Query 012808
Match_columns 456
No_of_seqs 293 out of 2150
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 16:38:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012808.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012808hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cdqa1 c.73.1.3 (A:25-328) As 100.0 1.4E-76 1E-80 591.2 31.7 301 80-380 2-302 (304)
2 d2j0wa1 c.73.1.3 (A:3-294) Asp 100.0 1.1E-71 8.4E-76 552.8 26.1 287 81-379 1-291 (292)
3 d2hmfa1 c.73.1.3 (A:2-303) Asp 100.0 1.4E-69 1E-73 540.0 33.2 291 83-379 2-301 (302)
4 d2brxa1 c.73.1.3 (A:1-225) Uri 100.0 5E-30 3.7E-34 243.3 13.4 205 81-377 1-225 (225)
5 d2a1fa1 c.73.1.3 (A:2-237) Uri 99.9 6.2E-26 4.5E-30 215.1 24.7 212 81-375 6-235 (236)
6 d2ij9a1 c.73.1.3 (A:1-219) Uri 99.9 1.2E-25 8.6E-30 211.8 17.0 203 81-376 1-219 (219)
7 d2akoa1 c.73.1.3 (A:2-251) Glu 99.9 3.5E-25 2.6E-29 212.6 10.4 216 82-369 2-232 (250)
8 d1ybda1 c.73.1.3 (A:6-241) Uri 99.9 2.9E-23 2.1E-27 195.7 21.6 214 81-376 5-235 (236)
9 d1z9da1 c.73.1.3 (A:4-241) Uri 99.8 5.9E-20 4.3E-24 171.9 20.8 219 79-378 3-238 (238)
10 d2bufa1 c.73.1.2 (A:2-301) N-a 99.8 1.1E-18 7.8E-23 171.6 20.0 235 81-378 27-297 (300)
11 d2ap9a1 c.73.1.2 (A:6-296) N-a 99.8 2.2E-18 1.6E-22 168.3 18.0 237 81-377 26-290 (291)
12 d2btya1 c.73.1.2 (A:1-282) N-a 99.8 3.4E-18 2.5E-22 166.4 18.9 234 81-378 22-280 (282)
13 d1e19a_ c.73.1.1 (A:) Carbamat 99.6 9.6E-15 7E-19 143.5 16.4 114 258-377 182-313 (313)
14 d1b7ba_ c.73.1.1 (A:) Carbamat 99.5 3.8E-14 2.8E-18 138.3 13.5 95 276-375 200-307 (307)
15 d1gs5a_ c.73.1.2 (A:) N-acetyl 99.5 1.1E-13 8.3E-18 129.7 15.8 233 82-376 4-257 (258)
16 d2cdqa2 d.58.18.10 (A:329-419) 99.4 2.7E-13 1.9E-17 109.8 7.5 64 384-447 2-65 (91)
17 d2hmfa3 d.58.18.10 (A:304-403) 99.3 2.4E-12 1.8E-16 105.8 8.7 71 382-452 2-75 (100)
18 d2j0wa2 d.58.18.10 (A:295-385) 99.3 1.1E-12 8.1E-17 106.1 5.1 63 383-445 2-64 (91)
19 d2hmfa2 d.58.18.10 (A:404-470) 99.0 1.4E-10 1E-14 88.2 6.3 53 395-447 1-55 (67)
20 d2cdqa3 d.58.18.10 (A:420-494) 98.7 2.4E-09 1.7E-13 83.0 3.5 51 396-447 2-54 (75)
21 d2j0wa3 d.58.18.10 (A:386-449) 98.7 4.9E-09 3.6E-13 78.7 4.0 53 395-447 1-53 (64)
22 d2f06a2 d.58.18.11 (A:1-70) Hy 94.9 0.027 2E-06 41.6 6.3 54 398-454 6-62 (70)
23 d2f06a1 d.58.18.11 (A:71-141) 92.8 0.11 8.3E-06 38.1 6.2 50 405-455 6-59 (71)
24 d1zhva2 d.58.18.8 (A:62-127) H 91.7 0.14 1E-05 37.1 5.5 56 397-453 4-60 (66)
25 d2fgca2 d.58.18.6 (A:27-104) A 91.4 0.17 1.2E-05 38.0 5.7 49 405-453 10-64 (78)
26 d1zpva1 d.58.18.7 (A:1-83) UPF 88.9 0.63 4.6E-05 34.5 7.3 33 396-431 3-35 (83)
27 d2f1fa1 d.58.18.6 (A:2-77) Ace 88.2 0.2 1.5E-05 37.3 3.9 48 406-453 9-62 (76)
28 d2pc6a2 d.58.18.6 (A:1-77) Ace 87.6 0.19 1.4E-05 37.6 3.4 49 405-453 9-63 (77)
29 d1ygya3 d.58.18.1 (A:452-529) 87.0 0.59 4.3E-05 34.5 6.0 47 406-453 11-62 (78)
30 d1sc6a3 d.58.18.1 (A:327-410) 81.8 0.73 5.3E-05 34.4 4.4 25 406-430 19-43 (84)
31 d1y7pa2 d.58.18.12 (A:2-78) Hy 81.4 1.1 8E-05 32.9 5.3 45 398-445 4-55 (77)
32 d1u8sa1 d.58.18.5 (A:2-87) put 80.9 1.1 7.8E-05 33.5 5.1 44 395-441 5-52 (86)
33 d1zvpa2 d.58.18.9 (A:68-131) H 80.4 2.5 0.00018 30.0 6.6 50 396-446 4-53 (64)
34 d1u8sa2 d.58.18.5 (A:88-180) p 70.6 2.9 0.00021 31.4 5.1 30 398-430 9-38 (93)
35 d2ftsa3 c.57.1.2 (A:499-653) G 57.3 12 0.00086 30.4 6.9 72 205-306 28-99 (155)
36 d2qmwa2 d.58.18.3 (A:185-264) 55.4 10 0.00076 27.5 5.6 38 405-442 9-51 (80)
37 d2nqra3 c.57.1.2 (A:178-326) M 49.6 29 0.0021 27.9 8.2 70 205-306 28-97 (149)
38 d1uz5a3 c.57.1.2 (A:181-328) M 42.4 38 0.0028 27.0 7.8 70 205-306 28-97 (148)
39 d1phza1 d.58.18.3 (A:19-115) P 31.0 23 0.0017 26.6 4.1 38 406-443 24-66 (97)
40 d1k1ea_ c.108.1.5 (A:) Probabl 25.9 19 0.0014 29.9 2.9 50 304-367 7-58 (177)
41 d1jxha_ c.72.1.2 (A:) 4-amino- 24.9 73 0.0053 27.6 7.2 41 81-124 72-112 (266)
No 1
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00 E-value=1.4e-76 Score=591.16 Aligned_cols=301 Identities=83% Similarity=1.264 Sum_probs=280.0
Q ss_pred cceEEEEeCccccCCHHHHHHHHHHHHcCCCCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHHH
Q 012808 80 QLTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTV 159 (456)
Q Consensus 80 ~~~~V~KFGGsSv~s~~~~~~va~iI~~~~~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~ 159 (456)
.|++|+|||||||+|++++++|+++|++..++++|||||||||+||.|+++++.+.+.+..+....+.|+.++++|..++
T Consensus 2 ~~~~V~KFGGTSv~~~~~i~~v~~iI~~~~~~~~vVVVSA~ggvTd~Ll~~~~~a~~~~~~~~~~~~~l~~i~~~h~~~~ 81 (304)
T d2cdqa1 2 GITCVMKFGGSSVASAERMKEVADLILTFPEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTV 81 (304)
T ss_dssp CCCEEEEECTGGGSSHHHHHHHHHHHHHCTTCCEEEEECCSTTHHHHHHHHHHHHTTTCTTTGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEeeCccccCCHHHHHHHHHHHHhcCCCCcEEEEeCCCCChHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHHHH
Confidence 47899999999999999999999999987667889999999999999999999988877766777788999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecCCCCc
Q 012808 160 DELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNA 239 (456)
Q Consensus 160 ~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~~a 239 (456)
++|..+.+.+.+.+++|+++++++.++++++++.+|+|+++||+||+.|++++|++.|+++.++|+++++++|+++|+++
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~l~~i~~~~~~s~~~~D~ils~GE~lSa~ll~~~L~~~gi~a~~~d~~~~~iit~~~~~~a 161 (304)
T d2cdqa1 82 KELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNG 161 (304)
T ss_dssp HHHTCCSHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECGGGTTCEECSCSTTC
T ss_pred HHhccchhHHHHHHHHHHHHHhhhccccccchhhHHHHHHhHHHHHHHHHHHHHHHcCCceEEEeecccccccccccccc
Confidence 99999888899999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred ceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccCCCCC
Q 012808 240 DILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTCDPNI 319 (456)
Q Consensus 240 ~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~taDP~~ 319 (456)
++.+.+.....++....+++++.|||++||+|.+.++|+++|||||||||||+++|.+|+|++++||||||||||+|||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~v~vv~Gfig~~~~~G~~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~ 241 (304)
T d2cdqa1 162 DILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTI 241 (304)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTT
T ss_pred cccccchhhhHHHHhhhhhccCcEEEeeccccccCcCCceeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccc
Confidence 98766655554444444567789999999999864589999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCCCCCceEEeeccC
Q 012808 320 HPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLIRRSRD 380 (456)
Q Consensus 320 v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p~~~GT~I~~~~~ 380 (456)
+|+|++|++|||+||+||+++||+||||+|++|+++++|||+|+|+|+|+.+||+|+++.+
T Consensus 242 v~~a~~i~~lsy~EA~ela~~GakvlHp~ti~p~~~~~Ipi~i~nt~~p~~~GT~I~~~~~ 302 (304)
T d2cdqa1 242 YKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRD 302 (304)
T ss_dssp CTTCCBCCEEEHHHHHHHHHHHSSCCCHHHHHHHHHHTCCEEEEETTSTTSCCEEEESCCC
T ss_pred cCCceEcCccCHHHHHHHHhCCCcccCHHHHHHHHHCCCcEEEecCCCCCCCCCEEeCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997654
No 2
>d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.1e-71 Score=552.81 Aligned_cols=287 Identities=35% Similarity=0.504 Sum_probs=252.3
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHcCCCCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVD 160 (456)
Q Consensus 81 ~~~V~KFGGsSv~s~~~~~~va~iI~~~~~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~ 160 (456)
.|+|+|||||||+|++++++|+++|.+. ..+++||||||+|+||.|+++++.+.+ .+..+.++.++++|..+++
T Consensus 1 ~~iV~KFGGTSv~~~~~i~~v~~ii~~~-~~~~vVVVSA~~gvTd~L~~~~~~~~~-----~~~~~~l~~i~~~h~~~~~ 74 (292)
T d2j0wa1 1 EIVVSKFGGTSVADFDAMNRSADIVLSD-ANVRLVVLSASAGITNLLVALAEGLEP-----GERFEKLDAIRNIQFAILE 74 (292)
T ss_dssp CCEEEEECSGGGSSHHHHHHHHHHHTSC-TTEEEEEECCCTTHHHHHHHHTTCCCH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEeeCccccCCHHHHHHHHHHHHhc-CCCeEEEEeCCCCCHHHHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHH
Confidence 3799999999999999999999999874 357899999999999999998765433 2345678999999999999
Q ss_pred HhCCCH---HHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecCCC
Q 012808 161 ELGIDR---SIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFT 237 (456)
Q Consensus 161 ~l~~~~---~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~ 237 (456)
++..+. +.|+.++++|+.+++++.. +++++.+|+|+++||+||+.|++++|+++|+++.++|++++ +++++.++
T Consensus 75 ~l~~~~~~~~~l~~~~~~l~~l~~~~~~--~~s~~~~d~Ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~-i~t~~~~~ 151 (292)
T d2j0wa1 75 RLRYPNVIREEIERLLENITVLAEAAAL--ATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKV-MRTNDRFG 151 (292)
T ss_dssp TSSSTHHHHHHHHHHHHHHHHHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEECCGGGT-CBBCSCTT
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhhc--ccChHHHHHHHhhhHHHhHHHHHHHHHhcCCCccccchhhe-eecCCccc
Confidence 987654 3577888888888887653 78999999999999999999999999999999999999998 88999999
Q ss_pred Ccceeecch-HHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccCC
Q 012808 238 NADILEATY-PAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTCD 316 (456)
Q Consensus 238 ~a~i~~~~~-~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~taD 316 (456)
++.+..... .....++.+. .. ..+||+|||+|.+ ++|+++|||||||||||+++|.+|+|++++||||||||||+|
T Consensus 152 ~a~~~~~~~~~~~~~~~~~~-~~-~~i~Vv~GFig~~-~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taD 228 (292)
T d2j0wa1 152 RAEPDIAALAELAALQLLPR-LN-EGLVITQGFIGSE-NKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTD 228 (292)
T ss_dssp SCCBCHHHHHHHHHHHTHHH-HH-HSEEEEESSEEEC-TTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSC
T ss_pred cccchhhhhhhhhhhhhhhh-hc-ccccccccccccc-cCCceEeeccCcccHHHHHHHHHhhcHHHHHhccCcceeech
Confidence 988754332 2223333322 22 3599999999999 599999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCCCCCceEEeecc
Q 012808 317 PNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLIRRSR 379 (456)
Q Consensus 317 P~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p~~~GT~I~~~~ 379 (456)
|+++|+|++|++|||+||+||+++||+||||+|++|+++++|||+|+|+|+|+.+||+|+++.
