 3445688999999999999887 87777 8999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806 221 TCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (456)
Q Consensus 221 aaGN~vvlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 296 (456)
++||+||+|||+.+|+++..|+++++++ | |+|++|+|+| +.++++.|..|++||+|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 7788999999999999999999999999998876
Q ss_pred CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (456)
Q Consensus 297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~ 376 (456)
+||+++|+|||+|+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d----------------------- 294 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR----------------------- 294 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
||+ + .+++++++++|++++.|+.. ...|+|+ +++|+++.+ +||||++|+.|+|.+|||++
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 333 2 34588888999999855432 2235553 567866665 99999999999999999975
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=9.6e-62 Score=502.25 Aligned_cols=320 Identities=15% Similarity=0.128 Sum_probs=272.6
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhccHHH-HHHHHHHH
Q 012806 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLKSEVPM-VVRLLHYY 169 (456)
Q Consensus 95 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~ 169 (456)
..+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..++|+
T Consensus 14 ~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~ 91 (468)
T 1vlu_A 14 SSSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM 91 (468)
T ss_dssp CHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred hhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence 357899999999999 8999999999999999999999999999999999999998 7775468888 89999999
Q ss_pred HHhhhHhc------CcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHH
Q 012806 170 AGWADKIH------GLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240 (456)
Q Consensus 170 ~~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~ 240 (456)
++..++.. +...+. +.+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..
T Consensus 92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 169 (468)
T 1vlu_A 92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFRE 169 (468)
T ss_dssp HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 98887765 443221 12445688999999999999999 9 9999999999999999999999999999999
Q ss_pred HHHHHH----H----cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCce
Q 012806 241 VAKLFH----E----AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312 (456)
Q Consensus 241 l~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~ 312 (456)
++++++ + +|+|+|++|+|+ ++.++++.|..|++||+|+||||+.+|+.|.+.+ +||+++|+|||+|+
T Consensus 170 l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~ 244 (468)
T 1vlu_A 170 MAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 244 (468)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccce
Confidence 999995 8 999999999999 6778899999999999999999999999998765 69999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc---CCCCCCCCccCCCCCHHHHHH
Q 012806 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFKSGVEQGPQIDPEQFQK 389 (456)
Q Consensus 313 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~---g~p~~~~~~~Gpli~~~~~~~ 389 (456)
||++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |||.+
T Consensus 245 iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 245 YLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---------------- 306 (468)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred EECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence 999999999999999999999999 99999999999999 9999999999999997 87643
Q ss_pred HHHH-HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 390 VLRY-IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 390 v~~~-i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
.++ |++++ ++++||. | ++|||+ ++++|+.+.+ +||||++|+.++|.+|||++
T Consensus 307 -~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 360 (468)
T 1vlu_A 307 -KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQH 360 (468)
T ss_dssp -HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHH
T ss_pred -hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHH
Confidence 345 66665 4677875 4 799997 7888977765 99999999999999999975
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.4e-58 Score=474.86 Aligned_cols=312 Identities=18% Similarity=0.174 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhhh-------ccHHHH
Q 012806 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMV 162 (456)
Q Consensus 94 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 162 (456)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5799999999999999 89999999999999999999999999999999999999853 4442 378899
Q ss_pred HHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHH
Q 012806 163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239 (456)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~ 239 (456)
++.+++++++.+. .+...+. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 9999999988754 2333321 23556789999999999999998 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806 240 YVAKLF----HEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (456)
Q Consensus 240 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV 314 (456)
.+++++ .++|+|+|++|+|+|.+. +.++.|..|++||+|+||||+.+|+.+.+.+ +||+++|+|||+|+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 789999999999998665 5788898999999999999999999998764 6999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc---CCCCCCCCccCCCCCHHHHHHHH
Q 012806 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFKSGVEQGPQIDPEQFQKVL 391 (456)
Q Consensus 315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~---g~p~~~~~~~Gpli~~~~~~~v~ 391 (456)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |||.+ .
