BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012813
(456 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/467 (64%), Positives = 377/467 (80%), Gaps = 18/467 (3%)
Query: 1 MAKTGIFDSDPTVMPKATELKKELQKLVRLIVDDVDYRTETIDQARDTLCALKELKTKK- 59
MAKTG+FDSDPT + KA ELK+E++KL+ I D+ D +TIDQ +D L AL+E +K
Sbjct: 1 MAKTGVFDSDPTAIAKAKELKREMKKLLIKIDDEDDLGVQTIDQLQDALSALREATMRKM 60
Query: 60 -RSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQ 118
+S SL++ ETVSCPEEF+CPLS ELMRDPV+LASGQT+D+ +IQ+WL +GNRTCP+TQQ
Sbjct: 61 AKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQ 120
Query: 119 VLSHTILTPNHLIREMISQWCRSQGIELPNSVQY----INE-EGITEADRDHFLSLLKKM 173
VL HT LTPN LIREMIS+WC+ G+E + QY +NE E +T +DR+ F SLL K+
Sbjct: 121 VLPHTALTPNLLIREMISKWCKKNGLETKS--QYHPNLVNEDETVTRSDREIFNSLLCKV 178
Query: 174 SAT-LPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPN--LQE 230
S++ L DQ AAKELRLLT++ FRALFGES D I +L++PL +G NP+ LQE
Sbjct: 179 SSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLL-----HGSNPDEKLQE 233
Query: 231 DVITTLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKE 289
DV+TTLLN+SIHD+ NKKLV E P VIPLL+DALR GT+ TRSNAAAA+FTLSALDSNK
Sbjct: 234 DVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKV 293
Query: 290 VIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGV 349
+IGKSG LKPLIDLL+EG+ A+KDVA+AIF LCI HEN++RAVRDG V V+ KKI +G+
Sbjct: 294 LIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGL 353
Query: 350 HVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRT 409
+VDELLAILAML T+ +AVEE+G+LGGVS +L+I RES C RNKEN I ILHTIC SDRT
Sbjct: 354 YVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRT 413
Query: 410 KWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTVNLTHTA 456
KWK ++EEE+ HGTI+KL+++GT+RA+RKA GIL+RL++ +NLTHTA
Sbjct: 414 KWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRKAMNLTHTA 460
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 284/452 (62%), Gaps = 28/452 (6%)
Query: 17 ATELKKELQKLVRLIVDDV--DYRTET---------IDQARDTLCALKELKTKKRSLSLK 65
A L++ELQK++ I++D + R ET ID+A L L+++++K +
Sbjct: 9 ADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKIPESDIS 68
Query: 66 LHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTIL 125
V P+EF C LS +M +PVI+ASGQT+++ YI WLK RTCP+T+QVLSH +
Sbjct: 69 ---PVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLW 124
Query: 126 TPNHLIREMISQWCRSQGIELPNSV--QYINEEGITEADRDHFLSLLKKMSAT--LPDQT 181
PNHLI ++I+QWC L N Q ++E + E +LL+++S++ + DQ
Sbjct: 125 IPNHLISDLITQWC------LVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQI 178
Query: 182 EAAKELRLLTKRMPSFRALFGES-HDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLS 240
EAAKELR TK+ P+ R F HD+I +LLSPLS + LQE+++T L NLS
Sbjct: 179 EAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLS 238
Query: 241 IHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPL 300
I ++NK ++AE +VIPLL +L+ GT ETR NAAA L +LSA+DSNK +IG S A+K L
Sbjct: 239 ILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKAL 298
Query: 301 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAM 360
IDL++EG A K+ S +FNLCI ENK + V G + KKI G +VDELL++LA+
Sbjct: 299 IDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLAL 358
Query: 361 LSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC--LSDRTKWKAMREEE 418
+ST++RAVEE+ LG + + I+R+ + EN + I+ + DR++ K + EEE
Sbjct: 359 ISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEE 418
Query: 419 STHGTISKLAQDGTARAKRKATGILERLKRTV 450
+ HGT +KLA+ G+ RA RKA GIL+ +KR V
Sbjct: 419 NQHGTFTKLAKQGSVRAARKAQGILQWIKRFV 450
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 255/410 (62%), Gaps = 25/410 (6%)
Query: 41 TIDQARDTLCALKELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRP 100
T D A D L RS S+K H + P+EF+CP+S ELM+DPVI++SGQT++R
Sbjct: 206 TEDHANDALTT--------RSASIK-HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERS 256
Query: 101 YIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQWCRSQGIELPNSVQYI-NEEGIT 159
IQ+WL +G++TCP+TQQ LSHT LTPN +++ +ISQWC + GIELP + Q +++
Sbjct: 257 CIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAK 316
Query: 160 EADRDH--FLSLLKKM-SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLS 216
+D DH +SL+ ++ S +Q AA E+RLL KR + R E+ AIP L++ LS
Sbjct: 317 SSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEA-GAIPLLVNLLS 375
Query: 217 ESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAA 276
S +P QE +T LLNLSIH+NNK + ++ IP +++ L++G++ETR NAAA
Sbjct: 376 SS------DPRTQEHAVTALLNLSIHENNKASIVDS-HAIPKIVEVLKTGSMETRENAAA 428
Query: 277 ALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDG 336
LF+LS +D NK IG +GA+ PLI+LL +G KD A+AIFNLCI NK RAV+ G
Sbjct: 429 TLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAG 488
Query: 337 GVSVILKKIMD--GVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKE 394
V ++ ++D G +DE L++L++L+ N I + ++ +I+ + RN+E
Sbjct: 489 IVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGS-PRNRE 547
Query: 395 NCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILE 444
N AIL +C +D T+ + + +L++ GT RAKRKA+ ILE
Sbjct: 548 NAAAILWLLCSAD-TEQTLAAKAAGVEDALKELSETGTDRAKRKASSILE 596
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 231 DVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEV 290
D +LL++ + K+V IP L++ +++G+ R NAAA L+ L + D+ + +
Sbjct: 506 DEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTL 565
Query: 291 IGKSGALKPLIDLLDEGHQSAMKDVASAIFNL 322
K+ ++ + L E K AS+I L
Sbjct: 566 AAKAAGVEDALKELSETGTDRAKRKASSILEL 597
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 241/397 (60%), Gaps = 18/397 (4%)
Query: 67 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILT 126
H + PE F+CP+S ELM+DPVI+++GQT++R IQ+WL AG++TCP++Q+ L H LT
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLT 302
Query: 127 PNHLIREMISQWCRSQGIELPNS-----VQYINEEGITEADRDHFLSLLKKMS-ATLPDQ 180
PN++++ +I+ WC S GIELP + I ++ DR LSLL+K++ T Q
Sbjct: 303 PNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362
Query: 181 TEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLS 240
AA ELRLL KR R E+ AIP L+ LS +P QE +T LLNLS
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEA-GAIPLLVELLSSP------DPRTQEHSVTALLNLS 415
Query: 241 IHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPL 300
I++ NK + + + +++ L++G++E R NAAA LF+LS +D NK IG +GA++ L
Sbjct: 416 INEGNKGAIVDAGAITD-IVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQAL 474
Query: 301 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAIL 358
I LL+EG + KD A+AIFNLCI NK+RAV+ G V + + + D G VDE LAIL
Sbjct: 475 ISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAIL 534
Query: 359 AMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE 418
A+LSTN I + + ++ IIR + RN+EN AIL +C+ + + R E