T Consensus 229 P~~v~~A~~i~~lsy~EA~ela~~GakVlhp~ti~p~~~~~Ipi~i~nt~~p~~~GT~I~~~~ 291 (292)
T d2j0wa1 229 PRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKT 291 (292)
T ss_dssp TTTCTTCCEESEEEHHHHHHHHHTTCTTSCTTTHHHHHHHTCCEEEEESSCTTSCCEEEESCC
T ss_pred hhcCCCceEcceeCHHHHHHHHhCCccccCHHHHHHHHHcCCcEEEeeCCCCCCCCCeEecCC
Confidence 999999999999999999999999999999999999999999999999999999999998754
No 3
>d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=1.4e-69 Score=539.99 Aligned_cols=291 Identities=41% Similarity=0.691 Sum_probs=262.6
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHcCC--CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHHHH
Q 012808 83 CVMKFGGSSLASAERMREVAELILSFP--NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVD 160 (456)
Q Consensus 83 ~V~KFGGsSv~s~~~~~~va~iI~~~~--~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~ 160 (456)
.|+|||||||+|+++|++|+++|.+.. +.++|||||||||+||.|+++++.+.... ......+.++.++++|..+++
T Consensus 2 tV~KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L~~~~~~a~~~~-~~~~~~~~l~~i~~~h~~~i~ 80 (302)
T d2hmfa1 2 TVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVR-DIAKVGDFIKFIREKHYKAIE 80 (302)
T ss_dssp EEEEECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEeCCCCChhHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999997642 35789999999999999999998876642 123355679999999999999
Q ss_pred HhCCCH-------HHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEee
Q 012808 161 ELGIDR-------SIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITT 233 (456)
Q Consensus 161 ~l~~~~-------~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~ 233 (456)
+|..+. ..|+.++++|+++++++..+++++++.+|+|+++||+||+.||+.+|+++|+++.++|+++++++++
T Consensus 81 ~l~~~~~~~~~~~~~i~~~l~~L~~~l~~~~~~~e~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~i~t~ 160 (302)
T d2hmfa1 81 EAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITD 160 (302)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEECTTTTTEEEC
T ss_pred HHhccHhHHHHHHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHhhhhhhHHhHHHHHHHHHcCCceEEeeccccccccC
Confidence 998664 2488899999999999999999999999999999999999999999999999999999999989999
Q ss_pred cCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccc
Q 012808 234 DDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVL 313 (456)
Q Consensus 234 ~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~ 313 (456)
+.++++.+...... +++.+ ++.++.+||+|||+|.+ ++|+++|||||||||||+++|.+|+|+++++||||+|||
T Consensus 161 ~~~~~a~~~~~~~~---~~l~~-~~~~~~v~Vv~GFig~~-~~G~~ttLgRgGSD~tA~~la~~l~A~~~~i~tdv~gi~ 235 (302)
T d2hmfa1 161 NNFGSARVKRLEVK---ERLLP-LLKEGIIPVVTGFIGTT-EEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVY 235 (302)
T ss_dssp SCTTSCCEEEECHH---HHHHH-HHHTTCEEEEESSEEEC-TTCCEEECCTTTHHHHHHHHHHHHTCSEEEEEESSSSCB
T ss_pred CccchhhhhhhhhH---HHHHH-HHhcCCeEEeecccccC-CCCCEEEEeccCcccHHHHHHHHhccHHHHHHhccchhc
Confidence 99999988654432 22222 24567899999999998 699999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCCCCCceEEeecc
Q 012808 314 TCDPNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLIRRSR 379 (456)
Q Consensus 314 taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p~~~GT~I~~~~ 379 (456)
|+||+++|+|+++++|||+||.||+++|++||||+|+.|++++|||++|+|+++|+.+||+|+++.
T Consensus 236 ~~dP~~~~~a~~~~~~~y~ea~eLa~~g~~v~h~~~~~~~~~~~i~i~v~~~~~~~~~gT~i~~~~ 301 (302)
T d2hmfa1 236 TTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLITNDM 301 (302)
T ss_dssp SSCTTTCTTCCBCSEEEHHHHHHHHHTTCTTSCGGGHHHHHHTTCCEEEEETTSTTSCCEEEESCC
T ss_pred cchhhcCCCceEecccCHHHHHHHHhCCCcccCHHHHHHHHHcCCCEEEeeCCCCCCCCCEEcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998753
No 4
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.96 E-value=5e-30 Score=243.25 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=152.7
Q ss_pred ceEEEEeCccccC----CHHHHHHHHHHHHcCCC-CCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLA----SAERMREVAELILSFPN-ERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLH 155 (456)
Q Consensus 81 ~~~V~KFGGsSv~----s~~~~~~va~iI~~~~~-~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~ 155 (456)
|.+|+|||||++. +.+.++++++.|.+..+ .+.+||+| +|..++.+.+
T Consensus 1 MrIViKiGGs~l~~~~~~~~~i~~l~~~I~~l~~~~~~viV~g-gG~~~~~~~~-------------------------- 53 (225)
T d2brxa1 1 MRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVG-GGKLARKYIE-------------------------- 53 (225)
T ss_dssp CEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHHHSEEEEEEC-CHHHHHHHHH--------------------------
T ss_pred CeEEEEeehhhcCCCCCCHHHHHHHHHHHHHHHcCCcEEEEEC-ccHHHHHHHH--------------------------
Confidence 4689999999995 56789999998876543 34455554 5544443322
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecC
Q 012808 156 HRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDD 235 (456)
Q Consensus 156 ~~~~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~ 235 (456)
.++.++ .++...|++...++++++.+++..|++.|++...-
T Consensus 54 --~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------ 94 (225)
T d2brxa1 54 --VAEKFN-------------------------SSETFKDFIGIQITRANAMLLIAALREKAYPVVVE------------ 94 (225)
T ss_dssp --HHHTTT-------------------------CCHHHHHHHHHHHHHHHHHHHHHHHGGGBCSSCBC------------
T ss_pred --hhhhcc-------------------------hhhHHHHHhhhhHHHHHHHHHHHHHHhhhcccccc------------
Confidence 122222 23455677777889999999999999998864211
Q ss_pred CCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccC
Q 012808 236 FTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTC 315 (456)
Q Consensus 236 ~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~ta 315 (456)
++.+..+ +++.+.|||+++..+ + +.+|++|+++|..|+|++|+||||||||||+
T Consensus 95 ---------~~~~~~~-----~l~~~~ipv~~~~~~-----~-------~~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~ 148 (225)
T d2brxa1 95 ---------DFWEAWK-----AVQLKKIPVMGGTHP-----G-------HTTDAVAALLAEFLKADLLVVITNVDGVYTA 148 (225)
T ss_dssp ---------SHHHHHH-----HHHTTCBCEECCCST-----T-------CCHHHHHHHHHHHTTCSEEEEECSSSSCBSS
T ss_pred ---------cHHHHHH-----HHHhcccccccCCCC-----C-------cchhHHHHHHHHHhCchhhhhhhhhhhhhhc
Confidence 1111111 135678999966321 1 1279999999999999999999999999999
Q ss_pred CCCCCCCCccccccCHHHHHHHHHcCCC------cchHHHHHHHHhCCCCEEEecCCCC---------CCCceEEee
Q 012808 316 DPNIHPHAKPVPYLTFDEAAELAYFGAQ------VLHPQSMRPAREGDIPVRVKNSYNP---------NAPGTLIRR 377 (456)
Q Consensus 316 DP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~------vlhp~a~~~a~~~~Ipv~I~n~~~p---------~~~GT~I~~ 377 (456)
||+++|+|++|++++|+|+.+++..|.. ++++.|++.|+++|||++|.|+++| +..||+|.|
T Consensus 149 dP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~g~gg~~~k~Aa~~a~~~gi~v~I~ng~~~~~l~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 149 DPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTIEP 225 (225)
T ss_dssp CTTTCTTCCBCSEECHHHHHHHHHC--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSSEEECC
T ss_pred ccccccccccceEEecchHHHHhccCccccCCCCcccHHHHHHHHHCCCcEEEEeCCCcchHHHHHCCCCCCcEecC
Confidence 9999999999999999999999988764 6677799999999999999999877 568999964
No 5
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]}
Probab=99.94 E-value=6.2e-26 Score=215.08 Aligned_cols=212 Identities=22% Similarity=0.255 Sum_probs=140.2
Q ss_pred ceEEEEeCccccC-------CHHHHHHHHHHHHcCC--CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHH
Q 012808 81 LTCVMKFGGSSLA-------SAERMREVAELILSFP--NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFV 151 (456)
Q Consensus 81 ~~~V~KFGGsSv~-------s~~~~~~va~iI~~~~--~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i 151 (456)
..+|+||||||+. +.+.++++++.|++.. +...++|+|++++.....+...
T Consensus 6 kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~~~~~l~~~-------------------- 65 (236)
T d2a1fa1 6 KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKA-------------------- 65 (236)
T ss_dssp SEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHT--------------------
T ss_pred cEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecccccchhhhhhhc--------------------
Confidence 4699999999998 6789999999998653 2356677777766665433210
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEE
Q 012808 152 KDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFI 231 (456)
Q Consensus 152 ~~~~~~~~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~ii 231 (456)
+. +....+..........+.+++..+..............