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------R 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------H
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------H
Confidence 9999999999999999999999 9999999999999999999999999999988 76531 3
Q ss_pred HHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 392 ~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
++|+++. . | ++ ++++|+.+.+ +||||++|+.|+|.+|||++
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~ 359 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEH 359 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHH
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHH
Confidence 5565542 1 2 12 3456766665 99999999999999999975
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.7e-58 Score=473.65 Aligned_cols=311 Identities=18% Similarity=0.224 Sum_probs=270.6
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------ccHHH
Q 012806 93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLK-------SEVPM 161 (456)
Q Consensus 93 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~ 161 (456)
..+++++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 45789999999999999 8999999999999999999999999999999999999985 45431 48999
Q ss_pred HHHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHH
Q 012806 162 VVRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238 (456)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~ 238 (456)
+++.++||+++.++ .+...+. +.+...++.++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 4443331 23445688999999999999886 478999999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806 239 LYVAKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (456)
Q Consensus 239 ~~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i 313 (456)
..+++++. ++|+|+|++|+|+|. +.+.++.|..|++||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 689999999999984 466889999999999999999999999998876 589999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY 393 (456)
Q Consensus 314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~ 393 (456)
|++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999987652
Q ss_pred HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806 394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI 455 (456)
Q Consensus 394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~ 455 (456)
+.||.+. .+ |+ ||| ++++|+.+.+ +||||++|+.++|.+|||++
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 342 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEH 342 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHH
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHH
Confidence 2244321 12 33 886 3456756665 99999999999999999975
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=90.58 E-value=14 Score=36.46 Aligned_cols=164 Identities=18% Similarity=0.129 Sum_probs=95.2
Q ss_pred CCcceEEEeeccceEEEEccCC-chH-HHHHhHHHHHhhcCCE-EEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806 185 GNYHIQTLHEPIGVAGQIVPWN-FPL-LLFTWKVAPALTCGNT-IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (456)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p~N-~P~-~~~~~~~~~ALaaGN~-vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (456)
.|......+.|+--|++-.|.- +|+ .+.+..++||-.+|+. +|+..++..-...-.+.-..+.+|.. .+..-.
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~----eIy~vG 194 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVD----RVFRIG 194 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCC----EEECCC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCc----EEEEcC
Confidence 4556678889999999999943 332 3456678999999997 34433322222223344455667655 344433
Q ss_pred chhhHHHHhc----CCCccEEEEecChhHHHHHHHHHhhCCCccEEEec-CCCCceEE--cCCCCHHHHHHHHHHHhhhc
Q 012806 262 GPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL-GGKSPFII--FDDADVDQAVELAHFALFYN 334 (456)
Q Consensus 262 ~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lel-gG~~~~iV--~~daD~d~aa~~i~~~~~~~ 334 (456)
|.+.-.+|.- -+.||+|+=.|..-+...= ++.. + .|-.++ -|.+=++| ++.+|.+.++..++.-+=..
T Consensus 195 GAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK-r~v~--g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 195 GAQAVAALAYGTETVPRVDKIVGPGNIYVATAK-KLVF--G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHB--T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred ChhhhhhhccCCCcccceeEEecCCcHHHHHHH-HHhc--C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 5555555543 5789999999976554321 1221 1 233332 35554444 44589999888877766554
Q ss_pred CCCccccCcccccccccHHHHHHHHHHHHh
Q 012806 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAM 364 (456)
Q Consensus 335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~ 364 (456)
.. + +.++|..+ ++|.++..+.+.
T Consensus 270 ~~----a-~~iLvT~s--~~la~~V~~~i~ 292 (423)
T 4gic_A 270 ED----A-QAILISPD--AAHLEAVQASIE 292 (423)
T ss_dssp TT----C-EEEEEESC--HHHHHHHHHHHH
T ss_pred CC----C-eEEEEeCc--HHHHHHHHHHHH
Confidence 32 2 23556555 444554444443
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=74.49 E-value=3.4 Score=36.02 Aligned_cols=123 Identities=16% Similarity=0.091 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHHH-HHhHHHHHHHHHHhcCCCh-hhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEe
Q 012806 116 MTPYERSRIMLRAADLI-EKNMEELAALETWNNGKPY-VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193 (456)
Q Consensus 116 ~~~~~R~~iL~~~a~~l-~~~~~~la~~~~~e~Gk~~-~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (456)
+..+.|.+.++++...= -+..++|++.+..+ |-.. .||- .+...+++.--..+...+...|...