Sbjct: 535 AILSTNQEGKTAIAEAESIPVLVEIIRTGS-PRNRENAAAILWYLCIGNIERLNVAR-EV 592
Query: 419 STHGTISKLAQDGTARAKRKATGILERLKRTVNLTHT 455
+ +L ++GT RAKRKA +LE +++T + T
Sbjct: 593 GADVALKELTENGTDRAKRKAASLLELIQQTEGVAVT 629
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/388 (40%), Positives = 231/388 (59%), Gaps = 16/388 (4%)
Query: 65 KLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTI 124
K + ++ P +F CP+S ELM+DPVI+A+GQT++R YIQRW+ GN TCP+TQQ L +
Sbjct: 234 KKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFT 293
Query: 125 LTPNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA-TLPDQTEA 183
LTPN+++R +IS+WC IE P YIN D +L++++S+ + D+ A
Sbjct: 294 LTPNYVLRSLISRWCAEHNIEQP--AGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNA 351
Query: 184 AKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHD 243
E+R L+KR R L E+ AIP L++ L+ QE+ IT +LNLSI++
Sbjct: 352 VSEIRSLSKRSTDNRILIAEAG-AIPVLVNLLTSEDVAT------QENAITCVLNLSIYE 404
Query: 244 NNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDL 303
NNK+L+ V ++ LR+GT+E R NAAA LF+LS D NK +IG SGA+ L+DL
Sbjct: 405 NNKELIMFAGAVTSIVQ-VLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDL 463
Query: 304 LDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH---VDELLAILAM 360
L+ G KD A+A+FNLCI H NK RAVR G V+ ++K + D VDE L IL++
Sbjct: 464 LENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSV 523
Query: 361 LSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEEST 420
L+ N A I + ++ I++ RN+EN AIL ++C D K + +
Sbjct: 524 LANNQDAKSAIVKANTLPALIGILQTDQT-RNRENAAAILLSLCKRDTEKLITIGRLGAV 582
Query: 421 HGTISKLAQDGTARAKRKATGILERLKR 448
+ L+++GT R KRKA +LE L++
Sbjct: 583 V-PLMDLSKNGTERGKRKAISLLELLRK 609
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 260/442 (58%), Gaps = 24/442 (5%)
Query: 20 LKKELQKLVRLIVDD--VDYRTET---IDQARDTLCALKELKTKKRSLSLKLHETVSCPE 74
L++EL+K++ ++D V R ET ID+A L LK +++KKR +V P+
Sbjct: 18 LRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILNRLKIVESKKRKRESD-SSSVEVPK 76
Query: 75 EFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREM 134
EFKC LSK +M DPVI+ SGQT+++ YI WL + TCP +QVL LTPNHLI E+
Sbjct: 77 EFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNHLINEL 135
Query: 135 ISQWCRSQGIELP----NSVQYINEEGITEADRDHFLSLLKKMSA---TLPDQTEAAKEL 187
I++WC + + P + + Y+ TE D SLL+++S+ ++ DQTEAAKEL
Sbjct: 136 ITRWCLANKYDRPAPKPSDIDYV-----TELFTDGIESLLQRISSPSSSVADQTEAAKEL 190
Query: 188 RLLTKRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 246
L T++ + R F E D+I +LL+PLS E NP LQE+++T L N+S + NK
Sbjct: 191 ALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTFEKNK 250
Query: 247 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 306
++AE VIPLL +++ G++ TR NA L +LS +DSNK +IG S ALK LIDL+ E
Sbjct: 251 TVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGE 310
Query: 307 -GHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTN 364
SA D A+ +LC EN +A+ G +K I ++ E LA LA++S +
Sbjct: 311 LDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFESLAALALISPH 370
Query: 365 HRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW--KAMREEESTHG 422
R ++E+ +LG + +L I+R+++C EN + I+ + R + K + EEE+ H
Sbjct: 371 ERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAKSRERSIKKILAEEENQHK 430
Query: 423 TISKLAQDGTARAKRKATGILE 444
T +K+A G+ A KA GIL+
Sbjct: 431 TFTKIATQGSVVAVMKAQGILQ 452
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 227/383 (59%), Gaps = 17/383 (4%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
P++F+CP+S E+MRDPVI++SGQT++R I++W++ G+ TCP+TQQ L+ T LTPN+++R
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 133 EMISQWCRSQGIELPNSVQYINEEGITE----ADRDHFLSLLKKMSATLP-DQTEAAKEL 187
+I+QWC + IE P + ++ A+ + L+ +++ P DQ AA E+
Sbjct: 317 SLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEI 376
Query: 188 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK 247
RLL KR R E+ AIP L+ LS + +QE +T LLNLSI +NNK
Sbjct: 377 RLLAKRNADNRVAIAEA-GAIPLLVGLLSTP------DSRIQEHSVTALLNLSICENNKG 429
Query: 248 LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEG 307
+ + IP ++ L+ G++E R NAAA LF+LS +D NK IG GA+ PL+ LL+EG
Sbjct: 430 AIV-SAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEG 488
Query: 308 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTNH 365
Q KD A+A+FNLCI NK +A+R G + + + + + VDE LAILA+LS++
Sbjct: 489 TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHP 548
Query: 366 RAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTIS 425
IG V ++ IR + RN+EN A+L +C D + ++ G +
Sbjct: 549 EGKAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCSGD-PQHLVEAQKLGLMGPLI 606
Query: 426 KLAQDGTARAKRKATGILERLKR 448
LA +GT R KRKA +LER+ R
Sbjct: 607 DLAGNGTDRGKRKAAQLLERISR 629
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 253/455 (55%), Gaps = 26/455 (5%)
Query: 8 DSDPTVMPKATELKKELQKLVRLIVDDVDYRTET-IDQARDTLCALKELKTKKRSLSLKL 66
DS A L +EL K++ I D + ID+A L L+++++K +
Sbjct: 3 DSTADESTNADTLWRELHKVLPEIWYDGGGKDHCEIDEAIRILTCLRKIESKNPESDIS- 61
Query: 67 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILT 126
V P+EF C LS ++M +P+++ASGQTF++ YI WLK RTCPRT+QVL H +
Sbjct: 62 --PVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMI 118
Query: 127 PNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA--TLPDQTEAA 184
PNHLI E+I +WC + P + + + + SLL+++S+ ++ DQTEAA
Sbjct: 119 PNHLINEVIKEWCLIHNFDRPKT-----SDEVIDLFTGDLESLLQRISSPSSVEDQTEAA 173
Query: 185 KELRLLTKRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHD 243
KEL L KR S F + D+I +LL+PLS S+ NP E+++T L S +
Sbjct: 174 KELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISE---DSNPEFLENIVTALHIFSTSE 230
Query: 244 NNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDL 303
NK LVAE P+V+PLL ++ GT+ TR ++AA + +LS DSNK +IG S LK LI +
Sbjct: 231 KNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHV 290
Query: 304 LDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLST 363
++EG A + SA+ NLC E +AV +G + +KKI G +V LL++LA +ST
Sbjct: 291 IEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVST 350
Query: 364 -NHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRT---------KWKA 413
NH+ EE+ +LG + + I+R S N EN + I++ IC S + K
Sbjct: 351 QNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLREEKRDV 410
Query: 414 MREEESTHGTISKLAQDGTARAKRKATGILERLKR 448
+ EEE+ HGT ++L RA A ILE + R
Sbjct: 411 VLEEENKHGTFTRLENQEAGRATSLAKRILEWILR 445
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 225/390 (57%), Gaps = 26/390 (6%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
PEEF+CP+S ELM DPVI++SGQT++R I++WL+ G+ TCP+TQ+ L+ I+TPN+++R
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 133 EMISQWCRSQGIELPN-----SVQYINEEGITEADRDH--FLSLLKKMSATLP-DQTEAA 184