T Consensus 66 -----------~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 105 (236)
T d2a1fa1 66 -----------GM-------------------------NRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQ---- 105 (236)
T ss_dssp -----------TC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSC----
T ss_pred -----------CC-------------------------CchhhHHHHHHHHHHHHHHHHHHHHhhccccchhhhhh----
Confidence 00 11111222233334555556665666655544322211
Q ss_pred eecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCc
Q 012808 232 TTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDG 311 (456)
Q Consensus 232 t~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~G 311 (456)
. ...........+.. ....+.++++.+. ..+.+|++|.+|+++|.+++|+.|+|+|||||
T Consensus 106 ----~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----------~~~~~~dnD~laa~vA~~~~Ad~lii~TDVdG 165 (236)
T d2a1fa1 106 ----L-NGICDTYNWSEAIK-----MLREKRVVIFSAG----------TGNPFFTTDSTACLRGIEIEADVVLKATKVDG 165 (236)
T ss_dssp ----C-TTTSEECCHHHHHH-----HHHTTCEEEEEST----------TSCSSCCHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred ----h-hhhHHHhhhhhhhh-----hhhhccccccccc----------ccCCCCCCcHHHHHHHHHhchhHHHHhhcccc
Confidence 1 11111112222211 1345566666441 23457789999999999999999999999999
Q ss_pred cccCCCCCCCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCCC---------CCceEE
Q 012808 312 VLTCDPNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPN---------APGTLI 375 (456)
Q Consensus 312 V~taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p~---------~~GT~I 375 (456)
|||+||+++|+|+++++++|+|+.+ .|++++|++|++.|+++|||++|.|+++|+ .+||+|
T Consensus 166 vyt~dP~~~~~A~~i~~i~~~e~l~---~G~~v~k~~Aa~~a~~~gi~v~I~ng~~~~~l~~~l~Ge~~GTlI 235 (236)
T d2a1fa1 166 VYDCDPAKNPDAKLYKNLSYAEVID---KELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTI 235 (236)
T ss_dssp CBCC-------CCBCSEECHHHHHH---TTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEE
T ss_pred cccccccccccccccccccHHHHHh---cCCceeHHHHHHHHHHCCCeEEEEeCCCCcHHHHHHcCCCCccee
Confidence 9999999999999999999999866 499999999999999999999999999984 679998
No 6
>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.93 E-value=1.2e-25 Score=211.80 Aligned_cols=203 Identities=20% Similarity=0.255 Sum_probs=147.7
Q ss_pred ceEEEEeCccccCC-HHHHHHHHHHHHcCC-CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLAS-AERMREVAELILSFP-NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRT 158 (456)
Q Consensus 81 ~~~V~KFGGsSv~s-~~~~~~va~iI~~~~-~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 158 (456)
|.+|+|||||++.+ .+.++++++.|++.. +++.+||||+ |.... .|...
T Consensus 1 MrIViKiGgs~l~~~~~~i~~la~~i~~l~~~~~~vIVvsg-G~~ar----------------------------~~~~~ 51 (219)
T d2ij9a1 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGG-GKLAR----------------------------EYIKS 51 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECC-HHHHH----------------------------HHHHH
T ss_pred CEEEEEecccccCCcHHHHHHHHHHHHHHHcCCcEEEEECC-Ccccc----------------------------chhhh
Confidence 56899999999964 788999999998754 3466788886 21111 12233
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecCCCC
Q 012808 159 VDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTN 238 (456)
Q Consensus 159 ~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~~ 238 (456)
+.+++. ++...+++...+..+++.++...|...|.+..
T Consensus 52 ~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------- 89 (219)
T d2ij9a1 52 ARELGA-------------------------SETFCDYIGIAATRLNAMLLISAIPSAAKKVP----------------- 89 (219)
T ss_dssp HHHTTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHCTTBCSSCC-----------------
T ss_pred hhhcCc-------------------------cHHHHHHHHHHHHHhhHHHHHHHhhhccchhh-----------------
Confidence 334433 33445666666777888877776665554320
Q ss_pred cceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccCCCC
Q 012808 239 ADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTCDPN 318 (456)
Q Consensus 239 a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~taDP~ 318 (456)
..+.+..+ +++.+.+||..|+++. +.+|++|+++|..++||.|+++||||||||+||+
T Consensus 90 -----~~~~~~~~-----l~~~~~v~v~~~~~~~------------~stD~laa~vA~~l~Ad~liilTDVDGvYt~dP~ 147 (219)
T d2ij9a1 90 -----VDFMEAEE-----LSKLYRVVVMGGTFPG------------HTTDATAALLAEFIKADVFINATNVDGVYSADPK 147 (219)
T ss_dssp -----SSHHHHHH-----HHTTCSEEEECCCSSS------------SCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCS
T ss_pred -----HHHHHHHH-----HhccCCceEECCCCCC------------CcccHHHHHHHHHcCchHhhhccCcccccccccc
Confidence 11222221 2355679998775432 2379999999999999999999999999999999
Q ss_pred CCCCCccccccCHHHHHHHHHcCC------CcchHHHHHHHHhCCCCEEEecCCC--------CCCCceEEe
Q 012808 319 IHPHAKPVPYLTFDEAAELAYFGA------QVLHPQSMRPAREGDIPVRVKNSYN--------PNAPGTLIR 376 (456)
Q Consensus 319 ~v~~Ak~i~~ls~~Ea~eLa~~Ga------~vlhp~a~~~a~~~~Ipv~I~n~~~--------p~~~GT~I~ 376 (456)
.+|+|++|+++||+|+.+++..|. .++++.+++.|+++|||++|.|+.. .+..||+|+
T Consensus 148 ~~~~A~~i~~is~~e~~~~~~~~~~~~~gg~~~k~~Aa~~a~~~gi~~~I~~g~~~ni~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 148 SDTSAVKYDRLSPQQLVEIVSRSSAKAGTNVVIDLLAAKIIERSKIKTYVILGTPENIMKAVKGEAVGTVIA 219 (219)
T ss_dssp SSSSCCBCSEECHHHHHHHTCC-----CCCCCSCHHHHHHHHHHTCCEEEEECCHHHHHHHHTTCCCSEEEC
T ss_pred cCcccccccccCHHHHHHHhhccCccCCCCCcchHHHHHHHHHcCCcEEEecCCCcHHHHHHCCCCCceEeC
Confidence 999999999999999999875433 3789999999999999999998742 246799984
No 7
>d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]}
Probab=99.91 E-value=3.5e-25 Score=212.58 Aligned_cols=216 Identities=18% Similarity=0.263 Sum_probs=150.1
Q ss_pred eEEEEeCccccCC-----HHHHHHHHHHHHcCCC-CCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHH
Q 012808 82 TCVMKFGGSSLAS-----AERMREVAELILSFPN-ERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLH 155 (456)
Q Consensus 82 ~~V~KFGGsSv~s-----~~~~~~va~iI~~~~~-~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~ 155 (456)
.+|+|||||++.+ .++++++++.|+...+ .+.+||+|+++. .+..
T Consensus 2 rIViKlGGs~it~k~~~~~~~l~~~~~~I~~l~~~~~~vIV~gGa~~-------~G~~---------------------- 52 (250)
T d2akoa1 2 RIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVTSAAIS-------AGHT---------------------- 52 (250)
T ss_dssp EEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHHHSEEEEEECCHHH-------HHHH----------------------
T ss_pred EEEEEeccCeeeCCCCcCHHHHHHHHHHHHHHHcCCeEEEEEcCccc-------cccc----------------------
Confidence 5799999999975 4788889998876432 355666664311 1110
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecC
Q 012808 156 HRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDD 235 (456)
Q Consensus 156 ~~~~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~ 235 (456)
.++... ......+.+.+.||..+..++...|...|+.+... +++...
T Consensus 53 -----~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~------l~~~~~ 99 (250)
T d2akoa1 53 -----KLDIDR----------------------KNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQI------LLTGKD 99 (250)
T ss_dssp -----HCCCCS----------------------SSHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEE------EECTGG
T ss_pred -----cccccc----------------------chhhhhhhhhcccchhHHHHHHHHhhhcccccccc------cccccc
Confidence 111111 11223455677899999999999999999987542 233222
Q ss_pred CCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccC
Q 012808 236 FTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTC 315 (456)
Q Consensus 236 ~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~ta 315 (456)
+.... .+....+.+. .+++.+.+||+.+- ..+....+++|++|++|+++|..++|++|+++||||||||+
T Consensus 100 ~~~~~----~~~~~~~~~~-~~l~~~~ipv~~~~-----~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~ 169 (250)
T d2akoa1 100 FDSRK----ATKHAKNAID-MMINLGILPIINEN-----DATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDK 169 (250)
T ss_dssp GGCHH----HHHHHHHHHH-HHHHTTCEEEEEEC-----TTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSS
T ss_pred hhhhh----hhhhhhHHHH-HHHHhCcccccccC-----ccccccccccccchhhHHHHHHhcccceeeeccCCCceeeC
Confidence 22111 1111222222 24577899998762 23456778899999999999999999999999999999999
Q ss_pred CCCCCCCCccccccCH--HHHHHHHH-----cCCCcchHH--HHHHHHhCCCCEEEecCCCCC
Q 012808 316 DPNIHPHAKPVPYLTF--DEAAELAY-----FGAQVLHPQ--SMRPAREGDIPVRVKNSYNPN 369 (456)
Q Consensus 316 DP~~v~~Ak~i~~ls~--~Ea~eLa~-----~Ga~vlhp~--a~~~a~~~~Ipv~I~n~~~p~ 369 (456)
||+++|+|++|+++|| +|..+++. +|...|.+| +++.++++|||++|.|+++|+
T Consensus 170 dP~~~~~Ak~i~~It~~~~~~~~~~~~~~s~~~tGGM~~Kl~aa~~~~~~gi~v~I~nG~~~~ 232 (250)
T d2akoa1 170 NPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGFDLS 232 (250)
T ss_dssp CTTTCTTCCBCCEESCCCGGGC---------CBSCHHHHHHHHHHHHHHTTCEEEEEESSSCH
T ss_pred CCcccccccchhhccccchHHhhhhcccCCCCCCCchHHHHHHHHHHHHCCCCEEEecCCCcc
Confidence 9999999999999998 45544442 234568875 788999999999999998773
No 8
>d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]}
Probab=99.91 E-value=2.9e-23 Score=195.68 Aligned_cols=214 Identities=20% Similarity=0.232 Sum_probs=144.7
Q ss_pred ceEEEEeCccccC-------CHHHHHHHHHHHHcCC-CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHH
Q 012808 81 LTCVMKFGGSSLA-------SAERMREVAELILSFP-NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVK 152 (456)
Q Consensus 81 ~~~V~KFGGsSv~-------s~~~~~~va~iI~~~~-~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~ 152 (456)
..+|+|||||++. |.+.++++++.|++.. ....|++||.++........
T Consensus 5 krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~----------------------- 61 (236)
T d1ybda1 5 KRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSA----------------------- 61 (236)
T ss_dssp SEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHH-----------------------
T ss_pred CEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeccccccccccc-----------------------
Confidence 4589999999997 5678999999998653 23445555543322110000
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEe
Q 012808 153 DLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFIT 232 (456)
Q Consensus 153 ~~~~~~~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit 232 (456)
... ....................+....+...+...........
T Consensus 62 -------~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 105 (236)
T d1ybda1 62 -------QAG-------------------------SMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSM---- 105 (236)
T ss_dssp -------HHT-------------------------TSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCB----
T ss_pred -------ccc-------------------------ccccchhhHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhhh----
Confidence 000 01122223333344455556666667777777655433211
Q ss_pred ecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCcc
Q 012808 233 TDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGV 312 (456)
Q Consensus 233 ~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV 312 (456)
.... .......+... +..+.++++... ..+++|++|.+|+++|..++|+.++++||||||
T Consensus 106 ----~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~----------~~~~~gdnD~laa~vA~~~~ad~liilTdVdGv 165 (236)
T d1ybda1 106 ----QQIA-ETYARPKAIQY-----LEEGKVVIFAAG----------TGNPFFTTDTAAALRGAEMNCDVMLKATNVDGV 165 (236)
T ss_dssp ----SSSC-EECCHHHHHHH-----HHTTCEEEEEST----------TSSTTCCHHHHHHHHHHHTTCSEEEEECSSSSC
T ss_pred ----hhhh-hhHHHHHHHhh-----hccCceeccccc----------cccccccchHHHHHHHHHhCccceeeccCccch
Confidence 1111 11111112111 234556665331 224678899999999999999999999999999
Q ss_pred ccCCCCCCCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCC---------CCCceEEe
Q 012808 313 LTCDPNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNP---------NAPGTLIR 376 (456)
Q Consensus 313 ~taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p---------~~~GT~I~ 376 (456)
||.||+++|+|+++++++|+|+.+ .|..+|+++|++.|+++|||++|.|+++| +..||+|.
