Query 012815
Match_columns 456
No_of_seqs 215 out of 1706
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 16:46:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eoo_A Methylisocitrate lyase; 100.0 2.9E-74 1E-78 574.2 31.9 287 74-364 7-295 (298)
2 3fa4_A 2,3-dimethylmalate lyas 100.0 6.5E-74 2.2E-78 572.4 33.6 288 75-363 3-292 (302)
3 3lye_A Oxaloacetate acetyl hyd 100.0 5.6E-74 1.9E-78 574.1 33.1 295 68-363 2-300 (307)
4 3ih1_A Methylisocitrate lyase; 100.0 1.6E-71 5.6E-76 555.9 31.8 283 75-364 15-299 (305)
5 1zlp_A PSR132, petal death pro 100.0 6.1E-71 2.1E-75 554.5 31.5 285 74-362 24-311 (318)
6 1xg4_A Probable methylisocitra 100.0 5.1E-70 1.7E-74 543.1 32.1 283 76-362 4-289 (295)
7 3eol_A Isocitrate lyase; seatt 100.0 6E-71 2.1E-75 571.1 23.5 282 47-331 10-368 (433)
8 3lg3_A Isocitrate lyase; conse 100.0 1.2E-70 4.1E-75 568.2 24.8 291 37-330 1-372 (435)
9 2hjp_A Phosphonopyruvate hydro 100.0 4E-69 1.4E-73 535.5 32.9 281 75-362 1-289 (290)
10 3b8i_A PA4872 oxaloacetate dec 100.0 3E-69 1E-73 535.7 30.9 277 76-364 8-285 (287)
11 3i4e_A Isocitrate lyase; struc 100.0 8.6E-70 2.9E-74 562.8 25.1 289 40-331 6-373 (439)
12 1f8m_A Isocitrate lyase, ICL; 100.0 1.4E-68 4.8E-73 553.7 26.1 286 43-331 9-369 (429)
13 1s2w_A Phosphoenolpyruvate pho 100.0 9.3E-68 3.2E-72 526.8 28.9 282 75-363 5-293 (295)
14 2ze3_A DFA0005; organic waste 100.0 6.1E-61 2.1E-65 473.7 26.7 260 76-350 5-274 (275)
15 2qiw_A PEP phosphonomutase; st 100.0 1.7E-57 5.8E-62 444.7 27.3 241 76-331 7-253 (255)
16 1dqu_A Isocitrate lyase; beta 100.0 2.2E-60 7.7E-65 502.5 6.7 279 44-331 14-353 (538)
17 3vav_A 3-methyl-2-oxobutanoate 100.0 6.6E-40 2.3E-44 323.2 16.7 234 77-336 17-271 (275)
18 1m3u_A 3-methyl-2-oxobutanoate 100.0 1.1E-36 3.6E-41 299.0 19.5 230 77-337 5-260 (264)
19 1o66_A 3-methyl-2-oxobutanoate 100.0 2E-35 6.8E-40 291.3 20.6 228 77-337 5-260 (275)
20 1oy0_A Ketopantoate hydroxymet 100.0 6.4E-35 2.2E-39 288.5 19.4 229 76-337 21-278 (281)
21 2p10_A MLL9387 protein; putati 98.2 0.00017 5.8E-09 71.5 21.7 224 78-330 17-280 (286)
22 1h5y_A HISF; histidine biosynt 98.1 7.8E-05 2.7E-09 69.3 14.7 174 101-316 38-233 (253)
23 1thf_D HISF protein; thermophI 97.9 0.00016 5.6E-09 68.2 13.2 191 102-333 36-246 (253)
24 1ka9_F Imidazole glycerol phos 97.8 0.00029 9.8E-09 66.5 13.2 176 101-316 36-231 (252)
25 3igs_A N-acetylmannosamine-6-p 97.7 0.0027 9.3E-08 60.6 19.5 199 75-328 4-227 (232)
26 2yxg_A DHDPS, dihydrodipicolin 97.7 0.00062 2.1E-08 66.9 14.8 122 163-302 19-150 (289)
27 2ehh_A DHDPS, dihydrodipicolin 97.7 0.00064 2.2E-08 66.9 14.9 122 163-302 19-150 (294)
28 3q58_A N-acetylmannosamine-6-p 97.7 0.0023 7.9E-08 61.0 18.1 196 76-326 5-225 (229)
29 3cpr_A Dihydrodipicolinate syn 97.6 0.0011 3.6E-08 65.7 15.5 122 163-302 35-166 (304)
30 3l21_A DHDPS, dihydrodipicolin 97.6 0.00089 3E-08 66.4 14.8 122 163-302 34-165 (304)
31 3a5f_A Dihydrodipicolinate syn 97.6 0.00035 1.2E-08 68.7 11.7 124 160-302 18-151 (291)
32 1xky_A Dihydrodipicolinate syn 97.6 0.001 3.5E-08 65.8 15.0 122 163-302 31-162 (301)
33 3m5v_A DHDPS, dihydrodipicolin 97.6 0.00046 1.6E-08 68.2 12.2 104 163-281 26-138 (301)
34 2w6r_A Imidazole glycerol phos 97.6 0.00068 2.3E-08 64.5 12.8 180 101-317 35-236 (266)
35 2tps_A Protein (thiamin phosph 97.6 0.012 4.1E-07 54.3 20.9 155 101-315 36-205 (227)
36 2ekc_A AQ_1548, tryptophan syn 97.6 0.0075 2.6E-07 58.3 20.3 211 79-330 6-258 (262)
37 1jub_A Dihydroorotate dehydrog 97.6 0.0044 1.5E-07 60.6 18.7 205 91-315 16-276 (311)
38 2ojp_A DHDPS, dihydrodipicolin 97.6 0.00057 1.9E-08 67.2 12.3 122 163-302 20-151 (292)
39 2rfg_A Dihydrodipicolinate syn 97.6 0.00075 2.6E-08 66.6 13.2 122 163-302 19-150 (297)
40 2vc6_A MOSA, dihydrodipicolina 97.5 0.0008 2.7E-08 66.1 13.2 122 163-302 19-150 (292)
41 2r8w_A AGR_C_1641P; APC7498, d 97.5 0.0014 4.9E-08 65.8 15.1 122 163-302 53-184 (332)
42 3flu_A DHDPS, dihydrodipicolin 97.5 0.00062 2.1E-08 67.2 12.2 122 163-302 26-157 (297)
43 1o5k_A DHDPS, dihydrodipicolin 97.5 0.00051 1.7E-08 68.1 11.6 122 163-302 31-162 (306)
44 2wkj_A N-acetylneuraminate lya 97.5 0.0014 4.9E-08 64.8 14.9 123 163-302 30-162 (303)
45 1f6k_A N-acetylneuraminate lya 97.5 0.0012 4E-08 65.0 14.1 122 163-302 22-154 (293)
46 3qfe_A Putative dihydrodipicol 97.5 0.00085 2.9E-08 67.0 13.2 120 163-299 30-161 (318)
47 2v9d_A YAGE; dihydrodipicolini 97.5 0.0011 3.9E-08 66.8 14.2 122 163-302 50-181 (343)
48 3e96_A Dihydrodipicolinate syn 97.5 0.00098 3.3E-08 66.4 13.3 118 163-302 31-157 (316)
49 3daq_A DHDPS, dihydrodipicolin 97.5 0.0004 1.4E-08 68.4 10.2 104 163-281 21-132 (292)
50 2e6f_A Dihydroorotate dehydrog 97.5 0.0067 2.3E-07 59.3 18.8 204 91-315 18-278 (314)
51 3tdn_A FLR symmetric alpha-bet 97.5 0.00021 7.1E-09 67.8 7.7 175 101-315 40-234 (247)
52 3eb2_A Putative dihydrodipicol 97.5 0.00063 2.2E-08 67.3 11.4 123 163-302 23-154 (300)
53 3b4u_A Dihydrodipicolinate syn 97.5 0.0014 4.7E-08 64.6 13.8 123 163-302 22-157 (294)
54 2nuw_A 2-keto-3-deoxygluconate 97.4 0.0019 6.5E-08 63.4 14.3 119 163-302 18-147 (288)
55 3tak_A DHDPS, dihydrodipicolin 97.4 0.00089 3E-08 65.8 11.9 122 163-302 20-151 (291)
56 3qze_A DHDPS, dihydrodipicolin 97.4 0.00071 2.4E-08 67.4 11.2 122 163-302 42-173 (314)
57 1rd5_A Tryptophan synthase alp 97.4 0.012 4.1E-07 56.2 19.1 202 78-317 6-237 (262)
58 2r91_A 2-keto-3-deoxy-(6-phosp 97.4 0.0023 7.9E-08 62.7 14.4 118 163-301 17-145 (286)
59 3fkr_A L-2-keto-3-deoxyarabona 97.4 0.0016 5.3E-08 64.8 13.3 122 163-302 27-160 (309)
60 1vzw_A Phosphoribosyl isomeras 97.4 0.0016 5.6E-08 61.1 12.8 175 101-316 37-228 (244)
61 1yxy_A Putative N-acetylmannos 97.4 0.014 4.6E-07 54.6 18.8 165 101-315 41-220 (234)
62 3na8_A Putative dihydrodipicol 97.4 0.0008 2.7E-08 67.1 10.9 122 163-302 43-174 (315)
63 3si9_A DHDPS, dihydrodipicolin 97.4 0.001 3.4E-08 66.4 11.5 104 163-281 41-152 (315)
64 3d0c_A Dihydrodipicolinate syn 97.4 0.0021 7.3E-08 63.9 13.8 118 163-302 31-157 (314)
65 2y88_A Phosphoribosyl isomeras 97.4 0.0026 8.9E-08 59.5 13.6 175 101-316 36-231 (244)
66 1qop_A Tryptophan synthase alp 97.4 0.016 5.5E-07 56.0 19.5 196 78-317 5-241 (268)
67 3s5o_A 4-hydroxy-2-oxoglutarat 97.3 0.00089 3.1E-08 66.4 10.3 122 163-302 33-166 (307)
68 1w3i_A EDA, 2-keto-3-deoxy glu 97.3 0.0031 1E-07 62.1 13.8 118 163-301 18-146 (293)
69 4dpp_A DHDPS 2, dihydrodipicol 97.3 0.0026 9E-08 64.9 13.6 123 163-302 78-207 (360)
70 1gte_A Dihydropyrimidine dehyd 97.2 0.022 7.6E-07 64.7 21.4 205 96-315 554-821 (1025)
71 3f4w_A Putative hexulose 6 pho 97.2 0.015 5E-07 53.3 16.3 143 140-316 42-193 (211)
72 4adt_A Pyridoxine biosynthetic 97.2 0.027 9.2E-07 56.0 19.2 88 80-183 15-105 (297)
73 1y0e_A Putative N-acetylmannos 97.1 0.0089 3E-07 55.2 14.5 165 101-315 28-209 (223)
74 3h5d_A DHDPS, dihydrodipicolin 97.1 0.0019 6.4E-08 64.3 10.5 104 163-281 26-138 (311)
75 3dz1_A Dihydrodipicolinate syn 97.1 0.002 7E-08 64.0 10.8 104 163-281 27-138 (313)
76 1xi3_A Thiamine phosphate pyro 97.1 0.05 1.7E-06 49.4 19.3 151 101-315 31-195 (215)
77 3vnd_A TSA, tryptophan synthas 97.1 0.032 1.1E-06 54.6 18.9 199 78-317 6-242 (267)
78 1qo2_A Molecule: N-((5-phospho 97.1 0.0035 1.2E-07 59.0 11.6 173 101-316 35-229 (241)
79 2f6u_A GGGPS, (S)-3-O-geranylg 97.1 0.00059 2E-08 65.8 5.7 181 102-322 26-230 (234)
80 3nav_A Tryptophan synthase alp 97.0 0.1 3.5E-06 51.1 21.7 199 78-317 8-244 (271)
81 1ujp_A Tryptophan synthase alp 97.0 0.018 6.3E-07 56.2 16.3 196 80-317 6-236 (271)
82 2qjg_A Putative aldolase MJ040 97.0 0.013 4.4E-07 56.0 14.9 180 95-316 43-243 (273)
83 1vyr_A Pentaerythritol tetrani 97.0 0.018 6.2E-07 58.3 16.3 152 165-332 161-340 (364)
84 1z41_A YQJM, probable NADH-dep 97.0 0.039 1.3E-06 55.0 18.4 197 109-316 52-313 (338)
85 3b0p_A TRNA-dihydrouridine syn 97.0 0.0087 3E-07 60.3 13.6 197 95-315 13-230 (350)
86 2r14_A Morphinone reductase; H 96.9 0.026 8.8E-07 57.6 16.9 152 165-332 166-345 (377)
87 1mdl_A Mandelate racemase; iso 96.8 0.044 1.5E-06 54.6 17.4 136 150-315 133-275 (359)
88 1p0k_A Isopentenyl-diphosphate 96.8 0.081 2.8E-06 52.7 19.2 186 98-317 75-287 (349)
89 2hmc_A AGR_L_411P, dihydrodipi 96.8 0.018 6.2E-07 58.1 14.5 118 163-302 45-174 (344)
90 1f76_A Dihydroorotate dehydrog 96.8 0.13 4.6E-06 50.7 20.6 200 101-315 70-323 (336)
91 2z6i_A Trans-2-enoyl-ACP reduc 96.8 0.069 2.4E-06 53.0 18.5 182 80-316 4-197 (332)
92 1wv2_A Thiazole moeity, thiazo 96.8 0.017 5.7E-07 56.8 13.3 173 19-219 64-240 (265)
93 1gvf_A Tagatose-bisphosphate a 96.7 0.2 6.9E-06 49.6 21.0 209 78-326 7-248 (286)
94 4ef8_A Dihydroorotate dehydrog 96.7 0.058 2E-06 54.8 17.6 165 133-316 109-312 (354)
95 1viz_A PCRB protein homolog; s 96.7 0.0086 2.9E-07 57.9 10.7 187 102-330 26-229 (240)
96 2v82_A 2-dehydro-3-deoxy-6-pho 96.7 0.051 1.8E-06 49.9 15.5 155 102-316 25-182 (212)
97 2zad_A Muconate cycloisomerase 96.7 0.017 5.9E-07 57.3 12.9 124 160-311 136-266 (345)
98 1ps9_A 2,4-dienoyl-COA reducta 96.6 0.058 2E-06 58.1 17.8 211 108-332 49-327 (671)
99 2gou_A Oxidoreductase, FMN-bin 96.6 0.042 1.4E-06 55.6 15.6 152 165-332 161-339 (365)
100 3hgj_A Chromate reductase; TIM 96.6 0.03 1E-06 56.3 14.2 140 167-315 154-323 (349)
101 2p8b_A Mandelate racemase/muco 96.6 0.045 1.5E-06 54.7 15.3 127 160-315 138-272 (369)
102 3ru6_A Orotidine 5'-phosphate 96.6 0.051 1.8E-06 54.3 15.5 159 143-329 69-251 (303)
103 2rdx_A Mandelate racemase/muco 96.5 0.041 1.4E-06 55.4 15.0 124 160-313 142-270 (379)
104 2yzr_A Pyridoxal biosynthesis 96.5 0.12 4.2E-06 52.2 18.0 89 80-183 11-101 (330)
105 2fiq_A Putative tagatose 6-pho 96.5 0.26 8.8E-06 51.3 21.0 226 85-325 8-296 (420)
106 3sz8_A 2-dehydro-3-deoxyphosph 96.5 0.02 6.7E-07 56.8 12.1 145 76-222 78-277 (285)
107 2nv1_A Pyridoxal biosynthesis 96.5 0.12 4E-06 50.7 17.6 178 91-315 24-243 (305)
108 1geq_A Tryptophan synthase alp 96.5 0.04 1.4E-06 51.7 13.6 148 133-316 63-226 (248)
109 1to3_A Putative aldolase YIHT; 96.5 0.071 2.4E-06 52.9 15.8 133 169-316 112-260 (304)
110 1tkk_A Similar to chloromucona 96.4 0.044 1.5E-06 54.7 14.4 129 160-314 137-272 (366)
111 2oz8_A MLL7089 protein; struct 96.4 0.075 2.6E-06 53.8 16.0 138 151-318 133-280 (389)
112 3tfx_A Orotidine 5'-phosphate 96.4 0.065 2.2E-06 52.3 14.7 152 150-329 56-237 (259)
113 3nvt_A 3-deoxy-D-arabino-heptu 96.4 0.021 7.2E-07 58.7 11.6 140 76-217 193-377 (385)
114 1rvk_A Isomerase/lactonizing e 96.3 0.18 6.2E-06 50.6 18.2 131 162-314 148-286 (382)
115 2ovl_A Putative racemase; stru 96.3 0.12 4E-06 51.9 16.4 133 151-313 134-275 (371)
116 2ps2_A Putative mandelate race 96.3 0.072 2.5E-06 53.3 14.8 124 161-314 144-273 (371)
117 3m47_A Orotidine 5'-phosphate 96.2 0.078 2.7E-06 50.3 13.8 185 91-316 16-208 (228)
118 3o63_A Probable thiamine-phosp 96.2 0.23 7.9E-06 47.7 17.2 134 133-315 76-224 (243)
119 3q94_A Fructose-bisphosphate a 96.2 1.1 3.7E-05 44.4 22.4 209 78-326 10-252 (288)
120 1jvn_A Glutamine, bifunctional 96.2 0.05 1.7E-06 58.1 13.8 193 101-316 285-532 (555)
121 1zco_A 2-dehydro-3-deoxyphosph 96.2 0.088 3E-06 51.2 14.4 141 75-217 73-258 (262)
122 3zwt_A Dihydroorotate dehydrog 96.2 0.24 8.1E-06 50.4 18.2 167 134-315 124-332 (367)
123 3bo9_A Putative nitroalkan dio 96.2 0.26 8.8E-06 48.9 18.0 199 75-328 13-227 (326)
124 2qde_A Mandelate racemase/muco 96.2 0.037 1.3E-06 56.2 12.1 125 160-313 142-273 (397)
125 1icp_A OPR1, 12-oxophytodienoa 96.1 0.097 3.3E-06 53.3 14.8 152 165-332 167-347 (376)
126 2zbt_A Pyridoxal biosynthesis 96.0 0.34 1.2E-05 46.9 17.8 77 95-182 27-104 (297)
127 2og9_A Mandelate racemase/muco 96.0 0.15 5.2E-06 51.6 15.8 123 163-313 162-291 (393)
128 3bjs_A Mandelate racemase/muco 96.0 0.058 2E-06 55.6 12.9 131 150-311 171-312 (428)
129 3o07_A Pyridoxine biosynthesis 96.0 0.3 1E-05 48.5 17.3 80 92-182 14-94 (291)
130 3r0u_A Enzyme of enolase super 95.9 0.33 1.1E-05 49.2 17.8 128 159-313 138-272 (379)
131 3sr7_A Isopentenyl-diphosphate 95.9 0.069 2.3E-06 54.5 12.6 85 95-186 152-238 (365)
132 1o66_A 3-methyl-2-oxobutanoate 95.9 0.11 3.6E-06 51.4 13.4 106 169-281 28-135 (275)
133 2pcq_A Putative dihydrodipicol 95.9 0.0064 2.2E-07 59.5 4.7 115 163-302 17-142 (283)
134 4e5t_A Mandelate racemase / mu 95.9 0.12 4E-06 52.9 14.3 137 159-312 147-291 (404)
135 2pgw_A Muconate cycloisomerase 95.9 0.17 5.9E-06 50.9 15.3 127 162-318 146-279 (384)
136 3gr7_A NADPH dehydrogenase; fl 95.9 0.098 3.3E-06 52.5 13.4 138 167-315 146-312 (340)
137 3khj_A Inosine-5-monophosphate 95.9 0.3 1E-05 49.5 17.1 145 132-314 77-240 (361)
138 1nu5_A Chloromuconate cycloiso 95.8 0.075 2.6E-06 53.1 12.5 126 160-313 139-272 (370)
139 1rvg_A Fructose-1,6-bisphospha 95.8 1.7 5.7E-05 43.4 22.0 210 79-326 7-269 (305)
140 2nwr_A 2-dehydro-3-deoxyphosph 95.8 0.053 1.8E-06 53.1 11.1 136 77-215 63-251 (267)
141 3l5l_A Xenobiotic reductase A; 95.8 0.072 2.5E-06 53.8 12.3 140 167-315 160-330 (363)
142 1dqu_A Isocitrate lyase; beta 95.8 0.035 1.2E-06 59.4 10.2 93 237-330 373-477 (538)
143 3ozy_A Putative mandelate race 95.7 0.12 4.1E-06 52.5 13.6 132 151-312 139-279 (389)
144 1jub_A Dihydroorotate dehydrog 95.7 0.051 1.7E-06 53.0 10.5 156 100-273 110-287 (311)
145 2pp0_A L-talarate/galactarate 95.7 0.24 8.2E-06 50.3 15.6 123 163-313 175-304 (398)
146 3tsm_A IGPS, indole-3-glycerol 95.7 0.31 1.1E-05 47.8 15.8 171 96-317 78-256 (272)
147 3eez_A Putative mandelate race 95.5 0.058 2E-06 54.6 10.5 129 160-318 142-275 (378)
148 3qja_A IGPS, indole-3-glycerol 95.5 0.15 5.2E-06 49.8 13.1 180 97-330 72-260 (272)
149 1xm3_A Thiazole biosynthesis p 95.5 0.076 2.6E-06 51.3 10.8 175 101-315 28-212 (264)
150 3fs2_A 2-dehydro-3-deoxyphosph 95.5 0.038 1.3E-06 55.1 8.8 140 76-217 99-294 (298)
151 3iwp_A Copper homeostasis prot 95.5 1.8 6.1E-05 42.9 20.6 182 90-308 40-236 (287)
152 3vav_A 3-methyl-2-oxobutanoate 95.5 0.11 3.9E-06 51.2 12.0 108 169-283 40-148 (275)
153 2qdd_A Mandelate racemase/muco 95.5 0.08 2.7E-06 53.2 11.3 126 160-315 142-272 (378)
154 1vs1_A 3-deoxy-7-phosphoheptul 95.5 0.067 2.3E-06 52.6 10.4 139 76-216 89-272 (276)
155 2czd_A Orotidine 5'-phosphate 95.5 0.25 8.5E-06 45.6 13.7 142 145-316 46-191 (208)
156 1ep3_A Dihydroorotate dehydrog 95.5 0.25 8.6E-06 47.6 14.3 161 134-315 80-275 (311)
157 1vr6_A Phospho-2-dehydro-3-deo 95.4 0.093 3.2E-06 53.4 11.5 145 76-222 157-346 (350)
158 1ypf_A GMP reductase; GUAC, pu 95.4 0.5 1.7E-05 47.0 16.7 132 149-314 93-243 (336)
159 2qgy_A Enolase from the enviro 95.4 0.21 7.2E-06 50.5 14.1 123 162-312 148-277 (391)
160 3kru_A NADH:flavin oxidoreduct 95.4 0.67 2.3E-05 46.6 17.5 197 109-315 50-312 (343)
161 2nli_A Lactate oxidase; flavoe 95.4 0.76 2.6E-05 46.6 18.0 105 244-362 241-359 (368)
162 1z41_A YQJM, probable NADH-dep 95.3 0.24 8.1E-06 49.4 13.8 159 100-276 148-325 (338)
163 1m3u_A 3-methyl-2-oxobutanoate 95.3 0.14 4.8E-06 50.2 11.7 106 169-281 28-134 (264)
164 1h7n_A 5-aminolaevulinic acid 95.2 0.56 1.9E-05 47.4 16.1 170 92-283 59-287 (342)
165 3gd6_A Muconate cycloisomerase 95.2 0.1 3.6E-06 53.0 11.2 126 162-315 141-273 (391)
166 4fo4_A Inosine 5'-monophosphat 95.2 0.5 1.7E-05 48.1 16.1 148 133-314 79-244 (366)
167 3sjn_A Mandelate racemase/muco 95.2 0.11 3.7E-06 52.5 11.1 100 165-283 148-251 (374)
168 2gjl_A Hypothetical protein PA 95.2 0.6 2.1E-05 45.9 16.2 183 80-316 7-207 (328)
169 3stp_A Galactonate dehydratase 95.2 0.72 2.5E-05 47.3 17.4 146 150-320 167-321 (412)
170 2hxt_A L-fuconate dehydratase; 95.2 0.37 1.3E-05 49.6 15.2 135 150-312 184-326 (441)
171 3i65_A Dihydroorotate dehydrog 95.1 0.55 1.9E-05 48.7 16.4 168 134-316 158-380 (415)
172 2e6f_A Dihydroorotate dehydrog 95.1 0.065 2.2E-06 52.3 8.9 84 100-187 110-197 (314)
173 4e4u_A Mandalate racemase/muco 95.1 0.35 1.2E-05 49.6 14.7 135 161-312 142-284 (412)
174 2nql_A AGR_PAT_674P, isomerase 95.0 0.14 4.7E-06 51.7 11.4 133 150-313 152-292 (388)
175 3gr7_A NADPH dehydrogenase; fl 95.0 0.3 1E-05 48.9 13.6 158 100-276 148-325 (340)
176 3vkj_A Isopentenyl-diphosphate 95.0 1 3.4E-05 45.8 17.5 81 97-186 135-219 (368)
177 3tml_A 2-dehydro-3-deoxyphosph 94.9 0.058 2E-06 53.5 8.1 141 76-218 75-277 (288)
178 3igs_A N-acetylmannosamine-6-p 94.9 0.17 5.9E-06 48.1 11.1 105 80-215 120-227 (232)
179 3ajx_A 3-hexulose-6-phosphate 94.9 0.32 1.1E-05 44.2 12.4 139 141-316 43-192 (207)
180 3r2g_A Inosine 5'-monophosphat 94.9 0.43 1.5E-05 48.6 14.5 166 95-314 52-232 (361)
181 3q58_A N-acetylmannosamine-6-p 94.9 0.19 6.5E-06 47.7 11.2 104 80-214 120-226 (229)
182 3jva_A Dipeptide epimerase; en 94.8 1.3 4.3E-05 44.2 17.6 133 160-321 136-275 (354)
183 3txv_A Probable tagatose 6-pho 94.8 0.82 2.8E-05 48.0 16.7 264 90-366 22-343 (450)
184 1f76_A Dihydroorotate dehydrog 94.8 0.3 1E-05 48.2 12.8 148 108-273 164-334 (336)
185 1y0e_A Putative N-acetylmannos 94.8 0.28 9.7E-06 45.0 11.8 85 89-184 119-203 (223)
186 2gdq_A YITF; mandelate racemas 94.8 0.15 5.2E-06 51.4 10.8 133 150-312 123-268 (382)
187 4dwd_A Mandelate racemase/muco 94.7 1.1 3.7E-05 45.6 17.1 142 150-313 125-274 (393)
188 2qkf_A 3-deoxy-D-manno-octulos 94.7 0.086 2.9E-06 51.9 8.5 138 77-216 74-266 (280)
189 3l5a_A NADH/flavin oxidoreduct 94.7 0.37 1.3E-05 49.9 13.5 155 167-332 172-363 (419)
190 1tzz_A Hypothetical protein L1 94.6 0.26 8.8E-06 49.8 12.1 122 163-312 165-297 (392)
191 1wv2_A Thiazole moeity, thiazo 94.6 1.1 3.8E-05 43.9 16.1 129 160-315 82-221 (265)
192 1o60_A 2-dehydro-3-deoxyphosph 94.6 0.073 2.5E-06 52.7 7.8 138 76-215 76-268 (292)
193 3aty_A Tcoye, prostaglandin F2 94.5 0.42 1.5E-05 48.7 13.5 150 166-332 175-353 (379)
194 3toy_A Mandelate racemase/muco 94.5 0.52 1.8E-05 47.8 14.1 133 150-312 156-296 (383)
195 2qq6_A Mandelate racemase/muco 94.5 0.34 1.2E-05 49.2 12.7 133 163-313 149-294 (410)
196 3pm6_A Putative fructose-bisph 94.4 4.5 0.00015 40.4 21.5 214 75-325 13-266 (306)
197 4ab4_A Xenobiotic reductase B; 94.4 0.24 8.2E-06 50.3 11.3 150 167-332 155-325 (362)
198 2htm_A Thiazole biosynthesis p 94.3 0.11 3.7E-06 51.1 8.2 114 79-219 115-231 (268)
199 3sgz_A Hydroxyacid oxidase 2; 94.3 1.1 3.8E-05 45.5 15.8 83 244-330 229-325 (352)
200 2poz_A Putative dehydratase; o 94.3 0.37 1.3E-05 48.6 12.4 127 163-311 137-281 (392)
201 2hsa_B 12-oxophytodienoate red 94.2 1 3.5E-05 46.2 15.7 152 165-332 171-365 (402)
202 3qw3_A Orotidine-5-phosphate d 94.2 2.1 7.2E-05 41.4 17.1 138 149-315 75-233 (255)
203 1ydn_A Hydroxymethylglutaryl-C 94.2 0.27 9.2E-06 47.8 10.8 154 102-274 32-192 (295)
204 1pv8_A Delta-aminolevulinic ac 94.2 0.64 2.2E-05 46.8 13.5 157 105-284 68-277 (330)
205 2o56_A Putative mandelate race 94.2 0.68 2.3E-05 46.8 14.1 134 163-312 152-298 (407)
206 1yad_A Regulatory protein TENI 94.1 2.8 9.6E-05 38.4 17.0 132 133-315 53-197 (221)
207 3iwp_A Copper homeostasis prot 94.0 0.2 6.7E-06 49.8 9.4 130 169-312 50-188 (287)
208 2ox4_A Putative mandelate race 94.0 0.58 2E-05 47.3 13.2 140 163-318 146-298 (403)
209 3gka_A N-ethylmaleimide reduct 94.0 0.27 9.3E-06 49.9 10.6 151 166-332 162-333 (361)
210 3ik4_A Mandelate racemase/muco 94.0 0.6 2E-05 46.9 13.1 127 160-313 140-273 (365)
211 3rcy_A Mandelate racemase/muco 93.9 0.88 3E-05 47.0 14.6 137 161-314 144-288 (433)
212 1w8s_A FBP aldolase, fructose- 93.9 2.6 8.9E-05 40.5 17.0 131 169-316 96-237 (263)
213 2h6r_A Triosephosphate isomera 93.8 0.63 2.1E-05 43.6 12.2 140 143-316 46-205 (219)
214 1mzh_A Deoxyribose-phosphate a 93.8 0.69 2.3E-05 43.5 12.4 139 155-310 60-204 (225)
215 3rr1_A GALD, putative D-galact 93.8 0.72 2.5E-05 47.2 13.5 142 150-313 114-262 (405)
216 3ffs_A Inosine-5-monophosphate 93.8 0.54 1.9E-05 48.5 12.6 98 78-184 173-274 (400)
217 3hgj_A Chromate reductase; TIM 93.8 0.91 3.1E-05 45.4 14.0 158 100-276 156-336 (349)
218 4dbe_A Orotidine 5'-phosphate 93.8 1 3.4E-05 42.7 13.5 152 149-328 51-207 (222)
219 2ftp_A Hydroxymethylglutaryl-C 93.8 1.4 4.9E-05 43.0 15.1 151 102-274 36-196 (302)
220 2hzg_A Mandelate racemase/muco 93.7 0.45 1.6E-05 48.2 11.8 137 150-314 133-281 (401)
221 1wa3_A 2-keto-3-deoxy-6-phosph 93.7 1.1 3.7E-05 40.6 13.3 65 246-315 117-183 (205)
222 2gl5_A Putative dehydratase pr 93.7 0.7 2.4E-05 46.8 13.1 136 163-312 150-301 (410)
223 3mqt_A Mandelate racemase/muco 93.6 0.78 2.7E-05 46.5 13.4 99 166-282 155-257 (394)
224 4e8g_A Enolase, mandelate race 93.6 0.66 2.3E-05 47.2 12.8 125 160-313 161-291 (391)
225 3vzx_A Heptaprenylglyceryl pho 93.6 1.1 3.9E-05 42.8 13.7 184 105-329 27-226 (228)
226 4ef8_A Dihydroorotate dehydrog 93.6 0.32 1.1E-05 49.3 10.3 142 101-260 144-306 (354)
227 3kru_A NADH:flavin oxidoreduct 93.5 2.2 7.6E-05 42.8 16.3 138 100-260 147-307 (343)
228 3b0p_A TRNA-dihydrouridine syn 93.5 0.48 1.6E-05 47.5 11.4 88 101-188 75-167 (350)
229 4fo4_A Inosine 5'-monophosphat 93.5 0.25 8.5E-06 50.3 9.3 99 80-186 139-241 (366)
230 1gox_A (S)-2-hydroxy-acid oxid 93.4 4 0.00014 41.1 18.1 69 244-316 237-315 (370)
231 4fxs_A Inosine-5'-monophosphat 93.4 0.2 6.7E-06 52.8 8.7 119 166-314 231-367 (496)
232 3khj_A Inosine-5-monophosphate 93.4 0.32 1.1E-05 49.3 10.0 100 79-185 135-236 (361)
233 3tj4_A Mandelate racemase; eno 93.4 3.3 0.00011 41.5 17.4 122 163-312 151-280 (372)
234 4h2h_A Mandelate racemase/muco 93.4 0.79 2.7E-05 46.1 12.8 102 160-282 147-249 (376)
235 1vhn_A Putative flavin oxidore 93.3 0.17 5.7E-06 49.9 7.6 193 95-315 14-218 (318)
236 2nli_A Lactate oxidase; flavoe 93.3 0.28 9.6E-06 49.8 9.3 89 81-184 221-312 (368)
237 3bw2_A 2-nitropropane dioxygen 93.3 0.97 3.3E-05 45.3 13.2 111 168-315 112-242 (369)
238 3i4k_A Muconate lactonizing en 93.3 0.93 3.2E-05 45.8 13.1 126 160-313 145-278 (383)
239 3n9r_A Fructose-bisphosphate a 93.2 7.5 0.00026 38.8 21.0 212 79-327 7-272 (307)
240 1jcn_A Inosine monophosphate d 93.2 0.52 1.8E-05 49.3 11.5 101 79-187 285-389 (514)
241 1h1y_A D-ribulose-5-phosphate 93.2 1.4 5E-05 40.9 13.4 169 103-316 26-207 (228)
242 3go2_A Putative L-alanine-DL-g 93.2 1.6 5.5E-05 44.5 14.8 138 161-312 141-294 (409)
243 3sgz_A Hydroxyacid oxidase 2; 93.1 0.32 1.1E-05 49.5 9.4 82 88-184 217-300 (352)
244 3oix_A Putative dihydroorotate 93.1 3.4 0.00012 41.6 16.9 162 133-316 110-310 (345)
245 1vrd_A Inosine-5'-monophosphat 93.1 0.31 1.1E-05 50.7 9.5 90 88-184 278-368 (494)
246 3ugv_A Enolase; enzyme functio 92.9 3.6 0.00012 41.7 16.9 126 162-315 170-305 (390)
247 4avf_A Inosine-5'-monophosphat 92.9 0.49 1.7E-05 49.7 10.8 119 166-313 229-364 (490)
248 1ypf_A GMP reductase; GUAC, pu 92.9 0.28 9.5E-06 48.9 8.6 95 79-186 138-240 (336)
249 1vc4_A Indole-3-glycerol phosp 92.8 1.2 4E-05 42.9 12.6 167 97-316 65-242 (254)
250 1twd_A Copper homeostasis prot 92.8 7.6 0.00026 37.8 21.5 177 94-308 6-196 (256)
251 3zwt_A Dihydroorotate dehydrog 92.8 0.83 2.9E-05 46.4 12.0 99 149-260 219-327 (367)
252 3fv9_G Mandelate racemase/muco 92.8 0.55 1.9E-05 47.6 10.7 139 150-314 134-277 (386)
253 2c6q_A GMP reductase 2; TIM ba 92.8 0.32 1.1E-05 49.1 8.8 100 79-185 150-252 (351)
254 2bdq_A Copper homeostasis prot 92.7 3 0.0001 40.0 15.0 182 94-308 6-205 (224)
255 1eep_A Inosine 5'-monophosphat 92.7 0.22 7.5E-06 50.7 7.6 85 88-184 194-284 (404)
256 1rd5_A Tryptophan synthase alp 92.7 1.3 4.4E-05 42.0 12.5 96 151-263 21-128 (262)
257 3vc5_A Mandelate racemase/muco 92.6 1.6 5.5E-05 45.2 14.2 99 162-283 187-287 (441)
258 3ffs_A Inosine-5-monophosphate 92.6 0.97 3.3E-05 46.6 12.3 134 93-261 140-276 (400)
259 3mkc_A Racemase; metabolic pro 92.6 1.4 4.9E-05 44.6 13.5 123 166-313 160-290 (394)
260 3ddm_A Putative mandelate race 92.6 0.94 3.2E-05 46.0 12.1 128 151-311 147-282 (392)
261 3q45_A Mandelate racemase/muco 92.6 0.95 3.3E-05 45.4 12.1 124 160-312 137-267 (368)
262 1lt8_A Betaine-homocysteine me 92.6 2.2 7.7E-05 44.0 15.0 145 163-311 52-217 (406)
263 1eix_A Orotidine 5'-monophosph 92.6 6.5 0.00022 37.2 17.2 146 143-316 59-227 (245)
264 3tr2_A Orotidine 5'-phosphate 92.5 3.5 0.00012 39.4 15.3 140 149-316 58-222 (239)
265 2ze3_A DFA0005; organic waste 92.5 0.57 2E-05 45.9 10.0 86 170-262 28-114 (275)
266 1oy0_A Ketopantoate hydroxymet 92.5 0.67 2.3E-05 45.8 10.5 106 169-281 45-153 (281)
267 2cw6_A Hydroxymethylglutaryl-C 92.4 0.58 2E-05 45.7 9.9 152 102-273 33-192 (298)
268 1dbt_A Orotidine 5'-phosphate 92.4 3.7 0.00013 38.6 15.3 146 143-316 48-220 (239)
269 3t6c_A RSPA, putative MAND fam 92.4 1.4 4.9E-05 45.5 13.3 145 151-313 145-324 (440)
270 3ro6_B Putative chloromuconate 92.4 0.55 1.9E-05 46.9 9.9 126 160-314 137-270 (356)
271 3dg3_A Muconate cycloisomerase 92.4 0.8 2.7E-05 45.9 11.1 126 160-313 136-269 (367)
272 1vhn_A Putative flavin oxidore 92.4 0.23 8E-06 48.9 7.1 149 101-274 76-229 (318)
273 3jr2_A Hexulose-6-phosphate sy 92.3 2.1 7.2E-05 39.5 13.2 143 140-317 48-201 (218)
274 1jcn_A Inosine monophosphate d 92.3 0.69 2.3E-05 48.4 10.9 118 167-315 256-392 (514)
275 3s5s_A Mandelate racemase/muco 92.2 4.4 0.00015 41.0 16.5 127 160-313 141-274 (389)
276 3ldv_A Orotidine 5'-phosphate 92.1 1.8 6.3E-05 41.9 13.0 141 150-316 78-240 (255)
277 1vhc_A Putative KHG/KDPG aldol 92.1 1.5 5.1E-05 41.5 12.1 172 83-316 12-191 (224)
278 3qw4_B UMP synthase; N-termina 92.1 2.2 7.5E-05 44.5 14.3 128 150-306 77-219 (453)
279 1o94_A Tmadh, trimethylamine d 92.0 2.9 9.8E-05 45.6 15.8 153 165-332 149-338 (729)
280 4hnl_A Mandelate racemase/muco 92.0 0.56 1.9E-05 47.9 9.6 148 150-311 142-303 (421)
281 2agk_A 1-(5-phosphoribosyl)-5- 91.9 0.11 3.9E-06 50.2 4.1 170 101-313 43-239 (260)
282 3r4e_A Mandelate racemase/muco 91.9 3.5 0.00012 42.2 15.5 150 150-313 132-304 (418)
283 3vcn_A Mannonate dehydratase; 91.9 2.8 9.6E-05 43.0 14.8 149 151-313 140-311 (425)
284 1tv5_A Dhodehase, dihydroorota 91.9 4.9 0.00017 41.9 16.7 198 105-315 111-407 (443)
285 3k30_A Histamine dehydrogenase 91.8 2.9 0.0001 45.0 15.5 154 165-333 156-342 (690)
286 2nzl_A Hydroxyacid oxidase 1; 91.8 0.77 2.6E-05 47.0 10.3 90 80-184 243-335 (392)
287 3l5l_A Xenobiotic reductase A; 91.8 1.7 5.9E-05 43.7 12.8 159 100-276 162-343 (363)
288 2nx9_A Oxaloacetate decarboxyl 91.8 5.7 0.0002 41.6 17.1 151 102-273 36-194 (464)
289 3oa3_A Aldolase; structural ge 91.8 2 6.8E-05 42.6 12.9 140 153-310 114-263 (288)
290 3p3b_A Mandelate racemase/muco 91.7 2.3 7.7E-05 43.0 13.7 125 165-309 150-284 (392)
291 4a35_A Mitochondrial enolase s 91.7 1.8 6E-05 44.9 13.1 133 150-312 187-331 (441)
292 3glc_A Aldolase LSRF; TIM barr 91.6 6.5 0.00022 38.8 16.5 145 150-315 105-262 (295)
293 3vdg_A Probable glucarate dehy 91.6 0.82 2.8E-05 47.5 10.5 121 162-309 192-315 (445)
294 3v3w_A Starvation sensing prot 91.6 6.2 0.00021 40.4 17.0 150 150-313 138-310 (424)
295 2isw_A Putative fructose-1,6-b 91.6 12 0.00042 37.5 21.5 212 78-326 7-271 (323)
296 3iv3_A Tagatose 1,6-diphosphat 91.6 2.6 8.8E-05 42.5 13.7 151 94-259 108-279 (332)
297 1l6s_A Porphobilinogen synthas 91.6 3.8 0.00013 41.1 14.6 166 92-283 48-269 (323)
298 3my9_A Muconate cycloisomerase 91.5 2.3 7.8E-05 42.7 13.4 126 160-313 143-275 (377)
299 3usb_A Inosine-5'-monophosphat 91.5 0.54 1.8E-05 49.7 9.1 87 89-185 298-388 (511)
300 1tqj_A Ribulose-phosphate 3-ep 91.5 0.85 2.9E-05 43.0 9.6 179 103-330 24-219 (230)
301 1ub3_A Aldolase protein; schif 91.5 1.1 3.7E-05 42.6 10.3 140 153-309 59-204 (220)
302 1ydo_A HMG-COA lyase; TIM-barr 91.4 1.7 6E-05 42.8 12.1 174 80-274 13-194 (307)
303 3va8_A Probable dehydratase; e 91.3 0.77 2.6E-05 47.7 9.9 121 162-309 190-313 (445)
304 4h1z_A Enolase Q92ZS5; dehydra 91.3 1.4 4.8E-05 45.0 11.8 98 163-282 188-288 (412)
305 1xm3_A Thiazole biosynthesis p 91.3 0.84 2.9E-05 43.9 9.6 92 78-185 116-207 (264)
306 3ble_A Citramalate synthase fr 91.3 1.8 6.1E-05 43.2 12.2 173 80-280 26-216 (337)
307 3usb_A Inosine-5'-monophosphat 91.3 0.54 1.8E-05 49.7 8.8 118 166-313 256-391 (511)
308 2yw3_A 4-hydroxy-2-oxoglutarat 91.1 2.6 8.7E-05 39.1 12.4 108 169-315 74-184 (207)
309 1vqt_A Orotidine 5'-phosphate 91.1 0.85 2.9E-05 42.7 9.1 137 142-316 51-198 (213)
310 1rqb_A Transcarboxylase 5S sub 91.1 7.9 0.00027 41.4 17.6 159 100-279 51-222 (539)
311 2pge_A MENC; OSBS, NYSGXRC, PS 91.1 1.2 4E-05 44.8 10.7 128 160-312 159-293 (377)
312 1rpx_A Protein (ribulose-phosp 91.0 1.3 4.4E-05 41.0 10.2 166 102-316 29-213 (230)
313 2gou_A Oxidoreductase, FMN-bin 91.0 5.3 0.00018 40.2 15.4 153 100-276 165-340 (365)
314 2ozt_A TLR1174 protein; struct 91.0 2.5 8.7E-05 41.7 12.9 101 163-282 116-220 (332)
315 1n7k_A Deoxyribose-phosphate a 91.0 7.5 0.00026 37.2 15.7 136 154-309 77-220 (234)
316 3ceu_A Thiamine phosphate pyro 90.9 6 0.0002 36.3 14.7 144 103-314 20-176 (210)
317 2nzl_A Hydroxyacid oxidase 1; 90.9 2.2 7.5E-05 43.6 12.7 70 244-317 264-343 (392)
318 3rmj_A 2-isopropylmalate synth 90.9 2.8 9.5E-05 42.6 13.3 153 102-276 40-200 (370)
319 1gte_A Dihydropyrimidine dehyd 90.9 1.7 5.8E-05 49.4 13.0 78 101-184 653-734 (1025)
320 2v82_A 2-dehydro-3-deoxy-6-pho 90.9 1.2 4.2E-05 40.5 9.8 76 90-188 102-179 (212)
321 3noy_A 4-hydroxy-3-methylbut-2 90.8 2.8 9.5E-05 42.9 13.1 145 103-287 53-214 (366)
322 3fcp_A L-Ala-D/L-Glu epimerase 90.8 1.3 4.6E-05 44.5 10.9 125 160-312 144-276 (381)
323 1nvm_A HOA, 4-hydroxy-2-oxoval 90.8 3.1 0.00011 41.4 13.4 150 102-280 36-197 (345)
324 1q6o_A Humps, 3-keto-L-gulonat 90.7 4.4 0.00015 37.2 13.5 137 142-316 47-197 (216)
325 1yad_A Regulatory protein TENI 90.6 0.54 1.8E-05 43.3 7.1 94 77-187 100-194 (221)
326 2htm_A Thiazole biosynthesis p 90.6 5.7 0.00019 39.0 14.6 196 90-326 15-228 (268)
327 1w1z_A Delta-aminolevulinic ac 90.5 4.2 0.00014 40.9 13.8 166 92-283 54-276 (328)
328 3tji_A Mandelate racemase/muco 90.5 2.2 7.7E-05 43.8 12.4 148 150-312 143-305 (422)
329 1kbi_A Cytochrome B2, L-LCR; f 90.5 1.1 3.6E-05 47.6 10.2 92 81-184 335-431 (511)
330 3nl6_A Thiamine biosynthetic b 90.4 11 0.00037 40.2 18.0 154 128-330 47-231 (540)
331 1sjd_A N-acylamino acid racema 90.4 0.94 3.2E-05 45.1 9.2 119 162-312 140-265 (368)
332 2gjl_A Hypothetical protein PA 90.3 2 6.7E-05 42.2 11.3 94 78-185 108-201 (328)
333 4ab4_A Xenobiotic reductase B; 90.3 5.3 0.00018 40.4 14.7 147 100-276 157-326 (362)
334 3r12_A Deoxyribose-phosphate a 90.3 2.1 7E-05 41.9 11.3 142 152-310 98-245 (260)
335 3elf_A Fructose-bisphosphate a 90.2 17 0.00059 36.8 19.9 222 80-327 12-293 (349)
336 1me8_A Inosine-5'-monophosphat 90.2 1.3 4.5E-05 46.4 10.6 88 89-184 285-380 (503)
337 1vyr_A Pentaerythritol tetrani 90.1 3.6 0.00012 41.5 13.3 153 100-276 165-341 (364)
338 1vrd_A Inosine-5'-monophosphat 90.1 2 6.9E-05 44.5 11.8 127 100-260 240-369 (494)
339 1o5k_A DHDPS, dihydrodipicolin 90.1 4.9 0.00017 39.4 14.0 170 63-274 50-235 (306)
340 1p4c_A L(+)-mandelate dehydrog 90.1 0.47 1.6E-05 48.2 6.8 91 79-184 215-306 (380)
341 4af0_A Inosine-5'-monophosphat 90.1 1.1 3.8E-05 48.1 9.8 91 89-186 323-414 (556)
342 3l0g_A Nicotinate-nucleotide p 90.1 1.2 4.1E-05 44.4 9.5 62 245-311 219-280 (300)
343 1mzh_A Deoxyribose-phosphate a 90.0 5.5 0.00019 37.3 13.7 127 100-259 74-203 (225)
344 3u9i_A Mandelate racemase/muco 90.0 0.81 2.8E-05 46.6 8.5 135 160-313 162-303 (393)
345 2ztj_A Homocitrate synthase; ( 90.0 10 0.00035 38.4 16.6 144 102-273 31-180 (382)
346 3tqv_A Nicotinate-nucleotide p 90.0 1.6 5.5E-05 43.2 10.3 62 245-312 210-272 (287)
347 4e38_A Keto-hydroxyglutarate-a 89.9 1.1 3.7E-05 43.0 8.8 114 151-309 37-153 (232)
348 4avf_A Inosine-5'-monophosphat 89.9 1.2 4E-05 46.8 9.8 100 79-185 259-361 (490)
349 1w5q_A Delta-aminolevulinic ac 89.8 7.3 0.00025 39.3 14.9 168 92-283 56-283 (337)
350 3dip_A Enolase; structural gen 89.8 3.8 0.00013 41.8 13.3 126 168-311 161-296 (410)
351 1twd_A Copper homeostasis prot 89.8 1.2 4.1E-05 43.5 9.0 128 170-311 13-149 (256)
352 3bw2_A 2-nitropropane dioxygen 89.7 1.5 5.1E-05 43.9 10.1 97 78-185 135-237 (369)
353 3o63_A Probable thiamine-phosp 89.7 0.62 2.1E-05 44.7 7.0 104 69-187 116-221 (243)
354 1p0k_A Isopentenyl-diphosphate 89.7 1.7 5.8E-05 43.1 10.4 95 80-184 169-279 (349)
355 2ekc_A AQ_1548, tryptophan syn 89.7 4.6 0.00016 38.6 13.1 112 149-273 18-141 (262)
356 4fxs_A Inosine-5'-monophosphat 89.6 1.2 4.1E-05 46.9 9.6 99 80-185 262-363 (496)
357 2qr6_A IMP dehydrogenase/GMP r 89.6 4.7 0.00016 40.6 13.7 131 102-261 171-307 (393)
358 3gka_A N-ethylmaleimide reduct 89.5 6.4 0.00022 39.8 14.7 147 100-276 165-334 (361)
359 1n8f_A DAHP synthetase; (beta/ 89.5 5.2 0.00018 40.7 13.8 70 149-218 256-348 (350)
360 1vcf_A Isopentenyl-diphosphate 89.4 0.97 3.3E-05 44.7 8.4 97 79-185 172-285 (332)
361 1ep3_A Dihydroorotate dehydrog 89.4 1.7 5.7E-05 41.8 9.9 100 80-185 155-270 (311)
362 3dgb_A Muconate cycloisomerase 89.4 2.5 8.5E-05 42.7 11.5 126 160-313 145-278 (382)
363 3n3m_A Orotidine 5'-phosphate 89.4 0.76 2.6E-05 46.6 7.6 110 149-279 148-279 (342)
364 3ngj_A Deoxyribose-phosphate a 89.3 5.1 0.00017 38.6 13.1 143 151-310 81-229 (239)
365 3i65_A Dihydroorotate dehydrog 89.3 1.9 6.4E-05 44.8 10.7 98 150-260 268-374 (415)
366 1eye_A DHPS 1, dihydropteroate 89.3 3.7 0.00013 40.3 12.3 104 161-282 25-129 (280)
367 1ydn_A Hydroxymethylglutaryl-C 89.2 9.6 0.00033 36.7 15.2 159 78-259 61-230 (295)
368 1qop_A Tryptophan synthase alp 89.2 6.5 0.00022 37.6 13.8 115 150-275 19-146 (268)
369 4djd_D C/Fe-SP, corrinoid/iron 89.2 1.2 4.1E-05 44.8 8.8 66 106-180 91-156 (323)
370 3qz6_A HPCH/HPAI aldolase; str 89.1 5.4 0.00019 38.3 13.2 82 170-275 29-110 (261)
371 2ehh_A DHDPS, dihydrodipicolin 88.9 6.3 0.00021 38.3 13.6 171 59-274 34-220 (294)
372 3sbf_A Mandelate racemase / mu 88.9 3.2 0.00011 42.1 12.0 146 150-312 122-284 (401)
373 3tcs_A Racemase, putative; PSI 88.9 4.3 0.00015 41.1 12.9 128 163-312 146-282 (388)
374 1i4n_A Indole-3-glycerol phosp 88.9 6.5 0.00022 37.9 13.5 137 142-316 93-236 (251)
375 3bo9_A Putative nitroalkan dio 88.8 1.8 6.2E-05 42.8 9.8 92 79-186 115-206 (326)
376 1dos_A Aldolase class II; lyas 88.8 12 0.00042 38.0 16.0 229 78-327 18-305 (358)
377 1eep_A Inosine 5'-monophosphat 88.8 3.9 0.00013 41.4 12.5 119 167-314 154-289 (404)
378 1wbh_A KHG/KDPG aldolase; lyas 88.7 11 0.00037 35.1 14.6 175 81-317 9-191 (214)
379 1qwg_A PSL synthase;, (2R)-pho 88.6 2.4 8.2E-05 41.3 10.2 164 53-276 8-198 (251)
380 1mxs_A KDPG aldolase; 2-keto-3 88.6 5 0.00017 37.8 12.3 176 80-317 18-201 (225)
381 3w01_A Heptaprenylglyceryl pho 88.6 2.4 8.3E-05 40.7 10.2 172 105-316 32-220 (235)
382 1gox_A (S)-2-hydroxy-acid oxid 88.5 2.2 7.5E-05 43.0 10.4 90 80-184 216-308 (370)
383 2chr_A Chloromuconate cycloiso 88.5 3.6 0.00012 40.8 11.9 102 160-282 139-244 (370)
384 1to3_A Putative aldolase YIHT; 88.4 2.6 8.8E-05 41.6 10.6 134 99-260 111-254 (304)
385 1yxy_A Putative N-acetylmannos 88.3 3.2 0.00011 38.3 10.6 80 89-184 133-214 (234)
386 1xi3_A Thiamine phosphate pyro 88.3 0.9 3.1E-05 41.0 6.7 93 78-186 99-191 (215)
387 3mzn_A Glucarate dehydratase; 88.2 3.4 0.00012 42.8 11.8 98 163-283 182-287 (450)
388 2vc6_A MOSA, dihydrodipicolina 88.2 5.7 0.00019 38.6 12.8 168 62-274 37-220 (292)
389 3ewb_X 2-isopropylmalate synth 88.2 6.1 0.00021 38.6 13.0 154 102-277 33-194 (293)
390 2r14_A Morphinone reductase; H 88.1 5.8 0.0002 40.2 13.2 154 100-276 170-346 (377)
391 2vp8_A Dihydropteroate synthas 88.0 3.4 0.00012 41.4 11.3 104 161-282 61-165 (318)
392 1aj0_A DHPS, dihydropteroate s 88.0 6.4 0.00022 38.6 13.0 104 161-282 34-138 (282)
393 1ps9_A 2,4-dienoyl-COA reducta 88.0 4.2 0.00014 43.6 12.7 156 100-274 145-326 (671)
394 3i6e_A Muconate cycloisomerase 87.9 3.3 0.00011 41.8 11.2 125 160-313 145-276 (385)
395 3ve9_A Orotidine-5'-phosphate 87.8 7.1 0.00024 36.7 12.7 155 143-329 43-201 (215)
396 3exr_A RMPD (hexulose-6-phosph 87.7 14 0.00048 34.5 14.7 143 142-316 49-202 (221)
397 4dye_A Isomerase; enolase fami 87.7 12 0.00039 38.1 15.2 124 164-314 169-295 (398)
398 3tha_A Tryptophan synthase alp 87.6 2.1 7.1E-05 41.6 9.1 166 105-316 37-233 (252)
399 3o07_A Pyridoxine biosynthesis 87.6 1.5 5.2E-05 43.5 8.2 115 89-218 115-252 (291)
400 3sr7_A Isopentenyl-diphosphate 87.5 1.3 4.3E-05 45.2 7.8 86 88-184 206-306 (365)
401 3ndo_A Deoxyribose-phosphate a 87.5 5.2 0.00018 38.3 11.7 171 107-309 40-218 (231)
402 3rmj_A 2-isopropylmalate synth 87.4 4 0.00014 41.4 11.5 110 132-257 120-233 (370)
403 3ovp_A Ribulose-phosphate 3-ep 87.4 7.3 0.00025 36.7 12.7 166 103-316 24-203 (228)
404 3ewb_X 2-isopropylmalate synth 87.3 4.1 0.00014 39.9 11.2 110 132-257 113-226 (293)
405 4hpn_A Putative uncharacterize 87.2 4.6 0.00016 40.3 11.7 96 165-282 146-244 (378)
406 3qm3_A Fructose-bisphosphate a 87.1 28 0.00096 35.3 18.4 233 76-328 19-305 (357)
407 2yyu_A Orotidine 5'-phosphate 87.0 21 0.0007 33.7 15.7 149 142-316 48-221 (246)
408 3fa4_A 2,3-dimethylmalate lyas 86.9 9.4 0.00032 37.9 13.6 86 101-187 100-192 (302)
409 1q7z_A 5-methyltetrahydrofolat 86.9 2.7 9.4E-05 45.0 10.4 134 134-282 210-389 (566)
410 1icp_A OPR1, 12-oxophytodienoa 86.8 4.3 0.00015 41.0 11.4 155 100-276 171-348 (376)
411 1tx2_A DHPS, dihydropteroate s 86.8 4.6 0.00016 40.0 11.3 103 163-282 61-164 (297)
412 2hsa_B 12-oxophytodienoate red 86.7 17 0.00059 37.1 15.9 157 100-276 175-366 (402)
413 2qiw_A PEP phosphonomutase; st 86.7 1.9 6.6E-05 41.7 8.3 136 93-262 87-238 (255)
414 3iv3_A Tagatose 1,6-diphosphat 86.5 7.8 0.00027 39.0 12.9 142 169-321 114-291 (332)
415 2v9d_A YAGE; dihydrodipicolini 86.5 11 0.00037 37.7 14.0 132 101-274 118-254 (343)
416 2zbt_A Pyridoxal biosynthesis 86.5 1.8 6.2E-05 41.8 8.1 92 89-186 125-239 (297)
417 1chr_A Chloromuconate cycloiso 86.5 4 0.00014 40.7 10.9 125 160-312 139-271 (370)
418 2cw6_A Hydroxymethylglutaryl-C 86.4 5.9 0.0002 38.5 11.7 140 98-259 82-231 (298)
419 3vnd_A TSA, tryptophan synthas 86.4 15 0.00051 35.6 14.5 117 151-276 18-148 (267)
420 1zfj_A Inosine monophosphate d 86.3 3.3 0.00011 42.7 10.4 90 88-184 274-364 (491)
421 3r2g_A Inosine 5'-monophosphat 86.3 0.99 3.4E-05 45.9 6.3 92 80-185 131-228 (361)
422 2pgw_A Muconate cycloisomerase 86.3 20 0.00069 35.7 15.9 70 101-187 154-224 (384)
423 1qpo_A Quinolinate acid phosph 86.3 1.6 5.4E-05 43.0 7.6 86 211-311 181-270 (284)
424 3oix_A Putative dihydroorotate 86.3 3.4 0.00011 41.6 10.1 143 101-260 146-304 (345)
425 3mwc_A Mandelate racemase/muco 86.2 3.8 0.00013 41.6 10.7 119 164-314 164-289 (400)
426 3tdn_A FLR symmetric alpha-bet 86.2 1.3 4.4E-05 41.5 6.7 70 241-315 36-113 (247)
427 2rdx_A Mandelate racemase/muco 85.9 8.6 0.00029 38.4 13.0 69 101-187 152-222 (379)
428 3obk_A Delta-aminolevulinic ac 85.7 9.1 0.00031 38.9 12.7 169 92-284 63-291 (356)
429 2fli_A Ribulose-phosphate 3-ep 85.7 2.5 8.6E-05 38.4 8.2 167 102-316 22-204 (220)
430 3p0w_A Mandelate racemase/muco 85.6 3.6 0.00012 43.0 10.3 99 162-283 199-305 (470)
431 2agk_A 1-(5-phosphoribosyl)-5- 85.6 0.93 3.2E-05 43.7 5.4 68 241-315 39-108 (260)
432 3ivs_A Homocitrate synthase, m 85.5 3.6 0.00012 42.7 10.1 157 78-257 90-252 (423)
433 1zlp_A PSR132, petal death pro 85.4 1.5 5.2E-05 43.9 7.0 85 171-261 52-137 (318)
434 3cyj_A Mandelate racemase/muco 85.3 8.4 0.00029 38.4 12.5 133 150-311 131-271 (372)
435 2ftp_A Hydroxymethylglutaryl-C 85.3 24 0.00082 34.2 15.5 135 98-257 85-232 (302)
436 3ble_A Citramalate synthase fr 85.2 3.9 0.00013 40.7 10.0 136 101-258 101-243 (337)
437 2r91_A 2-keto-3-deoxy-(6-phosp 85.1 12 0.00041 36.2 13.2 164 59-274 32-211 (286)
438 2qjg_A Putative aldolase MJ040 85.1 6.3 0.00022 37.2 11.0 64 103-184 173-236 (273)
439 2tps_A Protein (thiamin phosph 85.0 2.1 7.1E-05 39.1 7.3 94 78-187 107-202 (227)
440 2opj_A O-succinylbenzoate-COA 85.0 7.3 0.00025 38.5 11.8 101 161-283 78-179 (327)
441 2bdq_A Copper homeostasis prot 85.0 2.3 7.8E-05 40.7 7.7 125 174-310 17-153 (224)
442 2w6r_A Imidazole glycerol phos 84.8 1.3 4.4E-05 41.7 5.9 68 242-314 32-107 (266)
443 1xg4_A Probable methylisocitra 84.6 2.2 7.5E-05 42.2 7.7 85 171-261 30-115 (295)
444 2wqp_A Polysialic acid capsule 84.5 14 0.00048 37.4 13.7 139 76-222 91-272 (349)
445 3pfr_A Mandelate racemase/muco 84.5 4.2 0.00015 42.2 10.2 98 163-283 185-290 (455)
446 3bg3_A Pyruvate carboxylase, m 84.5 20 0.0007 39.5 16.0 157 102-279 131-307 (718)
447 3gnn_A Nicotinate-nucleotide p 84.3 3.2 0.00011 41.2 8.8 62 246-312 222-283 (298)
448 2yzr_A Pyridoxal biosynthesis 84.0 2.2 7.6E-05 43.0 7.5 86 149-259 16-102 (330)
449 1thf_D HISF protein; thermophI 83.9 1.5 5.1E-05 40.8 5.9 70 241-315 31-108 (253)
450 3vkj_A Isopentenyl-diphosphate 83.6 2.6 8.8E-05 42.8 8.0 97 78-184 176-295 (368)
451 1nvm_A HOA, 4-hydroxy-2-oxoval 83.6 29 0.001 34.3 15.5 149 77-257 69-223 (345)
452 2dqw_A Dihydropteroate synthas 83.6 3.2 0.00011 41.1 8.4 103 161-282 48-151 (294)
453 2y5s_A DHPS, dihydropteroate s 83.5 5.5 0.00019 39.4 10.0 103 161-282 42-145 (294)
454 1vli_A Spore coat polysacchari 83.5 16 0.00056 37.4 13.8 137 75-218 100-280 (385)
455 2ffc_A Orotidine 5-monophospha 83.5 25 0.00084 35.7 15.0 145 142-315 154-329 (353)
456 3qja_A IGPS, indole-3-glycerol 83.4 4.4 0.00015 39.3 9.2 88 79-184 152-241 (272)
457 3eoo_A Methylisocitrate lyase; 83.4 2.4 8.2E-05 42.1 7.4 83 172-261 36-119 (298)
458 1p4c_A L(+)-mandelate dehydrog 83.3 1.7 5.8E-05 44.1 6.4 70 243-317 236-314 (380)
459 2qr6_A IMP dehydrogenase/GMP r 83.3 2.4 8.3E-05 42.7 7.6 90 88-186 211-307 (393)
460 2y88_A Phosphoribosyl isomeras 83.2 1.7 5.9E-05 40.2 6.0 70 241-316 32-109 (244)
461 2z6i_A Trans-2-enoyl-ACP reduc 83.1 3.7 0.00013 40.5 8.7 89 81-185 103-191 (332)
462 3nav_A Tryptophan synthase alp 83.0 26 0.0009 34.0 14.6 167 152-330 21-205 (271)
463 1vzw_A Phosphoribosyl isomeras 82.9 1.9 6.4E-05 40.1 6.1 69 241-315 33-109 (244)
464 1o4u_A Type II quinolic acid p 82.9 3.4 0.00012 40.7 8.2 63 244-312 204-270 (285)
465 3inp_A D-ribulose-phosphate 3- 82.9 3.8 0.00013 39.5 8.4 180 90-316 28-229 (246)
466 4gj1_A 1-(5-phosphoribosyl)-5- 82.8 22 0.00074 33.6 13.6 173 102-314 37-228 (243)
467 4hb7_A Dihydropteroate synthas 82.8 10 0.00035 37.2 11.5 103 161-282 26-130 (270)
468 4h83_A Mandelate racemase/muco 82.8 6.7 0.00023 39.6 10.6 101 161-282 161-266 (388)
469 3fok_A Uncharacterized protein 82.7 12 0.0004 37.5 12.0 148 170-333 133-299 (307)
470 4e4f_A Mannonate dehydratase; 82.6 14 0.00048 37.8 13.1 149 150-312 138-311 (426)
471 1w3i_A EDA, 2-keto-3-deoxy glu 82.5 13 0.00045 36.1 12.2 164 60-274 34-212 (293)
472 3tsm_A IGPS, indole-3-glycerol 82.4 3.3 0.00011 40.5 7.8 69 242-315 81-154 (272)
473 3eeg_A 2-isopropylmalate synth 82.3 9.6 0.00033 37.8 11.4 152 102-275 34-189 (325)
474 4a29_A Engineered retro-aldol 82.3 31 0.001 33.6 14.6 164 124-333 82-251 (258)
475 3paj_A Nicotinate-nucleotide p 82.3 3.4 0.00012 41.5 8.1 86 211-311 218-304 (320)
476 2uva_G Fatty acid synthase bet 82.3 19 0.00065 44.3 15.9 192 79-316 574-801 (2060)
477 4dxk_A Mandelate racemase / mu 82.0 5.8 0.0002 40.2 9.9 127 168-312 157-293 (400)
478 1q7z_A 5-methyltetrahydrofolat 81.7 10 0.00035 40.6 12.1 69 243-311 129-207 (566)
479 2fds_A Orotidine-monophosphate 81.4 3.9 0.00013 41.5 8.2 109 150-279 151-281 (352)
480 2nx9_A Oxaloacetate decarboxyl 81.4 26 0.00088 36.7 14.7 121 103-257 107-230 (464)
481 3ivs_A Homocitrate synthase, m 81.3 13 0.00046 38.4 12.4 146 102-273 67-216 (423)
482 1s2w_A Phosphoenolpyruvate pho 81.2 7.5 0.00026 38.3 10.0 133 101-261 99-239 (295)
483 3aty_A Tcoye, prostaglandin F2 81.1 19 0.00066 36.4 13.3 151 100-276 178-354 (379)
484 2h9a_B CO dehydrogenase/acetyl 81.1 7.9 0.00027 38.5 10.2 67 104-180 82-149 (310)
485 1tv5_A Dhodehase, dihydroorota 81.0 7.9 0.00027 40.3 10.6 99 149-260 295-402 (443)
486 1wbh_A KHG/KDPG aldolase; lyas 80.8 15 0.00052 34.2 11.5 107 163-309 26-135 (214)
487 1wa3_A 2-keto-3-deoxy-6-phosph 80.7 3.5 0.00012 37.2 6.9 74 89-185 104-178 (205)
488 4e38_A Keto-hydroxyglutarate-a 80.6 17 0.00057 34.7 11.9 175 80-315 26-207 (232)
489 1vc4_A Indole-3-glycerol phosp 80.6 5 0.00017 38.4 8.4 70 241-315 66-140 (254)
490 1rqb_A Transcarboxylase 5S sub 80.5 33 0.0011 36.6 15.3 124 102-257 123-249 (539)
491 3gnn_A Nicotinate-nucleotide p 80.5 5.8 0.0002 39.4 8.9 142 78-262 135-283 (298)
492 1u83_A Phosphosulfolactate syn 80.5 3.6 0.00012 40.6 7.3 148 53-263 35-195 (276)
493 1vcf_A Isopentenyl-diphosphate 80.1 3.8 0.00013 40.4 7.5 70 244-317 196-292 (332)
494 1kbi_A Cytochrome B2, L-LCR; f 80.0 12 0.00042 39.4 11.8 98 140-261 333-433 (511)
495 3ngj_A Deoxyribose-phosphate a 79.9 7.1 0.00024 37.6 9.1 101 134-259 125-228 (239)
496 4adt_A Pyridoxine biosynthetic 79.8 1.7 5.8E-05 43.1 4.9 93 89-185 125-238 (297)
497 3ijl_A Muconate cycloisomerase 79.8 8.6 0.00029 38.0 10.0 96 160-282 131-230 (338)
498 2yr1_A 3-dehydroquinate dehydr 79.8 44 0.0015 32.0 15.6 119 134-272 61-189 (257)
499 1ydo_A HMG-COA lyase; TIM-barr 79.6 10 0.00034 37.4 10.3 138 98-257 83-230 (307)
500 1h5y_A HISF; histidine biosynt 79.6 1.9 6.4E-05 39.5 4.8 70 240-314 33-110 (253)
No 1
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=100.00 E-value=2.9e-74 Score=574.19 Aligned_cols=287 Identities=31% Similarity=0.500 Sum_probs=273.3
Q ss_pred cccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcE
Q 012815 74 CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPV 153 (456)
Q Consensus 74 a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPV 153 (456)
.++++++||++|++++++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++++||
T Consensus 7 ~~~~~~~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~Pv 86 (298)
T 3eoo_A 7 LISAGAKFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPL 86 (298)
T ss_dssp CCCHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCE
T ss_pred cccHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeE
Confidence 46789999999999999999999999999999999999999999999978899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecch
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS 233 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA 233 (456)
|+|+|+|||+++++.+++++|+++||+|||||||++||+|||.+||+|+|.+|+++||+||++|++ ++||+|+||||+
T Consensus 87 iaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTDa 164 (298)
T 3eoo_A 87 LVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTDA 164 (298)
T ss_dssp EEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeehh
Confidence 999999999999999999999999999999999999999999999999999999999999999986 589999999999
Q ss_pred hhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 234 RQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 234 ~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
+...++||+|+|+++|++||||+||+|++++.+++++|+++++ +|+++|++++ |++|.++.+||+++||++|+||+++
T Consensus 165 ~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-~Pl~~n~~~~-g~tp~~~~~eL~~lGv~~v~~~~~~ 242 (298)
T 3eoo_A 165 AAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-VPILANLTEF-GSTPLFTLDELKGANVDIALYCCGA 242 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-SCBEEECCTT-SSSCCCCHHHHHHTTCCEEEECSHH
T ss_pred hhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-CCeEEEeccC-CCCCCCCHHHHHHcCCeEEEEchHH
Confidence 9888999999999999999999999999999999999999998 8999999987 6789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHccccc
Q 012815 314 IGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (456)
Q Consensus 314 l~aa~~A~~~~l~~i~~-g~~~-~~~~~~~~~e~~~lvg~~~~~~~e~~y~~~ 364 (456)
+++++.||++++++|++ |+.. ..+.+++|+|+++++||++|++++++|...
T Consensus 243 ~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 295 (298)
T 3eoo_A 243 YRAMNKAALNFYETVRRDGTQKAAVPTMQTRAQLYDYLGYYAYEEKLDQLFNQ 295 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHcCCccchhhcCCCHHHHHHHcCHHHHHHHHHHHhcc
Confidence 99999999999999986 4443 356788999999999999999999998643
No 2
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=100.00 E-value=6.5e-74 Score=572.39 Aligned_cols=288 Identities=35% Similarity=0.563 Sum_probs=265.4
Q ss_pred ccHHHHHHHHHhCCC-ceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCc
Q 012815 75 LSPAKSLRQILELPG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIP 152 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~-~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iP 152 (456)
++++++||++|++++ ++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++ ++|
T Consensus 3 ~~~~~~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~P 82 (302)
T 3fa4_A 3 VTAATSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTP 82 (302)
T ss_dssp CCHHHHHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSC
T ss_pred CCHHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCC
Confidence 467899999999875 689999999999999999999999999999988889999999999999999999999986 899
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
|++|+|+|||+++|+.+++++|+++||+|||||||++||+|||+.||+|+|.+|+++||+||++|+++.++||+||||||
T Consensus 83 viaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD 162 (302)
T 3fa4_A 83 VIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTD 162 (302)
T ss_dssp EEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEEC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999987789999999999
Q ss_pred hhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 233 SRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 233 A~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
++...++||||+|+++|.+||||+||+|++++.+++++|+++++++|+++||+++ |++|.++.+||+++||++|+||++
T Consensus 163 a~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~n~~~~-g~~p~~~~~eL~~lGv~~v~~~~~ 241 (302)
T 3fa4_A 163 SLQTHGYEESVARLRAARDAGADVGFLEGITSREMARQVIQDLAGWPLLLNMVEH-GATPSISAAEAKEMGFRIIIFPFA 241 (302)
T ss_dssp CHHHHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTTTSCEEEECCTT-SSSCCCCHHHHHHHTCSEEEETTT
T ss_pred ccccCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhcCCceeEEEecC-CCCCCCCHHHHHHcCCCEEEEchH
Confidence 9988899999999999999999999999999999999999999768999999986 678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHcccc
Q 012815 313 LIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYAT 363 (456)
Q Consensus 313 ll~aa~~A~~~~l~~i~~g~~~~~~~~~~~~e~~~lvg~~~~~~~e~~y~~ 363 (456)
+++++++||++++++|++++....+.+++++|+++++||++|++++++|..