+I+QWC S GIE P + D +H LL K+++ P D+ AA
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 185 KELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDN 244
E+RLL K+ R S AIP L++ L+ S + QE +T++LNLSI
Sbjct: 377 GEIRLLAKQNNHNRVAIAAS-GAIPLLVNLLTISN-----DSRTQEHAVTSILNLSICQE 430
Query: 245 NKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLL 304
NK + + +P ++ L+ G++E R NAAA LF+LS +D NK IG +GA+ PL+ LL
Sbjct: 431 NKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLL 490
Query: 305 DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM--DGVHVDELLAILAMLS 362
EG Q KD A+A+FNLCI NK +AVR G V V+++ + + VDE L+ILA+LS
Sbjct: 491 SEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILS 550
Query: 363 TNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHG 422
++ E+G V ++ IR S RNKEN A+L +C W E+
Sbjct: 551 SHPDGKSEVGAADAVPVLVDFIR-SGSPRNKENSAAVLVHLC-----SWNQQHLIEAQKL 604
Query: 423 TISKL----AQDGTARAKRKATGILERLKR 448
I L A++GT R KRKA +L R R
Sbjct: 605 GIMDLLIEMAENGTDRGKRKAAQLLNRFSR 634
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 232/385 (60%), Gaps = 15/385 (3%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P+EF+CP+S ELM+DPVI+++GQT++R I++W+ +G+ TCP TQQ +S + LTPN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 130 LIREMISQWCRSQGIELPNSVQYINE--EGITEADRDHFLSLLKKM-SATLPDQTEAAKE 186
++R +ISQWC + G+E P N+ + ++R + +LL K+ S +Q AA E
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 187 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 246
LRLL KR + R E+ AIP LLS LS S QE +T LLNLSIH++NK
Sbjct: 391 LRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRT------QEHAVTALLNLSIHEDNK 443
Query: 247 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 306
+ + +P ++ L++G++E R NAAA LF+LS +D K IG GA+ L+ LL E
Sbjct: 444 ASIISS-GAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGE 502
Query: 307 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTN 364
G Q KD A+A+FNLCI NK RA+R G V +I+ + + G +DE +AIL++LS++
Sbjct: 503 GSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSH 562
Query: 365 HRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE-STHGT 423
IG V ++ +I T RN+EN A++ +C + R +E
Sbjct: 563 PEGKAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVP 621
Query: 424 ISKLAQDGTARAKRKATGILERLKR 448
+ +LA +GT R KRKA +LER+ R
Sbjct: 622 LRELALNGTDRGKRKAVQLLERMSR 646
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 232/385 (60%), Gaps = 15/385 (3%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P+EF+CP+S ELM+DPVI+++GQT++R I++W+ +G+ TCP TQQ +S + LTPN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 130 LIREMISQWCRSQGIELPNSVQYINE--EGITEADRDHFLSLLKKM-SATLPDQTEAAKE 186
++R +ISQWC + G+E P N+ + ++R + +LL K+ S +Q AA E
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 187 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 246
LRLL KR + R E+ AIP LLS LS S QE +T LLNLSIH++NK
Sbjct: 391 LRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRT------QEHAVTALLNLSIHEDNK 443
Query: 247 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 306
+ + +P ++ L++G++E R NAAA LF+LS +D K IG GA+ L+ LL E
Sbjct: 444 ASIISS-GAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGE 502
Query: 307 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTN 364
G Q KD A+A+FNLCI NK RA+R G V +I+ + + G +DE +AIL++LS++
Sbjct: 503 GSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSH 562
Query: 365 HRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE-STHGT 423
IG V ++ +I T RN+EN A++ +C + R +E
Sbjct: 563 PEGKAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVP 621
Query: 424 ISKLAQDGTARAKRKATGILERLKR 448
+ +LA +GT R KRKA +LER+ R
Sbjct: 622 LRELALNGTDRGKRKAVQLLERMSR 646
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 255 bits (651), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 231/396 (58%), Gaps = 27/396 (6%)
Query: 68 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTP 127
+ ++ PE+F CP+S ELM+DP I+++GQT++R +IQRW+ GN +CP+TQQ L + LTP
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP 298
Query: 128 NHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA-----------T 176
N+++R +ISQWC IE P Y+N G T+ F L MSA +
Sbjct: 299 NYVLRSLISQWCTKHNIEQPGG--YMN--GRTKNSDGSFRDLSGDMSAIRALVCKLSSQS 354
Query: 177 LPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTL 236
+ D+ A E+R L+KR R L E+ AIP L+ L+ + QE+ +T +
Sbjct: 355 IEDRRTAVSEIRSLSKRSTDNRILIAEAG-AIPVLVKLLTSDG-----DTETQENAVTCI 408
Query: 237 LNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGA 296
LNLSI+++NK+L+ V +++ LR+G++E R NAAA LF+LS D NK +IG SGA
Sbjct: 409 LNLSIYEHNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSLSLADENKIIIGASGA 467
Query: 297 LKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH---VDE 353
+ L+DLL G KD A+A+FNLCI NK RAVR G V ++K + D DE
Sbjct: 468 IMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADE 527
Query: 354 LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKA 413
L IL++L++N A I + ++ +++ RN+EN AIL +C D K +
Sbjct: 528 ALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLIS 586
Query: 414 MREEESTHGTISKLAQDGTARAKRKATGILERLKRT 449
+ + + +L++DGT RAKRKA +LE L+++
Sbjct: 587 IGRLGAVV-PLMELSRDGTERAKRKANSLLELLRKS 621
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 220/383 (57%), Gaps = 22/383 (5%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
P EF CP++ E+M DPVI+A+GQT+++ IQ+W AG++TCP+T+Q L H L PN ++
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 133 EMISQWCRSQGIELPN---SVQYINEEGITEADRDHFLSLLKKMSAT-LPDQTEAAKELR 188
+I QWC ++P S NE+ +D L++ +S++ L +Q + K++R
Sbjct: 351 NLIMQWCEKNNFKIPEKEVSPDSQNEQ------KDEVSLLVEALSSSQLEEQRRSVKQMR 404
Query: 189 LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKL 248
LL + P R L + AIP L+ LS ++GI QE+ +TTLLNLSI + NKKL
Sbjct: 405 LLARENPENRVLIANA-GAIPLLVQLLSYP--DSGI----QENAVTTLLNLSIDEVNKKL 457
Query: 249 VAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGH 308
++ IP +++ L +G E R N+AAALF+LS LD NK IG S + PL+DLL G
Sbjct: 458 ISNEG-AIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGT 516
Query: 309 QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHR 366
KD +A+FNL + NK RA+ G V +L + D +DE L+IL +L+++
Sbjct: 517 LRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPE 576
Query: 367 AVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISK 426
+ IG L + ++ IR+ T +NKE ++L + S+ + + + + + +
Sbjct: 577 GRQAIGQLSFIETLVEFIRQGT-PKNKECATSVLLELG-SNNSSFILAALQFGVYEYLVE 634
Query: 427 LAQDGTARAKRKATGILERLKRT 449
+ GT RA+RKA +++ + ++
Sbjct: 635 ITTSGTNRAQRKANALIQLISKS 657
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 224/455 (49%), Gaps = 45/455 (9%)
Query: 17 ATELKKELQKLVRLIVDDVDYRTET-----IDQARDTLCALKELKTKKRSLSLKLHETVS 71
+ L E+Q+L I D +D R+++ I R + C L T + + H+++S