T Consensus 29 ~k~~~r~~~I~eiI~~~~I~TQeEL~~~L~~~-Gi~viTQAT-------------vSRDIkELglvKv~~~~G~~~Y~lp 94 (180)
T 3v4g_A 29 EKQDNLVRAFKALLKEERFGSQGEIVEALKQE-GFENINQSK-------------VSRMLTKFGAVRTRNAKMEMVYCLP 94 (180)
T ss_dssp -CHHHHHHHHHHHHHHTCCCSHHHHHHHHHHT-TCTTCCHHH-------------HHHHHHHTTCEEEECTTSCEEEECC
T ss_pred ccHHHHHHHHHHHHhhCCcCCHHHHHHHHHHC-CCcccCHHH-------------HHHHHHHcCCEEeeCCCCCEEEEeC
Confidence 45566665555443221 23578899988775 7766 6664 2233333333334433333333332
Q ss_pred eccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 012806 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262 (456)
Q Consensus 194 ~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~ 262 (456)
...+.-. ..-++. ..+...-.+||-+|+|..|-. +..++.++...++|++++-.|.|++
T Consensus 95 ~~~~~~~----~~~~l~---~~vvsv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 95 TELGVPT----VSSSLR---ELVLDVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp ------C----TTCCTG---GGEEEEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred Ccccchh----HHHHHH---HHEEEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 2111100 011111 112223347999999988766 6888899998889999999999853
No 55
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=67.62 E-value=1e+02 Score=30.55 Aligned_cols=193 Identities=17% Similarity=0.138 Sum_probs=104.3
Q ss_pred cHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccC-CchH-HHHHhHHHHHhhcCCEEEEecCCCch
Q 012806 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPW-NFPL-LLFTWKVAPALTCGNTIVLKSAEQTP 235 (456)
Q Consensus 158 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~-N~P~-~~~~~~~~~ALaaGN~vvlKps~~~p 235 (456)
-+..+.+.++.|...... ..-......|......+.|+--|++-.|. .+|+ .+.+...+||-.+|+.=|+-.+|-.
T Consensus 87 ai~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~- 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP- 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSS-
T ss_pred HHHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCC-
Confidence 344455556656443321 11011111255667788999999999995 3332 4556678999999997655433311
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHh----cCCCccEEEEecChhHHHHHHHHHhhCCCccEEEec-CCCC
Q 012806 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA----SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL-GGKS 310 (456)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lel-gG~~ 310 (456)
..-.+.-..+.+|.. .+..-.|.+.-.+|. +-|.||+|.=.|..-+... .++... ....|-.++ -|.+
T Consensus 165 -i~p~iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A-Kr~Vs~-~~G~VgIDm~AGPS 237 (434)
T 1kae_A 165 -IADEILYAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA-KRQVSQ-RLDGAAIDMPAGPS 237 (434)
T ss_dssp -CCHHHHHHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH-HHHHHH-CTTSCEESCCCCCC
T ss_pred -CCHHHHHHHHHcCCC----EEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH-HHHhHh-hcCccccCCCCCCc
Confidence 222333445667655 344333555545554 3588999999997654322 112211 112333333 3555
Q ss_pred ceEE--cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccc--cHHHHHHHHHHHHh
Q 012806 311 PFII--FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER--VYDEFVEKAKARAM 364 (456)
Q Consensus 311 ~~iV--~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~--v~~~f~~~l~~~~~ 364 (456)
=++| ++++|.+..+..++.-+=... .+. .++|..+ ..++..+.+.+++.
T Consensus 238 EilViAD~tAnp~~vAaDLLsQAEHd~----~a~-aiLvT~s~~la~~V~~ev~~ql~ 290 (434)
T 1kae_A 238 EVLVIADSGATPDFVASDLLSQAEHGP----DSQ-VILLTPAADMARRVAEAVERQLA 290 (434)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTTCT----TCE-EEEEESCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCCHHHHHHHHHHHhccCC----CCc-EEEEECCHHHHHHHHHHHHHHHH
Confidence 5444 446899998888777665443 222 3555444 24444444444433
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=65.94 E-value=7.8 Score=32.82 Aligned_cols=114 Identities=14% Similarity=0.064 Sum_probs=75.6
Q ss_pred ceEEEEccC-CchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhhHHHHhcCC
Q 012806 197 GVAGQIVPW-NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVSG-YGPTAGAALASHM 273 (456)
Q Consensus 197 Gvv~~i~p~-N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~L~~~~ 273 (456)
|.|+++..- .=+-...+.+-...+..|..++-= .-|+ +.|++ .|+|...++=++. .++++++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 655555443 345555666667777789988862 2333 55556 7999665553332 23456666655 7
Q ss_pred CccEEEEecC-------hhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCC
Q 012806 274 DVDKLSFTGH-------CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336 (456)
Q Consensus 274 ~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G 336 (456)
.|++|.||-+ ..-+..|.+.+.. +..|+.--+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 9999999876 3467888888888 667776543 567788888877764
No 57
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=64.95 E-value=40 Score=28.22 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.9
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (456)
Q Consensus 222 aGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (456)
+||-+|+|..|-. +..++.++...++|. ++-.|.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999998766 688899999988875 99999885
No 58
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=61.02 E-value=47 Score=28.52 Aligned_cols=125 Identities=19% Similarity=0.203 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHHHHH----hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcc-eEE
Q 012806 117 TPYERSRIMLRAADLIEK----NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH-IQT 191 (456)
Q Consensus 117 ~~~~R~~iL~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 191 (456)
.-.+|.+ ++.+.|.+ ..++|++++..+ |-...||- .+...+++.--..+...|.. .|.