T Consensus 242 ~~raa~~A~~~~~~~i~~~g~~~~~~~~~~~el~~~~g~~~~~~~~~~~~~ 292 (302)
T 3fa4_A 242 ALGPAVAAMREAMEKLKRDGIPGLDKEMTPQMLFRVCGLDESMKVDAQAGG 292 (302)
T ss_dssp THHHHHHHHHHHHHHHHHHSSCCCCTTCCHHHHHHHTTHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 999999999999999987444444778899999999999999999999974
No 3
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=100.00 E-value=5.6e-74 Score=574.08 Aligned_cols=295 Identities=33% Similarity=0.512 Sum_probs=265.4
Q ss_pred Cccccc-cccHHHHHHHHHhCC-CceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHH
Q 012815 68 STGVEA-CLSPAKSLRQILELP-GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLI 145 (456)
Q Consensus 68 s~~~~~-a~~~a~~Lr~ll~~~-~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I 145 (456)
|++-+- .+.++++||++|+++ +++++|||||++||++++++||++||+||++++++.+|+||++.+|++||++|+++|
T Consensus 2 ~~~~~~~~~~~a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i 81 (307)
T 3lye_A 2 SHMAEDEPFSGAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMI 81 (307)
T ss_dssp ------CTTCHHHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHH
T ss_pred CcccCCCchhHHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhh
Confidence 444443 567899999999875 689999999999999999999999999999998888999999999999999999999
Q ss_pred HhccC--CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCC
Q 012815 146 TQAVS--IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS 223 (456)
Q Consensus 146 ~ra~~--iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~ 223 (456)
+++++ +||++|+|+|||+++|+.+++++|+++||+|||||||++||+|||++||+|+|.+|+++||+||++|+++.|+
T Consensus 82 ~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~ 161 (307)
T 3lye_A 82 ANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRS 161 (307)
T ss_dssp HTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTC
T ss_pred hccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 99875 9999999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred CeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC
Q 012815 224 DIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG 303 (456)
Q Consensus 224 dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG 303 (456)
||+|+||||++...++||+|+|+++|++||||+||+|++++.+++++|+++++++|+++||+++ |++|.++.+||+++|
T Consensus 162 d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~-g~~p~~t~~eL~~lG 240 (307)
T 3lye_A 162 DFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVEN-GHSPLITVEEAKAMG 240 (307)
T ss_dssp CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETT-SSSCCCCHHHHHHHT
T ss_pred CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecC-CCCCCCCHHHHHHcC
Confidence 9999999999988899999999999999999999999999999999999998768999999986 678999999999999
Q ss_pred CCEEeccchHHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHcccc
Q 012815 304 FKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYAT 363 (456)
Q Consensus 304 v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~~~~~~~~~~~~e~~~lvg~~~~~~~e~~y~~ 363 (456)
|++|+||+++++++++||++++++|++++....+.+++++|+++++||++|++++++|..
T Consensus 241 v~~v~~~~~~~raa~~a~~~~~~~l~~~g~~~~~~~~~~~el~~~~g~~~~~~~~~~~~~ 300 (307)
T 3lye_A 241 FRIMIFSFATLAPAYAAIRETLVRLRDHGVVGTPDGITPVRLFEVCGLQDAMEVDNGAGG 300 (307)
T ss_dssp CSEEEEETTTHHHHHHHHHHHHHHHHHHSCCCCCTTCCHHHHHHHTTHHHHHHHHHHTTC
T ss_pred CeEEEEChHHHHHHHHHHHHHHHHHHHhCCCCccccCCHHHHHHhcChHHHHHHHHHhCc
Confidence 999999999999999999999999986433333778899999999999999999999974
No 4
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=100.00 E-value=1.6e-71 Score=555.94 Aligned_cols=283 Identities=34% Similarity=0.569 Sum_probs=269.3
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEE
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVI 154 (456)
+.++++||++|++++++++|||||++||++++++||++||+||++++++ +|+||++.+|++||++|+++|++++++||+
T Consensus 15 ~~~a~~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~-~G~pD~~~vt~~em~~~~~~I~r~~~~pvi 93 (305)
T 3ih1_A 15 EELANRFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTAS-KGLPDLGIVTSTEVAERARDLVRATDLPVL 93 (305)
T ss_dssp HHHHHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHH-HTCCSSSCSCHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHh-CCCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 5779999999999999999999999999999999999999999999974 799999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
+|+|+|||+++++.+++++|+++||+|||||||.+||+|||++||+|+|.+|+++||+|+++| ++||+|+||||++
T Consensus 94 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A----~~~~~I~ARtda~ 169 (305)
T 3ih1_A 94 VDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV----APSLYIVARTDAR 169 (305)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH----CTTSEEEEEECCH
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc----CCCeEEEEeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5799999999999
Q ss_pred hcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 235 ~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
...+++++|+|+++|++||||+||+|++++.+++++|+++++ +|+++||+++ |++|.++.+||+++||++|+||++++
T Consensus 170 ~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~-~P~~~n~~~~-g~tp~~~~~eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 170 GVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVN-APLLANMTEF-GKTPYYSAEEFANMGFQMVIYPVTSL 247 (305)
T ss_dssp HHHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSC-SCBEEECCTT-SSSCCCCHHHHHHTTCSEEEECSHHH
T ss_pred cccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcC-CCEEEeecCC-CCCCCCCHHHHHHcCCCEEEEchHHH
Confidence 888999999999999999999999999999999999999998 7999999986 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHccccc
Q 012815 315 GVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (456)
Q Consensus 315 ~aa~~A~~~~l~~i~~-g~~~-~~~~~~~~~e~~~lvg~~~~~~~e~~y~~~ 364 (456)
++++.||++++++|++ |+.. ..+.+++|+|+++++||++|+++|++|.+.
T Consensus 248 raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 299 (305)
T 3ih1_A 248 RVAAKAYENVFTLIKETGSQKDALSNMQTRSELYETISYHDFEELDTGIAKT 299 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSSCGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhcCCcccchhcCCCHHHHHHHcChHHHHHHHHhhccc
Confidence 9999999999999986 4443 356789999999999999999999999754
No 5
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=100.00 E-value=6.1e-71 Score=554.48 Aligned_cols=285 Identities=40% Similarity=0.657 Sum_probs=268.5
Q ss_pred cccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCc
Q 012815 74 CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIP 152 (456)
Q Consensus 74 a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iP 152 (456)
+..++++||++|++++++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++ ++|
T Consensus 24 ~~~~~~~lr~l~~~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~P 103 (318)
T 1zlp_A 24 STGRKTTMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLC 103 (318)
T ss_dssp ----CCHHHHHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSE
T ss_pred chhHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCC
Confidence 3456778999999999999999999999999999999999999999987789999999999999999999999999 999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
||+|+|+|||+++++.+++++|+++||+|||||||.+||+|||.+||+|+|++++++||+|+++|+.. ++|+|+||||
T Consensus 104 viaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~--~~~~I~ARtd 181 (318)
T 1zlp_A 104 VVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD--SDFFLVARTD 181 (318)
T ss_dssp EEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT--SCCEEEEEEC
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc--CCcEEEEeeH
Confidence 99999999999999999999999999999999999999999999999999999999999999999974 6899999999
Q ss_pred hhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 233 SRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 233 A~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
++...+++++|+|+++|++||||+||+|++++.+++++|+++++ +|+++|++++ |++|.++.+||+++||++|+||++
T Consensus 182 a~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~-~P~lan~~~~-g~~~~~~~~eL~~lGv~~v~~~~~ 259 (318)
T 1zlp_A 182 ARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTK-GLRIANMIEG-GKTPLHTPEEFKEMGFHLIAHSLT 259 (318)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSC-SEEEEEECTT-SSSCCCCHHHHHHHTCCEEEECSH
T ss_pred HhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcC-CCEEEEeccC-CCCCCCCHHHHHHcCCeEEEEchH
Confidence 99888999999999999999999999999999999999999998 8999999985 678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCC-CCCCCCHHHHHHhcCcccHHHHHHccc
Q 012815 313 LIGVSVRAMQDALTAIKG-GRIPS-PGSMPSFQEIKETLGFNTYYEEEKRYA 362 (456)
Q Consensus 313 ll~aa~~A~~~~l~~i~~-g~~~~-~~~~~~~~e~~~lvg~~~~~~~e~~y~ 362 (456)
++++++.||++++++|++ |.... .+.+++++|+++++||++|+++|++|.
T Consensus 260 ~~raa~~a~~~~~~~l~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~ 311 (318)
T 1zlp_A 260 AVYATARALVNIMKILKEKGTTRDDLDQMATFSEFNELISLESWYEMESKFK 311 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSTTCGGGSCCHHHHHHHHTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccCCCHHHHHHhcCHHHHHHHHHHhc
Confidence 999999999999999987 55443 467899999999999999999999993
No 6
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=100.00 E-value=5.1e-70 Score=543.11 Aligned_cols=283 Identities=34% Similarity=0.531 Sum_probs=268.1
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.++++||++|++++++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++++||++
T Consensus 4 ~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~Pvia 83 (295)
T 1xg4_A 4 SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLV 83 (295)
T ss_dssp CHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEE
T ss_pred hHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEe
Confidence 46889999999999999999999999999999999999999999997779999999999999999999999999999999
Q ss_pred eCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 156 DGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 156 D~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
|+|+||| +++++.+++++|+++||+|||||||.+||+|||.+||+|+|.+++++||+|+++|+. +++|+|+||||++
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~--~~~~~i~aRtda~ 161 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMARTDAL 161 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECCH
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc--CCCcEEEEecHHh
Confidence 9999999 899999999999999999999999999999999999999999999999999999987 4799999999999
Q ss_pred hcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 235 ~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
...+++++|+||++|++||||+||+|++++.+++++|+++++ +|+++|++++ |++|.++.+||+++||++|+||++++
T Consensus 162 ~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-iP~~~N~~~~-g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 162 AVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-VPILANITEF-GATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp HHHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-SCBEEECCSS-SSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred hhcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-CCEEEEeccc-CCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 888999999999999999999999999999999999999998 8999999985 67899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHccc
Q 012815 315 GVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (456)
Q Consensus 315 ~aa~~A~~~~l~~i~~-g~~~-~~~~~~~~~e~~~lvg~~~~~~~e~~y~ 362 (456)
++++.||++++++|++ |+.. ..+.+++++|+++++||++|+++|++|.
T Consensus 240 ~aa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~ 289 (295)
T 1xg4_A 240 RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLF 289 (295)
T ss_dssp HHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhCCcccccccCCCHHHHHHHcCHHHHHHHHHHHh
Confidence 9999999999999987 5443 3467889999999999999999999997
No 7
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=100.00 E-value=6e-71 Score=571.11 Aligned_cols=282 Identities=22% Similarity=0.339 Sum_probs=235.0
Q ss_pred hhhcccCCCCcccccccccC-------CCccccc--cccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecc
Q 012815 47 LLLNTATNPGTINRTRVYRK-------NSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSG 117 (456)
Q Consensus 47 ~~~~~~~~pr~~~~~R~y~~-------~s~~~~~--a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG 117 (456)
.+++||++|||+|++|+||+ ||++++| ++.++++||+||+.++++++|||||++||++++++||++||+||
T Consensus 10 ~~~~w~~~~r~~~~~r~yta~~v~~~rgs~~~~~~~~~~~a~~lr~Ll~~~~~l~~~ga~D~~sA~~~~~aGf~Aiy~SG 89 (433)
T 3eol_A 10 SLIPSAPKGRFDGIERAHTAEDVKRLRGSVEIKYSLAEMGANRLWKLIHEEDFVNALGALSGNQAMQMVRAGLKAIYLSG 89 (433)
T ss_dssp TTSTTCCTTTTTTCCCSSCHHHHHHHHCSCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCSSHHHHHHHHHTTCCCEEEC-
T ss_pred eehhcccCccccCCcCCCCHHHHHHhcCCCccCCchHHHHHHHHHHHhccCCCEEeCCCCcHHHHHHHHHhCCCEEEech
Confidence 57899999999999999996 9999999 57889999999999999999999999999999999999999999
Q ss_pred hHHhhh----hcccCCCCCCCHHHHHHHHHHHHhcc-------------------CCcEEEeCCCCCCCHHHHHHHHHHH
Q 012815 118 FSISAA----RLALPDTGFISYGEMVDQGQLITQAV-------------------SIPVIGDGDNGYGNAMNVKRTVKGY 174 (456)
Q Consensus 118 ~avSas----~lG~PD~~~lt~~Eml~~~r~I~ra~-------------------~iPVIaD~DtGYG~~~nv~rtVk~l 174 (456)
|++|++ .+|+||.+++|++||++++++|++++ .+|||||+|+|||++.||+++|++|
T Consensus 90 ~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~d~~lPIiaD~DtGfG~~~nv~rtVk~~ 169 (433)
T 3eol_A 90 WQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGLSVDTWFAPIVADAEAGFGDPLDAFEIMKAY 169 (433)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHHTTSCCSSSCSCCCEEEECC---CCHHHHHHHHHHH
T ss_pred HHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhcccccccCCCCCeEEECCCCCCCcHHHHHHHHHH
Confidence 999974 58999999999999999999999876 6999999999999999999999999
Q ss_pred HHhCccEEEeCCCCC-CCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc-----------------
Q 012815 175 IKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA----------------- 236 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~-pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~----------------- 236 (456)
+++||+|||||||+. ||||||++||+|+|.+||++||+||++|++.+|+||+||||||++++
T Consensus 170 ~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~~fl~g 249 (433)
T 3eol_A 170 IEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQPFVDY 249 (433)
T ss_dssp HHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTGGGBCS
T ss_pred HHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccccceec
Confidence 999999999999996 99999999999999999999999999999988999999999999653
Q ss_pred -------------ccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-------
Q 012815 237 -------------LSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN------- 295 (456)
Q Consensus 237 -------------~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt------- 295 (456)
.++|+||+|+++|++ |||+||+|.. ++.+++++|+++++ .|.|+|++.. +.+|.++
T Consensus 250 ~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~-~~~P~~~L~~-~~sPsfnw~~~~~~ 326 (433)
T 3eol_A 250 EAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVH-KAHPGKLLAY-NCSPSFNWKKNLDD 326 (433)
T ss_dssp SSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHH-HHSTTCCEEE-ECCSSSCHHHHSCH
T ss_pred cCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhc-ccCCCccccc-CCCCCCcccccCCh
Confidence 679999999999999 9999999875 79999999999876 2456777776 5678887
Q ss_pred ------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012815 296 ------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (456)
Q Consensus 296 ------~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g 331 (456)
.+||+++||++++||++++++++.||.+++++|++.
T Consensus 327 ~~~~~f~~eLa~lGv~~v~~~~a~~raa~~A~~~~a~~i~~~ 368 (433)
T 3eol_A 327 ATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARGYKDR 368 (433)
T ss_dssp HHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHcCCeEEEeCcHHHHHHHHHHHHHHHHHHHc
Confidence 789999999999999999999999999999999863
No 8
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=100.00 E-value=1.2e-70 Score=568.20 Aligned_cols=291 Identities=26% Similarity=0.356 Sum_probs=271.4
Q ss_pred eeeecccchhhhhcccCCCCcccccccccC-------CCccccc--cccHHHHHHHHHhC---CCceeecccCChHHHHH
Q 012815 37 ISFNKTNTNTLLLNTATNPGTINRTRVYRK-------NSTGVEA--CLSPAKSLRQILEL---PGVHQGPACFDALSAKL 104 (456)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~pr~~~~~R~y~~-------~s~~~~~--a~~~a~~Lr~ll~~---~~~lv~pgayDalSArl 104 (456)
||.+|+++..++++||++|||+|++||||+ ||++++| ++..+++||++|++ ++++++|||||++||++
T Consensus 1 ~~~~~~~~~~~~~~~w~~~r~~~~~r~yta~~v~~~rgs~~~~~~~a~~~a~~Lr~ll~~~~~~~~~~~~Ga~d~~sA~~ 80 (435)
T 3lg3_A 1 MTISRTQQIQQLEQEWTSPRWKNITRPYSAEDVIKLRGSVNPECTFAQNGAKKLWELLHGGSRKGYINCLGALTGGQALQ 80 (435)
T ss_dssp CCCCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHH
T ss_pred CCcchHHHHHHHHHhhcChhhcCCCCCCCHHHHHHhCCCCCCcCchHHHHHHHHHHHHHhhccCCcEEeCCCCcHHHHHH
Confidence 677888999999999999999999999995 9999999 46789999999998 88999999999999999
Q ss_pred HHHhCCcEEEecchHHhh----hhcccCCCCCCCHHHHHHHHHHHHhcc---C-------------------CcEEEeCC
Q 012815 105 VEKSGFSFCFTSGFSISA----ARLALPDTGFISYGEMVDQGQLITQAV---S-------------------IPVIGDGD 158 (456)
Q Consensus 105 ~e~aGfdAI~vSG~avSa----s~lG~PD~~~lt~~Eml~~~r~I~ra~---~-------------------iPVIaD~D 158 (456)
++++||++||+|||++|+ +.+|+||.+++|++||+..+++|++++ + +||+||+|
T Consensus 81 ~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~gl~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~~~~d~~lPviaD~D 160 (435)
T 3lg3_A 81 QAKAGVEAIYMSGWQVAADANTASSMYPDQSLYPVDSVPAVVKRINNSFRRADQIQWSNNIEPGSKGYTDYFLPIVADAE 160 (435)
T ss_dssp HHHHTCCSEEECHHHHHHHCCTTCSCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECT
T ss_pred HHHcCCCEEEechHHHhcccchhccCCCCcCcCcHHHHHHHHHHHHHHHHhhhhhhhhccccccccccccCCCCeEEECC
Confidence 999999999999999997 368999999999999999999998864 2 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCC-CCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc-
Q 012815 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA- 236 (456)
Q Consensus 159 tGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~-pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~- 236 (456)
+|||++.|++++|++|+++||+|||||||+. ||||||++||+|+|.+|+++||+||++|++.+|+||+|+||||++++
T Consensus 161 tGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~ 240 (435)
T 3lg3_A 161 AGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAAD 240 (435)
T ss_dssp TCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCC
T ss_pred CCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccc
Confidence 9999999999999999999999999999996 99999999999999999999999999999888899999999998642
Q ss_pred ---------------------------ccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHhCCCCceeeeeeccC
Q 012815 237 ---------------------------LSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPLVPKMANMLEGG 288 (456)
Q Consensus 237 ---------------------------~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~vP~~~N~~~~~ 288 (456)
.++|+||+|+++|++ |||+||+|. .++.+++++|+++++ .|.|.|++..
T Consensus 241 l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~-~~~P~~~La~- 317 (435)
T 3lg3_A 241 LLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVH-AQFPGKLLAY- 317 (435)
T ss_dssp EESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHH-HHSTTCEEEE-
T ss_pred ccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhc-cccCCeEEEe-
Confidence 689999999999999 999999976 579999999999876 3466788876
Q ss_pred CCCCCCC-------------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHc
Q 012815 289 GKTPILN-------------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKG 330 (456)
Q Consensus 289 g~tp~lt-------------~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~ 330 (456)
+.+|.++ .+||+++||++++||+++++++..||.+.++++++
T Consensus 318 ~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~raa~~a~~~~a~~~~~ 372 (435)
T 3lg3_A 318 NCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIHSMWFNMFDLAHAYAQ 372 (435)
T ss_dssp ECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHHHHHHHHHHHHHHHHh
Confidence 5788888 79999999999999999999999999999999987
No 9
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=100.00 E-value=4e-69 Score=535.53 Aligned_cols=281 Identities=32% Similarity=0.492 Sum_probs=260.4
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEE
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVI 154 (456)
|+++++||++|++++++++|||||++||++++++||++||+||++++++ +|+||++.+|++||++|+++|++++++|||
T Consensus 1 m~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~Pvi 79 (290)
T 2hjp_A 1 MTKNQALRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLI 79 (290)
T ss_dssp CCHHHHHHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEE
T ss_pred CChHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 4678999999999999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCC--CccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTR--GRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~--gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
+|+|+|||+++|+.+++++|+++||+|||||||.+||+|||.+ ||+|+|++|+++||+|+++|+.. ++|+|+||||
T Consensus 80 aD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~--~~~~i~aRtd 157 (290)
T 2hjp_A 80 ADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD--RDFVVIARVE 157 (290)
T ss_dssp EECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS--TTSEEEEEEC
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc--CCcEEEEeeh
Confidence 9999999999999999999999999999999999999999999 99999999999999999999875 6899999999
Q ss_pred hh-hcccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHhcC-CCEEe
Q 012815 233 SR-QALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELG-FKLVA 308 (456)
Q Consensus 233 A~-~~~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~elG-v~~Vs 308 (456)
++ ...+++++|+|+++|++||||+||+|+ +++.+++++|+++++. +|+++|++++ |.++.+||+++| |++|+
T Consensus 158 a~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~----~~~~~~eL~~lG~v~~v~ 233 (290)
T 2hjp_A 158 ALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAY----PQLTEADIAALSKVGIVI 233 (290)
T ss_dssp TTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGC----TTSCHHHHHTCTTEEEEE
T ss_pred HhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCC----CCCCHHHHHhcCCeeEEE
Confidence 98 678899999999999999999999999 9998999999999874 7998888764 678999999999 99999
Q ss_pred ccchHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHccc
Q 012815 309 YPLSLIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (456)
Q Consensus 309 ~p~~ll~aa~~A~~~~l~~i~~-g~~~-~~~~~~~~~e~~~lvg~~~~~~~e~~y~ 362 (456)
||++++++++.||++++++|++ |+.. ..+.+++++|+++++|+++|+++|++|.
T Consensus 234 ~~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~ 289 (290)
T 2hjp_A 234 YGNHAIRAAVGAVREVFARIRRDGGIREVDAALPSVKEIIELQGDERMRAVEARYL 289 (290)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHTSSTTTTTTSCCHHHHHHHTTHHHHHHHHHHHC
T ss_pred echHHHHHHHHHHHHHHHHHHHcCCcccccccCCCHHHHHHHcCHHHHHHHHHhhc
Confidence 9999999999999999999986 5543 3457899999999999999999999995
No 10
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3e-69 Score=535.73 Aligned_cols=277 Identities=26% Similarity=0.416 Sum_probs=261.7
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.++++||++|++++++++|||||++||++++++||++||+||++++++++|+||++.+|++||++|+++|++++++|||+
T Consensus 8 ~~~~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~Pvia 87 (287)
T 3b8i_A 8 ELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIA 87 (287)
T ss_dssp HHHHHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 56789999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~ 235 (456)
|+|+|||+++|+.+++++|+++||+|||||||.+||+|||..|| |+|.+|+++||+|+++|+. +++|+|+||||+ .
T Consensus 88 D~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~--~~~~~i~aRtda-a 163 (287)
T 3b8i_A 88 DADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARV--DPALTIIARTNA-E 163 (287)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCC--STTSEEEEEEET-T
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCC--CCCcEEEEechh-h
Confidence 99999999999999999999999999999999999999999999 9999999999999999987 479999999999 8
Q ss_pred cccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 236 ALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 236 ~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
..+++++|+||++|++||||+||+|++++.+++++|+++++ +|+. ++++ +++|.++.+||+++||++|+||+++++
T Consensus 164 ~~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P~i--i~~~-g~~~~~~~~eL~~lGv~~v~~~~~~~r 239 (287)
T 3b8i_A 164 LIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLH-IPLM--LVTY-GNPQLRDDARLARLGVRVVVNGHAAYF 239 (287)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCC-SCEE--EECT-TCGGGCCHHHHHHTTEEEEECCCHHHH
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCC-CCEE--EeCC-CCCCCCCHHHHHHcCCcEEEEChHHHH
Confidence 88999999999999999999999999999999999999987 6765 7775 678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHhcCcccHHHHHHccccc
Q 012815 316 VSVRAMQDALTAIKG-GRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATS 364 (456)
Q Consensus 316 aa~~A~~~~l~~i~~-g~~~~~~~~~~~~e~~~lvg~~~~~~~e~~y~~~ 364 (456)
++++| ++++|++ |+.. .+.+++++|+++++|+++|+++|++|...
T Consensus 240 aa~~a---~~~~l~~~g~~~-~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 285 (287)
T 3b8i_A 240 AAIKA---TYDCLREERGAV-ASDLTASELSKKYTFPEEYQAWARDYMEV 285 (287)
T ss_dssp HHHHH---HHHHHHHHHTCC-CCCSCHHHHHHHTTCHHHHHHHHHHHHSC
T ss_pred HHHHH---HHHHHHHcCCCC-cccCCCHHHHHHHhCHHHHHHHHHHhhcc
Confidence 99999 8888976 5555 67889999999999999999999999754
No 11
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=100.00 E-value=8.6e-70 Score=562.85 Aligned_cols=289 Identities=25% Similarity=0.332 Sum_probs=269.0
Q ss_pred ecccchhhhhccc-CCCCcccccccccC-------CCccccc--cccHHHHHHHHHhCCCceeecccCChHHHHHHHHhC
Q 012815 40 NKTNTNTLLLNTA-TNPGTINRTRVYRK-------NSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSG 109 (456)
Q Consensus 40 ~~~~~~~~~~~~~-~~pr~~~~~R~y~~-------~s~~~~~--a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aG 109 (456)
+|+++..++++|| ++|||++|+||||+ ||++++| ++..+++||++|+.++++++|||||++||++++++|
T Consensus 6 ~~~~~~~~~~~~w~~~~r~~~i~r~Yta~~v~~lrg~~~~~~~~a~~~a~~Lr~ll~~~~~l~~~Ga~D~~sA~~~~~aG 85 (439)
T 3i4e_A 6 SRQQQAQELQKQWETDPRWKGIKRAFTAEDVVRLRGSIQQEHTLAKRGAEKLWTLINNEPFVNALGALTGNQAMQQVKAG 85 (439)
T ss_dssp CHHHHHHHHHHHHHHCGGGTTCCCSSCHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhhcCCCcCCccCCCCHHHHHHHcCCCcccCchHHHHHHHHHHHHhcCCCEEeCCCCCHHHHHHHHHhC
Confidence 6778888999999 99999999999996 9999999 678899999999999999999999999999999999
Q ss_pred CcEEEecchHHhh----hhcccCCCCCCCHHHHHHHHHHHHhc--------------------cC--CcEEEeCCCCCCC
Q 012815 110 FSFCFTSGFSISA----ARLALPDTGFISYGEMVDQGQLITQA--------------------VS--IPVIGDGDNGYGN 163 (456)
Q Consensus 110 fdAI~vSG~avSa----s~lG~PD~~~lt~~Eml~~~r~I~ra--------------------~~--iPVIaD~DtGYG~ 163 (456)
|++||+|||++|+ +.+|+||.+++|++||++.+++|+++ ++ +||+||+|+|||+
T Consensus 86 f~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~rI~~a~~~ad~i~~~~~~~~~~~~~~d~~~PviaD~dtGfG~ 165 (439)
T 3i4e_A 86 LKAIYLSGWQVAGDANVAGEMYPDQSLYPANSVPLVVKRINNTLTRADQIQWSEGKNPGDEGYVDFFAPIVADAEAGFGG 165 (439)
T ss_dssp CSCEEECHHHHHHHTCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEEECTTTTSS
T ss_pred CCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhHhhhhhhccccccccccCCCCCeEEECCCCCCc
Confidence 9999999999997 36899999999999999999999886 34 9999999999999
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCC-CCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc------
Q 012815 164 AMNVKRTVKGYIKAGFAGIILEDQVS-PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA------ 236 (456)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~-pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~------ 236 (456)
+.||+++|++|+++||+|||||||+. ||||||++||+|+|.+|+++||+||++|++.+|+||+|+||||++++
T Consensus 166 ~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~ 245 (439)
T 3i4e_A 166 VLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSD 245 (439)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCC
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccc
Confidence 99999999999999999999999995 99999999999999999999999999999888999999999999753
Q ss_pred ----------------------ccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHhCCCCceeeeeeccCCCCCC
Q 012815 237 ----------------------LSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPLVPKMANMLEGGGKTPI 293 (456)
Q Consensus 237 ----------------------~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~ 293 (456)
.++|+||+|+++|++ |||+||+|. +++.+++++|+++++ .|.|+|++.. +++|.
T Consensus 246 ~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~-~~~P~~~l~~-~~sPs 322 (439)
T 3i4e_A 246 IDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIH-KQFPGKLLSY-NCSPS 322 (439)
T ss_dssp CCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHH-HHSTTCEEEE-ECCSS
T ss_pred cccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhc-ccCCceEEee-CCCCC
Confidence 579999999999999 999999976 689999999999876 2456788775 57888
Q ss_pred CC-------------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012815 294 LN-------------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (456)
Q Consensus 294 lt-------------~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g 331 (456)
++ .+||+++||++++||++++++++.||.+++++|++.
T Consensus 323 fnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~raa~~A~~~~a~~i~~~ 373 (439)
T 3i4e_A 323 FNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYART 373 (439)
T ss_dssp SCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHHHHHHHh
Confidence 88 889999999999999999999999999999999863
No 12
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=100.00 E-value=1.4e-68 Score=553.71 Aligned_cols=286 Identities=24% Similarity=0.337 Sum_probs=262.7
Q ss_pred cchhhhhcccC-CCCcccccccccC-------CCccccc--cccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcE
Q 012815 43 NTNTLLLNTAT-NPGTINRTRVYRK-------NSTGVEA--CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSF 112 (456)
Q Consensus 43 ~~~~~~~~~~~-~pr~~~~~R~y~~-------~s~~~~~--a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdA 112 (456)
++..++++||. +|||++++||||+ ||++++| ++..+++||++|+.++++++|||||++||++++++||++
T Consensus 9 ~~~~~~~~~w~~~~r~~~i~r~yt~~~v~~lr~s~~~~~~~~~~~a~~lr~lL~~~~~~~~~ga~d~~sA~~~~~aGf~A 88 (429)
T 1f8m_A 9 KSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKA 88 (429)
T ss_dssp CCHHHHHHHHHHCGGGTTCCCSSCHHHHHHHSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHhccCCCcCceeCCCCHHHHHHHhCCccccCchHHHHHHHHHHHHhcCCceecCCCCCHHHHHHHHHcCCCE
Confidence 34557888998 9999999999995 9999998 678899999999999999999999999999999999999
Q ss_pred EEecchHHhh----hhcccCCCCCCCHHHHHHHHHHHHhcc----------------C--CcEEEeCCCCCCCHHHHHHH
Q 012815 113 CFTSGFSISA----ARLALPDTGFISYGEMVDQGQLITQAV----------------S--IPVIGDGDNGYGNAMNVKRT 170 (456)
Q Consensus 113 I~vSG~avSa----s~lG~PD~~~lt~~Eml~~~r~I~ra~----------------~--iPVIaD~DtGYG~~~nv~rt 170 (456)
||+|||++|+ +.+|+||.+++|++||+.++++|++++ + +|||||+|+|||++.||+++
T Consensus 89 iy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~~~d~~~PIiaD~DtGfG~~~nv~~t 168 (429)
T 1f8m_A 89 IYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGGALNVYEL 168 (429)
T ss_dssp EEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTTTSSHHHHHHH
T ss_pred EEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCCCCEEEECCCCCCCcHHHHHH
Confidence 9999999997 468999999999999999999999986 4 99999999999999999999
Q ss_pred HHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc-------------
Q 012815 171 VKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA------------- 236 (456)
Q Consensus 171 Vk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~------------- 236 (456)
||+|+++||+|||||||+ +||+|||++||+|+|.+|+++||+||++|++++|+||+||||||++++
T Consensus 169 vk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d~~ 248 (429)
T 1f8m_A 169 QKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQP 248 (429)
T ss_dssp HHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTTGG
T ss_pred HHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccccc
Confidence 999999999999999999 799999999999999999999999999999988999999999999763
Q ss_pred ---------------ccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-----
Q 012815 237 ---------------LSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPLVPKMANMLEGGGKTPILN----- 295 (456)
Q Consensus 237 ---------------~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt----- 295 (456)
.++|+||+|+++|++ |||+||+|+ +++.+++++|+++++. ..|.|++.. +.+|.++
T Consensus 249 fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~-~~P~~~La~-n~sPsf~w~~~~ 325 (429)
T 1f8m_A 249 FITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA-EYPDQMLAY-NCSPSFNWKKHL 325 (429)
T ss_dssp GEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT-TCTTCEEEE-ECCTTSCHHHHC
T ss_pred cccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc-cCCCceeec-CCCCCCCccccc
Confidence 689999999999999 999999995 8999999999998762 123344443 3578888
Q ss_pred --------HHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcC
Q 012815 296 --------PLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGG 331 (456)
Q Consensus 296 --------~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g 331 (456)
.+||+++||++++||++++++++.||.++++.|++.
T Consensus 326 ~~~~~~~f~~eL~~lG~~~v~~~l~~~raa~~a~~~~a~~~~~~ 369 (429)
T 1f8m_A 326 DDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQN 369 (429)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHhHHHHHHHHcCCeEEEECcHHHHHHHHHHHHHHHHHHHc
Confidence 699999999999999999999999999999999863
No 13
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=100.00 E-value=9.3e-68 Score=526.80 Aligned_cols=282 Identities=26% Similarity=0.399 Sum_probs=231.4
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEE
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVI 154 (456)
+.++++||++|++++++++|||||++||++++++||++||+||+++++ ++|+||++.+|++||++|+++|++++++|||
T Consensus 5 ~~~~~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~-~lG~pD~~~vt~~em~~~~~~I~~~~~~Pvi 83 (295)
T 1s2w_A 5 VKKTTQLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSA-QLGVRDSNEASWTQVVEVLEFMSDASDVPIL 83 (295)
T ss_dssp CCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHH-TC---------CHHHHHHHHHHHHTCSSCEE
T ss_pred hhHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 567899999999999999999999999999999999999999999986 6999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCC--ccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRG--RKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~g--k~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
+|+|+|||+++++.+++++|+++||+|||||||.+||+|||+++ |+|+|++|+++||+|+++|+. +++|+|+||||
T Consensus 84 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~--~~~~~i~aRtd 161 (295)
T 1s2w_A 84 LDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT--DPDFCIVARVE 161 (295)
T ss_dssp EECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--STTCEEEEEEC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--cCCcEEEEeeh
Confidence 99999999999999999999999999999999999999999986 899999999999999999986 47999999999
Q ss_pred hh-hcccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHhcCCCEEec
Q 012815 233 SR-QALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (456)
Q Consensus 233 A~-~~~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~ 309 (456)
++ +..+++++|+||++|++||||+||+|+ +++.+++++|+++++. +|+++|+.++ +..+.+||+++||++|+|
T Consensus 162 a~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~----~~~~~~eL~~lGv~~v~~ 237 (295)
T 1s2w_A 162 AFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKY----YKTPTDHFRDMGVSMVIW 237 (295)
T ss_dssp TTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTT----TTSCHHHHHHHTCCEEEE
T ss_pred HHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCC----CCCCHHHHHHcCCcEEEE
Confidence 98 678899999999999999999999997 7888999999999863 7888886543 335799999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHcccc
Q 012815 310 PLSLIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYAT 363 (456)
Q Consensus 310 p~~ll~aa~~A~~~~l~~i~~-g~~~-~~~~~~~~~e~~~lvg~~~~~~~e~~y~~ 363 (456)
|++++++++.||++++++|++ |... ..+.+++++|+++++||++|+++|++|.+
T Consensus 238 ~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 293 (295)
T 1s2w_A 238 ANHNLRASVSAIQQTTKQIYDDQSLVNVEDKIVSVKEIFRLQRDDELVQAEDKYLP 293 (295)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSSSTTTGGGSCCHHHHHHC---------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHcCCccchhhcCCCHHHHHHhcCHHHHHHHHHhhcc
Confidence 999999999999999999986 5443 34678899999999999999999999964
No 14
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=100.00 E-value=6.1e-61 Score=473.66 Aligned_cols=260 Identities=28% Similarity=0.375 Sum_probs=237.0
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.++++||++|++ + +++|||||++||++++++||++||+||+++++ ++|+||++.+|++||++|+++|++++++||++
T Consensus 5 ~~~~~lr~l~~~-~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~-~~G~pD~~~vt~~em~~~~~~I~~~~~~pvia 81 (275)
T 2ze3_A 5 DHARSFHALHQT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH-ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNA 81 (275)
T ss_dssp HHHHHHHHHHHH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHH-HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHhhC-C-eeEecccCHHHHHHHHHcCCCEEEECcHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEe
Confidence 467899999986 5 99999999999999999999999999999986 69999999999999999999999999999999
Q ss_pred eCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 156 DGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 156 D~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
|+|+||| +++|+.+++++|+++||+|||||||.+ | .+|+|+|.+|+++||+|+++|++++|.+|+|+||||++
T Consensus 82 D~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~-----~-~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~ 155 (275)
T 2ze3_A 82 DIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG-----L-TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTF 155 (275)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS-----S-SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTT
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC-----C-CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhh
Confidence 9999999 689999999999999999999999974 5 67899999999999999999999888999999999997
Q ss_pred hc-------ccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 235 QA-------LSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 235 ~~-------~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
.. .+++++|+|+++|++||||+||+|++++.+++++|+++++ +|+ |++.. +|.++.+||+++||++|
T Consensus 156 ~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P~--n~~~~---~~~~~~~eL~~lGv~~v 229 (275)
T 2ze3_A 156 LKGHGATDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALR-VPL--NVMAF---PGSPVPRALLDAGAARV 229 (275)
T ss_dssp TTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS-SCE--EEECC---TTSCCHHHHHHTTCSEE
T ss_pred hccccccchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC-CCE--EEecC---CCCCCHHHHHHcCCcEE
Confidence 54 3799999999999999999999999999999999999987 665 66643 36789999999999999
Q ss_pred eccchHHHHHHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHhcC
Q 012815 308 AYPLSLIGVSVRAMQDALTAIKGGRIPSPGS--MPSFQEIKETLG 350 (456)
Q Consensus 308 s~p~~ll~aa~~A~~~~l~~i~~g~~~~~~~--~~~~~e~~~lvg 350 (456)
+||+++++++++||++++++|++.++..... +++|+|+++++|
T Consensus 230 ~~~~~~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~ 274 (275)
T 2ze3_A 230 SFGQSLMLATLGLVQRMAAELHAAEQSPLMDSYFLGFGEGHDLFH 274 (275)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHCHHHHHHHH
T ss_pred EEChHHHHHHHHHHHHHHHHHHHhCCcccccccCCCHHHHHHHhc
Confidence 9999999999999999999998633443333 378999988875
No 15
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.7e-57 Score=444.72 Aligned_cols=241 Identities=26% Similarity=0.313 Sum_probs=222.7
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.++++||++|++++++++|||||++||++++++||++||+||+++++ ++|+||++.+|++||++|+++|++++++||++
T Consensus 7 ~~~~~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~-~~G~pD~~~vt~~em~~~~~~I~r~~~~pvia 85 (255)
T 2qiw_A 7 SLATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD-ATGSSDGENMNFADYMAVVKKITSAVSIPVSV 85 (255)
T ss_dssp HHHHHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHH-HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred hHHHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHH-hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEe
Confidence 56789999999999999999999999999999999999999999986 69999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~ 235 (456)
|+|+|||+.. .+++++|+++||+|||||||. |..+|+++|.+|+++||++++++++++|.+|+|+||||++.
T Consensus 86 D~~~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~------~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~ 157 (255)
T 2qiw_A 86 DVESGYGLSP--ADLIAQILEAGAVGINVEDVV------HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVK 157 (255)
T ss_dssp ECTTCTTCCH--HHHHHHHHHTTCCEEEECSEE------GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHH
T ss_pred ccCCCcCcHH--HHHHHHHHHcCCcEEEECCCC------CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhh
Confidence 9999999765 999999999999999999996 77889999999999999999999998889999999999963
Q ss_pred ------cccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEec
Q 012815 236 ------ALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (456)
Q Consensus 236 ------~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~ 309 (456)
.++++++|+|+++|++||||+||+|++++.+++++|+++++ +|+.+++.+ ++++|.++.+||+++||++|||
T Consensus 158 ~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~-~P~n~~~~~-~~~~p~~~~~eL~~lGv~~v~~ 235 (255)
T 2qiw_A 158 LGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVS-VPVNITAHP-VDGHGAGDLATLAGLGVRRVTF 235 (255)
T ss_dssp HCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCS-SCBEEECBT-TTBBTTBCHHHHHHTTCCEEEC
T ss_pred ccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCC-CCEEEEecC-CCCCCCCCHHHHHHcCCCEEEE
Confidence 24699999999999999999999999999999999999987 676444333 2568999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHcC
Q 012815 310 PLSLIGVSVRAMQDALTAIKGG 331 (456)
Q Consensus 310 p~~ll~aa~~A~~~~l~~i~~g 331 (456)
|++ +++||++++++|+++
T Consensus 236 ~~~----a~~a~~~~~~~i~~~ 253 (255)
T 2qiw_A 236 GPL----WQKWLAATSAQQLKG 253 (255)
T ss_dssp TTH----HHHHHHHHHHHHHGG
T ss_pred HHH----HHHHHHHHHHHHHhc
Confidence 999 999999999999864
No 16
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=100.00 E-value=2.2e-60 Score=502.46 Aligned_cols=279 Identities=22% Similarity=0.252 Sum_probs=246.1
Q ss_pred chhhhhcccCCCCcccccccccC-------CCccccc-cccHHHHHHHHH----hCCCceeecccCChHHHHHHHHhCCc
Q 012815 44 TNTLLLNTATNPGTINRTRVYRK-------NSTGVEA-CLSPAKSLRQIL----ELPGVHQGPACFDALSAKLVEKSGFS 111 (456)
Q Consensus 44 ~~~~~~~~~~~pr~~~~~R~y~~-------~s~~~~~-a~~~a~~Lr~ll----~~~~~lv~pgayDalSArl~e~aGfd 111 (456)
+..++++||.+|||++|+||||+ ||++++| ++..+++||+++ +.++++++|||||++||++++ .||+
T Consensus 14 ~~~~~~~~w~~~R~~~i~rpYta~~v~~~rGs~~~~~~~~~~a~kL~~~lr~l~~~~~~l~~pga~D~~sA~~~~-~gf~ 92 (538)
T 1dqu_A 14 EVAAVKNWWKDSRWRYTKRPFTAEQIVAKRGNLKIEYPSNVQAKKLWGILERNFKNKEASFTYGCLDPTMVTQMA-KYLD 92 (538)
T ss_dssp HHHHHHHHHTSGGGGGCCCSSCHHHHHHHCCSSCCCCTHHHHHHHHHHHHHHHHHHTCCEEEEBCCSHHHHHHHH-HHCS
T ss_pred HHHHHHHHhcCccccCccCCCCHHHHHHHcCCCCCccchhHHHHHHHHHHHHhhccCCcEEecCCCCHHHHHHHH-hcCC
Confidence 44578999999999999999995 9999999 555565555555 478899999999999999998 7999
Q ss_pred EEEecchHHhhhh----cccCCCCCCCHHHHHHHHHHHHhc-------------------------cC--CcEEEeCCCC
Q 012815 112 FCFTSGFSISAAR----LALPDTGFISYGEMVDQGQLITQA-------------------------VS--IPVIGDGDNG 160 (456)
Q Consensus 112 AI~vSG~avSas~----lG~PD~~~lt~~Eml~~~r~I~ra-------------------------~~--iPVIaD~DtG 160 (456)
+||+|||++|++. +|+||.+++|++||+.++++|+++ ++ +|||||+|+|
T Consensus 93 Aiy~SG~~vAas~~~~~~G~PD~~~~~~~ev~~~v~~I~~a~~~~D~~q~~~r~~~~~~~~~~~~~~d~~lPIiaD~DtG 172 (538)
T 1dqu_A 93 TVYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNHLWMAQLFHDRKQREERMTTPKDQRHKVANVDYLRPIIADADTG 172 (538)
T ss_dssp CEEECHHHHHHHCCTTCCCCSSCSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHTTSCCCCCCCCEEEECTTC
T ss_pred eeecccHHHHhhcccccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhhhccccccCcCCceEEecCCc
Confidence 9999999999653 499999999999999999999988 77 9999999999
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
||++.||+++||.|+++||+|||||||+ .||+|||++||+|+|.+|+++||+||++|++++|+||+|+||||++...++
T Consensus 173 fG~~~nv~~tvk~~ieAGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~AAr~A~d~~g~d~vIiARTDA~~~~~l 252 (538)
T 1dqu_A 173 HGGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGTDLLAIARTDSEAATLI 252 (538)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEECSBCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGEEEE
T ss_pred CCchHHHHHHHHHHHHcCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccccccCH
Confidence 9999999999999999999999999999 499999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHhH--------hcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh--cCC-
Q 012815 240 EESLR-RSRAFA--------DAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE--LGF- 304 (456)
Q Consensus 240 deAI~-RakAy~--------eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e--lGv- 304 (456)
+++|+ |+++|. +||||+ |+++. .+.+++.+|++++. .++|++. +|....++|.+ .|+
T Consensus 253 ~~aI~~R~~ay~~G~~~~~~~AGAD~-~~~~~~~G~~~~ei~~~~~~~~---~~~nl~~----~~e~~~~~l~~~~~g~~ 324 (538)
T 1dqu_A 253 TSTIDHRDHPFIIGSTNPDIQPLNDL-MVMAEQAGKNGAELQAIEDEWL---AKAGLKL----FNDAVVDAINNSPLPNK 324 (538)
T ss_dssp SCTTCGGGGGGEEEECCTTSCCHHHH-HHHHHHSCCCSHHHHHHHHHHH---HHSCEEC----SHHHHHHHHHTSSCSCH
T ss_pred HHHHHHHHHHHHhcCCCCCCccchHH-HHHHHhcCCCHHHHHHHHHHhc---CCCceEe----cchHHHHHHHhcccCcc
Confidence 99999 999999 999999 88864 67789999999864 3466664 45567799988 888
Q ss_pred --CEEeccchHHHHHHHHHHHHHHHHHcC
Q 012815 305 --KLVAYPLSLIGVSVRAMQDALTAIKGG 331 (456)
Q Consensus 305 --~~Vs~p~~ll~aa~~A~~~~l~~i~~g 331 (456)
++++|.+++.++++.+|+..++.|.+.
T Consensus 325 ~~~~~~y~~~~~r~s~~~~r~~A~~i~g~ 353 (538)
T 1dqu_A 325 KAAIEKYLTQSKGKSNLEARAIAKEIAGT 353 (538)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHcCC
Confidence 999999999999999999999999754
No 17
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=100.00 E-value=6.6e-40 Score=323.23 Aligned_cols=234 Identities=16% Similarity=0.230 Sum_probs=181.0
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC-CcEE
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVI 154 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~-iPVI 154 (456)
...+||++|+++++++||||||+.||++++++|||+|+++ |.+ ++++|+||++.+|++||++|+++|+++++ .||+
T Consensus 17 t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~--~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vv 94 (275)
T 3vav_A 17 TVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLG--NVLQGQTTTLPVTLDDIAYHTACVARAQPRALIV 94 (275)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEECTTHH--HHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEE
T ss_pred CHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHH--HHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEE
Confidence 4678999999999999999999999999999999999877 444 45799999999999999999999999995 9999
Q ss_pred EeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCC------------CCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 155 GDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSP------------KGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 155 aD~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~p------------K~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
+|+|+| |++++++.+++++++++||+|||||||..+ |+|||.+ ++|+.+ +.+
T Consensus 95 aD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlg---ltPq~~------------~~~ 159 (275)
T 3vav_A 95 ADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVG---LTPQSV------------HAF 159 (275)
T ss_dssp EECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEE---SCGGGH------------HHH
T ss_pred EecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEecC---CCceEE------------ecc
Confidence 999996 999999999999999999999999999887 9999987 556542 112
Q ss_pred CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-CCCHHHHH
Q 012815 222 GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELE 300 (456)
Q Consensus 222 G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~ 300 (456)
++|+|++|||+.+ +++|+||++|++||||+||+|++++. ++++|+++++ +|++ -+=.++++-. -|=..|+-
T Consensus 160 -gg~~vqgrt~~~a----~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l~-iP~i-gIGaG~~cdgQvLv~~D~l 231 (275)
T 3vav_A 160 -GGFKVQGKTEAGA----AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRELS-IPTI-GIGAGAECSGQVLVLHDML 231 (275)
T ss_dssp -C---CCCCSHHHH----HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHCS-SCEE-EESSCSCSSEEEECHHHHT
T ss_pred -CCeEEEcCCHHHH----HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhCC-CCEE-EEccCCCCCceeeeHhhhc
Confidence 4899999999865 89999999999999999999999985 9999999987 7764 2212111100 11234432
Q ss_pred hcCCC----EEe-ccchHHHHHHHHHHHHHHHHHcCCCCCC
Q 012815 301 ELGFK----LVA-YPLSLIGVSVRAMQDALTAIKGGRIPSP 336 (456)
Q Consensus 301 elGv~----~Vs-~p~~ll~aa~~A~~~~l~~i~~g~~~~~ 336 (456)
-+.-. .+- |.. +-.....|+++..++.++|.+|.+
T Consensus 232 G~~~~~~pkf~k~y~~-~~~~~~~a~~~y~~~V~~~~fP~~ 271 (275)
T 3vav_A 232 GVFPGKRPRFVKDFMQ-GQPSIFAAVEAYVRAVKDGSFPGP 271 (275)
T ss_dssp TCSCSCCCTTCCCCCT-TCSSHHHHHHHHHHHHHHTCSSCG
T ss_pred CCCCCCCCCcchhhhh-hHHHHHHHHHHHHHHHhcCCCCCC
Confidence 22101 000 111 112246777777788888877654
No 18
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=100.00 E-value=1.1e-36 Score=299.03 Aligned_cols=230 Identities=13% Similarity=0.151 Sum_probs=180.7
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC-CcEEE
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVIG 155 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~-iPVIa 155 (456)
..++||++++++++++||||||+.||++++++|||+|+++ .+++++++|+||++.+|++||++|+++|+|+++ .||++
T Consensus 5 t~~~lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilvG-dsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vva 83 (264)
T 1m3u_A 5 TISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVG-DSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLA 83 (264)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEEC-TTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEEC-HHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEE
Confidence 3678999999999999999999999999999999999997 233345799999999999999999999999997 57899
Q ss_pred eCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh--------------Hh
Q 012815 156 DGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR--------------KE 220 (456)
Q Consensus 156 D~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar--------------~~ 220 (456)
|+++| |++++++.+++++++++||+|||||||. |++++|+++++++ +.
T Consensus 84 D~pfgsy~~~~~a~~~a~rl~kaGa~aVklEgg~-----------------e~~~~I~al~~agipV~gHiGLtPq~v~~ 146 (264)
T 1m3u_A 84 DLPFMAYATPEQAFENAATVMRAGANMVKIEGGE-----------------WLVETVQMLTERAVPVCGHLGLTPQSVNI 146 (264)
T ss_dssp ECCTTSSSSHHHHHHHHHHHHHTTCSEEECCCSG-----------------GGHHHHHHHHHTTCCEEEEEESCGGGHHH
T ss_pred ECCCCCcCCHHHHHHHHHHHHHcCCCEEEECCcH-----------------HHHHHHHHHHHCCCCeEeeecCCceeecc
Confidence 99995 9988999999999999999999999982 5677888887764 22
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-----
Q 012815 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN----- 295 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt----- 295 (456)
. ++|++++|||+.+ +++|+||++|++||||+||+|++++ +++++|+++++ +|+. -+- ..|.-+
T Consensus 147 ~-ggf~v~grt~~~a----~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~i--gIG---ag~~~dgQvLV 214 (264)
T 1m3u_A 147 F-GGYKVQGRGDEAG----DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEALA-IPVI--GIG---AGNVTDGQILV 214 (264)
T ss_dssp H-TSSCCCCCSHHHH----HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHCS-SCEE--EES---SCTTSSEEEEC
T ss_pred c-CCeEEEeCCHHHH----HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhCC-CCEE--EeC---CCCCCCcceee
Confidence 3 4899999999865 8999999999999999999999985 79999999987 6753 332 122222
Q ss_pred HHHHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCCC
Q 012815 296 PLELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSPG 337 (456)
Q Consensus 296 ~~eL~elG--v--~~Vs-~p~~ll~aa~~A~~~~l~~i~~g~~~~~~ 337 (456)
..|+--+. + +.+- |. .+......|+++..++.++|.+|.+.
T Consensus 215 ~~D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~~ 260 (264)
T 1m3u_A 215 MHDAFGITGGHIPKFAKNFL-AETGDIRAAVRQYMAEVESGVYPGEE 260 (264)
T ss_dssp HHHHTTCSCSSCCTTCCCSS-TTTSSHHHHHHHHHHHHHHTCSSCGG
T ss_pred HHhhcCCCCCCCCCcchhhh-hhHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 34432221 1 1111 11 01222466777777778888777543
No 19
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=100.00 E-value=2e-35 Score=291.27 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=170.6
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC-CcEE
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVI 154 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~-iPVI 154 (456)
..++||++++++++++||||||+.||++++++|||+|+++ |.++ +++|+||+..+|++||++|+++|+|+++ .||+
T Consensus 5 t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~--~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGM--AVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV 82 (275)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHH--HTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHH--HHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE
Confidence 3678999999999999999999999999999999999987 4443 4799999999999999999999999998 5688
Q ss_pred EeCCCC-CC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh--------------
Q 012815 155 GDGDNG-YG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR-------------- 218 (456)
Q Consensus 155 aD~DtG-YG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar-------------- 218 (456)
+|+++| |+ +++++.+++++++++||+||||||| +|++++|+++++++
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg-----------------~e~~~~I~al~~agIpV~gHiGLtPQs~ 145 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG-----------------VWMAETTEFLQMRGIPVCAHIGLTPQSV 145 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS-----------------GGGHHHHHHHHHTTCCEEEEEESCGGGT
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc-----------------HHHHHHHHHHHHcCCCeEeeeccCceee
Confidence 999995 86 6899999999999999999999998 26789999999875
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC---
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN--- 295 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt--- 295 (456)
+.+ ++|+|++|| +.+ +++|+||++|++||||+||+|++++ +++++|+++++ +|+. -+-. .|.-+
T Consensus 146 ~~~-ggf~v~grt-~~a----~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~i--gIGa---G~~~dgQv 212 (275)
T 1o66_A 146 FAF-GGYKVQGRG-GKA----QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTETVS-CPTI--GIGA---GADCDGQV 212 (275)
T ss_dssp TC-------------CH----HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHHCS-SCEE--EESS---CSCSSEEE
T ss_pred ccc-CCeEEEeCh-HHH----HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCC-CCEE--EECC---CCCCCcce
Confidence 112 479999999 533 8999999999999999999999985 79999999987 6753 3321 22222
Q ss_pred --HHHHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCCC
Q 012815 296 --PLELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSPG 337 (456)
Q Consensus 296 --~~eL~elG--v--~~Vs-~p~~ll~aa~~A~~~~l~~i~~g~~~~~~ 337 (456)
..|+--+. + +.+- |. .+......|+++..++.++|.+|.+.
T Consensus 213 LV~~D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~~ 260 (275)
T 1o66_A 213 LVMHDMLGIFPGKTAKFVKNFM-QGHDSVQAAVRAYVAEVKAKTFPAAE 260 (275)
T ss_dssp ECHHHHTTCSSSSCCTTCCCSS-TTCSSHHHHHHHHHHHHHHTCSSCGG
T ss_pred eeHHhhcCCCCCCCCCchhhhh-hHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 34432221 1 1111 11 01222556777777788888877654
No 20
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=100.00 E-value=6.4e-35 Score=288.49 Aligned_cols=229 Identities=16% Similarity=0.206 Sum_probs=171.1
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC-CcE
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPV 153 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~-iPV 153 (456)
...++||++++++++++||||||+.||++++++|||+|+++ |.+ ++++|+||++.+|++||++|+++|+|+++ .+|
T Consensus 21 ~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~--~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~v 98 (281)
T 1oy0_A 21 IRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAA--NVVYGYDTTVPISIDELIPLVRGVVRGAPHALV 98 (281)
T ss_dssp CCHHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECTTHH--HHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEE
T ss_pred cCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHH--HHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeE
Confidence 34778999999999999999999999999999999999987 444 45799999999999999999999999997 557
Q ss_pred EEeCCCC-CC-CHHHHHHHHHHHH-HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh------------
Q 012815 154 IGDGDNG-YG-NAMNVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR------------ 218 (456)
Q Consensus 154 IaD~DtG-YG-~~~nv~rtVk~l~-~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar------------ 218 (456)
++|+++| |+ +++++.+++.++. ++||+|||||||. |++++|+++++++
T Consensus 99 vaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~-----------------e~~~~I~al~~agIpV~gHiGLtPq 161 (281)
T 1oy0_A 99 VADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGE-----------------RVAEQIACLTAAGIPVMAHIGFTPQ 161 (281)
T ss_dssp EEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG-----------------GGHHHHHHHHHHTCCEEEEEECCC-
T ss_pred EEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcH-----------------HHHHHHHHHHHCCCCEEeeecCCcc
Confidence 7999995 87 6888877665555 5999999999982 6788888888875
Q ss_pred --HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-
Q 012815 219 --KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN- 295 (456)
Q Consensus 219 --~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt- 295 (456)
+.+ ++|+|++||| .+ +++|+||++|++||||+||+|++++ +++++|+++++ +|+. -+- ..|.-+
T Consensus 162 sv~~~-ggf~v~grt~-~a----~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~-iP~i--gIG---aG~~~dg 228 (281)
T 1oy0_A 162 SVNTL-GGFRVQGRGD-AA----EQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGKLT-IPTV--GIG---AGPNCDG 228 (281)
T ss_dssp --------------CH-HH----HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHHCS-SCEE--EES---SCSCSSE
T ss_pred eeccc-CCeEEEeCcH-HH----HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCC-CCEE--EeC---CCCCCCc
Confidence 122 4799999998 43 8999999999999999999999985 79999999987 6753 332 122222
Q ss_pred ----HHHHHhcC--C--CEEe-ccchHHHHHHHHHHHHHHHHHcCCCCCCC
Q 012815 296 ----PLELEELG--F--KLVA-YPLSLIGVSVRAMQDALTAIKGGRIPSPG 337 (456)
Q Consensus 296 ----~~eL~elG--v--~~Vs-~p~~ll~aa~~A~~~~l~~i~~g~~~~~~ 337 (456)
..|+--+. + +.+- |. .+......|+++..++.++|.+|.+.
T Consensus 229 QvLV~~D~lG~~~~~~pkf~k~y~-~~~~~~~~a~~~y~~~V~~~~fP~~~ 278 (281)
T 1oy0_A 229 QVLVWQDMAGFSGAKTARFVKRYA-DVGGELRRAAMQYAQEVAGGVFPADE 278 (281)
T ss_dssp EEECHHHHTTCSCSCCCTTCCCCC-CHHHHHHHHHHHHHHHHHTTCSSCSC
T ss_pred ceeeHhhhcCCCCCCCCCchhhhh-hhHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 34443332 1 1111 11 13444667888888888888887654
No 21
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.22 E-value=0.00017 Score=71.51 Aligned_cols=224 Identities=21% Similarity=0.240 Sum_probs=140.2
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCC-CCCCHH----HHHHHHHHHHhcc-CC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT-GFISYG----EMVDQGQLITQAV-SI 151 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~-~~lt~~----Eml~~~r~I~ra~-~i 151 (456)
-++|++..+++++++.-++-.++||+.+|+.|.|-|.+=..+-- -+.|.+.. +++++. -+++.++.|.-.+ ++
T Consensus 17 l~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrf-R~~G~~slag~lpygnaN~iv~e~~~evlp~v~~i 95 (286)
T 2p10_A 17 VDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRY-RMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHT 95 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHH-HHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSS
T ss_pred HHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchh-hhcCccchhhhccccCHHHHHHHHHHhhhccCCCC
Confidence 46788888899999999999999999999999998887533332 13477774 455543 2455666777666 79
Q ss_pred cEEEeCCCC--CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcc-------ccCHHHHHHHHHHHHHHhHhhC
Q 012815 152 PVIGDGDNG--YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-------VVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 152 PVIaD~DtG--YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~-------lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
||++=++.- |.+ .-+..+.+.++|++|+ +. +|- .|..+|+- =+..++-++-|+.| ++ +
T Consensus 96 PV~Agv~~~DP~~~---~g~~Le~lk~~Gf~Gv-~N---~pt-vglidG~fr~~LEE~gm~~~~eve~I~~A---~~-~- 162 (286)
T 2p10_A 96 PVLAGVNGTDPFMV---MSTFLRELKEIGFAGV-QN---FPT-VGLIDGLFRQNLEETGMSYAQEVEMIAEA---HK-L- 162 (286)
T ss_dssp CEEEEECTTCTTCC---HHHHHHHHHHHTCCEE-EE---CSC-GGGCCHHHHHHHHHTTCCHHHHHHHHHHH---HH-T-
T ss_pred CEEEEECCcCCCcC---HHHHHHHHHHhCCceE-EE---CCC-cccccchhhhhHhhcCCCHHHHHHHHHHH---HH-C-
Confidence 999876553 333 3344478888999999 53 222 23444321 11223333444333 32 2
Q ss_pred CCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---------C---CHHH----HHHHHH---hCCCCceeee
Q 012815 223 SDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---------A---SKEE----MKAFCE---ISPLVPKMAN 283 (456)
Q Consensus 223 ~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---------~---s~ee----i~~i~~---~v~~vP~~~N 283 (456)
|++-++=++. .+.+++.++||+|+|.+|-. . +.++ ++++.+ ++. |-..-
T Consensus 163 -gL~Ti~~v~~---------~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn--pdviv 230 (286)
T 2p10_A 163 -DLLTTPYVFS---------PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR--DDIII 230 (286)
T ss_dssp -TCEECCEECS---------HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHC--SCCEE
T ss_pred -CCeEEEecCC---------HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC--CCcEE
Confidence 4555554444 25588899999999999754 1 3333 333333 232 22222
Q ss_pred eeccCCCCCCCCHHHH---Hhc--CCCEEeccchHHHHH-HHHHHHHHHHHHc
Q 012815 284 MLEGGGKTPILNPLEL---EEL--GFKLVAYPLSLIGVS-VRAMQDALTAIKG 330 (456)
Q Consensus 284 ~~~~~g~tp~lt~~eL---~el--Gv~~Vs~p~~ll~aa-~~A~~~~l~~i~~ 330 (456)
+..+ | |.-+++|. -++ |..-+.-++++.++- -+++.+..+++|.
T Consensus 231 Lc~g-G--pIstpeDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 231 LSHG-G--PIANPEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp EEES-T--TCCSHHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecC-C--CCCCHHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 3333 2 34455554 455 888888888888876 6677777777775
No 22
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.05 E-value=7.8e-05 Score=69.31 Aligned_cols=174 Identities=17% Similarity=0.213 Sum_probs=106.3
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
.|+.++++|++++.++... . .+ ......+..++.+++.+++||++.. |..++.. ++.+.++||+
T Consensus 38 ~a~~~~~~G~d~i~v~~~~--~--~~------~~~~~~~~~i~~i~~~~~ipvi~~g--~i~~~~~----~~~~~~~Gad 101 (253)
T 1h5y_A 38 MAVRYEEEGADEIAILDIT--A--AP------EGRATFIDSVKRVAEAVSIPVLVGG--GVRSLED----ATTLFRAGAD 101 (253)
T ss_dssp HHHHHHHTTCSCEEEEECC--C--CT------TTHHHHHHHHHHHHHHCSSCEEEES--SCCSHHH----HHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEEEeCC--c--cc------cCCcccHHHHHHHHHhcCCCEEEEC--CCCCHHH----HHHHHHcCCC
Confidence 4677888999999887421 0 11 1234556778888888899999853 3344433 4667779999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCC--------------eEEEEecchhhcccHHHHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD--------------IVIVARTDSRQALSLEESLRRS 246 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~d--------------fvIiARTDA~~~~~ldeAI~Ra 246 (456)
+|+|-... +..++ .+.++ ++. .|.+ +.+..|.... ......++++
T Consensus 102 ~V~i~~~~------------~~~~~-~~~~~---~~~---~g~~~i~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~e~~ 160 (253)
T 1h5y_A 102 KVSVNTAA------------VRNPQ-LVALL---ARE---FGSQSTVVAIDAKWNGEYYEVYVKGGRE--ATGLDAVKWA 160 (253)
T ss_dssp EEEESHHH------------HHCTH-HHHHH---HHH---HCGGGEEEEEEEEECSSSEEEEETTTTE--EEEEEHHHHH
T ss_pred EEEEChHH------------hhCcH-HHHHH---HHH---cCCCcEEEEEEeecCCCcEEEEEeCCee--cCCCCHHHHH
Confidence 99996532 11112 22222 111 1222 1222221110 0001346778
Q ss_pred HHhHhcCCCEEEeccCC--------CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 247 RAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 247 kAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+.+.++|||.|++..+. +.+.++++.+..+ +|+.++ +|-+..-+..++.+.|+.-|..+..++..
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~-~pvia~----GGi~~~~~~~~~~~~Ga~~v~vgsal~~~ 233 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVR-IPVIAS----GGAGRVEHFYEAAAAGADAVLAASLFHFR 233 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcC-CCEEEe----CCCCCHHHHHHHHHcCCcHHHHHHHHHcC
Confidence 88999999999986532 5678888888765 677654 34432234567778899999999887764
No 23
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.86 E-value=0.00016 Score=68.16 Aligned_cols=191 Identities=15% Similarity=0.164 Sum_probs=111.8
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
|+.++++|++.+.+.... + ........+..++.+++.+++||++. .|.-++. .++.+.++||++
T Consensus 36 a~~~~~~Gad~i~v~d~~--~--------~~~~~~~~~~~i~~i~~~~~ipvi~~--ggI~~~~----~~~~~~~~Gad~ 99 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDIT--A--------SVEKRKTMLELVEKVAEQIDIPFTVG--GGIHDFE----TASELILRGADK 99 (253)
T ss_dssp HHHHHHTTCCEEEEEESS--C--------SSSHHHHHHHHHHHHHTTCCSCEEEE--SSCCSHH----HHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEEECCc--h--------hhcCCcccHHHHHHHHHhCCCCEEEe--CCCCCHH----HHHHHHHcCCCE
Confidence 677889999999887421 0 01133456777888999899999985 2333443 356777899999
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCC---eEEEEec-ch---hhcccHH-----HHHHHHHHh
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD---IVIVART-DS---RQALSLE-----ESLRRSRAF 249 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~d---fvIiART-DA---~~~~~ld-----eAI~RakAy 249 (456)
|++-... +-.++ .+.++ .+. .|.+ +-+-.++ +. ....+.+ ..++.++.+
T Consensus 100 V~lg~~~------------l~~p~-~~~~~---~~~---~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 100 VSINTAA------------VENPS-LITQI---AQT---FGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp EEESHHH------------HHCTH-HHHHH---HHH---HCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred EEEChHH------------HhChH-HHHHH---HHH---cCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 9984331 11112 22222 221 1222 2222321 00 0001111 246778888
Q ss_pred HhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHH
Q 012815 250 ADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAM 321 (456)
Q Consensus 250 ~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~ 321 (456)
.++|++.|++.+. .+.+.++++.+.++ +|+.++ +|-...-+..++.+.|+.-|..+..++.... -.
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~-~~ 234 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHFREI-DV 234 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTTCS-CH
T ss_pred HHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCChHHHHHHHHHcCCC-CH
Confidence 8999999998643 24678888888765 777654 3432112456677889999999988776521 13
Q ss_pred HHHHHHHHcCCC
Q 012815 322 QDALTAIKGGRI 333 (456)
Q Consensus 322 ~~~l~~i~~g~~ 333 (456)
.++.+.+++.+.
T Consensus 235 ~~~~~~l~~~g~ 246 (253)
T 1thf_D 235 RELKEYLKKHGV 246 (253)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 444445554433
No 24
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.76 E-value=0.00029 Score=66.47 Aligned_cols=176 Identities=15% Similarity=0.135 Sum_probs=106.0
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-|+.++++|++++.++... .........+..++.|++.+++||++. .|+-+. +.++.+.++||+
T Consensus 36 ~a~~~~~~Gad~i~v~d~~----------~~~~~~~~~~~~i~~i~~~~~iPvi~~--Ggi~~~----~~~~~~~~~Gad 99 (252)
T 1ka9_F 36 AARAYDEAGADELVFLDIS----------ATHEERAILLDVVARVAERVFIPLTVG--GGVRSL----EDARKLLLSGAD 99 (252)
T ss_dssp HHHHHHHHTCSCEEEEECC----------SSTTCHHHHHHHHHHHHTTCCSCEEEE--SSCCSH----HHHHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEEEcCC----------ccccCccccHHHHHHHHHhCCCCEEEE--CCcCCH----HHHHHHHHcCCC
Confidence 3567788999998877321 111234556777899999999999995 233343 345566778999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE---EEEecc----hhhcccH-----HHHHHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV---IVARTD----SRQALSL-----EESLRRSRA 248 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv---IiARTD----A~~~~~l-----deAI~RakA 248 (456)
+|+|-... +-.+ +.+.++.. .. +.+.+ +-.+++ -....+. ...+++++.
T Consensus 100 ~V~lg~~~------------l~~p-~~~~~~~~---~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 160 (252)
T 1ka9_F 100 KVSVNSAA------------VRRP-ELIRELAD---HF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVK 160 (252)
T ss_dssp EEEECHHH------------HHCT-HHHHHHHH---HH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred EEEEChHH------------HhCc-HHHHHHHH---Hc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHH
Confidence 99995432 1111 22333322 21 21211 112211 0000111 124677888
Q ss_pred hHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 249 FADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 249 y~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+.++||+.+++... .+.+.++++.+.++ +|+.++ +|-...-...++.+.|+.-|+.+..++..
T Consensus 161 ~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 161 GVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 88899999988642 24778889988876 787654 34321123466777899999999887765
No 25
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.73 E-value=0.0027 Score=60.62 Aligned_cols=199 Identities=19% Similarity=0.147 Sum_probs=117.7
Q ss_pred ccHHHHHHHHH-hCCCceeecccCC----------hHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHH
Q 012815 75 LSPAKSLRQIL-ELPGVHQGPACFD----------ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQ 143 (456)
Q Consensus 75 ~~~a~~Lr~ll-~~~~~lv~pgayD----------alSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r 143 (456)
|..-+.+.+.+ .+++.++-.=+++ .--|+.++++|..++-+++ .+.++
T Consensus 4 ~~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------------~~~i~ 62 (232)
T 3igs_A 4 MSLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIEG---------------------IDNLR 62 (232)
T ss_dssp CCHHHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEES---------------------HHHHH
T ss_pred HHHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEECC---------------------HHHHH
Confidence 44555666666 2345555555565 5567778888988776521 34568
Q ss_pred HHHhccCCcEEEeCCCCCCCH----HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 144 LITQAVSIPVIGDGDNGYGNA----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 144 ~I~ra~~iPVIaD~DtGYG~~----~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
.|.+.+++||+...-..||+. ....+.++++.++||+.|.+ |.. +.+. + ...++++++++.