Sbjct: 213 SASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVRYSKCVLYGPSTP--APDFRRHQSLS 270
Query: 72 ---CPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 128
P +F+CP++ ELMRDPV++A+GQT+DR I W+++G+ TCP+T QVL HT L PN
Sbjct: 271 DANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPN 330
Query: 129 HLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAK--- 185
++ +I WCR Q I + + G A + K M + L ++ A
Sbjct: 331 RALKNLIVLWCRDQKIPF----ELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNG 386
Query: 186 ---ELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIH 242
ELR L K RA E+ AIP+L+ L+ ++C P+LQ + +TT+LNLSI
Sbjct: 387 VVFELRALAKSDTVARACIAEA-GAIPKLVRYLA-TEC-----PSLQINAVTTILNLSIL 439
Query: 243 DNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVIG-KSGALKPL 300
+ NK + ET + +++ LRSG T E ++NAAA LF+L+ + + + +G K+ + L
Sbjct: 440 EQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGL 499
Query: 301 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAM 360
+DL +G S+ +D AI NL EN R V G +M G D +
Sbjct: 500 VDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAG--------VM-GAAGDAFQELPEE 550
Query: 361 LSTNHRAVEEIGDLGGVSCMLRIIR------ESTCDRNKENCIAILHTICLSDRTKWKA- 413
AV G L VS +IR D +E+ A L T+C ++ A
Sbjct: 551 AVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAE 610
Query: 414 MREEESTHGTISKLAQDGTARAKRKATGILERLKR 448
M I ++ GTAR RKA ++ L+R
Sbjct: 611 MAAIPGIERVIWEMIGAGTARGGRKAASLMRYLRR 645
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 222/415 (53%), Gaps = 31/415 (7%)
Query: 56 KTKKRSLSLKLHET-VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCP 114
K +K ++ ++ +T ++ P++F CP+S +LM DPVI+++GQT+DR I RW++ G+ TCP
Sbjct: 288 KPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCP 347
Query: 115 RTQQVLSHTILTPNHLIREMISQWCRSQGIEL-------PNS--VQYINEEGITEADRDH 165
+T Q+L + + PN ++ +I QWC + GI PN + + EA++
Sbjct: 348 KTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKAT 407
Query: 166 FLSLLKKMS-ATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGI 224
L+K ++ + QT AA+E+RLL K RA E+ AIP L L+ EN I
Sbjct: 408 VSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTS---ENAI 463
Query: 225 NPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSA 283
QE+ +T +LNLSI++ NK + E + ++ L SG T+E + NAAA LF+LSA
Sbjct: 464 ---AQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSA 520
Query: 284 LDSNKEVIG-KSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 342
+ K+ I ++ L LL G KD +A++NL +N +R + GGVS ++
Sbjct: 521 VHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLV 580
Query: 343 KKIMD-GVHVDELLAILAMLSTNHRAVEEIG-DLGGVSCMLRIIRESTCDRNKENCIAIL 400
+ + GV + A+ ++ + A E IG + V+ ++ ++R T R KEN +A L
Sbjct: 581 GALKNEGVAEEAAGALALLVRQSLGA-EAIGKEDSAVAGLMGMMRCGT-PRGKENAVAAL 638
Query: 401 HTICLSDRTKWKAMREE----ESTHGTISKLAQDGTARAKRKATGILERLKRTVN 451
+C R+ A+ E+ + G + L GT RA+RKA + +R N
Sbjct: 639 LELC---RSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRREN 690
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 209/403 (51%), Gaps = 37/403 (9%)
Query: 69 TVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 128
+ S P+EF CP+S +LMRDPV+ ++GQT+DRP I +W++ G+ TCP + Q L+ L PN
Sbjct: 294 SFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPN 353
Query: 129 HLIREMISQWCRSQGIEL--PNSVQYINE--------EGITEADRDHFLSLLKKMSATLP 178
+R +ISQWC G++ P S + + E EA++ L++ L
Sbjct: 354 RALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVR----MLE 409
Query: 179 DQTE-----AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 233
D +E AAKE+RLL K RA + AIP L L + QE+ +
Sbjct: 410 DGSENVKAVAAKEIRLLAKTGKQNRAFIAD-LGAIPLLCRLLLSNDWMA------QENAV 462
Query: 234 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVI- 291
T LLNLSI + NK + E + L++ L++G T E + NAAA LF+LS + + K++I
Sbjct: 463 TALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIM 522
Query: 292 GKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHV 351
+ GA++ L +L +G KD A+FNL E+ AR + V +++ + +
Sbjct: 523 NEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVS 582
Query: 352 DELLAILAMLSTNHRAVEEIGDLGGV-SCMLRIIRESTCDRNKENCIAILHTICLSDRTK 410
+E LA+L V +G V + ++ ++R T + KEN ++ L+ IC R
Sbjct: 583 EEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGT-PKGKENAVSALYEIC---RRG 638
Query: 411 WKAMREE----ESTHGTISKLAQDGTARAKRKATGILERLKRT 449
A+ + + I + +GT RAK+KA+ I++ +R+
Sbjct: 639 GSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 218/485 (44%), Gaps = 102/485 (21%)
Query: 61 SLSLKLHETVS------------CPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKA 108
SL+ ++HE +S P +F+C LS ELM DPVI+ASGQTF+R +IQ+W+
Sbjct: 217 SLTTQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDM 276
Query: 109 GNRTCPRTQQVLSHTILTPNHLIREMISQWCRSQGIELPNSVQYI--------------- 153
G CP+T+Q LSHT LTPN ++R ++ WC + + P+ ++ I
Sbjct: 277 GLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRA 336
Query: 154 --NEEGITEADRDHFLSLLKKMSATLPD----------QTEAAKELRLLTKRMPSFRALF 201
+E G +E+ L + SA+ P + A R LT+ ++
Sbjct: 337 SSSENGHSESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWK-FP 395
Query: 202 GESHDAIPQLL-SPLSESKCENGINPNLQ---EDVITTLLN-----------LSIHDNNK 246
E H P ++ + + E+ + I ++ +D+ ++ L+ L+ + +
Sbjct: 396 EERHWRHPGIIPATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDN 455
Query: 247 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSG----------- 295
++V IP L+ L S +++A L LS D+NK +I +SG
Sbjct: 456 RIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKT 515
Query: 296 -------------------------------ALKPLIDLLDEGHQSAMKDVASAIFNLCI 324
A++PL+DLL G S KD A+A+FNL I
Sbjct: 516 GYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSI 575
Query: 325 THENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDLGGVSCMLR 382
HENK + + G V ++ ++MD V++ + +LA L+T IG+ GG+ ++
Sbjct: 576 HHENKTKVIEAGAVRYLV-ELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVE 634
Query: 383 IIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGI 442
++ E R KEN A L +C + K+ E + L + GTAR K KA +
Sbjct: 635 VV-ELGSARGKENATAALLQLC-THSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNL 692
Query: 443 LERLK 447
L+ K
Sbjct: 693 LKYFK 697
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 152/276 (55%), Gaps = 13/276 (4%)
Query: 174 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 233
S++L Q +A ELRLL K R + G S AI L+ L + QE+ +
Sbjct: 552 SSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYSTDSAT------QENAV 604
Query: 234 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 293
T LLNLSI+DNNKK +A+ + PL+ L +G+ E + N+AA LF+LS ++ NK IG+
Sbjct: 605 TALLNLSINDNNKKAIADAGAIEPLIH-VLENGSSEAKENSAATLFSLSVIEENKIKIGQ 663
Query: 294 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--V 351