T Consensus 166 y~~dP~~~~~a~~~~~~~~~e~~~---~g~~~m~~~Aa~~a~~~gi~v~I~ng~~~~~i~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 166 YTADPKKDPSATRYETITFDEALL---KNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVH 235 (236)
T ss_dssp BSSCGGGCTTCCBCSEEEHHHHHH---TTCCSSCHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSCSEEEE
T ss_pred hhccccccccceeeccccHHHHHh---cCchHHHHHHHHHHHHCCCcEEEEeCCCccHHHHHHcCCCCCcEeC
Confidence 999999999999999999998754 58999999999999999999999999998 56899984
No 9
>d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.84 E-value=5.9e-20 Score=171.91 Aligned_cols=219 Identities=18% Similarity=0.175 Sum_probs=146.7
Q ss_pred CcceEEEEeCccccC-------CHHHHHHHHHHHHcCCC-CCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHH
Q 012808 79 KQLTCVMKFGGSSLA-------SAERMREVAELILSFPN-ERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSF 150 (456)
Q Consensus 79 ~~~~~V~KFGGsSv~-------s~~~~~~va~iI~~~~~-~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~ 150 (456)
+...+|+|+|||++. +.+.++++++.|++..+ ...|++||..+..--. ....
T Consensus 3 k~krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~-~~~~------------------- 62 (238)
T d1z9da1 3 KYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRG-EPAA------------------- 62 (238)
T ss_dssp SCSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCH-HHHH-------------------
T ss_pred CCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccc-eecc-------------------
Confidence 446789999999996 46789999999987533 3456666654432211 0000
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeE
Q 012808 151 VKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGF 230 (456)
Q Consensus 151 i~~~~~~~~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~i 230 (456)
. ........+.....+...+..+.+..+...|+..........
T Consensus 63 --------~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 105 (238)
T d1z9da1 63 --------D---------------------------AGMDRVQADYTGMLGTVMNALVMADSLQHYGVDTRVQTAIPM-- 105 (238)
T ss_dssp --------H---------------------------HTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESSCB--
T ss_pred --------c---------------------------cCCcchhHHHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhh--
Confidence 0 011233334445556666777778888999998765433221
Q ss_pred EeecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCC
Q 012808 231 ITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVD 310 (456)
Q Consensus 231 it~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~ 310 (456)
..... ...... .+.. .... .+++..+.. .....+..|..++++|..++|+.++++||||
T Consensus 106 ------~~~~~-~~~~~~---~i~~-~~~~-~~~~~~~~~---------~~~~~~~~d~~~~~~a~~~~a~~li~~tdVd 164 (238)
T d1z9da1 106 ------QNVAE-PYIRGR---ALRH-LEKN-RIVVFGAGI---------GSPYFSTDTTAALRAAEIEADAILMAKNGVD 164 (238)
T ss_dssp ------TTTBE-ECCHHH---HHHH-HHTT-CEEEEESTT---------SCTTCCHHHHHHHHHHHTTCSEEEEEESSCC
T ss_pred ------HHHHh-hhhHHH---HHhh-hccc-cccceecce---------eccCCCCchHHHHHHHHHhhhhhhccccccc
Confidence 11110 011111 1111 1122 233332211 1122344788999999999999999999999
Q ss_pred ccccCCCCCCCCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCCC---------CCCceEEeec
Q 012808 311 GVLTCDPNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNP---------NAPGTLIRRS 378 (456)
Q Consensus 311 GV~taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~p---------~~~GT~I~~~ 378 (456)
|+|++||+..|+|++++.++++|..+ .|..+|+++|++.++++|||++|.|+++| +.+||+|+++
T Consensus 165 Gvy~~~P~~~~~a~~~~~~~~~~~~~---~g~~~~k~~Aa~~a~~~gi~v~I~nG~~p~~i~~~l~Ge~~GTlIt~~ 238 (238)
T d1z9da1 165 GVYNADPKKDANAVKFDELTHGEVIK---RGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNK 238 (238)
T ss_dssp SCBSSCTTTCTTCCBCSEEEHHHHHT---TTCCCSCHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCCSEEEECC
T ss_pred ceecccccccccchhhccccccchhc---cCcchhHHHHHHHHHHCCCcEEEEeCCCcchHHHHHCCCCCceEeccC
Confidence 99999999999999999999998654 58899999999999999999999999998 5789999863
No 10
>d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.80 E-value=1.1e-18 Score=171.59 Aligned_cols=235 Identities=18% Similarity=0.294 Sum_probs=164.8
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHcCC--CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLASAERMREVAELILSFP--NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRT 158 (456)
Q Consensus 81 ~~~V~KFGGsSv~s~~~~~~va~iI~~~~--~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 158 (456)
.++|.|+||+.+.+++.+..+++.|.... +.++|+|+++...+...|.+.
T Consensus 27 ktiVIKlGG~~l~~~~~~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~---------------------------- 78 (300)
T d2bufa1 27 KTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRL---------------------------- 78 (300)
T ss_dssp CEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHT----------------------------
T ss_pred CEEEEEEChHHhCChhHHHHHHHHHHHHHHcCCcEEEecChHHHHHHHHHhc----------------------------
Confidence 67999999999999888888888776442 345555554433344433322
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHH-HhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecC--
Q 012808 159 VDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYL-VSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDD-- 235 (456)
Q Consensus 159 ~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i-~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~-- 235 (456)
+++.. +.+|.+. .++...+.+ ..++..++..+.+ .|++.|+++..+.+.+.+++....
T Consensus 79 ----gi~~~-----------~~~g~Rv---T~~~~l~~~~~~~~g~vn~~lv~-~l~~~g~~a~~l~~~d~~~i~~~~~~ 139 (300)
T d2bufa1 79 ----SIESH-----------FIDGMRV---TDAATMDVVEMVLGGQVNKDIVN-LINRHGGSAIGLTGKDAELIRAKKLT 139 (300)
T ss_dssp ----TCCCC-----------BSSSSBC---BCHHHHHHHHHHHHHTHHHHHHH-HHHHTTCCEEEEEETGGGCEEEEECC
T ss_pred ----ccCce-----------ecCCccc---ccchhHHHHHHHHHhHHHHHHHH-HHHhcCCcccccCCCccceEEeeccc
Confidence 11111 1223322 234444444 3444456777654 589999999999887765555421
Q ss_pred ---------------CCCc-ceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcC
Q 012808 236 ---------------FTNA-DILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALG 299 (456)
Q Consensus 236 ---------------~~~a-~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~ 299 (456)
++.. ++...+... ...+++.+.|||+++ +|.+ .+|+..+++ +|..|+.+|.+|+
T Consensus 140 ~~~~~~~~~~~~~id~g~~G~v~~v~~~~-----i~~ll~~g~Ipvis~-~~~~-~~G~~~nin---~D~~Aa~lA~~L~ 209 (300)
T d2bufa1 140 VTRQTPEMTKPEIIDIGHVGEVTGVNVGL-----LNMLVKGDFIPVIAP-IGVG-SNGESYNIN---ADLVAGKVAEALK 209 (300)
T ss_dssp CCCC--------CCCCBSBEEEEEECHHH-----HHHHHHTTCEEEEEE-EEEC-TTSCEEECC---HHHHHHHHHHHHT
T ss_pred ccccCcccccccccccCcccceeecchhH-----HHHHhcCCCeEEecc-cccC-cccchhccc---HHHHHHHHHHHcC
Confidence 2221 232333332 233467899999987 6777 589999998 9999999999999
Q ss_pred CceEEEeecCCccccCCCCCCCCCccccccCHHHHHHHHHcCC--CcchHH--HHHHHHhCCCC-EEEecCCCC------
Q 012808 300 LQEIQVWKDVDGVLTCDPNIHPHAKPVPYLTFDEAAELAYFGA--QVLHPQ--SMRPAREGDIP-VRVKNSYNP------ 368 (456)
Q Consensus 300 A~~l~i~TDV~GV~taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga--~vlhp~--a~~~a~~~~Ip-v~I~n~~~p------ 368 (456)
|++++|+|||+|||+.+ .+++++++.+|+.++...|. ..|-|+ ++..|.++|++ ++|.|+..|
T Consensus 210 AdkLI~Ltdv~Gv~~~~------g~~~~~l~~~~~~~li~~~~i~gGM~~Kl~aa~~a~~~Gv~rv~Ii~g~~~~~ll~e 283 (300)
T d2bufa1 210 AEKLMLLTNIAGLMDKQ------GQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLE 283 (300)
T ss_dssp CSEEEEEESSSCCBCTT------SCBCCEECHHHHHHHHHTTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHH
T ss_pred CCeEEEEcCCCccccCC------CcchhhccHHHHHHHHHcCCcCchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHH
Confidence 99999999999999754 35689999999999998764 568886 67788999997 999998665
Q ss_pred ----CCCceEEeec
Q 012808 369 ----NAPGTLIRRS 378 (456)
Q Consensus 369 ----~~~GT~I~~~ 378 (456)
+..||.|+++
T Consensus 284 Lft~~g~GT~I~~~ 297 (300)
T d2bufa1 284 IFTDSGVGTLISNR 297 (300)
T ss_dssp HSSTTCCSEEEECC
T ss_pred HcCCCCceeEEecC
Confidence 3579999875
No 11
>d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.78 E-value=2.2e-18 Score=168.27 Aligned_cols=237 Identities=20% Similarity=0.239 Sum_probs=161.5
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHcCC-CCCcEEEEcCCCc-CchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLASAERMREVAELILSFP-NERPVIVLSAMGK-TTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRT 158 (456)
Q Consensus 81 ~~~V~KFGGsSv~s~~~~~~va~iI~~~~-~~~~vvVVSA~g~-vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 158 (456)
.++|.|+||+.+.+++.++.+++.|.... .+.++|+||..+. ..+.|.+.+.
T Consensus 26 ktiVIKlGGsvl~~~~~~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~-------------------------- 79 (291)
T d2ap9a1 26 KVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGI-------------------------- 79 (291)
T ss_dssp CEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTC--------------------------
T ss_pred CEEEEEECcHHhcCHHHHHHHHHHHHHHHHCCCEEEEEeCCccccchhHHHcCC--------------------------
Confidence 57899999999999999999998887643 2333444454444 4443333211
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHH-HhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeec---
Q 012808 159 VDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYL-VSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTD--- 234 (456)
Q Consensus 159 ~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i-~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~--- 234 (456)
.+. +.++.+ -.++...+.+ ..+++..+.. +.+.+...|+.+..+...+.++....