T Consensus 63 ~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l-~~~----~~~~---p-~~l~~~i~~~~~------ 127 (232)
T 3igs_A 63 MTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAV-DGT----ARQR---P-VAVEALLARIHH------ 127 (232)
T ss_dssp HHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE-ECC----SSCC---S-SCHHHHHHHHHH------
T ss_pred HHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEE-Ccc----ccCC---H-HHHHHHHHHHHH------
Confidence 888999999997554444431 01234567788999999988 432 1111 1 123445444322
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe--cc--------CCCHHHHHHHHHhCCCCceeeeeeccCC
Q 012815 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI--DA--------LASKEEMKAFCEISPLVPKMANMLEGGG 289 (456)
Q Consensus 220 ~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi--e~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g 289 (456)
. +..+.+-.. .. +.++...++|||.|.+ .+ .++.+.++++.+. . +|+..+ +|
T Consensus 128 -~--g~~v~~~v~-----t~----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~-ipvIA~----GG 189 (232)
T 3igs_A 128 -H--HLLTMADCS-----SV----DDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-G-CRVIAE----GR 189 (232)
T ss_dssp -T--TCEEEEECC-----SH----HHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-T-CCEEEE----SC
T ss_pred -C--CCEEEEeCC-----CH----HHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-C-CcEEEE----CC
Confidence 1 344554322 22 3456678999999953 21 2466788888876 4 777643 34
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHH
Q 012815 290 KTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAI 328 (456)
Q Consensus 290 ~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i 328 (456)
-...-...++.++|+.-|..|..+++ .....+...+.|
T Consensus 190 I~t~~d~~~~~~~GadgV~VGsal~~-p~~~~~~~~~~i 227 (232)
T 3igs_A 190 YNSPALAAEAIRYGAWAVTVGSAITR-LEHICGWYNDAL 227 (232)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEehHhcC-HHHHHHHHHHHH
Confidence 21112346677889999999987775 333444444444
No 26
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=97.70 E-value=0.00062 Score=66.85 Aligned_cols=122 Identities=24% Similarity=0.316 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 84 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVA--------VGTTGESPTLSHEEHKKVIEKVVDVVN---GRVQVIAGAGS---NCTEEA 84 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---CCHHHH
Confidence 5677889999999999999988 566666677899999988888887754 35666666543 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.| -.++++.+.++
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 150 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN-LPIVLYNV---PSRTAVNLEPKTVKLL 150 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999877442 4655555 4555665 67653 43 2221 24676655544
No 27
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=97.69 E-value=0.00064 Score=66.88 Aligned_cols=122 Identities=17% Similarity=0.226 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 84 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILV--------CGTTGESPTLTFEEHEKVIEFAVKRAA---GRIKVIAGTGG---NATHEA 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5567889999999999999988 566666677899999988888887754 35566666543 357899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|+++ |+ |+.| -.++++.+.++
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 150 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD-IPIIIYNI---PSRTCVEISVDTMFKL 150 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---CcccCcCCCHHHHHHH
Confidence 99999999999999877442 4656555 4555665 67643 43 2222 14677665554
No 28
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.68 E-value=0.0023 Score=61.04 Aligned_cols=196 Identities=15% Similarity=0.105 Sum_probs=115.4
Q ss_pred cHHHHHHHHH-hCCCceeecccCC----------hHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHH
Q 012815 76 SPAKSLRQIL-ELPGVHQGPACFD----------ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll-~~~~~lv~pgayD----------alSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~ 144 (456)
..-+.+.+.+ .+++.++-.=+++ .--|+.++++|..+|-+++ .+..+.
T Consensus 5 ~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------------~~~i~~ 63 (229)
T 3q58_A 5 SLLARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEG---------------------IENLRT 63 (229)
T ss_dssp HHHHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEES---------------------HHHHHH
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEECC---------------------HHHHHH
Confidence 3344555655 2344555555555 5567778888998876521 345688
Q ss_pred HHhccCCcEEEeCCCCCCC-H---HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 145 ITQAVSIPVIGDGDNGYGN-A---MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 145 I~ra~~iPVIaD~DtGYG~-~---~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
|.+.+++||+...-..|++ . ....+.++++.++||+.|.+ |.. +.+. + ....+++++++.
T Consensus 64 ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l-~~~----~~~~---p-~~l~~~i~~~~~------- 127 (229)
T 3q58_A 64 VRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAF-DAS----FRSR---P-VDIDSLLTRIRL------- 127 (229)
T ss_dssp HGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE-ECC----SSCC---S-SCHHHHHHHHHH-------
T ss_pred HHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEE-Ccc----ccCC---h-HHHHHHHHHHHH-------
Confidence 8899999999655333332 0 11234567788999999988 432 1111 1 133455554432
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe--cc--------CCCHHHHHHHHHhCCCCceeeeeeccCCC
Q 012815 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI--DA--------LASKEEMKAFCEISPLVPKMANMLEGGGK 290 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi--e~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~ 290 (456)
. +..+.+-+. .. +.++...++|||.|.+ .+ .++.+.++++.+. .+|+..+ +|-
T Consensus 128 ~--g~~v~~~v~-----t~----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~----GGI 190 (229)
T 3q58_A 128 H--GLLAMADCS-----TV----NEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAE----GRY 190 (229)
T ss_dssp T--TCEEEEECS-----SH----HHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEE----SSC
T ss_pred C--CCEEEEecC-----CH----HHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEE----CCC
Confidence 1 345555332 22 3456678899999953 21 2566788888876 3777643 342
Q ss_pred CCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHH
Q 012815 291 TPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALT 326 (456)
Q Consensus 291 tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~ 326 (456)
...-...++.++|+.-|..|..+++. ....+...+
T Consensus 191 ~t~~d~~~~~~~GadgV~VGsai~~p-~~~~~~f~~ 225 (229)
T 3q58_A 191 NTPALAANAIEHGAWAVTVGSAITRI-EHICQWFSH 225 (229)
T ss_dssp CSHHHHHHHHHTTCSEEEECHHHHCH-HHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchHhcCh-HHHHHHHHH
Confidence 11122456778899999999777753 333333333
No 29
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=97.63 E-value=0.0011 Score=65.75 Aligned_cols=122 Identities=19% Similarity=0.260 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~st~~a 100 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVL--------AGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVGT---NNTRTS 100 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCCC---CCHHHH
Confidence 5577889999999999999988 566666677899999988888887754 35666666543 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE-VPICLYDI---PGRSGIPIESDTMRRL 166 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999877442 4555554 4555665 67643 43 2222 24777766665
No 30
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=97.62 E-value=0.00089 Score=66.38 Aligned_cols=122 Identities=17% Similarity=0.345 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v--------~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 99 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVV--------SGTTGESPTTTDGEKIELLRAVLEAVG---DRARVIAGAGT---YDTAHS 99 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEeCCC---CCHHHH
Confidence 5678899999999999999988 555666677889999888888888764 35666665533 457999
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|+ |+.+ -.++++.+.++
T Consensus 100 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATE-LPMLLYDI---PGRSAVPIEPDTIRAL 165 (304)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCS-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999987543 4555554 4445554 6764 332 2211 24666555544
No 31
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=97.62 E-value=0.00035 Score=68.69 Aligned_cols=124 Identities=23% Similarity=0.305 Sum_probs=88.7
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
| =|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pvi~Gvg~---~~t 82 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIV--------CGTTGEATTMTETERKETIKFVIDKVN---KRIPVIAGTGS---NNT 82 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSH
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCc---ccH
Confidence 5 56678899999999999999988 566666677899999988988887754 24555555533 356
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC----CCHHHHHHHH----HhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 240 EESLRRSRAFADAGADVLFIDAL----ASKEEMKAFC----EISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~----~s~eei~~i~----~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
+|+|+.++..+++|||++++-.+ ++.+++.+.- ++.+ +|+++ |+ |+.| -.++++.+.++
T Consensus 83 ~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 151 (291)
T 3a5f_A 83 AASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVS-TPIIIYNV---PGRTGLNITPGTLKEL 151 (291)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCC-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 89999999999999999877542 5666766544 3444 67643 43 2222 24777776665
No 32
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=97.61 E-value=0.001 Score=65.82 Aligned_cols=122 Identities=23% Similarity=0.327 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~---~~t~~a 96 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVV--------GGTTGESPTLTSEEKVALYRHVVSVVD---KRVPVIAGTGS---NNTHAS 96 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCceEEeCCCC---CCHHHH
Confidence 5567889999999999999988 566666677899999999998887764 34556655533 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.+|
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 162 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP-LPVMLYNV---PGRSIVQISVDTVVRL 162 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999877442 4656555 4455555 67643 43 2222 24677666554
No 33
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=97.59 E-value=0.00046 Score=68.19 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCC-CeEEEEecchhhcccHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS-DIVIVARTDSRQALSLEE 241 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~-dfvIiARTDA~~~~~lde 241 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. . ..-|++=+-+ ...++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---g~rvpviaGvg~---~~t~~ 91 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVP--------VGTTGESATLTHEEHRTCIEIAVETCK---GTKVKVLAGAGS---NATHE 91 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEC--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEEECCC---SSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCCeEEEeCCC---CCHHH
Confidence 5577889999999999999987 566666678889999888888888764 3 5666665533 45789
Q ss_pred HHHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee
Q 012815 242 SLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM 281 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~ 281 (456)
+|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPii 138 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD-IPVL 138 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEE
Confidence 999999999999999887543 4555544 4455565 6764
No 34
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.58 E-value=0.00068 Score=64.47 Aligned_cols=180 Identities=16% Similarity=0.129 Sum_probs=100.3
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-|+.++++|++++.++.... ...+.. ..+..++.|++.+++||++. .|+.+..++ +.+.++||+
T Consensus 35 ~a~~~~~~Ga~~i~v~d~~~--~~~~~g--------~~~~~i~~i~~~~~iPvi~~--ggi~~~~~i----~~~~~~Gad 98 (266)
T 2w6r_A 35 WVVEVEKRGAGEILLTSIDR--DGTKSG--------YDTEMIRFVRPLTTLPIIAS--GGAGKMEHF----LEAFLAGAD 98 (266)
T ss_dssp HHHHHHHHTCSEEEEEETTT--SSCSSC--------CCHHHHHHHGGGCCSCEEEE--SCCCSTHHH----HHHHHHTCS
T ss_pred HHHHHHHCCCCEEEEEecCc--ccCCCc--------ccHHHHHHHHHhcCCCEEEE--CCCCCHHHH----HHHHHcCCc
Confidence 36778889999999974321 111111 13456677888889999995 344454444 455568999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC--CCeEEEEec----ch---hhcccHH-----HHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG--SDIVIVART----DS---RQALSLE-----ESLRRS 246 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G--~dfvIiART----DA---~~~~~ld-----eAI~Ra 246 (456)
||+|-.... . + -++++.+ +.+.+ ..| .+.++++=. +. ....+.+ ...+++
T Consensus 99 ~v~lg~~~~-------~-~-~~~~~~~----~~~~~---~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~ 162 (266)
T 2w6r_A 99 KALAASVFH-------F-R-EIDMREL----KEYLK---KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWV 162 (266)
T ss_dssp EEECCCCC---------------CHHH----HHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH
T ss_pred HhhhhHHHH-------h-C-CCCHHHH----HHHHH---HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHH
Confidence 999955421 0 0 0022222 22211 112 122222211 10 0001111 235677
Q ss_pred HHhHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012815 247 RAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 247 kAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa 317 (456)
+.+.++|++.|++... .+.+.++++.+.++ +|+.++ +|-...-...++.+.|+.-|+.+..++...
T Consensus 163 ~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~-ipvia~----GGI~~~ed~~~~~~~Gadgv~vgsal~~~~ 236 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHFRE 236 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTC---
T ss_pred HHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHcCCHHHHccHHHHcCC
Confidence 7888999999998542 34678888888765 777654 343211234667778999999999877654
No 35
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.57 E-value=0.012 Score=54.33 Aligned_cols=155 Identities=16% Similarity=0.180 Sum_probs=95.4
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCH---HHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISY---GEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~---~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
.++.+.++|++.|.+. .+|.....+ .+++..++.+++..++||+++- .++.+.++
T Consensus 36 ~~~~~~~~G~~~i~l~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~------------~~~~a~~~ 93 (227)
T 2tps_A 36 VVQKALKGGATLYQFR----------EKGGDALTGEARIKFAEKAQAACREAGVPFIVND------------DVELALNL 93 (227)
T ss_dssp HHHHHHHHTCSEEEEC----------CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEES------------CHHHHHHH
T ss_pred HHHHHHHCCCCEEEEe----------cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcC------------HHHHHHHc
Confidence 4666778899988655 223233455 6777778888887789999961 13456789
Q ss_pred CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
|+++||+.+.. . + +.++ ++..|. ++++-+ ....+| ++.+.++|||.|
T Consensus 94 gad~v~l~~~~-------~------~----~~~~------~~~~g~--~~~~~s----~~t~~e----~~~a~~~g~d~v 140 (227)
T 2tps_A 94 KADGIHIGQED-------A------N----AKEV------RAAIGD--MILGVS----AHTMSE----VKQAEEDGADYV 140 (227)
T ss_dssp TCSEEEECTTS-------S------C----HHHH------HHHHTT--SEEEEE----ECSHHH----HHHHHHHTCSEE
T ss_pred CCCEEEECCCc-------c------C----HHHH------HHhcCC--cEEEEe----cCCHHH----HHHHHhCCCCEE
Confidence 99999995532 0 1 1121 111243 333321 122334 344557899999
Q ss_pred Ee----cc--------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 258 FI----DA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 258 fi----e~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
++ ++ ....+.++++.+.++.+|+.+ .+|-+ .-+..++.+.|+..|..+..++.
T Consensus 141 ~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia----~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 141 GLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVG----IGGIT-IDNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp EECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEE----ESSCC-TTTSHHHHHTTCSEEEESHHHHT
T ss_pred EECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEE----EcCCC-HHHHHHHHHcCCCEEEEhHHhhc
Confidence 85 32 124567788877654355442 24544 34678888999999999988774
No 36
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.57 E-value=0.0075 Score=58.31 Aligned_cols=211 Identities=18% Similarity=0.190 Sum_probs=122.7
Q ss_pred HHHHHHHhCCCc----eeecccCChH----HHHHHHHhCCcEEEecc-hH--------Hh-hhhcccCCCCCCCHHHHHH
Q 012815 79 KSLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTSG-FS--------IS-AARLALPDTGFISYGEMVD 140 (456)
Q Consensus 79 ~~Lr~ll~~~~~----lv~pgayDal----SArl~e~aGfdAI~vSG-~a--------vS-as~lG~PD~~~lt~~Eml~ 140 (456)
+.|.++.+++++ ++++|-.|.- -++.++++|+|+|-++- +. +- ++...+ . ..++++.+++
T Consensus 6 ~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al-~-~G~~~~~~~~ 83 (262)
T 2ekc_A 6 DKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVAL-K-NGIRFEDVLE 83 (262)
T ss_dssp HHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHH-H-TTCCHHHHHH
T ss_pred HHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHH-H-cCCCHHHHHH
Confidence 456665544443 3446666643 25667788999999862 21 00 000001 1 1268889999
Q ss_pred HHHHHHhcc-CCcEEEeCCCCCCCHHH---HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHH
Q 012815 141 QGQLITQAV-SIPVIGDGDNGYGNAMN---VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD 216 (456)
Q Consensus 141 ~~r~I~ra~-~iPVIaD~DtGYG~~~n---v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~ 216 (456)
.++.|.+.+ ++|+++ .||-|+.. +.+-++...++|++|+.+=|- |.++...-++++++
T Consensus 84 ~v~~ir~~~~~~Pi~~---m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl---------------~~ee~~~~~~~~~~ 145 (262)
T 2ekc_A 84 LSETLRKEFPDIPFLL---MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDL---------------PPEEAEELKAVMKK 145 (262)
T ss_dssp HHHHHHHHCTTSCEEE---ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTC---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCEEE---EecCcHHHHhhHHHHHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHH
Confidence 999999988 899999 36666532 356778888999999999653 23554444443332
Q ss_pred HhHhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC-------------CHHHHHHHHHhCCCCceee
Q 012815 217 ARKESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA-------------SKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 217 Ar~~~G~d-fvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~-------------s~eei~~i~~~v~~vP~~~ 282 (456)
.|-+ ..+++-+.. .+|.+.+.+.+...++..++. ..+.++++.+..+ +|+.+
T Consensus 146 ----~gl~~i~l~~p~t~---------~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~-~pv~v 211 (262)
T 2ekc_A 146 ----YVLSFVPLGAPTST---------RKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCD-KPVVV 211 (262)
T ss_dssp ----TTCEECCEECTTCC---------HHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCC-SCEEE
T ss_pred ----cCCcEEEEeCCCCC---------HHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcC-CCEEE
Confidence 2333 333443321 246666666666666654322 1245666666554 67654
Q ss_pred eeeccCCCCCCCCHHHHHh--cCCCEEeccchHHHHH----HHHHHHHHHHHHc
Q 012815 283 NMLEGGGKTPILNPLELEE--LGFKLVAYPLSLIGVS----VRAMQDALTAIKG 330 (456)
Q Consensus 283 N~~~~~g~tp~lt~~eL~e--lGv~~Vs~p~~ll~aa----~~A~~~~l~~i~~ 330 (456)
+.|- -+.+++++ .|..-|+.|+.+.+.. ...+++..+++++
T Consensus 212 ----G~GI---~t~e~~~~~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 212 ----GFGV---SKKEHAREIGSFADGVVVGSALVKLAGQKKIEDLGNLVKELKE 258 (262)
T ss_dssp ----ESSC---CSHHHHHHHHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ----eCCC---CCHHHHHHHHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 2232 13555444 5899999999888773 3345555555543
No 37
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.56 E-value=0.0044 Score=60.56 Aligned_cols=205 Identities=11% Similarity=0.012 Sum_probs=122.0
Q ss_pred eeecccC--ChHHHHHHHHhCCcEEEecchHHhhhhcccCCC---------------CCCCHHHHHHHHHHHHhcc--CC
Q 012815 91 HQGPACF--DALSAKLVEKSGFSFCFTSGFSISAARLALPDT---------------GFISYGEMVDQGQLITQAV--SI 151 (456)
Q Consensus 91 lv~pgay--DalSArl~e~aGfdAI~vSG~avSas~lG~PD~---------------~~lt~~Eml~~~r~I~ra~--~i 151 (456)
+..+|.+ |+-..+.+.+.||-++.+.+...-. ..|.|-. ..-..+.+++..+...+.. +.
T Consensus 16 ~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~-~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~ 94 (311)
T 1jub_A 16 MNASGVHCMTIEDLEELKASQAGAYITKSSTLEK-REGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEG 94 (311)
T ss_dssp EECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSC-BCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSS
T ss_pred EECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcc-cCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCC
Confidence 4555664 5666677788888877665433221 1233321 1123566666666544344 78
Q ss_pred cEEEeCCCCCC-CHHHHHHHHHHHHHhCcc-EEEeCCCCCCCCccCCC-Ccccc-CHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 152 PVIGDGDNGYG-NAMNVKRTVKGYIKAGFA-GIILEDQVSPKGCGHTR-GRKVV-SREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 152 PVIaD~DtGYG-~~~nv~rtVk~l~~AGaa-GI~IEDq~~pK~CGH~~-gk~lv-p~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
|+++-+= | +.....+.++++.++|++ +|.|-=. |-+.. +..+- +.+...+-|++++++. +.++++
T Consensus 95 p~~~~i~---g~~~~~~~~~a~~~~~~g~d~~iein~~-----~P~~~g~~~~g~~~e~~~~iv~~vr~~~---~~Pv~v 163 (311)
T 1jub_A 95 PIFFSIA---GMSAAENIAMLKKIQESDFSGITELNLS-----CPNVPGEPQLAYDFEATEKLLKEVFTFF---TKPLGV 163 (311)
T ss_dssp CCEEEEC---CSSHHHHHHHHHHHHHSCCCSEEEEESC-----CCCSSSCCCGGGCHHHHHHHHHHHTTTC---CSCEEE
T ss_pred CEEEEcC---CCCHHHHHHHHHHHHhcCCCeEEEEecc-----CCCCCCcccccCCHHHHHHHHHHHHHhc---CCCEEE
Confidence 9887752 4 467888999999999999 8877432 33321 22232 5555555555554432 234444
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC--------------------------------CHHHHHHHHHhC
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDALA--------------------------------SKEEMKAFCEIS 275 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~--------------------------------s~eei~~i~~~v 275 (456)
.-+.+- +.++..+-++.+.++|+|.|.+.... +.+.++++.+.+
T Consensus 164 Ki~~~~----~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~ 239 (311)
T 1jub_A 164 KLPPYF----DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRL 239 (311)
T ss_dssp EECCCC----SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTS
T ss_pred EECCCC----CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhc
Confidence 444431 44566677899999999999875421 145677777777
Q ss_pred C-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 276 P-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 276 ~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+ .+|+..+ +|-...-+..++-++|...|..+..++.
T Consensus 240 ~~~ipvi~~----GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 240 KPEIQIIGT----GGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp CTTSEEEEE----SSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 3 3777654 3422112234444689999999888776
No 38
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=97.56 E-value=0.00057 Score=67.20 Aligned_cols=122 Identities=19% Similarity=0.263 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 85 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVS--------VGTTGESATLNHDEHADVVMMTLDLAD---GRIPVIAGTGA---NATAEA 85 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---ccHHHH
Confidence 5567889999999999999988 566666677899999998988888764 24555555533 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHHH----HHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMKA----FCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~----i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++.+ +++..+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD-LPQILYNV---PSRTGCDLLPETVGRL 151 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEEECC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---cchhccCCCHHHHHHH
Confidence 99999999999999877442 46566554 444454 67643 43 2222 24676665554
No 39
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=97.56 E-value=0.00075 Score=66.63 Aligned_cols=122 Identities=20% Similarity=0.263 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 84 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVP--------VGTTGESPTLTEEEHKRVVALVAEQAQ---GRVPVIAGAGS---NNPVEA 84 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEccCC---CCHHHH
Confidence 5567889999999999999987 566666677899999988888887764 24555555533 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.| -.++++.+.++
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 150 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID-IPIIVYNI---PPRAVVDIKPETMARL 150 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999987543 4556555 4555665 67643 43 2221 14676665554
No 40
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.0008 Score=66.14 Aligned_cols=122 Identities=21% Similarity=0.329 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 84 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVP--------CGTTGESPTLSKSEHEQVVEITIKTAN---GRVPVIAGAGS---NSTAEA 84 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEET--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---ccHHHH
Confidence 5567889999999999999987 666666677899999998988887754 24445555433 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 150 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST-IPIIVYNI---PGRSAIEIHVETLARI 150 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999887543 4555555 4556665 67653 43 2212 14666554443
No 41
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=97.54 E-value=0.0014 Score=65.76 Aligned_cols=122 Identities=20% Similarity=0.198 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~---~st~ea 118 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGI--------LGSTGIYMYLTREERRRAIEAAATILR---GRRTLMAGIGA---LRTDEA 118 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999988 566666677899999999998888764 35666665533 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.+|
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiilYn~---P~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA-LPLAIYNN---PTTTRFTFSDELLVRL 184 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEEECC---HHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999987543 4555554 4555665 67643 43 2222 14676665554
No 42
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=97.53 E-value=0.00062 Score=67.17 Aligned_cols=122 Identities=24% Similarity=0.284 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 91 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVA--------VGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTGA---NNTVEA 91 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---cCHHHH
Confidence 5577889999999999999988 566666677889999888888888764 35556665433 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|+ |+.| -.++++.+.++
T Consensus 92 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 157 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS-IPMIIYNV---PGRTVVSMTNDTILRL 157 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEEC---CchhccCCCHHHHHHH
Confidence 99999999999999887542 4555544 4445565 6764 343 2211 24676666554
No 43
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=97.53 E-value=0.00051 Score=68.14 Aligned_cols=122 Identities=16% Similarity=0.248 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~---~st~~a 96 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIV--------LGTTGESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAGT---NSTEKT 96 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCCC---ccHHHH
Confidence 5677889999999999999988 566666677899999988888887764 34555555533 357899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 162 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD-LGIVVYNV---PGRTGVNVLPETAARI 162 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999887542 4666655 4444554 67643 43 2222 14676655554
No 44
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=97.53 E-value=0.0014 Score=64.76 Aligned_cols=123 Identities=21% Similarity=0.207 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~---~~t~~a 95 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYV--------GGSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHVGC---VSTAES 95 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CeeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5567889999999999999988 556666677899999888888887754 35666665533 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+.+|+++ |+ |+.+ -.++++.+.+|
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~---P~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNI---PALSGVKLTLDQINTL 162 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEEC---HHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999877442 4656655 4445554356643 43 2222 14676665554
No 45
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=97.53 E-value=0.0012 Score=65.03 Aligned_cols=122 Identities=20% Similarity=0.226 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
|.....+.++.+++ .|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~ 87 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYV--------GGSTGENFMLSTEEKKEIFRIAKDEAK---DQIALIAQVGS---VNLKE 87 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SCHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEe--------CccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEecCC---CCHHH
Confidence 55678899999999 99999988 566666677899999888888887764 35666666633 35789
Q ss_pred HHHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 242 SLRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
+|+.++..+++|||++++-.+ ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 154 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG-SNMIVYSI---PFLTGVNMGIEQFGEL 154 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-CCEEEEEC---HHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEEC---ccccCcCCCHHHHHHH
Confidence 999999999999999877543 4555555 4455555 67643 43 2222 14677665554
No 46
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=97.52 E-value=0.00085 Score=66.99 Aligned_cols=120 Identities=21% Similarity=0.233 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+- ....+|+
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~a 95 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVI--------LGTNAEAFLLTREERAQLIATARKAVG---PDFPIMAGVG---AHSTRQV 95 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHC---TTSCEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CCCHHHH
Confidence 5677899999999999999988 566666677889999888888888763 3555666553 3467899
Q ss_pred HHHHHHhHhcCCCEEEeccC------CCHHHHH----HHHHhCCCCceeeeeeccCCCC--CCCCHHHH
Q 012815 243 LRRSRAFADAGADVLFIDAL------ASKEEMK----AFCEISPLVPKMANMLEGGGKT--PILNPLEL 299 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~------~s~eei~----~i~~~v~~vP~~~N~~~~~g~t--p~lt~~eL 299 (456)
|+.++..+++|||++++-.+ .+.+++. ++++..+ +|+++ ...|+.+ -.++++.+
T Consensus 96 i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~-lPiil--Yn~P~~t~g~~l~~~~~ 161 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSP-LPVVI--YNFPGVCNGIDLDSDMI 161 (318)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCS-SCEEE--EECCC----CCCCHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCC-CCEEE--EeCCcccCCCCCCHHHH
Confidence 99999999999999887543 2455543 4555665 67642 2234432 24565443
No 47
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=97.52 E-value=0.0011 Score=66.83 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~---~st~ea 115 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFF--------LGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTGG---TNARET 115 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCS---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHHH
Confidence 5677889999999999999988 566666677899999999998888764 34556655533 357899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|+++ |+ |+.| -.++++.+.+|
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiilYn~---P~~tg~~l~~e~~~~L 181 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVT-LPVMLYNF---PALTGQDLTPALVKTL 181 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCS-SCEEEEEC---HHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---chhcCcCCCHHHHHHH
Confidence 99999999999999877442 4656655 4455555 67643 43 2222 14676655544
No 48
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=97.50 E-value=0.00098 Score=66.37 Aligned_cols=118 Identities=22% Similarity=0.269 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- . ..+|+
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~v~~~~v~~~~---grvpViaGvg---~-~t~~a 95 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVP--------CGNTSEFYALSLEEAKEEVRRTVEYVH---GRALVVAGIG---Y-ATSTA 95 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECT--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC---S-SHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEEeC---c-CHHHH
Confidence 5678899999999999999977 666666678899999888888888764 3566666663 2 57999
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCCCCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~tp~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|. + ..++++.+.+|
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~--g----~~l~~~~~~~L 157 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD-FPSLVYFK--D----PEISDRVLVDL 157 (316)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT-SCEEEEEC--C----TTSCTHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeC--C----CCCCHHHHHHH
Confidence 99999999999999987532 3555554 4455565 6764 453 1 24555554443
No 49
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=97.49 E-value=0.0004 Score=68.39 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ..+-|++=+- ..+.+++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~a 86 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIV--------NGTTAESPTLTTDEKELILKTVIDLVD---KRVPVIAGTG---TNDTEKS 86 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccccccCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---cccHHHH
Confidence 5567889999999999999988 566666677889999888888888764 3555666543 2457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM 281 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~ 281 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPii 132 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVK-LPVV 132 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-SCEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEE
Confidence 99999999999999887542 4555544 4445554 6764
No 50
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.48 E-value=0.0067 Score=59.35 Aligned_cols=204 Identities=10% Similarity=0.030 Sum_probs=122.6
Q ss_pred eeecccC--ChHHHHHHHHhCCcEEEecchHHhhh-----------------hcccCCCCCCCHHHHHHHHHHHHhccCC
Q 012815 91 HQGPACF--DALSAKLVEKSGFSFCFTSGFSISAA-----------------RLALPDTGFISYGEMVDQGQLITQAVSI 151 (456)
Q Consensus 91 lv~pgay--DalSArl~e~aGfdAI~vSG~avSas-----------------~lG~PD~~~lt~~Eml~~~r~I~ra~~i 151 (456)
+..+|.+ |.-..+.+++.|+-++.+.+...-.. ..|+++. ..+.+++..+......+.
T Consensus 18 ~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~---g~~~~~~~~~~~~~~~~~ 94 (314)
T 2e6f_A 18 MNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNL---GFDFYLKYASDLHDYSKK 94 (314)
T ss_dssp EECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBS---CHHHHHHHHHHTCCTTTC
T ss_pred EECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCc---CHHHHHHHHHHHhhcCCC
Confidence 3445553 34555667888998877654332110 1233332 245555554433222468
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCcc---EEEeCCCCCCCCccCCC-Cccc-cCHHHHHHHHHHHHHHhHhhCCCeE
Q 012815 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFA---GIILEDQVSPKGCGHTR-GRKV-VSREEAVMRIKAAVDARKESGSDIV 226 (456)
Q Consensus 152 PVIaD~DtGYG~~~nv~rtVk~l~~AGaa---GI~IEDq~~pK~CGH~~-gk~l-vp~ee~v~kI~AA~~Ar~~~G~dfv 226 (456)
|+++-.= | .+.+...+.++++.++|++ +|.|-=. |-+.. +..+ .+.+...+-|++++++. +.+++
T Consensus 95 p~~~~i~-g-~~~~~~~~~a~~~~~~g~d~~~~iein~~-----~P~~~g~~~~g~~~~~~~~ii~~vr~~~---~~Pv~ 164 (314)
T 2e6f_A 95 PLFLSIS-G-LSVEENVAMVRRLAPVAQEKGVLLELNLS-----CPNVPGKPQVAYDFEAMRTYLQQVSLAY---GLPFG 164 (314)
T ss_dssp CEEEEEC-C-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-----CCCSTTCCCGGGSHHHHHHHHHHHHHHH---CSCEE
T ss_pred cEEEEeC-C-CCHHHHHHHHHHHHHhCCCcCceEEEEcC-----CCCCCCchhhcCCHHHHHHHHHHHHHhc---CCCEE
Confidence 9888762 2 1467888999999999999 8888432 32322 1222 25565566666666553 24566
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcC-CCEEEeccCC--------------------------------CHHHHHHHHH
Q 012815 227 IVARTDSRQALSLEESLRRSRAFADAG-ADVLFIDALA--------------------------------SKEEMKAFCE 273 (456)
Q Consensus 227 IiARTDA~~~~~ldeAI~RakAy~eAG-AD~Ifie~~~--------------------------------s~eei~~i~~ 273 (456)
+--+.+- ..++..+-++.+.++| +|.|.++... +.+.++++.+
T Consensus 165 vK~~~~~----~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~ 240 (314)
T 2e6f_A 165 VKMPPYF----DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR 240 (314)
T ss_dssp EEECCCC----CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH
T ss_pred EEECCCC----CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH
Confidence 6666552 3456666688999999 9999765421 1467778878
Q ss_pred hCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 274 ISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 274 ~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
.++.+|+..+ +|-...-+..++-++|...|..+..++.
T Consensus 241 ~~~~ipvi~~----GGI~~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 241 RCPDKLVFGC----GGVYSGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp HCTTSEEEEE----SSCCSHHHHHHHHHHTCSSEEECHHHHH
T ss_pred hcCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEchhhHh
Confidence 7744787654 3422112344544689999999888775
No 51
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.48 E-value=0.00021 Score=67.80 Aligned_cols=175 Identities=17% Similarity=0.168 Sum_probs=49.9
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-|+.++++|++.++++...-+ ..+. .. .++.++.|++.+++||++.. |..++.. ++++.++||+
T Consensus 40 ~a~~~~~~G~~~i~v~d~~~~--~~~~----~~----~~~~i~~i~~~~~ipvi~~G--gi~~~~~----~~~~l~~Gad 103 (247)
T 3tdn_A 40 WVVEVEKRGAGEILLTSIDRD--GTKS----GY----DTEMIRFVRPLTTLPIIASG--GAGKMEH----FLEAFLRGAD 103 (247)
T ss_dssp HHHHHHHTTCSEEEEEETTTT--TCSS----CC----CHHHHHHHGGGCCSCEEEES--CCCSHHH----HHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEEecCcc--cCCC----cc----cHHHHHHHHHhCCCCEEEeC--CCCCHHH----HHHHHHcCCC
Confidence 467788899999998754211 1111 11 24567888999999999963 3445544 4456678999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE---ec---------chhhcccHHHHHHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA---RT---------DSRQALSLEESLRRSRA 248 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA---RT---------DA~~~~~ldeAI~RakA 248 (456)
+|+|-... +.+++ ++.++.. ..|++.++++ +. ..-....-.+.++.++.
T Consensus 104 ~V~ig~~~------------l~dp~-~~~~~~~------~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~ 164 (247)
T 3tdn_A 104 KVSINTAA------------VENPS-LITQIAQ------TFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVE 164 (247)
T ss_dssp EECCSHHH------------HHCTH-HHHHHHH------HHC--------------------------------------
T ss_pred eeehhhHH------------hhChH-HHHHHHH------HhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHH
Confidence 99884321 11111 2222221 1222222211 11 00000011245677889
Q ss_pred hHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 249 FADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 249 y~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.++|++.|++... .+.+.++++.+.++ +|+.++ +|-...-...++.++|+.-|..+..++.
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~-iPvia~----GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 165 VEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred HHhcCCCEEEEecccCCCCcCCCCHHHHHHHHHhCC-CCEEEE----CCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 99999999998764 22355666766654 666543 3432123457778889888887765544
No 52
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.47 E-value=0.00063 Score=67.27 Aligned_cols=123 Identities=16% Similarity=0.229 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ..+-|++=+- ..+.+|+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~a 88 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTP--------LGSTGEFAYLGTAQREAVVRATIEAAQ---RRVPVVAGVA---STSVADA 88 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBT--------TSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCBEEEEE---ESSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CCCHHHH
Confidence 5577899999999999999976 566666677889999988888888764 3444555442 2457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCceeeeeeccCCCCC-CCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKMANMLEGGGKTP-ILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|+++ ...|+.|. .++++.+.+|
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiil--Yn~P~~tg~~l~~~~~~~L 154 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVE-IPVVI--YTNPQFQRSDLTLDVIARL 154 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCS-SCEEE--EECTTTCSSCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCC-CCEEE--EECccccCCCCCHHHHHHH
Confidence 99999999999999887532 4555554 4445565 67642 22344332 4666555544
No 53
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=97.47 E-value=0.0014 Score=64.61 Aligned_cols=123 Identities=17% Similarity=0.127 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 87 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTL--------FGTTGEGCSVGSRERQAILSSFIAAGI---APSRIVTGVLV---DSIEDA 87 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHTTC---CGGGEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---ccHHHH
Confidence 5567889999999999999988 566666677899999888888887753 24445554433 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC-----CCHHHHH----HHHHhCC--CCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISP--LVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~--~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.| .+|+++ |+ |+.+ -.++++.+.++
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~---P~~tg~~l~~~~~~~L 157 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNI---PSVTMVTLSVELVGRL 157 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---cchhCcCCCHHHHHHH
Confidence 99999999999999987432 4656555 4556663 477653 43 2222 14666655444
No 54
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=97.44 E-value=0.0019 Score=63.42 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. + |++=+-+ .+.+++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~v~~~~~~~~~----g--ViaGvg~---~~t~~a 80 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFV--------NGTTGLGPALSKDEKRQNLNALYDVTH----K--LIFQVGS---LNLNDV 80 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------TSTTTTGGGSCHHHHHHHHHHHTTTCS----C--EEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC----C--eEEeeCC---CCHHHH
Confidence 5567889999999999999988 566666677888888888887776643 3 4454432 457899
Q ss_pred HHHHHHhHhcCCCEEEecc----C-CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDA----L-ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~----~-~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-. . ++.+++. +++++.+ +|+++ |+ |+.+ -.++++.+.++
T Consensus 81 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISS-HSLYIYNY---PAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCC-SCEEEEEC---HHHHSCCCCHHHHTTT
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEEEEC---chHhCcCCCHHHHhcc
Confidence 9999999999999988743 2 4656555 4556665 67653 43 2222 25889999998
No 55
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=97.43 E-value=0.00089 Score=65.79 Aligned_cols=122 Identities=25% Similarity=0.294 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 85 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVA--------VGTTGEASTLSMEEHTQVIKEIIRVAN---KRIPIIAGTGA---NSTREA 85 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccccccCCHHHHHHHHHHHHHHhC---CCCeEEEeCCC---CCHHHH
Confidence 5577889999999999999988 555565667888999888888888764 34556665533 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|++ .|+ |+.+ -.++++.+.++
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 151 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE-LPLILYNV---PGRTGVDLSNDTAVRL 151 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEec---ccccCCCCCHHHHHHH
Confidence 99999999999999887542 4555544 4445565 6764 333 2211 24677666654
No 56
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=97.43 E-value=0.00071 Score=67.45 Aligned_cols=122 Identities=25% Similarity=0.319 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+|+
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~---~st~ea 107 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVA--------VGTTGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTGA---NSTREA 107 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE--------SSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---cCHHHH
Confidence 5577889999999999999988 555565667889999888888888764 34556664433 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|+ |+.+ -.++++.+.++
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 173 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA-IPQILYNV---PGRTSCDMLPETVERL 173 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---ccccCCCCCHHHHHHH
Confidence 99999999999999887543 4555544 4455665 6764 343 2111 24666555443
No 57
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.41 E-value=0.012 Score=56.24 Aligned_cols=202 Identities=13% Similarity=0.143 Sum_probs=111.6
Q ss_pred HHHHHHHHhCCCc----eeecccCChH----HHHHHHHhCCcEEEecc-hH--H-------hhhhcccCCCCCCCHHHHH
Q 012815 78 AKSLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTSG-FS--I-------SAARLALPDTGFISYGEMV 139 (456)
Q Consensus 78 a~~Lr~ll~~~~~----lv~pgayDal----SArl~e~aGfdAI~vSG-~a--v-------Sas~lG~PD~~~lt~~Eml 139 (456)
.+.|.++.+.+++ .+++|-.|.- -++.++++|+|.|-+.. +. + .++...+ . ..++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al-~-~g~~~~~~~ 83 (262)
T 1rd5_A 6 SDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARAL-A-SGTTMDAVL 83 (262)
T ss_dssp HHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHH-T-TTCCHHHHH
T ss_pred HHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHH-H-cCCCHHHHH
Confidence 4566666655543 2333333322 25666778999998852 11 0 0000001 1 226889999
Q ss_pred HHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 140 DQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 140 ~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
..++.|.+.+++||++- +|-++.. ...++.+.++|++||++-|-.. ++..+-+..+++
T Consensus 84 ~~i~~ir~~~~~Pv~~m---~~~~~~~-~~~~~~a~~aGadgv~v~d~~~---------------~~~~~~~~~~~~--- 141 (262)
T 1rd5_A 84 EMLREVTPELSCPVVLL---SYYKPIM-FRSLAKMKEAGVHGLIVPDLPY---------------VAAHSLWSEAKN--- 141 (262)
T ss_dssp HHHHHHGGGCSSCEEEE---CCSHHHH-SCCTHHHHHTTCCEEECTTCBT---------------TTHHHHHHHHHH---
T ss_pred HHHHHHHhcCCCCEEEE---ecCcHHH-HHHHHHHHHcCCCEEEEcCCCh---------------hhHHHHHHHHHH---
Confidence 99999998889999883 2444321 1122348889999999977531 122222222222
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---C---------CHHHHHHHHHhCCCCceeeeeecc
Q 012815 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---A---------SKEEMKAFCEISPLVPKMANMLEG 287 (456)
Q Consensus 220 ~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~---------s~eei~~i~~~v~~vP~~~N~~~~ 287 (456)
.|-+.++..-.+.. .+|.+++.+.+.+.+++.++ . ..+.++++.+..+ +|+.+ +
T Consensus 142 -~g~~~i~~~a~~t~--------~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~-~pI~v----g 207 (262)
T 1rd5_A 142 -NNLELVLLTTPAIP--------EDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN-KPVAV----G 207 (262)
T ss_dssp -TTCEECEEECTTSC--------HHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS-SCEEE----E
T ss_pred -cCCceEEEECCCCC--------HHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC-CeEEE----E
Confidence 23332222222111 25666666677766665432 1 1235666666654 67653 3
Q ss_pred CCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012815 288 GGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 288 ~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa 317 (456)
+|-...-+..++.++|...|+.++.++++.
T Consensus 208 GGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 208 FGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 343211245667788999999999877654
No 58
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=97.40 E-value=0.0023 Score=62.65 Aligned_cols=118 Identities=17% Similarity=0.233 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. + |++=+-+ .+.+++
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~----g--vi~Gvg~---~~t~~a 79 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFV--------AGTTGLGPALSLQEKMELTDAATSAAR----R--VIVQVAS---LNADEA 79 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------TSTTTTGGGSCHHHHHHHHHHHHHHCS----S--EEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC----C--EEEeeCC---CCHHHH
Confidence 5567889999999999999988 566666677899999888888887753 3 4454432 356899
Q ss_pred HHHHHHhHhcCCCEEEeccC-----CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHh
Q 012815 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEE 301 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~e 301 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|+++ |+ |+.+ -.++++.+.+
T Consensus 80 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVS-IPVFLYNY---PAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---hhhcCCCCCHHHHHh
Confidence 99999999999999987432 4656555 4555665 67643 43 2222 1477887776
No 59
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=97.40 E-value=0.0016 Score=64.77 Aligned_cols=122 Identities=15% Similarity=0.198 Sum_probs=86.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+-+ .+.+|+
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~a 92 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCI--------LANFSEQFAITDDERDVLTRTILEHVA---GRVPVIVTTSH---YSTQVC 92 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---chHHHH
Confidence 5677899999999999999988 566666678899999999998888764 35566666533 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC-------CCHHHHH----HHHHhCCCCcee-eeeeccCCCCCCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL-------ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-------~s~eei~----~i~~~v~~vP~~-~N~~~~~g~tp~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|+ |...-.++++.+.+|
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~tg~~l~~~~~~~L 160 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIA-IPIMVQDA---PASGTALSAPFLARM 160 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCS-SCEEEEEC---GGGCCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcC-CCEEEEeC---CCCCCCCCHHHHHHH
Confidence 99999999999999887432 3555554 4455565 6764 343 221224666554443
No 60
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.40 E-value=0.0016 Score=61.14 Aligned_cols=175 Identities=16% Similarity=0.160 Sum_probs=101.8
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
.|+.++++|++.+.+....-+ .. +..+. ..++.|++.+++||++.. |.-++. .++.+.++||+
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~--~~-----~~~~~----~~i~~i~~~~~ipv~v~g--gI~~~~----~~~~~l~~Gad 99 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAA--FG-----TGDNR----ALIAEVAQAMDIKVELSG--GIRDDD----TLAAALATGCT 99 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHH--HT-----SCCCH----HHHHHHHHHCSSEEEEES--SCCSHH----HHHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEecCchh--hc-----CCChH----HHHHHHHHhcCCcEEEEC--CcCCHH----HHHHHHHcCCC
Confidence 357788899999999854322 11 22344 455677778899998852 233443 36777889999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCe--EEEEecchhhcccHH----HHHHHHHHhHhcCC
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI--VIVARTDSRQALSLE----ESLRRSRAFADAGA 254 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~df--vIiARTDA~~~~~ld----eAI~RakAy~eAGA 254 (456)
+|++--.. +-.++...+.++ . .|... -+..+.......+.+ ..++-++.+.++|+
T Consensus 100 ~V~lg~~~------------l~~p~~~~~~~~----~---~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~ 160 (244)
T 1vzw_A 100 RVNLGTAA------------LETPEWVAKVIA----E---HGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGC 160 (244)
T ss_dssp EEEECHHH------------HHCHHHHHHHHH----H---HGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTC
T ss_pred EEEECchH------------hhCHHHHHHHHH----H---cCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCC
Confidence 99982111 112222222222 1 12111 122220000001100 33566777888999
Q ss_pred CEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc---CCCEEeccchHHHH
Q 012815 255 DVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL---GFKLVAYPLSLIGV 316 (456)
Q Consensus 255 D~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el---Gv~~Vs~p~~ll~a 316 (456)
|.|++.+. .+.+.++++.+.++ +|+.++ +|-...-+..++.++ |+.-|..+..++..
T Consensus 161 ~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~-ipvia~----GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~ 228 (244)
T 1vzw_A 161 ARYVVTDIAKDGTLQGPNLELLKNVCAATD-RPVVAS----GGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK 228 (244)
T ss_dssp CCEEEEEC-------CCCHHHHHHHHHTCS-SCEEEE----SCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred CEEEEeccCcccccCCCCHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHhhccCCCceeeeeHHHHcC
Confidence 99998653 35678888888775 777654 343221345778888 99999999877654
No 61
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.38 E-value=0.014 Score=54.58 Aligned_cols=165 Identities=15% Similarity=0.174 Sum_probs=97.9
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE----eCCCCCCCHHHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG----DGDNGYGNAMNVKRTVKGYIK 176 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa----D~DtGYG~~~nv~rtVk~l~~ 176 (456)
-|+.++++|++++.+.+ ...++.|++.+++|++. |.+.+.--...-.+.++.+.+
T Consensus 41 ~a~~~~~~G~~~i~~~~---------------------~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~ 99 (234)
T 1yxy_A 41 MAKAAQEAGAVGIRANS---------------------VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAA 99 (234)
T ss_dssp HHHHHHHHTCSEEEEES---------------------HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHT
T ss_pred HHHHHHHCCCcEeecCC---------------------HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHH
Confidence 46667778998876531 13467777778999963 443321000112455678899
Q ss_pred hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 177 AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
+||+.|++.-.. +.+..+. ...+.+++++. .. ++..|...... .+ .++.+.++|||.
T Consensus 100 ~Gad~V~l~~~~----~~~~~~~---~~~~~i~~i~~---~~----~~~~v~~~~~t-----~~----ea~~a~~~Gad~ 156 (234)
T 1yxy_A 100 LNIAVIAMDCTK----RDRHDGL---DIASFIRQVKE---KY----PNQLLMADIST-----FD----EGLVAHQAGIDF 156 (234)
T ss_dssp TTCSEEEEECCS----SCCTTCC---CHHHHHHHHHH---HC----TTCEEEEECSS-----HH----HHHHHHHTTCSE
T ss_pred cCCCEEEEcccc----cCCCCCc---cHHHHHHHHHH---hC----CCCeEEEeCCC-----HH----HHHHHHHcCCCE
Confidence 999999885432 1111111 22344444432 21 35556655432 22 377788999999
Q ss_pred E--EeccC---------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 257 L--FIDAL---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 257 I--fie~~---------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
| .+.+. ++.+.++++.+. . +|+.+. ||-...-+..++.++|+..|..+..++.
T Consensus 157 i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~-ipvia~----GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 157 VGTTLSGYTPYSRQEAGPDVALIEALCKA-G-IAVIAE----GKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp EECTTTTSSTTSCCSSSCCHHHHHHHHHT-T-CCEEEE----SCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred EeeeccccCCCCcCCCCCCHHHHHHHHhC-C-CCEEEE----CCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 9 33322 235678888776 4 676543 3432112457788899999999998776
No 62
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=97.38 E-value=0.0008 Score=67.07 Aligned_cols=122 Identities=17% Similarity=0.205 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- ....+|+
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg---~~~t~~a 108 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAP--------LGSTGEGAYLSDPEWDEVVDFTLKTVA---HRVPTIVSVS---DLTTAKT 108 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecC---CCCHHHH
Confidence 5577899999999999999988 556666677889999888888888764 3455555443 3457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .|+ |+.| -.++++.+.+|
T Consensus 109 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG-VPVMLYNN---PGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CcEEEEeC---cchhCcCCCHHHHHHH
Confidence 99999999999999988543 4555554 4445565 6764 332 2211 14666655555
No 63
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=97.37 E-value=0.001 Score=66.42 Aligned_cols=104 Identities=19% Similarity=0.259 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-++.++++.. ...-|++=+-+ .+.+++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~---~st~~a 106 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSP--------VGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAGS---NSTSEA 106 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---CCHHHH
Confidence 5577899999999999999987 566666677889999888888888764 34555554433 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM 281 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~ 281 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++
T Consensus 107 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPii 152 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS-IPII 152 (315)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCC-CCEE
Confidence 99999999999999887542 4555544 4455565 6764
No 64
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=97.37 E-value=0.0021 Score=63.91 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+-+ +.+++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v--------~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~----st~~a 95 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVP--------NGNTGEFYALTIEEAKQVATRVTELVN---GRATVVAGIGY----SVDTA 95 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECT--------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECS----SHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CcccCChhhCCHHHHHHHHHHHHHHhC---CCCeEEecCCc----CHHHH
Confidence 5677889999999999999976 666666677899999988988888764 35666665533 46899
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHH----HHHHhCCCCcee-eeeeccCCCCCCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMK----AFCEISPLVPKM-ANMLEGGGKTPILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~----~i~~~v~~vP~~-~N~~~~~g~tp~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ +|++ .| . +. - ++++.+.++
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn--~--tg-~-l~~~~~~~L 157 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD-APSIIYF--K--DA-H-LSDDVIKEL 157 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS-SCEEEEE--C--CT-T-SCTHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEe--C--CC-C-cCHHHHHHH
Confidence 99999999999999987543 4555554 5556666 6764 46 1 11 2 666655554
No 65
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.36 E-value=0.0026 Score=59.55 Aligned_cols=175 Identities=9% Similarity=0.126 Sum_probs=101.3
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-|+.++++|++.+.+....-+ .. +..+. ..++.|++.+++||++. .|.-++. .++.+.++||+
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~--~~-----~~~~~----~~i~~i~~~~~ipv~v~--ggi~~~~----~~~~~l~~Gad 98 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAA--FG-----RGSNH----ELLAEVVGKLDVQVELS--GGIRDDE----SLAAALATGCA 98 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHH--TT-----SCCCH----HHHHHHHHHCSSEEEEE--SSCCSHH----HHHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEEcCccc--cc-----CCChH----HHHHHHHHhcCCcEEEE--CCCCCHH----HHHHHHHcCCC
Confidence 356788899999999854322 11 22333 45567777789999885 2233443 36777889999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE--EEEec---c-hhhcccH----HHHHHHHHHhH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV--IVART---D-SRQALSL----EESLRRSRAFA 250 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv--IiART---D-A~~~~~l----deAI~RakAy~ 250 (456)
+|++--.. +-.++.. .+ +.+. .|...+ +-.+. + .....+. ++.++-++.+.
T Consensus 99 ~V~lg~~~------------l~~p~~~-~~---~~~~---~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~ 159 (244)
T 2y88_A 99 RVNVGTAA------------LENPQWC-AR---VIGE---HGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLD 159 (244)
T ss_dssp EEEECHHH------------HHCHHHH-HH---HHHH---HGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHH
T ss_pred EEEECchH------------hhChHHH-HH---HHHH---cCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHH
Confidence 99982211 1122222 22 2221 111111 22220 0 0000011 03456677788
Q ss_pred hcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc---CCCEEeccchHHHH
Q 012815 251 DAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL---GFKLVAYPLSLIGV 316 (456)
Q Consensus 251 eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el---Gv~~Vs~p~~ll~a 316 (456)
++|++.|++.+. .+.+.++++.+.++ +|+.+| ||-...-+..++.+. |+.-|..+..++..
T Consensus 160 ~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~ 231 (244)
T 2y88_A 160 SEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTD-APVIAS----GGVSSLDDLRAIATLTHRGVEGAIVGKALYAR 231 (244)
T ss_dssp HTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCS-SCEEEE----SCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred hCCCCEEEEEecCCccccCCCCHHHHHHHHHhCC-CCEEEE----CCCCCHHHHHHHHhhccCCCCEEEEcHHHHCC
Confidence 899999998652 35678888888765 777654 343221245677888 99999998876653
No 66
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.35 E-value=0.016 Score=56.01 Aligned_cols=196 Identities=14% Similarity=0.080 Sum_probs=114.7
Q ss_pred HHHHHHHHhCCCc----eeecccCChH----HHHHHHHhCCcEEEecc-hHHhhhhcccCCC------------CCCCHH
Q 012815 78 AKSLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTSG-FSISAARLALPDT------------GFISYG 136 (456)
Q Consensus 78 a~~Lr~ll~~~~~----lv~pgayDal----SArl~e~aGfdAI~vSG-~avSas~lG~PD~------------~~lt~~ 136 (456)
.+.|.++.+++++ .+++|-.|.- -++.++++|+|+|-++- +. -.+-|. .-++++
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~s-----dp~~DG~~i~~a~~~al~~G~~~~ 79 (268)
T 1qop_A 5 ENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFS-----DPLADGPTIQNANLRAFAAGVTPA 79 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCS-----CCTTCCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-----CccCCCHHHHHHHHHHHHcCCCHH
Confidence 3456666655553 3444555433 25666788999999862 21 000011 124788
Q ss_pred HHHHHHHHHHhc-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHH
Q 012815 137 EMVDQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIK 212 (456)
Q Consensus 137 Eml~~~r~I~ra-~~iPVIaD~DtGYG~~~---nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~ 212 (456)
.+++.++.|.+. +++||++ .+|-|+. ...+-++.+.++|++|+.+=|-. .++...-++
T Consensus 80 ~~~~~v~~ir~~~~~~Pv~l---m~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~---------------~e~~~~~~~ 141 (268)
T 1qop_A 80 QCFEMLAIIREKHPTIPIGL---LMYANLVFNNGIDAFYARCEQVGVDSVLVADVP---------------VEESAPFRQ 141 (268)
T ss_dssp HHHHHHHHHHHHCSSSCEEE---EECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC---------------GGGCHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEE---EEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC---------------HHHHHHHHH
Confidence 888999999988 7999987 2444431 23577788999999999996642 122222222
Q ss_pred HHHHHhHhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC------------CHHHHHHHHHhCCCCc
Q 012815 213 AAVDARKESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA------------SKEEMKAFCEISPLVP 279 (456)
Q Consensus 213 AA~~Ar~~~G~d-fvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~------------s~eei~~i~~~v~~vP 279 (456)
++++ .|.+ .++++-+.. .+|.+.+.+.+.+.+++-++. ..+.++++.+... +|
T Consensus 142 ~~~~----~g~~~i~l~~p~t~---------~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~-~p 207 (268)
T 1qop_A 142 AALR----HNIAPIFICPPNAD---------DDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHA-AP 207 (268)
T ss_dssp HHHH----TTCEEECEECTTCC---------HHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTC-CC
T ss_pred HHHH----cCCcEEEEECCCCC---------HHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccC-Cc
Confidence 2322 2333 233333321 256666666666566653211 2467777777654 66
Q ss_pred eeeeeeccCCCCCCCCHHHH---HhcCCCEEeccchHHHHH
Q 012815 280 KMANMLEGGGKTPILNPLEL---EELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 280 ~~~N~~~~~g~tp~lt~~eL---~elGv~~Vs~p~~ll~aa 317 (456)
+.+ . +|- -+.++. .+.|...|+.|+.+.+.-
T Consensus 208 i~v---g-gGI---~t~e~~~~~~~agAD~vVVGSai~~~~ 241 (268)
T 1qop_A 208 ALQ---G-FGI---SSPEQVSAAVRAGAAGAISGSAIVKII 241 (268)
T ss_dssp EEE---E-SSC---CSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred EEE---E-CCC---CCHHHHHHHHHcCCCEEEEChHHhhhH
Confidence 543 2 232 135554 457999999999987763
No 67
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=97.31 E-value=0.00089 Score=66.39 Aligned_cols=122 Identities=15% Similarity=0.202 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ....|++=+-+ ...+|+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~a 98 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVV--------QGSNGEFPFLTSSERLEVVSRVRQAMP---KNRLLLAGSGC---ESTQAT 98 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHTSC---TTSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHcC---CCCcEEEecCC---CCHHHH
Confidence 5567889999999999999988 566666677889998888888887753 46677776533 457899
Q ss_pred HHHHHHhHhcCCCEEEeccC------CCHHHHH----HHHHhCCCCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL------ASKEEMK----AFCEISPLVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~------~s~eei~----~i~~~v~~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++..+ +|++ .|+ |+.| -.++++.+.+|
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~-lPiilYn~---P~~tg~~l~~~~~~~L 166 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSP-IPVVLYSV---PANTGLDLPVDAVVTL 166 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcC-CCEEEEeC---CcccCCCCCHHHHHHH
Confidence 99999999999999887432 3555554 4445555 6764 333 2222 14666555544
No 68
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=97.30 E-value=0.0031 Score=62.08 Aligned_cols=118 Identities=22% Similarity=0.299 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-++.++++.. + |++=+-+ .+.+++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~--------~GttGE~~~Ls~eEr~~v~~~~~~~~~----g--viaGvg~---~~t~~a 80 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFV--------NGTTGLGPSLSPEEKLENLKAVYDVTN----K--IIFQVGG---LNLDDA 80 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHTTCS----C--EEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHcC----C--EEEecCC---CCHHHH
Confidence 5567889999999999999988 566666677888988888888876643 3 4555432 356899
Q ss_pred HHHHHHhHhcCCCEEEecc----C-CCHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHh
Q 012815 243 LRRSRAFADAGADVLFIDA----L-ASKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEE 301 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~----~-~s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~e 301 (456)
|+.++..+++|||++++-. . ++.+++. ++++..+ +|+++ |+ |+.+ -.++++.+.+
T Consensus 81 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiilYn~---P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 81 IRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSP-HPVYLYNY---PTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCS-SCEEEEEC---HHHHSCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEEEEC---chhhCcCCCHHHHHh
Confidence 9999999999999987743 2 4656555 4555665 67643 43 2222 1478888876
No 69
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=97.28 E-value=0.0026 Score=64.91 Aligned_cols=123 Identities=21% Similarity=0.244 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++.. ...-|++=+- ..+.+|+
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v--------~GTTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg---~~st~ea 143 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIV--------GGTTGEGQLMSWDEHIMLIGHTVNCFG---GSIKVIGNTG---SNSTREA 143 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------cccccChhhCCHHHHHHHHHHHHHHhC---CCCeEEEecC---CCCHHHH
Confidence 5577889999999999999988 556666677889998888888887754 3566676553 3467999
Q ss_pred HHHHHHhHhcCCCEEEeccC----CCHHHHHHHHHhCC-CCcee-eeeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----ASKEEMKAFCEISP-LVPKM-ANMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~s~eei~~i~~~v~-~vP~~-~N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++.+.-+.+. .+|++ .|+ |+.| -.++++.+.++
T Consensus 144 i~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNi---P~rTg~~ls~e~l~~L 207 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNV---PGRTGQDIPPRAIFKL 207 (360)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEEC---HHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeC---CcccCCCCCHHHHHHH
Confidence 99999999999999887543 56677666555432 14553 342 2211 24676666554
No 70
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.20 E-value=0.022 Score=64.71 Aligned_cols=205 Identities=15% Similarity=0.106 Sum_probs=121.7
Q ss_pred cCChHHHHHHHHhCCcEEEecchHHhhhhcccCC---------C----------------CCCCHHHHHHHHHHHHhcc-
Q 012815 96 CFDALSAKLVEKSGFSFCFTSGFSISAARLALPD---------T----------------GFISYGEMVDQGQLITQAV- 149 (456)
Q Consensus 96 ayDalSArl~e~aGfdAI~vSG~avSas~lG~PD---------~----------------~~lt~~Eml~~~r~I~ra~- 149 (456)
.++...++.+..+|+-++.+.+........|.|. . ..-+++.+....+.+.+..
T Consensus 554 ~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~ 633 (1025)
T 1gte_A 554 TTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFP 633 (1025)
T ss_dssp GSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCC
Confidence 4455667777888998887655443211112221 0 1124556666666666655
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-CCccc-cCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKV-VSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-~gk~l-vp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
+.|+++-.=.|+ +.....+.+++++++|+++|.|.=.. |...+.. .|-.+ ...+...+-|++++++. +.++++
T Consensus 634 ~~~~i~~i~~g~-~~~~~~~~a~~~~~~g~d~iein~~~-P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~---~~Pv~v 708 (1025)
T 1gte_A 634 DNIVIASIMCSY-NKNDWMELSRKAEASGADALELNLSC-PHGMGERGMGLACGQDPELVRNICRWVRQAV---QIPFFA 708 (1025)
T ss_dssp TSEEEEEECCCS-CHHHHHHHHHHHHHTTCSEEEEECCC-BCCCC-----SBGGGCHHHHHHHHHHHHHHC---SSCEEE
T ss_pred CCCeEEEecCCC-CHHHHHHHHHHHHhcCCCEEEEECCC-CCCCCCCCcccccccCHHHHHHHHHHHHHhh---CCceEE
Confidence 688888764442 57788889999999999999995431 2211110 12222 34555555566555543 245555
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEe----------------------ccC---------CC----HHHHHHHH
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFI----------------------DAL---------AS----KEEMKAFC 272 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi----------------------e~~---------~s----~eei~~i~ 272 (456)
--+.+. ++..+-++++.++|+|.|.+ ++. .. .+.++++.
T Consensus 709 K~~~~~------~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~ 782 (1025)
T 1gte_A 709 KLTPNV------TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIA 782 (1025)
T ss_dssp EECSCS------SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHH
T ss_pred EeCCCh------HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHH
Confidence 555433 23456688889999999988 221 11 25678888
Q ss_pred HhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 273 EISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 273 ~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.++.+|++.| ||-...-...++-++|...|..+..++.
T Consensus 783 ~~~~~ipvi~~----GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 783 RALPGFPILAT----GGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp HHSTTCCEEEE----SSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHcCCCCEEEe----cCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 88855887755 3432222334444589999999887665
No 71
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.18 E-value=0.015 Score=53.31 Aligned_cols=143 Identities=17% Similarity=0.202 Sum_probs=87.5
Q ss_pred HHHHHHHhc-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 140 DQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 140 ~~~r~I~ra-~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
..++.+++. .++||.+|.=.-++. ...++.+.++||++|.+=+.. + ++... .++++.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~----~~~~~~~~~~Gad~v~v~~~~--------------~-~~~~~---~~~~~~ 99 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGG----HFESQLLFDAGADYVTVLGVT--------------D-VLTIQ---SCIRAA 99 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCH----HHHHHHHHHTTCSEEEEETTS--------------C-HHHHH---HHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccch----HHHHHHHHhcCCCEEEEeCCC--------------C-hhHHH---HHHHHH
Confidence 456666665 579996664333332 123788899999999994431 1 22222 222222
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc--------CCCHHHHHHHHHhCCCCceeeeeeccCCC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGK 290 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~ 290 (456)
++.|...++ +.... ++.+++++.+.++|+|.|.+.. ....+.++++.+.++.+|+.+ .+|-
T Consensus 100 ~~~g~~~~v----~~~~~---~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~----~gGI 168 (211)
T 3f4w_A 100 KEAGKQVVV----DMICV---DDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAV----AGGI 168 (211)
T ss_dssp HHHTCEEEE----ECTTC---SSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEE----ESSC
T ss_pred HHcCCeEEE----EecCC---CCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEE----ECCC
Confidence 333433332 11111 1236788899999999998742 125678888888765455432 3454
Q ss_pred CCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 291 TPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 291 tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+ .-+..++.+.|+..++.|..++.+
T Consensus 169 ~-~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 169 S-SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp C-TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred C-HHHHHHHHHcCCCEEEECHHHcCC
Confidence 4 357889999999999999887754
No 72
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=97.17 E-value=0.027 Score=56.00 Aligned_cols=88 Identities=13% Similarity=-0.050 Sum_probs=54.9
Q ss_pred HHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEec---chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS---GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vS---G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
-|-++++.+ +.+..-++-.|++.+++|.++|-+= +.-..+ ..| +-+...++.+++|++.+++||++.
T Consensus 15 ~~~~~~kgg---v~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~-~~g------~~R~~~~~~i~~i~~~v~iPvl~k 84 (297)
T 4adt_A 15 GWCEMLKGG---VIMDVKNVEQAKIAEKAGAIGVMILENIPSELRN-TDG------VARSVDPLKIEEIRKCISINVLAK 84 (297)
T ss_dssp HHHHTTTTC---EEEEESSHHHHHHHHHHTCSEEEECCCCC------CCC------CCCCCCHHHHHHHHTTCCSEEEEE
T ss_pred hHHHHhcCC---cccCCCcHHHHHHHHHcCCCEEEEecCCCCcchh-cCC------cccCCCHHHHHHHHHhcCCCEEEe
Confidence 355555433 4457778889999999999986532 101111 112 111223456678888899999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEE
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGII 183 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~ 183 (456)
.-.+| ..-++.++++||++|.
T Consensus 85 ~~i~~------ide~qil~aaGAD~Id 105 (297)
T 4adt_A 85 VRIGH------FVEAQILEELKVDMLD 105 (297)
T ss_dssp EETTC------HHHHHHHHHTTCSEEE
T ss_pred ccCCc------HHHHHHHHHcCCCEEE
Confidence 54444 4455667789999993
No 73
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.14 E-value=0.0089 Score=55.24 Aligned_cols=165 Identities=18% Similarity=0.158 Sum_probs=95.2
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCC---CC-HHHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGY---GN-AMNVKRTVKGYIK 176 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGY---G~-~~nv~rtVk~l~~ 176 (456)
-|+.++++|++.+.+. + ...++.|++.+++|++.+.-..| +- ...-.+.++.+.+
T Consensus 28 ~a~~~~~~Ga~~i~~~-----------------~----~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~ 86 (223)
T 1y0e_A 28 MALAAYEGGAVGIRAN-----------------T----KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIE 86 (223)
T ss_dssp HHHHHHHHTCSEEEEE-----------------S----HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHH
T ss_pred HHHHHHHCCCeeeccC-----------------C----HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHh
Confidence 3455677899887542 1 24467777888999986543222 11 0012345667889
Q ss_pred hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 177 AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
+|++.|++--... + .+-.+..+++++++. . . +++.+..... ..+| ++.+.++|+|.
T Consensus 87 ~Gad~v~l~~~~~-----~---~p~~~~~~~i~~~~~---~---~-~~~~v~~~~~-----t~~e----~~~~~~~G~d~ 142 (223)
T 1y0e_A 87 SQCEVIALDATLQ-----Q---RPKETLDELVSYIRT---H---A-PNVEIMADIA-----TVEE----AKNAARLGFDY 142 (223)
T ss_dssp HTCSEEEEECSCS-----C---CSSSCHHHHHHHHHH---H---C-TTSEEEEECS-----SHHH----HHHHHHTTCSE
T ss_pred CCCCEEEEeeecc-----c---CcccCHHHHHHHHHH---h---C-CCceEEecCC-----CHHH----HHHHHHcCCCE
Confidence 9999998843210 0 010233455555433 2 2 3555554332 2333 44578999999
Q ss_pred EEecc-------------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 257 LFIDA-------------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 257 Ifie~-------------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
|.+-. .++.+.++++.+.+. +|+.++ +|-...-+..++.++|+..|..+..++.
T Consensus 143 i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~-ipvia~----GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 143 IGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD-AKVIAE----GNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp EECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC-SEEEEE----SSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC-CCEEEe----cCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 87521 112346777777765 676543 3431113457788899999999987665
No 74
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=97.14 E-value=0.0019 Score=64.32 Aligned_cols=104 Identities=17% Similarity=0.233 Sum_probs=76.7
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||+++.-...+.+|..+-+++++++.. ...-|++=+- ..+.+++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpViaGvg---~~~t~~a 91 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILL--------AGTTAESPTLTHDEELELFAAVQKVVN---GRVPLIAGVG---TNDTRDS 91 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHSC---SSSCEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CcCHHHH
Confidence 4467889999999999999998 566666677889999888888887753 3555666553 3457899
Q ss_pred HHHHHHhHhcCC-CEEEeccC----CCHHHHH----HHHHhCCCCcee
Q 012815 243 LRRSRAFADAGA-DVLFIDAL----ASKEEMK----AFCEISPLVPKM 281 (456)
Q Consensus 243 I~RakAy~eAGA-D~Ifie~~----~s~eei~----~i~~~v~~vP~~ 281 (456)
|+.++...++|| |++++-.+ ++.+++. +++++.+ +|++
T Consensus 92 i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~-lPii 138 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASD-LPII 138 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCS-SCEE
T ss_pred HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEE
Confidence 999999999997 98877542 4555554 4444554 6764
No 75
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=97.14 E-value=0.002 Score=63.97 Aligned_cols=104 Identities=18% Similarity=0.219 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++|+.+ ||.++.-...+.+|..+-+++++++. | ..-|++=+- ..+.+++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Lt~~Er~~v~~~~v~~~---g-rvpViaGvg---~~~t~~a 91 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTV--------LGILGEAPKLDAAEAEAVATRFIKRA---K-SMQVIVGVS---APGFAAM 91 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------STGGGTGGGSCHHHHHHHHHHHHHHC---T-TSEEEEECC---CSSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEe--------CccCcChhhCCHHHHHHHHHHHHHHc---C-CCcEEEecC---CCCHHHH
Confidence 4577899999999999999988 55666667788899888888888775 2 456666553 3467899
Q ss_pred HHHHHHhHhcCCCEEEeccC---CCHHHHH----HHHHhCC-CCcee
Q 012815 243 LRRSRAFADAGADVLFIDAL---ASKEEMK----AFCEISP-LVPKM 281 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~----~i~~~v~-~vP~~ 281 (456)
|+.++..+++|||++++-.+ ++.+++. +++++.+ .+|++
T Consensus 92 i~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPii 138 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWV 138 (313)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEE
Confidence 99999999999999987432 4555544 4445554 25664
No 76
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.13 E-value=0.05 Score=49.45 Aligned_cols=151 Identities=21% Similarity=0.208 Sum_probs=90.8
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHH---HHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVD---QGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~---~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
.++.+.++|+++|-+. .|+ .+..+... .++.+++..++||+++ ..++.+.++
T Consensus 31 ~~~~~~~~G~~~i~l~----------~~~---~~~~~~~~~~~~l~~~~~~~~v~v~v~------------~~~~~a~~~ 85 (215)
T 1xi3_A 31 SVREALEGGATAIQMR----------IKN---APTREMYEIGKTLRQLTREYDALFFVD------------DRVDVALAV 85 (215)
T ss_dssp HHHHHHHTTCSEEEEC----------CCS---CCHHHHHHHHHHHHHHHHHTTCEEEEE------------SCHHHHHHH
T ss_pred HHHHHHHCCCCEEEEC----------CCC---CCHHHHHHHHHHHHHHHHHcCCeEEEc------------ChHHHHHHc
Confidence 3566777899887654 122 24444444 4445555667899986 123567789
Q ss_pred CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
|+++|+++.... +.+ .++++ . .+.++...+. ..+|+ +.+.++|+|.|
T Consensus 86 gad~v~l~~~~~-------------~~~-~~~~~------~----~~~~~~v~~~-----t~~e~----~~~~~~g~d~i 132 (215)
T 1xi3_A 86 DADGVQLGPEDM-------------PIE-VAKEI------A----PNLIIGASVY-----SLEEA----LEAEKKGADYL 132 (215)
T ss_dssp TCSEEEECTTSC-------------CHH-HHHHH------C----TTSEEEEEES-----SHHHH----HHHHHHTCSEE
T ss_pred CCCEEEECCccC-------------CHH-HHHHh------C----CCCEEEEecC-----CHHHH----HHHHhcCCCEE
Confidence 999999975321 222 22222 1 1333333221 22342 33567899999
Q ss_pred Eecc-----------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 258 FIDA-----------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 258 fie~-----------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
++.. ..+.+.++++.+.++ +|+++ .+|-+ .-+..++.++|+..|..+..++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~pvia----~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 133 GAGSVFPTKTKEDARVIGLEGLRKIVESVK-IPVVA----IGGIN-KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp EEECSSCC----CCCCCHHHHHHHHHHHCS-SCEEE----ESSCC-TTTHHHHHTTTCSEEEESHHHHT
T ss_pred EEcCCccCCCCCCCCCcCHHHHHHHHHhCC-CCEEE----ECCcC-HHHHHHHHHcCCCEEEEhHHHhC
Confidence 8743 124567777777664 66543 24544 35778899999999999988765
No 77
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.12 E-value=0.032 Score=54.56 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=117.4
Q ss_pred HHHHHHHHhCCCce--eecccCCh--HH----HHHHHHhCCcEEEec-ch--------HHhhhh-cccCCCCCCCHHHHH
Q 012815 78 AKSLRQILELPGVH--QGPACFDA--LS----AKLVEKSGFSFCFTS-GF--------SISAAR-LALPDTGFISYGEMV 139 (456)
Q Consensus 78 a~~Lr~ll~~~~~l--v~pgayDa--lS----Arl~e~aGfdAI~vS-G~--------avSas~-lG~PD~~~lt~~Eml 139 (456)
.+.|.++.+++++. ....+-|+ -. .+.++++|.|.|=++ -+ -+-.+. .-+ . .-++++.++
T Consensus 6 ~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL-~-~G~~~~~~~ 83 (267)
T 3vnd_A 6 QAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSL-A-AGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHH-H-TTCCHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHH-H-cCCCHHHHH
Confidence 35676666555542 22244443 22 345677899999887 11 111110 000 0 127888999
Q ss_pred HHHHHHHhc-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHH
Q 012815 140 DQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (456)
Q Consensus 140 ~~~r~I~ra-~~iPVIaD~DtGYG~~~---nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~ 215 (456)
+.++.+++. +++||+.= +|-|+. .+.+-++.+.++|++|+.+=|-. .||..+-+++++
T Consensus 84 ~~v~~ir~~~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp---------------~ee~~~~~~~~~ 145 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLL---LYANLVFANGIDEFYTKAQAAGVDSVLIADVP---------------VEESAPFSKAAK 145 (267)
T ss_dssp HHHHHHHHHCTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC---------------GGGCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC---------------HhhHHHHHHHHH
Confidence 999999887 78999873 777762 24677899999999999997742 233333333332
Q ss_pred HHhHhhCCCeE-EEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC------CC------HHHHHHHHHhCCCCceee
Q 012815 216 DARKESGSDIV-IVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------AS------KEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 216 ~Ar~~~G~dfv-IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~------~s------~eei~~i~~~v~~vP~~~ 282 (456)
+ .|.+.+ +++=|.. .+|.+.+.+.+-+.||+.++ .+ .+.++++.+..+ +|+.+
T Consensus 146 ~----~gl~~i~liaP~t~---------~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~-~pv~v 211 (267)
T 3vnd_A 146 A----HGIAPIFIAPPNAD---------ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNA-PPPLL 211 (267)
T ss_dssp H----TTCEEECEECTTCC---------HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTC-CCEEE
T ss_pred H----cCCeEEEEECCCCC---------HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-CCEEE
Confidence 2 244433 4433322 36888888887777877432 11 234455544443 56653
Q ss_pred eeeccCCCCCCCCHHHHH---hcCCCEEeccchHHHHH
Q 012815 283 NMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 283 N~~~~~g~tp~lt~~eL~---elGv~~Vs~p~~ll~aa 317 (456)
+.|- -+.++.+ +.|..-|+.|+.+.+..