SGA+ PL+DLL G KD A+A+FNL I ENKA V+ G V ++ +MD V
Sbjct: 664 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLI-DLMDPAAGMV 722
Query: 352 DELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 411
D+ +A+LA L+T IG GG+ ++ ++ E R KEN A L + ++ ++
Sbjct: 723 DKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV-ELGSARGKENAAAALLQLS-TNSGRF 780
Query: 412 KAMREEESTHGTISKLAQDGTARAKRKATGILERLK 447
M +E + L+Q GT RA+ KA +L +
Sbjct: 781 CNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFR 816
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 18/135 (13%)
Query: 14 MPKATELKKELQKLVRLIVDDVDYRTETIDQARDTLCALKELKTKKRSLSLKLHETVSCP 73
M + +E E++ L +LIV +++ + L +K+ +T +V+
Sbjct: 190 MAEQSENNAEVEFLDQLIV--------IVNRMHERLLLIKQTQTS----------SVAIL 231
Query: 74 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 133
+F CPLS E+M DPVI++SGQT+++ +I+RW+ G + CP+T+Q L+HT L PN+ ++
Sbjct: 232 ADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKA 291
Query: 134 MISQWCRSQGIELPN 148
+I+ WC + ++LP+
Sbjct: 292 LIANWCETNDVKLPD 306
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 175/336 (52%), Gaps = 19/336 (5%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHT-ILTPNHLI 131
P +F+CP+S E+M DPVIL SG TFDR IQ+W+ +GNRTCP T+ LS T L PNH +
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 132 REMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLT 191
R +I + + L S + ++ + + +S L S++ + E+ L LT
Sbjct: 66 RSLILNFAH---VSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLT 122
Query: 192 KRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK-KLVA 250
KR S R ES L C + N LQE ++ LLNLS+ D+NK LVA
Sbjct: 123 KRDSSIRRKVTESGAVRAAL-------DCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVA 175
Query: 251 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKS-GALKPLIDLLDEGHQ 309
+ VI ++ LR G+ + ++ AA L +L+ ++ NK IG A+ L+ LL G+
Sbjct: 176 DG--VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGND 233
Query: 310 SAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVE 369
K+ A+A++ LC +N+ R V G V ++++ G ++ + +L +L E
Sbjct: 234 RERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSG--LERAVEVLGLLVKCRGGRE 291
Query: 370 EIGDLGG-VSCMLRIIRESTCDRNKENCIAILHTIC 404
E+ + G V ++ ++R + + + IL+ +C
Sbjct: 292 EMSKVSGFVEVLVNVLRNGNL-KGIQYSLFILNCLC 326
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 200/397 (50%), Gaps = 42/397 (10%)
Query: 74 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 133
++ +CP+S E+M DPV+L SG T+DR I +W +GN TCP+T + L T+L N +++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 134 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSL--LKKMSATL-------PDQTEAA 184
+I + + G+ + ++G + D L+ K++A D+ E
Sbjct: 340 VIQSYSKQNGV-------VMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMV 392
Query: 185 K---ELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSI 241
K E+R+LTK +R+ E+ + L+ L +P +QE+ + ++NLS
Sbjct: 393 KALVEIRILTKTSTFYRSCLVEA-GVVESLMKILRSD------DPRIQENAMAGIMNLSK 445
Query: 242 HDNNK-KLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVIGK-SGALK 298
K ++V E + L+++ L G E+R AAAALF LS+L +IG+ S A+
Sbjct: 446 DIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIP 505
Query: 299 PLIDLL---DEGHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVIL-----KKIMDGV 349
L+ ++ D G SA ++ AI +L + +N R + G V V+L ++I DGV
Sbjct: 506 GLVRIVKSCDYG-DSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGV 564
Query: 350 HVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD-RNKENCIAILHTICLSDR 408
D +AILA ++ + + GG+ ++I+ S K++C+A+L +C +
Sbjct: 565 TADS-MAILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGG 623
Query: 409 TK-WKAMREEESTHGTISKLAQDGTARAKRKATGILE 444
+ ++ + S G++ + +G +KA+ +++
Sbjct: 624 SDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIK 660
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 12/270 (4%)
Query: 180 QTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 239
+T AA E+R LT R G P L SE K QE +T LLNL
Sbjct: 489 KTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLT-------QEHAVTALLNL 541
Query: 240 SIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKS-GALK 298
SI + NK ++ E + PL+ L +G + N+AA+LF+LS L N+E IG+S A++
Sbjct: 542 SISELNKAMIVEVGAIEPLV-HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQ 600
Query: 299 PLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKI-MDGVHVDELLAI 357
L++LL +G KD ASA+FNL ITH+NKAR V+ V +++ + D VD+ +A+
Sbjct: 601 ALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVAL 660
Query: 358 LAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREE 417
LA LS + I GG+ ++ + + R KEN ++L +CL + K+ + +
Sbjct: 661 LANLSAVGEGRQAIVREGGIPLLVETVDLGS-QRGKENAASVLLQLCL-NSPKFCTLVLQ 718
Query: 418 ESTHGTISKLAQDGTARAKRKATGILERLK 447
E + L+Q GT RAK KA +L +
Sbjct: 719 EGAIPPLVALSQSGTQRAKEKAQQLLSHFR 748
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 64 LKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHT 123
L++ + +S P F+CPLS ELM DPVI+ASGQTFDR I++WL G CPRT+QVL+H
Sbjct: 230 LEVAKGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQ 289
Query: 124 ILTPNHLIREMISQWCRSQGIEL 146
L PN+ ++ MI+ W + I L
Sbjct: 290 ELIPNYTVKAMIASWLEANRINL 312
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 192/432 (44%), Gaps = 67/432 (15%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ +CP+TQQ L H LTPN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 133 EMISQWCRSQGI----------------------ELPNS---------------VQYINE 155
+I+ WC GI E PNS V + E
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEE 395
Query: 156 EGITEADRD---------------HFLSLLKKMSATLPDQTEAAKE------LRLLTKRM 194
E++R + L + + A + + + AK+ +R+L K
Sbjct: 396 SSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDN 455
Query: 195 PSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPM 254
R L G ++ + L L + +N N QE L NL++++N K + T
Sbjct: 456 EEARILMG-ANGFVEAFLQFLESAVHDN--NAAAQETGAMALFNLAVNNNRNKELMLTSG 512
Query: 255 VIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK- 313
VIPLL + +++ A A LS L+ K VIG S A+ ++LL + ++ K
Sbjct: 513 VIPLLEKMISCS--QSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKL 570
Query: 314 DVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEI 371
D A++NL N + + + G H +++ LA+L L+++ EE+
Sbjct: 571 DALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEM 630
Query: 372 GDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDG 431
G+ L + ++ +E ++ L +C + + + +E +S ++ +G
Sbjct: 631 ITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVS-ISVNG 689
Query: 432 TARAKRKATGIL 443
+ R + K+ +L
Sbjct: 690 SPRGRDKSQKLL 701
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ TCP+T Q LSH LTPN+ ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 133 EMISQWCRSQGIELPNS------VQY---------------------------------- 152