T Consensus 80 ------~~~-----------~~~~~r---~t~~~~~~~v~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~a~~~~ 138 (291)
T d2ap9a1 80 ------EGD-----------FKGGFR---VTTPEVLDVARMVLFGQVGRE-LVNLINAHGPYAVGITGEDAQLFTAVRRS 138 (291)
T ss_dssp ------CCC-----------CSSSSC---CBCHHHHHHHHHHHHHTHHHH-HHHHHTTSSSCEEEEETTGGGCEEEEECC
T ss_pred ------Ccc-----------cccccc---cCcHHHHHHHHHhhhhHHHHH-HHHHHHhcCCccccchhhhcccccccccc
Confidence 110 011111 1234444444 3334444444 45668899999988876655444321
Q ss_pred --------CCCC-cceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEE
Q 012808 235 --------DFTN-ADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQV 305 (456)
Q Consensus 235 --------~~~~-a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i 305 (456)
+++. .++...+...+.. +++.+.+||+++ ++.+ .+|+..+++ +|.+|+.+|.+|+|++|+|
T Consensus 139 ~~~~~~~~~~~~~G~v~~v~~~~I~~-----ll~~g~ipvi~~-~~~~-~~g~~~n~d---~D~lAa~lA~~l~AdkLI~ 208 (291)
T d2ap9a1 139 VTVDGVATDIGLVGDVDQVNTAAMLD-----LVAAGRIPVVST-LAPD-ADGVVHNIN---ADTAAAAVAEALGAEKLLM 208 (291)
T ss_dssp BCSSSCCBCCBSEEEEEEECHHHHHH-----HHHTTCEEEEES-EEEC-TTCCEEEEC---HHHHHHHHHHHTTCSEEEE
T ss_pred cccccccccceeecccccchHHHHHH-----HHhcCCCcccCc-cccC-Ccccccccc---HHHHHHHHHHhcCCcEEEE
Confidence 1222 1333334433333 467899999998 4556 478888887 9999999999999999999
Q ss_pred eecCCccccCCCCCCCCCccccccCHHHHHHHHHcCCCcchHH--HHHHHHhCCCC-EEEecCCCC----------CCCc
Q 012808 306 WKDVDGVLTCDPNIHPHAKPVPYLTFDEAAELAYFGAQVLHPQ--SMRPAREGDIP-VRVKNSYNP----------NAPG 372 (456)
Q Consensus 306 ~TDV~GV~taDP~~v~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~--a~~~a~~~~Ip-v~I~n~~~p----------~~~G 372 (456)
+|||||||+.+|+. ...++.++.+|+.++...+...|.|+ ++..|.++|+| ++|.|+..| +..|
T Consensus 209 LTdv~Gv~~~~~~~---~~~~~~~~~~~~~~~~~~~~gGM~~Kl~aA~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~G 285 (291)
T d2ap9a1 209 LTDIDGLYTRWPDR---DSLVSEIDTGTLAQLLPTLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTG 285 (291)
T ss_dssp EESSSSEETTTTCT---TCEESEEEHHHHHHHGGGSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCS
T ss_pred eeccCccccccccc---ccccccCCHHHHHHHHhhhhCchHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCc
Confidence 99999999988864 35678889999999987777788886 67778899998 999998665 3579
Q ss_pred eEEee
Q 012808 373 TLIRR 377 (456)
Q Consensus 373 T~I~~ 377 (456)
|+|.+
T Consensus 286 T~I~r 290 (291)
T d2ap9a1 286 TKVVR 290 (291)
T ss_dssp EEEEC
T ss_pred eEEec
Confidence 99864
No 12
>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]}
Probab=99.77 E-value=3.4e-18 Score=166.39 Aligned_cols=234 Identities=23% Similarity=0.288 Sum_probs=159.3
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHcCC--CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHH
Q 012808 81 LTCVMKFGGSSLASAERMREVAELILSFP--NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRT 158 (456)
Q Consensus 81 ~~~V~KFGGsSv~s~~~~~~va~iI~~~~--~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 158 (456)
..+|+|+||+.+.+++.++++++.|.... +.++|+|+++....+..|.+.+
T Consensus 22 k~iVIKlGgsvi~~~~~~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~--------------------------- 74 (282)
T d2btya1 22 KTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLG--------------------------- 74 (282)
T ss_dssp CEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHT---------------------------
T ss_pred CEEEEEECchHhCChhHHHHHHHHHHHHHHCCCeEEEEECCCccchhhHHHcC---------------------------
Confidence 46899999999999999999998887542 4455555554444444433321
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHh-hhHHHHHHHHHHHHHHcCCceEEecccceeEEeec---
Q 012808 159 VDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVS-FGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTD--- 234 (456)
Q Consensus 159 ~~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s-~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~--- 234 (456)
+++. +..+. .-......+.+.. +...++.. +...|+..|+++..+.+.+.......
T Consensus 75 -----i~~~-----------~~~~~---~~t~~~~~~~~~~~~~~~~n~~-~~~~l~~~g~~a~~l~~~~~~~~~~~~~~ 134 (282)
T d2btya1 75 -----IEPV-----------FKNGH---RVTDEKTMEIVEMVLVGKINKE-IVMNLNLHGGRAVGICGKDSKLIVAEKET 134 (282)
T ss_dssp -----CCCC-----------BSSSS---BCBCHHHHHHHHHHHHHTHHHH-HHHHHHTTTCCEEEEETTGGGSEEEEECC
T ss_pred -----Ccce-----------eccCc---cccchhhHHHHHHHHhchhhHH-HHHHHHhcCCCeeeeeccccceeEecccc
Confidence 1110 00010 1112333333322 22234444 45679999999999987765444432
Q ss_pred ---CCCC-cceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCC
Q 012808 235 ---DFTN-ADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVD 310 (456)
Q Consensus 235 ---~~~~-a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~ 310 (456)
+++. .++...+...+.. +++.+.|||++++ +.+ .+|++.+++ +|.+|+.+|.+|+|++++++|||+
T Consensus 135 ~~~d~~~~g~~~~v~~~~i~~-----lL~~~~ipvi~~~-~~~-~~g~~~nl~---~d~~aa~iA~~l~AdkLI~ltdv~ 204 (282)
T d2btya1 135 KHGDIGYVGKVKKVNPEILHA-----LIENDYIPVIAPV-GIG-EDGHSYNIN---ADTAAAEIAKSLMAEKLILLTDVD 204 (282)
T ss_dssp TTCCCBSBEEEEEECTHHHHH-----HHHTTCEEEEESE-EEC-SSSCEEECC---HHHHHHHHHHHHTCSEEEEEESSS
T ss_pred ccccccccccccccChHHHHH-----HHhCCCceeecCc-ccC-Ccceeeecc---ccchhHHHhhhcCCceeEEecccc
Confidence 2222 2444455544443 3567899999984 555 478888887 999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccccCHHHHHHHHHcC--CCcchHH--HHHHHHhCCCC-EEEecCCCC----------CCCceEE
Q 012808 311 GVLTCDPNIHPHAKPVPYLTFDEAAELAYFG--AQVLHPQ--SMRPAREGDIP-VRVKNSYNP----------NAPGTLI 375 (456)
Q Consensus 311 GV~taDP~~v~~Ak~i~~ls~~Ea~eLa~~G--a~vlhp~--a~~~a~~~~Ip-v~I~n~~~p----------~~~GT~I 375 (456)
|+|+ +.+++++++.+|+.++...+ ...|.|+ ++..|.++|+| ++|.|+..| +..||+|
T Consensus 205 Gl~~-------d~~~i~~~~~~~~~~~~~~~~~tgGM~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~elft~~g~GT~I 277 (282)
T d2btya1 205 GVLK-------DGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277 (282)
T ss_dssp SCEE-------TTEECCEECHHHHHHHHTTTCSCTTHHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEE
T ss_pred ceec-------CccccccCCHHHHHHHHHcCCcCchHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhCCCCceEEE
Confidence 9995 35789999999999987654 2467775 77888999998 999998665 3579999
Q ss_pred eec
Q 012808 376 RRS 378 (456)
Q Consensus 376 ~~~ 378 (456)
++.
T Consensus 278 ~~~ 280 (282)
T d2btya1 278 KEL 280 (282)
T ss_dssp CCC
T ss_pred EeC
Confidence 763
No 13
>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.58 E-value=9.6e-15 Score=143.47 Aligned_cols=114 Identities=14% Similarity=0.104 Sum_probs=84.2
Q ss_pred ccCCceEEEcCCCc-------CCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccCCCCCCCCCccccccC
Q 012808 258 ITDLAIPIVTGFLG-------KAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTCDPNIHPHAKPVPYLT 330 (456)
Q Consensus 258 l~~~~VpVv~Gfig-------~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~taDP~~v~~Ak~i~~ls 330 (456)
.+++.+|++.+... .. .+|+..+.+ +|..|+.+|.+++|++++++|||||||+.+|+ ++++++++++
T Consensus 182 ~~~~~i~vl~~~~~~~v~~~~~~-~~G~~~nin---aD~lAa~vA~~l~Ad~LIlLTdv~Gv~~~~~~--~~~~~i~~l~ 255 (313)
T d1e19a_ 182 VERGVIVIASGGGGVPVILEDGE-IKGVEAVID---KDLAGEKLAEEVNADIFMILTDVNGAALYYGT--EKEQWLREVK 255 (313)
T ss_dssp HHTTCEEECSGGGCEEEEEETTE-EEECCCCCC---HHHHHHHHHHHTTCSEEEEEESSSSCEETTTS--TTCEECCEEE
T ss_pred cccchhhhhccCCCCCccccCCC-cCceEEecc---hhHHHHHHHHHHHHHHHHhccCCcceeccCCC--cccceeeeCC
Confidence 45677777754211 11 135555555 89999999999999999999999999987775 6789999999
Q ss_pred HHHHHHHHHcC---CCcchHH--HHHHHHhCCC-CEEEecCCCC-----CCCceEEee
Q 012808 331 FDEAAELAYFG---AQVLHPQ--SMRPAREGDI-PVRVKNSYNP-----NAPGTLIRR 377 (456)
Q Consensus 331 ~~Ea~eLa~~G---a~vlhp~--a~~~a~~~~I-pv~I~n~~~p-----~~~GT~I~~ 377 (456)
.+|+.++...| ...|-|| ++..|.++++ +++|.+..+. ...||+|.|
T Consensus 256 ~~e~~~li~~g~~~~GGM~~Kv~aA~~a~~~Gv~~v~I~~~~~i~~~l~g~~GT~i~P 313 (313)
T d1e19a_ 256 VEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLEKAVEALEGKTGTQVLP 313 (313)
T ss_dssp HHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEGGGHHHHHTTSSSEEEEC
T ss_pred HHHHHHHhhCCCcccCChHHHHHHHHHHHHhCCCEEEECChHHHHHHHCCCCCCEEcC
Confidence 99999998754 3459997 6656667775 6888653221 125999864
No 14
>d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]}
Probab=99.51 E-value=3.8e-14 Score=138.30 Aligned_cols=95 Identities=16% Similarity=0.195 Sum_probs=77.3
Q ss_pred CCceeeccCCCChhHHHHHHHHcCCceEEEeecCCccccCCCCCCCCCccccccCHHHHHHHHHcC---CCcchHH--HH
Q 012808 276 TCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLTCDPNIHPHAKPVPYLTFDEAAELAYFG---AQVLHPQ--SM 350 (456)
Q Consensus 276 ~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~taDP~~v~~Ak~i~~ls~~Ea~eLa~~G---a~vlhp~--a~ 350 (456)
+|+..+.+ +|..|+.+|.+|+|++++|+|||||||+.+|+ |+.+++++++.+|+.+|...| ...|.|| ++
T Consensus 200 ~g~~~nin---aD~lAa~iA~~l~Ad~Li~lTdv~Gv~~~~~~--~~~~~i~~l~~~e~~~l~~~g~~~~GGM~pKl~aA 274 (307)
T d1b7ba_ 200 KGVEAVID---KDFASEKLAELVDADALVILTGVDYVCINYGK--PDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAA 274 (307)
T ss_dssp EECSCCCC---HHHHHHHHHHHHTCSEEEEECSSSSCEETTTS--TTCEECSEEEHHHHHHHHHTTCSCTTTHHHHHHHH
T ss_pred CCcEEecc---hhHHHHHHHHHhhhhheeeccccCceeeCCCc--ccccccccCCHHHHHHHHHCCCcccCChHHHHHHH
Confidence 56666666 99999999999999999999999999998885 677889999999999998865 3469998 78
Q ss_pred HHHHhCCCC-EEEecC-------CCCCCCceEE
Q 012808 351 RPAREGDIP-VRVKNS-------YNPNAPGTLI 375 (456)
Q Consensus 351 ~~a~~~~Ip-v~I~n~-------~~p~~~GT~I 375 (456)
..|.++|++ ++|.++ +..+..||+|
T Consensus 275 ~~al~~Gv~~~~ii~~~~~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 275 IQFVESQPNKQAIITSLENLGSMSGDEIVGTVV 307 (307)
T ss_dssp HHHHTTSTTCEEEEECHHHHTTCSSCSCEEECC
T ss_pred HHHHHcCCCeEEEECCHHHHHHHHcCCCCCCCC
Confidence 888999995 555543 2234457765
No 15
>d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=1.1e-13 Score=129.66 Aligned_cols=233 Identities=16% Similarity=0.208 Sum_probs=147.6
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHcCC--CCCcEEEEcCCCcCchHHHHhhHHHHhcCCCccchHHHHHHHHHHHHHHH
Q 012808 82 TCVMKFGGSSLASAERMREVAELILSFP--NERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTV 159 (456)
Q Consensus 82 ~~V~KFGGsSv~s~~~~~~va~iI~~~~--~~~~vvVVSA~g~vTd~Ll~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~ 159 (456)
.+|+|||||++.|++.+.++++.|.... +.++|||||++|...+.+++-
T Consensus 4 ~IVIKiGgs~lt~~~~~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~----------------------------- 54 (258)
T d1gs5a_ 4 PLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKG----------------------------- 54 (258)
T ss_dssp CEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHH-----------------------------
T ss_pred CEEEEECchhccCHHHHHHHHHHHHHHHHCCCceEEEECCCchhhhcchhh-----------------------------
Confidence 4899999999999999999999987542 457789999887766655441
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHhhhHHHHHHHHHHHHHHcCCceEEecccceeEEeecC----
Q 012808 160 DELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDD---- 235 (456)
Q Consensus 160 ~~l~~~~~~i~~~~~~L~~ll~gi~~~~e~~~~~~d~i~s~GE~lsa~lla~~L~~~Gi~a~~ld~~~~~iit~~~---- 235 (456)
++..+. +..+.+ .........+...........+...+...|.++...............