T Consensus 212 ----GfGI---~~~e~~~~~~~~gADgvVVGSaiv~~i 242 (267)
T 3vnd_A 212 ----GFGI---AEPEQVRAAIKAGAAGAISGSAVVKII 242 (267)
T ss_dssp ----CSSC---CSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred ----ECCc---CCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 2232 1455544 78999999999877644
No 78
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.12 E-value=0.0035 Score=59.00 Aligned_cols=173 Identities=12% Similarity=0.096 Sum_probs=101.6
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-|+.++++|++++.++....+ ..+.+ ..+..++.|+ .+++||++.. |.-+.. .++.+.++||+
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~--~~~~~--------~~~~~i~~i~-~~~ipvi~~G--gi~~~~----~~~~~~~~Gad 97 (241)
T 1qo2_A 35 LVEKLIEEGFTLIHVVDLSNA--IENSG--------ENLPVLEKLS-EFAEHIQIGG--GIRSLD----YAEKLRKLGYR 97 (241)
T ss_dssp HHHHHHHTTCCCEEEEEHHHH--HHCCC--------TTHHHHHHGG-GGGGGEEEES--SCCSHH----HHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEEeccccc--ccCCc--------hhHHHHHHHH-hcCCcEEEEC--CCCCHH----HHHHHHHCCCC
Confidence 367788899999999854322 11111 1245667777 7789999973 333443 34456668999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE---EecchhhcccHH-----HHHHHHHHhHhc
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTDSRQALSLE-----ESLRRSRAFADA 252 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi---ARTDA~~~~~ld-----eAI~RakAy~eA 252 (456)
+|++-... +-.+ +.+.++ +..| +.+++ .|..-....+.+ ...++++.+.++
T Consensus 98 ~V~lg~~~------------l~~p-~~~~~~-------~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~ 156 (241)
T 1qo2_A 98 RQIVSSKV------------LEDP-SFLKSL-------REID-VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEY 156 (241)
T ss_dssp EEEECHHH------------HHCT-THHHHH-------HTTT-CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTT
T ss_pred EEEECchH------------hhCh-HHHHHH-------HHcC-CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhC
Confidence 99884432 1111 122222 1123 33332 221000111111 346778888899
Q ss_pred CCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc-----C-CCEEeccchHHHH
Q 012815 253 GADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-----G-FKLVAYPLSLIGV 316 (456)
Q Consensus 253 GAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el-----G-v~~Vs~p~~ll~a 316 (456)
|++.|++... ++.+.++++.+.++ +|+.++ +|-...-...++.++ | +.-|+.+..++..
T Consensus 157 G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~-iPvia~----GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 157 GLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAE-VKVLAA----GGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp TCCEEEEEETTHHHHTCCCCHHHHHHHHHHHT-CEEEEE----SSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred CCCEEEEEeecccccCCcCCHHHHHHHHHhcC-CcEEEE----CCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 9999998653 35678888888775 777654 343211234667777 9 9999998877654
No 79
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.05 E-value=0.00059 Score=65.81 Aligned_cols=181 Identities=10% Similarity=0.120 Sum_probs=107.7
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaa 180 (456)
.+.+.++|.|+|-+++ | ..++++.+++.++++.+ .++||+. .+|. |+. ++|++
T Consensus 26 ~~~l~~~GaD~IelG~---S---------~g~t~~~~~~~v~~ir~-~~~Pivl---~~y~~n~i----------~~gvD 79 (234)
T 2f6u_A 26 IKAVADSGTDAVMISG---T---------QNVTYEKARTLIEKVSQ-YGLPIVV---EPSDPSNV----------VYDVD 79 (234)
T ss_dssp HHHHHTTTCSEEEECC---C---------TTCCHHHHHHHHHHHTT-SCCCEEE---CCSSCCCC----------CCCSS
T ss_pred HHHHHHcCCCEEEECC---C---------CCCCHHHHHHHHHHhcC-CCCCEEE---ecCCcchh----------hcCCC
Confidence 3567788999999997 1 34789999999999988 8999998 6666 432 78999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHH----HHHHHHhHhhC-CCeE-----EEEecch--h-h--cccHHHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRI----KAAVDARKESG-SDIV-----IVARTDS--R-Q--ALSLEESLRR 245 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI----~AA~~Ar~~~G-~dfv-----IiARTDA--~-~--~~~ldeAI~R 245 (456)
|+.|=|=. +-.. ..++- ..+.+-. +++.+....++ .+++ |++=+-. + . ....+. +|
T Consensus 80 g~iipdLp-~ee~-----~~~~~-g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~--e~ 150 (234)
T 2f6u_A 80 YLFVPTVL-NSAD-----GDWIT-GKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDK--EL 150 (234)
T ss_dssp EEEEEEET-TBSB-----GGGTT-HHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCH--HH
T ss_pred EEEEcccC-CCCC-----HHHHh-hhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCH--HH
Confidence 99997743 1111 11110 1111111 11111110000 2333 3322110 0 0 001122 89
Q ss_pred HHHhHhcCC-----CEEEecc---CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012815 246 SRAFADAGA-----DVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 246 akAy~eAGA-----D~Ifie~---~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa 317 (456)
+++|+++|+ -.||+++ ....+.++++.+..+.+|+.+ .+ |-...=..+++.+ |+..|+.|+.+...-
T Consensus 151 ~~~~a~~g~~~l~~~~Vyl~~~G~~~~~~~i~~i~~~~~~~Pv~v---Gg-GI~s~e~a~~~~~-gAd~VIVGSa~v~~~ 225 (234)
T 2f6u_A 151 AASYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKKVLDKARLFY---GG-GIDSREKAREMLR-YADTIIVGNVIYEKG 225 (234)
T ss_dssp HHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEE---ES-CCCSHHHHHHHHH-HSSEEEECHHHHHHC
T ss_pred HHHHHHhhhhhcCCCEEEEeCCCCcchHHHHHHHHHhCCCCCEEE---Ee-cCCCHHHHHHHHh-CCCEEEEChHHHhCH
Confidence 999999999 8889887 245778899988872366543 23 3211123466677 999999999877654
Q ss_pred HHHHH
Q 012815 318 VRAMQ 322 (456)
Q Consensus 318 ~~A~~ 322 (456)
-+|++
T Consensus 226 ~~~~~ 230 (234)
T 2f6u_A 226 IDAFL 230 (234)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 80
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.04 E-value=0.1 Score=51.10 Aligned_cols=199 Identities=15% Similarity=0.107 Sum_probs=119.5
Q ss_pred HHHHHHHHhCCCce--eecccCCh---HH---HHHHHHhCCcEEEec-ch--HHh------h-hhcccCCCCCCCHHHHH
Q 012815 78 AKSLRQILELPGVH--QGPACFDA---LS---AKLVEKSGFSFCFTS-GF--SIS------A-ARLALPDTGFISYGEMV 139 (456)
Q Consensus 78 a~~Lr~ll~~~~~l--v~pgayDa---lS---Arl~e~aGfdAI~vS-G~--avS------a-s~lG~PD~~~lt~~Eml 139 (456)
.+.|.++.+++++. ....+-|+ .+ ++.++++|.|.|=++ -+ -++ . +..-+. .-++++..+
T Consensus 8 ~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~--~G~~~~~~~ 85 (271)
T 3nav_A 8 QALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALA--AKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHH--TTCCHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH--cCCCHHHHH
Confidence 45677777666542 22244443 23 344567899999887 22 111 0 000010 126888999
Q ss_pred HHHHHHHhc-cCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHH
Q 012815 140 DQGQLITQA-VSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (456)
Q Consensus 140 ~~~r~I~ra-~~iPVIaD~DtGYG~~~---nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~ 215 (456)
+.++.+++. .++|+++= ||-|+. .+.+-++...++|++|+.+=|-. .||..+-++++.
T Consensus 86 ~~v~~~r~~~~~~Pivlm---~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp---------------~ee~~~~~~~~~ 147 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLL---MYANLVYARGIDDFYQRCQKAGVDSVLIADVP---------------TNESQPFVAAAE 147 (271)
T ss_dssp HHHHHHHHHCTTSCEEEE---ECHHHHHHTCHHHHHHHHHHHTCCEEEETTSC---------------GGGCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEE---ecCcHHHHHhHHHHHHHHHHCCCCEEEECCCC---------------HHHHHHHHHHHH
Confidence 999999887 78999873 677762 24677899999999999997742 234322222222
Q ss_pred HHhHhhCCCeE-EEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC------CC------HHHHHHHHHhCCCCceee
Q 012815 216 DARKESGSDIV-IVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------AS------KEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 216 ~Ar~~~G~dfv-IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~------~s------~eei~~i~~~v~~vP~~~ 282 (456)
+.|.+++ +++=|.. .+|.+...+.+.+.||.-+. .+ .+.++++.+..+ +|+.+
T Consensus 148 ----~~gl~~I~lvap~t~---------~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v 213 (271)
T 3nav_A 148 ----KFGIQPIFIAPPTAS---------DETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDA-PPALL 213 (271)
T ss_dssp ----HTTCEEEEEECTTCC---------HHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTC-CCEEE
T ss_pred ----HcCCeEEEEECCCCC---------HHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcC-CCEEE
Confidence 2244544 4443332 26888888888888887432 11 234555555554 67654
Q ss_pred eeeccCCCCCCCCHHHHH---hcCCCEEeccchHHHHH
Q 012815 283 NMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 283 N~~~~~g~tp~lt~~eL~---elGv~~Vs~p~~ll~aa 317 (456)
.+ |- -++++.+ +.|..-|+.|+.+.+..
T Consensus 214 ---Gf-GI---st~e~~~~~~~~gADgvIVGSAiv~~i 244 (271)
T 3nav_A 214 ---GF-GI---SEPAQVKQAIEAGAAGAISGSAVVKII 244 (271)
T ss_dssp ---CS-SC---CSHHHHHHHHHTTCSEEEESHHHHHHH
T ss_pred ---EC-CC---CCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 22 32 1455555 78999999999887654
No 81
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.04 E-value=0.018 Score=56.22 Aligned_cols=196 Identities=15% Similarity=0.106 Sum_probs=116.6
Q ss_pred HHHHHHhCCCc----eeecccCChH----HHHHHHHhCCcEEEec-chH--------H-hhhhcccCCCCCCCHHHHHHH
Q 012815 80 SLRQILELPGV----HQGPACFDAL----SAKLVEKSGFSFCFTS-GFS--------I-SAARLALPDTGFISYGEMVDQ 141 (456)
Q Consensus 80 ~Lr~ll~~~~~----lv~pgayDal----SArl~e~aGfdAI~vS-G~a--------v-Sas~lG~PD~~~lt~~Eml~~ 141 (456)
.|.++.+++++ ++++|--|.- -++.++++ +|+|-++ .+. + +++..-+ . ..++++.+++.
T Consensus 6 ~f~~~~~~~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al-~-~G~~~~~~~~~ 82 (271)
T 1ujp_A 6 AFAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELAL-R-KGMSVQGALEL 82 (271)
T ss_dssp HHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHH-H-TTCCHHHHHHH
T ss_pred HHHHHHHcCCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHH-H-cCCCHHHHHHH
Confidence 66666655543 3556655543 23445566 9998886 221 0 0000001 0 11788999999
Q ss_pred HHHHHhccCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 142 GQLITQAVSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 142 ~r~I~ra~~iPVIaD~DtGYG~~~---nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
++.|.+.+++||++ + +|-|+. .+.+-++.+.++|++|+.+=|-. .+|..+-++++++.
T Consensus 83 v~~ir~~~~~Pii~-m--~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~---------------~ee~~~~~~~~~~~- 143 (271)
T 1ujp_A 83 VREVRALTEKPLFL-M--TYLNPVLAWGPERFFGLFKQAGATGVILPDLP---------------PDEDPGLVRLAQEI- 143 (271)
T ss_dssp HHHHHHHCCSCEEE-E--CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCC---------------GGGCHHHHHHHHHH-
T ss_pred HHHHHhcCCCCEEE-E--ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCC---------------HHHHHHHHHHHHHc-
Confidence 99999888999999 3 776642 24677788899999999997642 13333333333322
Q ss_pred HhhCCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC------------CCHHHHHHHHHhCCCCceeeeee
Q 012815 219 KESGSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------------ASKEEMKAFCEISPLVPKMANML 285 (456)
Q Consensus 219 ~~~G~d-fvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~------------~s~eei~~i~~~v~~vP~~~N~~ 285 (456)
|-+ ..+++-|.. .+|.+++++.+...+|+.++ +..+.++++.+... +|+.+
T Consensus 144 ---gl~~i~liap~s~---------~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~-~Pv~v--- 207 (271)
T 1ujp_A 144 ---GLETVFLLAPTST---------DARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTA-LPVAV--- 207 (271)
T ss_dssp ---TCEEECEECTTCC---------HHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTCC-SCEEE---
T ss_pred ---CCceEEEeCCCCC---------HHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcC-CCEEE---
Confidence 322 344544432 26778888777777776531 11356667766553 67654
Q ss_pred ccCCCCCCCCHHHHHh-cCCCEEeccchHHHHH
Q 012815 286 EGGGKTPILNPLELEE-LGFKLVAYPLSLIGVS 317 (456)
Q Consensus 286 ~~~g~tp~lt~~eL~e-lGv~~Vs~p~~ll~aa 317 (456)
.+ |- -+.++.++ .|..-|+.|+.+.+..
T Consensus 208 Gf-GI---~t~e~a~~~~~ADgVIVGSAi~~~~ 236 (271)
T 1ujp_A 208 GF-GV---SGKATAAQAAVADGVVVGSALVRAL 236 (271)
T ss_dssp ES-CC---CSHHHHHHHTTSSEEEECHHHHHHH
T ss_pred Ec-CC---CCHHHHHHhcCCCEEEEChHHhccc
Confidence 22 32 13544444 7899999999888764
No 82
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.03 E-value=0.013 Score=56.02 Aligned_cols=180 Identities=16% Similarity=0.105 Sum_probs=110.6
Q ss_pred ccCChH-HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCC-----CCHHHHH
Q 012815 95 ACFDAL-SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGY-----GNAMNVK 168 (456)
Q Consensus 95 gayDal-SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGY-----G~~~nv~ 168 (456)
+..|.. -++.+++.|++++.+.. ++... .... ...++|+++.++.|. .......
T Consensus 43 ~~~~~~~~~~~~~~~g~~~i~~~~-~~~~~---~~~~----------------~~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 43 GLIDIRKTVNDVAEGGANAVLLHK-GIVRH---GHRG----------------YGKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp TSSSHHHHHHHHHHHTCSEEEECH-HHHHS---CCCS----------------SSCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred chhhHHHHHHHHHhcCCCEEEeCH-HHHHH---HHHh----------------hcCCCCEEEEEcCCCcCCCCcccchHH
Confidence 334443 34566788999998764 21110 0000 012588988888774 1111124
Q ss_pred HHHHHHHHhCccEE--EeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc-----ccHHH
Q 012815 169 RTVKGYIKAGFAGI--ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA-----LSLEE 241 (456)
Q Consensus 169 rtVk~l~~AGaaGI--~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~-----~~lde 241 (456)
+.+++.+++||+.| ++-+.. .+.+++.+.++..+++.+..|..+++.. .+.+. .+. +
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~-------------~~~~~~~~~~~~v~~~~~~~g~~viv~~--~~~G~~l~~~~~~-~ 166 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGS-------------DEDWEAYRDLGMIAETCEYWGMPLIAMM--YPRGKHIQNERDP-E 166 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETS-------------TTHHHHHHHHHHHHHHHHHHTCCEEEEE--EECSTTCSCTTCH-H
T ss_pred HHHHHHHHcCCCEEEEEEecCC-------------CCHHHHHHHHHHHHHHHHHcCCCEEEEe--CCCCcccCCCCCH-h
Confidence 56678888999999 543431 1456777777777777766666666542 21111 122 2
Q ss_pred HHHHH-HHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-------HHHHHhcCCCEEeccchH
Q 012815 242 SLRRS-RAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN-------PLELEELGFKLVAYPLSL 313 (456)
Q Consensus 242 AI~Ra-kAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt-------~~eL~elGv~~Vs~p~~l 313 (456)
.++.+ +...++|||.|.+....+.+.++++++.++ +|+.+. ||-.+ -+ ..++.+.|+.-|..+..+
T Consensus 167 ~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~~~~-ipvva~----GGi~~-~~~~~~~~~~~~~~~~Ga~gv~vg~~i 240 (273)
T 2qjg_A 167 LVAHAARLGAELGADIVKTSYTGDIDSFRDVVKGCP-APVVVA----GGPKT-NTDEEFLQMIKDAMEAGAAGVAVGRNI 240 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHHHCS-SCEEEE----CCSCC-SSHHHHHHHHHHHHHHTCSEEECCHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCC-CCEEEE----eCCCC-CCHHHHHHHHHHHHHcCCcEEEeeHHh
Confidence 34444 788899999998875567888999998875 676542 34332 14 555568999999998887
Q ss_pred HHH
Q 012815 314 IGV 316 (456)
Q Consensus 314 l~a 316 (456)
+.+
T Consensus 241 ~~~ 243 (273)
T 2qjg_A 241 FQH 243 (273)
T ss_dssp HTS
T ss_pred hCC
Confidence 653
No 83
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.99 E-value=0.018 Score=58.34 Aligned_cols=152 Identities=19% Similarity=0.175 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+.+++.+++|++||.|--.- .| ||...-+|. +... +-..+-|++++++ .|++ .|..|.-
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGs-lenr~r~~~eiv~avr~~---vg~~-~v~vrls 235 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGS-VENRARLVLEVVDAVCNE---WSAD-RIGIRVS 235 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHH---SCGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcc-hhcChhhHHHHHHHHHHh---cCCC-cEEEEEc
Confidence 356677788889999999995431 12 222222221 2111 1233334444444 3444 4555543
Q ss_pred hh---h-----cccHHHHHHHHHHhHhcCCCEEEeccC-------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH
Q 012815 233 SR---Q-----ALSLEESLRRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (456)
Q Consensus 233 A~---~-----~~~ldeAI~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~ 297 (456)
.. . ...++++++-++++.++|+|.|-+... ...+.++++.+.++ +|++.| ++-++ -..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~-iPvi~~----Ggit~-~~a~ 309 (364)
T 1vyr_A 236 PIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH-GVIIGA----GAYTA-EKAE 309 (364)
T ss_dssp CSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC-SEEEEE----SSCCH-HHHH
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC-CCEEEE----CCcCH-HHHH
Confidence 32 1 225788999999999999999988652 13456778888886 787765 23211 1234
Q ss_pred HHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 298 ELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 298 eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
++-+.| +..|.++-.++.-- +....+++|.
T Consensus 310 ~~l~~g~aD~V~~gR~~l~~P-----~~~~~~~~g~ 340 (364)
T 1vyr_A 310 DLIGKGLIDAVAFGRDYIANP-----DLVARLQKKA 340 (364)
T ss_dssp HHHHTTSCSEEEESHHHHHCT-----THHHHHHHTC
T ss_pred HHHHCCCccEEEECHHHHhCh-----hHHHHHHcCC
Confidence 455556 99999987665432 4455566554
No 84
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.97 E-value=0.039 Score=55.01 Aligned_cols=197 Identities=13% Similarity=0.041 Sum_probs=111.2
Q ss_pred CCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc---cCCcEEEeCCC---------------------CCCCH
Q 012815 109 GFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA---VSIPVIGDGDN---------------------GYGNA 164 (456)
Q Consensus 109 GfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra---~~iPVIaD~Dt---------------------GYG~~ 164 (456)
|+-.|.+.+..++....++|..-.+--++.+..-+.++++ .+.++++=+=. ++..+
T Consensus 52 G~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p 131 (338)
T 1z41_A 52 QVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATP 131 (338)
T ss_dssp TCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCC
T ss_pred CCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCC
Confidence 7877777665554333556654334345555555555432 23454443321 12222
Q ss_pred ------------HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccC-HHHHHHHHHHHHHHhHh
Q 012815 165 ------------MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVS-REEAVMRIKAAVDARKE 220 (456)
Q Consensus 165 ------------~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp-~ee~v~kI~AA~~Ar~~ 220 (456)
....+.++.++++|++||.|--.. .| ||...-+| .+.. .+-..+-|++++++.
T Consensus 132 ~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGG-slenr~r~~~eiv~avr~~v-- 208 (338)
T 1z41_A 132 VEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGG-SPENRYRFLREIIDEVKQVW-- 208 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCc-chhhhHHHHHHHHHHHHHHc--
Confidence 345677788889999999986531 02 23322223 1211 122344455554443
Q ss_pred hCCCeEEEEecchh----hcccHHHHHHHHHHhHhcCCCEEEeccC----------C--CHHHHHHHHHhCCCCceeeee
Q 012815 221 SGSDIVIVARTDSR----QALSLEESLRRSRAFADAGADVLFIDAL----------A--SKEEMKAFCEISPLVPKMANM 284 (456)
Q Consensus 221 ~G~dfvIiARTDA~----~~~~ldeAI~RakAy~eAGAD~Ifie~~----------~--s~eei~~i~~~v~~vP~~~N~ 284 (456)
++-|..|.... .....+++++-++++.++|+|.|-+... + ..+.++++.+.+. +|++.|
T Consensus 209 ---~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~- 283 (338)
T 1z41_A 209 ---DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD-MATGAV- 283 (338)
T ss_dssp ---CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC-CEEEEC-
T ss_pred ---CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC-CCEEEE-
Confidence 45555564331 1245789999999999999999986431 1 2456777877775 787654
Q ss_pred eccCCCCCCCCHHHHHhcC-CCEEeccchHHHH
Q 012815 285 LEGGGKTPILNPLELEELG-FKLVAYPLSLIGV 316 (456)
Q Consensus 285 ~~~~g~tp~lt~~eL~elG-v~~Vs~p~~ll~a 316 (456)
++-...-..+++-+.| +..|.++-.++.-
T Consensus 284 ---Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~n 313 (338)
T 1z41_A 284 ---GMITDGSMAEEILQNGRADLIFIGRELLRD 313 (338)
T ss_dssp ---SSCCSHHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred ---CCCCCHHHHHHHHHcCCceEEeecHHHHhC
Confidence 2321112245566677 9999998776543
No 85
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.96 E-value=0.0087 Score=60.27 Aligned_cols=197 Identities=15% Similarity=0.076 Sum_probs=115.4
Q ss_pred ccCChHHHHHHHHhCC-cEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh--ccCCcEEEeCCCCCCCHHHHHHHH
Q 012815 95 ACFDALSAKLVEKSGF-SFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ--AVSIPVIGDGDNGYGNAMNVKRTV 171 (456)
Q Consensus 95 gayDalSArl~e~aGf-dAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r--a~~iPVIaD~DtGYG~~~nv~rtV 171 (456)
|+-|..-..++.+.|- ..+++....... +-+.|. +++.+ ..+.|+++=+= | .++....+.+
T Consensus 13 g~td~~~r~~~r~~Gg~gli~te~~~~~~--~~~~~~------------~~~~~~~~~~~p~~vQL~-g-~~p~~~~~aA 76 (350)
T 3b0p_A 13 DRTDRHFRFLVRQVSLGVRLYTEMTVDQA--VLRGNR------------ERLLAFRPEEHPIALQLA-G-SDPKSLAEAA 76 (350)
T ss_dssp TTSSHHHHHHHHHHCSSSBEECCCEEHHH--HHHSCH------------HHHHCCCGGGCSEEEEEE-C-SCHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCEEEeCCEEech--hhcCCH------------HHHhccCCCCCeEEEEeC-C-CCHHHHHHHH
Confidence 5667666666767775 555544322221 111111 12332 33578777652 2 2577888999
Q ss_pred HHHHHhCccEEEeCCCC-CCCCccCCCCccc-cCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012815 172 KGYIKAGFAGIILEDQV-SPKGCGHTRGRKV-VSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (456)
Q Consensus 172 k~l~~AGaaGI~IEDq~-~pK~CGH~~gk~l-vp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy 249 (456)
+.+.++|+++|.|.-.. .++.+....|..+ -..+...+-|++++++. +..+.+.-|.........+++++-++.+
T Consensus 77 ~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v---~~PV~vKiR~g~~~~~~~~~~~~~a~~l 153 (350)
T 3b0p_A 77 RIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV---RVPVTVKMRLGLEGKETYRGLAQSVEAM 153 (350)
T ss_dssp HHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC---SSCEEEEEESCBTTCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh---CCceEEEEecCcCccccHHHHHHHHHHH
Confidence 99999999999997652 1111111112223 24444444445554443 3345554464333223466788889999
Q ss_pred HhcCCCEEEeccCC----------------CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 250 ADAGADVLFIDALA----------------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 250 ~eAGAD~Ifie~~~----------------s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
.++|+|.|.+++.. +.+.++++.+.++.+|+.+| ||-...-..+++-+ |+..|.++-.+
T Consensus 154 ~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVian----GgI~s~eda~~~l~-GaD~V~iGRa~ 228 (350)
T 3b0p_A 154 AEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTN----GGIRSLEEALFHLK-RVDGVMLGRAV 228 (350)
T ss_dssp HHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEE----SSCCSHHHHHHHHT-TSSEEEECHHH
T ss_pred HHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEE----CCcCCHHHHHHHHh-CCCEEEECHHH
Confidence 99999999998732 45678888888855888776 33211112344445 99999998876
Q ss_pred HH
Q 012815 314 IG 315 (456)
Q Consensus 314 l~ 315 (456)
+.
T Consensus 229 l~ 230 (350)
T 3b0p_A 229 YE 230 (350)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 86
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.93 E-value=0.026 Score=57.58 Aligned_cols=152 Identities=11% Similarity=0.070 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+.++..+++|++||.|--.- .| ||...-+| .+... +-..+-|++++++. |++ .|..|.-
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~av---g~~-~v~vrls 240 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGG-SIENRARFPLEVVDAVAEVF---GPE-RVGIRLT 240 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCc-chhhchHHHHHHHHHHHHHc---CCC-cEEEEec
Confidence 456677788889999999996431 12 23222223 22211 22333444444443 444 4555642
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCCEEEeccCC--------CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH
Q 012815 233 SR-------QALSLEESLRRSRAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (456)
Q Consensus 233 A~-------~~~~ldeAI~RakAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~ 297 (456)
.. ....++++++-++++.++|+|.|-+..-. ..+.++++.+.++ +|++.| ++-++ -..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~-iPvi~~----Ggi~~-~~a~ 314 (377)
T 2r14_A 241 PFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK-GGLIYC----GNYDA-GRAQ 314 (377)
T ss_dssp TTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC-SEEEEE----SSCCH-HHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC-CCEEEE----CCCCH-HHHH
Confidence 21 12357889999999999999999876521 2345677878876 787765 23221 1234
Q ss_pred HHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 298 ELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 298 eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
++-+-| +..|.++-.++.-- +....+++|.
T Consensus 315 ~~l~~g~aD~V~igR~~l~~P-----~l~~k~~~g~ 345 (377)
T 2r14_A 315 ARLDDNTADAVAFGRPFIANP-----DLPERFRLGA 345 (377)
T ss_dssp HHHHTTSCSEEEESHHHHHCT-----THHHHHHHTC
T ss_pred HHHHCCCceEEeecHHHHhCc-----hHHHHHHcCC
Confidence 444556 99999987666432 3445555554
No 87
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.83 E-value=0.044 Score=54.61 Aligned_cols=136 Identities=18% Similarity=0.251 Sum_probs=95.7
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
.+|+.+= .|+++++...+.++++.++|..+++| ++||. +.+..+++|++++++. |+++.|
T Consensus 133 ~vp~~~~--~g~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~---g~~~~l-- 192 (359)
T 1mdl_A 133 PVQAYDS--HSLDGVKLATERAVTAAELGFRAVKT-------RIGYP------ALDQDLAVVRSIRQAV---GDDFGI-- 192 (359)
T ss_dssp CEEEEEE--CCSCHHHHHHHHHHHHHHTTCSEEEE-------ECCCS------SHHHHHHHHHHHHHHH---CSSSEE--
T ss_pred Ceeeeee--cCCCCHHHHHHHHHHHHHcCCCEEEE-------ecCCC------CHHHHHHHHHHHHHHh---CCCCEE--
Confidence 4677553 45667777888889999999999998 24551 3466778888887764 567766
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---c-
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L- 302 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---l- 302 (456)
+.|+.....++++++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++.+ .
T Consensus 193 ~vDan~~~~~~~a~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPI~~d-----e~--~~~~~~~~~~i~~~ 262 (359)
T 1mdl_A 193 MVDYNQSLDVPAAIKRSQALQQEGVT--WIEEPTLQHDYEGHQRIQSKLN-VPVQMG-----EN--WLGPEEMFKALSIG 262 (359)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHHTCS--CEECCSCTTCHHHHHHHHHTCS-SCEEEC-----TT--CCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHhCCC--eEECCCChhhHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHcC
Confidence 45777777899999999999999887 45653 36778889988876 787643 22 235555443 3
Q ss_pred CCCEEeccchHHH
Q 012815 303 GFKLVAYPLSLIG 315 (456)
Q Consensus 303 Gv~~Vs~p~~ll~ 315 (456)
+++.|..-..-..
T Consensus 263 ~~d~v~ik~~~~G 275 (359)
T 1mdl_A 263 ACRLAMPDAMKIG 275 (359)
T ss_dssp CCSEECCBTTTTT
T ss_pred CCCEEeecchhhC
Confidence 4788877555433
No 88
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.82 E-value=0.081 Score=52.71 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=97.5
Q ss_pred ChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 98 DalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
|...|+.+.++|+.. .+|+.. + .+++. ......+..+. ...+.|+++-...||. +..+. +.+.++
T Consensus 75 ~~~~a~aa~~~G~~~-~~~~~~-~----~l~~~---~~~~~~~~~~~--~~~~~pv~~~i~~~~~-~~~~~---~~~~~~ 139 (349)
T 1p0k_A 75 NKSLARAASQAGIPL-AVGSQM-S----ALKDP---SERLSYEIVRK--ENPNGLIFANLGSEAT-AAQAK---EAVEMI 139 (349)
T ss_dssp HHHHHHHHHHHTCCE-ECCCCT-T----TTTCH---HHHHHHHHHHH--HCSSSCEEEEEETTCC-HHHHH---HHHHHT
T ss_pred HHHHHHHHHHcCCcE-Eeccch-h----cccCc---ccccceehhhh--hCCCceeEEeecCCCC-HHHHH---HHHHhc
Confidence 557788999999864 334322 1 12221 11111221121 2457999988877664 33333 345568
Q ss_pred CccEEEeCCCCCCCCccCCCCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEe-cchhhcccHHHHHHHHHHhHhcCCC
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVAR-TDSRQALSLEESLRRSRAFADAGAD 255 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR-TDA~~~~~ldeAI~RakAy~eAGAD 255 (456)
|+++|-|.-.. |.......+.+ +.. ..+.|++++++. +.++++... .+. . .+.++...++|||
T Consensus 140 gad~i~i~~~~-~~~~~~~~~~~~~~~---~~~~i~~vr~~~---~~Pv~vK~~~~~~----~----~~~a~~a~~~Gad 204 (349)
T 1p0k_A 140 GANALQIHLNV-IQEIVMPEGDRSFSG---ALKRIEQICSRV---SVPVIVKEVGFGM----S----KASAGKLYEAGAA 204 (349)
T ss_dssp TCSEEEEEECT-TTTC--------CTT---HHHHHHHHHHHC---SSCEEEEEESSCC----C----HHHHHHHHHHTCS
T ss_pred CCCeEEecccc-hhhhcCCCCCcchHH---HHHHHHHHHHHc---CCCEEEEecCCCC----C----HHHHHHHHHcCCC
Confidence 99997554321 11111111111 111 233444444332 345565542 111 1 2346778899999
Q ss_pred EEEecc-------------------------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEecc
Q 012815 256 VLFIDA-------------------------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYP 310 (456)
Q Consensus 256 ~Ifie~-------------------------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p 310 (456)
+|.+.. +++.+.++++.+.++.+|++.+ +|-...-+..+.-.+|.+.|..+
T Consensus 205 ~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~----GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 205 AVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIAS----GGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp EEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEEc
Confidence 998831 2344557777776644776543 34221123344445899999999
Q ss_pred chHHHHH
Q 012815 311 LSLIGVS 317 (456)
Q Consensus 311 ~~ll~aa 317 (456)
..++...
T Consensus 281 ~~~l~~~ 287 (349)
T 1p0k_A 281 GHFLKAL 287 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888763
No 89
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=96.81 E-value=0.018 Score=58.14 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=81.3
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++.|++||.+ ||+++.-...+.+|..+-+++ .+. .+.-|++=+-+ ...+++
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~--~~~----grvpViaGvg~---~st~ea 107 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVY--------CGSMGDWPLLTDEQRMEGVER--LVK----AGIPVIVGTGA---VNTASA 107 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE--------SSGGGTGGGSCHHHHHHHHHH--HHH----TTCCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccCcChhhCCHHHHHHHHHH--HhC----CCCcEEEecCC---CCHHHH
Confidence 5567889999999999999988 566666667888888777766 221 24455555533 357899
Q ss_pred HHHHHHhHhcCCCEEEeccC-----CCHHHHH----HHHH-hCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL-----ASKEEMK----AFCE-ISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-----~s~eei~----~i~~-~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ ++.+++. ++++ ..+ +|+++ |+ | .+ -.++++.+.+|
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~-lPiilYn~---P-~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPE-IPAVIYNS---P-YYGFATRADLFFAL 174 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTT-SCEEEEEB---G-GGTBCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCC-CcEEEEec---C-ccCCCcCHHHHHHH
Confidence 99999999999999987432 4555555 4555 444 67643 43 3 22 24777776666
No 90
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.80 E-value=0.13 Score=50.67 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=111.0
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCC---------CCC--------CCHHHHHHHHHHHHhccCCcEEEeCCCCC--
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPD---------TGF--------ISYGEMVDQGQLITQAVSIPVIGDGDNGY-- 161 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD---------~~~--------lt~~Eml~~~r~I~ra~~iPVIaD~DtGY-- 161 (456)
.++.+.+.|+-.+.+++..+.. ..|.|. .+. -.++++++.++.. ..+.|+++-.-...
T Consensus 70 ~~~~~a~~G~g~i~~~~~~~~~-~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~--~~~~~~~v~i~~~~~~ 146 (336)
T 1f76_A 70 CIDALGAMGFGSIEIGTVTPRP-QPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKA--HYDGVLGINIGKNKDT 146 (336)
T ss_dssp CHHHHHHTTCSEEEEEEECSSC-BCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHC--CCCSEEEEEECCCTTS
T ss_pred HHHHHHHcCccEEEeCCCCCCC-CCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhc--ccCCcEEEEecCCCCC
Confidence 4677888999988776543221 112211 110 1245555554432 12467777651110
Q ss_pred ---CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCc-cccCHHHHHHHHHHHHHHhHhh----CCCeEEEEecch
Q 012815 162 ---GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-KVVSREEAVMRIKAAVDARKES----GSDIVIVARTDS 233 (456)
Q Consensus 162 ---G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk-~lvp~ee~v~kI~AA~~Ar~~~----G~dfvIiARTDA 233 (456)
.......+.++++.+ |+++|-|-=. |.++.|. .+...+...+-|++++++.... |.++-|+.|.-.
T Consensus 147 ~i~~~~~~~~~aa~~~~~-g~d~iein~~-----sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~ 220 (336)
T 1f76_A 147 PVEQGKDDYLICMEKIYA-YAGYIAINIS-----SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAP 220 (336)
T ss_dssp CGGGTHHHHHHHHHHHGG-GCSEEEEECC-----CSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCS
T ss_pred cccccHHHHHHHHHHHhc-cCCEEEEEcc-----CCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecC
Confidence 014566667776655 9999866432 3333322 2334444445555555544221 335555556432
Q ss_pred hhcccHHHHHHHHHHhHhcCCCEEEeccCC--------------------------CHHHHHHHHHhCC-CCceeeeeec
Q 012815 234 RQALSLEESLRRSRAFADAGADVLFIDALA--------------------------SKEEMKAFCEISP-LVPKMANMLE 286 (456)
Q Consensus 234 ~~~~~ldeAI~RakAy~eAGAD~Ifie~~~--------------------------s~eei~~i~~~v~-~vP~~~N~~~ 286 (456)
. ...++..+-++...++|+|.|.+.+.. +.+.++++.+.++ .+|+..+
T Consensus 221 ~--~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~--- 295 (336)
T 1f76_A 221 D--LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV--- 295 (336)
T ss_dssp C--CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE---
T ss_pred C--CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE---
Confidence 1 345677888999999999999886320 1256667777774 3787654
Q ss_pred cCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 287 GGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 287 ~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
||-...-+..+.-++|...|..+..++.
T Consensus 296 -GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 296 -GGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp -SSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred -CCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 3422222345555689999998877665
No 91
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.80 E-value=0.069 Score=52.99 Aligned_cols=182 Identities=14% Similarity=0.087 Sum_probs=111.3
Q ss_pred HHHHHHhCCCcee---ecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILELPGVHQ---GPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~~~~lv---~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
+|.+++.-.-|++ |.+.-+.--+..+.++|.-.+..++ .++.+++.+.++.+.+.++.|+.+.
T Consensus 4 ~~~~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~--------------~~~~~~~~~~i~~i~~~~~~p~gvn 69 (332)
T 2z6i_A 4 RITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGG--------------NAPKEVVKANIDKIKSLTDKPFGVN 69 (332)
T ss_dssp HHHHHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECT--------------TCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred hhhHHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4666665444443 3366667777777788752222111 2466777777777776666777654
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
.=. .++ ...+.++.+.++|+++|.+-.. + | .+.+++++. .++.|+.+.+.
T Consensus 70 l~~--~~~-~~~~~~~~a~~~g~d~V~~~~g-------~-------p-~~~i~~l~~---------~g~~v~~~v~~--- 119 (332)
T 2z6i_A 70 IML--LSP-FVEDIVDLVIEEGVKVVTTGAG-------N-------P-SKYMERFHE---------AGIIVIPVVPS--- 119 (332)
T ss_dssp ECT--TST-THHHHHHHHHHTTCSEEEECSS-------C-------G-GGTHHHHHH---------TTCEEEEEESS---
T ss_pred ecC--CCC-CHHHHHHHHHHCCCCEEEECCC-------C-------h-HHHHHHHHH---------cCCeEEEEeCC---
Confidence 311 122 2455677888899999998443 2 1 233444432 14666666533
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC---------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~---------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
++.++...++|+|.|.+.+. .+.+.++++.+.++ +|++++ +|-...-...++-++|...|
T Consensus 120 ------~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~-iPViaa----GGI~~~~~~~~al~~GAdgV 188 (332)
T 2z6i_A 120 ------VALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAIS-IPVIAA----GGIADGEGAAAGFMLGAEAV 188 (332)
T ss_dssp ------HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred ------HHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 34466788899999999642 33567788887776 776543 34321123455566899999
Q ss_pred eccchHHHH
Q 012815 308 AYPLSLIGV 316 (456)
Q Consensus 308 s~p~~ll~a 316 (456)
..+..++..
T Consensus 189 ~vGs~~l~~ 197 (332)
T 2z6i_A 189 QVGTRFVVA 197 (332)
T ss_dssp EECHHHHTB
T ss_pred EecHHHhcC
Confidence 999887764
No 92
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.76 E-value=0.017 Score=56.76 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=101.2
Q ss_pred ccccCCCCCccceeecceeeeecccchh--hhhcc-cCCCCcccccccccCCCccccccccHHHHHHHHHhCCCceeec-
Q 012815 19 LFHSNSRPSSFLGINNNTISFNKTNTNT--LLLNT-ATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGP- 94 (456)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~pr~~~~~R~y~~~s~~~~~a~~~a~~Lr~ll~~~~~lv~p- 94 (456)
+|-..-+++.+-+++|-+=-.+-+.+.. .+... ....+|-.+ .+++......+-....-+..++ +.+.+..++|
T Consensus 64 ~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKl-Ev~~d~~~llpD~~~tv~aa~~-L~~~Gf~Vlpy 141 (265)
T 1wv2_A 64 NLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKL-EVLADQKTLFPNVVETLKAAEQ-LVKDGFDVMVY 141 (265)
T ss_dssp ------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEE-CCBSCTTTCCBCHHHHHHHHHH-HHTTTCEEEEE
T ss_pred hHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEE-EeecCccccCcCHHHHHHHHHH-HHHCCCEEEEE
Confidence 3444445667888898776555444433 44444 667778877 3443322222211122234444 4455688887
Q ss_pred ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012815 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (456)
Q Consensus 95 gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l 174 (456)
++=|...|+.++++|.++|.--|.-+- +-.|+ .+ .+.++.|.+..++|||+ |.|.+.+.+++ ..
T Consensus 142 ~~dd~~~akrl~~~G~~aVmPlg~pIG-sG~Gi-----~~----~~lI~~I~e~~~vPVI~--eGGI~TPsDAa----~A 205 (265)
T 1wv2_A 142 TSDDPIIARQLAEIGCIAVMPLAGLIG-SGLGI-----CN----PYNLRIILEEAKVPVLV--DAGVGTASDAA----IA 205 (265)
T ss_dssp ECSCHHHHHHHHHSCCSEEEECSSSTT-CCCCC-----SC----HHHHHHHHHHCSSCBEE--ESCCCSHHHHH----HH
T ss_pred eCCCHHHHHHHHHhCCCEEEeCCccCC-CCCCc-----CC----HHHHHHHHhcCCCCEEE--eCCCCCHHHHH----HH
Confidence 899999999999999999976342221 11222 23 23447777778999999 56788887766 45
Q ss_pred HHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
.+.||+||.+--.. |.. -++..+++.++.|++|.+
T Consensus 206 meLGAdgVlVgSAI------~~a----~dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 206 MELGCEAVLMNTAI------AHA----KDPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp HHHTCSEEEESHHH------HTS----SSHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEChHH------hCC----CCHHHHHHHHHHHHHHHH
Confidence 56799999984432 111 123455566655555543
No 93
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.73 E-value=0.2 Score=49.56 Aligned_cols=209 Identities=14% Similarity=0.140 Sum_probs=141.6
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcE
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPV 153 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPV 153 (456)
.+-|+...+.+--+...|+++.-+++.+ |+.+.+.|.-.+-+.. ...| ++.+...++..++..++||
T Consensus 7 ~~ll~~A~~~~yAv~AfNv~n~e~~~avl~AAe~~~sPvIlq~s~~~~-~y~g--------~~~~~~~v~~~a~~~~VPV 77 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTF-KHIA--------LEEIYALCSAYSTTYNMPL 77 (286)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTCCCEEEECTTHH-HHSC--------HHHHHHHHHHHHHHTTSCB
T ss_pred HHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-hhcC--------HHHHHHHHHHHHHhCCCcE
Confidence 3456665666667889999999888765 5568887765543322 1223 6778888899999899999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE------
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI------ 227 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI------ 227 (456)
..=.|.|. + .+.+++.+++|...|.|... | .|.||=+++-+..++-++..| .-|
T Consensus 78 alHlDHg~-~----~e~i~~ai~~GFtSVMiDgS-------~------lp~eeNi~~Tk~vv~~ah~~g--vsVEaElG~ 137 (286)
T 1gvf_A 78 ALHLDHHE-S----LDDIRRKVHAGVRSAMIDGS-------H------FPFAENVKLVKSVVDFCHSQD--CSVEAELGR 137 (286)
T ss_dssp EEEEEEEC-C----HHHHHHHHHTTCCEEEECCT-------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred EEEcCCCC-C----HHHHHHHHHcCCCeEEECCC-------C------CCHHHHHHHHHHHHHHHHHcC--CEEEEEEee
Confidence 99999984 3 46667778899999999443 3 367888888888887665432 111
Q ss_pred EEecc-hh-------hcccHHHHHHHHHHhH-hcCCCEEEec-----cC------CCHHHHHHHHHhCCCCceeeeeecc
Q 012815 228 VARTD-SR-------QALSLEESLRRSRAFA-DAGADVLFID-----AL------ASKEEMKAFCEISPLVPKMANMLEG 287 (456)
Q Consensus 228 iARTD-A~-------~~~~ldeAI~RakAy~-eAGAD~Ifie-----~~------~s~eei~~i~~~v~~vP~~~N~~~~ 287 (456)
++-.+ .. .-..-+ .|+.|. +.|+|++=+- |. -+.+.++++.+.++ +|+. +++
T Consensus 138 vgg~ed~~~~~~~~~~~T~Pe----ea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~-vpLV---lHG 209 (286)
T 1gvf_A 138 LGGVEDDMSVDAESAFLTDPQ----EAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD-VPLV---LHG 209 (286)
T ss_dssp CC-----------CCSSCCHH----HHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC-SCEE---ECC
T ss_pred ccCcccCcccccccccCCCHH----HHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC-CCEE---EEC
Confidence 11111 10 002233 355555 6999988652 32 25788999999876 6753 454
Q ss_pred CCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012815 288 GGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (456)
Q Consensus 288 ~g~tp~lt~~eL~---elGv~~Vs~p~~ll~aa~~A~~~~l~ 326 (456)
+. .++.++++ ++|+.-|=+..-+..+.+.++++.+.
T Consensus 210 gS---G~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~ 248 (286)
T 1gvf_A 210 AS---DVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFA 248 (286)
T ss_dssp CT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 32 35666555 68999999999999999999988863
No 94
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.73 E-value=0.058 Score=54.76 Aligned_cols=165 Identities=10% Similarity=-0.008 Sum_probs=105.0
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEeCCCCCC-CHHHHHHHHHHHH---HhCccEEEeCCCCCCCCccCCC-Cccc-cCHHH
Q 012815 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYI---KAGFAGIILEDQVSPKGCGHTR-GRKV-VSREE 206 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG-~~~nv~rtVk~l~---~AGaaGI~IEDq~~pK~CGH~~-gk~l-vp~ee 206 (456)
..++.++++.+...+..+.||++-+ +| +++...+.++++. ++|+++|.|.=. |-+.. +..+ .+++.
T Consensus 109 ~G~~~~~~~l~~~~~~~~~pvivsI---~G~~~~d~~~~a~~l~~~~~~g~d~ielNis-----CPn~~gg~~l~~~~e~ 180 (354)
T 4ef8_A 109 NGFDFYLAYAAEQHDYGKKPLFLSM---SGLSMRENVEMCKRLAAVATEKGVILELNLS-----CPNVPGKPQVAYDFDA 180 (354)
T ss_dssp CCHHHHHHHHHHTCCTTTCCEEEEE---CCSSHHHHHHHHHHHHHHHHHHCCEEEEECS-----SCCSTTSCCGGGSHHH
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEe---ccCCHHHHHHHHHHHhhhhhcCCCEEEEeCC-----CCCCCCchhhccCHHH
Confidence 4578888877766545579999876 34 5677777777777 689999988655 33332 2334 35666
Q ss_pred HHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC-CCEEEe----------c--cC-----------
Q 012815 207 AVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG-ADVLFI----------D--AL----------- 262 (456)
Q Consensus 207 ~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAG-AD~Ifi----------e--~~----------- 262 (456)
..+-+++++++. ..++.|--|.+- +.++..+-++.+.++| ||.|.+ + ..
T Consensus 181 ~~~il~av~~~~---~~PV~vKi~p~~----d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~g 253 (354)
T 4ef8_A 181 MRQCLTAVSEVY---PHSFGVKMPPYF----DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFG 253 (354)
T ss_dssp HHHHHHHHHHHC---CSCEEEEECCCC----SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEE
T ss_pred HHHHHHHHHHhh---CCCeEEEecCCC----CHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccC
Confidence 655555555553 356777777653 2455556677788998 999864 1 10
Q ss_pred ---------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 263 ---------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 263 ---------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.+.+.++++.+..+.+|+..| +|-...-+..+.-++|...|-.+..++..
T Consensus 254 GlSG~~i~p~a~~~i~~v~~~~~~ipII~~----GGI~s~~da~~~l~aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 254 GLGGRYVLPTALANINAFYRRCPGKLIFGC----GGVYTGEDAFLHVLAGASMVQVGTALQEE 312 (354)
T ss_dssp EEEGGGGHHHHHHHHHHHHHHCTTSEEEEE----SCCCSHHHHHHHHHHTEEEEEECHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHhCCCCCEEEE----CCcCCHHHHHHHHHcCCCEEEEhHHHHHh
Confidence 124567777777655787655 34221122344556899999988877654
No 95
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=96.71 E-value=0.0086 Score=57.87 Aligned_cols=187 Identities=14% Similarity=0.160 Sum_probs=106.9
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaa 180 (456)
.+.+.++|.|++-+++ | ..++.+.+++.+++|.+ +++||+. .+|- ++. ++|++
T Consensus 26 ~~~l~~~GaD~ielG~---S---------~Gvt~~~~~~~v~~ir~-~~~Pivl---m~y~~n~i----------~~G~d 79 (240)
T 1viz_A 26 LEILCESGTDAVIIGG---S---------DGVTEDNVLRMMSKVRR-FLVPCVL---EVSAIEAI----------VPGFD 79 (240)
T ss_dssp HHHHHTSCCSEEEECC----------------CHHHHHHHHHHHTT-SSSCEEE---ECSCGGGC----------CSCCS
T ss_pred HHHHHHcCCCEEEECC---C---------CCCCHHHHHHHHHHhhC-cCCCEEE---ecCccccc----------cCCCC
Confidence 3566788999999997 1 34788999999999988 8999998 4555 322 78999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC-CCeE-----EEEecch--hh-cccHHHHHHHHHHhHh
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIV-----IVARTDS--RQ-ALSLEESLRRSRAFAD 251 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G-~dfv-----IiARTDA--~~-~~~ldeAI~RakAy~e 251 (456)
|+.+=|=.. -. ...+. ... -+.++.+....+. .+.+ +++=+.. +. ....+.--+|+++|++
T Consensus 80 g~iiPdLp~-ee-----~~~~~-~g~---~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~ 149 (240)
T 1viz_A 80 LYFIPSVLN-SK-----NADWI-VGM---HQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYAR 149 (240)
T ss_dssp EEEEEEETT-BS-----SGGGT-THH---HHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHH
T ss_pred EEEEcccCc-cc-----Chhhh-cch---hHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHH
Confidence 999977421 00 00110 000 0122222110000 2222 3332211 10 0000011358999999
Q ss_pred cCC----CEEEecc---CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHH
Q 012815 252 AGA----DVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDA 324 (456)
Q Consensus 252 AGA----D~Ifie~---~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~ 324 (456)
+|. -.|++++ ....+.++++.+....+|+.+ .+ |-...=..+++.+ |+..|+.|+.+...--..+++
T Consensus 150 ~g~~~~~~~VYl~s~G~~~~~~~i~~i~~~~~~~Pv~v---Gg-GI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~~~- 223 (240)
T 1viz_A 150 VSELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFY---GG-GIKDAETAKQYAE-HADVIVVGNAVYEDFDRALKT- 223 (240)
T ss_dssp HHHHTTCSEEEEECTTSCCCHHHHHHHHHTCSSSEEEE---ES-SCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHHTH-
T ss_pred hCcccCCCEEEEeCCCccChHHHHHHHHHhcCCCCEEE---Ee-ccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHHHH-
Confidence 986 7888887 345778899988772366542 33 3211122456667 999999999887754334445
Q ss_pred HHHHHc
Q 012815 325 LTAIKG 330 (456)
Q Consensus 325 l~~i~~ 330 (456)
.+++++
T Consensus 224 v~~~~~ 229 (240)
T 1viz_A 224 VAAVKG 229 (240)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 555654
No 96
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.69 E-value=0.051 Score=49.85 Aligned_cols=155 Identities=16% Similarity=0.098 Sum_probs=91.7
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
++.+++.|++.+-+.-. |. +.+..++.+++.+++|+++-..+-+ +. ..++.+.++||++
T Consensus 25 ~~~~~~~G~~~i~l~~~----------~~------~~~~~i~~i~~~~~~~l~vg~g~~~-~~----~~i~~a~~~Gad~ 83 (212)
T 2v82_A 25 VGAVIDAGFDAVEIPLN----------SP------QWEQSIPAIVDAYGDKALIGAGTVL-KP----EQVDALARMGCQL 83 (212)
T ss_dssp HHHHHHHTCCEEEEETT----------ST------THHHHHHHHHHHHTTTSEEEEECCC-SH----HHHHHHHHTTCCE
T ss_pred HHHHHHCCCCEEEEeCC----------Ch------hHHHHHHHHHHhCCCCeEEEecccc-CH----HHHHHHHHcCCCE
Confidence 45566789998876411 10 1135566777777788777221111 22 3567888999999
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA 261 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~ 261 (456)
|++... + .+.+ ++++..|.++ +.+ ....+|+ ....++|+|.|.+..
T Consensus 84 V~~~~~---------------~-~~~~-------~~~~~~g~~~-~~g------~~t~~e~----~~a~~~G~d~v~v~~ 129 (212)
T 2v82_A 84 IVTPNI---------------H-SEVI-------RRAVGYGMTV-CPG------CATATEA----FTALEAGAQALKIFP 129 (212)
T ss_dssp EECSSC---------------C-HHHH-------HHHHHTTCEE-ECE------ECSHHHH----HHHHHTTCSEEEETT
T ss_pred EEeCCC---------------C-HHHH-------HHHHHcCCCE-Eee------cCCHHHH----HHHHHCCCCEEEEec
Confidence 985331 1 1222 1223334333 333 1233443 344679999998632
Q ss_pred --CCCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 262 --LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 262 --~~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
....+.++++.+.++ .+|+. ..||-+ .-+..++.+.|+..|..+..++..
T Consensus 130 t~~~g~~~~~~l~~~~~~~ipvi----a~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 130 SSAFGPQYIKALKAVLPSDIAVF----AVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHCHHHHHHHHTTSCTTCEEE----EESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred CCCCCHHHHHHHHHhccCCCeEE----EeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 124577788877664 34443 234544 357899999999999999877653
No 97
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=96.65 E-value=0.017 Score=57.32 Aligned_cols=124 Identities=18% Similarity=0.224 Sum_probs=88.7
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|+++++...+.++++.+.|..+++| ++|| +.++-+++|++++++ |+++.| |-|+.....+
T Consensus 136 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~d~~~v~avr~~----g~~~~l--~vDan~~~~~ 195 (345)
T 2zad_A 136 GIDTVENRVKEAKKIFEEGFRVIKI-------KVGE-------NLKEDIEAVEEIAKV----TRGAKY--IVDANMGYTQ 195 (345)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEE-------ECCS-------CHHHHHHHHHHHHHH----STTCEE--EEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCcCEEEE-------eecC-------CHHHHHHHHHHHHhh----CCCCeE--EEECCCCCCH
Confidence 4567878888889999999999998 2455 356678888888776 456666 5688877789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccc
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPL 311 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~ 311 (456)
+++++-++++.+.|.+..|+|-+ .+.+.++++.+.++ +|+... +. ..+.+++. +.| ++.|..=+
T Consensus 196 ~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~-ipia~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 266 (345)
T 2zad_A 196 KEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSP-FPVAAD-----ES--ARTKFDVMRLVKEEAVDYVNIKL 266 (345)
T ss_dssp HHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhCC-CCEEEe-----CC--cCCHHHHHHHHHhCCCCEEEEec
Confidence 99999999999998774467764 35678888988876 776643 22 23554444 446 66666533
No 98
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.64 E-value=0.058 Score=58.10 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=118.9
Q ss_pred hCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc---CCcEEEeCCCC--------------------CCCH
Q 012815 108 SGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV---SIPVIGDGDNG--------------------YGNA 164 (456)
Q Consensus 108 aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~---~iPVIaD~DtG--------------------YG~~ 164 (456)
-|+-.|.+.+..++....++|..-.+.-++.+..-+.+++++ +.++++=+=.+ ...+
T Consensus 49 gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p 128 (671)
T 1ps9_A 49 HGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVP 128 (671)
T ss_dssp TTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCC
T ss_pred CCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCC
Confidence 378777776655543334566543333345555555554332 34554433221 1122
Q ss_pred ------------HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCccCCCCccccC-HHHHHHHHHHHHHHhHh
Q 012815 165 ------------MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVS-REEAVMRIKAAVDARKE 220 (456)
Q Consensus 165 ------------~nv~rtVk~l~~AGaaGI~IEDq~-----------~pK~CGH~~gk~lvp-~ee~v~kI~AA~~Ar~~ 220 (456)
+...+.+++.+++|++||.|-..- ..||...-+|. +.. .+-..+-+++++++
T Consensus 129 ~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs-~~~r~r~~~eiv~avr~~--- 204 (671)
T 1ps9_A 129 HELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD-YRNRMRFAVEVVRAVRER--- 204 (671)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHH---
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCc-HHHHHHHHHHHHHHHHHH---
Confidence 355677788889999999986431 11232222231 211 22234444444444
Q ss_pred hCCCeEEEEecchh----hcccHHHHHHHHHHhHhcCCCEEEec-----cC-C----------CHHHHHHHHHhCCCCce
Q 012815 221 SGSDIVIVARTDSR----QALSLEESLRRSRAFADAGADVLFID-----AL-A----------SKEEMKAFCEISPLVPK 280 (456)
Q Consensus 221 ~G~dfvIiARTDA~----~~~~ldeAI~RakAy~eAGAD~Ifie-----~~-~----------s~eei~~i~~~v~~vP~ 280 (456)
.|+|+.|..|.... ....++++++-++++.++|+|.|-+. .. + ..+.++++.+.++ +|+
T Consensus 205 vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-iPv 283 (671)
T 1ps9_A 205 VGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS-LPL 283 (671)
T ss_dssp HCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS-SCE
T ss_pred cCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC-ceE
Confidence 47789888886542 23467899999999999999999663 11 1 1355666766665 787
Q ss_pred eeeeeccCCCCCCCCHHHHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 281 MANMLEGGGKTPILNPLELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 281 ~~N~~~~~g~tp~lt~~eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
+.| ++-+..-..+++-+.| +..|.++-.++.-- +....+++|.
T Consensus 284 i~~----Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P-----~l~~k~~~g~ 327 (671)
T 1ps9_A 284 VTT----NRINDPQVADDILSRGDADMVSMARPFLADA-----ELLSKAQSGR 327 (671)
T ss_dssp EEC----SSCCSHHHHHHHHHTTSCSEEEESTHHHHCT-----THHHHHHTTC
T ss_pred EEe----CCCCCHHHHHHHHHcCCCCEEEeCHHHHhCc-----HHHHHHHcCC
Confidence 654 2311111235555566 99999988766542 3455566554
No 99
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.62 E-value=0.042 Score=55.64 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+.+++.+++|++||.|--.- .| ||...-+|. +... +-..+-|++++++. |++ .|..|.-
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGs-lenr~r~~~eiv~avr~~v---g~~-pv~vris 235 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGS-LENRLRFLDEVVAALVDAI---GAE-RVGVRLA 235 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSS-HHHHTHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcc-hhhhHHHHHHHHHHHHHHc---CCC-cEEEEEc
Confidence 455677778889999999995421 11 232222221 2111 12333344444443 444 3444433
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCCEEEeccC-----C--CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH
Q 012815 233 SR-------QALSLEESLRRSRAFADAGADVLFIDAL-----A--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (456)
Q Consensus 233 A~-------~~~~ldeAI~RakAy~eAGAD~Ifie~~-----~--s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e 298 (456)
.. ....++++++-++++.++|+|.|-+... + ..+.++++.+.++ +|++.| ++-++ -..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~-iPvi~~----Ggi~~-~~a~~ 309 (365)
T 2gou_A 236 PLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQ-GVLIYA----GRYNA-EKAEQ 309 (365)
T ss_dssp SSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC-SEEEEE----SSCCH-HHHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCC-CcEEEe----CCCCH-HHHHH
Confidence 21 1235788999999999999999988653 1 2456778888886 787665 23221 12345
Q ss_pred HHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 299 LEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 299 L~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
+-+.| +..|.++-.++.- -+....+++|.
T Consensus 310 ~l~~g~aD~V~igR~~i~~-----P~l~~~~~~g~ 339 (365)
T 2gou_A 310 AINDGLADMIGFGRPFIAN-----PDLPERLRHGY 339 (365)
T ss_dssp HHHTTSCSEEECCHHHHHC-----TTHHHHHHHTC
T ss_pred HHHCCCcceehhcHHHHhC-----chHHHHHHcCC
Confidence 55566 9999988766653 24455566554
No 100
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.59 E-value=0.03 Score=56.28 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhCccEEEeCCCCC--------C---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 167 VKRTVKGYIKAGFAGIILEDQVS--------P---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~--------p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
..+.+++.+++|++||.|--.-. | +|+..-+| .+-.. +-..+-|++++++ .|+|+.|.-|....
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~a---vG~d~pV~vRls~~ 229 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVREV---VPRELPLFVRVSAT 229 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHH---SCTTSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHHH---hcCCceEEEEeccc
Confidence 34556677789999999965421 2 33322222 12111 1223344444433 46788788887653
Q ss_pred ----hcccHHHHHHHHHHhHhcCCCEEEecc--C-----------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH
Q 012815 235 ----QALSLEESLRRSRAFADAGADVLFIDA--L-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (456)
Q Consensus 235 ----~~~~ldeAI~RakAy~eAGAD~Ifie~--~-----------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~ 297 (456)
....++++++-++.+.++|+|.|-+.. . ...+.++++.+.++ +|++.| ++-+..-..+
T Consensus 230 ~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----Ggi~t~e~a~ 304 (349)
T 3hgj_A 230 DWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG-LRTGAV----GLITTPEQAE 304 (349)
T ss_dssp CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC-CEEEEC----SSCCCHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC-ceEEEE----CCCCCHHHHH
Confidence 134578999999999999999987752 1 13456777777775 677654 2211111235
Q ss_pred HHHhcC-CCEEeccchHHH
Q 012815 298 ELEELG-FKLVAYPLSLIG 315 (456)
Q Consensus 298 eL~elG-v~~Vs~p~~ll~ 315 (456)
++-+.| +..|.++-.++.
T Consensus 305 ~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 305 TLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHTTSCSEEEESTHHHH
T ss_pred HHHHCCCceEEEecHHHHh
Confidence 555667 899999877654
No 101
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=96.56 E-value=0.045 Score=54.73 Aligned_cols=127 Identities=21% Similarity=0.316 Sum_probs=90.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.+++....+.++++.+.|..+++| ++|| +.++.+++|++++++. |+++.| |-|+......
T Consensus 138 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~~ 198 (369)
T 2p8b_A 138 SIADPENMAEEAASMIQKGYQSFKM-------KVGT-------NVKEDVKRIEAVRERV---GNDIAI--RVDVNQGWKN 198 (369)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHHHHH---CTTSEE--EEECTTTTBS
T ss_pred cCCChHHHHHHHHHHHHcCcCEEEE-------EeCC-------CHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCCH
Confidence 4457778888899999999999998 2454 3567788888887774 667776 6788777778
Q ss_pred HHHH-HHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hc-CCCEEeccc
Q 012815 240 EESL-RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL-GFKLVAYPL 311 (456)
Q Consensus 240 deAI-~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---el-Gv~~Vs~p~ 311 (456)
++++ +.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +. .++.|..-.
T Consensus 199 ~~a~~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 199 SANTLTALRSLGHLNID--WIEQPVIADDIDAMAHIRSKTD-LPLMID-----EG--LKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp HHHHHHHHHTSTTSCCS--CEECCBCTTCHHHHHHHHHTCC-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHHhCCCc--EEECCCCcccHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHhCCCCEEEeec
Confidence 9999 999999999877 55643 35678889988876 787653 21 23444433 34 477777755
Q ss_pred hHHH
Q 012815 312 SLIG 315 (456)
Q Consensus 312 ~ll~ 315 (456)
.-..
T Consensus 269 ~~~G 272 (369)
T 2p8b_A 269 MKCG 272 (369)
T ss_dssp HHHT
T ss_pred chhC
Confidence 5443
No 102
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.56 E-value=0.051 Score=54.26 Aligned_cols=159 Identities=14% Similarity=0.108 Sum_probs=98.2
Q ss_pred HHHHhccCCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 143 QLITQAVSIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 143 r~I~ra~~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
+.+.+..+.+|++|.=.+ + +..+.+.++.+.++||+.+.+--.. | .+-+++++++.++.
T Consensus 69 ~~Lk~~~g~~IflDlKl~--DIpnTv~~av~~~a~lGaD~vTVHa~~---------G---------~~~m~aa~e~a~~~ 128 (303)
T 3ru6_A 69 EELKKVDDFKIFLDLKFH--DIPNTMADACEEVSKLGVDMINIHASA---------G---------KIAIQEVMTRLSKF 128 (303)
T ss_dssp HHHHHHCCCEEEEEEEEC--SCHHHHHHHHHHHHTTTCSEEEEEGGG---------C---------HHHHHHHHHHHTTS
T ss_pred HHHHHhhCCCEEEEeeec--cCchhHHHHHHHHHhcCCCEEEEeccC---------C---------HHHHHHHHHHHHhc
Confidence 444444478999998865 5 3456777888889999999883321 1 22455666665543
Q ss_pred CCCeEEEE---ec--chh-----hcccH-HHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCC
Q 012815 222 GSDIVIVA---RT--DSR-----QALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGK 290 (456)
Q Consensus 222 G~dfvIiA---RT--DA~-----~~~~l-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~ 290 (456)
+....++| -| +.. ...++ +.++++|+...++|.|.++... .|++.+.+..+. .++-++ ||-
T Consensus 129 ~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~----~E~~~IR~~~~~--~fl~VT--PGI 200 (303)
T 3ru6_A 129 SKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSV----FESKKIKEHTSS--NFLTLT--PGI 200 (303)
T ss_dssp SSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCT----TTHHHHHHHSCT--TSEEEE--CCC
T ss_pred CCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECH----HHHHHHHHhCCC--ccEEEC--CCc
Confidence 33333443 33 211 11223 4567889999999999987733 245666666542 222233 333
Q ss_pred CCC----------CCHHHHHhcCCCEEeccchHHHHH--HHHHHHHHHHHH
Q 012815 291 TPI----------LNPLELEELGFKLVAYPLSLIGVS--VRAMQDALTAIK 329 (456)
Q Consensus 291 tp~----------lt~~eL~elGv~~Vs~p~~ll~aa--~~A~~~~l~~i~ 329 (456)
.|. .|+.+..+.|.+.++.|...+.+. ..+++...++|.
T Consensus 201 r~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~ 251 (303)
T 3ru6_A 201 RPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH 251 (303)
T ss_dssp CTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC
T ss_pred CcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 332 478899999999999999888753 445555555554
No 103
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=96.55 E-value=0.041 Score=55.38 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++...+.++++.++|..+|+| ++|| +.+..+++|++++++. |+|+.| +.|+.....+
T Consensus 142 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~---g~d~~l--~vDan~~~~~ 202 (379)
T 2rdx_A 142 PQRSEAETRAELARHRAAGYRQFQI-------KVGA-------DWQSDIDRIRACLPLL---EPGEKA--MADANQGWRV 202 (379)
T ss_dssp CCSCSHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHGGGS---CTTCEE--EEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEE-------eccC-------CHHHHHHHHHHHHHhc---CCCCEE--EEECCCCCCH
Confidence 3356778888899999999999998 3455 4566778888776654 667776 4577777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---c-CCCEEeccchH
Q 012815 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L-GFKLVAYPLSL 313 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---l-Gv~~Vs~p~~l 313 (456)
+++++-++++.++|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.+++.+ . .++.|..-...
T Consensus 203 ~~a~~~~~~l~~~~i---~iE~P~~~~~~~~~l~~~~~-iPI~~d-----e~--i~~~~~~~~~i~~~~~d~v~ik~~~ 270 (379)
T 2rdx_A 203 DNAIRLARATRDLDY---ILEQPCRSYEECQQVRRVAD-QPMKLD-----EC--VTGLHMAQRIVADRGAEICCLKISN 270 (379)
T ss_dssp HHHHHHHHHTTTSCC---EEECCSSSHHHHHHHHTTCC-SCEEEC-----TT--CCSHHHHHHHHHHTCCSEEEEETTT
T ss_pred HHHHHHHHHHHhCCe---EEeCCcCCHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEeccc
Confidence 999999999999886 66653 47788899988876 787643 22 235555444 3 47888775543
No 104
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=96.52 E-value=0.12 Score=52.18 Aligned_cols=89 Identities=18% Similarity=0.085 Sum_probs=54.3
Q ss_pred HHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEec-c-hHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTS-G-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vS-G-~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~ 157 (456)
.|-++++ ++ +++ .|-.+-.|+++|++|+.+|..= - -..--...|. ..+.-. +.++.|.+++++||++=.
T Consensus 11 ~~~~~~k-gG-vI~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~---arm~~p---~~i~~I~~av~iPV~~K~ 81 (330)
T 2yzr_A 11 GFAKMVK-HG-VVM-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGV---ARMSDP---ALIEEIMDAVSIPVMAKC 81 (330)
T ss_dssp HHHHTTT-TS-EEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCC---CCCCCH---HHHHHHHHHCSSCEEEEE
T ss_pred HHHHHcc-CC-cee-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcch---hhcCCH---HHHHHHHHhcCCCeEEEE
Confidence 4555544 33 444 7777889999999999988321 0 0111001121 122222 345666778999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEE
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGII 183 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~ 183 (456)
=-|| ..-++.++.+||+.|-
T Consensus 82 rig~------~~e~qilea~GaD~Id 101 (330)
T 2yzr_A 82 RIGH------TTEALVLEAIGVDMID 101 (330)
T ss_dssp ETTC------HHHHHHHHHTTCSEEE
T ss_pred eecc------hHHHHHHHHcCCCEEe
Confidence 8888 2334566779999995
No 105
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=96.52 E-value=0.26 Score=51.31 Aligned_cols=226 Identities=16% Similarity=0.113 Sum_probs=132.3
Q ss_pred HhCCC--ceeecccCChHHHHHHHH----hCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCc---EEE
Q 012815 85 LELPG--VHQGPACFDALSAKLVEK----SGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP---VIG 155 (456)
Q Consensus 85 l~~~~--~lv~pgayDalSArl~e~----aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iP---VIa 155 (456)
.+.+. .+...|+++....+.+-+ .+.+.|.-.+-....-.-||- ..+++++...++.+++..++| |+.