+IS WC G+++P+ + Y
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEE 399
Query: 153 ---INEEGITEADRDHFLSLLKKMSA---------TLPDQTEAAKELRLLTKRMPSFRAL 200
I EE ++ ++L+++ + TL + +++R+L K R L
Sbjct: 400 SGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARIL 459
Query: 201 FGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLM 260
GE + + LL L + EN N + Q+ L NL++ +N K + +IPLL
Sbjct: 460 MGE-NGCVEALLQFLGSALNEN--NASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLE 516
Query: 261 DALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLL-DEGHQSAMKDVASAI 319
+ L + + A LS L+ K VIG S A+ +++LL E D ++
Sbjct: 517 EML--CNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSL 574
Query: 320 FNL 322
F+L
Sbjct: 575 FHL 577
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 192/393 (48%), Gaps = 35/393 (8%)
Query: 74 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 133
E+ CP+S E+M DPV++ +G T+DR I +W +GN TCP T ++L+ T L N +R+
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQ 349
Query: 134 MISQWCRSQGIELPN------SVQYINEEGITEADRDHFLSLLKKMSATLPDQTE----- 182
+I + C++ GI L S + E + ++ K +++ L + E
Sbjct: 350 VIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIA--KFLTSELINGGEEMIYR 407
Query: 183 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIH 242
A +E+R+ TK R+ ++ P L K + ++ +QE+ + +LNLS H
Sbjct: 408 AVREIRVQTKTSSFNRSCLVKAGAVTPLL-------KLLSSVDIRIQENAMAGILNLSKH 460
Query: 243 DNNKKLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVIGKS-GALKPL 300
K +A + I L++ L G ETR +A+ALF LS+++ +IG++ A+ L
Sbjct: 461 VTGKSKIAGEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGL 518
Query: 301 IDLL--DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL-----KKIMDGVHVDE 353
++++ D+ SA + A+ L + +N R + G V ++L +I G+ D
Sbjct: 519 MNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTAD- 577
Query: 354 LLAILAMLSTNHRAVEEIGDLGGVSCMLRII--RESTCDRNKENCIAILHTICLS-DRTK 410
LA LA L+ + GG+ ++I+ E + K++C+ ++ +CL+ R
Sbjct: 578 CLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDV 637
Query: 411 WKAMREEESTHGTISKLAQDGTARAKRKATGIL 443
+ + G++ + +G +KA+ ++
Sbjct: 638 VGVLVKNSLVMGSLYTVLSNGEYGGSKKASALI 670
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 181/403 (44%), Gaps = 40/403 (9%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
+ P F+CP+S +LM DPV +++GQT+DR I W+ GN TCP T+ LS L PNH
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 130 LIREMISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSA------TLPD 179
+R +I +WC RS G+E +P Q AD SLL + SA ++
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQ--------PADPISVRSLLSQASAITGTHVSVRS 123
Query: 180 QTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 239
+ A + LR L + R L H+A L+ L ++ L + + L+ L
Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLL 182
Query: 240 SIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAA----ALFTLSALDSNKEVIGKSG 295
+ + + VA P + + L +IE R NAAA L ++D + G
Sbjct: 183 HMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDS 242
Query: 296 ALKPLIDLLDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MDGVH 350
+ ++DLL S A+K AIF LC+ + + A+ G +++ ++ D
Sbjct: 243 IFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD 302
Query: 351 VDELLAILAMLSTNHRAVEEIGDLG-GVSCMLR-IIRESTCDRNKENCIAILHTICLSDR 408
+ LA + +L G+ V M++ I+R S DR E L +C
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVS--DRATEYAAGALLALC---- 356
Query: 409 TKWKAMREEESTHG----TISKLAQDGTARAKRKATGILERLK 447
T + R+E + G + + D T RAKRKA +L+ L+
Sbjct: 357 TAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLR 399
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 172/382 (45%), Gaps = 44/382 (11%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-TCPRTQQVLSHTILTPN 128
+ P F+CP+S ELM+DPV + +GQT+DR I+ W+ GN TCP T+ LS L PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 129 HLIREMISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSA------TLP 178
H +R +I +WC RS G+E +P Q AD +LL + SA ++
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQ--------PADPTSVRALLSQASAITGTHVSVR 123
Query: 179 DQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPL-SESKCENGINPNLQEDVITTLL 237
+ A + LR + R L +H+A L+ L SE+ + L + + L+
Sbjct: 124 SRAAALRRLRGFARDSDKNRVLIA-AHNATEILIKILFSETT-----SSELVSESLALLV 177
Query: 238 NLSIHDNNKKL-VAETPMVIPLLMDALRSGTIETRSNAAAALFTLS----ALDSNKEVIG 292
L I + N+ + ++ P + L L +IETR NAAA + +S + D +
Sbjct: 178 MLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISN 237
Query: 293 KSGALKPLIDLLDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MD 347
+ ++DLL S A+K +F LC + A+ G +++ ++ D
Sbjct: 238 SESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFD 297
Query: 348 GVHVDELLAILAMLSTNHRAVEEIGDLGGVSCML--RIIRESTCDRNKENCIAILHTICL 405
+ LA + +L G+ +L I+R S DR E L +C
Sbjct: 298 RCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVS--DRATEYAAGALLALCT 355
Query: 406 SDRTKWKAMREEESTHGTISKL 427
++ +W REE + G + +L
Sbjct: 356 AEE-RW---REEAAGAGVVVQL 373
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 228 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 287
+Q +V L+NLS+ +NK + + +V PL+ D L+ G++E + ++A +F+L+ D N
Sbjct: 286 VQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLI-DVLKCGSVEAQEHSAGVIFSLALEDEN 344
Query: 288 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 347
K IG G L+PL+ L+ G + D A A+++L + N+ + V+ G V ++L +
Sbjct: 345 KTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404
Query: 348 GVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIR--ESTCDRNKENCIAILHTICL 405
G + +L IL +++ + + D GGV CM+ ++R + +E+C+A+L+ +
Sbjct: 405 GQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSH 464
Query: 406 SDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 447
++K + + + K+ + G RAK+KA +LE L+
Sbjct: 465 DGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLR 506
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 36/289 (12%)
Query: 162 DRDHFLSLLKKMSATLPDQTEAAKELR--LLTKRMPSF-RALFGESHDAIPQLLSPLSES 218
D + L LL+KM T ++++LR L T R+ SF R+L ++ +
Sbjct: 250 DHEQGLILLRKM-------TRSSEDLRVSLCTDRILSFLRSLLVSRYNLV---------- 292
Query: 219 KCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAAL 278
Q + +++NLS+ NK + + V PLL+D L+SGT E + + A AL
Sbjct: 293 ----------QTNAAASVVNLSLEKQNKVKIVRSGFV-PLLIDVLKSGTTEAQEHVAGAL 341
Query: 279 FTLSALDSNKEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGG 337
F+L+ D NK VIG GA++PL+ L + A +D A A+++L + N+ R VR G
Sbjct: 342 FSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGA 401
Query: 338 VSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE---STCDRNKE 394
V +L + G +L +L L+ + D V+ ++ +RE + +E