T Consensus 55 --~g~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (258)
T d1gs5a_ 55 --LNLPVK-----------KKNGLR---VTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEE 118 (258)
T ss_dssp --HTCCCC-----------EETTEE---CBCHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEECTTGGGCEEEEECCGG
T ss_pred --hccccc-----------cccccc---hhhHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccccccccccc
Confidence 111110 000000 111222222211111122233445688899998887665533332211
Q ss_pred CCC-cceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccCCCChhHHHHHHHHcCCceEEEeecCCcccc
Q 012808 236 FTN-ADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATTIGKALGLQEIQVWKDVDGVLT 314 (456)
Q Consensus 236 ~~~-a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgRGGSD~tAa~lA~~L~A~~l~i~TDV~GV~t 314 (456)
+.. .++.......+.. ++.++.+|++.++ +.+ .++...++. +|..|+.+|..++|+.+ +++|++|++.
T Consensus 119 ~~~~~~~~~~~~~~i~~-----~~~~~~i~v~~~~-~~~-~~~~~~~~~---~~~~a~~~a~~l~a~~~-~~~~~~~~~~ 187 (258)
T d1gs5a_ 119 LGHVGLAQPGSPKLINS-----LLENGYLPVVSSI-GVT-DEGQLMNVN---ADQAATALAATLGADLI-LLSDVSGILD 187 (258)
T ss_dssp GBSBEEEEECCCHHHHH-----HHHTTCEEEECSE-EEC-TTSCEEECC---HHHHHHHHHHHHTCEEE-EEESSSSCBC
T ss_pred ccccccccccccchHHH-----HHhcccccccccc-ccc-cCCcEEEec---hhhhhhhHHHHHHhhhh-hhcccccccc
Confidence 111 2333334443333 2467889999885 444 367777776 89999999999999865 6799999998
Q ss_pred CCCCCCCCCccccccCHHHHHHHHHc--CCCcchHH--HHHHHHhCCCC-EEEecCCCC---------CCCceEEe
Q 012808 315 CDPNIHPHAKPVPYLTFDEAAELAYF--GAQVLHPQ--SMRPAREGDIP-VRVKNSYNP---------NAPGTLIR 376 (456)
Q Consensus 315 aDP~~v~~Ak~i~~ls~~Ea~eLa~~--Ga~vlhp~--a~~~a~~~~Ip-v~I~n~~~p---------~~~GT~I~ 376 (456)
.++. ..+.+...+...+... +...|-|| ++..|.++|++ ++|.|+..| +..||+|.
T Consensus 188 ~~~~------~~~~~~~~~~~~~~~~~~~tGGM~~Kl~aA~~a~~~Gv~~v~I~~g~~~~~L~~l~~g~~~GT~i~ 257 (258)
T d1gs5a_ 188 GKGQ------RIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRIL 257 (258)
T ss_dssp TTSC------BCCEECHHHHHHHHHTTCSCTHHHHHHHHHHHHHHHHTSCEEEEESSCGGGHHHHHTTCCSSEEEC
T ss_pred cccc------cccccchHHHHHHHhCCcccchHHHHHHHHHHHHHcCCCEEEEEeCCCchHHHHHhcCCCCceEEe
Confidence 7654 3556667776666544 44568886 78888999996 999998665 35799884
No 16
>d2cdqa2 d.58.18.10 (A:329-419) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.38 E-value=2.7e-13 Score=109.80 Aligned_cols=64 Identities=89% Similarity=1.222 Sum_probs=60.6
Q ss_pred ceeeEEEEecCeEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEeCCCEEEEEEcCCCcCc
Q 012808 384 AVLTSIVLKRNVTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVATSEVSLSLTLDPSKLWS 447 (456)
Q Consensus 384 ~~i~~I~~~~nvalIsv~g~~m~~~~g~~akif~~L~~~gI~V~~IstSe~sIsi~V~~~d~~~ 447 (456)
..+++|++++|+++|++.|.+|.+.||+++++|+.|+++||||+||++||.+|||+|++++...
T Consensus 2 ~~v~~I~~~~~ia~i~v~g~~m~~~~G~~a~if~~La~~~Inv~~Is~Se~~is~~v~~~~~~~ 65 (91)
T d2cdqa2 2 SILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSKLWS 65 (91)
T ss_dssp CCEEEEEEEEEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEETTEEEEEECCGGGSS
T ss_pred CceEEEEEeCCEEEEEEEeCCCCCCccHHHHHHHHHHHcCCcEEEEEecCCeEEEEEchhHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999887653
No 17
>d2hmfa3 d.58.18.10 (A:304-403) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=99.30 E-value=2.4e-12 Score=105.84 Aligned_cols=71 Identities=21% Similarity=0.418 Sum_probs=64.1
Q ss_pred ccceeeEEEEecCeEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEE--eCCCEEEEEEcCCCcCc-HHHHh
Q 012808 382 SKAVLTSIVLKRNVTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVA--TSEVSLSLTLDPSKLWS-RELIQ 452 (456)
Q Consensus 382 ~~~~i~~I~~~~nvalIsv~g~~m~~~~g~~akif~~L~~~gI~V~~Is--tSe~sIsi~V~~~d~~~-~~l~~ 452 (456)
....|++|++.+|+++|+++|.+|.+.||+++++|++|+++||||+||+ +||.+|+|+|+++|... -+.++
T Consensus 2 ~~~~vk~I~~~~nva~IsivG~~m~~~~Gi~arif~~La~~~InV~mIsQ~~Se~~Isf~V~~~d~~~a~~~L~ 75 (100)
T d2hmfa3 2 SDSIVKAISTIKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETNISLVVSEEDVDKALKALK 75 (100)
T ss_dssp CSSSCCEEEEEEEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCCEEEEECSTTHHHHHHHHH
T ss_pred CCCceeEEEecCCEEEEEEECCCCCCCcchHHHHHHHHHHcCCCHHHeeccCCcceEEEEEeHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999999999999999998 78999999999998765 44444
No 18
>d2j0wa2 d.58.18.10 (A:295-385) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=99.28 E-value=1.1e-12 Score=106.08 Aligned_cols=63 Identities=43% Similarity=0.632 Sum_probs=60.0
Q ss_pred cceeeEEEEecCeEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEeCCCEEEEEEcCCCc
Q 012808 383 KAVLTSIVLKRNVTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVATSEVSLSLTLDPSKL 445 (456)
Q Consensus 383 ~~~i~~I~~~~nvalIsv~g~~m~~~~g~~akif~~L~~~gI~V~~IstSe~sIsi~V~~~d~ 445 (456)
++.+++|+.++|+++|+|+|.+|.+.||+++++|++|+++||||+||++||.+|||+|+.++.
T Consensus 2 ~p~vk~I~~~~~~~~i~v~g~~m~~~~G~~~~if~~L~~~~Inv~mis~Se~~is~~v~~~~~ 64 (91)
T d2j0wa2 2 PPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGS 64 (91)
T ss_dssp CCSEEEEEEEEEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEEETTEEEEEECCCCC
T ss_pred CCcceEEEEeCCEEEEEEEeCCCCCCcCHHHHHHHHHHHcCCcEEEEEccCcEEEEEEchhHH
Confidence 357999999999999999999999999999999999999999999999999999999998764
No 19
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=99.03 E-value=1.4e-10 Score=88.20 Aligned_cols=53 Identities=28% Similarity=0.577 Sum_probs=50.3
Q ss_pred eEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEE--eCCCEEEEEEcCCCcCc
Q 012808 395 VTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVA--TSEVSLSLTLDPSKLWS 447 (456)
Q Consensus 395 valIsv~g~~m~~~~g~~akif~~L~~~gI~V~~Is--tSe~sIsi~V~~~d~~~ 447 (456)
+++|+++|.+|.++||+++|+|++|+++||||.||+ +||.+|+|+|+++|...
T Consensus 1 Va~vsvvG~gm~~~~gi~arif~~L~~~~InV~mIsq~~Se~~Is~~V~~~d~~~ 55 (67)
T d2hmfa2 1 VCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLN 55 (67)
T ss_dssp EEEEEEECTTTTTCTTHHHHHHHHHHHTTCCCCEEEESSCSSEEEEEEEGGGHHH
T ss_pred CEEEEEEeCCCCCCccHHHHHHHHHHHcCCChHHeeecCccceEEEEEeHHHHHH
Confidence 589999999999999999999999999999999998 89999999999998755
No 20
>d2cdqa3 d.58.18.10 (A:420-494) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.72 E-value=2.4e-09 Score=82.97 Aligned_cols=51 Identities=14% Similarity=0.350 Sum_probs=47.6
Q ss_pred EEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEE--eCCCEEEEEEcCCCcCc
Q 012808 396 TMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVA--TSEVSLSLTLDPSKLWS 447 (456)
Q Consensus 396 alIsv~g~~m~~~~g~~akif~~L~~~gI~V~~Is--tSe~sIsi~V~~~d~~~ 447 (456)
++|+++| +|.+.||+++|+|++|+++||||+||+ +||.+|+|+|+++|...
T Consensus 2 a~IsvVG-~~~~~~Giaarif~aL~~~~InV~mIsqg~se~~Is~vV~~~d~~~ 54 (75)
T d2cdqa3 2 AIISLIG-NVQHSSLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEAEAEG 54 (75)
T ss_dssp EEEEEEE-CGGGHHHHHHHHHHHHHHHTCCCSEEEECTTCSEEEEEEEHHHHHH
T ss_pred cEEEEEC-CCCCChhHHHHHHHHHHHcCCceEEEEcCccceEEEEEEeHHHHHH
Confidence 7899999 899999999999999999999999998 78999999999987654
No 21
>d2j0wa3 d.58.18.10 (A:386-449) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=98.68 E-value=4.9e-09 Score=78.67 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=48.8
Q ss_pred eEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEeCCCEEEEEEcCCCcCc
Q 012808 395 VTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVATSEVSLSLTLDPSKLWS 447 (456)
Q Consensus 395 valIsv~g~~m~~~~g~~akif~~L~~~gI~V~~IstSe~sIsi~V~~~d~~~ 447 (456)
+++|+++|.+|.+.||+++|+|++|++.||++.+.++||.+|||+|+++|...