T Consensus 8 ~~~~~a~av~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~---g~~~~~~~~~v~~~A~~~~vP~~~VaL 84 (420)
T 2fiq_A 8 HKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYT---GMTPADFREFVFAIADKVGFARERIIL 84 (420)
T ss_dssp HHTTCCBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTT---TBCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred HHcCCceEEEEeccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCC---CCCHHHHHHHHHHHHHHcCcCcceEEE
Confidence 44555 456778899888877644 477777755322110011331 235899999999999988999 999
Q ss_pred eCCCCCCC------H----HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHH--HHHHHHHHHhHhh--
Q 012815 156 DGDNGYGN------A----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAV--MRIKAAVDARKES-- 221 (456)
Q Consensus 156 D~DtGYG~------~----~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v--~kI~AA~~Ar~~~-- 221 (456)
=.|+|.-. + ..+.+.++.++++|..-|+|.... -|- +.+ +|.++-+ .|-+.+++.++..
T Consensus 85 HlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~---~~~---~~~-~pl~eNi~~~rt~elv~~Ah~~~~ 157 (420)
T 2fiq_A 85 GGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASM---SCA---GDP-IPLAPETVAERAAVLCFAAESVAT 157 (420)
T ss_dssp EEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCS---CCB---TCC-SSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred ECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCC---CCC---CCC-CCccHHHHHHHHHHHHHHHHHHcc
Confidence 99998322 1 245577889999999999994432 121 112 2333322 2122223222211
Q ss_pred --C-CCeEEEEecch---------h-h--cccHHHHHHHHH----HhHhcCCCE-------EEe-----------ccCCC
Q 012815 222 --G-SDIVIVARTDS---------R-Q--ALSLEESLRRSR----AFADAGADV-------LFI-----------DALAS 264 (456)
Q Consensus 222 --G-~dfvIiARTDA---------~-~--~~~ldeAI~Rak----Ay~eAGAD~-------Ifi-----------e~~~s 264 (456)
+ .++-.++-|+. . . ...-+||.+=.+ +|.+.|.|+ +.+ +. -+
T Consensus 158 ~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~-ld 236 (420)
T 2fiq_A 158 DCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIH-YQ 236 (420)
T ss_dssp HHHHHHCEEEEECSSCC----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEEC-CC
T ss_pred cCCcccceEEeeeecCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCC-cC
Confidence 0 12222233331 1 1 234566666555 667899999 442 12 24
Q ss_pred HHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcCCCEEeccchHHHHHHHHHHHHH
Q 012815 265 KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELGFKLVAYPLSLIGVSVRAMQDAL 325 (456)
Q Consensus 265 ~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elGv~~Vs~p~~ll~aa~~A~~~~l 325 (456)
.+.++++.+.++ +|-++ ++..| +..++.++ +-++|++.+-+++.+..+...|+....
T Consensus 237 ~e~l~~I~~~v~-~P~LV--le~HG-gSg~~~e~l~~~v~~Gi~kiNV~t~l~~a~~~al~~l~ 296 (420)
T 2fiq_A 237 PQEAQALAQWIE-NTRMV--YEAHS-TDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALA 296 (420)
T ss_dssp GGGGHHHHHHHT-TSSCE--EEESC-CTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCEE--EecCC-CCCCCHHHHHHHHHcCCCEEEECHHHHHHHHHHHHHHH
Confidence 567778877776 56222 42222 23466655 455699999999998888777776654
No 106
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=96.52 E-value=0.02 Score=56.83 Aligned_cols=145 Identities=17% Similarity=0.122 Sum_probs=94.7
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhh-------hhcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-------s~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..+...+++. .+.+.+++..+-. +.+|.|= .+. .+++||...++.
T Consensus 78 ~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~ 156 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSK 156 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 344567777776678888999999999999998 9999999843211 2356663 455 688888887776
Q ss_pred HHh--------------------------------cc-CCcEEEeCCCCC-----------CCHHHHHHHHHHHHHhCcc
Q 012815 145 ITQ--------------------------------AV-SIPVIGDGDNGY-----------GNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 145 I~r--------------------------------a~-~iPVIaD~DtGY-----------G~~~nv~rtVk~l~~AGaa 180 (456)
|.. .+ ++||++|.++.- |..+-|....+..+.+||+
T Consensus 157 i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~ 236 (285)
T 3sz8_A 157 CGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIA 236 (285)
T ss_dssp HHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCS
T ss_pred HHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCC
Confidence 642 25 599999999873 4445566667788889999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
|+.||=-..|.+- -.+++.-++++++.+-++.++.....+|
T Consensus 237 gl~IE~H~~pd~a-l~D~~~sl~p~el~~lv~~i~~i~~~lg 277 (285)
T 3sz8_A 237 GLFLEAHPDPDRA-RCDGPSALPLHQLEGLLSQMKAIDDLVK 277 (285)
T ss_dssp EEEEEEESCGGGC-SCSSCCCEEGGGHHHHHHHHHHHHHHHT
T ss_pred EEEEEeccChhcc-CCchhhccCHHHHHHHHHHHHHHHHHhC
Confidence 9999987655321 1245444444444444444443333333
No 107
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=96.50 E-value=0.12 Score=50.68 Aligned_cols=178 Identities=20% Similarity=0.157 Sum_probs=95.8
Q ss_pred eeecccCChHHHHHHHHhCCcEE-EecchHH-hhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHH
Q 012815 91 HQGPACFDALSAKLVEKSGFSFC-FTSGFSI-SAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (456)
Q Consensus 91 lv~pgayDalSArl~e~aGfdAI-~vSG~av-Sas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~ 168 (456)
+++ ++--.-.|+.++++|+++| .+.-... .....|. ..+.. .+.++.|++.+++||++..-.|| .
T Consensus 24 ~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~---~~~i~~I~~~~~iPv~~k~r~g~------~ 90 (305)
T 2nv1_A 24 VIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMAD---PTIVEEVMNAVSIPVMAKARIGH------I 90 (305)
T ss_dssp EEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCC---HHHHHHHHHHCSSCEEEEECTTC------H
T ss_pred eee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCC---HHHHHHHHHhCCCCEEecccccc------h
Confidence 444 5544567888999999999 5431000 0000110 01222 34456677778999998776776 3
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
..++.+.++||++|..-+...|.... .++. ....|..+++-.++ ++|+.+ +
T Consensus 91 ~~~~~~~a~GAd~V~~~~~l~~~~~~-----~~i~--------------~~~~g~~v~~~~~~-------~~e~~~---a 141 (305)
T 2nv1_A 91 VEARVLEAMGVDYIDESEVLTPADEE-----FHLN--------------KNEYTVPFVCGCRD-------LGEATR---R 141 (305)
T ss_dssp HHHHHHHHHTCSEEEECTTSCCSCSS-----CCCC--------------GGGCSSCEEEEESS-------HHHHHH---H
T ss_pred HHHHHHHHCCCCEEEEeccCCHHHHH-----HHHH--------------HhccCCcEEEEeCC-------HHHHHH---H
Confidence 44566777999999732221111100 0110 01123344443332 333332 2
Q ss_pred hHhcCCCEEEecc---------------------------------------CCCHHHHHHHHHhCCCCceeeeeeccCC
Q 012815 249 FADAGADVLFIDA---------------------------------------LASKEEMKAFCEISPLVPKMANMLEGGG 289 (456)
Q Consensus 249 y~eAGAD~Ifie~---------------------------------------~~s~eei~~i~~~v~~vP~~~N~~~~~g 289 (456)
.++|||+|.+.+ ..+.+.++++.+..+ +|+. ++.. +|
T Consensus 142 -~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~-iPvi-~~a~-GG 217 (305)
T 2nv1_A 142 -IAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGK-LPVV-NFAA-GG 217 (305)
T ss_dssp -HHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTS-CSSC-EEBC-SC
T ss_pred -HHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcC-CCEE-EEec-cC
Confidence 367888887721 234566777777654 6654 1122 34
Q ss_pred C-CCCCCHHHHHhcCCCEEeccchHHH
Q 012815 290 K-TPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 290 ~-tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
- ++ -+..++.++|+.-|..+..++.
T Consensus 218 I~~~-~d~~~~~~~GadgV~vGsai~~ 243 (305)
T 2nv1_A 218 VATP-ADAALMMQLGADGVFVGSGIFK 243 (305)
T ss_dssp CCSH-HHHHHHHHTTCSCEEECGGGGG
T ss_pred CCCH-HHHHHHHHcCCCEEEEcHHHHc
Confidence 3 22 2346677889999999998875
No 108
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.49 E-value=0.04 Score=51.70 Aligned_cols=148 Identities=18% Similarity=0.189 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHH---HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHH
Q 012815 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAM---NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVM 209 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~---nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~ 209 (456)
++++.....++.|++.+++||.+ .+|-++. .+.+.++.+.++||++|++-|-. ....+++.+
T Consensus 63 ~~~~~~~~~i~~i~~~~~~pv~~---~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~------------~~~~~~~~~ 127 (248)
T 1geq_A 63 FKLREAFWIVKEFRRHSSTPIVL---MTYYNPIYRAGVRNFLAEAKASGVDGILVVDLP------------VFHAKEFTE 127 (248)
T ss_dssp CCHHHHHHHHHHHHTTCCCCEEE---EECHHHHHHHCHHHHHHHHHHHTCCEEEETTCC------------GGGHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCEEE---EeccchhhhcCHHHHHHHHHHCCCCEEEECCCC------------hhhHHHHHH
Confidence 46777888999999988899876 1232331 12577889999999999996542 111222222
Q ss_pred HHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCC-EEEeccCC------------CHHHHHHHHHhCC
Q 012815 210 RIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD-VLFIDALA------------SKEEMKAFCEISP 276 (456)
Q Consensus 210 kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD-~Ifie~~~------------s~eei~~i~~~v~ 276 (456)
. + ++.|.++++..-... . .++.+++.+. +| .|++-.++ ..+.++++.+.+.
T Consensus 128 ~---~----~~~g~~~~~~i~~~t-----~---~e~~~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~ 191 (248)
T 1geq_A 128 I---A----REEGIKTVFLAAPNT-----P---DERLKVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR 191 (248)
T ss_dssp H---H----HHHTCEEEEEECTTC-----C---HHHHHHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHCS
T ss_pred H---H----HHhCCCeEEEECCCC-----H---HHHHHHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC
Confidence 2 2 223544444332111 1 2344444443 56 66543221 1246677777664
Q ss_pred CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 277 LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 277 ~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+|+.+ ++|-+..-+..++.+.|+..|+.|..++..
T Consensus 192 -~pi~~----~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 192 -NKVAV----GFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp -SCEEE----ESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred -CCEEE----EeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 56542 344332234567778899999999988775
No 109
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.47 E-value=0.071 Score=52.88 Aligned_cols=133 Identities=12% Similarity=0.111 Sum_probs=86.7
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE--ecchhhc-ccH-HHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA--RTDSRQA-LSL-EESLR 244 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA--RTDA~~~-~~l-deAI~ 244 (456)
..++...++||++|++=--. +. -.|..++.+.++.+++++++.|..+++.- |-..... .+- +-..+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~------~~----d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~ 181 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLW------RS----DEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIID 181 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEE------CT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEc------CC----CccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHH
Confidence 45677888999999942211 00 01236788888888888887777777763 2222211 122 23344
Q ss_pred HHHHhHhcCCCEEEeccC----CCHHHHHHHHHh----CCCCc-eeeeeeccCCCCCCC---CHHHHHhcCCCEEeccch
Q 012815 245 RSRAFADAGADVLFIDAL----ASKEEMKAFCEI----SPLVP-KMANMLEGGGKTPIL---NPLELEELGFKLVAYPLS 312 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~----~s~eei~~i~~~----v~~vP-~~~N~~~~~g~tp~l---t~~eL~elGv~~Vs~p~~ 312 (456)
+++.+.+.|||.+-++.+ .+.++++++++. .+ +| +. +. +|.++.. ...+..+.|++-++++-.
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~-~P~Vv---~a-GG~~~~~~~~~~~~a~~aGa~Gv~vGRa 256 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN-MPWVI---LS-SGVDEKLFPRAVRVAMEAGASGFLAGRA 256 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC-SCEEE---CC-TTSCTTTHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC-CCeEE---Ee-cCCCHHHHHHHHHHHHHcCCeEEEEehH
Confidence 589999999999988764 467888888887 44 45 32 22 3433211 257788899999999988
Q ss_pred HHHH
Q 012815 313 LIGV 316 (456)
Q Consensus 313 ll~a 316 (456)
.+.+
T Consensus 257 I~q~ 260 (304)
T 1to3_A 257 VWSS 260 (304)
T ss_dssp HHGG
T ss_pred HhCc
Confidence 8866
No 110
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=96.45 E-value=0.044 Score=54.72 Aligned_cols=129 Identities=19% Similarity=0.327 Sum_probs=92.3
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.+++....+.++++.+.|..+++|- +||. +.++.+++|++++++. |+++.| |.|+.....+
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~d~~~v~avr~a~---g~~~~l--~vDan~~~~~ 198 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKIK-------VGKD------DIATDIARIQEIRKRV---GSAVKL--RLDANQGWRP 198 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEEE-------CCSS------CHHHHHHHHHHHHHHH---CSSSEE--EEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEE-------eCCC------CHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCCH
Confidence 44677788888899999999999982 3441 3566788888887774 567766 6677777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~ 312 (456)
+++++.++++.+.+.+..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-..
T Consensus 199 ~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 199 KEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATD-TPIMAD-----ES--VFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCC-CCEEEc-----CC--CCCHHHHHHHHHhCCCCEEEeehh
Confidence 99999999999955667788864 36778889988876 787654 21 23544444 334 777777554
Q ss_pred HH
Q 012815 313 LI 314 (456)
Q Consensus 313 ll 314 (456)
-.
T Consensus 271 ~~ 272 (366)
T 1tkk_A 271 KA 272 (366)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 111
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=96.42 E-value=0.075 Score=53.78 Aligned_cols=138 Identities=10% Similarity=0.136 Sum_probs=95.1
Q ss_pred CcEEEeCCCCCC--CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 151 IPVIGDGDNGYG--NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 151 iPVIaD~DtGYG--~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
+|+.+- .|+. ++....+.++++.++|..+++|- +||. +.++.+++|++++++. |+++.|.
T Consensus 133 vp~y~~--~~~~~~~~~~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~~~e~v~avR~a~---G~~~~l~ 194 (389)
T 2oz8_A 133 VKAYAS--GLDFHLDDDAFVSLFSHAASIGYSAFKIK-------VGHR------DFDRDLRRLELLKTCV---PAGSKVM 194 (389)
T ss_dssp EEEEEE--CCBTTCCHHHHHHHHHHHHHTTCCEEEEE-------CCCS------SHHHHHHHHHHHHTTS---CTTCEEE
T ss_pred eEEEEe--CCCcCCCHHHHHHHHHHHHHhCCCEEEEc-------cCCC------CHHHHHHHHHHHHHhh---CCCCeEE
Confidence 555543 2443 67788888899999999999982 4551 3456678888887664 5676665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhC-CCCceeeeeeccCCCCCCCCHHHHH---h
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEIS-PLVPKMANMLEGGGKTPILNPLELE---E 301 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v-~~vP~~~N~~~~~g~tp~lt~~eL~---e 301 (456)
.|+.....++++++-++++.++|.+..|+|-+ .+.+.++++.+.+ + +|+..+ +. . +.+++. +
T Consensus 195 --vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~-iPIa~d-----E~--~-~~~~~~~~i~ 263 (389)
T 2oz8_A 195 --IDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTW-TQINSG-----EY--L-DLQGKRLLLE 263 (389)
T ss_dssp --EECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCS-SEEEEC-----TT--C-CHHHHHHHHH
T ss_pred --EECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCC-CCEEeC-----CC--C-CHHHHHHHHH
Confidence 37777778999999999999977777788874 2678889999887 5 776543 22 2 554444 3
Q ss_pred cC-CCEEeccchHHHHHH
Q 012815 302 LG-FKLVAYPLSLIGVSV 318 (456)
Q Consensus 302 lG-v~~Vs~p~~ll~aa~ 318 (456)
.| ++.|... ..+..++
T Consensus 264 ~~~~d~v~ik-GGit~a~ 280 (389)
T 2oz8_A 264 AHAADILNVH-GQVTDVM 280 (389)
T ss_dssp TTCCSEEEEC-SCHHHHH
T ss_pred cCCCCEEEEC-cCHHHHH
Confidence 45 7777776 4444443
No 112
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=96.38 E-value=0.065 Score=52.31 Aligned_cols=152 Identities=19% Similarity=0.168 Sum_probs=92.2
Q ss_pred CCcEEEeCCCCCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh---C---
Q 012815 150 SIPVIGDGDNGYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES---G--- 222 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~---G--- 222 (456)
+.+|++|.=.+ +. ..+...++.+.+.|++.+.+--- .| .+-|++++++.++. |
T Consensus 56 g~~VflDlK~~--DIpnTv~~a~~~~~~~gad~vTVh~~---------~G---------~~~~~aa~~~~~~~~~~g~~~ 115 (259)
T 3tfx_A 56 GYKIFLDLKMH--DIPNTVYNGAKALAKLGITFTTVHAL---------GG---------SQMIKSAKDGLIAGTPAGHSV 115 (259)
T ss_dssp TCEEEEEEEEC--SCHHHHHHHHHHHHTTTCSEEEEEGG---------GC---------HHHHHHHHHHHHHHSCTTSCC
T ss_pred CCcEEEEeccc--ccchHHHHHHHHHHhcCCCEEEEcCC---------CC---------HHHHHHHHHHHHHhcccCCCC
Confidence 89999998864 53 44667788888999999998332 11 22355565554321 2
Q ss_pred CCeEEEEecchhh----------cccH-HHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCC
Q 012815 223 SDIVIVARTDSRQ----------ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKT 291 (456)
Q Consensus 223 ~dfvIiARTDA~~----------~~~l-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~t 291 (456)
+.++.+.-.-+.. ...+ +.++++|+...++|.|.++.. .+|++.+.+..+ |..+-++ ||-.
T Consensus 116 ~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s----~~e~~~ir~~~~--~~f~~vt--PGIr 187 (259)
T 3tfx_A 116 PKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICS----PLEVKKLHENIG--DDFLYVT--PGIR 187 (259)
T ss_dssp CEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECC----GGGHHHHHHHHC--SSSEEEE--CCCC
T ss_pred ceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHhhcC--CccEEEc--CCcC
Confidence 2244443322221 1133 356678999999999999874 245666655443 2222222 3333
Q ss_pred CC----------CCHHHHHhcCCCEEeccchHHHHH--HHHHHHHHHHHH
Q 012815 292 PI----------LNPLELEELGFKLVAYPLSLIGVS--VRAMQDALTAIK 329 (456)
Q Consensus 292 p~----------lt~~eL~elGv~~Vs~p~~ll~aa--~~A~~~~l~~i~ 329 (456)
|. .|+.+..+.|.+.++.|...+.+. ..+++...+++.
T Consensus 188 ~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 188 PAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFN 237 (259)
T ss_dssp CC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHT
T ss_pred CCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 32 468899999999999998877753 344444444454
No 113
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.35 E-value=0.021 Score=58.70 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=102.5
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhh-------hhcccC---CCCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALP---DTGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-------s~lG~P---D~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..++..+++. ++.+.++|.-+.. +.+|.| .+|. .|++|+...++.
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~ 271 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEY 271 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHH
Confidence 344667777776778888999999999999988 9999999765422 245666 3455 789999888777
Q ss_pred HHh----------------------------------ccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012815 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (456)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~p 190 (456)
|.. .+++||++|.-.|.|...-|....+..+.+||+|+.||=-..|
T Consensus 272 i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~p 351 (385)
T 3nvt_A 272 IMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDP 351 (385)
T ss_dssp HHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCG
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCCh
Confidence 642 2578999998777776655666677788899999999986655
Q ss_pred CCccCCCCccccCHHHHHHHHHHHHHH
Q 012815 191 KGCGHTRGRKVVSREEAVMRIKAAVDA 217 (456)
Q Consensus 191 K~CGH~~gk~lvp~ee~v~kI~AA~~A 217 (456)
.+-- .+++.-++++++.+-++.++..
T Consensus 352 d~a~-~D~~~sl~p~el~~lv~~i~~i 377 (385)
T 3nvt_A 352 AVAL-SDSAQQMDIPEFEEFWNAILAS 377 (385)
T ss_dssp GGCS-SCTTTSBCHHHHHHHHHHHHHH
T ss_pred hhcC-CcccccCCHHHHHHHHHHHHHH
Confidence 4433 4566667777776666655543
No 114
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=96.35 E-value=0.18 Score=50.58 Aligned_cols=131 Identities=17% Similarity=0.191 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
++++...+.++++.++|..+++|- +||......-+.++.+++|++++++. |+++.|. .|+......++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~--vDan~~~~~~~ 215 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLH-------TWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLM--IDAFHWYSRTD 215 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE-------CCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEE--EECCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-------CCcCccccccchHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCHHH
Confidence 467788888999999999999983 34421111125577788888887764 5676665 36666678899
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-HHHHH---hcC-CCEEeccchH
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN-PLELE---ELG-FKLVAYPLSL 313 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt-~~eL~---elG-v~~Vs~p~~l 313 (456)
+++-++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+ .+++. +.| ++.|..-..-
T Consensus 216 a~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~i~~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 216 ALALGRGLEKLGFD--WIEEPMDEQSLSSYKWLSDNLD-IPVVGP-----ES--AAGKHWHRAEWIKAGACDILRTGVND 285 (382)
T ss_dssp HHHHHHHHHTTTCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----SS--CSSHHHHHHHHHHTTCCSEEEECHHH
T ss_pred HHHHHHHHHhcCCC--EEeCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--ccCcHHHHHHHHHcCCCCEEeeCchh
Confidence 99999999999877 55653 36788899998876 787643 22 235 44444 344 7777775544
Q ss_pred H
Q 012815 314 I 314 (456)
Q Consensus 314 l 314 (456)
.
T Consensus 286 ~ 286 (382)
T 1rvk_A 286 V 286 (382)
T ss_dssp H
T ss_pred c
Confidence 3
No 115
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=96.27 E-value=0.12 Score=51.91 Aligned_cols=133 Identities=16% Similarity=0.222 Sum_probs=92.5
Q ss_pred CcEEEeCCCCCC--CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 151 IPVIGDGDNGYG--NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 151 iPVIaD~DtGYG--~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
+|+.+- .|++ +++...+.++++.++|..+++|- +||. +.++.+++|++++++. |+++.|
T Consensus 134 v~~y~~--~~~~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---G~d~~l- 194 (371)
T 2ovl_A 134 VPVYAG--GIDLELPVADLKTQADRFLAGGFRAIKMK-------VGRP------DLKEDVDRVSALREHL---GDSFPL- 194 (371)
T ss_dssp EEEEEE--CCBTTSCHHHHHHHHHHHHHTTCSCEEEE-------CCCS------SHHHHHHHHHHHHHHH---CTTSCE-
T ss_pred eeEEEe--CCCcCCCHHHHHHHHHHHHHcCCCEEEEC-------CCCC------CHHHHHHHHHHHHHHh---CCCCeE-
Confidence 565442 3442 67778888999999999999982 4552 4566788888887775 566665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---c
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L 302 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---l 302 (456)
+.|+......+++++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++.+ .
T Consensus 195 -~vDan~~~~~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~ 263 (371)
T 2ovl_A 195 -MVDANMKWTVDGAIRAARALAPFDLH--WIEEPTIPDDLVGNARIVRESG-HTIAGG-----EN--LHTLYDFHNAVRA 263 (371)
T ss_dssp -EEECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHHHC-SCEEEC-----TT--CCSHHHHHHHHHH
T ss_pred -EEECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHc
Confidence 45777777899999999999999887 45653 35778889988876 787654 21 235555443 3
Q ss_pred -CCCEEeccchH
Q 012815 303 -GFKLVAYPLSL 313 (456)
Q Consensus 303 -Gv~~Vs~p~~l 313 (456)
+++.|..-..-
T Consensus 264 ~~~d~v~ik~~~ 275 (371)
T 2ovl_A 264 GSLTLPEPDVSN 275 (371)
T ss_dssp TCCSEECCCTTT
T ss_pred CCCCEEeeCccc
Confidence 47777775443
No 116
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=96.27 E-value=0.072 Score=53.35 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=89.5
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.+++....+.++++.++|..+++| ++|| +.+..+++|++++++ .|+++.| |.|+.....++
T Consensus 144 ~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a---~g~~~~l--~vDan~~~~~~ 204 (371)
T 2ps2_A 144 VGEPEDMRARVAKYRAKGYKGQSV-------KISG-------EPVTDAKRITAALAN---QQPDEFF--IVDANGKLSVE 204 (371)
T ss_dssp SCCHHHHHHHHHHHHTTTCCEEEE-------ECCS-------CHHHHHHHHHHHTTT---CCTTCEE--EEECTTBCCHH
T ss_pred CCCHHHHHHHHHHHHHhChheEEe-------ecCC-------CHHHHHHHHHHHHHh---cCCCCEE--EEECCCCcCHH
Confidence 357888888899999999999998 2344 356667888877665 3667776 66887777899
Q ss_pred HHHHHHHHh-HhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---c-CCCEEeccchHH
Q 012815 241 ESLRRSRAF-ADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---L-GFKLVAYPLSLI 314 (456)
Q Consensus 241 eAI~RakAy-~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---l-Gv~~Vs~p~~ll 314 (456)
++++-++++ .+.|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.+++++ . .++.|..-..-.
T Consensus 205 ~a~~~~~~l~~~~~i---~iE~P~~~~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~~ 273 (371)
T 2ps2_A 205 TALRLLRLLPHGLDF---ALEAPCATWRECISLRRKTD-IPIIYD-----EL--ATNEMSIVKILADDAAEGIDLKISKA 273 (371)
T ss_dssp HHHHHHHHSCTTCCC---EEECCBSSHHHHHHHHTTCC-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEEEHHHH
T ss_pred HHHHHHHHHHhhcCC---cCcCCcCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCCCEEEechhhc
Confidence 999999999 88876 77763 57788999988876 777643 21 235555544 3 477777755443
No 117
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.19 E-value=0.078 Score=50.34 Aligned_cols=185 Identities=12% Similarity=0.102 Sum_probs=107.3
Q ss_pred eeecccCChHHHH-HHHHhC--CcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCC-HHH
Q 012815 91 HQGPACFDALSAK-LVEKSG--FSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN-AMN 166 (456)
Q Consensus 91 lv~pgayDalSAr-l~e~aG--fdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~-~~n 166 (456)
++.....|.-.|. ++++.| .+.+=++ ..+-. ..|.+ .+ +.+.+..+.+|+.|.=.+ + +..
T Consensus 16 ilAlD~~~~~~a~~~v~~~~~~v~~~Kvg-~~lf~-~~G~~---------~v---~~l~~~~g~~v~lD~Kl~--DipnT 79 (228)
T 3m47_A 16 ILAMDLMNRDDALRVTGEVREYIDTVKIG-YPLVL-SEGMD---------II---AEFRKRFGCRIIADFKVA--DIPET 79 (228)
T ss_dssp EEECCCCSHHHHHHHHHTTTTTCSEEEEE-HHHHH-HHCTH---------HH---HHHHHHHCCEEEEEEEEC--SCHHH
T ss_pred EEEeCCCCHHHHHHHHHHcCCcccEEEEc-HHHHH-hcCHH---------HH---HHHHhcCCCeEEEEEeec--ccHhH
Confidence 4455555555553 445555 5566663 33321 13431 22 233332468899998876 5 456
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc-ccHHH-HHH
Q 012815 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA-LSLEE-SLR 244 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~-~~lde-AI~ 244 (456)
+.+.++.+.++||+.|.+--.. | .+ -+++++++.++.|...++...++.... ..+++ +.+
T Consensus 80 v~~~~~~~~~~gad~vtvh~~~---------G------~~---~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~ 141 (228)
T 3m47_A 80 NEKICRATFKAGADAIIVHGFP---------G------AD---SVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADE 141 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTT---------C------HH---HHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeccC---------C------HH---HHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHH
Confidence 7888899999999998873221 1 12 344455555444556777788776542 22233 344
Q ss_pred HHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCC-CceeeeeeccCCCCC-CCCHHHHHhcCCCEEeccchHHHH
Q 012815 245 RSRAFADAGADVLFIDALASKEEMKAFCEISPL-VPKMANMLEGGGKTP-ILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp-~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.++.-.++|.|.+++.+ +..++++++.+..+. .+. +. ||-.+ .-++ +..+.|.+.++.|...+.+
T Consensus 142 ~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~~~~~~i---v~--PGI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPS-TRPERLSRLREIIGQDSFL---IS--PGVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp HHHHHHHTTCCEEECCS-SCHHHHHHHHHHHCSSSEE---EE--CC----------CGGGTCSEEEECHHHHTS
T ss_pred HHHHHHHhCCcEEEECC-CChHHHHHHHHhcCCCCEE---Ee--cCcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 56777789999988765 456788888877652 222 22 22112 1245 7779999999999776654
No 118
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.19 E-value=0.23 Score=47.71 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=80.3
Q ss_pred CCHHHHH---HHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHH
Q 012815 133 ISYGEMV---DQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVM 209 (456)
Q Consensus 133 lt~~Eml---~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~ 209 (456)
++..|++ ..++.+|+..++|+|++ +..++ ..++||+|||+.... .|..+.
T Consensus 76 l~~~~~~~~a~~l~~l~~~~~~~liIn------d~~~l------A~~~gAdGVHLg~~d-------------l~~~~~-- 128 (243)
T 3o63_A 76 LQARDELAACEILADAAHRYGALFAVN------DRADI------ARAAGADVLHLGQRD-------------LPVNVA-- 128 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEEEEE------SCHHH------HHHHTCSEEEECTTS-------------SCHHHH--
T ss_pred CCHHHHHHHHHHHHHHHHhhCCEEEEe------CHHHH------HHHhCCCEEEecCCc-------------CCHHHH--
Confidence 4555554 45666778889999996 22222 445799999997543 122211
Q ss_pred HHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-----------CCHHHHHHHHHhCC-C
Q 012815 210 RIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISP-L 277 (456)
Q Consensus 210 kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~-~ 277 (456)
++.++++.+ ++.+ ....+|+ +...++|||.|.+-.+ ...+.++++++..+ .
T Consensus 129 --------r~~~~~~~~-iG~S----~ht~~Ea----~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~ 191 (243)
T 3o63_A 129 --------RQILAPDTL-IGRS----THDPDQV----AAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDD 191 (243)
T ss_dssp --------HHHSCTTCE-EEEE----ECSHHHH----HHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---C
T ss_pred --------HHhhCCCCE-EEEe----CCCHHHH----HHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCC
Confidence 222344444 4443 1344453 3344689999988431 23566777776532 3
Q ss_pred CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 278 VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 278 vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+|+.+ .+|-++ -+..++.+.|+.-|..+..++.
T Consensus 192 iPvvA----iGGI~~-~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 192 KPWFA----IGGINA-QRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp CCEEE----ESSCCT-TTHHHHHHTTCCCEEESHHHHT
T ss_pred CCEEE----ecCCCH-HHHHHHHHcCCCEEEEeHHHhC
Confidence 55432 235443 4689999999999999888775
No 119
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.18 E-value=1.1 Score=44.44 Aligned_cols=209 Identities=18% Similarity=0.191 Sum_probs=140.7
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhh-cccCCCCCCCHHHHHHHHHHHHh--ccC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAAR-LALPDTGFISYGEMVDQGQLITQ--AVS 150 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~-lG~PD~~~lt~~Eml~~~r~I~r--a~~ 150 (456)
.+-|....+.+--+...|+++.-+++.+ |+.+.+.|.-.+-+.. .. .| ++.+...++.+++ ..+
T Consensus 10 ~~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~-~~~~g--------~~~~~~~v~~~A~~~~~~ 80 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAA-RHMTG--------FKTVVAMVKALIEEMNIT 80 (288)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHTSC--------HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhh-hhcCC--------HHHHHHHHHHHHHhcCCC
Confidence 3456665666666889999999888765 6668888876543322 12 23 3446677788888 789
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE--
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV-- 228 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi-- 228 (456)
+||..=.|.|. + .+.+++.+++|...|.| |.. | .|.||=+++-+..++-++..| .-|=
T Consensus 81 VPValHlDHg~-~----~e~i~~ai~~GFtSVMi-DgS------~------~p~eeNi~~Tk~vv~~ah~~g--vsVEaE 140 (288)
T 3q94_A 81 VPVAIHLDHGS-S----FEKCKEAIDAGFTSVMI-DAS------H------HPFEENVETTKKVVEYAHARN--VSVEAE 140 (288)
T ss_dssp SCEEEEEEEEC-S----HHHHHHHHHHTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHTTT--CEEEEE
T ss_pred CcEEEECCCCC-C----HHHHHHHHHcCCCeEEE-eCC------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEE
Confidence 99999999994 3 44566778899999999 542 3 478888888888888776433 1111
Q ss_pred -Eec----chh-----hcccHHHHHHHHHHhH-hcCCCEEEe-----ccC------CCHHHHHHHHHhCCCCceeeeeec
Q 012815 229 -ART----DSR-----QALSLEESLRRSRAFA-DAGADVLFI-----DAL------ASKEEMKAFCEISPLVPKMANMLE 286 (456)
Q Consensus 229 -ART----DA~-----~~~~ldeAI~RakAy~-eAGAD~Ifi-----e~~------~s~eei~~i~~~v~~vP~~~N~~~ 286 (456)
+++ |.. .-..-+| |+.|. +.|+|++=+ +|. -+.+.++++.+.++ +|+. ++
T Consensus 141 lG~vgG~Ed~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~-vpLV---lH 212 (288)
T 3q94_A 141 LGTVGGQEDDVIAEGVIYADPAE----CKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG-VPLV---LH 212 (288)
T ss_dssp ESBCBCSCSSCGGGGCBCCCHHH----HHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC-SCEE---EC
T ss_pred eeeeccccCCcCCccccCCCHHH----HHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC-CCEE---Ee
Confidence 111 110 0123344 44454 699998864 332 25788899988876 6754 45
Q ss_pred cCCCCCCCCHHHH---HhcCCCEEeccchHHHHHHHHHHHHHH
Q 012815 287 GGGKTPILNPLEL---EELGFKLVAYPLSLIGVSVRAMQDALT 326 (456)
Q Consensus 287 ~~g~tp~lt~~eL---~elGv~~Vs~p~~ll~aa~~A~~~~l~ 326 (456)
++. .++.+++ -+.|+.-|=+..-+..+.+.++++.+.
T Consensus 213 GgS---G~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~ 252 (288)
T 3q94_A 213 GGT---GIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLN 252 (288)
T ss_dssp CCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCC---CCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHHH
Confidence 432 3555554 468999999999999999999988855
No 120
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.18 E-value=0.05 Score=58.11 Aligned_cols=193 Identities=12% Similarity=0.082 Sum_probs=108.4
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCC-CCCC----HHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN-GYGN----AMNVKRTVKGYI 175 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~Dt-GYG~----~~nv~rtVk~l~ 175 (456)
-|+..++.|++.+++.=.. ++.-| | .....+++.+++|++.+.+||+++.-- -+-+ ..-..+.++++.
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~--~~~~~-~----~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNIT--SFRDC-P----LKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC-----CC-C----GGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCC--ccccc-c----CCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 4677777899988876221 11111 1 112246677888999899999986311 0100 112567788999
Q ss_pred HhCccEEEeCCCCCCCC-----ccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE---Eecc---------------
Q 012815 176 KAGFAGIILEDQVSPKG-----CGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---ARTD--------------- 232 (456)
Q Consensus 176 ~AGaaGI~IEDq~~pK~-----CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi---ARTD--------------- 232 (456)
++||+-|.|--....+. .++ + ... .++++++.... |.+.+++ +|..
T Consensus 358 ~aGad~V~igt~~~~~~~~~~~~~~--~--~~~-~~~i~~~~~~~------g~~~ivv~iD~~~~~~~~~~~~~~~~~~~ 426 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYAAEKYYELGN--R--GDG-TSPIETISKAY------GAQAVVISVDPKRVYVNSQADTKNKVFET 426 (555)
T ss_dssp HHTCSEEEECHHHHHHHHHHHHTTS--C--CCS-CSHHHHHHHHH------CGGGEEEEECEEEEEESSGGGCSSCCEEC
T ss_pred HcCCCEEEECCHHhhCchhhccccc--c--ccC-HHHHHHHHHHh------CCCcEEEEEEccccccccccccccccccc
Confidence 99999998843221100 010 0 001 13344433221 2112221 2210
Q ss_pred ------h-------hhcccHH-----HHHHHHHHhHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeec
Q 012815 233 ------S-------RQALSLE-----ESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLE 286 (456)
Q Consensus 233 ------A-------~~~~~ld-----eAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~ 286 (456)
. ....+.+ .+++-++.++++||+.|.+.++ ++.+.++++.+.++ +|+.+|
T Consensus 427 ~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~-iPVIas--- 502 (555)
T 1jvn_A 427 EYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVK-IPVIAS--- 502 (555)
T ss_dssp SSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCS-SCEEEC---
T ss_pred cccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCC-ccEEEE---
Confidence 0 0011221 2578899999999999998654 47889999999876 787654
Q ss_pred cCCCCCCCCHHHHHh-cCCCEEeccchHHHH
Q 012815 287 GGGKTPILNPLELEE-LGFKLVAYPLSLIGV 316 (456)
Q Consensus 287 ~~g~tp~lt~~eL~e-lGv~~Vs~p~~ll~a 316 (456)
||-...-...++.+ .|+.-|+.+..++..
T Consensus 503 -GGi~s~~d~~~~~~~~G~~gvivg~a~~~~ 532 (555)
T 1jvn_A 503 -SGAGVPEHFEEAFLKTRADACLGAGMFHRG 532 (555)
T ss_dssp -SCCCSHHHHHHHHHHSCCSEEEESHHHHTT
T ss_pred -CCCCCHHHHHHHHHhcCChHHHHHHHHHcC
Confidence 34221112345555 799999998865543
No 121
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.18 E-value=0.088 Score=51.23 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=100.8
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhh-------hcccCC---CCC-CCHHHHHHHHH
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALPD---TGF-ISYGEMVDQGQ 143 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas-------~lG~PD---~~~-lt~~Eml~~~r 143 (456)
...-+.|++..++-+..++-.+||..++..+++. ++.+.+++.-+-.. .+|.|= .+. .+++|++..+.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHH
Confidence 3455677887777778888999999999999999 99999997554321 246553 344 38888888776
Q ss_pred HHH----------------------------------hccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC
Q 012815 144 LIT----------------------------------QAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS 189 (456)
Q Consensus 144 ~I~----------------------------------ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~ 189 (456)
.+. +..++||++|.+.+-|...-+....+..+..||.|+.||--..
T Consensus 152 ~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 152 YIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp HHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred HHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 553 1247999999999877644344455667789999999998765
Q ss_pred CCCccCCCCccccCHHHHHHHHHHHHHH
Q 012815 190 PKGCGHTRGRKVVSREEAVMRIKAAVDA 217 (456)
Q Consensus 190 pK~CGH~~gk~lvp~ee~v~kI~AA~~A 217 (456)
|.+-- .+|+.-++++++.+-++.++..
T Consensus 232 ~d~al-~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 232 PEKAL-SDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp GGGCS-SCTTTCBCHHHHHHHHHHHHHT
T ss_pred ccccC-ChhhcCCCHHHHHHHHHHHHHH
Confidence 43321 1566667888887777666543
No 122
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=96.18 E-value=0.24 Score=50.39 Aligned_cols=167 Identities=14% Similarity=0.124 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHh------ccCCcEEEeCCCCC---C-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCc-ccc
Q 012815 134 SYGEMVDQGQLITQ------AVSIPVIGDGDNGY---G-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-KVV 202 (456)
Q Consensus 134 t~~Eml~~~r~I~r------a~~iPVIaD~DtGY---G-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk-~lv 202 (456)
..+.+++..+...+ ..+.||++-+ .|- . +++...+.++.+.. ++++|.|.=. |-+..|. .+.
T Consensus 124 G~~~~~~~l~~~~~~~~~~~~~~~pv~vni-ggn~~t~~~~~dy~~~~~~~~~-~ad~ielNis-----CPn~~G~~~l~ 196 (367)
T 3zwt_A 124 GLSVVEHRLRARQQKQAKLTEDGLPLGVNL-GKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVS-----SPNTAGLRSLQ 196 (367)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHTTCCEEEEE-CCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECC-----CTTSTTGGGGG
T ss_pred cHHHHHHHHHHHhhhccccccCCceEEEEE-ecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECC-----CCCCCCccccC
Confidence 45666665543111 2368999987 221 1 23455566666543 6888877554 4443332 344
Q ss_pred CHHHHHHHHHHHHHHhHh----hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC---------------
Q 012815 203 SREEAVMRIKAAVDARKE----SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA--------------- 263 (456)
Q Consensus 203 p~ee~v~kI~AA~~Ar~~----~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~--------------- 263 (456)
..+.+.+-+++++++++. ...++.|--|-|- ..++..+-|++.+++|||.|.+....
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~----~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~ 272 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL----TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSET 272 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC----CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSS
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCC----CHHHHHHHHHHHHHcCCCEEEEeCCCccccccccccccccc
Confidence 555555555666555432 2234444444432 23677888999999999999987421
Q ss_pred -----------CHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 264 -----------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 264 -----------s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.+.++++.+.++ .+|+..| ||-...-+..+.-+.|...|..+..++.
T Consensus 273 gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~----GGI~s~~da~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 273 GGLSGKPLRDLSTQTIREMYALTQGRVPIIGV----GGVSSGQDALEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp SEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE----SSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CCcCCcccchhHHHHHHHHHHHcCCCceEEEE----CCCCCHHHHHHHHHcCCCEEEECHHHHh
Confidence 1367888888884 3787655 3422112234555689999998888754
No 123
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=96.17 E-value=0.26 Score=48.90 Aligned_cols=199 Identities=13% Similarity=0.075 Sum_probs=121.3
Q ss_pred ccHHHHHHHHHhCCCcee---ecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCC
Q 012815 75 LSPAKSLRQILELPGVHQ---GPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSI 151 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv---~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~i 151 (456)
+.-...|.+++.-.-|++ |.+.-++--|..+.++|.-.+... ..++.+++.+.++.+.+.++.
T Consensus 13 ~~~~t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~--------------~~~~~~~l~~~i~~i~~~~~~ 78 (326)
T 3bo9_A 13 MTVRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGS--------------GAMKPDDLRKAISELRQKTDK 78 (326)
T ss_dssp CCCCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEEC--------------TTCCHHHHHHHHHHHHTTCSS
T ss_pred eeecchhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCC--------------CCCCHHHHHHHHHHHHHhcCC
Confidence 333456777776555653 447778888888888885333321 235788888888888877777
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 152 PVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
|+.+..=. .++ ...+.++.+.++|++.|++--. . | .+.+++++. . +..|+...
T Consensus 79 p~gVnl~~--~~~-~~~~~~~~~~~~g~d~V~l~~g-------~-------p-~~~~~~l~~-------~--g~~v~~~v 131 (326)
T 3bo9_A 79 PFGVNIIL--VSP-WADDLVKVCIEEKVPVVTFGAG-------N-------P-TKYIRELKE-------N--GTKVIPVV 131 (326)
T ss_dssp CEEEEEET--TST-THHHHHHHHHHTTCSEEEEESS-------C-------C-HHHHHHHHH-------T--TCEEEEEE
T ss_pred CEEEEEec--cCC-CHHHHHHHHHHCCCCEEEECCC-------C-------c-HHHHHHHHH-------c--CCcEEEEc
Confidence 87665211 122 2355667788899999998221 1 2 344555432 1 23444322
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEEEecc---------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVLFIDA---------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL 302 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el 302 (456)
. .. +.++.+.++|||.|.+++ ..+.+.+.++.+.+. +|+++. ||-...-+..++.++
T Consensus 132 ~-----s~----~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~-iPviaa----GGI~~~~dv~~al~~ 197 (326)
T 3bo9_A 132 A-----SD----SLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVN-IPVIAA----GGIADGRGMAAAFAL 197 (326)
T ss_dssp S-----SH----HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHH
T ss_pred C-----CH----HHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcC-CCEEEE----CCCCCHHHHHHHHHh
Confidence 1 22 335567789999999965 244577788887775 676543 343211234556678
Q ss_pred CCCEEeccchHHHH----HHHHHHHHHHHH
Q 012815 303 GFKLVAYPLSLIGV----SVRAMQDALTAI 328 (456)
Q Consensus 303 Gv~~Vs~p~~ll~a----a~~A~~~~l~~i 328 (456)
|..-|..+..++.+ +....++++...
T Consensus 198 GA~gV~vGs~~~~~~e~~~~~~~k~~~~~~ 227 (326)
T 3bo9_A 198 GAEAVQMGTRFVASVESDVHPVYKEKIVKA 227 (326)
T ss_dssp TCSEEEESHHHHTBSSCCSCHHHHHHHHHC
T ss_pred CCCEEEechHHHcCccccccHHHHHHHHhc
Confidence 99999999887765 334555555333
No 124
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=96.15 E-value=0.037 Score=56.17 Aligned_cols=125 Identities=17% Similarity=0.182 Sum_probs=88.7
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++...+.++++.++|..+++|- +|+ +.++.+++|++++++. |+++.| |.|+.....+
T Consensus 142 g~~~~e~~~~~a~~~~~~Gf~~vKik-------~g~-------~~~~~~e~v~avR~a~---g~d~~l--~vDan~~~~~ 202 (397)
T 2qde_A 142 GAGEPEAVAEEALAVLREGFHFVKLK-------AGG-------PLKADIAMVAEVRRAV---GDDVDL--FIDINGAWTY 202 (397)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSCEEEE-------CCS-------CHHHHHHHHHHHHHHH---CTTSCE--EEECTTCCCH
T ss_pred CCCCHHHHHHHHHHHHHhhhhheeec-------ccC-------CHHHHHHHHHHHHHhh---CCCCEE--EEECCCCCCH
Confidence 44577888888999999999999982 333 4466678888887764 567666 6787777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHH---HhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL---~elG-v~~Vs~p~~ 312 (456)
+++++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+..++ -+.| ++.|..-+.
T Consensus 203 ~~a~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 203 DQALTTIRALEKYNLS--KIEQPLPAWDLDGMARLRGKVA-TPIYAD-----ES--AQELHDLLAIINKGAADGLMIKTQ 272 (397)
T ss_dssp HHHHHHHHHHGGGCCS--CEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhCCCC--EEECCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEecc
Confidence 9999999999999877 56653 36778889988876 776543 22 2344443 3444 777776444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
-
T Consensus 273 ~ 273 (397)
T 2qde_A 273 K 273 (397)
T ss_dssp H
T ss_pred c
Confidence 3
No 125
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.08 E-value=0.097 Score=53.27 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCcccc-CHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVV-SREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lv-p~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+.+++.+++|++||.|--.- .| ||...-+|. +. ...-..+-|+|++++. |++ .|..|.-
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~av---g~~-~V~vrls 241 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGS-LENRCRFALEIVEAVANEI---GSD-RVGIRIS 241 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCcc-HHHhHHHHHHHHHHHHHHh---cCC-ceEEEec
Confidence 356677888889999999986531 01 222222221 21 1122344445554443 444 4445653
Q ss_pred hh-------hcccHHHHHHHHHHhHhcCCCEEEeccC------C---CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH
Q 012815 233 SR-------QALSLEESLRRSRAFADAGADVLFIDAL------A---SKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (456)
Q Consensus 233 A~-------~~~~ldeAI~RakAy~eAGAD~Ifie~~------~---s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~ 296 (456)
.. ....++++++-++++.++|+|.|-+... + ..+.++++.+.++ +|++.| ++-++ -..
T Consensus 242 ~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~-iPvi~~----G~i~~-~~a 315 (376)
T 1icp_A 242 PFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK-GTFIVA----GGYDR-EDG 315 (376)
T ss_dssp TTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC-SCEEEE----SSCCH-HHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC-CCEEEe----CCCCH-HHH
Confidence 21 1235778999999999999999977542 1 1123566777776 687665 23221 123
Q ss_pred HHHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 297 LELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 297 ~eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
+++-+-| +..|.++-.++.-- +....+++|.
T Consensus 316 ~~~l~~g~aD~V~~gR~~l~~P-----~l~~k~~~g~ 347 (376)
T 1icp_A 316 NRALIEDRADLVAYGRLFISNP-----DLPKRFELNA 347 (376)
T ss_dssp HHHHHTTSCSEEEESHHHHHCT-----THHHHHHHTC
T ss_pred HHHHHCCCCcEEeecHHHHhCc-----cHHHHHHcCC
Confidence 4444445 89999887665432 3444555553
No 126
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=96.02 E-value=0.34 Score=46.92 Aligned_cols=77 Identities=18% Similarity=0.060 Sum_probs=47.7
Q ss_pred ccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHH
Q 012815 95 ACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKG 173 (456)
Q Consensus 95 gayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~ 173 (456)
.+.-.-.|+.++++|++++-+- +........| + ......++.++.|++.+++|++++...|+ .+.++.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~----G-~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~------~~~~~~ 95 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMALERVPADIRAQG----G-VARMSDPKIIKEIMAAVSIPVMAKVRIGH------FVEAMI 95 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTT----C-CCCCCCHHHHHHHHTTCSSCEEEEEETTC------HHHHHH
T ss_pred eechHHHHHHHHHCCCcEEEeccccchHHHhhc----C-CccCCCHHHHHHHHHhcCCCeEEEeccCC------HHHHHH
Confidence 3334667788889999999762 1111000111 1 11112234567788888999998765553 456678
Q ss_pred HHHhCccEE
Q 012815 174 YIKAGFAGI 182 (456)
Q Consensus 174 l~~AGaaGI 182 (456)
+.++||++|
T Consensus 96 ~~~aGad~v 104 (297)
T 2zbt_A 96 LEAIGVDFI 104 (297)
T ss_dssp HHHTTCSEE
T ss_pred HHHCCCCEE
Confidence 888999999
No 127
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=96.02 E-value=0.15 Score=51.62 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+++...+.++++.++|..+|+| ++||. +.+..+++|++++++. |+++.| +.|+.....++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKi-------k~g~~------~~~~~~e~v~avR~av---g~d~~l--~vDan~~~~~~~a 223 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKL-------KVGQP------DGALDIARVTAVRKHL---GDAVPL--MVDANQQWDRPTA 223 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE-------ECCCS------CHHHHHHHHHHHHHHH---CTTSCE--EEECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-------ecCCC------CHHHHHHHHHHHHHHc---CCCCEE--EEECCCCCCHHHH
Confidence 6778888999999999999999 23442 3566788888887764 566655 3477777789999
Q ss_pred HHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccchH
Q 012815 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLSL 313 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~l 313 (456)
++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++++ +.| ++.|..-..-
T Consensus 224 ~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~ 291 (393)
T 2og9_A 224 QRMCRIFEPFNLV--WIEEPLDAYDHEGHAALALQFD-TPIATG-----EM--LTSAAEHGDLIRHRAADYLMPDAPR 291 (393)
T ss_dssp HHHHHHHGGGCCS--CEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHHHhhCCC--EEECCCCcccHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHCCCCCEEeeCccc
Confidence 9999999999877 55643 36788899998876 787643 22 23454444 345 6777664443
No 128
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=96.01 E-value=0.058 Score=55.57 Aligned_cols=131 Identities=20% Similarity=0.351 Sum_probs=90.4
Q ss_pred CCcEEEeCCCCC---CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCe
Q 012815 150 SIPVIGDGDNGY---GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI 225 (456)
Q Consensus 150 ~iPVIaD~DtGY---G~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~df 225 (456)
.+|+.+- || +++ +...+.++++.++|..+++| ++|| +.++.+++|++++++. |+++
T Consensus 171 ~vp~~~s---g~~~~~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~-------~~~~d~e~v~avR~av---G~d~ 230 (428)
T 3bjs_A 171 RIPAYAG---GIALGYQPKESLAEEAQEYIARGYKALKL-------RIGD-------AARVDIERVRHVRKVL---GDEV 230 (428)
T ss_dssp CEEEEEE---SSCSCSCCHHHHHHHHHHHHHHTCSEEEE-------ECCS-------CHHHHHHHHHHHHHHH---CTTS
T ss_pred ceeeeee---ccccCCChHHHHHHHHHHHHHCCCCEEEE-------CCCC-------CHHHHHHHHHHHHHhc---CCCC
Confidence 4676653 43 467 88888899999999999998 2455 4566788888887764 5677
Q ss_pred EEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHH---
Q 012815 226 VIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL--- 299 (456)
Q Consensus 226 vIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL--- 299 (456)
.| +.|+.....++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++.+|+..+ +. ..+.+++
T Consensus 231 ~l--~vDan~~~~~~eai~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~~iPIa~d-----E~--~~~~~~~~~~ 299 (428)
T 3bjs_A 231 DI--LTDANTAYTMADARRVLPVLAEIQAG--WLEEPFACNDFASYREVAKITPLVPIAAG-----EN--HYTRFEFGQM 299 (428)
T ss_dssp EE--EEECTTCCCHHHHHHHHHHHHHTTCS--CEECCSCTTCHHHHHHHTTTCSSSCEEEC-----TT--CCSHHHHHHH
T ss_pred EE--EEECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCccCHHHHHHHHHhCCCCcEEcC-----CC--cCCHHHHHHH
Confidence 66 46887777899999999999999877 56653 356788888776542565533 21 2344444
Q ss_pred HhcC-CCEEeccc
Q 012815 300 EELG-FKLVAYPL 311 (456)
Q Consensus 300 ~elG-v~~Vs~p~ 311 (456)
-+.| ++.|..-+
T Consensus 300 i~~~~~d~v~ik~ 312 (428)
T 3bjs_A 300 LDAGAVQVWQPDL 312 (428)
T ss_dssp HTTCCEEEECCBT
T ss_pred HHhCCCCEEEeCc
Confidence 4455 55565533
No 129
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=96.01 E-value=0.3 Score=48.48 Aligned_cols=80 Identities=18% Similarity=0.011 Sum_probs=55.5
Q ss_pred eecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHH
Q 012815 92 QGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRT 170 (456)
Q Consensus 92 v~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rt 170 (456)
+.+-+-++-.|+++|++|+-+|.+- +-.. .. .-..| +..-.=+.+++.|.+++++||++=.--|+ ..-
T Consensus 14 vimdv~~~eqa~iae~aGa~av~~l~~~p~--d~--r~~gG-v~Rm~dp~~I~~I~~aVsIPVm~k~righ------~~E 82 (291)
T 3o07_A 14 VIMDVVTPEQAKIAEKSGACAVMALESIPA--DM--RKSGK-VCRMSDPKMIKDIMNSVSIPVMAKVRIGH------FVE 82 (291)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECSSCHH--HH--HTTTC-CCCCCCHHHHHHHHTTCSSCEEEEEETTC------HHH
T ss_pred eeeecCCHHHHHHHHHhCchhhhhccCCCc--hh--hhcCC-ccccCCHHHHHHHHHhCCCCeEEEEecCc------HHH
Confidence 4567788999999999999988765 2111 00 01112 22222245678899999999999777787 455
Q ss_pred HHHHHHhCccEE
Q 012815 171 VKGYIKAGFAGI 182 (456)
Q Consensus 171 Vk~l~~AGaaGI 182 (456)
++.++++||+-|
T Consensus 83 Aqilea~GaD~I 94 (291)
T 3o07_A 83 AQIIEALEVDYI 94 (291)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 577888999988
No 130
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=95.92 E-value=0.33 Score=49.23 Aligned_cols=128 Identities=16% Similarity=0.234 Sum_probs=92.8
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 159 tGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
.|+++++.+.+.++.+.+.|...+||-- |. +.++-+++|++++++. |+++.+ |.|+.....
T Consensus 138 ~g~~~~e~~~~~a~~~~~~Gf~~~KlK~-------g~-------~~~~d~~~v~avR~a~---g~~~~L--~vDaN~~w~ 198 (379)
T 3r0u_A 138 ISCGNVAETIQNIQNGVEANFTAIKVKT-------GA-------DFNRDIQLLKALDNEF---SKNIKF--RFDANQGWN 198 (379)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCEEEEEC-------SS-------CHHHHHHHHHHHHHHC---CTTSEE--EEECTTCCC
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEeeec-------CC-------CHHHHHHHHHHHHHhc---CCCCeE--EEeCCCCcC
Confidence 3677888888889999999999999932 21 4566788998887764 455544 348888888
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~ 311 (456)
.++|++-++++.+.|.+..|+|-+ .+.+.++++.+..+ +|+..+-. ..+. .++-+.| +..+..-.
T Consensus 199 ~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~-iPIa~dE~-------~~~~~~~~~~i~~~a~d~v~~k~ 270 (379)
T 3r0u_A 199 LAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFSN-IPVVADES-------VFDAKDAERVIDEQACNMINIKL 270 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHCS-SCEEESTT-------CSSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcCC-CCEEeCCc-------cCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999977788999874 25788999998887 78776521 2344 4455555 56665544
Q ss_pred hH
Q 012815 312 SL 313 (456)
Q Consensus 312 ~l 313 (456)
..
T Consensus 271 ~~ 272 (379)
T 3r0u_A 271 AK 272 (379)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 131
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=95.88 E-value=0.069 Score=54.48 Aligned_cols=85 Identities=14% Similarity=0.158 Sum_probs=60.1
Q ss_pred ccCChH--HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHH
Q 012815 95 ACFDAL--SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVK 172 (456)
Q Consensus 95 gayDal--SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk 172 (456)
|++... -.++++..|++++.+--.... -+..|. +..++...++.++.|++.+++||++-. .|||.. .+.++
T Consensus 152 g~~~~~e~~~~~ve~~~adal~ihln~~q--e~~~p~-Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s---~e~A~ 224 (365)
T 3sr7_A 152 GLDKPYQAGLQAVRDLQPLFLQVHINLMQ--ELLMPE-GEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD---VKTIQ 224 (365)
T ss_dssp ETTSCHHHHHHHHHHHCCSCEEEEECHHH--HHTSSS-SCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC---HHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccccc--cccCCC-CCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC---HHHHH
Confidence 555444 377888999999988722211 123443 345566777888999999999999994 688753 34567
Q ss_pred HHHHhCccEEEeCC
Q 012815 173 GYIKAGFAGIILED 186 (456)
Q Consensus 173 ~l~~AGaaGI~IED 186 (456)
.++++||++|.+-.
T Consensus 225 ~l~~aGad~I~V~g 238 (365)
T 3sr7_A 225 TAIDLGVKTVDISG 238 (365)
T ss_dssp HHHHHTCCEEECCC
T ss_pred HHHHcCCCEEEEeC
Confidence 78899999999854
No 132
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.87 E-value=0.11 Score=51.39 Aligned_cols=106 Identities=15% Similarity=0.108 Sum_probs=74.7
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh-cccHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSR 247 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~-~~~ldeAI~Rak 247 (456)
-.++.+.++|+..|-.-|...--..||.+. ..++.+||+...++.+++.. ..+|++=+.--. ..+.+++++-+.
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vTldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~s~~~a~~na~ 102 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKST-LPVSLRDMCYHTECVARGAK----NAMIVSDLPFGAYQQSKEQAFAAAA 102 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCS----SSEEEEECCTTSSSSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHhhCC----CCeEEEECCCCCccCCHHHHHHHHH
Confidence 345678889999998866653234577553 46799999999998887753 234455443211 135799999999
Q ss_pred HhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCcee
Q 012815 248 AFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKM 281 (456)
Q Consensus 248 Ay~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~ 281 (456)
.+.++||++|-+|+- .-.+.++.++++ ++|++
T Consensus 103 rl~kaGa~aVklEdg~e~~~~I~al~~a--gIpV~ 135 (275)
T 1o66_A 103 ELMAAGAHMVKLEGGVWMAETTEFLQMR--GIPVC 135 (275)
T ss_dssp HHHHTTCSEEEEECSGGGHHHHHHHHHT--TCCEE
T ss_pred HHHHcCCcEEEECCcHHHHHHHHHHHHc--CCCeE
Confidence 999999999999985 334566677664 46766
No 133
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=95.86 E-value=0.0064 Score=59.47 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
|.....+.++.+++. ++|+.+ ||+++.-...+.+|..+-++++++ +.-|++=+- ..+.+|+
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~-------rvpviaGvg---~~~t~~a 77 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLV--------YGSNGEGVHLTPEERARGLRALRP-------RKPFLVGLM---EETLPQA 77 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEE--------TCTTTTGGGSCHHHHHHHHHTCCC-------SSCCEEEEC---CSSHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEE--------CCcCcCchhcCHHHHHHHHHHHHh-------CCcEEEeCC---CCCHHHH
Confidence 556788999999999 999887 666776677888888777766655 122333332 2356899
Q ss_pred HHHHHHhHhcCCCEEEeccC----C-CHHHHH----HHHHhCCCCceee-eeeccCCCC-CCCCHHHHHhc
Q 012815 243 LRRSRAFADAGADVLFIDAL----A-SKEEMK----AFCEISPLVPKMA-NMLEGGGKT-PILNPLELEEL 302 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~----~-s~eei~----~i~~~v~~vP~~~-N~~~~~g~t-p~lt~~eL~el 302 (456)
|+.++..+++|||++++-.+ + +.+++. ++++ + +|+++ |+ |+.+ -.++++.+.++
T Consensus 78 i~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~-lPiilYn~---P~~tg~~l~~~~~~~L 142 (283)
T 2pcq_A 78 EGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--K-MPLFLYHV---PQNTKVDLPLEAVEAL 142 (283)
T ss_dssp HHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--H-SCEEEEEC---HHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--C-CCEEEEeC---ccccCcCCCHHHHHHH
Confidence 99999999999999987442 3 444444 3444 3 56543 43 2222 24677766665
No 134
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=95.86 E-value=0.12 Score=52.86 Aligned_cols=137 Identities=12% Similarity=0.165 Sum_probs=89.5
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcc
Q 012815 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL 237 (456)
Q Consensus 159 tGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~ 237 (456)
.++.+++.+.+.++++.+.|..++||--.. ...||.+... .-+.++-+++|++++++. |+++.|.. |+....
T Consensus 147 ~~~~~~e~~~~~a~~~~~~G~~~~KlK~g~--~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~v--Dan~~~ 219 (404)
T 4e5t_A 147 NVYNDADMAAEAAAKAVDQGFTAVKFDPAG--AYTIYDGHQPSLEDLERSEAFCKQIRAAV---GTKADLLF--GTHGQF 219 (404)
T ss_dssp CTTTCHHHHHHHHHHHHHHTCSEEEECCSC--CCBTTCSBCCCHHHHHHHHHHHHHHHHHH---GGGSEEEE--CCCSCB
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEeeCCCC--CCcccccccccHHHHHHHHHHHHHHHHHc---CCCCeEEE--eCCCCc
Confidence 456678889999999999999999994221 0112211111 112566788888888775 45665543 677777
Q ss_pred cHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-CCEEecc
Q 012815 238 SLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYP 310 (456)
Q Consensus 238 ~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v~~Vs~p 310 (456)
.+++|++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.. ++-+.| +..|..-
T Consensus 220 ~~~~A~~~~~~l~~~~i~--~iEeP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~~d 289 (404)
T 4e5t_A 220 TVSGAKRLARRLEAYDPL--WFEEPIPPEKPEDMAEVARYTS-IPVATG-----ER--LCTKYEFSRVLETGAASILQMN 289 (404)
T ss_dssp CHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHHHTCCSEECCC
T ss_pred CHHHHHHHHHHHhhcCCc--EEECCCCcccHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCCCEEecC
Confidence 899999999999999866 45542 26788999999886 787643 21 12343 444445 6666554
Q ss_pred ch
Q 012815 311 LS 312 (456)
Q Consensus 311 ~~ 312 (456)
..
T Consensus 290 ~~ 291 (404)
T 4e5t_A 290 LG 291 (404)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 135
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=95.86 E-value=0.17 Score=50.92 Aligned_cols=127 Identities=16% Similarity=0.144 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
++++...+.++++.++|..+|+|- +|. +.+..+++|++++++. | |+.| |.|+.....+++
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~-------~~~~~~e~v~avr~a~---g-d~~l--~vD~n~~~~~~~ 205 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLK-------VGR-------GEKLDLEITAAVRGEI---G-DARL--RLDANEGWSVHD 205 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHHTTS---T-TCEE--EEECTTCCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC-------cCC-------CHHHHHHHHHHHHHHc---C-CcEE--EEecCCCCCHHH
Confidence 467778888999999999999982 222 4566778888887664 5 6555 458877778999
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccchHH
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLSLI 314 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~ll 314 (456)
+++-++++.++|.+. +|-+ .+.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-..-.
T Consensus 206 a~~~~~~l~~~~i~~--iEqP~~~~~~~~~~~l~~~~~-iPI~~d-----e~--i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 206 AINMCRKLEKYDIEF--IEQPTVSWSIPAMAHVREKVG-IPIVAD-----QA--AFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp HHHHHHHHGGGCCSE--EECCSCTTCHHHHHHHHHHCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHHHhcCCCE--EeCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 999999999999874 5543 36788899998876 787654 22 23444443 344 78887755544
Q ss_pred HHHH
Q 012815 315 GVSV 318 (456)
Q Consensus 315 ~aa~ 318 (456)
.--.
T Consensus 276 GGit 279 (384)
T 2pgw_A 276 GGIQ 279 (384)
T ss_dssp TSHH
T ss_pred CCHH
Confidence 3333
No 136
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.86 E-value=0.098 Score=52.47 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 167 VKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
..+.+++..++|++||.|--.- .| ||...-+| .+... .-..+-|++++++. ++.|..|.-..
T Consensus 146 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~avr~~v-----~~pv~vRls~~ 219 (340)
T 3gr7_A 146 FQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGG-SPENRYRFLGEVIDAVREVW-----DGPLFVRISAS 219 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHC-----CSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccC-CHHHHHHHHHHHHHHHHHhc-----CCceEEEeccc
Confidence 4455677778999999997542 12 33322233 22211 12233444444432 55566665442
Q ss_pred ----hcccHHHHHHHHHHhHhcCCCEEEecc-C---------C--CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH
Q 012815 235 ----QALSLEESLRRSRAFADAGADVLFIDA-L---------A--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (456)
Q Consensus 235 ----~~~~ldeAI~RakAy~eAGAD~Ifie~-~---------~--s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e 298 (456)
....+++.++-++.+.++|+|.|-+.. . + ..+.++++.+.++ +|+..| ++-...-..++
T Consensus 220 ~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~-iPVi~~----GgI~s~e~a~~ 294 (340)
T 3gr7_A 220 DYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD-IPTGAV----GLITSGWQAEE 294 (340)
T ss_dssp CCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT-CCEEEE----SSCCCHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC-CcEEee----CCCCCHHHHHH
Confidence 123568899999999999999998752 1 1 3456778888876 787765 23211112345
Q ss_pred HHhcC-CCEEeccchHHH
Q 012815 299 LEELG-FKLVAYPLSLIG 315 (456)
Q Consensus 299 L~elG-v~~Vs~p~~ll~ 315 (456)
+-+.| +..|.++-.++.
T Consensus 295 ~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 295 ILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HHHTTSCSEEEECHHHHH
T ss_pred HHHCCCeeEEEecHHHHh
Confidence 55567 999999876554
No 137
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.85 E-value=0.3 Score=49.51 Aligned_cols=145 Identities=15% Similarity=0.174 Sum_probs=87.4
Q ss_pred CCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHH
Q 012815 132 FISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRI 211 (456)
Q Consensus 132 ~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI 211 (456)
.++.++..+.++.+.+...+|+.+-. |... .+.++.++++|++.|+|.-. .||. +.+.+.|
T Consensus 77 ~~s~e~~~~~I~~vk~~~~~pvga~i--g~~~----~e~a~~l~eaGad~I~ld~a-----~G~~--------~~~~~~i 137 (361)
T 3khj_A 77 NMDMESQVNEVLKVKNSGGLRVGAAI--GVNE----IERAKLLVEAGVDVIVLDSA-----HGHS--------LNIIRTL 137 (361)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCCEEEE--CTTC----HHHHHHHHHTTCSEEEECCS-----CCSB--------HHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCceEEEEe--CCCH----HHHHHHHHHcCcCeEEEeCC-----CCCc--------HHHHHHH
Confidence 36788888888888877778887765 2222 66778899999999998421 1231 3344555
Q ss_pred HHHHHHhHhhCCCeEEEE-ecchhhcccHHHHHHHHHHhHhcCCCEEEec---------------cCCCHHHHHHHH---
Q 012815 212 KAAVDARKESGSDIVIVA-RTDSRQALSLEESLRRSRAFADAGADVLFID---------------ALASKEEMKAFC--- 272 (456)
Q Consensus 212 ~AA~~Ar~~~G~dfvIiA-RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie---------------~~~s~eei~~i~--- 272 (456)
+.+++.. +..|++ -.. . .+.++.+.++|||.|.+- +.++.+.+.++.
T Consensus 138 ~~i~~~~-----~~~Vivg~v~-----t----~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~ 203 (361)
T 3khj_A 138 KEIKSKM-----NIDVIVGNVV-----T----EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVA 203 (361)
T ss_dssp HHHHHHC-----CCEEEEEEEC-----S----HHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHH
T ss_pred HHHHHhc-----CCcEEEccCC-----C----HHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHH
Confidence 5555442 233333 221 1 245788889999999982 134444444443
Q ss_pred HhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 273 EISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 273 ~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
+.+. +|++.. +|-...-+...+-++|...|..+..++
T Consensus 204 ~~~~-iPVIA~----GGI~~~~di~kala~GAd~V~vGs~~~ 240 (361)
T 3khj_A 204 SKFG-IPIIAD----GGIRYSGDIGKALAVGASSVMIGSILA 240 (361)
T ss_dssp HHHT-CCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTT
T ss_pred hhcC-CeEEEE----CCCCCHHHHHHHHHcCCCEEEEChhhh
Confidence 3344 676543 342111234556678999888877544
No 138
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=95.83 E-value=0.075 Score=53.14 Aligned_cols=126 Identities=14% Similarity=0.174 Sum_probs=88.2
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
|.++++...+.++++.+ +|..+++| ++||. +.++.+++|++++++. |+++.| |.|+.....
T Consensus 139 ~~~~~e~~~~~a~~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~ 200 (370)
T 1nu5_A 139 ASGDTARDIDSALEMIETRRHNRFKV-------KLGAR------TPAQDLEHIRSIVKAV---GDRASV--RVDVNQGWD 200 (370)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCSEEEE-------ECSSS------CHHHHHHHHHHHHHHH---GGGCEE--EEECTTCCC
T ss_pred cCCCHHHHHHHHHHHHHhCCccEEEE-------ecCCC------ChHHHHHHHHHHHHhc---CCCCEE--EEECCCCCC
Confidence 34577778888889998 99999998 24552 3456678888888765 445554 567767778
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.+++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++ +-+.| ++.|..-.
T Consensus 201 ~~~a~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 201 EQTASIWIPRLEEAGVE--LVEQPVPRANFGALRRLTEQNG-VAILAD-----ES--LSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp HHHHHHHHHHHHHHTCC--EEECCSCTTCHHHHHHHHHHCS-SEEEES-----TT--CCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHHhcCcc--eEeCCCCcccHHHHHHHHHhCC-CCEEeC-----CC--CCCHHHHHHHHHhCCCCEEEEch
Confidence 89999999999999877 56653 36788899998876 776643 21 234444 44455 77777754
Q ss_pred hH
Q 012815 312 SL 313 (456)
Q Consensus 312 ~l 313 (456)
.-
T Consensus 271 ~~ 272 (370)
T 1nu5_A 271 CN 272 (370)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 139
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.83 E-value=1.7 Score=43.43 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=138.3
Q ss_pred HHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEE
Q 012815 79 KSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVI 154 (456)
+-|....+.+--+...|+++.-+++.+ ++.+.+.|.-.|-+.. ...| .+.+...++..++ .++||.