Sbjct: 402 VPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARE 461
Query: 395 NCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 443
NC+A+L T+C + +++ + E + ++ ++G R K KA+ IL
Sbjct: 462 NCVAVLLTLCQGN-LRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 63 SLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQ--RWLKAGNRTCPRTQQVL 120
+L H+ P EF CP++ LM DPV+++SGQTF+R +Q R L T+ L
Sbjct: 22 TLPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDL 81
Query: 121 SHTILTPNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRD 164
S I PN ++ I WC Q ++ P EG+ A D
Sbjct: 82 STVI--PNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVVRARMD 123
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 25/293 (8%)
Query: 66 LHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-TCPRTQQVLSHTI 124
+ E + P F CP+S E+M+DPVI+++G T+DR I++WL AG + +CP T+Q ++
Sbjct: 6 MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65
Query: 125 LTPNHLIREMISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQ 180
LTPNH +R +I WC S G+E +P I + I + RD +++ +Q
Sbjct: 66 LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDS--------ASSHENQ 117
Query: 181 TEAAKELR-LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 239
+ K LR ++++ + R L +P+ L+ + + ENG +L ++ + L +L
Sbjct: 118 VKCLKRLRQIVSENATNKRCL---EAAGVPEFLANIVSNDSENG---SLTDEALNLLYHL 171
Query: 240 SIHDN---NKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFT-LSALDSNKEVIGKSG 295
+ N + ++ L ++ G E+R A L L D + + K
Sbjct: 172 ETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPE 231
Query: 296 ALKPLIDLLDEG-HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 347
++ +LD+ Q A K + N+C N+ +AV G +SVI++ +MD
Sbjct: 232 VFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD 284
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 56/76 (73%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ TCP+TQQ L H LTPN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 133 EMISQWCRSQGIELPN 148
+I+ WC G ++P+
Sbjct: 333 GLIASWCEQNGTQIPS 348
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P +F+CP+S ELM+DPVI+ASG T+DR I++W ++G +TCP T VL+ PNH
Sbjct: 31 ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNH 90
Query: 130 LIREMISQWCRSQ---GIE 145
IR MI WC S GIE
Sbjct: 91 TIRRMIQGWCGSSLGGGIE 109
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 228 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 287
+Q + + +L+NLS+ NK + V P+L+D L+SG+ E + +AA +F+LS D N
Sbjct: 282 VQTNALASLVNLSLDKKNKLTIVRLGFV-PILIDVLKSGSREAQEHAAGTIFSLSLEDDN 340
Query: 288 KEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCITHENKARAVRDGGVSVILKKIM 346
K IG GAL+PL+ L + D A A+++L + N+++ VR G V + +
Sbjct: 341 KMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVR 400
Query: 347 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRES---------TCDRNKENCI 397
G L ++ L+ + D V+ ++ +RE + +ENC+
Sbjct: 401 SGESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCV 460
Query: 398 AILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTV 450
A L + + ++K + +E + ++ + GT RA+ KA IL+ ++ V
Sbjct: 461 AALFALS-HESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQLMRERV 512
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQ--RWLKAGNRTCPRTQQVLSHTILTPNHL 130
P EF CP+SK +M DPV+++SGQTF+R +Q R L + + + + + PN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 131 IREMISQWCRSQGIELPNSVQYINEEGI 158
++ I WC + G+ P Y E I
Sbjct: 94 MKSTIDTWCDTVGVSRPQPPDYSTVERI 121
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P EF+CP+S +LM+DPVI+++G T+DR I+ W+ +GN+TCP T VL+ PNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 130 LIREMISQWCRSQG 143
IR+MI WC +G
Sbjct: 89 TIRKMIQGWCVEKG 102
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 122/227 (53%), Gaps = 9/227 (3%)
Query: 228 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 287
+Q + +++NLS+ NK + + V PLL+D L+SG+ E + + ALF+L+ + N
Sbjct: 241 VQTNAAASIVNLSLEKPNKLKIVRSGFV-PLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299
Query: 288 KEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 346
K VIG GA++PL+ L + A +D A A+++L + N++R V+ G V ++L I
Sbjct: 300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359
Query: 347 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRN----KENCIAILHT 402
G +L +L L+ + D VS ++ +RES + +ENC+ L T
Sbjct: 360 SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLT 419
Query: 403 ICLSDRTKWKAMREEESTHGTISKL--AQDGTARAKRKATGILERLK 447
+ + + +++ + E ++++ ++ G+ R K KA+ IL+ L+
Sbjct: 420 LSVGN-MRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLR 465
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQ--RWLKAGNRTCPRTQQVLSHTILTPNHL 130
P EF CP++ LM DPV++ASGQTF+R +Q R L + TQ LS I PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVI--PNLA 68
Query: 131 IREMISQWCRSQGIELPNSVQYINEEGITEADRD 164
++ I WC +E P Y EG+ D
Sbjct: 69 MKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMD 102
>sp|Q6K762|PUB73_ORYSJ U-box domain-containing protein 73 OS=Oryza sativa subsp. japonica
GN=PUB73 PE=2 SV=1
Length = 586
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 187/423 (44%), Gaps = 18/423 (4%)
Query: 39 TETIDQARDTLCALKELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFD 98
+ ++QA L L K K L + P L E+MRDPVIL SG + D
Sbjct: 150 SAVMEQAMTGLMDLTYRKAKPPELPYEFATRWPIPIAHDGTLQAEVMRDPVILPSGYSVD 209
Query: 99 RPYI--QRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQWCRSQGIELPNSVQYINEE 156
+ Y Q+ T T L +++ PNHL+R+MIS WC P++
Sbjct: 210 QTYQNNQKRQNPWTNTSTFTDHSLPYSLSVPNHLLRDMISAWCLDHSDLSPSTTSDTPST 269
Query: 157 GITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLS 216
+ ++ + +LK S Q EA K ++LLTK + + D IP L++
Sbjct: 270 PLEPSEEEQIQRILKLFSGNSASQREALKLIQLLTKTTKGVQPCLAKYADIIPVLIN--L 327
Query: 217 ESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA-ETPMVIPLLMDALRSGTIETRSNA- 274
K ++ +L+E+ +T +LNL++H N++++A + + + ++G R+++
Sbjct: 328 RRKYKSSWTQDLEEERLTIILNLTMHRQNREILAGQNELAGAIKKIVKKAGNRGKRTSSL 387
Query: 275 ---AAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR 331
A+ + LS D ++ + +G +K L +L + + A+AI L E +
Sbjct: 388 AKVASIVAVLSEFDMFRKRMLDAGGMKMLRGMLKIKDTEVITEAATAILALYADGEGEQP 447
Query: 332 AVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDR 391
A ++L+ M D +L +L L + R +I D + + +++
Sbjct: 448 ARFHEVPQMLLECHM---FTDGILLLLDRLPKSPRVFRKICDQALQLVNIVMAEDASGPV 504
Query: 392 NKE---NCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKR 448
++ + I++++ I D K A++ E I +L Q + R + +ER+ R
Sbjct: 505 TRKGILSAISLIYEIVERDVGKMNAVKNMED---FIERLRQLSSDRLPMQKMLQVERIIR 561
Query: 449 TVN 451
T++
Sbjct: 562 TLS 564
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 38/320 (11%)
Query: 66 LHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-TCPRTQQVLSHTI 124