T Consensus 17 ~K~~R~~---~I~~iI~~~~I~tQeEL~~~L~~~-Gi~vTQAT-------------lSRDikEL~lvKv~~~~G~~~~Y~ 79 (170)
T 3lap_A 17 NRAGRQA---RIVAILSSAQVRSQNELAALLAAE-GIEVTQAT-------------LSRDLEELGAVKLRGADGGTGIYV 79 (170)
T ss_dssp CHHHHHH---HHHHHHHHSCCCSHHHHHHHHHHT-TCCCCHHH-------------HHHHHHHHTCEEECCTTCTTCEEE
T ss_pred CHHHHHH---HHHHHHHhCCCCCHHHHHHHHHHc-CCCcCchh-------------HHHHHHHcCcEEeecCCCCEEEEE
Confidence 3445554 44445543 578899988775 87777764 22333344433444333333 343
Q ss_pred EeeccceEEEEccCCchHHHH-HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 012806 192 LHEPIGVAGQIVPWNFPLLLF-TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262 (456)
Q Consensus 192 ~~~P~Gvv~~i~p~N~P~~~~-~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~ 262 (456)
.....+..-...++.-.+... -..+...-.+||-+|+|..+-. +..++.++...++| +++-.|-|++
T Consensus 80 lp~~~~~~~~~~~~~~~l~~~l~~~v~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGDD 147 (170)
T 3lap_A 80 VPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGDD 147 (170)
T ss_dssp CCC------CCTTHHHHHHHHHHHHCCEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECSS
T ss_pred ECcccccccccccHHHHHHHHHHHheeEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecCC
Confidence 322111100000000011111 1112223357999999998766 68888999988877 7999998853
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=57.73 E-value=9.2 Score=33.22 Aligned_cols=118 Identities=18% Similarity=0.022 Sum_probs=79.2
Q ss_pred eecc-ceEEEEccCC-chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhhHHH
Q 012806 193 HEPI-GVAGQIVPWN-FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVSG-YGPTAGAA 268 (456)
Q Consensus 193 ~~P~-Gvv~~i~p~N-~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~ 268 (456)
.-|. |.|+++..-+ =+-...+.+-...+..|..++- |.-|+ ++|.+ .|+|...++=++. ..+++++.
T Consensus 23 ~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d~ 93 (178)
T 1vmd_A 23 FMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGAM 93 (178)
T ss_dssp EECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHH
T ss_pred eCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHHH
Confidence 3444 7666655543 4566666677777888998886 44444 55555 7999665543332 23456666
Q ss_pred HhcCCCccEEEEecC-------hhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCC
Q 012806 269 LASHMDVDKLSFTGH-------CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336 (456)
Q Consensus 269 L~~~~~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G 336 (456)
+.+ ..|++|.||-+ ..-+..|.+.|.. +..|+.--+ ..++.++.+.+++..