T Consensus 7 ~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~-~y~g--------~~~~~~~v~~~a~-~~VPVa 76 (305)
T 1rvg_A 7 EILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAM-KYGG--------RALTLMAVELAKE-ARVPVA 76 (305)
T ss_dssp HHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHHH--------HHHHHHHHHHHHH-CSSCEE
T ss_pred HHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-hhCC--------HHHHHHHHHHHHh-CCCcEE
Confidence 445555555656888999999887765 5568888876654422 1223 3455667777777 889999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE------E
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI------V 228 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI------i 228 (456)
.=.|+|. + .+.+++.+++|...|.|... | .|.||=++.-+..++-++..| ..| +
T Consensus 77 lHlDHg~-~----~e~~~~ai~~GFtSVMiDgS-------~------~p~eENi~~Tk~vv~~ah~~g--vsVEaELG~v 136 (305)
T 1rvg_A 77 VHLDHGS-S----YESVLRALRAGFTSVMIDKS-------H------EDFETNVRETRRVVEAAHAVG--VTVEAELGRL 136 (305)
T ss_dssp EEEEEEC-S----HHHHHHHHHTTCSEEEECCT-------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred EECCCCC-C----HHHHHHHHHcCCCeeeeCCC-------C------CCHHHHHHHHHHHHHHHHHcC--CEEEEEEeec
Confidence 9999984 3 45666778999999999443 3 377888888888887765432 111 1
Q ss_pred Eecc-h------h-hcccHHHHHHHHHHhH-hcCCCEEEec-----cC--------CCHHHHHHHHHhCCCCceeeeeec
Q 012815 229 ARTD-S------R-QALSLEESLRRSRAFA-DAGADVLFID-----AL--------ASKEEMKAFCEISPLVPKMANMLE 286 (456)
Q Consensus 229 ARTD-A------~-~~~~ldeAI~RakAy~-eAGAD~Ifie-----~~--------~s~eei~~i~~~v~~vP~~~N~~~ 286 (456)
+-.+ . . .-..-+| |+.|. +.|+|++-+- |. -+.+.++++.+.+| +|+. ++
T Consensus 137 gg~Ed~~~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-vpLV---lH 208 (305)
T 1rvg_A 137 AGIEEHVAVDEKDALLTNPEE----ARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-APLV---LH 208 (305)
T ss_dssp CCSCC------CCTTCCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-SCEE---EC
T ss_pred cCccCCccccccccccCCHHH----HHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-CCEE---Ee
Confidence 1111 0 0 0023333 44455 4899988652 22 13688999999887 6754 44
Q ss_pred cCC---------------C---CCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012815 287 GGG---------------K---TPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (456)
Q Consensus 287 ~~g---------------~---tp~lt~~eL~---elGv~~Vs~p~~ll~aa~~A~~~~l~ 326 (456)
++. . +-.++.++++ ++|+.-|=+..-+..+.+.++++.+.
T Consensus 209 GgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~ 269 (305)
T 1rvg_A 209 GASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALN 269 (305)
T ss_dssp SCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 422 0 0045666655 79999999999999999999988863
No 140
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=95.83 E-value=0.053 Score=53.12 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=85.6
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHh-------hhhcccCC---CCC-CCHHHHHHHHHHH
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-------AARLALPD---TGF-ISYGEMVDQGQLI 145 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avS-------as~lG~PD---~~~-lt~~Eml~~~r~I 145 (456)
.-+.|++..++-+..++-.+||..++..+++ ..+.+.+++..+- .+.+|.|= .+. .+++|+...+..|
T Consensus 63 GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~-~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~~i 141 (267)
T 2nwr_A 63 GVKALRKVKEEFGLKITTDIHESWQAEPVAE-VADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEKL 141 (267)
T ss_dssp HHHHHHHHHHHHCCEEEEECSSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEecCCHHhHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHH
Confidence 3455777766667888889999999999988 6999999983321 12345543 344 6788888776665
Q ss_pred Hh-------------------------------ccCCcEEEeCCCC------CCC-----HHHHHHHHHHHHHhCccEEE
Q 012815 146 TQ-------------------------------AVSIPVIGDGDNG------YGN-----AMNVKRTVKGYIKAGFAGII 183 (456)
Q Consensus 146 ~r-------------------------------a~~iPVIaD~DtG------YG~-----~~nv~rtVk~l~~AGaaGI~ 183 (456)
.. ..+ ||++|.-++ |++ ..-+...++..+.+||+|+.
T Consensus 142 ~~~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~m 220 (267)
T 2nwr_A 142 KFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMKQWA-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVF 220 (267)
T ss_dssp HHTTCSSEEEEECCEECSSSCEECCTTHHHHHTTTS-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEE
T ss_pred HHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHcC-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEE
Confidence 32 124 999997665 432 22345556677789999999
Q ss_pred eCCCCCCCCccCCCCccccCHHHHHHHHHHHH
Q 012815 184 LEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (456)
Q Consensus 184 IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~ 215 (456)
||--..|.+-- .+|+.-++++++.+-++.++
T Consensus 221 IE~H~~pd~al-~Dg~qsl~p~~l~~l~~~i~ 251 (267)
T 2nwr_A 221 METHPEPEKAL-SDASTQLPLSQLEGIIEAIL 251 (267)
T ss_dssp EEEESCGGGCS-SCTTTCEEGGGHHHHHHHHH
T ss_pred EEecCCcccCC-CccccCCCHHHHHHHHHHHH
Confidence 99765442211 14444445555444444443
No 141
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.79 E-value=0.072 Score=53.79 Aligned_cols=140 Identities=18% Similarity=0.120 Sum_probs=82.5
Q ss_pred HHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCHH-HHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 167 VKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSRE-EAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~e-e~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
..+.+++.+++|++||.|--.- .| +|+..-+| .+-..- -..+-|++++++ .|+||.|.-|....
T Consensus 160 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~a---vg~d~pV~vRis~~ 235 (363)
T 3l5l_A 160 FVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGG-SFDNRSRFLLETLAAVREV---WPENLPLTARFGVL 235 (363)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHTT---SCTTSCEEEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCc-CHHHHHHHHHHHHHHHHHH---cCCCceEEEEecch
Confidence 3455567778999999997531 12 34333233 221111 122333333332 46788777776542
Q ss_pred --h--c-ccHHHHHHHHHHhHhcCCCEEEeccC-------------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH
Q 012815 235 --Q--A-LSLEESLRRSRAFADAGADVLFIDAL-------------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (456)
Q Consensus 235 --~--~-~~ldeAI~RakAy~eAGAD~Ifie~~-------------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~ 296 (456)
. . ..++++++-++.+.++|+|.|-+... ...+.++++.+.+. +|++.| ++-+..-..
T Consensus 236 ~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~----GgI~s~e~a 310 (363)
T 3l5l_A 236 EYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK-LPVTSA----WGFGTPQLA 310 (363)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CCEEEC----SSTTSHHHH
T ss_pred hcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC-CcEEEe----CCCCCHHHH
Confidence 1 1 35789999999999999999876531 13456677777775 787654 231111123
Q ss_pred HHHHhcC-CCEEeccchHHH
Q 012815 297 LELEELG-FKLVAYPLSLIG 315 (456)
Q Consensus 297 ~eL~elG-v~~Vs~p~~ll~ 315 (456)
+++-+.| +..|.++-.++.
T Consensus 311 ~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 311 EAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHCCCccEEEecHHHHh
Confidence 4555667 899998876554
No 142
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=95.77 E-value=0.035 Score=59.36 Aligned_cols=93 Identities=15% Similarity=0.116 Sum_probs=70.0
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHh----CCCCceeeeeeccCCCCCCCC-------HHHHHhcCC
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI----SPLVPKMANMLEGGGKTPILN-------PLELEELGF 304 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~----v~~vP~~~N~~~~~g~tp~lt-------~~eL~elGv 304 (456)
.+++.+|.|+.+|+. +||+||+|.- |+.+++++|++. +|..-+..|....-.-.-.++ ..||.++||
T Consensus 373 ~g~~~ai~r~~a~ap-~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~~LaYN~SPSFnW~~~~~d~~~~~f~~~l~~~G~ 451 (538)
T 1dqu_A 373 GGTQCAINRAVAYAP-FADLIWMESKLPDYKQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPRDEQETYIKRLGALGY 451 (538)
T ss_dssp CSHHHHHHHHHHHTT-SCSEEECCCSSCCHHHHHHHHHHHHHHCTTCEEEEECCSSSCGGGTSCHHHHHSHHHHHHHHTE
T ss_pred CchHHHHHHhcccCc-ccceEEeccCCCCHHHHHHHHHHHHHhCCCceEEecCCcchhhhhhCCHHHHHHHHHHHHhcCc
Confidence 578999999999976 7999999974 888888888864 665445566432100000122 278999999
Q ss_pred CEEeccchHHHHHHHHHHHHHHHHHc
Q 012815 305 KLVAYPLSLIGVSVRAMQDALTAIKG 330 (456)
Q Consensus 305 ~~Vs~p~~ll~aa~~A~~~~l~~i~~ 330 (456)
+.-.+....+...-.++.+.++.+++
T Consensus 452 ~~qfItLag~H~~~~~~~~la~~~~~ 477 (538)
T 1dqu_A 452 AWQFITLAGLHTTALISDTFAKAYAK 477 (538)
T ss_dssp EEEEETTHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEehhhhhhhhHHHHHHHHHHHH
Confidence 99999999998888888888888865
No 143
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=95.72 E-value=0.12 Score=52.51 Aligned_cols=132 Identities=15% Similarity=0.210 Sum_probs=90.9
Q ss_pred CcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 151 IPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 151 iPVIaD~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
+|+-+-. .| .++++.+.+.++++.+.|...++|- .|+ +.++-+++|++++++. |+++.|
T Consensus 139 v~~y~~~-~~~~~~~e~~~~~a~~~~~~G~~~iKiK-------vG~-------~~~~d~~~v~avR~a~---g~d~~l-- 198 (389)
T 3ozy_A 139 VRAYASS-IYWDLTPDQAADELAGWVEQGFTAAKLK-------VGR-------APRKDAANLRAMRQRV---GADVEI-- 198 (389)
T ss_dssp EEEEEEE-ECSSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHH---CTTSEE--
T ss_pred eeeEEec-CCCCCCHHHHHHHHHHHHHCCCCEEeec-------cCC-------CHHHHHHHHHHHHHHc---CCCceE--
Confidence 5654422 04 3567889999999999999999993 233 4577788998888764 567766
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHH-HhCCCCceeeeeeccCCCCCCCCHHH---HHhc
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFC-EISPLVPKMANMLEGGGKTPILNPLE---LEEL 302 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~-~~v~~vP~~~N~~~~~g~tp~lt~~e---L~el 302 (456)
+.|+......++|++-++++.++|.+. +|-+ .+.+.++++. +.++ +|+..+ +. ..+..+ +-+.
T Consensus 199 ~vDan~~~~~~~A~~~~~~l~~~~i~~--iEqP~~~~d~~~~~~l~~~~~~-iPIa~d-----E~--i~~~~~~~~~i~~ 268 (389)
T 3ozy_A 199 LVDANQSLGRHDALAMLRILDEAGCYW--FEEPLSIDDIEGHRILRAQGTP-VRIATG-----EN--LYTRNAFNDYIRN 268 (389)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCSE--EESCSCTTCHHHHHHHHTTCCS-SEEEEC-----TT--CCHHHHHHHHHHT
T ss_pred EEECCCCcCHHHHHHHHHHHHhcCCCE--EECCCCcccHHHHHHHHhcCCC-CCEEeC-----CC--CCCHHHHHHHHHc
Confidence 457777778999999999999998664 4543 2677888998 7766 676643 21 234444 3344
Q ss_pred C-CCEEeccch
Q 012815 303 G-FKLVAYPLS 312 (456)
Q Consensus 303 G-v~~Vs~p~~ 312 (456)
| +..|..-..
T Consensus 269 ~~~d~v~ik~~ 279 (389)
T 3ozy_A 269 DAIDVLQADAS 279 (389)
T ss_dssp TCCSEECCCTT
T ss_pred CCCCEEEeCcc
Confidence 5 666666444
No 144
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.71 E-value=0.051 Score=52.98 Aligned_cols=156 Identities=11% Similarity=0.057 Sum_probs=89.1
Q ss_pred HHHHHHHHhCCc-EEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 100 LSAKLVEKSGFS-FCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 100 lSArl~e~aGfd-AI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
-.|+.++++||| +|-+. |... ..|..+. .-+.+.+.+.+++|.+.+++||++=+-.++ +..++.+.++.++++
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~---~~g~~~~-g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPN---VPGEPQL-AYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCC---SSSCCCG-GGCHHHHHHHHHHHTTTCCSCEEEEECCCC-SHHHHHHHHHHHTTS
T ss_pred HHHHHHHhcCCCeEEEEeccCCC---CCCcccc-cCCHHHHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHHc
Confidence 346667788999 88775 2111 1232222 125666777888888888999998765444 556778888999999
Q ss_pred CccEEEeCCCCC------C--C---------CccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 178 GFAGIILEDQVS------P--K---------GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 178 GaaGI~IEDq~~------p--K---------~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|+++|.+-+... + . ..|+. |..+.|. ..+.++.++++ .++++-|++=-+-...
T Consensus 185 G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~s-g~~~~~~--~~~~i~~v~~~---~~~~ipvi~~GGI~~~---- 254 (311)
T 1jub_A 185 PLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIG-GAYIKPT--ALANVRAFYTR---LKPEIQIIGTGGIETG---- 254 (311)
T ss_dssp CCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-SGGGHHH--HHHHHHHHHTT---SCTTSEEEEESSCCSH----
T ss_pred CCcEEEecCCCCcCceeccCCCCcccccCCCCCccc-cccccHH--HHHHHHHHHHh---cCCCCCEEEECCCCCH----
Confidence 999999876431 0 0 01221 3333332 12333333322 2235556655444322
Q ss_pred HHHHHHHHhHhcCCCEEEecc--C-CCHHHHHHHHH
Q 012815 241 ESLRRSRAFADAGADVLFIDA--L-ASKEEMKAFCE 273 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~--~-~s~eei~~i~~ 273 (456)
+.+..+.++|||+|.+-. + .++..++++.+
T Consensus 255 ---~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~ 287 (311)
T 1jub_A 255 ---QDAFEHLLCGATMLQIGTALHKEGPAIFDRIIK 287 (311)
T ss_dssp ---HHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHH
T ss_pred ---HHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHH
Confidence 335555578999998853 1 13344444444
No 145
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=95.66 E-value=0.24 Score=50.28 Aligned_cols=123 Identities=19% Similarity=0.174 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
++....+.++++.++|..+++|- +||. +.++.+++|++++++. |+++.| +.|+.....++++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~d~e~v~avR~av---G~d~~l--~vDan~~~~~~~a 236 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLK-------VGQP------NCAEDIRRLTAVREAL---GDEFPL--MVDANQQWDRETA 236 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE-------CCCS------CHHHHHHHHHHHHHHH---CSSSCE--EEECTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEe-------cCCC------CHHHHHHHHHHHHHHc---CCCCeE--EEECCCCCCHHHH
Confidence 67788888899999999999992 3441 3466778888887764 566655 4477777789999
Q ss_pred HHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccchH
Q 012815 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLSL 313 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~l 313 (456)
++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++++ +.| ++.|..-..-
T Consensus 237 i~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~ 304 (398)
T 2pp0_A 237 IRMGRKMEQFNLI--WIEEPLDAYDIEGHAQLAAALD-TPIATG-----EM--LTSFREHEQLILGNASDFVQPDAPR 304 (398)
T ss_dssp HHHHHHHGGGTCS--CEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred HHHHHHHHHcCCc--eeeCCCChhhHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEEeCccc
Confidence 9999999999877 56653 36788899998876 777643 21 23554444 345 6777664443
No 146
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.65 E-value=0.31 Score=47.76 Aligned_cols=171 Identities=20% Similarity=0.084 Sum_probs=100.7
Q ss_pred cCChH-HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012815 96 CFDAL-SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (456)
Q Consensus 96 ayDal-SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l 174 (456)
-+|+. -|+..+++|+++|-+ +-.|+.-.=+++ ..+.|++.+++||+.- |+ .=++.++ .+.
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsV---------ltd~~~f~Gs~~----~L~~ir~~v~lPVl~K-df-i~d~~qi----~ea 138 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSV---------LTDTPSFQGAPE----FLTAARQACSLPALRK-DF-LFDPYQV----YEA 138 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEE---------ECCSTTTCCCHH----HHHHHHHTSSSCEEEE-SC-CCSTHHH----HHH
T ss_pred CCCHHHHHHHHHHCCCCEEEE---------eccccccCCCHH----HHHHHHHhcCCCEEEC-Cc-cCCHHHH----HHH
Confidence 35665 688899999998843 222221111333 3466778889999853 22 1244444 456
Q ss_pred HHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012815 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGA 254 (456)
..+||++|.|--. ..+.++. +...+..+++|-+.++-..| .+| +....++|+
T Consensus 139 ~~~GAD~VlLi~a-------------~L~~~~l----~~l~~~a~~lGl~~lvevh~-------~eE----l~~A~~~ga 190 (272)
T 3tsm_A 139 RSWGADCILIIMA-------------SVDDDLA----KELEDTAFALGMDALIEVHD-------EAE----MERALKLSS 190 (272)
T ss_dssp HHTTCSEEEEETT-------------TSCHHHH----HHHHHHHHHTTCEEEEEECS-------HHH----HHHHTTSCC
T ss_pred HHcCCCEEEEccc-------------ccCHHHH----HHHHHHHHHcCCeEEEEeCC-------HHH----HHHHHhcCC
Confidence 6899999999332 2243333 33333344455444443332 233 344457999
Q ss_pred CEEEeccC------CCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012815 255 DVLFIDAL------ASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 255 D~Ifie~~------~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa 317 (456)
|.|=+... .+.+...++++.+|. +|+ +.++|-.+| =...++.++|+.-|..|.+++++.
T Consensus 191 ~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~v---IaesGI~t~-edv~~l~~~Ga~gvLVG~almr~~ 256 (272)
T 3tsm_A 191 RLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLL---VGESGIFTH-EDCLRLEKSGIGTFLIGESLMRQH 256 (272)
T ss_dssp SEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEE---EEESSCCSH-HHHHHHHTTTCCEEEECHHHHTSS
T ss_pred CEEEECCCCCccCCCChHHHHHHHHhCCCCCcE---EEECCCCCH-HHHHHHHHcCCCEEEEcHHHcCCc
Confidence 99977642 356778888888762 333 334432221 223567788999999999988763
No 147
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=95.55 E-value=0.058 Score=54.61 Aligned_cols=129 Identities=16% Similarity=0.267 Sum_probs=91.0
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...++|- +|. +.++-+++|++++++. |+++.| +.|+......
T Consensus 142 ~~~~~e~~~~~a~~~~~~G~~~iKiK-------~G~-------~~~~d~~~v~avR~a~---g~~~~l--~vDan~~~~~ 202 (378)
T 3eez_A 142 GAKSVEETRAVIDRYRQRGYVAHSVK-------IGG-------DVERDIARIRDVEDIR---EPGEIV--LYDVNRGWTR 202 (378)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHTTSC---CTTCEE--EEECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEEec-------cCC-------CHHHHHHHHHHHHHHc---CCCceE--EEECCCCCCH
Confidence 44578888999999999999999993 232 4566788888876654 567666 4577777889
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-CCEEeccchHH
Q 012815 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPLSLI 314 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v~~Vs~p~~ll 314 (456)
++|++.++++.+.|. |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.. ++-+.| +..|..-..-.
T Consensus 203 ~~a~~~~~~l~~~~i---~iEqP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~ik~~~~ 271 (378)
T 3eez_A 203 QQALRVMRATEDLHV---MFEQPGETLDDIAAIRPLHS-APVSVD-----EC--LVTLQDAARVARDGLAEVFGIKLNRV 271 (378)
T ss_dssp HHHHHHHHHTGGGTC---CEECCSSSHHHHHHTGGGCC-CCEEEC-----TT--CCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred HHHHHHHHHhccCCe---EEecCCCCHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCCEEEeCchhc
Confidence 999999999999873 77763 57788888888876 787654 21 23444 444455 77776655544
Q ss_pred HHHH
Q 012815 315 GVSV 318 (456)
Q Consensus 315 ~aa~ 318 (456)
.--.
T Consensus 272 GGit 275 (378)
T 3eez_A 272 GGLT 275 (378)
T ss_dssp TSHH
T ss_pred CCHH
Confidence 3333
No 148
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.55 E-value=0.15 Score=49.77 Aligned_cols=180 Identities=17% Similarity=0.190 Sum_probs=102.4
Q ss_pred CChH-HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCC-CHHHHHHHHHHH
Q 012815 97 FDAL-SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYG-NAMNVKRTVKGY 174 (456)
Q Consensus 97 yDal-SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG-~~~nv~rtVk~l 174 (456)
+|+. -|+..++.|+.+|-+-- .++ -+.--++..+.|++.+++||+.- | |. ++.++ ...
T Consensus 72 ~~p~~~A~~y~~~GA~~isvlt---------d~~----~f~Gs~~~l~~ir~~v~lPvl~k-d--fiid~~qv----~~A 131 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVT---------EQR----RFQGSLDDLDAVRASVSIPVLRK-D--FVVQPYQI----HEA 131 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEEC---------CGG----GHHHHHHHHHHHHHHCSSCEEEE-S--CCCSHHHH----HHH
T ss_pred CCHHHHHHHHHHcCCCEEEEec---------Chh----hcCCCHHHHHHHHHhCCCCEEEC-c--cccCHHHH----HHH
Confidence 3443 67888889998885421 000 01111235566777789999953 3 43 44344 455
Q ss_pred HHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012815 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGA 254 (456)
.++||+||+|=+.. .+.++..+-+. ..++.|-+.++-.. ..+| ++++. ++||
T Consensus 132 ~~~GAD~VlLi~a~-------------l~~~~l~~l~~----~a~~lGl~~lvev~-------t~ee-~~~A~---~~Ga 183 (272)
T 3qja_A 132 RAHGADMLLLIVAA-------------LEQSVLVSMLD----RTESLGMTALVEVH-------TEQE-ADRAL---KAGA 183 (272)
T ss_dssp HHTTCSEEEEEGGG-------------SCHHHHHHHHH----HHHHTTCEEEEEES-------SHHH-HHHHH---HHTC
T ss_pred HHcCCCEEEEeccc-------------CCHHHHHHHHH----HHHHCCCcEEEEcC-------CHHH-HHHHH---HCCC
Confidence 57999999994432 23333322233 33334555444332 2333 34443 6799
Q ss_pred CEEEeccC------CCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHH
Q 012815 255 DVLFIDAL------ASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTA 327 (456)
Q Consensus 255 D~Ifie~~------~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~ 327 (456)
|.|-+... .+.+.++++.+.+| .+|++ .++ |-...-+..++.++|+.-|+.|..++++. -...+++.
T Consensus 184 d~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvV---aeg-GI~t~edv~~l~~~GadgvlVGsal~~a~--dp~~~~~~ 257 (272)
T 3qja_A 184 KVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRI---AES-GVRGTADLLAYAGAGADAVLVGEGLVTSG--DPRAAVAD 257 (272)
T ss_dssp SEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEE---EES-CCCSHHHHHHHHHTTCSEEEECHHHHTCS--CHHHHHHH
T ss_pred CEEEECCCcccccccCHHHHHHHHHhCcccCEEE---EEC-CCCCHHHHHHHHHcCCCEEEEcHHHhCCC--CHHHHHHH
Confidence 99988652 24567788887775 34443 233 42211234668889999999999887654 23344555
Q ss_pred HHc
Q 012815 328 IKG 330 (456)
Q Consensus 328 i~~ 330 (456)
+.+
T Consensus 258 l~~ 260 (272)
T 3qja_A 258 LVT 260 (272)
T ss_dssp HHT
T ss_pred HHh
Confidence 544
No 149
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.54 E-value=0.076 Score=51.33 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=92.7
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
+.+.++++|.+++-++- --+ |....+++.+++.++. ...|++... .||-+.+..++.++...++|.+
T Consensus 28 ~~~~l~~~Gad~ielg~-pr~-------~~~g~~~~~~~~~l~~----~~~~~~pn~-~~~~~~~~~~~f~~~a~~agg~ 94 (264)
T 1xm3_A 28 QKEAVAVSESDILTFAV-RRM-------NIFEASQPNFLEQLDL----SKYTLLPNT-AGASTAEEAVRIARLAKASGLC 94 (264)
T ss_dssp HHHHHHHHTCSEEEEET-TSS-------TTC-------CTTCCG----GGSEEEEEC-TTCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEEcc-ccc-------ccCCCCHHHHHHHHHh----cCCeEcCCc-cccCCHHHHHHHHHHHHHcCCC
Confidence 45677888999997662 111 2112345555554432 346666555 3666777766777777787655
Q ss_pred EE-EeCCCCCCCCccCCCCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEE
Q 012815 181 GI-ILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLF 258 (456)
Q Consensus 181 GI-~IEDq~~pK~CGH~~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~If 258 (456)
++ ++|--. +... +-..++.+ +++++.. ++++.++.-+-. . .+|+++..++|+|.|+
T Consensus 95 ~~i~l~i~~--------d~~~~~~e~~~~~---~~a~~~~---~~g~~vi~~~~~----~----~~~a~~~~~~gad~v~ 152 (264)
T 1xm3_A 95 DMIKVEVIG--------CSRSLLPDPVETL---KASEQLL---EEGFIVLPYTSD----D----VVLARKLEELGVHAIM 152 (264)
T ss_dssp SSEEECCBC--------CTTTCCBCHHHHH---HHHHHHH---HTTCCEEEEECS----C----HHHHHHHHHHTCSCBE
T ss_pred CeEEEeecC--------CCcccccchHHHH---HHHHHHH---CCCeEEEEEcCC----C----HHHHHHHHHhCCCEEE
Confidence 54 443211 1011 11223333 3333322 234444422111 1 2467888899999985
Q ss_pred ecc--------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 259 IDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 259 ie~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
.-+ +.+.+.++++.+..+ +|+.+ .+ |-...-+..++.++|+.-|+.+..++.
T Consensus 153 ~~~~~~Gt~~~~~~~~~l~~i~~~~~-iPviv---~g-GI~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 153 PGASPIGSGQGILNPLNLSFIIEQAK-VPVIV---DA-GIGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp ECSSSTTCCCCCSCHHHHHHHHHHCS-SCBEE---ES-CCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred ECCcccCCCCCCCCHHHHHHHHhcCC-CCEEE---Ee-CCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 511 234667777777554 67643 22 321112357778899999999998764
No 150
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.53 E-value=0.038 Score=55.14 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=92.5
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhh-------hhcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-------s~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.++|..++..+++. .|.+.+++..+-. +.+|.|= .+. .+++|+...++.
T Consensus 99 ~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~ 177 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAK 177 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 344567777766678888899999999999888 9999999843211 1356553 344 688888887776
Q ss_pred HHh-------------------------------ccCCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCccEE
Q 012815 145 ITQ-------------------------------AVSIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 145 I~r-------------------------------a~~iPVIaD~DtG-----------YG~~~nv~rtVk~l~~AGaaGI 182 (456)
|.. .+++||++|.+.. -|..+-+....+..+.+||+|+
T Consensus 178 i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl 257 (298)
T 3fs2_A 178 ITESGNPNVLATERGVSFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGF 257 (298)
T ss_dssp HHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEE
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEE
Confidence 642 1568999997664 2434445666777888999999
Q ss_pred EeCCCCCCCCccCCCCccccCHHH---HHHHHHHHHHH
Q 012815 183 ILEDQVSPKGCGHTRGRKVVSREE---AVMRIKAAVDA 217 (456)
Q Consensus 183 ~IEDq~~pK~CGH~~gk~lvp~ee---~v~kI~AA~~A 217 (456)
.||=-..|.+- -.+++.-++++| +++.|+.+.++
T Consensus 258 ~IE~H~tpd~a-l~D~~~sl~p~el~~lv~~ir~i~~a 294 (298)
T 3fs2_A 258 FIETHEDPDNA-PSDGPNMVPIDKMPALLEKLMAFDRI 294 (298)
T ss_dssp EEEEESSGGGC-SSSGGGCEEGGGHHHHHHHHHHHHHH
T ss_pred EEEecCChhcc-CCchhhcCCHHHHHHHHHHHHHHHHH
Confidence 99986655321 125554444444 45555544433
No 151
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.51 E-value=1.8 Score=42.94 Aligned_cols=182 Identities=20% Similarity=0.185 Sum_probs=106.2
Q ss_pred ceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE-----eCCCCCCC
Q 012815 90 VHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-----DGDNGYGN 163 (456)
Q Consensus 90 ~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa-----D~DtGYG~ 163 (456)
.+.=.+|.+.-+|..+++.|.+-|=+- ++. . .++.+--.++ +.+.+.+++||.+ +.|+=|.+
T Consensus 40 ~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~-------~--GGlTPS~g~i---~~a~~~~~ipV~vMIRPRgGdF~Ys~ 107 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAERGGADRIELCSGLS-------E--GGTTPSMGVL---QVVKQSVQIPVFVMIRPRGGDFLYSD 107 (287)
T ss_dssp SEEEEEESSHHHHHHHHHHTCSEEEECBCGG-------G--TCBCCCHHHH---HHHHTTCCSCEEEECCSSSSCSCCCH
T ss_pred ceEEEEeCCHHHHHHHHHhCCCEEEECCCCC-------C--CCCCCCHHHH---HHHHHhcCCCeEEEEecCCCCcccCH
Confidence 445558999999999999999988765 222 1 1222222333 3344556788775 55666875
Q ss_pred H--HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec-chhhcccHH
Q 012815 164 A--MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLE 240 (456)
Q Consensus 164 ~--~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART-DA~~~~~ld 240 (456)
. ....+-++.+.++||+||++= ...+ -|+ ++.+-+ +...++...+ + +..=|- |.. .+..
T Consensus 108 ~E~~~M~~dI~~~~~~GAdGvVfG-~L~~--dg~------iD~~~~----~~Li~~a~~l--~-vTFHRAFD~~--~d~~ 169 (287)
T 3iwp_A 108 REIEVMKADIRLAKLYGADGLVFG-ALTE--DGH------IDKELC----MSLMAICRPL--P-VTFHRAFDMV--HDPM 169 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEC-CBCT--TSC------BCHHHH----HHHHHHHTTS--C-EEECGGGGGC--SCHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEe-eeCC--CCC------cCHHHH----HHHHHHcCCC--c-EEEECchhcc--CCHH
Confidence 3 346678899999999999993 1111 122 344433 3333333322 2 223333 321 2345
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh-cCCCEEe
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE-LGFKLVA 308 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e-lGv~~Vs 308 (456)
+|++....| |.|-|+..+- ...+.++++.+...+ . +.++.++|-++ -...+|.+ .|++-+=
T Consensus 170 ~Ale~Li~l---GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~-r--I~ImaGGGV~~-~Ni~~l~~~tG~~~~H 236 (287)
T 3iwp_A 170 AALETLLTL---GFERVLTSGCDSSALEGLPLIKRLIEQAKG-R--IVVMPGGGITD-RNLQRILEGSGATEFH 236 (287)
T ss_dssp HHHHHHHHH---TCSEEEECTTSSSTTTTHHHHHHHHHHHTT-S--SEEEECTTCCT-TTHHHHHHHHCCSEEE
T ss_pred HHHHHHHHc---CCCEEECCCCCCChHHhHHHHHHHHHHhCC-C--CEEEECCCcCH-HHHHHHHHhhCCCEEe
Confidence 667665555 9999998762 345677887775432 1 23445555443 45677654 8887653
No 152
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.50 E-value=0.11 Score=51.15 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=79.2
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
-+++.+.++|+..|..-|...--..||.+. ..++.+||+...++.+++. ++..|++=-+.-.=.+.+++++-+..
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vtldem~~h~~aV~r~~----~~~~vvaD~pfgsY~s~~~a~~~a~r 114 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSLGNVLQGQTTT-LPVTLDDIAYHTACVARAQ----PRALIVADLPFGTYGTPADAFASAVK 114 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHTC----CSSEEEEECCTTSCSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHcCCCCC-CccCHHHHHHHHHHHHhcC----CCCCEEEecCCCCCCCHHHHHHHHHH
Confidence 344678889999998877753334577553 3688999999999887764 24667776664211577899999999
Q ss_pred hHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeee
Q 012815 249 FADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 249 y~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N 283 (456)
+.++||++|-+|+- ...+.++++++. ++|++-.
T Consensus 115 l~kaGa~aVklEdg~~~~~~i~~l~~~--GIpv~gH 148 (275)
T 3vav_A 115 LMRAGAQMVKFEGGEWLAETVRFLVER--AVPVCAH 148 (275)
T ss_dssp HHHTTCSEEEEECCGGGHHHHHHHHHT--TCCEEEE
T ss_pred HHHcCCCEEEECCchhHHHHHHHHHHC--CCCEEEe
Confidence 99999999999974 345677888775 4777643
No 153
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=95.49 E-value=0.08 Score=53.23 Aligned_cols=126 Identities=12% Similarity=0.095 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++...+.++++.++|..+++|- +||. +.++.+++|++++++. |+++.+ |.|+......
T Consensus 142 ~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~~ 203 (378)
T 2qdd_A 142 STGTPDQMLGLIAEAAAQGYRTHSAK-------IGGS------DPAQDIARIEAISAGL---PDGHRV--TFDVNRAWTP 203 (378)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEEE-------CCSS------CHHHHHHHHHHHHHSC---CTTCEE--EEECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHHHhhhheeec-------CCCC------ChHHHHHHHHHHHHHh---CCCCEE--EEeCCCCCCH
Confidence 44577888888999999999999982 3542 3566788888887764 566665 5677777788
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccchHH
Q 012815 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLSLI 314 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~ll 314 (456)
+++++-++++. +| . |+|-+ ++.+.++++.+.++ +|+..+ +. ..+.+++. +.| ++.|..-....
T Consensus 204 ~~a~~~~~~l~-~~--i-~iEqP~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (378)
T 2qdd_A 204 AIAVEVLNSVR-AR--D-WIEQPCQTLDQCAHVARRVA-NPIMLD-----EC--LHEFSDHLAAWSRGACEGVKIKPNRV 271 (378)
T ss_dssp HHHHHHHTSCC-CC--C-EEECCSSSHHHHHHHHTTCC-SCEEEC-----TT--CCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHHHHhC-CC--c-EEEcCCCCHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHhCCCCEEEeccccc
Confidence 99999999996 55 4 78763 47888999988876 777643 21 23444443 334 77777755543
Q ss_pred H
Q 012815 315 G 315 (456)
Q Consensus 315 ~ 315 (456)
.
T Consensus 272 G 272 (378)
T 2qdd_A 272 G 272 (378)
T ss_dssp T
T ss_pred C
Confidence 3
No 154
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.48 E-value=0.067 Score=52.58 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=98.3
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhh-------hcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas-------~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..++..+++. .+.+.++|.-+-.. .+|.|= ++. .|++|+...+..
T Consensus 89 ~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~ 167 (276)
T 1vs1_A 89 EGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEY 167 (276)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHH
Confidence 445567777777778888899999999999999 99999997654321 246653 355 488888887776
Q ss_pred HHh----------------------------------ccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012815 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (456)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~p 190 (456)
|.. ..++||++|.+++-|...-+.......+.+||.|+.||=-..|
T Consensus 168 i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~ 247 (276)
T 1vs1_A 168 ILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNP 247 (276)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSG
T ss_pred HHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCc
Confidence 632 2479999999998775433333334456799999999987655
Q ss_pred CCccCCCCccccCHHHHHHHHHHHHH
Q 012815 191 KGCGHTRGRKVVSREEAVMRIKAAVD 216 (456)
Q Consensus 191 K~CGH~~gk~lvp~ee~v~kI~AA~~ 216 (456)
.+-- .+|+.-++++++.+-++.++.
T Consensus 248 d~a~-~D~~~sl~p~~~~~lv~~i~~ 272 (276)
T 1vs1_A 248 EEAL-SDAKQQLTPGEFARLMGELRW 272 (276)
T ss_dssp GGCS-SCGGGCBCHHHHHHHHHHHHH
T ss_pred ccCC-CchhcCCCHHHHHHHHHHHHH
Confidence 3321 266677788888777766654
No 155
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=95.48 E-value=0.25 Score=45.56 Aligned_cols=142 Identities=13% Similarity=0.088 Sum_probs=92.5
Q ss_pred HHhccCCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCC
Q 012815 145 ITQAVSIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGS 223 (456)
Q Consensus 145 I~ra~~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~ 223 (456)
+.+..+.+++.|.=.+ + +.++.+.++.+.++||+.|.+--.. | .++ |+.++++ +
T Consensus 46 lr~~~~~~v~~D~kl~--DI~~t~~~~v~~~~~~Gad~vtvh~~~---------g------~~~---i~~~~~~----~- 100 (208)
T 2czd_A 46 LKEETGVEIIADLKLA--DIPNTNRLIARKVFGAGADYVIVHTFV---------G------RDS---VMAVKEL----G- 100 (208)
T ss_dssp HHHHHCCEEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEESTT---------C------HHH---HHHHHTT----S-
T ss_pred HHHcCCCEEEEEeeeC--chHHHHHHHHHHHHhcCCCEEEEeccC---------C------HHH---HHHHHHh----C-
Confidence 4443368899998776 4 3567888899999999988662221 1 122 4444433 2
Q ss_pred CeEEEEecchhhcc-c-HHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-CCCHHHHH
Q 012815 224 DIVIVARTDSRQAL-S-LEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELE 300 (456)
Q Consensus 224 dfvIiARTDA~~~~-~-ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~ 300 (456)
+..++..|...... . .+.....++.-.+.|+|.+.+... ..++++++.+..+.-+ ++ +. ||-.+ .-++.++.
T Consensus 101 gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-~~~~i~~lr~~~~~~~-~i--v~-gGI~~~g~~~~~~~ 175 (208)
T 2czd_A 101 EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-RPERIGYIRDRLKEGI-KI--LA-PGIGAQGGKAKDAV 175 (208)
T ss_dssp EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-STHHHHHHHHHSCTTC-EE--EE-CCCCSSTTHHHHHH
T ss_pred CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-ChHHHHHHHHhCCCCe-EE--EE-CCCCCCCCCHHHHH
Confidence 68889988764322 2 445556677788999998865443 3467777777765222 22 33 34443 33578999
Q ss_pred hcCCCEEeccchHHHH
Q 012815 301 ELGFKLVAYPLSLIGV 316 (456)
Q Consensus 301 elGv~~Vs~p~~ll~a 316 (456)
++|.+.+..|...+.+
T Consensus 176 ~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 176 KAGADYIIVGRAIYNA 191 (208)
T ss_dssp HHTCSEEEECHHHHTS
T ss_pred HcCCCEEEEChHHhcC
Confidence 9999999999887764
No 156
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.46 E-value=0.25 Score=47.63 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=90.8
Q ss_pred CHHHHHHH-HHHHHh-ccCCcEEEeCCCCCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCC--CCcc-ccCHHHH
Q 012815 134 SYGEMVDQ-GQLITQ-AVSIPVIGDGDNGYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHT--RGRK-VVSREEA 207 (456)
Q Consensus 134 t~~Eml~~-~r~I~r-a~~iPVIaD~DtGYG~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~--~gk~-lvp~ee~ 207 (456)
+.++++.. .+.+.+ ..+.|+++-.=. +++....+.++.+.+ +|+++|.|.=. |.+. ++.. ..+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~--~~~~~~~~~a~~~~~~~g~d~iei~~~-----~p~~~~g~~~~g~~~~~~ 152 (311)
T 1ep3_A 80 GLEVIMTEKLPWLNENFPELPIIANVAG--SEEADYVAVCAKIGDAANVKAIELNIS-----CPNVKHGGQAFGTDPEVA 152 (311)
T ss_dssp CHHHHHHTHHHHHHHHCTTSCEEEEECC--SSHHHHHHHHHHHTTSTTEEEEEEECC-----SEEGGGTTEEGGGCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCcEEEEEcC--CCHHHHHHHHHHHhccCCCCEEEEeCC-----CCCCCCchhhhcCCHHHH
Confidence 45565543 334444 337898887621 246778888888888 99999977421 2221 0111 1244444
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc--------C-C---------------
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA--------L-A--------------- 263 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~--------~-~--------------- 263 (456)
.+-|++++++. +..+++--+.+. ++..+-++.+.++|+|.|.+.+ . .
T Consensus 153 ~eii~~v~~~~---~~pv~vk~~~~~------~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~ 223 (311)
T 1ep3_A 153 AALVKACKAVS---KVPLYVKLSPNV------TDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP 223 (311)
T ss_dssp HHHHHHHHHHC---SSCEEEEECSCS------SCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG
T ss_pred HHHHHHHHHhc---CCCEEEEECCCh------HHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc
Confidence 45555554432 223333333222 1223447788899999998832 0 0
Q ss_pred -----CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 264 -----SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 264 -----s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
..+.++++.+.+. +|+..+ +|-...-+..++-++|...|.++..++.
T Consensus 224 ~~~~~~~~~i~~i~~~~~-ipvia~----GGI~~~~d~~~~l~~GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 224 AIKPVALKLIHQVAQDVD-IPIIGM----GGVANAQDVLEMYMAGASAVAVGTANFA 275 (311)
T ss_dssp GGHHHHHHHHHHHHTTCS-SCEEEC----SSCCSHHHHHHHHHHTCSEEEECTHHHH
T ss_pred cchHHHHHHHHHHHHhcC-CCEEEE----CCcCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 0256667777664 676643 3422112345566689999999988776
No 157
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.45 E-value=0.093 Score=53.38 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=101.5
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhh-------hcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas-------~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..++..+++. .+.+.+++.-+-.. .+|.|= .+. .|++|+...+..
T Consensus 157 egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~ 235 (350)
T 1vr6_A 157 KGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEY 235 (350)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHH
Confidence 444567777766678888899999999999999 99999997654422 246553 344 488898887776
Q ss_pred HHh----------------------------------ccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC
Q 012815 145 ITQ----------------------------------AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP 190 (456)
Q Consensus 145 I~r----------------------------------a~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~p 190 (456)
|.. .+++||++|.+.+-|...-+.......+.+||.|+.||=-..|
T Consensus 236 i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~p 315 (350)
T 1vr6_A 236 IANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEP 315 (350)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCG
T ss_pred HHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCc
Confidence 632 2478999999988675433333334446789999999987654
Q ss_pred CCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 191 KGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 191 K~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
.+-- .+++.-++++++.+-++.++.....+|
T Consensus 316 d~al-~D~~~sL~p~e~~~lv~~ir~i~~alg 346 (350)
T 1vr6_A 316 EKAL-SDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp GGCS-SCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCC-CchhhcCCHHHHHHHHHHHHHHHHHhC
Confidence 3321 266667788888777777766655555
No 158
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.43 E-value=0.5 Score=47.03 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=81.0
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhC--ccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE
Q 012815 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAG--FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~~nv~rtVk~l~~AG--aaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv 226 (456)
.+.|+.+|. | ...+..+.++.+.++| +..+.|.-. .|+ .....+.|++++++. ++.+
T Consensus 93 ~g~~v~v~~--g--~~~~~~~~a~~~~~~g~~~~~i~i~~~-----~G~--------~~~~~~~i~~lr~~~----~~~~ 151 (336)
T 1ypf_A 93 RGLIASISV--G--VKEDEYEFVQQLAAEHLTPEYITIDIA-----HGH--------SNAVINMIQHIKKHL----PESF 151 (336)
T ss_dssp TTCCCEEEE--C--CSHHHHHHHHHHHHTTCCCSEEEEECS-----SCC--------SHHHHHHHHHHHHHC----TTSE
T ss_pred cCCeEEEeC--C--CCHHHHHHHHHHHhcCCCCCEEEEECC-----CCC--------cHHHHHHHHHHHHhC----CCCE
Confidence 367999993 3 3334556788899999 899877321 121 123344555555443 2234
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCCEEEec--c-------------CC--CHHHHHHHHHhCCCCceeeeeeccCC
Q 012815 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFID--A-------------LA--SKEEMKAFCEISPLVPKMANMLEGGG 289 (456)
Q Consensus 227 IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie--~-------------~~--s~eei~~i~~~v~~vP~~~N~~~~~g 289 (456)
|+.-+ ... .+.|+++.++|||.|.+- + .+ +.+.+.++++.+. +|++.+ +|
T Consensus 152 vi~G~----v~s----~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~-ipVIa~----GG 218 (336)
T 1ypf_A 152 VIAGN----VGT----PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAAS-KPIIAD----GG 218 (336)
T ss_dssp EEEEE----ECS----HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCS-SCEEEE----SC
T ss_pred EEECC----cCC----HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcC-CcEEEe----CC
Confidence 44321 111 356888899999999992 1 12 4667778888774 787654 34
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHH
Q 012815 290 KTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 290 ~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
-...-.....-.+|.+.|..+..++
T Consensus 219 I~~g~Dv~kalalGAdaV~iGr~~l 243 (336)
T 1ypf_A 219 IRTNGDVAKSIRFGATMVMIGSLFA 243 (336)
T ss_dssp CCSTHHHHHHHHTTCSEEEESGGGT
T ss_pred CCCHHHHHHHHHcCCCEEEeChhhh
Confidence 3322345556679999999988776
No 159
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=95.41 E-value=0.21 Score=50.50 Aligned_cols=123 Identities=10% Similarity=0.088 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
+++....+.++++.++|..+++|- +||. +.+..+++|++++++. |+++.|.. |+.....+++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~~~e~v~avR~a~---G~d~~l~v--Dan~~~~~~~ 209 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIY-------PMLD------SLSISIQFVEKVREIV---GDELPLML--DLAVPEDLDQ 209 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEEC-------CCCS------SHHHHHHHHHHHHHHH---CSSSCEEE--ECCCCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEc-------cCCC------hHHHHHHHHHHHHHHh---CCCCEEEE--EcCCCCCHHH
Confidence 357788888899999999999982 3432 2466788888887764 56665553 6666677899
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccch
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPLS 312 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~~ 312 (456)
+++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+. +++-+.| ++.|..-..
T Consensus 210 a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 210 TKSFLKEVSSFNPY--WIEEPVDGENISLLTEIKNTFN-MKVVTG-----EK--QSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp HHHHHHHHGGGCCS--EEECSSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCBTT
T ss_pred HHHHHHHHHhcCCC--eEeCCCChhhHHHHHHHHhhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCEEEECcc
Confidence 99999999999887 45643 36778889998876 777643 21 1344 4444445 777766443
No 160
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.37 E-value=0.67 Score=46.63 Aligned_cols=197 Identities=14% Similarity=0.086 Sum_probs=108.0
Q ss_pred CCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc---CCcE------------------EEe----CCCCCCC
Q 012815 109 GFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV---SIPV------------------IGD----GDNGYGN 163 (456)
Q Consensus 109 GfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~---~iPV------------------IaD----~DtGYG~ 163 (456)
|+-.|.+.+..++....++|..-.+.-++.+..-+++++++ +..+ ++= .+.+|..
T Consensus 50 G~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~ 129 (343)
T 3kru_A 50 GVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKL 129 (343)
T ss_dssp TCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCC
T ss_pred ceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccC
Confidence 66666666666654445667654444566666666665431 1111 110 0111221
Q ss_pred -----HH-------HHHHHHHHHHHhCccEEEeCCC-------C-CC---CCccCCCCccccCH-HHHHHHHHHHHHHhH
Q 012815 164 -----AM-------NVKRTVKGYIKAGFAGIILEDQ-------V-SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARK 219 (456)
Q Consensus 164 -----~~-------nv~rtVk~l~~AGaaGI~IEDq-------~-~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~ 219 (456)
.+ ...+.+++..++|++||.|-.. . .| +|...-+| .+... .-..+-|++++++
T Consensus 130 p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGG-slenR~rf~~eiv~aVr~a-- 206 (343)
T 3kru_A 130 PRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKN-- 206 (343)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHT--
T ss_pred chhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhcc-chHhHHHHHHHHHHHHHhc--
Confidence 12 3345566777899999999732 1 12 23322233 22111 1223334444333
Q ss_pred hhCCCeEEEEecchh----hcccHHHHHHHHHHhHhcCCCEEEec-cC-----------CCHHHHHHHHHhCCCCceeee
Q 012815 220 ESGSDIVIVARTDSR----QALSLEESLRRSRAFADAGADVLFID-AL-----------ASKEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 220 ~~G~dfvIiARTDA~----~~~~ldeAI~RakAy~eAGAD~Ifie-~~-----------~s~eei~~i~~~v~~vP~~~N 283 (456)
.|++|.|..|.-.. ....++++++-++.+.++ +|.|-+. +. ...+.++++.+.++ +|++.|
T Consensus 207 -vg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~ 283 (343)
T 3kru_A 207 -WPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTSAV 283 (343)
T ss_dssp -SCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEEEE
T ss_pred -CCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-ccccee
Confidence 36688888886542 124589999999999999 9999873 21 13456677777776 787765
Q ss_pred eeccCCCCCCCCHHHHHhcC-CCEEeccchHHH
Q 012815 284 MLEGGGKTPILNPLELEELG-FKLVAYPLSLIG 315 (456)
Q Consensus 284 ~~~~~g~tp~lt~~eL~elG-v~~Vs~p~~ll~ 315 (456)
++-+..-..+++-+.| +..|.++-.++.
T Consensus 284 ----Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 284 ----GLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp ----SSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ----eeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 2211101234444456 889988765543
No 161
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.36 E-value=0.76 Score=46.58 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=68.0
Q ss_pred HHHHHhHhcCCCEEEecc---------CCCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 244 RRSRAFADAGADVLFIDA---------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
+.++...++|||+|.+.+ +++.+.+.++.+.++ .+|++++ +|-....+....-.+|.+.|..+..+
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr~~ 316 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGRPV 316 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 557888899999999932 356677888887764 3776654 34222223444455999999999887
Q ss_pred HHHH----HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCcccHHHHHHccc
Q 012815 314 IGVS----VRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYA 362 (456)
Q Consensus 314 l~aa----~~A~~~~l~~i~~g~~~~~~~~~~~~e~~~lvg~~~~~~~e~~y~ 362 (456)
+.+. ...+.+.++.+++. ++....+.|.....++.+...
T Consensus 317 l~~~~~~G~~gv~~~l~~l~~e----------l~~~m~~~G~~~i~~l~~~~l 359 (368)
T 2nli_A 317 LFGLALGGWQGAYSVLDYFQKD----------LTRVMQLTGSQNVEDLKGLDL 359 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHTCSSHHHHHTCCE
T ss_pred HHHHHhcChHHHHHHHHHHHHH----------HHHHHHHhCCcCHHHhccccE
Confidence 7763 23444555555432 456666777777777666544
No 162
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.30 E-value=0.24 Score=49.36 Aligned_cols=159 Identities=14% Similarity=0.021 Sum_probs=90.6
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHH----HHHHHHHHHHhccCCcEEEeCCCC-C---C-C
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYG----EMVDQGQLITQAVSIPVIGDGDNG-Y---G-N 163 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~----Eml~~~r~I~ra~~iPVIaD~DtG-Y---G-~ 163 (456)
-.|+.+.++|||+|=+- ||-+.-. ..-..|.--=+++ -+++.+++|+++++.||.+.+--. | | +
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~ 227 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLD 227 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCC
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCC
Confidence 46788888999999765 3332210 0011221112343 245566777777799999886331 1 2 3
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHH
Q 012815 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESL 243 (456)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI 243 (456)
..+..+.++.++++|++.|++-+..... .....+ +-.. -+++.+|+..+ +..++.+++... .
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-~~~~~~-~~~~-~~~~~~ir~~~------~iPVi~~Ggi~s---------~ 289 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVH-ADINVF-PGYQ-VSFAEKIREQA------DMATGAVGMITD---------G 289 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSC-CCCCCC-TTTT-HHHHHHHHHHH------CCEEEECSSCCS---------H
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcccc-CCCCCC-ccch-HHHHHHHHHHC------CCCEEEECCCCC---------H
Confidence 5678889999999999999997653100 000001 1011 23444544332 234555555422 2
Q ss_pred HHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 244 RRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 244 ~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
+.+..+.+.| ||+|.+-. +.+++..+++.+..+
T Consensus 290 ~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 290 SMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLN 325 (338)
T ss_dssp HHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 4466677788 99998843 445567777776654
No 163
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.26 E-value=0.14 Score=50.20 Aligned_cols=106 Identities=16% Similarity=0.177 Sum_probs=75.5
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
-+++.+.++|+..|-+-|...--..||.+. ..++.+||+...++.+++.. ..+|++=+.--.-.+.+++++-+..
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt-~~vtldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~~~~a~~~a~r 102 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDST-LPVTVADIAYHTAAVRRGAP----NCLLLADLPFMAYATPEQAFENAAT 102 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSS-TTCCHHHHHHHHHHHHHHCT----TSEEEEECCTTSSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCcCHHHHHHHHHHHHhhCC----CCcEEEECCCCCcCCHHHHHHHHHH
Confidence 445678889999999966543234577653 46899999999998887753 2344555543222277999999999
Q ss_pred hHhcCCCEEEeccC-CCHHHHHHHHHhCCCCcee
Q 012815 249 FADAGADVLFIDAL-ASKEEMKAFCEISPLVPKM 281 (456)
Q Consensus 249 y~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~ 281 (456)
+.++||++|-+|+- .-.+.++.++++ ++|++
T Consensus 103 l~kaGa~aVklEgg~e~~~~I~al~~a--gipV~ 134 (264)
T 1m3u_A 103 VMRAGANMVKIEGGEWLVETVQMLTER--AVPVC 134 (264)
T ss_dssp HHHTTCSEEECCCSGGGHHHHHHHHHT--TCCEE
T ss_pred HHHcCCCEEEECCcHHHHHHHHHHHHC--CCCeE
Confidence 99999999999985 334566677664 36765
No 164
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=95.24 E-value=0.56 Score=47.43 Aligned_cols=170 Identities=18% Similarity=0.176 Sum_probs=105.3
Q ss_pred eecccCChHHHHH------HHHhCCcEEEecchHHhhhhcccCCC-CCCCHH---HHHHHHHHHHhcc-CCcEEEeC---
Q 012815 92 QGPACFDALSAKL------VEKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (456)
Q Consensus 92 v~pgayDalSArl------~e~aGfdAI~vSG~avSas~lG~PD~-~~lt~~---Eml~~~r~I~ra~-~iPVIaD~--- 157 (456)
.|||+|=..--++ +.++|.++|.+=|.--. .|.-|. +.-.++ =+...++.|.+.. ++-||.|.
T Consensus 59 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~---~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc 135 (342)
T 1h7n_A 59 SLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLI---PGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLC 135 (342)
T ss_dssp TSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCS---TTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECST
T ss_pred CCCCceeeCHHHHHHHHHHHHHCCCCEEEEecccCc---cCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecc
Confidence 4566654332233 34469998887443110 001111 111111 2456677787776 48888885
Q ss_pred ------------CCCCC-CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 158 ------------DNGYG-NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 158 ------------DtGYG-~~~nv~rt---Vk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
++|+= |...+... +-.+.+|||+-|-=-|- ++| ||.|++++-++.
T Consensus 136 ~YT~HGHcGil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~ 196 (342)
T 1h7n_A 136 EYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDM--------IDG-----------RIRDIKRGLINA 196 (342)
T ss_dssp TTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCC--------CTT-----------HHHHHHHHHHHT
T ss_pred cccCCCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeecccc--------ccc-----------HHHHHHHHHHHC
Confidence 34432 33334444 44556899998876653 444 555666655554
Q ss_pred CC--CeEEEEec------------chhhc--------------ccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHHH
Q 012815 222 GS--DIVIVART------------DSRQA--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFC 272 (456)
Q Consensus 222 G~--dfvIiART------------DA~~~--------------~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~ 272 (456)
|- +.-|.+-+ |+... ..-+||++.+..=.+-|||+|+| |+++-.+-++++.
T Consensus 197 G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk 276 (342)
T 1h7n_A 197 NLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDAS 276 (342)
T ss_dssp TCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHHHH
T ss_pred CCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCccHHHHHHHHH
Confidence 43 57888776 33211 12689999999999999999999 7899999999999
Q ss_pred HhCCCCceeee
Q 012815 273 EISPLVPKMAN 283 (456)
Q Consensus 273 ~~v~~vP~~~N 283 (456)
+.+|.+|+.+=
T Consensus 277 ~~~p~~P~aaY 287 (342)
T 1h7n_A 277 EICKDLPICAY 287 (342)
T ss_dssp HHTTTSCEEEE
T ss_pred HhccCCCeEEE
Confidence 99976888543
No 165
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=95.23 E-value=0.1 Score=52.95 Aligned_cols=126 Identities=13% Similarity=0.153 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
++++.+.+.++++.+.|...++|- +|+ +.++-+++|++++++. |+++.|.- .|+......++
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiK-------vG~-------~~~~d~~~v~avR~a~---g~~~~l~~-vDan~~~~~~~ 202 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLY-------VGK-------NLDADEEFLSRVKEEF---GSRVRIKS-YDFSHLLNWKD 202 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEE-------CSS-------CHHHHHHHHHHHHHHH---GGGCEEEE-EECTTCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe-------eCC-------CHHHHHHHHHHHHHHc---CCCCcEEE-ecCCCCcCHHH
Confidence 456788888999999999999993 333 3567788999888775 44555441 47777788999
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccchHH
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSLI 314 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~~ll 314 (456)
|++.++++.+.|.+..|+|-+ .+.+.++++.+.++ +|+ + |. ..+..+ +-+.| +..|..-..-.
T Consensus 203 A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~-iPI--d--E~-----~~~~~~~~~~~~~~~~d~v~~k~~~~ 272 (391)
T 3gd6_A 203 AHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTD-YPI--S--EH-----VWSFKQQQEMIKKDAIDIFNISPVFI 272 (391)
T ss_dssp HHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCS-SCE--E--EE-----CCCHHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHcC-CCc--C--CC-----CCCHHHHHHHHHcCCCCEEEECchhc
Confidence 999999999999866788864 26788999998876 675 2 21 134444 44445 67776655444
Q ss_pred H
Q 012815 315 G 315 (456)
Q Consensus 315 ~ 315 (456)
.
T Consensus 273 G 273 (391)
T 3gd6_A 273 G 273 (391)
T ss_dssp T
T ss_pred C
Confidence 3
No 166
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.23 E-value=0.5 Score=48.12 Aligned_cols=148 Identities=17% Similarity=0.211 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHH
Q 012815 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIK 212 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~ 212 (456)
++.++..+.++.+.+...+++-+- .|... ...+.++.++++|++.|+|. .. -||. ++..+.|+
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~--vg~~~--~~~~~~~~lieaGvd~I~id-ta----~G~~--------~~~~~~I~ 141 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAA--VGAAP--GNEERVKALVEAGVDVLLID-SS----HGHS--------EGVLQRIR 141 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEE--CCSCT--TCHHHHHHHHHTTCSEEEEE-CS----CTTS--------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEE--eccCh--hHHHHHHHHHhCCCCEEEEe-CC----CCCC--------HHHHHHHH
Confidence 578888888888876543444332 33321 24566788999999999984 21 1232 34555666
Q ss_pred HHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe---cc------------CCCHHHHHHHHH---h
Q 012815 213 AAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI---DA------------LASKEEMKAFCE---I 274 (456)
Q Consensus 213 AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi---e~------------~~s~eei~~i~~---~ 274 (456)
.++++. ++..|++-+=. . .+.++.+.++|||.|.+ ++ .+..+.+.++.+ .
T Consensus 142 ~ik~~~----p~v~Vi~G~v~----t----~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~ 209 (366)
T 4fo4_A 142 ETRAAY----PHLEIIGGNVA----T----AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE 209 (366)
T ss_dssp HHHHHC----TTCEEEEEEEC----S----HHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGG
T ss_pred HHHHhc----CCCceEeeeeC----C----HHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhh
Confidence 655542 45555553211 1 35577888999999998 21 244444555543 3
Q ss_pred CCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 275 SPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 275 v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
+. +|++.. +|-...-.....-++|...|..+..++
T Consensus 210 ~~-iPVIA~----GGI~~~~di~kala~GAd~V~vGs~f~ 244 (366)
T 4fo4_A 210 YG-IPVIAD----GGIRFSGDISKAIAAGASCVMVGSMFA 244 (366)
T ss_dssp GT-CCEEEE----SCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred cC-CeEEEe----CCCCCHHHHHHHHHcCCCEEEEChHhh
Confidence 43 676542 342111234556678999888876543
No 167
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=95.20 E-value=0.11 Score=52.50 Aligned_cols=100 Identities=14% Similarity=0.168 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc-HHHHH
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS-LEESL 243 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~-ldeAI 243 (456)
+.+.+.++++.+.|..+++|- .||.++ +.++-+++|++++++. |+++.|.. |+..... .++|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk-------~g~~g~----~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~d~~~A~ 211 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFG-------GGVMGD----DPDTDYAIVKAVREAA---GPEMEVQI--DLASKWHTCGHSA 211 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEE-------CTTTTS----CHHHHHHHHHHHHHHH---CSSSEEEE--ECTTTTCSHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEec-------cCCCCC----CHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCCHHHHH
Confidence 778888899999999999993 355432 3567788998887764 56766654 6777777 99999
Q ss_pred HHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeee
Q 012815 244 RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N 283 (456)
+.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+
T Consensus 212 ~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d 251 (374)
T 3sjn_A 212 MMAKRLEEFNLN--WIEEPVLADSLISYEKLSRQVS-QKIAGG 251 (374)
T ss_dssp HHHHHSGGGCCS--EEECSSCTTCHHHHHHHHHHCS-SEEEEC
T ss_pred HHHHHhhhcCce--EEECCCCcccHHHHHHHHhhCC-CCEEeC
Confidence 999999999866 55543 26788999998876 777643
No 168
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.18 E-value=0.6 Score=45.87 Aligned_cols=183 Identities=13% Similarity=0.064 Sum_probs=104.4
Q ss_pred HHHHHHhCCCcee---ecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILELPGVHQ---GPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~~~~lv---~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
+|.+++.-.-|++ |.|.-+.--|..+.++|.-.+..++ ...+.+++.+.++.+.+.++.|+.+.
T Consensus 7 ~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~-------------~~~s~~~l~~~i~~i~~~~~~p~~v~ 73 (328)
T 2gjl_A 7 RFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSAL-------------TQPSPEALAAEIARCRELTDRPFGVN 73 (328)
T ss_dssp HHHHHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETT-------------TSSSHHHHHHHHHHHHHHCSSCCEEE
T ss_pred hHHHHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCC-------------CCCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 4666665444543 3466777777788888742222111 01246777777777766555554332
Q ss_pred CCCCCCC----HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 157 GDNGYGN----AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 157 ~DtGYG~----~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
. |.+ .....+.++.+.++|+++|++--. + | .+.+++++. . | ..++...
T Consensus 74 l---~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g-------~-------p-~~~~~~l~~---~----g--i~vi~~v- 125 (328)
T 2gjl_A 74 L---TLLPTQKPVPYAEYRAAIIEAGIRVVETAGN-------D-------P-GEHIAEFRR---H----G--VKVIHKC- 125 (328)
T ss_dssp E---EECCCSSCCCHHHHHHHHHHTTCCEEEEEES-------C-------C-HHHHHHHHH---T----T--CEEEEEE-
T ss_pred E---eccccccCccHHHHHHHHHhcCCCEEEEcCC-------C-------c-HHHHHHHHH---c----C--CCEEeeC-
Confidence 1 111 112345677888899999987321 1 2 344555432 1 2 3333322
Q ss_pred hhhcccHHHHHHHHHHhHhcCCCEEEeccC-----------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh
Q 012815 233 SRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE 301 (456)
Q Consensus 233 A~~~~~ldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e 301 (456)
... +.++...++|||.|.+.+. .+.+.++++.+.++ +|+.+. +|-...-+..++.+
T Consensus 126 ----~t~----~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~-iPviaa----GGI~~~~~v~~al~ 192 (328)
T 2gjl_A 126 ----TAV----RHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLR-VPIIAS----GGFADGRGLVAALA 192 (328)
T ss_dssp ----SSH----HHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCC-SCEEEE----SSCCSHHHHHHHHH
T ss_pred ----CCH----HHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHH
Confidence 122 3355678899999999642 33467777777665 676543 34211123455556
Q ss_pred cCCCEEeccchHHHH
Q 012815 302 LGFKLVAYPLSLIGV 316 (456)
Q Consensus 302 lGv~~Vs~p~~ll~a 316 (456)
+|..-|..+..++..
T Consensus 193 ~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 193 LGADAINMGTRFLAT 207 (328)
T ss_dssp HTCSEEEESHHHHTS
T ss_pred cCCCEEEECHHHHcC
Confidence 899999999877664
No 169
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=95.18 E-value=0.72 Score=47.34 Aligned_cols=146 Identities=16% Similarity=0.183 Sum_probs=95.5
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCC--CccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTR--GRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~--gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
.+|+-+-. .+.++++.+.+.++++.+.|..+++|- +||.. |. -..++-+++|+|++++. |+++-|
T Consensus 167 ~v~~y~s~-~~~~~~e~~~~~a~~~~~~Gf~~iKik-------~g~gp~dg~--~~~~~die~v~avReav---G~d~~L 233 (412)
T 3stp_A 167 RIPVYYSK-LYAGSIEAMQKEAEEAMKGGYKAFKSR-------FGYGPKDGM--PGMRENLKRVEAVREVI---GYDNDL 233 (412)
T ss_dssp SEEEEEEC-CCSCCHHHHHHHHHHHHTTTCSEEEEE-------CCCCGGGHH--HHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred eEEEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEEe-------cccCccccc--chHHHHHHHHHHHHHHc---CCCCeE
Confidence 46766632 112367888899999999999999993 33421 11 12356678888887764 667766
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHh
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEE 301 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~e 301 (456)
.. |+.....+++|++-++++.++|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+. .++-+
T Consensus 234 ~v--DaN~~~~~~~Ai~~~~~Le~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~li~ 301 (412)
T 3stp_A 234 ML--ECYMGWNLDYAKRMLPKLAPYEPR--WLEEPVIADDVAGYAELNAMNI-VPISGG-----EH--EFSVIGCAELIN 301 (412)
T ss_dssp EE--ECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHTCS-SCEEEC-----TT--CCSHHHHHHHHH
T ss_pred EE--ECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHhCCC-CCEEeC-----CC--CCCHHHHHHHHH
Confidence 54 777777899999999999999866 45543 26788999988876 777643 21 2344 44555
Q ss_pred cC-CCEEeccchHHHHHHHH
Q 012815 302 LG-FKLVAYPLSLIGVSVRA 320 (456)
Q Consensus 302 lG-v~~Vs~p~~ll~aa~~A 320 (456)
.| +..|..-..-..-...+
T Consensus 302 ~~a~D~v~ik~~~~GGit~a 321 (412)
T 3stp_A 302 RKAVSVLQYDTNRVGGITAA 321 (412)
T ss_dssp TTCCSEECCCHHHHTHHHHH
T ss_pred cCCCCEEecChhhcCCHHHH
Confidence 56 66665544443333333
No 170
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=95.15 E-value=0.37 Score=49.57 Aligned_cols=135 Identities=19% Similarity=0.263 Sum_probs=90.9
Q ss_pred CCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 150 SIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 150 ~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
.+|+..-.-.+++ +++...+.++++.++|..+++|- +| + +.++-+++|++++++. |+++.|
T Consensus 184 ~vp~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~vKik-------~g---~----~~~~d~e~v~avR~a~---G~d~~l- 245 (441)
T 2hxt_A 184 GYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLK-------VG---A----NVQDDIRRCRLARAAI---GPDIAM- 245 (441)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHHTTCSEEEEE-------CC---S----CHHHHHHHHHHHHHHH---CSSSEE-
T ss_pred CcceeEecccccCCCHHHHHHHHHHHHHcCCCEEEEc-------cC---C----CHHHHHHHHHHHHHhc---CCCCeE-
Confidence 4665432111223 56778888899999999999982 22 1 3566788888887764 677766
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hc
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL 302 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---el 302 (456)
+.|+.....++++++.++++.+.|.+ |+|-+ .+.+.++++.+.+..+|+..+ +. ..+..++. +.
T Consensus 246 -~vDan~~~~~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~~iPIa~d-----E~--~~~~~~~~~~i~~ 315 (441)
T 2hxt_A 246 -AVDANQRWDVGPAIDWMRQLAEFDIA--WIEEPTSPDDVLGHAAIRQGITPVPVSTG-----EH--TQNRVVFKQLLQA 315 (441)
T ss_dssp -EEECTTCCCHHHHHHHHHTTGGGCCS--CEECCSCTTCHHHHHHHHHHHTTSCEEEC-----TT--CCSHHHHHHHHHH
T ss_pred -EEECCCCCCHHHHHHHHHHHHhcCCC--eeeCCCCHHHHHHHHHHHhhCCCCCEEEe-----CC--cCCHHHHHHHHHc
Confidence 46777777899999999999999877 56653 256788888887633676543 21 23554444 34
Q ss_pred C-CCEEeccch
Q 012815 303 G-FKLVAYPLS 312 (456)
Q Consensus 303 G-v~~Vs~p~~ 312 (456)
| ++.|..-..
T Consensus 316 ~~~d~v~ik~~ 326 (441)
T 2hxt_A 316 GAVDLIQIDAA 326 (441)
T ss_dssp TCCSEECCCTT
T ss_pred CCCCEEEeCcc
Confidence 4 677766444
No 171
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.14 E-value=0.55 Score=48.74 Aligned_cols=168 Identities=14% Similarity=0.075 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHhc-------cCCcEEEeCCCCCC---C-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcc-c
Q 012815 134 SYGEMVDQGQLITQA-------VSIPVIGDGDNGYG---N-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-V 201 (456)
Q Consensus 134 t~~Eml~~~r~I~ra-------~~iPVIaD~DtGYG---~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~-l 201 (456)
..+.+++..+...+. ...||++-+ .|.- + .+...+.++++.+. ++.|-|.=. |-+..|.. +
T Consensus 158 G~d~~~~~l~~~~~~~~~~~~~~~~~vgvnI-g~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiS-----cPNt~Gl~~l 230 (415)
T 3i65_A 158 GCDKVTENLILFRKRQEEDKLLSKHIVGVSI-GKNKDTVNIVDDLKYCINKIGRY-ADYIAINVS-----SPNTPGLRDN 230 (415)
T ss_dssp CHHHHHHHHHHHHHHHTTCGGGTTCEEEEEE-CCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECC-----CCC-------
T ss_pred hHHHHHHHHHHHHhhccccccccCceEEEEe-ccccCccccHHHHHHHHHHHHhh-CCEEEEECC-----CCCCCCcccc
Confidence 466777776654432 246787776 2211 1 35566677777664 777766443 54544432 3
Q ss_pred cCHHHHHHHHHHHHHHhHhh-----------------CCC-eEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC
Q 012815 202 VSREEAVMRIKAAVDARKES-----------------GSD-IVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA 263 (456)
Q Consensus 202 vp~ee~v~kI~AA~~Ar~~~-----------------G~d-fvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~ 263 (456)
...+.+.+-+++++++++.+ ..+ ++|--+-|- .-++..+-|++..++|||.|.+....
T Consensus 231 q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~----~~~~i~~iA~~a~~aGaDgIiv~Ntt 306 (415)
T 3i65_A 231 QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDL----NQEQKKEIADVLLETNIDGMIISNTT 306 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCC----CHHHHHHHHHHHHHHTCSEEEECCCB
T ss_pred cCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCC----CHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 34454444555555543210 234 455555543 22467788899999999999987521
Q ss_pred ------------------------CHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 264 ------------------------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 264 ------------------------s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+.+.++++.+.++ .+|+..+ +|-...-+..+.-++|...|..+..++..
T Consensus 307 ~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~----GGI~s~eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 307 TQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS----GGIFSGLDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp SCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEC----SSCCSHHHHHHHHHHTEEEEEESHHHHHH
T ss_pred cccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEE----CCCCCHHHHHHHHHcCCCEEEEcHHHHhc
Confidence 1256778888874 3777643 34322223455556899999998887654
No 172
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.10 E-value=0.065 Score=52.30 Aligned_cols=84 Identities=6% Similarity=-0.073 Sum_probs=56.6
Q ss_pred HHHHHHHHhCCc---EEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012815 100 LSAKLVEKSGFS---FCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (456)
Q Consensus 100 lSArl~e~aGfd---AI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~ 176 (456)
-.|+.++++||| +|-+.-.+ -. ..|..+. .-+.+.+.+.++.|.+.+++||++=+-.++ +..++.+.++.+++
T Consensus 110 ~~a~~~~~~g~d~~~~iein~~~-P~-~~g~~~~-g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-~~~~~~~~a~~~~~ 185 (314)
T 2e6f_A 110 AMVRRLAPVAQEKGVLLELNLSC-PN-VPGKPQV-AYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-DIAHFDTAAAVLNE 185 (314)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCC-CC-STTCCCG-GGSHHHHHHHHHHHHHHHCSCEEEEECCCC-CHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcCceEEEEcCC-CC-CCCchhh-cCCHHHHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHh
Confidence 345667778999 77775111 00 1232221 125666677788888878999999875554 56677888899999
Q ss_pred hC-ccEEEeCCC
Q 012815 177 AG-FAGIILEDQ 187 (456)
Q Consensus 177 AG-aaGI~IEDq 187 (456)
+| +++|.+-+.