+ + + P F CP+S ++M+DPVI+++G T+DR I++WL +G + +CP T+QV++ T
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60
Query: 125 LTPNHLIREMISQWCR---SQGIE-LPNSVQYIN----EEGITEADRDHF--LSLLKKMS 174
LTPNH +R +I WC S GIE +P I E+ I E+ H + LK++
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLR 120
Query: 175 ATLPDQTEAAKELRLLTKRMPSFRA-LFGESHDAIPQLLSPLSESK----CENGINPN-- 227
+ + T + L +P F A + S D S LS S C++ + N
Sbjct: 121 QIVSENTTNKRCLE--AAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRF 178
Query: 228 -----LQEDVITTLLNLSIHD-------NNKKLVAETPMVIPLLMDALRSGTIETRSNAA 275
L ++ ++ L +L + NNKK ++ L ++ G E+R+ AA
Sbjct: 179 DSSRSLMDEALSVLYHLDTSETALKSLLNNKK----GTNLVKTLTKIMQRGIYESRAYAA 234
Query: 276 AALFTLSAL-DSNKEVIGKSGALKPLIDLL-DEGHQSAMKDVASAIFNLCITHENKARAV 333
L L + D + ++ + +I +L D+ A + + C N+ +AV
Sbjct: 235 LLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAV 294
Query: 334 RDGGVSVILKKIMDGVHVDE 353
G +S+I++ +MD E
Sbjct: 295 EGGTISMIIELLMDDTFSSE 314
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
PE+FKC LS+ +M DPVI++SG TF+R IQ+W GN +CP +++ L L PN ++
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 133 EMISQWCRSQGIEL 146
IS+WC G+++
Sbjct: 280 SQISEWCAKNGLDV 293
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P FKCP+S ++MR PV L +G T+DR IQRWL GN TCP T Q+L PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 130 LIREMISQWCRSQG 143
++ +I+ W S G
Sbjct: 70 TLQRLINIWSDSIG 83
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 53 KELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRT 112
K+L K+ L+L E P F CP+S E M+DPV L +GQT++R I +W G+ T
Sbjct: 44 KKLDLKEMISELELPEI---PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCT 100
Query: 113 CPRTQQVLSHTILTPNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKK 172
CP T Q L ++TPN + ++I W + + + + + I L L+K
Sbjct: 101 CPTTMQELWDDLVTPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAI------EILGTLRK 154
Query: 173 MSATLPDQTEAAKELR-LLTKRMPSFRALFGESH-DAIPQLLSPLSESKCENGINPNLQE 230
A + A EL+ ++ + + + E I LLSP + +
Sbjct: 155 --AKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHA--------VGS 204
Query: 231 DVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAA 275
+ I L+NL + D++ K P + L++D L G+IET+ N A
Sbjct: 205 EAIAILVNLEL-DSDSKAGLMQPARVSLMVDMLNDGSIETKINCA 248
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 70 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 129
++ P F+CP+S ++M+ PV L +G T+DR IQRWL GN TCP T Q+L + PN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 130 LIREMISQWCRS 141
++ +I W S
Sbjct: 68 TLQRLIEIWSDS 79
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 22 KELQKLVRLIVDDVDYRTETIDQARDTLCALKELKTKKRSLSLKLHETVSCPEEFKCPLS 81
KEL L + + D D + E++ L ++EL+TK +SLS + P+EF CP++
Sbjct: 361 KELLNLTKESLAD-DLKIESLGLRSKVLRKIEELRTKVKSLSSGI------PDEFICPIT 413
Query: 82 KELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQW 138
+ELM+DPVI + G ++++ ++ W+ RT P T VL +LTPN ++ I++W
Sbjct: 414 RELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRW 470
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
P FKCP+S ++M+ PV L++G T+DR IQRWL GN TCP T Q+L + PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 133 EMISQWCRS 141
+I W S
Sbjct: 72 RLIDHWSDS 80
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTIL-TPNHLI 131
P++F CP++ ++ DPV L +GQT++R IQ WL+ GN TCP T+Q LS +IL N+++
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVL 571
Query: 132 REMISQWCRSQGIELPNSVQYIN 154
+ +I+ W + Q EL +N
Sbjct: 572 KRLITSW-KEQNPELAQEFSNVN 593
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTIL-TPNHLI 131
P++F CP++ ++ DPV L +GQT++R IQ WL+ GN TCP T+Q LS +IL N+++
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVL 571
Query: 132 REMISQWCRSQGIELPNSVQYIN 154
+ +I+ W + Q EL +N
Sbjct: 572 KRLITSW-KEQNPELAQEFSNVN 593
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
P F CP+S E M+DPV L +GQT++R I +W G+ TCP T Q L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 133 EMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELR-LLT 191
+I W + + + + + I L LKK + A EL+ ++
Sbjct: 125 HLIYTWFSQKYVLMKKRSEDVQGRAI------EILGTLKKAKGQ--ARVHALSELKQIVI 176
Query: 192 KRMPSFRALFGESH-DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 250
+ + + + E I LL P + + +V+ L++L + ++K +
Sbjct: 177 AHLMARKTVVEEGGVSVISSLLGPFTSHA--------VGSEVVAILVSLDLDSDSKSGLM 228
Query: 251 ETPMVIPLLMDALRSGTIETRSNAA 275
+ P + L++D L G+ ET+ N A
Sbjct: 229 Q-PAKVSLIVDMLNDGSNETKINCA 252
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 132
P+EF CP+++E+M+DPVI A G +++R I+ W+ NRT P T L T+LTPN ++
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 133 EMISQWCRSQ 142
I +W SQ
Sbjct: 478 MAIFRWSTSQ 487
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 73 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTIL-TPNHLI 131
P++F CP++ ++ DPV L +GQT++R IQ WL GN TCP T+Q LS IL N+++
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVL 573
Query: 132 REMISQWCRSQGIEL 146
+ +I W + Q EL
Sbjct: 574 KRLIVSW-KEQNPEL 587
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 36 DYRTETIDQARDTLCALKELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQ 95
D + E++ L ++ EL+T+ SLS + P+EF CP+++ELM+DPVI + G
Sbjct: 374 DMKIESLGLRSKVLRSIDELRTRMESLSSGI------PDEFICPITRELMKDPVIASDGY 427
Query: 96 TFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQW 138
+++R ++ W+ RT P T L +LTPN ++ I++W
Sbjct: 428 SYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAINRW 470
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 74 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 133
E+FKCP+S E+MRDP + A G T++ ++WL++G RT P+T + L + L PNH +R
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 134 MISQW 138
+I W
Sbjct: 295 IIKDW 299
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 36 DYRTETIDQARDTLCALKELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQ 95
D + E++ L +++EL+ K SLS + P+EF CP+++ELM+DPVI + G
Sbjct: 372 DLKIESLGLRSKVLRSIEELRAKMDSLSSGI------PDEFICPITRELMKDPVIASDGY 425
Query: 96 TFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQW 138
+++R ++ W+ RT P T L +LTPN ++ I++W
Sbjct: 426 SYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAINRW 468
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,598,616
Number of Sequences: 539616
Number of extensions: 6386712
Number of successful extensions: 19860
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 19287
Number of HSP's gapped (non-prelim): 366
length of query: 456
length of database: 191,569,459
effective HSP length: 121
effective length of query: 335
effective length of database: 126,275,923
effective search space: 42302434205
effective search space used: 42302434205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)