T Consensus 94 I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 94 IAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 655 79999999976 3357889998888 667776543 567888888888764
No 60
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=56.70 E-value=40 Score=23.07 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 012806 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALET 144 (456)
Q Consensus 92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~ 144 (456)
.+.++.+..+++.-.|...|+|... -.|+-+...|.+-+|.|+.-+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4667777888888888888999875 5688888888888888887653
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=54.75 E-value=5.1 Score=33.20 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=52.8
Q ss_pred HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhhHHHHhcCCCccEEEEecC----
Q 012806 210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVS-GYGPTAGAALASHMDVDKLSFTGH---- 283 (456)
Q Consensus 210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~-g~~~~~~~~L~~~~~v~~v~ftGs---- 283 (456)
...+.+-...+..|..++- |.-|+ +.|.+ .|+|-..++=++ +.++++++.+.+ ..+++|.||-+
T Consensus 18 ~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~ 87 (134)
T 2xw6_A 18 MVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTA 87 (134)
T ss_dssp HHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTC
T ss_pred HHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccC
Confidence 3334444455556776664 33344 45555 799977666555 434567666665 79999999976
Q ss_pred ---hhHHHHHHHHHhhCCCccEEE
Q 012806 284 ---CDTGKIVQELAAKSNLKPVTL 304 (456)
Q Consensus 284 ---~~~g~~i~~~~a~~~~~~v~l 304 (456)
..-+..|.+.+.. +..|+.-
T Consensus 88 ~~h~~D~~~IrR~A~~-~~IP~~T 110 (134)
T 2xw6_A 88 QPHEPDVQALLRVCDV-HGVPLAT 110 (134)
T ss_dssp CTTSCCSHHHHHHHHH-HTCCEEC
T ss_pred CCccchHHHHHHHHHH-cCCCeEc
Confidence 2345777777777 5566654
No 62
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=50.13 E-value=20 Score=29.82 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC-c----hhhHHHHhcCCCccEEEEecCh-----hHHHHHHH
Q 012806 223 GNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY-G----PTAGAALASHMDVDKLSFTGHC-----DTGKIVQE 292 (456)
Q Consensus 223 GN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~-~----~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~ 292 (456)
|-.++- |.-| ++.|.+.|+|...|+-++.. . +.+.+.+.+ .+|++|.+|-+. .-+..|.+
T Consensus 50 Gf~i~A-----T~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 50 GFKLFA-----TEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TCEEEE-----EHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCEEEE-----CchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHH
Confidence 777664 2333 45667899998777766542 2 567666655 789999998655 36778888
Q ss_pred HHhhCCCccEEEe
Q 012806 293 LAAKSNLKPVTLE 305 (456)
Q Consensus 293 ~~a~~~~~~v~le 305 (456)
.+.. +..|++-.
T Consensus 120 ~Av~-~~IP~~T~ 131 (143)
T 2yvq_A 120 TAVD-SGIPLLTN 131 (143)
T ss_dssp HHHH-TTCCEECS
T ss_pred HHHH-hCCCeEcC
Confidence 8888 66777654
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=46.86 E-value=34 Score=24.64 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.4
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (456)
Q Consensus 222 aGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (456)
+||-+|+|..|-. +..++.++.+.++|+ ++..+-|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6999999988766 688899999988885 89999885
No 64
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=45.97 E-value=38 Score=24.96 Aligned_cols=36 Identities=33% Similarity=0.561 Sum_probs=30.5
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (456)
Q Consensus 222 aGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (456)
++|-+|+|..|-. +..++.++.+.++|+ ++..|-|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999998766 688899999988875 89999885
No 65
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=43.87 E-value=26 Score=31.63 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=44.8
Q ss_pred HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHH
Q 012806 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287 (456)
Q Consensus 213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 287 (456)
+..++-.+.+||-||++.+. +-....+..+|... +|.+.+++++.. .+- ...-..+.+.++.+...-
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP 87 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIP 87 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccC
Confidence 45667788899999999876 34455667778887 999999998652 221 112334566666654443
No 66
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=42.33 E-value=36 Score=25.36 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=30.5
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (456)
Q Consensus 222 aGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (456)
+||-+|+|..|-. +..++.++.+.++|+ ++..|-|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988766 688999999987775 89999885
No 67
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=40.90 E-value=32 Score=25.37 Aligned_cols=38 Identities=21% Similarity=0.444 Sum_probs=31.9
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 012806 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262 (456)
Q Consensus 222 aGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~ 262 (456)
+||-+|+|..+-. +..++.++.+.+.+++++..|-|++
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 6899999988665 6788888888878889999999853
No 68