T Consensus 186 aG~~d~i~v~~~ 197 (314)
T 2e6f_A 186 FPLVKFVTCVNS 197 (314)
T ss_dssp CTTEEEEEECCC
T ss_pred cCCceEEEEeCC
Confidence 99 999987664
No 173
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=95.09 E-value=0.35 Score=49.58 Aligned_cols=135 Identities=9% Similarity=0.169 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
.++++.+.+.++++.+.|...++|--.. ...|+.+... .-+.++-+++|++++++. |+++.|.. |+......
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~--~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~v--DaN~~~~~ 214 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAG--PYTAYSGHQLSLEVLDRCELFCRRVREAV---GSKADLLF--GTHGQMVP 214 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSC--CCBTTCCBCCCHHHHHHHHHHHHHHHHHH---TTSSEEEE--CCCSCBCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC--CCccccccccchhhHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCH
Confidence 3567889999999999999999993211 0012111110 112466778888887764 56776654 77777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~~ 312 (456)
++|++-++++.++|.+ |+|-+ .+.+.++++.+.++ +|+... +. ..+. +++-+.| +..|..-..
T Consensus 215 ~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~~d~~ 284 (412)
T 4e4u_A 215 SSAIRLAKRLEKYDPL--WFEEPVPPGQEEAIAQVAKHTS-IPIATG-----ER--LTTKYEFHKLLQAGGASILQLNVA 284 (412)
T ss_dssp HHHHHHHHHHGGGCCS--EEECCSCSSCHHHHHHHHHTCS-SCEEEC-----TT--CCHHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHHhhhcCCc--EEECCCChhhHHHHHHHHhhCC-CCEEec-----Cc--cCCHHHHHHHHHcCCCCEEEeCcc
Confidence 9999999999999865 55543 26788999998876 777643 21 1234 4444456 666655433
No 174
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=95.03 E-value=0.14 Score=51.73 Aligned_cols=133 Identities=14% Similarity=0.091 Sum_probs=90.6
Q ss_pred CCcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 150 SIPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 150 ~iPVIaD~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
.+|+.+= -| .++++...+.++++.++|..+++|- +|+. +.+. +++|++++++. |+++.|.
T Consensus 152 ~vp~~~~--~g~~~~~e~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~-~e~v~avr~a~---g~d~~l~ 212 (388)
T 2nql_A 152 SFPAYVS--GLPERTLKARGELAKYWQDRGFNAFKFA-------TPVA------DDGP-AAEIANLRQVL---GPQAKIA 212 (388)
T ss_dssp EEEEEEE--CCCCSSHHHHHHHHHHHHHTTCCEEEEE-------GGGC------TTCH-HHHHHHHHHHH---CTTSEEE
T ss_pred ceEeeEE--eCCCCCHHHHHHHHHHHHHhCCCEEEEe-------CCCC------ChHH-HHHHHHHHHHh---CCCCEEE
Confidence 3666552 24 3577888889999999999999982 3431 2345 77888887664 5676665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hc
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL 302 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---el 302 (456)
. |+.....++++++-++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.++++ +.
T Consensus 213 v--Dan~~~~~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPI~~d-----E~--~~~~~~~~~~i~~ 280 (388)
T 2nql_A 213 A--DMHWNQTPERALELIAEMQPFDPW--FAEAPVWTEDIAGLEKVSKNTD-VPIAVG-----EE--WRTHWDMRARIER 280 (388)
T ss_dssp E--ECCSCSCHHHHHHHHHHHGGGCCS--CEECCSCTTCHHHHHHHHTSCC-SCEEEC-----TT--CCSHHHHHHHHTT
T ss_pred E--ECCCCCCHHHHHHHHHHHhhcCCC--EEECCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHHc
Confidence 4 666667889999999999999877 45553 36778889988876 777643 22 23454444 44
Q ss_pred C-CCEEeccchH
Q 012815 303 G-FKLVAYPLSL 313 (456)
Q Consensus 303 G-v~~Vs~p~~l 313 (456)
| ++.|..-..-
T Consensus 281 ~~~d~v~ik~~~ 292 (388)
T 2nql_A 281 CRIAIVQPEMGH 292 (388)
T ss_dssp SCCSEECCCHHH
T ss_pred CCCCEEEecCCC
Confidence 5 7777765544
No 175
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.00 E-value=0.3 Score=48.89 Aligned_cols=158 Identities=15% Similarity=0.045 Sum_probs=93.5
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccCCcEEEeCCCC-C---C-C
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAVSIPVIGDGDNG-Y---G-N 163 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~iPVIaD~DtG-Y---G-~ 163 (456)
-.|+.++++|||+|=+= ||-+.-. ..-..|.---+++. +++.+++|+++++.||.+-+--. | | +
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~ 227 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLT 227 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 46788889999999875 3333211 11123421124553 35566777777789988755432 1 2 3
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 164 AMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
.++..+.++.++++|++.|++-+.. .+.... .+ +-.. -+++.+|+.++ +..++.+++...
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~--~~-~~~~-~~~~~~ik~~~------~iPVi~~GgI~s--------- 288 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMN--VY-PGYQ-VPFAELIRREA------DIPTGAVGLITS--------- 288 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCC--CC-TTTT-HHHHHHHHHHT------TCCEEEESSCCC---------
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCC--CC-cccc-HHHHHHHHHHc------CCcEEeeCCCCC---------
Confidence 4678889999999999999996542 111000 01 1011 23455554332 345666666432
Q ss_pred HHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 243 LRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 243 I~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.++.+.+.| ||+|.+-- +.+++..+++.+.++
T Consensus 289 ~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 289 GWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp HHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 24466677788 99998843 456677888888765
No 176
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=94.97 E-value=1 Score=45.83 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=53.7
Q ss_pred CChHHH-HHHHHhCCcEEEec--chHHhhhhcccCCCCCCCHH-HHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHH
Q 012815 97 FDALSA-KLVEKSGFSFCFTS--GFSISAARLALPDTGFISYG-EMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVK 172 (456)
Q Consensus 97 yDalSA-rl~e~aGfdAI~vS--G~avSas~lG~PD~~~lt~~-Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk 172 (456)
|+.-.+ +.++..+.+++.+- ...-. .. |... -.+. ..++.++.|++.+++||++-. .|+|-. .+.++
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~--~~--p~g~-~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s---~~~A~ 205 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEV--FQ--PEGE-PEYQIYALEKLRDISKELSVPIIVKE-SGNGIS---METAK 205 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHH--HS--SSCC-CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCC---HHHHH
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhh--hC--CCCC-chhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCC---HHHHH
Confidence 776665 45666677777765 22221 11 3211 1222 467788889999999999986 777743 45678
Q ss_pred HHHHhCccEEEeCC
Q 012815 173 GYIKAGFAGIILED 186 (456)
Q Consensus 173 ~l~~AGaaGI~IED 186 (456)
.++++||++|.+-.
T Consensus 206 ~l~~aGad~I~V~g 219 (368)
T 3vkj_A 206 LLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHTTCCEEECCC
T ss_pred HHHhCCCCEEEEeC
Confidence 89999999999854
No 177
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=94.94 E-value=0.058 Score=53.51 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=92.3
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhh-------hhcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-------s~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..++..+++. .+.+.+++..+-. +.+|.|= .+. .+++||...++.
T Consensus 75 ~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~ 153 (288)
T 3tml_A 75 EGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV-VDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDK 153 (288)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 334567777776678888999999999999998 9999999843211 2356663 444 588887666554
Q ss_pred HHh-------------------------------------ccCCcEEEeCCCC-----------CCCHHHHHHHHHHHHH
Q 012815 145 ITQ-------------------------------------AVSIPVIGDGDNG-----------YGNAMNVKRTVKGYIK 176 (456)
Q Consensus 145 I~r-------------------------------------a~~iPVIaD~DtG-----------YG~~~nv~rtVk~l~~ 176 (456)
|.. .+++||++|.++. -|...-|....+..+.
T Consensus 154 i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA 233 (288)
T 3tml_A 154 ARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRETNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVA 233 (288)
T ss_dssp HHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGGGSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHH
T ss_pred HHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHhcCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHH
Confidence 421 1468999997764 2444455666777888
Q ss_pred hCccEEEeCCCCCCCCccCCCCccccCHHH---HHHHHHHHHHHh
Q 012815 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREE---AVMRIKAAVDAR 218 (456)
Q Consensus 177 AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee---~v~kI~AA~~Ar 218 (456)
+||+|+.||=-..|.+- -.+++.-+++++ +++.|+.+.++.
T Consensus 234 ~GadGl~iE~H~~pd~a-l~D~~~sl~p~el~~lv~~ir~i~~al 277 (288)
T 3tml_A 234 TGVAGLFMETHPNPAEA-KSDGPNAVPLNRMGALLETLVTLDQAV 277 (288)
T ss_dssp HCCSEEEEEEESSGGGC-SSCGGGCEEGGGHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeccChhhc-CCchhhcCCHHHHHHHHHHHHHHHHHh
Confidence 99999999987655322 125554444444 555555554443
No 178
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.93 E-value=0.17 Score=48.06 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=67.7
Q ss_pred HHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCC---CCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT---GFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~---~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
.+-+..++.+..+++++++.--|+.++++|++.|.++-. |+.+. ...++ +.++++++. ++|||+.
T Consensus 120 ~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~-------g~t~~~~~~~~~~----~~i~~l~~~-~ipvIA~ 187 (232)
T 3igs_A 120 ALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMS-------GYTTPDTPEEPDL----PLVKALHDA-GCRVIAE 187 (232)
T ss_dssp HHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTT-------TSSSSSCCSSCCH----HHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCc-------cCCCCCCCCCCCH----HHHHHHHhc-CCcEEEE
Confidence 333334444788999999999999999999999975422 22211 11233 344556666 8999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHH
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~ 215 (456)
.|..++.++. ++.++||+||.+= . .++.+++..+++..+.
T Consensus 188 --GGI~t~~d~~----~~~~~GadgV~VG-s------------al~~p~~~~~~~~~~i 227 (232)
T 3igs_A 188 --GRYNSPALAA----EAIRYGAWAVTVG-S------------AITRLEHICGWYNDAL 227 (232)
T ss_dssp --SCCCSHHHHH----HHHHTTCSEEEEC-H------------HHHCHHHHHHHHHHHH
T ss_pred --CCCCCHHHHH----HHHHcCCCEEEEe-h------------HhcCHHHHHHHHHHHH
Confidence 3555555544 5667899999982 2 2445566666665544
No 179
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.90 E-value=0.32 Score=44.16 Aligned_cols=139 Identities=15% Similarity=0.107 Sum_probs=76.9
Q ss_pred HHHHHHhcc-CCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 141 QGQLITQAV-SIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 141 ~~r~I~ra~-~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
.++.+.+.+ +.|+++|+=. .| ++. .++.+.++||++|++-+.. + ++.... +++..
T Consensus 43 ~i~~l~~~~~~~~i~~~l~~--~di~~~---~~~~a~~~Gad~v~vh~~~---------~------~~~~~~---~~~~~ 99 (207)
T 3ajx_A 43 VITAVKKAHPDKIVFADMKT--MDAGEL---EADIAFKAGADLVTVLGSA---------D------DSTIAG---AVKAA 99 (207)
T ss_dssp HHHHHHHHSTTSEEEEEEEE--CSCHHH---HHHHHHHTTCSEEEEETTS---------C------HHHHHH---HHHHH
T ss_pred HHHHHHHhCCCCeEEEEEEe--cCccHH---HHHHHHhCCCCEEEEeccC---------C------hHHHHH---HHHHH
Confidence 455666666 7899888753 36 433 2477889999999764431 0 122222 22223
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE-EeccC-------CCH-HHHHHHHHhCCCCceeeeeeccCC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL-FIDAL-------ASK-EEMKAFCEISPLVPKMANMLEGGG 289 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I-fie~~-------~s~-eei~~i~~~v~~vP~~~N~~~~~g 289 (456)
++.|....+ . . ......++ +++.+.+.|+|.| +..+. .-. +.++++++. + +|+.+ .||
T Consensus 100 ~~~g~~~gv-~-~--~s~~~p~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~-~-~pi~v----~GG 166 (207)
T 3ajx_A 100 QAHNKGVVV-D-L--IGIEDKAT---RAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA-R-VPFSV----AGG 166 (207)
T ss_dssp HHHTCEEEE-E-C--TTCSSHHH---HHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH-T-SCEEE----ESS
T ss_pred HHcCCceEE-E-E--ecCCChHH---HHHHHHHhCCCEEEEEecccccccCCCchHHHHHHhhCC-C-CCEEE----ECC
Confidence 222433211 1 1 11111222 4555567799999 65432 111 455555553 2 45432 245
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 290 KTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 290 ~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
-+| -+++++.+.|...+..+..++.+
T Consensus 167 I~~-~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 167 VKV-ATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp CCG-GGHHHHHHTTCSEEEESHHHHTS
T ss_pred cCH-HHHHHHHHcCCCEEEEeeeccCC
Confidence 443 36788899999999999888764
No 180
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.88 E-value=0.43 Score=48.65 Aligned_cols=166 Identities=15% Similarity=0.125 Sum_probs=90.8
Q ss_pred ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012815 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (456)
Q Consensus 95 gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l 174 (456)
++=|.-.|+.+.++|.-.+. + ..++.+|+...++... .++.+- .|......+.++.+
T Consensus 52 ~vte~~lA~A~a~~Gg~gvi--~-------------~~~s~ee~~~~i~~~~----~~~~~~----~g~~~~~~e~~~~a 108 (361)
T 3r2g_A 52 TITESNMANFMHSKGAMGAL--H-------------RFMTIEENIQEFKKCK----GPVFVS----VGCTENELQRAEAL 108 (361)
T ss_dssp TTCSHHHHHHHHHTTCEEBC--C-------------SCSCHHHHHHHHHTCC----SCCBEE----ECSSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHcCCCEEE--e-------------CCCCHHHHHHHHhhcc----eEEEEE----cCCCHHHHHHHHHH
Confidence 44567778888888732221 1 1268888776655432 222221 23445677889999
Q ss_pred HHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCC
Q 012815 175 IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGA 254 (456)
+++|++.|.| |.. +||. +.+.+.|+.++++. ++..|++.+-. . .+-++...++||
T Consensus 109 ~~aGvdvI~i-d~a----~G~~--------~~~~e~I~~ir~~~----~~~~Vi~G~V~----T----~e~A~~a~~aGa 163 (361)
T 3r2g_A 109 RDAGADFFCV-DVA----HAHA--------KYVGKTLKSLRQLL----GSRCIMAGNVA----T----YAGADYLASCGA 163 (361)
T ss_dssp HHTTCCEEEE-ECS----CCSS--------HHHHHHHHHHHHHH----TTCEEEEEEEC----S----HHHHHHHHHTTC
T ss_pred HHcCCCEEEE-eCC----CCCc--------HhHHHHHHHHHHhc----CCCeEEEcCcC----C----HHHHHHHHHcCC
Confidence 9999998877 432 2442 22233444444432 35566664211 1 244778889999
Q ss_pred CEEEec--c-------------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 255 DVLFID--A-------------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 255 D~Ifie--~-------------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
|+|.+- + .+..+.+.++++... |+++ .+|-...-.....-++|...|..|..++
T Consensus 164 D~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~--PVIA----dGGI~~~~di~kALa~GAd~V~iGr~f~ 232 (361)
T 3r2g_A 164 DIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR--SIVA----DGGIKTSGDIVKALAFGADFVMIGGMLA 232 (361)
T ss_dssp SEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS--EEEE----ESCCCSHHHHHHHHHTTCSEEEESGGGT
T ss_pred CEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC--CEEE----ECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 999972 1 122333334333322 4443 2342211234445568999888876443
No 181
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.88 E-value=0.19 Score=47.72 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=67.3
Q ss_pred HHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCC---CCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDT---GFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~---~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
.+-+..++.+..+++++++.--|+.++++|++.|.++-. |+.+. ...++ +.++++++. ++|||+.
T Consensus 120 ~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~-------g~t~~~~~~~~~~----~li~~l~~~-~ipvIA~ 187 (229)
T 3q58_A 120 SLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLS-------GYTGPITPVEPDL----AMVTQLSHA-GCRVIAE 187 (229)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTT-------TSSSSCCCSSCCH----HHHHHHHTT-TCCEEEE
T ss_pred HHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCc-------cCCCCCcCCCCCH----HHHHHHHHc-CCCEEEE
Confidence 333334444788999999999999999999999975422 22211 11222 445666666 8999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHH
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAA 214 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA 214 (456)
.|..++.++. ++.++||+||.+= . .++.++...+++..+
T Consensus 188 --GGI~t~~d~~----~~~~~GadgV~VG-s------------ai~~p~~~~~~f~~~ 226 (229)
T 3q58_A 188 --GRYNTPALAA----NAIEHGAWAVTVG-S------------AITRIEHICQWFSHA 226 (229)
T ss_dssp --SSCCSHHHHH----HHHHTTCSEEEEC-H------------HHHCHHHHHHHHHHH
T ss_pred --CCCCCHHHHH----HHHHcCCCEEEEc-h------------HhcChHHHHHHHHHH
Confidence 4555655554 5667899999982 2 244555666665443
No 182
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=94.83 E-value=1.3 Score=44.23 Aligned_cols=133 Identities=20% Similarity=0.260 Sum_probs=91.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|+++++...+.++++.+.|...+||- .|. +.++-++++++++++. |+++.+.. |+......
T Consensus 136 ~~~~~~~~~~~a~~~~~~G~~~~K~K-------~g~-------~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~~ 196 (354)
T 3jva_A 136 GIDEPNVMAQKAVEKVKLGFDTLKIK-------VGT-------GIEADIARVKAIREAV---GFDIKLRL--DANQAWTP 196 (354)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHH---CTTSEEEE--ECTTCSCH
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEE-------eCC-------CHHHHHHHHHHHHHHc---CCCCeEEE--ECCCCCCH
Confidence 56788888899999999999999983 222 1256678888887764 56766644 67677789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hc-CCCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---EL-GFKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---el-Gv~~Vs~p~~ 312 (456)
++|++.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+..+ +. ..+..++. +. .++.|..-..
T Consensus 197 ~~a~~~~~~L~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 197 KDAVKAIQALADYQ--IELVEQPVKRRDLEGLKYVTSQVN-TTIMAD-----ES--CFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp HHHHHHHHHTTTSC--EEEEECCSCTTCHHHHHHHHHHCS-SEEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhcC--CCEEECCCChhhHHHHHHHHHhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCEEEECch
Confidence 99999999998865 6677764 25678889988876 777653 21 23554443 33 4777766555
Q ss_pred HHHHHHHHH
Q 012815 313 LIGVSVRAM 321 (456)
Q Consensus 313 ll~aa~~A~ 321 (456)
-..--..++
T Consensus 267 ~~GGit~~~ 275 (354)
T 3jva_A 267 KCGGIHEAL 275 (354)
T ss_dssp HHTSHHHHH
T ss_pred hcCCHHHHH
Confidence 443333333
No 183
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=94.83 E-value=0.82 Score=47.97 Aligned_cols=264 Identities=16% Similarity=0.152 Sum_probs=146.0
Q ss_pred ceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCc---EEEeCCCCCC
Q 012815 90 VHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP---VIGDGDNGYG 162 (456)
Q Consensus 90 ~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iP---VIaD~DtGYG 162 (456)
.+...|+.+...++.+ ++.+.+.|.-.+-......-||- .++..++...++.+++..++| |+.=.|.|--
T Consensus 22 gi~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYt---G~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~ 98 (450)
T 3txv_A 22 GIPSICSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYT---GMTPEDFTRFVGAIADRIEFPREKILLGGDHLGP 98 (450)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTT---TCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESS
T ss_pred EEEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCC---CCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCC
Confidence 3566777788877765 45588887755422111111331 256688899999999988888 6888999821
Q ss_pred ------CH----HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh----hC-CCeEE
Q 012815 163 ------NA----MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE----SG-SDIVI 227 (456)
Q Consensus 163 ------~~----~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~----~G-~dfvI 227 (456)
++ .+..+.+++++++|..-|+|.....|- +...-.+.+..++|-+..++.+++ .| .+..-
T Consensus 99 ~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~-----eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~y 173 (450)
T 3txv_A 99 NPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCA-----GEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVY 173 (450)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCS-----SSCSBCCHHHHHHHHHHHHHHHHHTC------CCEE
T ss_pred cccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCch-----hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence 11 346788899999999999995543211 111123444444554444444433 12 12333
Q ss_pred EEecch-h-----------hcccHH---HHHHH-HHHhHhcCCC-------EEEe-ccCC---------CHHHHHHHHHh
Q 012815 228 VARTDS-R-----------QALSLE---ESLRR-SRAFADAGAD-------VLFI-DALA---------SKEEMKAFCEI 274 (456)
Q Consensus 228 iARTDA-~-----------~~~~ld---eAI~R-akAy~eAGAD-------~Ifi-e~~~---------s~eei~~i~~~ 274 (456)
+.=|+. . ....-+ +.|+. ..++.+.|.| ++.+ +|+. +.+.++++.+.
T Consensus 174 viGtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~ 253 (450)
T 3txv_A 174 IIGTEVPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSAT 253 (450)
T ss_dssp EEECC-------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHG
T ss_pred EeeeecCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHH
Confidence 333432 1 012233 34443 4567778887 5544 2321 23466666666
Q ss_pred CCCCceeeeeeccCCCCCCCCHHH---HHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHhcCc
Q 012815 275 SPLVPKMANMLEGGGKTPILNPLE---LEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGF 351 (456)
Q Consensus 275 v~~vP~~~N~~~~~g~tp~lt~~e---L~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g~~~~~~~~~~~~e~~~lvg~ 351 (456)
++.+|.+ ++++ +.|...+.+. +-+.||+.+-+++.+..+...|+.. |..|.+.-.+ ....-.+.+..+-+=+
T Consensus 254 v~~~P~L--Vlhg-hStDy~~~e~l~~~V~~GiaklNVgp~Lt~a~reAl~a-L~~ie~~l~~-~~~~s~l~~~l~~~m~ 328 (450)
T 3txv_A 254 LGQLHGM--VFEA-HSTDYQTPDALRELVADGFAILKVGPGLTFALREALYG-LDQIAAFLFP-AARERTLAEVTEAVMR 328 (450)
T ss_dssp GGTSTTC--EEEE-SCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHH-HHHHHHHHCT-TSCSSCHHHHHHHHHH
T ss_pred hccCCCE--EEec-CCCCCCCHHHHHHHHHcCCcEEEEChHHHHHHHHHHHH-HHHHHHHHcc-cCCcccHHHHHHHHHH
Confidence 6446622 3455 4555667655 5557999999999988765555432 3333221111 1223456666555544
Q ss_pred ccHHHHHHccccccc
Q 012815 352 NTYYEEEKRYATSMR 366 (456)
Q Consensus 352 ~~~~~~e~~y~~~~~ 366 (456)
++=..+++.|...+.
T Consensus 329 ~~p~~W~k~y~g~~~ 343 (450)
T 3txv_A 329 EEPANWAKYYHGSAE 343 (450)
T ss_dssp HCTHHHHTTCCSSHH
T ss_pred hCchhhhhhcCCCHH
Confidence 444445566665544
No 184
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.78 E-value=0.3 Score=48.20 Aligned_cols=148 Identities=11% Similarity=0.092 Sum_probs=77.6
Q ss_pred hCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc---------CCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 108 SGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAV---------SIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 108 aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~---------~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
.|||+|-+- +... ..|..+.. ..+.+.+.++.|.+.+ ++||++=+-.++ +.+++.+.++.++++
T Consensus 164 ~g~d~iein~~sP~---~~g~~~~~--~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~-~~~~~~~~a~~l~~~ 237 (336)
T 1f76_A 164 AYAGYIAINISSPN---TPGLRTLQ--YGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDL-SEEELIQVADSLVRH 237 (336)
T ss_dssp GGCSEEEEECCCSS---STTGGGGG--SHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCC-CHHHHHHHHHHHHHT
T ss_pred ccCCEEEEEccCCC---CCCccccc--CHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCC-CHHHHHHHHHHHHHc
Confidence 389997664 1111 11221211 2333444455555554 799999876543 345678888999999
Q ss_pred CccEEEeCCCCCCC----------CccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012815 178 GFAGIILEDQVSPK----------GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (456)
Q Consensus 178 GaaGI~IEDq~~pK----------~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~Rak 247 (456)
|+++|++-...... ..|...|+++.|. ....++.++++. +.++-|++=-.-... +.+.
T Consensus 238 Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~--~~~~i~~i~~~~---~~~ipVi~~GGI~~~-------~da~ 305 (336)
T 1f76_A 238 NIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLK--STEIIRRLSLEL---NGRLPIIGVGGIDSV-------IAAR 305 (336)
T ss_dssp TCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHH--HHHHHHHHHHHH---TTSSCEEEESSCCSH-------HHHH
T ss_pred CCcEEEEeCCcccccccccccccccCCCcCCchhHHH--HHHHHHHHHHHh---CCCCCEEEECCCCCH-------HHHH
Confidence 99999997653100 0111123333322 223333333332 123444443332221 3355
Q ss_pred HhHhcCCCEEEecc--CC-CHHHHHHHHH
Q 012815 248 AFADAGADVLFIDA--LA-SKEEMKAFCE 273 (456)
Q Consensus 248 Ay~eAGAD~Ifie~--~~-s~eei~~i~~ 273 (456)
.+.++|||+|.+-. +. ++..++++.+
T Consensus 306 ~~l~~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 306 EKIAAGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp HHHHHTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred HHHHCCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 55668999999854 22 5556666554
No 185
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.77 E-value=0.28 Score=45.00 Aligned_cols=85 Identities=16% Similarity=0.087 Sum_probs=58.0
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVK 168 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~ 168 (456)
+..+++++++...++.++++|++.|.++..+... +.++.. +...-++.++++.+.+++||+++. |..++.+
T Consensus 119 ~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~---~~~~~~--~~~~~~~~~~~~~~~~~ipvia~G--GI~~~~~-- 189 (223)
T 1y0e_A 119 NVEIMADIATVEEAKNAARLGFDYIGTTLHGYTS---YTQGQL--LYQNDFQFLKDVLQSVDAKVIAEG--NVITPDM-- 189 (223)
T ss_dssp TSEEEEECSSHHHHHHHHHTTCSEEECTTTTSST---TSTTCC--TTHHHHHHHHHHHHHCCSEEEEES--SCCSHHH--
T ss_pred CceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcC---CCCCCC--CCcccHHHHHHHHhhCCCCEEEec--CCCCHHH--
Confidence 5777889999999999999999998765322110 111211 123345677888888899999983 3435444
Q ss_pred HHHHHHHHhCccEEEe
Q 012815 169 RTVKGYIKAGFAGIIL 184 (456)
Q Consensus 169 rtVk~l~~AGaaGI~I 184 (456)
++++.++||+++.+
T Consensus 190 --~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 190 --YKRVMDLGVHCSVV 203 (223)
T ss_dssp --HHHHHHTTCSEEEE
T ss_pred --HHHHHHcCCCEEEE
Confidence 44666789999988
No 186
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=94.76 E-value=0.15 Score=51.42 Aligned_cols=133 Identities=20% Similarity=0.300 Sum_probs=90.6
Q ss_pred CCcEEEeCCCC--CCCH---HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCC
Q 012815 150 SIPVIGDGDNG--YGNA---MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD 224 (456)
Q Consensus 150 ~iPVIaD~DtG--YG~~---~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~d 224 (456)
.+|+.+= +| .+++ +...+.++++.++|..+++|- +||. +.++-+++|++++++. |++
T Consensus 123 ~vp~~~~--~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik-------~g~~------~~~~d~e~v~avR~a~---G~d 184 (382)
T 2gdq_A 123 EIPVYAS--FQSYSDSPQWISRSVSNVEAQLKKGFEQIKVK-------IGGT------SFKEDVRHINALQHTA---GSS 184 (382)
T ss_dssp EEEEEEE--CCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEE-------CSSS------CHHHHHHHHHHHHHHH---CTT
T ss_pred ceeEEEE--ecccCCCcccHHHHHHHHHHHHHcCCCEEEEc-------CCCC------CHHHHHHHHHHHHHhh---CCC
Confidence 3666542 23 2567 778888899999999999982 4551 3466788888887765 567
Q ss_pred eEEEEecchhhcccHHHHHHHHHHhHhc-CCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---H
Q 012815 225 IVIVARTDSRQALSLEESLRRSRAFADA-GADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---L 297 (456)
Q Consensus 225 fvIiARTDA~~~~~ldeAI~RakAy~eA-GAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~ 297 (456)
+.|.. |+.....++++++.++++.+. | ..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+. +
T Consensus 185 ~~l~v--Dan~~~~~~~a~~~~~~l~~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~ 252 (382)
T 2gdq_A 185 ITMIL--DANQSYDAAAAFKWERYFSEWTN--IGWLEEPLPFDQPQDYAMLRSRLS-VPVAGG-----EN--MKGPAQYV 252 (382)
T ss_dssp SEEEE--ECTTCCCHHHHHTTHHHHTTCSC--EEEEECCSCSSCHHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHH
T ss_pred CEEEE--ECCCCCCHHHHHHHHHHHhhccC--CeEEECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHH
Confidence 66653 776777889999999998887 5 4577763 36778889988876 776643 21 1344 4
Q ss_pred HHHhcC-CCEEeccch
Q 012815 298 ELEELG-FKLVAYPLS 312 (456)
Q Consensus 298 eL~elG-v~~Vs~p~~ 312 (456)
++-+.| ++.|..-..
T Consensus 253 ~~i~~~~~d~v~ik~~ 268 (382)
T 2gdq_A 253 PLLSQRCLDIIQPDVM 268 (382)
T ss_dssp HHHHTTCCSEECCCTT
T ss_pred HHHHcCCCCEEecCcc
Confidence 444455 677766443
No 187
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=94.72 E-value=1.1 Score=45.61 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=93.6
Q ss_pred CCcEEEeCCCC-CCCHHHHHHHH-HHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNG-YGNAMNVKRTV-KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtG-YG~~~nv~rtV-k~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
.+|+-+-...+ +.+++.+.+.+ +++.+.|...+||-=+. .......+.++-+++|++++++. |+++.|
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~-------~~~~~~~~~~~d~~~v~avR~a~---g~~~~l 194 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDG-------DRTRCDVDIPGDIAKARAVRELL---GPDAVI 194 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCC-------CTTCCSCCHHHHHHHHHHHHHHH---CTTCCE
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCC-------CCcccccCHHHHHHHHHHHHHHh---CCCCeE
Confidence 36666543222 34678888888 89999999999994321 11111225677788999888774 556555
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHh
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEE 301 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~e 301 (456)
.. |+......++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+
T Consensus 195 ~v--DaN~~~~~~~A~~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~ 262 (393)
T 4dwd_A 195 GF--DANNGYSVGGAIRVGRALEDLGYS--WFEEPVQHYHVGAMGEVAQRLD-ITVSAG-----EQ--TYTLQALKDLIL 262 (393)
T ss_dssp EE--ECTTCCCHHHHHHHHHHHHHTTCS--EEECCSCTTCHHHHHHHHHHCS-SEEEBC-----TT--CCSHHHHHHHHH
T ss_pred EE--ECCCCCCHHHHHHHHHHHHhhCCC--EEECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHH
Confidence 43 777777899999999999998765 55543 36788999998876 776543 21 234444 444
Q ss_pred cCCCEEeccchH
Q 012815 302 LGFKLVAYPLSL 313 (456)
Q Consensus 302 lGv~~Vs~p~~l 313 (456)
.|+..|..-..-
T Consensus 263 ~~~d~v~~k~~~ 274 (393)
T 4dwd_A 263 SGVRMVQPDIVK 274 (393)
T ss_dssp HTCCEECCCTTT
T ss_pred cCCCEEEeCccc
Confidence 576666664443
No 188
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=94.70 E-value=0.086 Score=51.87 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=82.9
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhh-------hhcccCC---CCC-CCHHHHHHHHHHH
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-------ARLALPD---TGF-ISYGEMVDQGQLI 145 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-------s~lG~PD---~~~-lt~~Eml~~~r~I 145 (456)
.-+.|++..++-+..++-.+||..++..+++. .+.+.+++..+-. +.+|.|= ++. .+++|+...+..|
T Consensus 74 gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i 152 (280)
T 2qkf_A 74 GLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKF 152 (280)
T ss_dssp HHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHHH
Confidence 34557776666677788899999999999999 9999999843321 2345543 344 4788887776655
Q ss_pred Hh--------------------------------cc-CCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCccE
Q 012815 146 TQ--------------------------------AV-SIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 146 ~r--------------------------------a~-~iPVIaD~DtG-----------YG~~~nv~rtVk~l~~AGaaG 181 (456)
.. .. ++||++|.+++ -|...-+....+..+.+||+|
T Consensus 153 ~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G 232 (280)
T 2qkf_A 153 HEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAG 232 (280)
T ss_dssp HHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSE
T ss_pred HHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCE
Confidence 32 24 79999998877 343334455566777899999
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHH
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD 216 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~ 216 (456)
+.||--..|.+-- .+|+.-++++++.+-++.++.
T Consensus 233 ~~IE~H~~~d~al-~D~~~sl~p~~l~~lv~~i~~ 266 (280)
T 2qkf_A 233 LFLESHPDPKLAK-CDGPSALPLHLLEDFLIRIKA 266 (280)
T ss_dssp EEEEC-----------------CCHHHHHHHHHHH
T ss_pred EEEeecCCcccCC-CccccCCCHHHHHHHHHHHHH
Confidence 9999765432211 144444444554444444443
No 189
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.65 E-value=0.37 Score=49.85 Aligned_cols=155 Identities=17% Similarity=0.244 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhCccEEEeCCCC-----------CCCCccCCCCccccCH-HHHHHHHHHHHHHhH-hhCCCeEEEEecch
Q 012815 167 VKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARK-ESGSDIVIVARTDS 233 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~-----------~pK~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~-~~G~dfvIiARTDA 233 (456)
..+++++.++||.+||.|-..- ..||...-+|--|.-. .-..+-|+|++++.. ..+++|.|--|.-.
T Consensus 172 F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~ 251 (419)
T 3l5a_A 172 YRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATP 251 (419)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccc
Confidence 3455577778999999997652 1234333333221222 223334444444432 22678999989644
Q ss_pred hh------cccHHHHHHHHHHhHh-cCCCEEEeccCC---------------CHHHHHHHHHhCC-CCceeeeeeccCC-
Q 012815 234 RQ------ALSLEESLRRSRAFAD-AGADVLFIDALA---------------SKEEMKAFCEISP-LVPKMANMLEGGG- 289 (456)
Q Consensus 234 ~~------~~~ldeAI~RakAy~e-AGAD~Ifie~~~---------------s~eei~~i~~~v~-~vP~~~N~~~~~g- 289 (456)
.. ...++++++-++.+.+ +|+|.|-+.+.. ..+.++++.+.++ .+|+++| |+
T Consensus 252 ~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~----GgI 327 (419)
T 3l5a_A 252 EETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIAS----GGI 327 (419)
T ss_dssp CEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEEC----SSC
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEE----CCC
Confidence 21 3358999999999999 999999775421 1235666767664 3787655 23
Q ss_pred CCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 290 KTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 290 ~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
.+| -..+++-+. +.+|.++-.++.-- +....+++|.
T Consensus 328 ~t~-e~Ae~~L~~-aDlVaiGR~~IanP-----dlv~ki~~G~ 363 (419)
T 3l5a_A 328 NSP-ESALDALQH-ADMVGMSSPFVTEP-----DFVHKLAEQR 363 (419)
T ss_dssp CSH-HHHHHHGGG-CSEEEESTHHHHCT-----THHHHHHTTC
T ss_pred CCH-HHHHHHHHh-CCcHHHHHHHHHCc-----HHHHHHHcCC
Confidence 122 123343344 99999987765422 3455566654
No 190
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=94.64 E-value=0.26 Score=49.83 Aligned_cols=122 Identities=18% Similarity=0.329 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+++.+.+.++++.+.|..+++|- +||. +.++.+++|++++++. |+++.|. .|+.....++++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~---g~~~~l~--vDan~~~~~~~a 226 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMK-------IGGA------PIEEDRMRIEAVLEEI---GKDAQLA--VDANGRFNLETG 226 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEE-------CSSS------CHHHHHHHHHHHHHHH---TTTCEEE--EECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-------CCCC------CHHHHHHHHHHHHHhc---CCCCeEE--EECCCCCCHHHH
Confidence 57778888899999999999983 3441 3466688888887764 5666665 377777789999
Q ss_pred HHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-----CCEEeccc
Q 012815 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-----FKLVAYPL 311 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-----v~~Vs~p~ 311 (456)
++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+. +++-+.| ++.|..-+
T Consensus 227 ~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 227 IAYAKMLRDYPLF--WYEEVGDPLDYALQAALAEFYP-GPMATG-----EN--LFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp HHHHHHHTTSCCS--EEECCSCTTCHHHHHHHTTTCC-SCEEEC-----TT--CCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred HHHHHHHHHcCCC--eecCCCChhhHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 9999999998876 56653 26678888888776 777643 21 1344 4444555 77777644
Q ss_pred h
Q 012815 312 S 312 (456)
Q Consensus 312 ~ 312 (456)
.
T Consensus 297 ~ 297 (392)
T 1tzz_A 297 A 297 (392)
T ss_dssp T
T ss_pred c
Confidence 4
No 191
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=94.63 E-value=1.1 Score=43.92 Aligned_cols=129 Identities=20% Similarity=0.220 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHH--hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE-ecchhhc
Q 012815 160 GYGNAMNVKRTVKGYIK--AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA-RTDSRQA 236 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~--AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA-RTDA~~~ 236 (456)
|--+++++.++++..-+ .|-.=|+||=-. +.+-+.| +..+-++++....+ .+|.++- =+|.
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~--------d~~~llp--D~~~tv~aa~~L~~---~Gf~Vlpy~~dd--- 145 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLA--------DQKTLFP--NVVETLKAAEQLVK---DGFDVMVYTSDD--- 145 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBS--------CTTTCCB--CHHHHHHHHHHHHT---TTCEEEEEECSC---
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeec--------CccccCc--CHHHHHHHHHHHHH---CCCEEEEEeCCC---
Confidence 43367777777766555 377788988642 2233333 22445555655544 3788884 5555
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEecc--------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEe
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs 308 (456)
+.-|++++++|+++|++++ +.+.+.++.+.+... +|+++ +++=.+| -......++|+.-|.
T Consensus 146 ------~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~-vPVI~---eGGI~TP-sDAa~AmeLGAdgVl 214 (265)
T 1wv2_A 146 ------PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAK-VPVLV---DAGVGTA-SDAAIAMELGCEAVL 214 (265)
T ss_dssp ------HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCS-SCBEE---ESCCCSH-HHHHHHHHHTCSEEE
T ss_pred ------HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCC-CCEEE---eCCCCCH-HHHHHHHHcCCCEEE
Confidence 3568999999999999854 357888899988655 78764 4322222 234667889999999
Q ss_pred ccchHHH
Q 012815 309 YPLSLIG 315 (456)
Q Consensus 309 ~p~~ll~ 315 (456)
.+....+
T Consensus 215 VgSAI~~ 221 (265)
T 1wv2_A 215 MNTAIAH 221 (265)
T ss_dssp ESHHHHT
T ss_pred EChHHhC
Confidence 9887654
No 192
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=94.61 E-value=0.073 Score=52.72 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=87.5
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHH-------hhhhcccCC---CCC-CCHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSI-------SAARLALPD---TGF-ISYGEMVDQGQL 144 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~av-------Sas~lG~PD---~~~-lt~~Eml~~~r~ 144 (456)
..-+.|++..++-+..++-.+||..++..+++ ..+.+.++++.+ ..+.+|.|= .+. .+++|+...+..
T Consensus 76 ~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~-~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 76 EGLKIFQELKDTFGVKIITDVHEIYQCQPVAD-VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 33455777766667888889999999999988 799999998332 222345553 344 478888877666
Q ss_pred HHh--------------------------------cc-CCcEEEeCCCC-----------CCCHHHHHHHHHHHHHhCcc
Q 012815 145 ITQ--------------------------------AV-SIPVIGDGDNG-----------YGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 145 I~r--------------------------------a~-~iPVIaD~DtG-----------YG~~~nv~rtVk~l~~AGaa 180 (456)
|.. .. ++||++|.+.+ -|...-+....+..+.+||.
T Consensus 155 i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~ 234 (292)
T 1o60_A 155 IEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIA 234 (292)
T ss_dssp HHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCS
T ss_pred HHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCC
Confidence 532 24 69999999877 23222234455566689999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHH
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAV 215 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~ 215 (456)
|+.||--..|.+-- .+|+.-++++++.+-++.++
T Consensus 235 Gl~IE~H~~~d~al-~Dg~~sl~p~~l~~lv~~ir 268 (292)
T 1o60_A 235 GLFLEAHPNPNQAK-CDGPSALPLSALEGFVSQMK 268 (292)
T ss_dssp EEEEEEESSGGGCS-SCCTTCEEGGGHHHHHHHHH
T ss_pred EEEEEecCCcccCC-chhhcCCCHHHHHHHHHHHH
Confidence 99999765442211 14444445455444444443
No 193
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.54 E-value=0.42 Score=48.65 Aligned_cols=150 Identities=17% Similarity=0.074 Sum_probs=86.9
Q ss_pred HHHHHHHHHH-HhCccEEEeCCCC--------CC---CC-ccCCCCccccC-HHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 166 NVKRTVKGYI-KAGFAGIILEDQV--------SP---KG-CGHTRGRKVVS-REEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 166 nv~rtVk~l~-~AGaaGI~IEDq~--------~p---K~-CGH~~gk~lvp-~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
...+.++..+ ++|.+||.|-..- .| || ...-+|..+.. .+-..+.|++++++. |++. |.-|.
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av---g~~~-v~vRi 250 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV---GSDR-VGLRI 250 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH---CGGG-EEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc---CCCe-EEEEE
Confidence 3446667788 8999999995431 11 22 22222312211 122344444444443 4453 56664
Q ss_pred chh-------hcccHHHHHHHHHHhHhcCCCEEEeccC-------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH
Q 012815 232 DSR-------QALSLEESLRRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL 297 (456)
Q Consensus 232 DA~-------~~~~ldeAI~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~ 297 (456)
... .....+++++-++++.++|+|.|-+... +. + ++++.+.++ +|++.| ++-++ -..+
T Consensus 251 s~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~-~-~~~ir~~~~-iPvi~~----G~it~-~~a~ 322 (379)
T 3aty_A 251 SPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD-V-VAWVRGSYS-GVKISN----LRYDF-EEAD 322 (379)
T ss_dssp CTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC-H-HHHHHTTCC-SCEEEE----SSCCH-HHHH
T ss_pred CcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH-H-HHHHHHHCC-CcEEEE----CCCCH-HHHH
Confidence 432 1235788999999999999999988652 22 5 788888876 787655 23211 1234
Q ss_pred HHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 298 ELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 298 eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
++-+.| +..|.++-.++.-- +....+++|.
T Consensus 323 ~~l~~g~aD~V~igR~~l~~P-----~l~~k~~~g~ 353 (379)
T 3aty_A 323 QQIREGKVDAVAFGAKFIANP-----DLVERAQQNW 353 (379)
T ss_dssp HHHHTTSCSEEEESHHHHHCT-----THHHHHHHTC
T ss_pred HHHHcCCCeEEEecHHHHhCc-----HHHHHHHcCC
Confidence 444556 99999987666532 3445555554
No 194
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=94.53 E-value=0.52 Score=47.80 Aligned_cols=133 Identities=25% Similarity=0.253 Sum_probs=92.6
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
.+|+-+- .|+++++.+.+.++++.+. |...+||-= |. -+.++-+++|++++++. |+++.|
T Consensus 156 ~v~~y~s--~g~~~~e~~~~~a~~~~~~~G~~~~KlKv-------G~------~~~~~d~~~v~avR~a~---G~~~~l- 216 (383)
T 3toy_A 156 PIPAYDS--YGVLDARDDERTLRTACDEHGFRAIKSKG-------GH------GDLATDEAMIKGLRALL---GPDIAL- 216 (383)
T ss_dssp CEEEEEE--CSSCCHHHHHHHHHHHHHTSCCCEEEEEC-------CS------SCHHHHHHHHHHHHHHH---CTTSEE-
T ss_pred ceEEeEe--cCCCCHHHHHHHHHHHHHccCCcEEEEec-------CC------CCHHHHHHHHHHHHHHh---CCCCeE-
Confidence 3565443 4677888899999999999 999999932 22 13466688888887764 567666
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhc
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEEL 302 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~el 302 (456)
+.|+......++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.
T Consensus 217 -~vDaN~~~~~~~A~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~ 285 (383)
T 3toy_A 217 -MLDFNQSLDPAEATRRIARLADYDLT--WIEEPVPQENLSGHAAVRERSE-IPIQAG-----EN--WWFPRGFAEAIAA 285 (383)
T ss_dssp -EEECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHHH
T ss_pred -EEeCCCCCCHHHHHHHHHHHHhhCCC--EEECCCCcchHHHHHHHHhhcC-CCEEeC-----CC--cCCHHHHHHHHHc
Confidence 45787778899999999999998754 66653 26788899998876 787653 21 234444 4444
Q ss_pred C-CCEEeccch
Q 012815 303 G-FKLVAYPLS 312 (456)
Q Consensus 303 G-v~~Vs~p~~ 312 (456)
| +..+..-..
T Consensus 286 ~a~d~v~ik~~ 296 (383)
T 3toy_A 286 GASDFIMPDLM 296 (383)
T ss_dssp TCCSEECCCTT
T ss_pred CCCCEEEeCcc
Confidence 6 666655443
No 195
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=94.48 E-value=0.34 Score=49.25 Aligned_cols=133 Identities=16% Similarity=0.222 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC---CCcccc---CHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT---RGRKVV---SREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~---~gk~lv---p~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
++....+.++++.++|..+++|--. +.-|+. .+..+. +.++.+++|++++++. |+++.| +.|+...
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~---~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~---G~d~~l--~vDan~~ 220 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVD---DITGPLHRDFWNGAISPREHEAMVARVAAVREAV---GPEVEV--AIDMHGR 220 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC---CSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH---CSSSEE--EEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeecc---ccCCcccCCcCccccchhhHHHHHHHHHHHHHhc---CCCCEE--EEECCCC
Confidence 4667888889999999999998421 000220 011121 3456677888877764 667766 5577777
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEec
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAY 309 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~ 309 (456)
..++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+... +. ..+..+ +-+.| ++.|..
T Consensus 221 ~~~~~a~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 221 FDIPSSIRFARAMEPFGLL--WLEEPTPPENLDALAEVRRSTS-TPICAG-----EN--VYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp CCHHHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHhhcCCC--eEECCCChhhHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 7899999999999998876 56653 35778888888876 776543 21 224444 44455 666666
Q ss_pred cchH
Q 012815 310 PLSL 313 (456)
Q Consensus 310 p~~l 313 (456)
-..-
T Consensus 291 k~~~ 294 (410)
T 2qq6_A 291 DVAK 294 (410)
T ss_dssp BHHH
T ss_pred Cccc
Confidence 4443
No 196
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=94.42 E-value=4.5 Score=40.39 Aligned_cols=214 Identities=17% Similarity=0.084 Sum_probs=136.2
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS 150 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~ 150 (456)
+...+-|....+.+--+...|+++.-+++.+ ++.+.+.|.-.+-+.. ...|. .++..++.+++..+
T Consensus 13 n~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~-~y~g~---------~~~~~~~~~A~~~~ 82 (306)
T 3pm6_A 13 NRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAI-QYADS---------LLVRTAASACRAAS 82 (306)
T ss_dssp CSSHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHH-HHHTT---------HHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHH-hhccH---------HHHHHHHHHHHHCC
Confidence 3445567776776667889999998888765 5668888875543322 12332 35666777788889
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHh--------CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKA--------GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~A--------GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
+||..=.|.|. +. +.+++.+++ |...|.| |.. | .|.||=+++-+..++-++..|
T Consensus 83 VPVaLHlDHg~-~~----e~i~~ai~~~~~~~~~~GFtSVMi-DgS------~------~p~eENi~~Tk~vv~~ah~~g 144 (306)
T 3pm6_A 83 VPITLHLDHAQ-DP----EIIKRAADLSRSETHEPGFDSIMV-DMS------H------FSKEENLRLTRELVAYCNARG 144 (306)
T ss_dssp SCEEEEEEEEC-CH----HHHHHHHHTC------CCCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEcCCCC-CH----HHHHHHHHhhhhccCCCCCCEEEE-eCC------C------CCHHHHHHHHHHHHHHHHHcC
Confidence 99999999994 33 345666777 9999999 442 2 367888888888887765432
Q ss_pred CCeEEE------E-ecchh--------hcccHHHHHHHHHHhHhcCCCEEEe-----ccC-------CCHHHHHHHHHhC
Q 012815 223 SDIVIV------A-RTDSR--------QALSLEESLRRSRAFADAGADVLFI-----DAL-------ASKEEMKAFCEIS 275 (456)
Q Consensus 223 ~dfvIi------A-RTDA~--------~~~~ldeAI~RakAy~eAGAD~Ifi-----e~~-------~s~eei~~i~~~v 275 (456)
.-|= + --|.. .-..-+| |+.|.+.|.|++=+ +|. -+.+.++++.+.+
T Consensus 145 --vsVEaElG~igG~Edgv~~~~~~~~~yT~Pee----a~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v 218 (306)
T 3pm6_A 145 --IATEAEPGRIEGGEDGVQDTVDLEGVLTTPEE----SEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAV 218 (306)
T ss_dssp --CEEEECSSBCCCCBTTBCCCTTCCCBCCCHHH----HHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHH
T ss_pred --CeEEEEeeeeccccCCccccccccccCCCHHH----HHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHh
Confidence 1111 1 11110 0123444 55577899998753 232 1567888888877
Q ss_pred C-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHH
Q 012815 276 P-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDAL 325 (456)
Q Consensus 276 ~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l 325 (456)
+ .+|+. ++++...|.-...+.-++|+.-|=+...+..+..+++++.+
T Consensus 219 ~~~vpLV---lHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~~r~~~ 266 (306)
T 3pm6_A 219 GERVGLV---LHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKA 266 (306)
T ss_dssp TTTSEEE---ECSCTTCCHHHHHHHHHTTEEEEEESHHHHHHHHHHHHHHT
T ss_pred CCCCCEE---eeCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHh
Confidence 3 35543 45433223222344556899999999988888777776653
No 197
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=94.40 E-value=0.24 Score=50.32 Aligned_cols=150 Identities=15% Similarity=0.127 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhCccEEEeCCCC-----------CCCCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 167 VKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~-----------~pK~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
..+++++..++|.+||.|--.- ..||...-+| .+... .-..+-|+|++++. |++ .|..|.-..
T Consensus 155 f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGG-slenR~rf~~eiv~aVr~~v---g~~-~v~vRls~~ 229 (362)
T 4ab4_A 155 YRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGG-SLENRARLLLEVTDAAIEVW---GAQ-RVGVHLAPR 229 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHH---CGG-GEEEEECTT
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCC-chhhHHHHHHHHHHHHHHhc---CCC-ceEEEeecc
Confidence 3455567778999999996652 1233322233 12211 22333444444443 444 455564432
Q ss_pred h-------cccHHHHHHHHHHhHhcCCCEEEeccCC-CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC-CC
Q 012815 235 Q-------ALSLEESLRRSRAFADAGADVLFIDALA-SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FK 305 (456)
Q Consensus 235 ~-------~~~ldeAI~RakAy~eAGAD~Ifie~~~-s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v~ 305 (456)
. ....+++++-++++.++|+|.|-+.... ..+.++++.+.++ +|++.| ++-+| -..+++-+-| +.
T Consensus 230 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~----Ggit~-e~a~~~l~~g~aD 303 (362)
T 4ab4_A 230 ADAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFG-GPYIVN----ERFDK-ASANAALASGKAD 303 (362)
T ss_dssp CCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHC-SCEEEE----SSCCH-HHHHHHHHTTSCS
T ss_pred ccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCC-CCEEEe----CCCCH-HHHHHHHHcCCcc
Confidence 1 1236789999999999999999876532 1134566666666 687765 23221 1234444455 89
Q ss_pred EEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 306 LVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 306 ~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
.|.++-.++.-- +....+++|.
T Consensus 304 ~V~iGR~~lanP-----dl~~k~~~g~ 325 (362)
T 4ab4_A 304 AVAFGVPFIANP-----DLPARLAADA 325 (362)
T ss_dssp EEEESHHHHHCT-----THHHHHHTTC
T ss_pred EEEECHHhHhCc-----HHHHHHHcCC
Confidence 999887655432 3455666664
No 198
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=94.31 E-value=0.11 Score=51.14 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=70.1
Q ss_pred HHHHHHHhCCCceeec-ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh-ccC-CcEEE
Q 012815 79 KSLRQILELPGVHQGP-ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ-AVS-IPVIG 155 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~p-gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r-a~~-iPVIa 155 (456)
+.-++|.+ .+..++| +.-|..-|+.++++|.++|.--+.-+- +-.|+ .+ . +.++.|++ ..+ +|||+
T Consensus 115 ~aa~~L~k-~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIG-sG~Gi-----~~-~---~~L~~i~~~~~~~vPVI~ 183 (268)
T 2htm_A 115 KAAERLIE-EDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIG-SGWGV-----RT-R---ALLELFAREKASLPPVVV 183 (268)
T ss_dssp HHHHHHHH-TTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTT-TCCCS-----TT-H---HHHHHHHHTTTTSSCBEE
T ss_pred HHHHHHHH-CCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCc-CCccc-----CC-H---HHHHHHHHhcCCCCeEEE
Confidence 34445444 4577776 668999999999999999955232221 11222 22 2 23566666 567 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
|.|.+.+.+++ .+.+.||+||.+--.. |... ++..+++.++.|++|.+
T Consensus 184 --~GGI~tpsDAa----~AmeLGAdgVlVgSAI------~~a~----dP~~ma~af~~Av~agr 231 (268)
T 2htm_A 184 --DAGLGLPSHAA----EVMELGLDAVLVNTAI------AEAQ----DPPAMAEAFRLAVEAGR 231 (268)
T ss_dssp --ESCCCSHHHHH----HHHHTTCCEEEESHHH------HTSS----SHHHHHHHHHHHHHHHH
T ss_pred --eCCCCCHHHHH----HHHHcCCCEEEEChHH------hCCC----CHHHHHHHHHHHHHHHH
Confidence 46788887766 5567899999884433 1111 23455555555555543
No 199
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.29 E-value=1.1 Score=45.46 Aligned_cols=83 Identities=10% Similarity=0.126 Sum_probs=53.0
Q ss_pred HHHHHhHhcCCCEEEecc---------CCCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 244 RRSRAFADAGADVLFIDA---------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~---------~~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
+.|+...++|||+|.+.+ +++.+.+.++.+.+. .+|++++ +|-....+....-.+|.+.|..+..+
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 457888899999999832 345677888877763 3676543 34322233444456999999999887
Q ss_pred HHHHH----HHHHHHHHHHHc
Q 012815 314 IGVSV----RAMQDALTAIKG 330 (456)
Q Consensus 314 l~aa~----~A~~~~l~~i~~ 330 (456)
+.+.. ..+.+.++.|++
T Consensus 305 l~~l~~~G~~gv~~~l~~l~~ 325 (352)
T 3sgz_A 305 LWGLACKGEDGVKEVLDILTA 325 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHH
Confidence 76532 333445555543
No 200
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=94.29 E-value=0.37 Score=48.60 Aligned_cols=127 Identities=20% Similarity=0.300 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC--C---------CccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT--R---------GRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~--~---------gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
++....+.++++.++|..+++|- +||. + |...-+.+..+++|++++++. |+++.|. .
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik-------~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~---G~d~~l~--v 204 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFY-------PLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA---GPEIELM--V 204 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEEC-------CCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH---CTTSEEE--E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe-------cccccccccccccccCCcchhhHHHHHHHHHHHHHhc---CCCCEEE--E
Confidence 56778888899999999999983 2331 0 001123456677888877764 6677665 3
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-C
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-F 304 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v 304 (456)
|+.....++++++-++++.+.| ..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+. +++-+.| +
T Consensus 205 D~n~~~~~~~a~~~~~~l~~~~--i~~iE~P~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 205 DLSGGLTTDETIRFCRKIGELD--ICFVEEPCDPFDNGALKVISEQIP-LPIAVG-----ER--VYTRFGFRKIFELQAC 274 (392)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGC--EEEEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHTTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcC--CCEEECCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHcCCC
Confidence 6666678899999999998876 4577763 36788889998876 776643 21 1234 4444455 6
Q ss_pred CEEeccc
Q 012815 305 KLVAYPL 311 (456)
Q Consensus 305 ~~Vs~p~ 311 (456)
+.|..-.
T Consensus 275 d~v~ik~ 281 (392)
T 2poz_A 275 GIIQPDI 281 (392)
T ss_dssp SEECCCT
T ss_pred CEEecCc
Confidence 6666533
No 201
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=94.24 E-value=1 Score=46.20 Aligned_cols=152 Identities=20% Similarity=0.224 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+++++.+++|++||.|--.- .| ||...-+|- +... +-..+-|++++++. |++ .|..|.-
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGs-lenR~rf~~Eiv~aVr~av---g~~-~V~vRls 245 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-LANRCKFITQVVQAVVSAI---GAD-RVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHH---CGG-GEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcC-hhhhhHHHHHHHHHHHHHh---CCC-cEEEEec
Confidence 456677888889999999996531 12 333222332 2211 22334444444443 434 3455632
Q ss_pred hh-------hcccHHHHHHHHHHhHhcC------CCEEEeccC--------C---------CHHHHHHHHHhCCCCceee
Q 012815 233 SR-------QALSLEESLRRSRAFADAG------ADVLFIDAL--------A---------SKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 233 A~-------~~~~ldeAI~RakAy~eAG------AD~Ifie~~--------~---------s~eei~~i~~~v~~vP~~~ 282 (456)
.. ....++++++-++++.++| +|.|-+..- + ..+.++++.+.++ +|++.
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~-iPvi~ 324 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ-GTFIC 324 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS-SCEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC-CCEEE
Confidence 21 1234788999999999999 999987431 1 1234566777776 78776
Q ss_pred eeeccCCCCCCCCHHHHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 283 NMLEGGGKTPILNPLELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 283 N~~~~~g~tp~lt~~eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
| ++-+| -..+++-+-| +..|.++-.++.-- +....+++|.
T Consensus 325 ~----G~i~~-~~a~~~l~~g~aD~V~igR~~l~dP-----~l~~k~~~g~ 365 (402)
T 2hsa_B 325 S----GGYTR-ELGIEAVAQGDADLVSYGRLFISNP-----DLVMRIKLNA 365 (402)
T ss_dssp E----SSCCH-HHHHHHHHTTSCSEEEESHHHHHCT-----THHHHHHHTC
T ss_pred e----CCCCH-HHHHHHHHCCCCceeeecHHHHhCc-----hHHHHHHhCC
Confidence 5 23222 1234444455 99999987665432 3445555554
No 202
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=94.23 E-value=2.1 Score=41.36 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=89.5
Q ss_pred cCCcEEEeCCCCCCCH-HHHHHHHHHHH-HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE
Q 012815 149 VSIPVIGDGDNGYGNA-MNVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~-~nv~rtVk~l~-~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv 226 (456)
.+.||+.|.=.| +. ..+...++.+. +.|++.|++--- .| .+-+++++++. +...+
T Consensus 75 ~g~~VflDlK~~--DI~nTv~~~a~~~~~~lg~d~vTvh~~---------~G---------~~~l~~~~~~~---~~gv~ 131 (255)
T 3qw3_A 75 AGIPVVLDAKRG--DIADTADAYATSAFKHLNAHAITASPY---------MG---------SDSLQPFMRYP---DKAVF 131 (255)
T ss_dssp TTCCBEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCT---------TC---------HHHHHHHHTCT---TSEEE
T ss_pred CCCeEEEEeecC--CcHHHHHHHHHHHHHHcCCCEEEEccc---------CC---------HHHHHHHHHhh---CCceE
Confidence 479999998876 53 34556677775 699999998332 12 12455555542 34688
Q ss_pred EEEecchhhc-----c-----c-HHHHHHHHHH-hHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-C
Q 012815 227 IVARTDSRQA-----L-----S-LEESLRRSRA-FADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-I 293 (456)
Q Consensus 227 IiARTDA~~~-----~-----~-ldeAI~RakA-y~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~ 293 (456)
|.++|..... . . .+..+++++. +.++|.|.+++.+. ..+|++.+.+..+..++ ++ ||-.+ .
T Consensus 132 vL~~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at-~~~e~~~ir~~~~~~~~---l~--PGIg~qg 205 (255)
T 3qw3_A 132 VLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGAT-DPVALARVRARAPTLWF---LV--PGIGAQG 205 (255)
T ss_dssp EEEECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSS-CHHHHHHHHHHCSSCCE---EE--CCC----
T ss_pred EEEeCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCC-CHHHHHHHHHHCCCCeE---EE--CCcCCCC
Confidence 9999987531 1 1 4677788888 88899999998664 45788888887764332 23 33222 2
Q ss_pred CCHHHHHhcCCC------EEeccchHHH
Q 012815 294 LNPLELEELGFK------LVAYPLSLIG 315 (456)
Q Consensus 294 lt~~eL~elGv~------~Vs~p~~ll~ 315 (456)
-|+++..+.|.. +++.|-..+.
T Consensus 206 ~tp~~a~~~G~d~~~~~~livvGR~I~~ 233 (255)
T 3qw3_A 206 GSLKASLDAGLRADGSGMLINVSRGLAR 233 (255)
T ss_dssp -CHHHHHHHHCCTTSCCEEEEESHHHHT
T ss_pred CCHHHHHHcCCCcccCeeEEEeChhhcC
Confidence 378888888877 3666655553
No 203
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.22 E-value=0.27 Score=47.83 Aligned_cols=154 Identities=12% Similarity=0.094 Sum_probs=93.0
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
++.++++|++.|-+++...+ -=.|-. .+-.+.++.+.+..++|+.+=.. + .+.+++..++|+..
T Consensus 32 ~~~L~~~Gv~~IE~g~~~~~---~~~p~~-----~~~~e~~~~i~~~~~~~v~~l~~----n----~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 32 INRLSDCGYARIEATSFVSP---KWVPQL-----ADSREVMAGIRRADGVRYSVLVP----N----MKGYEAAAAAHADE 95 (295)
T ss_dssp HHHHTTTTCSEEEEEECSCT---TTCGGG-----TTHHHHHHHSCCCSSSEEEEECS----S----HHHHHHHHHTTCSE
T ss_pred HHHHHHcCcCEEEEccCcCc---cccccc-----cCHHHHHHHHHhCCCCEEEEEeC----C----HHHHHHHHHCCCCE
Confidence 45567789999998864311 111211 12234455665544677766542 3 45667788899999
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE-EEec-c--hhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI-VART-D--SRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI-iART-D--A~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
|+|-+..++ .|...+--.+.++.+++++.+++.+++.|..+.. +..+ + .......+++++-+++..++|||.|
T Consensus 96 V~i~~~~S~---~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 96 IAVFISASE---GFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp EEEEEESCH---HHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred EEEEEecCH---HHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 999664421 1322112347788999988888877766533220 1111 0 0122456888999999999999999
Q ss_pred Eec---cCCCHHHHHHHHHh
Q 012815 258 FID---ALASKEEMKAFCEI 274 (456)
Q Consensus 258 fie---~~~s~eei~~i~~~ 274 (456)
.+. |.-+++++.++.+.
T Consensus 173 ~l~Dt~G~~~P~~~~~lv~~ 192 (295)
T 1ydn_A 173 SLGDTIGRGTPDTVAAMLDA 192 (295)
T ss_dssp EEEETTSCCCHHHHHHHHHH
T ss_pred EecCCCCCcCHHHHHHHHHH
Confidence 875 34455565555543
No 204
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=94.20 E-value=0.64 Score=46.83 Aligned_cols=157 Identities=18% Similarity=0.260 Sum_probs=92.8
Q ss_pred HHHhCCcEEEecchHHhhhhcccCC-CCCCCHH---HHHHHHHHHHhcc-CCcEEEeC------CCCC-------C---C
Q 012815 105 VEKSGFSFCFTSGFSISAARLALPD-TGFISYG---EMVDQGQLITQAV-SIPVIGDG------DNGY-------G---N 163 (456)
Q Consensus 105 ~e~aGfdAI~vSG~avSas~lG~PD-~~~lt~~---Eml~~~r~I~ra~-~iPVIaD~------DtGY-------G---~ 163 (456)
+.+.|.++|.+=|.--. -.-| .+.-.++ =+...++.|.+.. ++-|+.|. ++|+ | |
T Consensus 68 ~~~~Gi~~v~LFgvp~~----~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~N 143 (330)
T 1pv8_A 68 LVEEGLRCVLIFGVPSR----VPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRA 143 (330)
T ss_dssp HHHHTCCEEEEEECC------------------CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHH
T ss_pred HHHCCCCEEEEecCCcc----cCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCcc
Confidence 34469998887443110 0011 1111222 2456677787776 48888886 3332 2 2
Q ss_pred HHHHHHH---HHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC-CC-eEEEEecc------
Q 012815 164 AMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SD-IVIVARTD------ 232 (456)
Q Consensus 164 ~~nv~rt---Vk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G-~d-fvIiARTD------ 232 (456)
.+.+... +-.+.+|||+-|-=-|- ++| ||.|++++-++.| .+ .-|.+-+-
T Consensus 144 D~Tl~~La~~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~G~~~~v~ImsYsaKyASaf 204 (330)
T 1pv8_A 144 EESRQRLAEVALAYAKAGCQVVAPSDM--------MDG-----------RVEAIKEALMAHGLGNRVSVMSYSAKFASCF 204 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECC----------CC-----------HHHHHHHHHHHTTCTTTCEEBCCCEECCCGG
T ss_pred HHHHHHHHHHHHHHHHcCCCeeecccc--------ccc-----------HHHHHHHHHHhCCCcCCceEeehhHHHhHhh
Confidence 2223333 34456899988876553 444 5556666555544 24 66766552
Q ss_pred ------hhh--------------cccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHHHHhCCCCceeeee
Q 012815 233 ------SRQ--------------ALSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEISPLVPKMANM 284 (456)
Q Consensus 233 ------A~~--------------~~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~v~~vP~~~N~ 284 (456)
+.. ...-+||++.+..=.+-|||+|+| |+++-.+-++++.+.+|.+|+.+=.
T Consensus 205 YGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYq 277 (330)
T 1pv8_A 205 YGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYH 277 (330)
T ss_dssp GHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGGHHHHHHHHHHSTTSCEEEEE
T ss_pred hhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCccHHHHHHHHHHhcCCCCeEEEE
Confidence 211 012689999999999999999999 7899999999999999778885433
No 205
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=94.16 E-value=0.68 Score=46.80 Aligned_cols=134 Identities=16% Similarity=0.205 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-----CCc-cccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-----RGR-KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-----~gk-~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
+++...+.++++.++|..+++|--.. ...-|.. ++. ..-+.++.+++|++++++. |+++.|.- |+...
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~-~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~---G~d~~l~v--Dan~~ 225 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVA-MDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAV---GPDVDIIA--EMHAF 225 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSS-BCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHH---CTTSEEEE--ECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccc-cCCcCccccCcccCCCchhHHHHHHHHHHHHHHhc---CCCCEEEE--ECCCC
Confidence 67788888999999999999983210 0000110 010 0112355677888777664 66776664 66666
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEec
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAY 309 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~ 309 (456)
..++++++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+... +. ..+. +++-+.| ++.|..
T Consensus 226 ~~~~~a~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 226 TDTTSAIQFGRMIEELGIF--YYEEPVMPLNPAQMKQVADKVN-IPLAAG-----ER--IYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp SCHHHHHHHHHHHGGGCCS--CEECSSCSSSHHHHHHHHHHCC-SCEEEC-----TT--CCHHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhcCCC--EEeCCCChhhHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 7889999999999999876 56653 36788899998876 776543 21 1234 4444455 666666
Q ss_pred cch
Q 012815 310 PLS 312 (456)
Q Consensus 310 p~~ 312 (456)
-..
T Consensus 296 k~~ 298 (407)
T 2o56_A 296 DIC 298 (407)
T ss_dssp CTT
T ss_pred Ccc
Confidence 443
No 206
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.06 E-value=2.8 Score=38.40 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHhccC--CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHH
Q 012815 133 ISYGEMVDQGQLITQAVS--IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMR 210 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~--iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~k 210 (456)
++.+++...++.+.+... .+++++- .+..+.++|+++||+.... .+.+ .
T Consensus 53 ~~~~~~~~~~~~l~~~~~~~~~l~v~~------------~~~~a~~~gad~v~l~~~~-------------~~~~----~ 103 (221)
T 1yad_A 53 KSAADILKLLDLIFEGGIDKRKLVMNG------------RVDIALFSTIHRVQLPSGS-------------FSPK----Q 103 (221)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGEEEES------------CHHHHHTTTCCEEEECTTS-------------CCHH----H
T ss_pred CCHHHHHHHHHHHHHhcCcCCeEEEeC------------hHHHHHHcCCCEEEeCCCc-------------cCHH----H
Confidence 688888888888766421 2577761 1245678999999995431 1222 2
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-----------CCHHHHHHHHHhCCCCc
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISPLVP 279 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~~vP 279 (456)
++.. . ++..+-..+. ..+ .++.+.++|||.|++..+ .+.+.++++.+.++ +|
T Consensus 104 ~~~~---~----~~~~ig~sv~-----t~~----~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~-~p 166 (221)
T 1yad_A 104 IRAR---F----PHLHIGRSVH-----SLE----EAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRIS-IP 166 (221)
T ss_dssp HHHH---C----TTCEEEEEEC-----SHH----HHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCC-SC
T ss_pred HHHH---C----CCCEEEEEcC-----CHH----HHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCC-CC
Confidence 2211 1 1344443321 223 355667899999988653 12356677766654 56
Q ss_pred eeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 280 KMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 280 ~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.+ .||-++ -+..++.+.|+..|..+..++.
T Consensus 167 via----~GGI~~-~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 167 VIA----IGGMTP-DRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp EEE----ESSCCG-GGHHHHHHTTCSEEEESHHHHT
T ss_pred EEE----ECCCCH-HHHHHHHHcCCCEEEEhHHhhC
Confidence 543 235433 4568888899999999988775
No 207
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.01 E-value=0.2 Score=49.77 Aligned_cols=130 Identities=18% Similarity=0.128 Sum_probs=84.3
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh----hcccHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR----QALSLEESLR 244 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~----~~~~ldeAI~ 244 (456)
+.+...+++||+=|.|-|... .+| ++|.-.. |+++++.. ..+..++-|--.- ....++.-.+
T Consensus 50 ~~a~~A~~gGAdRIELc~~l~------~GG--lTPS~g~---i~~a~~~~---~ipV~vMIRPRgGdF~Ys~~E~~~M~~ 115 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSGLS------EGG--TTPSMGV---LQVVKQSV---QIPVFVMIRPRGGDFLYSDREIEVMKA 115 (287)
T ss_dssp HHHHHHHHHTCSEEEECBCGG------GTC--BCCCHHH---HHHHHTTC---CSCEEEECCSSSSCSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCC------CCC--CCCCHHH---HHHHHHhc---CCCeEEEEecCCCCcccCHHHHHHHHH
Confidence 344567789999999976531 122 4554333 44444332 3567777774331 2345777888
Q ss_pred HHHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 245 RSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
+...+.++|||.|++-.+ -+.+.++++.+...+.++.++.--.--..|.-..++|.++||.+|....+
T Consensus 116 dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 116 DIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC 188 (287)
T ss_dssp HHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC
Confidence 999999999999998764 35677888887655566666543111112333468899999999999665
No 208
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=93.99 E-value=0.58 Score=47.25 Aligned_cols=140 Identities=14% Similarity=0.203 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-----CCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-----RGRK-VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-----~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
++....+.++++.+.|..+++|--... ..-|.. +|.. .-+.++.+++|++++++. |+++.|.- |+...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~-~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av---G~d~~l~v--Dan~~ 219 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAH-DRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV---GPDVDIIV--ENHGH 219 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSS-CTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH---CTTSEEEE--ECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccc-CCccccccCcccCCCchHHHHHHHHHHHHHHHHh---CCCCeEEE--ECCCC
Confidence 677888889999999999999853100 000110 1110 113355677888777664 66776653 66667
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-CCEEec
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAY 309 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v~~Vs~ 309 (456)
..++++++.++++.+.| ..|+|-+ .+.+.++++.+.++ +|+..+ +. ..+.+ ++-+.| ++.|..
T Consensus 220 ~~~~~ai~~~~~l~~~~--i~~iE~P~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 220 TDLVSAIQFAKAIEEFN--IFFYEEINTPLNPRLLKEAKKKID-IPLASG-----ER--IYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp SCHHHHHHHHHHHGGGC--EEEEECCSCTTSTHHHHHHHHTCC-SCEEEC-----TT--CCHHHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhhC--CCEEeCCCChhhHHHHHHHHHhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEec
Confidence 78899999999998886 4577763 25678889988876 776643 21 12444 444455 676666
Q ss_pred cchHHHHHH
Q 012815 310 PLSLIGVSV 318 (456)
Q Consensus 310 p~~ll~aa~ 318 (456)
-..-...-.