T Consensus 1 la~IsvvG~gm~~~~gi~arif~~L~~~nI~~i~~~~Se~~is~vV~~~d~~~ 53 (64)
T d2j0wa3 1 LALVALIGNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQ 53 (64)
T ss_dssp EEEEEEEESSCTTSSSHHHHHHSSCTTSCCCEEEESSCTTEEEEEEEGGGHHH
T ss_pred CeEEEEECCCcccCccHHHHHHHHHhhCCCeEEEEEcCccEEEEEEcHHHHHH
Confidence 58999999999999999999999999888888777899999999999998754
No 22
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=94.91 E-value=0.027 Score=41.62 Aligned_cols=54 Identities=11% Similarity=0.175 Sum_probs=39.6
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEE---eCCCEEEEEEcCCCcCcHHHHhhh
Q 012808 398 LDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVA---TSEVSLSLTLDPSKLWSRELIQQA 454 (456)
Q Consensus 398 Isv~g~~m~~~~g~~akif~~L~~~gI~V~~Is---tSe~sIsi~V~~~d~~~~~l~~~~ 454 (456)
|+|. +.+.||.++++.+.|+++||||+-++ +.+..|+-.+-++.-...+++++.
T Consensus 6 isV~---~eNkpG~L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~~~ 62 (70)
T d2f06a2 6 LSIF---LENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKDN 62 (70)
T ss_dssp EEEE---ECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHHT
T ss_pred EEEE---EeCCCcHHHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHHHC
Confidence 5555 56899999999999999999999986 556666655544433445566553
No 23
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=92.77 E-value=0.11 Score=38.06 Aligned_cols=50 Identities=20% Similarity=0.303 Sum_probs=35.7
Q ss_pred CCCchhHHHHHHHHHHhCCCcEEEEE---eCCCEEEEEEcCCCcC-cHHHHhhhc
Q 012808 405 MLGQYGFLAKVFSTFEDLGISVDVVA---TSEVSLSLTLDPSKLW-SRELIQQAS 455 (456)
Q Consensus 405 m~~~~g~~akif~~L~~~gI~V~~Is---tSe~sIsi~V~~~d~~-~~~l~~~~~ 455 (456)
+.+.||-++++.+.|+++||||+-+. +.+..+ +.+.-+|.. ..+++++.+
T Consensus 6 v~d~pG~L~~v~~~L~~~~InI~~~y~~~~~~~~~-~vl~vdd~~~a~~~L~~~G 59 (71)
T d2f06a1 6 CPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVAN-VVIRPSNMDKCIEVLKEKK 59 (71)
T ss_dssp EESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEE-EEEEESCHHHHHHHHHHTT
T ss_pred ecCCccHHHHHHHHHHHCCCCEEEEEEEcCCCcEE-EEEEECCHHHHHHHHHHCC
Confidence 67899999999999999999998874 344443 333334443 477776654
No 24
>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=91.71 E-value=0.14 Score=37.13 Aligned_cols=56 Identities=20% Similarity=0.260 Sum_probs=44.7
Q ss_pred EEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEeCCCEEEEEEcCCCcCc-HHHHhh
Q 012808 397 MLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVATSEVSLSLTLDPSKLWS-RELIQQ 453 (456)
Q Consensus 397 lIsv~g~~m~~~~g~~akif~~L~~~gI~V~~IstSe~sIsi~V~~~d~~~-~~l~~~ 453 (456)
.+++.|..-.+..|+++++-+.|+++||++..+++-..+.-| |+.+++.+ -+.+++
T Consensus 4 ~l~v~g~l~l~~vGi~a~i~~~La~a~Is~~~vSty~~D~il-Vp~~~~~~A~~~L~~ 60 (66)
T d1zhva2 4 CFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTFDGDHLL-VRSNDLEKTADLLAN 60 (66)
T ss_dssp EEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECSSCEEEE-EEGGGHHHHHHHHHH
T ss_pred EEEEccCCCchhHhHHHHHHHHHHHCCCCeEEEEeeeccEEE-EEHHHHHHHHHHHHH
Confidence 467777766788999999999999999999999988877755 77776654 555554
No 25
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=91.36 E-value=0.17 Score=38.02 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=37.8
Q ss_pred CCCchhHHHHHHHHHHhCCCcEEEEEe--CC----CEEEEEEcCCCcCcHHHHhh
Q 012808 405 MLGQYGFLAKVFSTFEDLGISVDVVAT--SE----VSLSLTLDPSKLWSRELIQQ 453 (456)
Q Consensus 405 m~~~~g~~akif~~L~~~gI~V~~Ist--Se----~sIsi~V~~~d~~~~~l~~~ 453 (456)
..+.||+++|+...|++.|+||+-++. +| ..++++++.++-.-.++.+|
T Consensus 10 v~n~pGvL~Ri~~lF~rRg~NI~SL~v~~te~~~iSR~tivv~g~~~~i~qi~kQ 64 (78)
T d2fgca2 10 VHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQ 64 (78)
T ss_dssp EECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHhhCCcceEEEEEeecCCCCeEEEEEEEEcCHHHHHHHHHH
Confidence 347999999999999999999999873 22 66888888766444555554
No 26
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=88.87 E-value=0.63 Score=34.51 Aligned_cols=33 Identities=21% Similarity=0.521 Sum_probs=28.9
Q ss_pred EEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEe
Q 012808 396 TMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVAT 431 (456)
Q Consensus 396 alIsv~g~~m~~~~g~~akif~~L~~~gI~V~~Ist 431 (456)
++|++.|. +.||+++++.+.|+++|+||.-+++
T Consensus 3 ~vitv~g~---DrpGiVa~vt~~l~~~g~NI~d~~q 35 (83)
T d1zpva1 3 AIITVVGK---DKSGIVAGVSGKIAELGLNIDDISQ 35 (83)
T ss_dssp EEEEEEES---CCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEEcC---CCCCHHHHHHHHHHHCCCeEEEEEe
Confidence 46899985 5999999999999999999988763
No 27
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=88.25 E-value=0.2 Score=37.34 Aligned_cols=48 Identities=13% Similarity=0.266 Sum_probs=36.3
Q ss_pred CCchhHHHHHHHHHHhCCCcEEEEEeC--C----CEEEEEEcCCCcCcHHHHhh
Q 012808 406 LGQYGFLAKVFSTFEDLGISVDVVATS--E----VSLSLTLDPSKLWSRELIQQ 453 (456)
Q Consensus 406 ~~~~g~~akif~~L~~~gI~V~~IstS--e----~sIsi~V~~~d~~~~~l~~~ 453 (456)
.+.||+++++...|++.|+||+-++.+ | ..+++++..++-.=.++.+|
T Consensus 9 ~N~~GVL~RisglF~rRg~NI~Sl~v~~te~~~iSR~tivv~~~~~~i~qi~kQ 62 (76)
T d2f1fa1 9 ENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQ 62 (76)
T ss_dssp ECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHhcCcceEEEEEcccCCCCeeEEEEEEECCHHHHHHHHHH
Confidence 479999999999999999999998733 2 56888887665433444443
No 28
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=87.56 E-value=0.19 Score=37.56 Aligned_cols=49 Identities=18% Similarity=0.327 Sum_probs=37.0
Q ss_pred CCCchhHHHHHHHHHHhCCCcEEEEEeC--C----CEEEEEEcCCCcCcHHHHhh
Q 012808 405 MLGQYGFLAKVFSTFEDLGISVDVVATS--E----VSLSLTLDPSKLWSRELIQQ 453 (456)
Q Consensus 405 m~~~~g~~akif~~L~~~gI~V~~IstS--e----~sIsi~V~~~d~~~~~l~~~ 453 (456)
..+.||+++|+...|++.|+||+-++.+ | ..++++++.++-.-.++++|
T Consensus 9 veN~pGvL~Ris~lF~rRg~NI~Sltv~~te~~~iSRmtivv~~~~~~i~qi~kQ 63 (77)
T d2pc6a2 9 MENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQ 63 (77)
T ss_dssp EECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHH
T ss_pred EECCccHHHHHHHHHhccCcceEEEEEeccCCCCeEEEEEEEECCHHHHHHHHHH
Confidence 3479999999999999999999998733 2 56888887665333445444
No 29
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=86.99 E-value=0.59 Score=34.53 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=31.8
Q ss_pred CCchhHHHHHHHHHHhCCCcEEEEE---eC--CCEEEEEEcCCCcCcHHHHhh
Q 012808 406 LGQYGFLAKVFSTFEDLGISVDVVA---TS--EVSLSLTLDPSKLWSRELIQQ 453 (456)
Q Consensus 406 ~~~~g~~akif~~L~~~gI~V~~Is---tS--e~sIsi~V~~~d~~~~~l~~~ 453 (456)
.+.||+++++-++|+++||||..+. .+ ...+ ++++-+.-...+++++
T Consensus 11 ~D~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g~~a~-~vi~vD~~~~~~vl~~ 62 (78)
T d1ygya3 11 VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGAT-ILLRLDQDVPDDVRTA 62 (78)
T ss_dssp SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEE-EEEEESSCCCHHHHHH
T ss_pred CCcCCHHHHHHHHHHhcCcChhhheeeecCCCCeEE-EEEEcCCCccHHHHHH
Confidence 4789999999999999999999864 22 2223 2333344455555553
No 30
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=81.84 E-value=0.73 Score=34.43 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=22.8
Q ss_pred CCchhHHHHHHHHHHhCCCcEEEEE
Q 012808 406 LGQYGFLAKVFSTFEDLGISVDVVA 430 (456)
Q Consensus 406 ~~~~g~~akif~~L~~~gI~V~~Is 430 (456)
.+.||++++|.+.|+++||||.-+.
T Consensus 19 ~d~PGvla~I~~~l~~~~iNI~~~~ 43 (84)
T d1sc6a3 19 ENRPGVLTALNKIFAEQGVNIAAQY 43 (84)
T ss_dssp ESCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcCCHHHHHHHHHHHcCCCHHHhc
Confidence 4789999999999999999998774
No 31
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=81.45 E-value=1.1 Score=32.90 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=31.3
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEe-------CCCEEEEEEcCCCc
Q 012808 398 LDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVAT-------SEVSLSLTLDPSKL 445 (456)
Q Consensus 398 Isv~g~~m~~~~g~~akif~~L~~~gI~V~~Ist-------Se~sIsi~V~~~d~ 445 (456)
|.+. ..+.||+++.+..+++++++||..+.+ .+..+++.++..+.