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=36.62 E-value=25 Score=29.94 Aligned_cols=52 Identities=19% Similarity=0.240 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcC--CCccEEEEecChhHHH
Q 012806 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH--MDVDKLSFTGHCDTGK 288 (456)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~v~ftGs~~~g~ 288 (456)
.....+.+++.+.|...-...+++.+ ..+.+.|... .+.|.|..||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34677889999999877777888776 7776666542 3689999999876544
No 69
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=33.28 E-value=44 Score=27.24 Aligned_cols=50 Identities=20% Similarity=0.124 Sum_probs=34.1
Q ss_pred CcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEE
Q 012806 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT 303 (456)
Q Consensus 253 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~ 303 (456)
|.+.+++|+..+.-....+..++..+.+||+......+.+.+.+ ...|++
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~-~~ipvl 102 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE-RGVPVI 102 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH-HTCCEE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH-CCCeEE
Confidence 56777778665543333332579999999998888888887766 334443
No 70
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=32.59 E-value=37 Score=29.00 Aligned_cols=54 Identities=19% Similarity=0.055 Sum_probs=37.0
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHh---cCCCccEEEEecChhHH
Q 012806 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA---SHMDVDKLSFTGHCDTG 287 (456)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~---~~~~v~~v~ftGs~~~g 287 (456)
.-..+.+|+++|.+.|+..-...+++.+-..+.+++. ...+.|.|..||+...+
T Consensus 38 ~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 38 VDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred CcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 3456788999999999876666666654444544443 34568999999976543
No 71
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=31.82 E-value=16 Score=31.33 Aligned_cols=54 Identities=20% Similarity=0.204 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhc---CCCccEEEEecChhHH
Q 012806 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS---HMDVDKLSFTGHCDTG 287 (456)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~---~~~v~~v~ftGs~~~g 287 (456)
.-..+..+.++|.+.|+......+++.+-..+.+.|.. ..+.|.|..||++..+
T Consensus 29 ~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 29 TDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 34566778899999998766566676554455555543 1268999999987544
No 72
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=29.77 E-value=25 Score=30.71 Aligned_cols=55 Identities=20% Similarity=0.138 Sum_probs=38.9
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcC--CCccEEEEecChhHHH
Q 012806 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH--MDVDKLSFTGHCDTGK 288 (456)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~v~ftGs~~~g~ 288 (456)
.-.....+.+++.+.|...-...+++.+-..+.+.|... .+.|.|..||++..+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 344567888999999987666677776555565555442 5689999999887554
No 73
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=22.47 E-value=43 Score=28.85 Aligned_cols=57 Identities=16% Similarity=0.025 Sum_probs=38.5
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhc---CCCccEEEEecChhHHH
Q 012806 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS---HMDVDKLSFTGHCDTGK 288 (456)
Q Consensus 232 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~---~~~v~~v~ftGs~~~g~ 288 (456)
...-.....+.++|.+.|...-...+++.+-..+.+.|.. ..+.|.|..||++..+.
T Consensus 36 ~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3444567788899999998765566676655555555543 22489999999876543
No 74
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=21.12 E-value=62 Score=25.91 Aligned_cols=80 Identities=4% Similarity=-0.037 Sum_probs=49.9
Q ss_pred HHHHHhhhcCCCcccc--CcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc-------cCCCCCHHHHHHHHHHHHH
Q 012806 326 LAHFALFYNQGQCCCA--GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE-------QGPQIDPEQFQKVLRYIRS 396 (456)
Q Consensus 326 ~i~~~~~~~~GQ~C~a--~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~-------~Gpli~~~~~~~v~~~i~~ 396 (456)
..+.......+-.|.. ....|++...++++.+++.+.+..+---+|..++.. ..|-.+...+ ..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~---~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVY---QALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHH---HHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHH---HHHHHH
Confidence 3344444444434443 233489999999999999999998766677765542 2233344444 456677
Q ss_pred HHHcCCeEEeCC
Q 012806 397 GIESNATLECGG 408 (456)
Q Consensus 397 a~~~Ga~v~~gg 408 (456)
.+++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 778886666555
No 75
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=20.81 E-value=21 Score=35.24 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhc-CCCccEEEEecChhHHHH
Q 012806 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS-HMDVDKLSFTGHCDTGKI 289 (456)
Q Consensus 235 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~-~~~v~~v~ftGs~~~g~~ 289 (456)
-.....+..++++.|...-.+.+++.+-..+.+.|.. ..+.|.|..||++..|..
T Consensus 210 Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~~ 265 (396)
T 1wu2_A 210 ETNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGDK 265 (396)
T ss_dssp CCHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC--------
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCChh
Confidence 3445678888999987665566666544444444432 124799999998877653
Done!