T Consensus 4 i~i~---~~Dr~GlL~di~~~ia~~~~NI~~i~~~~~~~g~~~~~~~i~v~~~~~ 55 (77)
T d1y7pa2 4 LRII---AENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG 55 (77)
T ss_dssp EEEE---EECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS
T ss_pred EEEE---EecCCChHHHHHHHHHHcCCCeEEEEeeccCCCeEEEEEEEEEEcCcc
Confidence 4455 346899999999999999999999862 36788888865543
No 32
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=80.90 E-value=1.1 Score=33.47 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=33.5
Q ss_pred eEEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEe----CCCEEEEEEc
Q 012808 395 VTMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVAT----SEVSLSLTLD 441 (456)
Q Consensus 395 valIsv~g~~m~~~~g~~akif~~L~~~gI~V~~Ist----Se~sIsi~V~ 441 (456)
..+|++.|. +.||+++++...|+++|+||.-+.+ ......+.|+
T Consensus 5 ~~vitv~G~---DrpGiva~vt~~l~~~g~NI~d~~~~~~~~~~~~~~~v~ 52 (86)
T d1u8sa1 5 HLVITAVGT---DRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLIS 52 (86)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEeC---CCChHHHHHHHHHHHCCCeEEEeEeEEECCeeEEEEEEE
Confidence 457899985 5899999999999999999987752 2344444444
No 33
>d1zvpa2 d.58.18.9 (A:68-131) Hypothetical protein VC0802 {Vibrio cholerae [TaxId: 666]}
Probab=80.37 E-value=2.5 Score=30.02 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=36.8
Q ss_pred EEEEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEEeCCCEEEEEEcCCCcC
Q 012808 396 TMLDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVATSEVSLSLTLDPSKLW 446 (456)
Q Consensus 396 alIsv~g~~m~~~~g~~akif~~L~~~gI~V~~IstSe~sIsi~V~~~d~~ 446 (456)
.+|++.-..-+...|+++++-+.|+++||++..+++-..+-- .|+.++..
T Consensus 4 r~ItL~vhssLe~VGl~A~is~~La~~~Is~nvis~~~hDhi-fVp~~~~~ 53 (64)
T d1zvpa2 4 SLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGYYHDHI-FVQKEKAQ 53 (64)
T ss_dssp EEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECSSCEEE-EEEGGGHH
T ss_pred EEEEEecCCchHHHhHHHHHHHHHHHCCCCeEEEEeeccceE-EEchhhHH
Confidence 356666556678999999999999999999999997766543 45555543
No 34
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=70.57 E-value=2.9 Score=31.38 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=25.7
Q ss_pred EEEEeCCCCCchhHHHHHHHHHHhCCCcEEEEE
Q 012808 398 LDIVSTRMLGQYGFLAKVFSTFEDLGISVDVVA 430 (456)
Q Consensus 398 Isv~g~~m~~~~g~~akif~~L~~~gI~V~~Is 430 (456)
|.|.|. +.||+++++-..|+++|+||.-++
T Consensus 9 v~v~g~---DrpGIV~~it~~la~~~~nI~~l~ 38 (93)
T d1u8sa2 9 VYVESD---DKLGLTEKFTQFFAQRQIGMASLS 38 (93)
T ss_dssp EEEEES---CCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEC---CCCCHHHHHHHHHHHcCCCchhhh
Confidence 456664 589999999999999999998775
No 35
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=57.30 E-value=12 Score=30.42 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCceEEecccceeEEeecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccC
Q 012808 205 STRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGR 284 (456)
Q Consensus 205 sa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgR 284 (456)
|+.++++.|++.|++.... +++.+ +.+.+.+.+.+. +++..+.|++|-.+.+
T Consensus 28 N~~~l~~~l~~~G~~v~~~-----~~v~D-----------d~~~i~~~l~~~-~~~~DliittGG~s~g----------- 79 (155)
T d2ftsa3 28 NRSTLLATIQEHGYPTINL-----GIVGD-----------NPDDLLNALNEG-ISRADVIITSGGVSMG----------- 79 (155)
T ss_dssp HHHHHHHHHHTTTCCEEEE-----EEECS-----------SHHHHHHHHHHH-HHHCSEEEEESCCSSS-----------
T ss_pred hHHHHHHHhcccccceEEE-----EEecC-----------chhHHHHHHHHh-hcccCEEEEeccccCC-----------
Confidence 6677888999999987542 23322 234455555543 3455788888844432
Q ss_pred CCChhHHHHHHHHcCCceEEEe
Q 012808 285 GGSDLTATTIGKALGLQEIQVW 306 (456)
Q Consensus 285 GGSD~tAa~lA~~L~A~~l~i~ 306 (456)
.-|++...++..++.+ +.+|
T Consensus 80 -~~D~~~~~l~~~~~~~-~~f~ 99 (155)
T d2ftsa3 80 -EKDYLKQVLDIDLHAQ-IHFG 99 (155)
T ss_dssp -CCHHHHHHHHTTTCCE-EEES
T ss_pred -cchhhHHHHHhhccee-eeec
Confidence 2699999998777764 4444
No 36
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=55.40 E-value=10 Score=27.51 Aligned_cols=38 Identities=21% Similarity=0.306 Sum_probs=28.8
Q ss_pred CCCchhHHHHHHHHHHhCCCcEEEEEe-----CCCEEEEEEcC
Q 012808 405 MLGQYGFLAKVFSTFEDLGISVDVVAT-----SEVSLSLTLDP 442 (456)
Q Consensus 405 m~~~~g~~akif~~L~~~gI~V~~Ist-----Se~sIsi~V~~ 442 (456)
..+.||.++++++.|+++|||.-.|-+ ..-...|.|+=
T Consensus 9 ~~d~pGaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~ 51 (80)
T d2qmwa2 9 MHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 51 (80)
T ss_dssp SSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEE
Confidence 357899999999999999999988842 22345555553
No 37
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=49.60 E-value=29 Score=27.86 Aligned_cols=70 Identities=23% Similarity=0.359 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCceEEecccceeEEeecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccC
Q 012808 205 STRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGR 284 (456)
Q Consensus 205 sa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgR 284 (456)
|+.++++.|++.|+++..+ +++.+ +.+.+.+.+.+. +++..+.|++|-.+ .
T Consensus 28 N~~~l~~~l~~~G~~v~~~-----~~v~D-----------d~~~i~~~l~~~-~~~~DivittGG~s------------~ 78 (149)
T d2nqra3 28 NRLAVHLMLEQLGCEVINL-----GIIRD-----------DPHALRAAFIEA-DSQADVVISSGGVS------------V 78 (149)
T ss_dssp HHHHHHHHHHHTTCEEEEE-----EEECS-----------SHHHHHHHHHHH-HHHCSEEEECSSSC------------S
T ss_pred chHHHHhhhhhcceEEEEc-----cccCC-----------hHHHHHHHHHhc-ccccCEEEEcCCcc------------C
Confidence 6777888899999987653 23322 234455555443 34457888888332 3
Q ss_pred CCChhHHHHHHHHcCCceEEEe
Q 012808 285 GGSDLTATTIGKALGLQEIQVW 306 (456)
Q Consensus 285 GGSD~tAa~lA~~L~A~~l~i~ 306 (456)
|..|++...+.. ++ ++.+|
T Consensus 79 g~~D~~~~~l~~-~G--~i~~~ 97 (149)
T d2nqra3 79 GEADYTKTILEE-LG--EIAFW 97 (149)
T ss_dssp SSCSHHHHHHHH-HS--EEEEE
T ss_pred CchHHHHHHHHH-cC--Ceeee
Confidence 347999999976 45 56555
No 38
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=42.37 E-value=38 Score=26.96 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCCceEEecccceeEEeecCCCCcceeecchHHHHHHHhhccccCCceEEEcCCCcCCCCCCceeeccC
Q 012808 205 STRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGR 284 (456)
Q Consensus 205 sa~lla~~L~~~Gi~a~~ld~~~~~iit~~~~~~a~i~~~~~~~i~~~l~~~ll~~~~VpVv~Gfig~~~~~G~vttlgR 284 (456)
|+.++++.|++.|+..... +++.+ +.+.+.+.+.. ++++..+.|++|-.+.+
T Consensus 28 n~~~l~~~l~~~G~~v~~~-----~~v~D-----------d~~~i~~~i~~-~~~~~DliIttGG~s~g----------- 79 (148)
T d1uz5a3 28 NGRALCDAINELGGEGIFM-----GVARD-----------DKESLKALIEK-AVNVGDVVVISGGASGG----------- 79 (148)
T ss_dssp HHHHHHHHHHHHTSEEEEE-----EEECS-----------SHHHHHHHHHH-HHHHCSEEEEECCC--------------
T ss_pred ChHHHHHhhhcccccceee-----eeecc-----------HHHHHHHHHHh-hhccccEEEECCCcccc-----------
Confidence 6777888999999986542 23322 23445554443 24456788888833322
Q ss_pred CCChhHHHHHHHHcCCceEEEe
Q 012808 285 GGSDLTATTIGKALGLQEIQVW 306 (456)
Q Consensus 285 GGSD~tAa~lA~~L~A~~l~i~ 306 (456)
..|++...+... + ++.+|
T Consensus 80 -~~D~~~~~l~~~-g--~~~~~ 97 (148)
T d1uz5a3 80 -TKDLTASVIEEL-G--EVKVH 97 (148)
T ss_dssp ---CHHHHHHHHH-S--EEEEE
T ss_pred -hhhHHHHHHHHc-C--chhhh
Confidence 269999988876 5 56665
No 39
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.97 E-value=23 Score=26.55 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=30.1
Q ss_pred CCchhHHHHHHHHHHhCCCcEEEEE-----eCCCEEEEEEcCC
Q 012808 406 LGQYGFLAKVFSTFEDLGISVDVVA-----TSEVSLSLTLDPS 443 (456)
Q Consensus 406 ~~~~g~~akif~~L~~~gI~V~~Is-----tSe~sIsi~V~~~ 443 (456)
.+.||.+++++..|+++|||.--|. ...-...|.|+-+
T Consensus 24 ~~~pGaL~~vL~~f~~~~INLt~IeSRP~~~~~~~Y~F~id~e 66 (97)
T d1phza1 24 KEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD 66 (97)
T ss_dssp ECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEeeccCCCCceEEEEEEcc
Confidence 4689999999999999999977773 2355677888653
No 40
>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}
Probab=25.86 E-value=19 Score=29.91 Aligned_cols=50 Identities=30% Similarity=0.431 Sum_probs=29.8
Q ss_pred EEeecCCccccCCCCCC--CCCccccccCHHHHHHHHHcCCCcchHHHHHHHHhCCCCEEEecCCC
Q 012808 304 QVWKDVDGVLTCDPNIH--PHAKPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYN 367 (456)
Q Consensus 304 ~i~TDV~GV~taDP~~v--~~Ak~i~~ls~~Ea~eLa~~Ga~vlhp~a~~~a~~~~Ipv~I~n~~~ 367 (456)
.+..|||||+| |.++. ++.+.+... .+-+.-++..+++.++++.+.++.+
T Consensus 7 ~~i~DvDGVlT-DG~v~~~~dG~e~k~F-------------~~~Dg~gi~~l~~~gi~~~iis~~~ 58 (177)
T d1k1ea_ 7 FVITDVDGVLT-DGQLHYDANGEAIKSF-------------HVRDGLGIKMLMDADIQVAVLSGRD 58 (177)
T ss_dssp EEEEECTTTTS-CSEEEEETTEEEEEEE-------------EHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred EEEEccCCccc-CCeEEEeCCCCEEEEE-------------ECcchHHHHHHhhhcEEEEEecCCc
Confidence 46789999998 43331 122222211 1233457888888899888876543
No 41
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}
Probab=24.86 E-value=73 Score=27.57 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=29.5
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHcCCCCCcEEEEcCCCcCc
Q 012808 81 LTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTT 124 (456)
Q Consensus 81 ~~~V~KFGGsSv~s~~~~~~va~iI~~~~~~~~vvVVSA~g~vT 124 (456)
...+.|.| -++|.+.++.+++.++.++ ..++||..-+...+
T Consensus 72 ~~~aIkiG--~l~s~~~i~~v~~~l~~~~-~~~~vvdpv~~~~~ 112 (266)
T d1jxha_ 72 RIDTTKIG--MLAETDIVEAVAERLQRHH-VRNVVLDTVMLAKS 112 (266)
T ss_dssp CCSEEEEC--CCCSHHHHHHHHHHHHHTT-CCSEEEECCCC---
T ss_pred cCceEEEc--ccchHHHHHHHHHHHHhcc-CCceEEeccccccc
Confidence 45688999 7889999999999998865 34566666555444
Done!