T Consensus 290 k~~~~GGit 298 (403)
T 2ox4_A 290 DLGTCGGFT 298 (403)
T ss_dssp CHHHHTHHH
T ss_pred CccccCCHH
Confidence 444333333
No 209
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=93.96 E-value=0.27 Score=49.90 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhCccEEEeCCCC--------CC---CCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecch
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQV--------SP---KGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTDS 233 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~--------~p---K~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTDA 233 (456)
...+++++.+++|.+||.|--.- .| ||...-+| .+... .-..+-|++++++. |++ .|..|.-.
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~v---g~~-~v~vRls~ 236 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVW---SAA-RVGVHLAP 236 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHH---CGG-GEEEEECT
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHc---CCC-eEEEeccc
Confidence 34556677788999999996642 12 33322233 12111 12334444444443 444 45556443
Q ss_pred hh-------cccHHHHHHHHHHhHhcCCCEEEeccCC-CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC-C
Q 012815 234 RQ-------ALSLEESLRRSRAFADAGADVLFIDALA-SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-F 304 (456)
Q Consensus 234 ~~-------~~~ldeAI~RakAy~eAGAD~Ifie~~~-s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v 304 (456)
.. ....+++++-++++.++|+|.|-+.... ..+.++++.+.++ +|++.| ++-+| -..+++-+.| +
T Consensus 237 ~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~-iPvi~~----Ggit~-e~a~~~l~~G~a 310 (361)
T 3gka_A 237 RGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFG-GPFIVN----ENFTL-DSAQAALDAGQA 310 (361)
T ss_dssp TCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHC-SCEEEE----SSCCH-HHHHHHHHTTSC
T ss_pred ccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcC-CCEEEe----CCCCH-HHHHHHHHcCCc
Confidence 21 1236789999999999999999876532 1134566666666 687765 23221 1234444455 8
Q ss_pred CEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 305 KLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 305 ~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
..|.++-.++.-- +....+++|.
T Consensus 311 D~V~iGR~~ladP-----dl~~k~~~g~ 333 (361)
T 3gka_A 311 DAVAWGKLFIANP-----DLPRRFKLNA 333 (361)
T ss_dssp SEEEESHHHHHCT-----THHHHHHHTC
T ss_pred cEEEECHHhHhCc-----HHHHHHHhCC
Confidence 9999887655432 3445566554
No 210
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=93.96 E-value=0.6 Score=46.91 Aligned_cols=127 Identities=13% Similarity=0.132 Sum_probs=90.7
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...+||-= |.. +.++-+++|++++++. ++.. =|.|+......
T Consensus 140 ~~~~~e~~~~~a~~~~~~G~~~iK~Kv-------g~~------~~~~d~~~v~avr~~~----~~~~--l~vDaN~~~~~ 200 (365)
T 3ik4_A 140 TAGDEVHAAASAKAILARGIKSIKVKT-------AGV------DVAYDLARLRAIHQAA----PTAP--LIVDGNCGYDV 200 (365)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCCEEEEC-------CSS------CHHHHHHHHHHHHHHS----SSCC--EEEECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEEe-------CCC------CHHHHHHHHHHHHHhC----CCCe--EEEECCCCCCH
Confidence 456788888889999999999999832 221 3567788999888775 3432 27799888889
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---lG-v~~Vs~p~~ 312 (456)
++|++.++++.+...+..|+|-+ .+.+.++++.+..+ +|+... .. ..+..++.+ .| ++.+..=+.
T Consensus 201 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~a~d~v~ik~~ 272 (365)
T 3ik4_A 201 ERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSG-FAVAAD-----ES--ARSAHDVLRIAREGTASVINIKLM 272 (365)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHhCCCCEEEEcCC
Confidence 99999999996666688999875 26788999998876 777643 11 245555443 45 666655444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
.
T Consensus 273 ~ 273 (365)
T 3ik4_A 273 K 273 (365)
T ss_dssp H
T ss_pred c
Confidence 4
No 211
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=93.94 E-value=0.88 Score=46.98 Aligned_cols=137 Identities=9% Similarity=0.124 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+.+++.+.+.++++.+.|..+++|--.. ..++-|+... .-+.++-+++|+|++++. |+++.|.. |+......
T Consensus 144 ~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~--~~~~~~d~e~v~avR~av---G~d~~L~v--Dan~~~t~ 216 (433)
T 3rcy_A 144 WTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPA--MTDISLSVEFCRKIRAAV---GDKADLLF--GTHGQFTT 216 (433)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCC--HHHHHHHHHHHHHHHHHH---TTSSEEEE--CCCSCBCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcc--hhhHHHHHHHHHHHHHHh---CCCCeEEE--eCCCCCCH
Confidence 3578889999999999999999994221 1111122110 113556678888887764 56776654 67677789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~~ 312 (456)
++|++-++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+. +++-+.| +..|..-..
T Consensus 217 ~~A~~~~~~Le~~~i~--~iEeP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 217 AGAIRLGQAIEPYSPL--WYEEPVPPDNVGAMAQVARAVR-IPVATG-----ER--LTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp HHHHHHHHHHGGGCCS--EEECCSCTTCHHHHHHHHHHSS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCHH
T ss_pred HHHHHHHHHhhhcCCC--EEECCCChhhHHHHHHHHhccC-CCEEec-----CC--CCCHHHHHHHHHcCCCCEEEeCch
Confidence 9999999999999865 55643 26788999999876 787643 21 2344 4455556 666655444
Q ss_pred HH
Q 012815 313 LI 314 (456)
Q Consensus 313 ll 314 (456)
-.
T Consensus 287 ~~ 288 (433)
T 3rcy_A 287 RA 288 (433)
T ss_dssp HH
T ss_pred hc
Confidence 33
No 212
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.89 E-value=2.6 Score=40.55 Aligned_cols=131 Identities=12% Similarity=0.048 Sum_probs=84.9
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc---ccHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA---LSLEESLRR 245 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~---~~ldeAI~R 245 (456)
..+++.++.||.+|.+=... | . -+.+++.+.+++++++.+..+..++++..-|.... .. ++.+.+
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~ni--g---~------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s-~~~i~~ 163 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYP--G---S------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETA-PEIVAY 163 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECT--T---S------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTC-HHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEec--C---C------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCC-HHHHHH
Confidence 45677888999999884422 1 1 12366777888888777666667877744321100 02 344555
Q ss_pred -HHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC-------HHHHHhcCCCEEeccchHHHH
Q 012815 246 -SRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILN-------PLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 246 -akAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt-------~~eL~elGv~~Vs~p~~ll~a 316 (456)
++...++|||.|-+....+.+.++++++..+.+|+.+ .||... -+ ..++.+.|..-++.+...+.+
T Consensus 164 a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~a----sGGi~~-~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 164 AARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVLM----SGGPKT-KTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSCEEE----ECCSCC-SSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHHHcCCCEEEEcCCCCHHHHHHHHHhCCCCeEEE----EeCCCC-CCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 6888999999998885447889999998875336432 234321 12 234447899999988877665
No 213
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=93.83 E-value=0.63 Score=43.61 Aligned_cols=140 Identities=16% Similarity=0.178 Sum_probs=80.1
Q ss_pred HHHHhccCCcEEE-eCCC---C-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHH
Q 012815 143 QLITQAVSIPVIG-DGDN---G-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDA 217 (456)
Q Consensus 143 r~I~ra~~iPVIa-D~Dt---G-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~A 217 (456)
+.+.+.+++||.+ |++. | |-+ ...+.++.++||++|.|-+. . ...|.+|..++++++++.
T Consensus 46 ~~v~~~~~~~v~aqd~~~~~~ga~tG----ei~~~~~~~~Gad~Vll~~s---------e--r~l~~~e~~~~~~~a~~~ 110 (219)
T 2h6r_A 46 RMIVENVNIPVYAQHIDNINPGSHTG----HILAEAIKDCGCKGTLINHS---------E--KRMLLADIEAVINKCKNL 110 (219)
T ss_dssp HHHHHHCCSCBEESCCCSCCSBSCTT----CCCHHHHHHHTCCEEEESBT---------T--BCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEECChhhcCCccC----chHHHHHHHcCCCEEEECCc---------c--ccCCHHHHHHHHHHHHHC
Confidence 3444555899999 7652 2 212 12236778899999999332 1 234566776676666544
Q ss_pred hHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC---------C-----HHHHHHHHHhCC-CCceee
Q 012815 218 RKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA---------S-----KEEMKAFCEISP-LVPKMA 282 (456)
Q Consensus 218 r~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~---------s-----~eei~~i~~~v~-~vP~~~ 282 (456)
|-..++..-+... .+|+ .+.|++.|.++... + .++..++.+.++ .+|+.
T Consensus 111 ----Gl~~iv~v~~~~e--------~~~~---~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii- 174 (219)
T 2h6r_A 111 ----GLETIVCTNNINT--------SKAV---AALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVL- 174 (219)
T ss_dssp ----TCEEEEEESSSHH--------HHHH---TTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEE-
T ss_pred ----CCeEEEEeCCchH--------HHHH---HhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEE-
Confidence 4444444433221 2333 45688999887532 1 234445555543 34433
Q ss_pred eeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 283 NMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 283 N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.++|-.+.=..+.+.+.|+.-++.|..++++
T Consensus 175 ---~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 175 ---CGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp ---ECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred ---EEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 2334332223455889999999999887765
No 214
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=93.82 E-value=0.69 Score=43.52 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=80.0
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
.+.+.|.....+-...+++.++.|+++|-+.=.. .| -..+ ..+.+.+.|++.+++.. ++.+--.-+.-
T Consensus 60 ~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~---g~-~~~~----~~~~~~~~i~~v~~a~~----pv~vKvi~e~~ 127 (225)
T 1mzh_A 60 IGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNL---SA-FKSE----KYDFVVEELKEIFRETP----SAVHKVIVETP 127 (225)
T ss_dssp ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCH---HH-HHTT----CHHHHHHHHHHHHHTCT----TSEEEEECCGG
T ss_pred ecCCCCccchhhhHHHHHHHHHcCCCEEEEEecH---HH-HhcC----ChHHHHHHHHHHHHHhc----CceEEEEEeCC
Confidence 3566675545554455678889999999853322 12 0011 12455566777776653 34443321111
Q ss_pred hcccHHHHHHHHHHhHhcCCCEEEecc-C----CCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEe
Q 012815 235 QALSLEESLRRSRAFADAGADVLFIDA-L----ASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (456)
Q Consensus 235 ~~~~ldeAI~RakAy~eAGAD~Ifie~-~----~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs 308 (456)
....++..+-++...++|||.|-.-. . .+.+.++.+.+.++ .+|+..+ ||-...-+..++-++|..+|-
T Consensus 128 -~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~----GGI~t~~da~~~l~aGA~~iG 202 (225)
T 1mzh_A 128 -YLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKAS----GGIRDLETAISMIEAGADRIG 202 (225)
T ss_dssp -GCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEE
T ss_pred -CCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEE----CCCCCHHHHHHHHHhCchHHH
Confidence 12345678889999999999995432 1 25678888887763 3676654 342211233445568999764
Q ss_pred cc
Q 012815 309 YP 310 (456)
Q Consensus 309 ~p 310 (456)
..
T Consensus 203 ~s 204 (225)
T 1mzh_A 203 TS 204 (225)
T ss_dssp ES
T ss_pred Hc
Confidence 43
No 215
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=93.80 E-value=0.72 Score=47.20 Aligned_cols=142 Identities=16% Similarity=0.169 Sum_probs=91.8
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
.+|+-+-. |..+++.+.+.++++.+.|...+|| -+..+. +... ...+.++-+++|+|++++. |+++.|.
T Consensus 114 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~--~~~~--~~~~~~~d~e~v~avR~av---G~d~~L~- 182 (405)
T 3rr1_A 114 KMRTYSWV--GGDRPADVIAGMKALQAGGFDHFKL-NGCEEM--GIID--TSRAVDAAVARVAEIRSAF---GNTVEFG- 182 (405)
T ss_dssp CEEEEEEC--CCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSS--SCBC--SHHHHHHHHHHHHHHHHTT---GGGSEEE-
T ss_pred ceeeeEeC--CCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcc--cccc--cchhHHHHHHHHHHHHHHh---CCCceEE-
Confidence 36765533 4456888999999999999999999 332110 0000 0113456678888887764 4566665
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHH---HhcC
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG 303 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL---~elG 303 (456)
.|+.....+++|++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+..++ -+.|
T Consensus 183 -vDaN~~~~~~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--i~~~~~~~~~l~~~ 251 (405)
T 3rr1_A 183 -LDFHGRVSAPMAKVLIKELEPYRPL--FIEEPVLAEQAETYARLAAHTH-LPIAAG-----ER--MFSRFDFKRVLEAG 251 (405)
T ss_dssp -EECCSCBCHHHHHHHHHHHGGGCCS--CEECSSCCSSTHHHHHHHTTCS-SCEEEC-----TT--CCSHHHHHHHHHHC
T ss_pred -EECCCCCCHHHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHhcCC-CCEEec-----CC--cCCHHHHHHHHHHh
Confidence 3777777899999999999998765 45543 25678889988876 777643 21 2345443 3345
Q ss_pred -CCEEeccchH
Q 012815 304 -FKLVAYPLSL 313 (456)
Q Consensus 304 -v~~Vs~p~~l 313 (456)
+..|..-..-
T Consensus 252 a~d~v~~d~~~ 262 (405)
T 3rr1_A 252 GVSILQPDLSH 262 (405)
T ss_dssp CCSEECCBTTT
T ss_pred CCCeEEEChhh
Confidence 6666664443
No 216
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.79 E-value=0.54 Score=48.48 Aligned_cols=98 Identities=11% Similarity=0.045 Sum_probs=60.2
Q ss_pred HHHHHHHHhC-CCceeecccCChHHHHHHHHhCCcEEEecc-hHHhhhhcccCC--CCCCCHHHHHHHHHHHHhccCCcE
Q 012815 78 AKSLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPD--TGFISYGEMVDQGQLITQAVSIPV 153 (456)
Q Consensus 78 a~~Lr~ll~~-~~~lv~pgayDalSArl~e~aGfdAI~vSG-~avSas~lG~PD--~~~lt~~Eml~~~r~I~ra~~iPV 153 (456)
.+.++++.+. +-++++.++.+.-.|+.++++|+|+|-++. .+ + ..+-.+ ....+.-+.+..+...++.+++||
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~G-s--~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPG-S--ICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC------------CCSCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred HHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCC-c--CcccccccccchhHHHHHHHHHHHHHhcCCCE
Confidence 4556666554 445666799999999999999999999952 11 1 111111 111333344445555555678999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
|+|.- ..+..++. ++.++||+||.+
T Consensus 250 IA~GG--I~~~~di~----kalalGAd~V~v 274 (400)
T 3ffs_A 250 IADGG--IRYSGDIG----KALAVGASSVMI 274 (400)
T ss_dssp EEESC--CCSHHHHH----HHHTTTCSEEEE
T ss_pred EecCC--CCCHHHHH----HHHHcCCCEEEE
Confidence 99843 33443443 566789999999
No 217
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=93.78 E-value=0.91 Score=45.39 Aligned_cols=158 Identities=13% Similarity=0.066 Sum_probs=90.7
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhcc--CCcEEEeCCC------C
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAV--SIPVIGDGDN------G 160 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~--~iPVIaD~Dt------G 160 (456)
-.|+.+.++|||+|=+= ||-+.-. ..-.-|.---+++. +++.+++|++++ +.||.+.+.. |
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 46788888999999875 3333211 01122321124553 355667777777 6899885543 3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+ +.++..+.++.++++|++.|++-... .+.. .....+-.. -+++.+|+.++ +..++.+++...
T Consensus 236 ~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~--~~~~~~~~~-~~~~~~ir~~~------~iPVi~~Ggi~t------ 299 (349)
T 3hgj_A 236 W-SLEDTLAFARRLKELGVDLLDCSSGGVVLRV--RIPLAPGFQ-VPFADAVRKRV------GLRTGAVGLITT------ 299 (349)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECCCSCSSS--CCCCCTTTT-HHHHHHHHHHH------CCEEEECSSCCC------
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecCCcCccc--ccCCCcccc-HHHHHHHHHHc------CceEEEECCCCC------
Confidence 2 35678889999999999999997532 1110 000001111 23455554332 334454444321
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.+..+.+.| ||+|.+-. +.+++..+++.+.+.
T Consensus 300 ---~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 300 ---PEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp ---HHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred ---HHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 24456677788 99998843 345567788887764
No 218
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=93.77 E-value=1 Score=42.65 Aligned_cols=152 Identities=11% Similarity=0.024 Sum_probs=89.9
Q ss_pred cCC-cEEEeCCCCCCCHH-HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE
Q 012815 149 VSI-PVIGDGDNGYGNAM-NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (456)
Q Consensus 149 ~~i-PVIaD~DtGYG~~~-nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv 226 (456)
.+. +|++|.=.+ +.- .+...++.+.+. +.+++--- .|+ .. -|++++++.++.+...+
T Consensus 51 ~~~~~VflDlK~~--DI~nTv~~~~~~~~~~--d~vTVh~~-----~G~---~~---------~~~~a~~~~~~~~~~v~ 109 (222)
T 4dbe_A 51 LDVEEIIVDFKLA--DIGYIMKSIVERLSFA--NSFIAHSF-----IGV---KG---------SLDELKRYLDANSKNLY 109 (222)
T ss_dssp CCCSEEEEEEEEC--SCHHHHHHHHTTCTTC--SEEEEEST-----TCT---TT---------THHHHHHHHHHTTCEEE
T ss_pred cCCCeEEEEeeec--chHHHHHHHHHHHHhC--CEEEEEcC-----cCc---HH---------HHHHHHHHHHhcCCcEE
Confidence 478 999998865 532 344444443333 55555221 111 11 24445555444345677
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-CCCHHHHHhcCCC
Q 012815 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELEELGFK 305 (456)
Q Consensus 227 IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~elGv~ 305 (456)
+...++......+ ...++++...++|+|.+++.+ +..++++.+.+..+. .+-++ ||-.| .-++++.-+.|.+
T Consensus 110 vLts~s~~~~~~~-~~~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~~---~~~vt--PGI~~~g~tp~~a~~~Gad 182 (222)
T 4dbe_A 110 LVAVMSHEGWSTL-FADYIKNVIREISPKGIVVGG-TKLDHITQYRRDFEK---MTIVS--PGMGSQGGSYGDAVCAGAD 182 (222)
T ss_dssp EEEECSSTTCCCT-THHHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCTT---CEEEE--CCBSTTSBCTTHHHHHTCS
T ss_pred EEEeCCCcchHHH-HHHHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCCC---CEEEc--CCcccCccCHHHHHHcCCC
Confidence 8889887543221 126788888899999998765 335788888877663 22233 33333 2267788899999
Q ss_pred EEeccchHHHHH--HHHHHHHHHHH
Q 012815 306 LVAYPLSLIGVS--VRAMQDALTAI 328 (456)
Q Consensus 306 ~Vs~p~~ll~aa--~~A~~~~l~~i 328 (456)
.++.|-..+.+. ..|.+...++|
T Consensus 183 ~iVVGR~I~~A~dP~~aa~~i~~~i 207 (222)
T 4dbe_A 183 YEIIGRSIYNAGNPLTALRTINKII 207 (222)
T ss_dssp EEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred EEEECHHhcCCCCHHHHHHHHHHHH
Confidence 999988777652 33444444444
No 219
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.77 E-value=1.4 Score=43.01 Aligned_cols=151 Identities=11% Similarity=0.156 Sum_probs=94.4
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
++.++++|++.|-++++... ...|-.. ...++ ++.+.+..++|+.+=.+ + .+.+++.+++|+..
T Consensus 36 ~~~L~~~Gv~~IE~g~~~~~---~~~~~~~--d~~~~---~~~~~~~~~~~~~~l~~----~----~~~i~~a~~aG~~~ 99 (302)
T 2ftp_A 36 VDDLSAAGLDYIEVGSFVSP---KWVPQMA--GSAEV---FAGIRQRPGVTYAALAP----N----LKGFEAALESGVKE 99 (302)
T ss_dssp HHHHHHTTCSEEEEEECSCT---TTCGGGT--THHHH---HHHSCCCTTSEEEEECC----S----HHHHHHHHHTTCCE
T ss_pred HHHHHHcCcCEEEECCCcCc---ccccccc--CHHHH---HHHhhhcCCCEEEEEeC----C----HHHHHHHHhCCcCE
Confidence 56678899999998863311 1223221 23333 45555555677766542 3 35566777899999
Q ss_pred EEeCCCCCCCCccCCCCccc-cCHHHHHHHHHHHHHHhHhhCCCeEEEEe---c---chhhcccHHHHHHHHHHhHhcCC
Q 012815 182 IILEDQVSPKGCGHTRGRKV-VSREEAVMRIKAAVDARKESGSDIVIVAR---T---DSRQALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~l-vp~ee~v~kI~AA~~Ar~~~G~dfvIiAR---T---DA~~~~~ldeAI~RakAy~eAGA 254 (456)
|+|-|..++ -|.. +.+ .+.+|.+++++.+++..++.|. .|.+- + ........+++++-+++..++||
T Consensus 100 v~i~~~~s~---~~~~-~~~~~s~ee~l~~~~~~v~~a~~~G~--~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~ 173 (302)
T 2ftp_A 100 VAVFAAASE---AFSQ-RNINCSIKDSLERFVPVLEAARQHQV--RVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGC 173 (302)
T ss_dssp EEEEEESCH---HHHH-HHHSSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTC
T ss_pred EEEEEecCH---HHHH-HHhCCCHHHHHHHHHHHHHHHHHCCC--eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCC
Confidence 999776531 1111 111 5789999999999888877553 33211 1 10123467899999999999999
Q ss_pred CEEEec---cCCCHHHHHHHHHh
Q 012815 255 DVLFID---ALASKEEMKAFCEI 274 (456)
Q Consensus 255 D~Ifie---~~~s~eei~~i~~~ 274 (456)
|.|.+. |.-.++++.++.+.
T Consensus 174 d~i~l~DT~G~~~P~~~~~lv~~ 196 (302)
T 2ftp_A 174 YEVSLGDTIGVGTAGATRRLIEA 196 (302)
T ss_dssp SEEEEEESSSCCCHHHHHHHHHH
T ss_pred CEEEEeCCCCCcCHHHHHHHHHH
Confidence 999875 34555666555544
No 220
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=93.73 E-value=0.45 Score=48.16 Aligned_cols=137 Identities=14% Similarity=0.084 Sum_probs=90.7
Q ss_pred CCcEEEeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
.+|+.+- .+ .+++....+.++++.++|..+++|-- |. .++ +. +..+++|++++++. |+++.|
T Consensus 133 ~vp~~~~--~~~~~~~~~~~~~a~~~~~~Gf~~iKik~------sp-vG~----~~~~~~~e~v~avr~a~---G~d~~l 196 (401)
T 2hzg_A 133 GKRPYAS--LLFGDTPQETLERARAARRDGFAAVKFGW------GP-IGR----GTVAADADQIMAAREGL---GPDGDL 196 (401)
T ss_dssp CBEEEEE--EECCSSHHHHHHHHHHHHHTTCSEEEEES------TT-TTS----SCHHHHHHHHHHHHHHH---CSSSEE
T ss_pred ceEeeEE--cCCCCCHHHHHHHHHHHHHhCCCeEEEcC------CC-CCC----CHHHHHHHHHHHHHHHh---CCCCeE
Confidence 4676542 22 24677888889999999999999831 21 121 23 55678888887764 567666
Q ss_pred EEecchhhcc--cHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHH-hCCCCceeeeeeccCCCCCCCCHHHH--
Q 012815 228 VARTDSRQAL--SLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCE-ISPLVPKMANMLEGGGKTPILNPLEL-- 299 (456)
Q Consensus 228 iARTDA~~~~--~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~-~v~~vP~~~N~~~~~g~tp~lt~~eL-- 299 (456)
. .|+.... .++++++.++++.+.|.+ |+|-+ .+.+.++++.+ .++ +|+..+ +. ..+.+++
T Consensus 197 ~--vDan~~~~~~~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~~-iPI~~d-----E~--~~~~~~~~~ 264 (401)
T 2hzg_A 197 M--VDVGQIFGEDVEAAAARLPTLDAAGVL--WLEEPFDAGALAAHAALAGRGAR-VRIAGG-----EA--AHNFHMAQH 264 (401)
T ss_dssp E--EECTTTTTTCHHHHHTTHHHHHHTTCS--EEECCSCTTCHHHHHHHHTTCCS-SEEEEC-----TT--CSSHHHHHH
T ss_pred E--EECCCCCCCCHHHHHHHHHHHHhcCCC--EEECCCCccCHHHHHHHHhhCCC-CCEEec-----CC--cCCHHHHHH
Confidence 5 3776777 889999999999999877 45653 36778888888 765 676543 21 2344443
Q ss_pred -HhcC-CCEEeccchHH
Q 012815 300 -EELG-FKLVAYPLSLI 314 (456)
Q Consensus 300 -~elG-v~~Vs~p~~ll 314 (456)
-+.| ++.|..-..-.
T Consensus 265 ~i~~~~~d~v~ik~~~~ 281 (401)
T 2hzg_A 265 LMDYGRIGFIQIDCGRI 281 (401)
T ss_dssp HHHHSCCSEEEECHHHH
T ss_pred HHHCCCCCEEEeCcchh
Confidence 3334 78777755443
No 221
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.73 E-value=1.1 Score=40.57 Aligned_cols=65 Identities=20% Similarity=0.096 Sum_probs=40.4
Q ss_pred HHHhHhcCCCEEEecc--CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 246 SRAFADAGADVLFIDA--LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 246 akAy~eAGAD~Ifie~--~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
++...++|||+|-+.. ....+.++++.+.++.+|+. ..||-++ -+..++.++|+..|..+..++.
T Consensus 117 ~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvi----a~GGI~~-~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 117 LVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFV----PTGGVNL-DNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEE----EBSSCCT-TTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEE----EcCCCCH-HHHHHHHHCCCCEEEECccccC
Confidence 3344566777665432 11234556666655435543 2345554 4889999999999999987765
No 222
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=93.70 E-value=0.7 Score=46.76 Aligned_cols=136 Identities=14% Similarity=0.191 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC----------CCcc-ccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT----------RGRK-VVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~----------~gk~-lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
++....+.++++.++|..+++|--.. ...-|.. +|-. .-+.+..+++|++++++. |+++.|.-
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~-~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~---G~d~~l~v-- 223 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLE-IDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM---GDDADIIV-- 223 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSS-BCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH---CSSSEEEE--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccc-cCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc---CCCCEEEE--
Confidence 67788888999999999999985310 0000110 1100 013456677888877764 66776653
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCC-CCCHHHHHhcC-CCE
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELEELG-FKL 306 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~elG-v~~ 306 (456)
|+.....++++++-++++.+.| +.|+|-+ .+.+.++++.+.++ +|+..+ +..- .-..+++-+.| ++.
T Consensus 224 Dan~~~~~~~ai~~~~~l~~~~--i~~iE~P~~~~~~~~~~~l~~~~~-iPIa~d-----E~~~~~~~~~~~i~~~~~d~ 295 (410)
T 2gl5_A 224 EIHSLLGTNSAIQFAKAIEKYR--IFLYEEPIHPLNSDNMQKVSRSTT-IPIATG-----ERSYTRWGYRELLEKQSIAV 295 (410)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGC--EEEEECSSCSSCHHHHHHHHHHCS-SCEEEC-----TTCCTTHHHHHHHHTTCCSE
T ss_pred ECCCCCCHHHHHHHHHHHHhcC--CCeEECCCChhhHHHHHHHHhhCC-CCEEec-----CCcCCHHHHHHHHHcCCCCE
Confidence 6666677899999999998886 4577753 36788899998876 777643 2111 11234554555 676
Q ss_pred Eeccch
Q 012815 307 VAYPLS 312 (456)
Q Consensus 307 Vs~p~~ 312 (456)
|..-..
T Consensus 296 v~ik~~ 301 (410)
T 2gl5_A 296 AQPDLC 301 (410)
T ss_dssp ECCCTT
T ss_pred EecCcc
Confidence 666443
No 223
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=93.65 E-value=0.78 Score=46.53 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcc-cHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-SLEESLR 244 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~-~ldeAI~ 244 (456)
.+.+.++++.+.|...+|| + +.|+. -.+.++-+++|++++++. |+++.|.. |+.... .+++|++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~-~-----k~g~~----~~~~~~d~~~v~avR~a~---G~d~~l~v--Dan~~~~~~~~A~~ 219 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKV-C-----IIPND----KVSDKEIVAYLRELREVI---GWDMDMMV--DCLYRWTDWQKARW 219 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----CCCCT----TSCHHHHHHHHHHHHHHH---CSSSEEEE--ECTTCCSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEe-c-----ccCCC----ccCHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCCHHHHHH
Confidence 4566788888999999999 2 22321 124577788999888774 67776654 777777 8899999
Q ss_pred HHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..
T Consensus 220 ~~~~L~~~~i~--~iEeP~~~~~~~~~~~l~~~~~-iPIa~ 257 (394)
T 3mqt_A 220 TFRQLEDIDLY--FIEACLQHDDLIGHQKLAAAIN-TRLCG 257 (394)
T ss_dssp HHHHTGGGCCS--EEESCSCTTCHHHHHHHHHHSS-SEEEE
T ss_pred HHHHHhhcCCe--EEECCCCcccHHHHHHHHhhCC-CCEEe
Confidence 99999999866 45543 26788899998876 77664
No 224
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=93.62 E-value=0.66 Score=47.20 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC-CCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G-~dfvIiARTDA~~~~~ 238 (456)
|.++++.+.+.++++.+.|...+||-= |. .+.++-+++|++++++. | +++.| |.|+.....
T Consensus 161 ~~~~~e~~~~~a~~~~~~G~~~~KlKv-------g~------~~~~~d~~~v~avR~a~---gg~~~~L--~vDaN~~w~ 222 (391)
T 4e8g_A 161 GIGQPDEIARIAAEKVAEGFPRLQIKI-------GG------RPVEIDIETVRKVWERI---RGTGTRL--AVDGNRSLP 222 (391)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEEC-------CS------SCHHHHHHHHHHHHHHH---TTTTCEE--EEECTTCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEcC-------CC------CCHHHHHHHHHHHHHHh---CCCCCeE--EEeCCCCCC
Confidence 456788888999999999999999832 22 13456678888887764 4 56554 458888888
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-CCEEeccchH
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPLSL 313 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v~~Vs~p~~l 313 (456)
.++|++.++++.+. +. |+|-+ .+.+.++++.+..+ +|+..+ .. ..+.. ++-+.| +..+..-..-
T Consensus 223 ~~~A~~~~~~L~~~--~i-~iEeP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~a~d~v~ik~~~ 291 (391)
T 4e8g_A 223 SRDALRLSRECPEI--PF-VLEQPCNTLEEIAAIRGRVQ-HGIYLD-----ES--GEDLSTVIRAAGQGLCDGFGMKLTR 291 (391)
T ss_dssp HHHHHHHHHHCTTS--CE-EEESCSSSHHHHHHHGGGCC-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred HHHHHHHHHHHhhc--Ce-EEecCCccHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHcCCCCEEEeCccc
Confidence 99999999999887 55 88875 57788999988876 787654 11 23444 444456 6666554443
No 225
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=93.62 E-value=1.1 Score=42.79 Aligned_cols=184 Identities=11% Similarity=0.116 Sum_probs=104.0
Q ss_pred HHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 105 VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 105 ~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
+.++|.|+|.++| ...++.+++.+.+++|.+ +++|++. ..|+ +..+ ..|++|+.+
T Consensus 27 ~~~~GtD~i~vGG------------s~gvt~~~~~~~v~~ik~-~~~Pvvl--fp~~--~~~v--------~~gaD~~l~ 81 (228)
T 3vzx_A 27 LCESGTDAVIIGG------------SDGVTEDNVLRMMSKVRR-FLVPCVL--EVSA--IEAI--------VPGFDLYFI 81 (228)
T ss_dssp HHTSSCSEEEECC------------CSCCCHHHHHHHHHHHTT-SSSCEEE--ECSC--GGGC--------CSCCSEEEE
T ss_pred HHHcCCCEEEECC------------cCCCCHHHHHHHHHHhhc-cCCCEEE--eCCC--HHHc--------cccCCEEEE
Confidence 3578999999998 223688999999999998 8999998 2232 3222 269999998
Q ss_pred CCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH-----h-hCCCeEEEEecchhh-------cccHHHHHHHHHHhHh
Q 012815 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK-----E-SGSDIVIVARTDSRQ-------ALSLEESLRRSRAFAD 251 (456)
Q Consensus 185 EDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~-----~-~G~dfvIiARTDA~~-------~~~ldeAI~RakAy~e 251 (456)
=+=......-.. +-. + ++++++... + ....++|++-+-+.+ ....+++...|.+..-
T Consensus 82 pslln~~~~~~i-----~g~--~---~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~ 151 (228)
T 3vzx_A 82 PSVLNSKNADWI-----VGM--H---QKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSEL 151 (228)
T ss_dssp EEETTBSSGGGT-----THH--H---HHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHH
T ss_pred eeecCCCCcchh-----hhH--H---HHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHH
Confidence 664321111111 111 1 122222221 1 111244443322211 1133444444444445
Q ss_pred cCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHH
Q 012815 252 AGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAI 328 (456)
Q Consensus 252 AGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i 328 (456)
.|-..|++++. .+.+.++++.+..+.+|+.+ .+|=++| =..+++. .|+..|+.|+.+.+- ...+++..+++
T Consensus 152 ~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~v---GGGI~t~-e~a~~~~-~gAD~VVVGSa~v~~-p~~~~~~v~a~ 225 (228)
T 3vzx_A 152 LQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFY---GGGIKDA-ETAKQYA-EHADVIVVGNAVYED-FDRALKTVAAV 225 (228)
T ss_dssp TTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEE---ESSCCSH-HHHHHHH-TTCSEEEECTHHHHC-HHHHHHHHHHH
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEEE---eCCCCCH-HHHHHHH-hCCCEEEEChHHhcC-HHHHHHHHHHH
Confidence 56799999862 35778899988873256542 2321221 1234555 699999999987763 33444555555
Q ss_pred H
Q 012815 329 K 329 (456)
Q Consensus 329 ~ 329 (456)
+
T Consensus 226 ~ 226 (228)
T 3vzx_A 226 K 226 (228)
T ss_dssp H
T ss_pred h
Confidence 4
No 226
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=93.57 E-value=0.32 Score=49.31 Aligned_cols=142 Identities=13% Similarity=0.053 Sum_probs=85.8
Q ss_pred HHHHHH---HhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012815 101 SAKLVE---KSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (456)
Q Consensus 101 SArl~e---~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~ 176 (456)
.|+.++ +.|+|+|=+= |--. .-|..+.+ ...+.+.+.++.+.+++++||++=+--++ +..++.+.++.+.+
T Consensus 144 ~a~~l~~~~~~g~d~ielNisCPn---~~gg~~l~-~~~e~~~~il~av~~~~~~PV~vKi~p~~-d~~~~~~~a~~~~~ 218 (354)
T 4ef8_A 144 MCKRLAAVATEKGVILELNLSCPN---VPGKPQVA-YDFDAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNE 218 (354)
T ss_dssp HHHHHHHHHHHHCCEEEEECSSCC---STTSCCGG-GSHHHHHHHHHHHHHHCCSCEEEEECCCC-SHHHHHHHHHHHHT
T ss_pred HHHHHhhhhhcCCCEEEEeCCCCC---CCCchhhc-cCHHHHHHHHHHHHHhhCCCeEEEecCCC-CHHHHHHHHHHHHh
Confidence 356666 5688887654 2111 12333322 24566677778888888999999988876 66778888888889
Q ss_pred hC-ccEEEeCCCC-----------C----CC-CccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 177 AG-FAGIILEDQV-----------S----PK-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 177 AG-aaGI~IEDq~-----------~----pK-~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+| ++||.+-... . |+ .-|-..|+++-|.. .+.|+.++++ .+++-|++--+-...
T Consensus 219 ~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a--~~~i~~v~~~----~~~ipII~~GGI~s~--- 289 (354)
T 4ef8_A 219 FPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTA--LANINAFYRR----CPGKLIFGCGGVYTG--- 289 (354)
T ss_dssp CTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHH--HHHHHHHHHH----CTTSEEEEESCCCSH---
T ss_pred CCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHH--HHHHHHHHHh----CCCCCEEEECCcCCH---
Confidence 98 9999752211 0 11 11223355555543 3444444443 235677766654432
Q ss_pred HHHHHHHHHhHhcCCCEEEec
Q 012815 240 EESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie 260 (456)
+.+..+.++|||+|.+-
T Consensus 290 ----~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 290 ----EDAFLHVLAGASMVQVG 306 (354)
T ss_dssp ----HHHHHHHHHTEEEEEEC
T ss_pred ----HHHHHHHHcCCCEEEEh
Confidence 33455567999999974
No 227
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=93.54 E-value=2.2 Score=42.81 Aligned_cols=138 Identities=14% Similarity=0.096 Sum_probs=79.5
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhhhcccC------CCCCCCHHH----HHHHHHHHHhcc--CCcEEEeC-----CC
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAARLALP------DTGFISYGE----MVDQGQLITQAV--SIPVIGDG-----DN 159 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas~lG~P------D~~~lt~~E----ml~~~r~I~ra~--~iPVIaD~-----Dt 159 (456)
-.|+.+.++|||+|=+= ||-+. .+.-| |.--=+++. +++.+++|++++ +.||.+-+ ..
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~--qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~ 224 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIH--EFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYME 224 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHH--HHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSST
T ss_pred HHHhhccccCCceEEEecccchhHH--HhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhc
Confidence 46788888999999886 44443 22333 311114442 355677777777 58998843 32
Q ss_pred CCC-CHHHHHHHHHHHHHhCccEEEeC-CCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcc
Q 012815 160 GYG-NAMNVKRTVKGYIKAGFAGIILE-DQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL 237 (456)
Q Consensus 160 GYG-~~~nv~rtVk~l~~AGaaGI~IE-Dq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~ 237 (456)
| | +..+..+.++.++++ ++.|++- ....++..-...+ . .-+++.+|+.++ +..++.+++...
T Consensus 225 ~-g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~---~-~~~~~~~ir~~~------~iPVi~~Ggi~t---- 288 (343)
T 3kru_A 225 G-GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPG---Y-QVKYAETIKKRC------NIKTSAVGLITT---- 288 (343)
T ss_dssp T-SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTT---T-THHHHHHHHHHH------TCEEEEESSCCC----
T ss_pred c-CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCc---e-eehHHHHHHHhc------CcccceeeeeeH----
Confidence 2 3 356788899999999 9999993 3322110000001 1 123455554432 245566665322
Q ss_pred cHHHHHHHHHHhHhcC-CCEEEec
Q 012815 238 SLEESLRRSRAFADAG-ADVLFID 260 (456)
Q Consensus 238 ~ldeAI~RakAy~eAG-AD~Ifie 260 (456)
.+.+..+.+.| ||+|.+-
T Consensus 289 -----~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 289 -----QELAEEILSNERADLVALG 307 (343)
T ss_dssp -----HHHHHHHHHTTSCSEEEES
T ss_pred -----HHHHHHHHhchhhHHHHHH
Confidence 13455666677 9999874
No 228
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.50 E-value=0.48 Score=47.54 Aligned_cols=88 Identities=14% Similarity=0.137 Sum_probs=57.0
Q ss_pred HHHHHHHhCCcEEEecc-hHHhhhh-cccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCC---HHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSG-FSISAAR-LALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGN---AMNVKRTVKGYI 175 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG-~avSas~-lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~---~~nv~rtVk~l~ 175 (456)
.|+.++++|||.|=+-. ....... -|+-..-.-..+-+.+.++.+.+++++||++=+-.|+-+ ..+..+.++.++
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~ 154 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMA 154 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHH
Confidence 46677788999998762 1111110 111111112455566677788887899999955555432 356788889999
Q ss_pred HhCccEEEeCCCC
Q 012815 176 KAGFAGIILEDQV 188 (456)
Q Consensus 176 ~AGaaGI~IEDq~ 188 (456)
++|+++|++.+..
T Consensus 155 ~aG~d~I~V~~r~ 167 (350)
T 3b0p_A 155 EAGVKVFVVHARS 167 (350)
T ss_dssp HTTCCEEEEECSC
T ss_pred HcCCCEEEEecCc
Confidence 9999999997753
No 229
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.48 E-value=0.25 Score=50.33 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=60.4
Q ss_pred HHHHHHhC-CCc-eeecccCChHHHHHHHHhCCcEEEecc-h-HHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 80 SLRQILEL-PGV-HQGPACFDALSAKLVEKSGFSFCFTSG-F-SISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 80 ~Lr~ll~~-~~~-lv~pgayDalSArl~e~aGfdAI~vSG-~-avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.++++.+. ++. +++-++.+.-.|+.++++|+|+|.++. - ..... ....+.+ .+.-+.+..+...++.+++|||+
T Consensus 139 ~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~t-r~~~g~g-~p~~~~l~~v~~~~~~~~iPVIA 216 (366)
T 4fo4_A 139 RIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTT-RIVTGVG-VPQITAIADAAGVANEYGIPVIA 216 (366)
T ss_dssp HHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCH-HHHHCCC-CCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCc-ccccCcc-cchHHHHHHHHHHHhhcCCeEEE
Confidence 34454443 233 445569999999999999999999951 1 11000 0111112 23334455566666778999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
|. |..++.++. ++..+||++|.+=-
T Consensus 217 ~G--GI~~~~di~----kala~GAd~V~vGs 241 (366)
T 4fo4_A 217 DG--GIRFSGDIS----KAIAAGASCVMVGS 241 (366)
T ss_dssp ES--CCCSHHHHH----HHHHTTCSEEEEST
T ss_pred eC--CCCCHHHHH----HHHHcCCCEEEECh
Confidence 83 333444443 56668999999943
No 230
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.41 E-value=4 Score=41.07 Aligned_cols=69 Identities=14% Similarity=0.155 Sum_probs=48.4
Q ss_pred HHHHHhHhcCCCEEEec--c-------CCCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 244 RRSRAFADAGADVLFID--A-------LASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie--~-------~~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
+.++...++|||.|.+- + .++.+.+.++.+.++ .+|++.+ +|-...-+..++-++|.+.|..+..+
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr~~ 312 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGRPV 312 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecHHH
Confidence 44678889999999983 2 245667888888774 3676544 34322234566667999999999988
Q ss_pred HHH
Q 012815 314 IGV 316 (456)
Q Consensus 314 l~a 316 (456)
+..
T Consensus 313 l~~ 315 (370)
T 1gox_A 313 VFS 315 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 231
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.40 E-value=0.2 Score=52.83 Aligned_cols=119 Identities=18% Similarity=0.248 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~R 245 (456)
+..+.++.++++|++.|.|.-. |||. +...+.|+.++++. ++..|++-+- .. .+-
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a-----~g~~--------~~~~~~i~~ir~~~----p~~~Vi~g~v----~t----~e~ 285 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSS-----HGHS--------EGVLQRIRETRAAY----PHLEIIGGNV----AT----AEG 285 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECS-----CTTS--------HHHHHHHHHHHHHC----TTCCEEEEEE----CS----HHH
T ss_pred chHHHHHHHHhccCceEEeccc-----cccc--------hHHHHHHHHHHHHC----CCceEEEccc----Cc----HHH
Confidence 3466778899999999999432 5553 23344455444432 3444444211 11 244
Q ss_pred HHHhHhcCCCEEEec---------------cCCCHHHHHHHHH---hCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 246 SRAFADAGADVLFID---------------ALASKEEMKAFCE---ISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i~~---~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
++++.++|||+|.+. +.+..+.+.++++ ... +|++++ ||-...-....+-++|...|
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~-iPVIa~----GGI~~~~di~kala~GAd~V 360 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG-IPVIAD----GGIRFSGDISKAIAAGASCV 360 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT-CCEEEE----SCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC-CeEEEe----CCCCCHHHHHHHHHcCCCeE
Confidence 678889999999974 1344445555554 333 676543 34221122344566899999
Q ss_pred eccchHH
Q 012815 308 AYPLSLI 314 (456)
Q Consensus 308 s~p~~ll 314 (456)
..|..+.
T Consensus 361 ~iGs~f~ 367 (496)
T 4fxs_A 361 MVGSMFA 367 (496)
T ss_dssp EESTTTT
T ss_pred EecHHHh
Confidence 8887543
No 232
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.40 E-value=0.32 Score=49.28 Aligned_cols=100 Identities=13% Similarity=0.131 Sum_probs=60.1
Q ss_pred HHHHHHHhC-CCceeecccCChHHHHHHHHhCCcEEEecchHHh-hhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 79 KSLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-AARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 79 ~~Lr~ll~~-~~~lv~pgayDalSArl~e~aGfdAI~vSG~avS-as~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
+.++++.+. +-++++-++.+.-.|+.++++|+|+|.++...-+ .......+.+ .+.-+.+..+..+++.+++|||+|
T Consensus 135 ~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIA~ 213 (361)
T 3khj_A 135 RTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIAD 213 (361)
T ss_dssp HHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBC-CCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCC-CCcHHHHHHHHHHHhhcCCeEEEE
Confidence 344444433 4455556899999999999999999999621101 0000111111 233344555555566678999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
. |-.++.++. ++.++||++|.+=
T Consensus 214 G--GI~~~~di~----kala~GAd~V~vG 236 (361)
T 3khj_A 214 G--GIRYSGDIG----KALAVGASSVMIG 236 (361)
T ss_dssp S--CCCSHHHHH----HHHHHTCSEEEES
T ss_pred C--CCCCHHHHH----HHHHcCCCEEEEC
Confidence 3 333444443 5566899999983
No 233
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=93.39 E-value=3.3 Score=41.50 Aligned_cols=122 Identities=13% Similarity=0.202 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 163 NAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 163 ~~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
+++.+.+.++++.+. |...++|-= |.. +.++-+++|++++++. |+++.+ +.|+......++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kv-------g~~------~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~~~~ 212 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKV-------GHD------DPNIDIARLTAVRERV---DSAVRI--AIDGNGKWDLPT 212 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEEC-------CCS------SHHHHHHHHHHHHHHS---CTTCEE--EEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcC-------CCC------CHHHHHHHHHHHHHHc---CCCCcE--EeeCCCCCCHHH
Confidence 677888888899988 999999932 221 3456688888887764 567766 457777778999
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~ 312 (456)
|++.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++. +.| +..|..-..
T Consensus 213 a~~~~~~l~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~~ 280 (372)
T 3tj4_A 213 CQRFCAAAKDLD--IYWFEEPLWYDDVTSHARLARNTS-IPIALG-----EQ--LYTVDAFRSFIDAGAVAYVQPDVT 280 (372)
T ss_dssp HHHHHHHTTTSC--EEEEESCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHhhcC--CCEEECCCCchhHHHHHHHHhhcC-CCEEeC-----CC--ccCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999998774 6688764 25778889988876 787643 21 23555544 345 666655443
No 234
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=93.37 E-value=0.79 Score=46.09 Aligned_cols=102 Identities=18% Similarity=0.261 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|+.++..+.+.++++.+.|...+||-= |+. +.++-++++++++++.. |+++-+ |.|+......
T Consensus 147 ~~~~~~~~~~~a~~~~~~G~~~~KiKv-------g~~------~~~~di~~v~~vr~a~~--g~~~~l--~vDaN~~~~~ 209 (376)
T 4h2h_A 147 GVMEPDEAARQALEKQREGYSRLQVKL-------GAR------PIEIDIEAIRKVWEAVR--GTGIAL--AADGNRGWTT 209 (376)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEEC-------CSS------CHHHHHHHHHHHHHHHT--TSCCEE--EEECTTCCCH
T ss_pred ccCCHHHHHHHHHHHHhcCceEEEEec-------CCC------CHHHHHHHHHHHHhhcc--CCeeEE--EEeeccCCCH
Confidence 566788888888889999999999932 221 34556788888887753 566554 6788888889
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceee
Q 012815 240 EESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~ 282 (456)
++|++.++++.+.+ +|+|-+ ++.+.++++.+..+ +|+.+
T Consensus 210 ~~A~~~~~~l~~~~---~~iEeP~~~~~~~~~l~~~~~-~pia~ 249 (376)
T 4h2h_A 210 RDALRFSRECPDIP---FVMEQPCNSFEDLEAIRPLCH-HALYM 249 (376)
T ss_dssp HHHHHHHHHCTTSC---EEEESCSSSHHHHHHHGGGCC-SCEEE
T ss_pred HHHHHHHHHHhhcc---ccccCCcchhhhHhhhhhccc-Ccccc
Confidence 99999999998775 488874 56788888888766 67653
No 235
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=93.33 E-value=0.17 Score=49.89 Aligned_cols=193 Identities=15% Similarity=0.135 Sum_probs=105.5
Q ss_pred ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHH
Q 012815 95 ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGY 174 (456)
Q Consensus 95 gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l 174 (456)
+.-|..-.+++.+.|...+++....+. .+++++. ...+.+....+.|+++=+= | .++....+.++.+
T Consensus 14 ~~t~~~~r~~~~~~G~gli~te~~~~~--~~~~~~~---------~~~~~l~~~~~~~~~~QL~-g-~~~~~~~~aa~~a 80 (318)
T 1vhn_A 14 GYTDSAFRTLAFEWGADFAFSEMVSAK--GFLMNSQ---------KTEELLPQPHERNVAVQIF-G-SEPNELSEAARIL 80 (318)
T ss_dssp TTCSHHHHHHHHTTTCCCEECSCEEHH--HHHTTCH---------HHHHHSCCTTCTTEEEEEE-C-SCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHCcCEEEeCCEEEc--ccccCCH---------hHHHhhhCcCCCeEEEEeC-C-CCHHHHHHHHHHH
Confidence 333555556666778866666543332 2455431 1123333344688887663 2 2578888999999
Q ss_pred HHhCccEEEeCCCCC-CCCccCCCCcccc-CHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc
Q 012815 175 IKAGFAGIILEDQVS-PKGCGHTRGRKVV-SREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA 252 (456)
Q Consensus 175 ~~AGaaGI~IEDq~~-pK~CGH~~gk~lv-p~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eA 252 (456)
+++ ++||.|.-... ++++....|-.+. ..+...+-|++++++. ++-|..|.-.- ...++.++-++.+.++
T Consensus 81 ~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-----~~pv~vKir~G--~~~~~~~~~a~~l~~~ 152 (318)
T 1vhn_A 81 SEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-----SGKFSVKTRLG--WEKNEVEEIYRILVEE 152 (318)
T ss_dssp TTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-----SSEEEEEEESC--SSSCCHHHHHHHHHHT
T ss_pred HHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-----CCCEEEEecCC--CChHHHHHHHHHHHHh
Confidence 999 99999975531 1111111122333 4444444455554432 24455554321 1112345778899999
Q ss_pred CCCEEEeccCC---------CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH-HHhcCCCEEeccchHHH
Q 012815 253 GADVLFIDALA---------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE-LEELGFKLVAYPLSLIG 315 (456)
Q Consensus 253 GAD~Ifie~~~---------s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e-L~elGv~~Vs~p~~ll~ 315 (456)
|+|.|.+++.. +.+.++++.+ .+|+++| ||-...-+..+ |++.|+..|.++-.++.
T Consensus 153 G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~----GgI~s~~da~~~l~~~gad~V~iGR~~l~ 218 (318)
T 1vhn_A 153 GVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVS----GDIFTPEDAKRALEESGCDGLLVARGAIG 218 (318)
T ss_dssp TCCEEEEESSCTTTTTSSCCCGGGGGGSCC---SSCEEEE----SSCCSHHHHHHHHHHHCCSEEEESGGGTT
T ss_pred CCCEEEEcCCCccccCCCCcCHHHHHHHHc---CCeEEEE----CCcCCHHHHHHHHHcCCCCEEEECHHHHh
Confidence 99999997532 1222333333 3677665 33211112233 44489999999877543
No 236
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.27 E-value=0.28 Score=49.76 Aligned_cols=89 Identities=17% Similarity=0.113 Sum_probs=58.6
Q ss_pred HHHHHh-CCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEeC
Q 012815 81 LRQILE-LPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDG 157 (456)
Q Consensus 81 Lr~ll~-~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD~ 157 (456)
++.+.+ -+.++++-++.+.-.|+.++++|+++|.+|+.+- . ..|.+..++ +.+ ..|.+++ ++|||+|.
T Consensus 221 i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~gg---r--~~~~g~~~~-~~l---~~v~~~v~~~ipVia~G 291 (368)
T 2nli_A 221 IEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGA---R--QLYEAPGSF-DTL---PAIAERVNKRVPIVFDS 291 (368)
T ss_dssp HHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGG---T--SCSSCCCHH-HHH---HHHHHHHTTSSCEEECS
T ss_pred HHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCc---C--CCCCCCChH-HHH---HHHHHHhCCCCeEEEEC
Confidence 444433 2567888888999999999999999999997541 1 235554444 333 3333334 69999983
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
. .-+...+. ++...||++|.|
T Consensus 292 G--I~~g~D~~----kalalGAd~V~i 312 (368)
T 2nli_A 292 G--VRRGEHVA----KALASGADVVAL 312 (368)
T ss_dssp S--CCSHHHHH----HHHHTTCSEEEE
T ss_pred C--CCCHHHHH----HHHHcCCCEEEE
Confidence 2 33444444 344589999988
No 237
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.27 E-value=0.97 Score=45.26 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=66.5
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012815 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~Rak 247 (456)
.+.++.+.+.|++.|.+--.. |..+.+++++. .++.|..... .. +.++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~--------------~~~~~i~~~~~---------~g~~v~~~v~-----t~----~~a~ 159 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGV--------------PDREVIARLRR---------AGTLTLVTAT-----TP----EEAR 159 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSC--------------CCHHHHHHHHH---------TTCEEEEEES-----SH----HHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCC--------------CcHHHHHHHHH---------CCCeEEEECC-----CH----HHHH
Confidence 445667778899988873221 11345555432 1345555432 22 3466
Q ss_pred HhHhcCCCEEEeccC--------------------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 248 AFADAGADVLFIDAL--------------------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 248 Ay~eAGAD~Ifie~~--------------------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
...++|||.|.+++. ...+.++++.+.+. +|+++. ||-...-...++-++|...|
T Consensus 160 ~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~-iPViaa----GGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 160 AVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVD-IPVVAA----GGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcC-ceEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 778899999998541 11566778877765 676543 34211123456677899999
Q ss_pred eccchHHH
Q 012815 308 AYPLSLIG 315 (456)
Q Consensus 308 s~p~~ll~ 315 (456)
..+..++.
T Consensus 235 ~vGs~~~~ 242 (369)
T 3bw2_A 235 QLGTAFLA 242 (369)
T ss_dssp EESHHHHT
T ss_pred EEChHHhC
Confidence 98876654
No 238
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=93.26 E-value=0.93 Score=45.76 Aligned_cols=126 Identities=16% Similarity=0.201 Sum_probs=86.3
Q ss_pred CCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
|.++++...+.++++.+. |...++|- .|. .+.++-+++|++++++. |+++.|.. |+.....
T Consensus 145 ~~~~~~~~~~~a~~~~~~~G~~~~K~K-------vg~------~~~~~d~~~v~avR~a~---g~~~~l~v--Dan~~~~ 206 (383)
T 3i4k_A 145 GVLPLDVAVAEIEERIEEFGNRSFKLK-------MGA------GDPAEDTRRVAELAREV---GDRVSLRI--DINARWD 206 (383)
T ss_dssp CSCCHHHHHHHHHHHHHHHCCSEEEEE-------CCS------SCHHHHHHHHHHHHHTT---TTTSEEEE--ECTTCSC
T ss_pred eCCCHHHHHHHHHHHHHhcCCcEEEEe-------eCC------CCHHHHHHHHHHHHHHc---CCCCEEEE--ECCCCCC
Confidence 456777888888888776 99999983 222 13566788888887764 45665544 6777778
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+..+ +-+.| +..|..-.
T Consensus 207 ~~~A~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 207 RRTALHYLPILAEAGVE--LFEQPTPADDLETLREITRRTN-VSVMAD-----ES--VWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp HHHHHHHHHHHHHTTCC--EEESCSCTTCHHHHHHHHHHHC-CEEEES-----TT--CSSHHHHHHHHHHTCCSEEEECT
T ss_pred HHHHHHHHHHHHhcCCC--EEECCCChhhHHHHHHHHhhCC-CCEEec-----Cc--cCCHHHHHHHHHcCCCCEEEEcc
Confidence 99999999999999865 66653 24678889988876 777643 21 234444 44445 67776654
Q ss_pred hH
Q 012815 312 SL 313 (456)
Q Consensus 312 ~l 313 (456)
.-
T Consensus 277 ~~ 278 (383)
T 3i4k_A 277 TK 278 (383)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 239
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=93.18 E-value=7.5 Score=38.76 Aligned_cols=212 Identities=15% Similarity=0.163 Sum_probs=132.7
Q ss_pred HHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc-cCCcE
Q 012815 79 KSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPV 153 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra-~~iPV 153 (456)
+-|....+.+--+...|+++.-+++.+ ++.+.+.|.-.|-+.. ...|. +-+...++..++. .++||
T Consensus 7 ~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~g~~-~y~g~--------~~~~~~v~~aa~~~~~VPV 77 (307)
T 3n9r_A 7 EILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAI-KYMGI--------DMAVGMVKIMCERYPHIPV 77 (307)
T ss_dssp HHHHHHHHHTCCEEEEECSSHHHHHHHHHHHHHHTCCEEEEEEHHHH-HHHCH--------HHHHHHHHHHHHHSTTSCE
T ss_pred HHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhhh-hhCCH--------HHHHHHHHHHHHhcCCCcE
Confidence 345555555556888999998888765 5668888876543321 22232 2234445555554 68999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE---Ee
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV---AR 230 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi---AR 230 (456)
..=.|+|. + .+.+++.+++|...|.| |.. | .|.||=+++-+..++-++..| .-|= ++
T Consensus 78 alHLDHg~-~----~e~~~~ai~~GFtSVMi-DgS------~------~p~eeNi~~Tk~vv~~ah~~g--vsVEaELG~ 137 (307)
T 3n9r_A 78 ALHLDHGT-T----FESCEKAVKAGFTSVMI-DAS------H------HAFEENLELTSKVVKMAHNAG--VSVEAELGR 137 (307)
T ss_dssp EEEEEEEC-S----HHHHHHHHHHTCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred EEECCCCC-C----HHHHHHHHHhCCCcEEE-ECC------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEEeee
Confidence 99999984 3 35566777899999999 442 3 377888888888887766433 1111 11
Q ss_pred c----chh-------hcccHHHHHHHHHHhH-hcCCCEEEe-----ccC--------CCHHHHHHHHHhCCCCceeeeee
Q 012815 231 T----DSR-------QALSLEESLRRSRAFA-DAGADVLFI-----DAL--------ASKEEMKAFCEISPLVPKMANML 285 (456)
Q Consensus 231 T----DA~-------~~~~ldeAI~RakAy~-eAGAD~Ifi-----e~~--------~s~eei~~i~~~v~~vP~~~N~~ 285 (456)
+ |.. .-..-+| |+.|. +.|+|++=+ +|. -+.+.++++.+.. .+|+. +
T Consensus 138 igG~Ed~~~~~~~~~~yT~Pee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~-~~PLV---l 209 (307)
T 3n9r_A 138 LMGIEDNISVDEKDAVLVNPKE----AEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT-NIPLV---L 209 (307)
T ss_dssp CCCC----------CCSCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH-CSCEE---E
T ss_pred eccccCCcccccccccCCCHHH----HHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC-CCCeE---E
Confidence 1 000 0023344 44443 589998864 222 1567788885443 36743 4
Q ss_pred ccCCCCC------------------CCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHHH
Q 012815 286 EGGGKTP------------------ILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALTA 327 (456)
Q Consensus 286 ~~~g~tp------------------~lt~~eL~---elGv~~Vs~p~~ll~aa~~A~~~~l~~ 327 (456)
+++...| .++.++++ ++|+.-|=+..-+..+.+.++++.+.+
T Consensus 210 HGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~ 272 (307)
T 3n9r_A 210 HGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANE 272 (307)
T ss_dssp SSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHh
Confidence 5432111 45665555 589999999999999999999888653
No 240
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.17 E-value=0.52 Score=49.33 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=64.0
Q ss_pred HHHHHHHhC--CCceeecccCChHHHHHHHHhCCcEEEecc-hH-HhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEE
Q 012815 79 KSLRQILEL--PGVHQGPACFDALSAKLVEKSGFSFCFTSG-FS-ISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI 154 (456)
Q Consensus 79 ~~Lr~ll~~--~~~lv~pgayDalSArl~e~aGfdAI~vSG-~a-vSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVI 154 (456)
+.++++.+. +-+++..++.+.-.|+.++++|+++|-+|. .+ ... ..-.++.+ .+....+..++.+++.+++|||
T Consensus 285 ~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~-t~~~~~~g-~~~~~~~~~~~~~~~~~~ipVi 362 (514)
T 1jcn_A 285 AMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICI-TQEVMACG-RPQGTAVYKVAEYARRFGVPII 362 (514)
T ss_dssp HHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBT-TBCCCSCC-CCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccc-cccccCCC-ccchhHHHHHHHHHhhCCCCEE
Confidence 334444443 334554579999999999999999998851 12 111 11122222 3344556778888888899999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012815 155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (456)
Q Consensus 155 aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (456)
+|. |..++.++. ++..+||++|.+=-.
T Consensus 363 a~G--GI~~~~di~----kala~GAd~V~iG~~ 389 (514)
T 1jcn_A 363 ADG--GIQTVGHVV----KALALGASTVMMGSL 389 (514)
T ss_dssp EES--CCCSHHHHH----HHHHTTCSEEEESTT
T ss_pred EEC--CCCCHHHHH----HHHHcCCCeeeECHH
Confidence 983 333444444 455589999999443
No 241
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.16 E-value=1.4 Score=40.93 Aligned_cols=169 Identities=15% Similarity=0.111 Sum_probs=90.9
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI 182 (456)
+.++++|.+.+.+-- +.-.-+|.. .+.+ ..++.|.+.++.|+.++.=. + ++ .+.++.+.++|++||
T Consensus 26 ~~~~~~Gad~i~l~i----~Dg~fv~~~-~~~~----~~~~~lr~~~~~~~~v~lmv-~-d~---~~~i~~~~~agad~v 91 (228)
T 1h1y_A 26 DRMVRLGADWLHMDI----MDGHFVPNL-TIGA----PVIQSLRKHTKAYLDCHLMV-T-NP---SDYVEPLAKAGASGF 91 (228)
T ss_dssp HHHHHTTCSEEEEEE----EBSSSSSCB-CBCH----HHHHHHHTTCCSEEEEEEES-S-CG---GGGHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEEEE----ecCCcCcch-hhCH----HHHHHHHhhcCCcEEEEEEe-c-CH---HHHHHHHHHcCCCEE
Confidence 456677998876541 000012321 1122 45556666555565554322 1 33 234677788999999
Q ss_pred EeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc--CCCEEEec
Q 012815 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA--GADVLFID 260 (456)
Q Consensus 183 ~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eA--GAD~Ifie 260 (456)
++=+... -.+..+.++++ +.. | ..+.-.+.... . +++.++|.+. |+|.|++-
T Consensus 92 ~vH~~~~-----------~~~~~~~~~~i---~~~----g--~~igv~~~p~t--~----~e~~~~~~~~~~~~d~vl~~ 145 (228)
T 1h1y_A 92 TFHIEVS-----------RDNWQELIQSI---KAK----G--MRPGVSLRPGT--P----VEEVFPLVEAENPVELVLVM 145 (228)
T ss_dssp EEEGGGC-----------TTTHHHHHHHH---HHT----T--CEEEEEECTTS--C----GGGGHHHHHSSSCCSEEEEE
T ss_pred EECCCCc-----------ccHHHHHHHHH---HHc----C--CCEEEEEeCCC--C----HHHHHHHHhcCCCCCEEEEE
Confidence 5533310 00112233333 221 2 33333331111 1 2556778877 99999874
Q ss_pred cC-----------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 261 AL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 261 ~~-----------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
++ ...+.++++.+..+.+|+.+ .||-++ -+..++.+.|+..++.+..++.+
T Consensus 146 sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v----~GGI~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 146 TVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV----DGGLGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE----ESSCST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred eecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE----ECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 32 12456677766663355432 346555 47889999999999999988764
No 242
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=93.15 E-value=1.6 Score=44.49 Aligned_cols=138 Identities=18% Similarity=0.102 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCC--CCCc----cCC---CCccccC---HHHHHHHHHHHHHHhHhhCCCeEEE
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVS--PKGC----GHT---RGRKVVS---REEAVMRIKAAVDARKESGSDIVIV 228 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~--pK~C----GH~---~gk~lvp---~ee~v~kI~AA~~Ar~~~G~dfvIi 228 (456)
+.+++.+.+.++++.+.|...+||-=..+ +... |.. ....-++ .++.+++|++++++. |+|+.|.
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~av---G~d~~l~ 217 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGA---GPDVEIL 217 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHH---CTTSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHh---CCCCEEE
Confidence 34678888999999999999999831000 0000 110 0000111 345577888877764 6777665
Q ss_pred EecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-C
Q 012815 229 ARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-F 304 (456)
Q Consensus 229 ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v 304 (456)
. |+.....+++|++.++++.++|.+.|=.+ +.+.+.++++.+.++ +|+.+. +. ..+.. ++-+.| +
T Consensus 218 v--DaN~~~~~~~A~~~~~~L~~~~i~~iE~P-~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~ 286 (409)
T 3go2_A 218 L--DLNFNAKPEGYLKILRELADFDLFWVEID-SYSPQGLAYVRNHSP-HPISSC-----ET--LFGIREFKPFFDANAV 286 (409)
T ss_dssp E--ECTTCSCHHHHHHHHHHTTTSCCSEEECC-CSCHHHHHHHHHTCS-SCEEEC-----TT--CCHHHHHHHHHHTTCC
T ss_pred E--ECCCCCCHHHHHHHHHHHhhcCCeEEEeC-cCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCC
Confidence 4 67777789999999999999887654433 357788999998876 787643 21 12444 444556 6
Q ss_pred CEEeccch
Q 012815 305 KLVAYPLS 312 (456)
Q Consensus 305 ~~Vs~p~~ 312 (456)
..|..-..
T Consensus 287 d~v~~k~~ 294 (409)
T 3go2_A 287 DVAIVDTI 294 (409)
T ss_dssp SEEEECHH
T ss_pred CEEEeCCC
Confidence 66655443
No 243
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=93.15 E-value=0.32 Score=49.46 Aligned_cols=82 Identities=20% Similarity=0.074 Sum_probs=55.3
Q ss_pred CCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEeCCCCCCCHH
Q 012815 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAM 165 (456)
Q Consensus 88 ~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD~DtGYG~~~ 165 (456)
+.|+++-++-+.-.|+.++++|+|+|.+|+.+-. ..|.+..++ +++.. |++++ ++|||+|.. .-+..
T Consensus 217 ~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~-----~~d~~~~~~-~~L~~---i~~av~~~ipVia~GG--I~~g~ 285 (352)
T 3sgz_A 217 RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGR-----QLDEVSASI-DALRE---VVAAVKGKIEVYMDGG--VRTGT 285 (352)
T ss_dssp CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGT-----SSCSSCCHH-HHHHH---HHHHHTTSSEEEEESS--CCSHH
T ss_pred CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCC-----ccCCCccHH-HHHHH---HHHHhCCCCeEEEECC--CCCHH
Confidence 5688888888899999999999999999975421 235444333 33333 33334 699999943 33444
Q ss_pred HHHHHHHHHHHhCccEEEe
Q 012815 166 NVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~I 184 (456)
++. ++..+||++|.|
T Consensus 286 Dv~----kaLalGA~aV~i 300 (352)
T 3sgz_A 286 DVL----KALALGARCIFL 300 (352)
T ss_dssp HHH----HHHHTTCSEEEE
T ss_pred HHH----HHHHcCCCEEEE
Confidence 444 334489999998
No 244
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=93.10 E-value=3.4 Score=41.56 Aligned_cols=162 Identities=13% Similarity=0.009 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHH-hccCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCcc-EEEeCCCCCCCCccCCCC-ccc-cCHHHH
Q 012815 133 ISYGEMVDQGQLIT-QAVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFA-GIILEDQVSPKGCGHTRG-RKV-VSREEA 207 (456)
Q Consensus 133 lt~~Eml~~~r~I~-ra~~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaa-GI~IEDq~~pK~CGH~~g-k~l-vp~ee~ 207 (456)
..++.++++.+... +..+.||++-+ +| +++...+.++++.++|++ +|-|.=. |-+..| ..+ .+++..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI---~g~~~~d~~~~a~~l~~~g~~d~ielNis-----CPn~~G~~~l~~~~e~l 181 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSL---VGMSPEETHTILXMVEASKYQGLVELNLS-----CPNVPGXPQIAYDFETT 181 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEE---CCSSHHHHHHHHHHHHHSSCCSEEEEECS-----CCCSTTCCCGGGCHHHH
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEe---cCCCHHHHHHHHHHHhccCCCcEEEEecC-----CCCcCCchhhcCCHHHH
Confidence 45788888877754 45679999876 24 567888889999889988 8877544 333222 334 355555
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEE-------------ecc-------------
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLF-------------IDA------------- 261 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~If-------------ie~------------- 261 (456)
.+-+++++++. +.++.|-=|.|- ..++.. ++..++|||.|- ++.
T Consensus 182 ~~il~av~~~~---~~PV~vKi~p~~----~~~~~a---~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gG 251 (345)
T 3oix_A 182 DQILSEVFTYF---TKPLGIKLPPYF----DIVHFD---QAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGG 251 (345)
T ss_dssp HHHHHHHTTTC---CSCEEEEECCCC----CHHHHH---HHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEE
T ss_pred HHHHHHHHHHh---CCCeEEEECCCC----CHHHHH---HHHHHhCCCceEEEEeecccccceeeccCccccccccccCC
Confidence 55555554443 246666666652 333433 344455555431 221
Q ss_pred ---CC----CHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 262 ---LA----SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 262 ---~~----s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.+ +.+.++++.+.++ .+|+..| +|-...-+..+.-+.|...|-.+..++..
T Consensus 252 lSG~ai~p~a~~~v~~i~~~~~~~ipIIg~----GGI~s~~da~~~l~aGAd~V~igra~~~~ 310 (345)
T 3oix_A 252 IGGDYVKPTALANVHAFYKRLNPSIQIIGT----GGVXTGRDAFEHILCGASMVQIGTALHQE 310 (345)
T ss_dssp EEEGGGHHHHHHHHHHHHTTSCTTSEEEEE----SSCCSHHHHHHHHHHTCSEEEESHHHHHH
T ss_pred cCCccccHHHHHHHHHHHHHcCCCCcEEEE----CCCCChHHHHHHHHhCCCEEEEChHHHhc
Confidence 01 1356778888875 3777654 34221122344556899999988875443
No 245
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.07 E-value=0.31 Score=50.71 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=58.8
Q ss_pred CCceeecccCChHHHHHHHHhCCcEEEecchHHh-hhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHH
Q 012815 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-AARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (456)
Q Consensus 88 ~~~lv~pgayDalSArl~e~aGfdAI~vSG~avS-as~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~n 166 (456)
+-++++.++.+.-.|+.++++|+|+|.+|+.+-+ ....-..+. ..+.-+.+..+...++.+++|||+|. |..++.+
T Consensus 278 ~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~-g~p~~~~l~~v~~~~~~~~ipvia~G--GI~~~~d 354 (494)
T 1vrd_A 278 DLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGV-GVPQLTAVMECSEVARKYDVPIIADG--GIRYSGD 354 (494)
T ss_dssp TSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCC-CCCHHHHHHHHHHHHHTTTCCEEEES--CCCSHHH
T ss_pred CceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCC-CccHHHHHHHHHHHHhhcCCCEEEEC--CcCCHHH
Confidence 4567778899999999999999999999732100 000001111 23444556666666677799999984 4445544
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012815 167 VKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (456)
+. ++..+||++|.+
T Consensus 355 i~----kala~GAd~V~i 368 (494)
T 1vrd_A 355 IV----KALAAGAESVMV 368 (494)
T ss_dssp HH----HHHHTTCSEEEE
T ss_pred HH----HHHHcCCCEEEE
Confidence 44 445689999997
No 246
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=92.94 E-value=3.6 Score=41.71 Aligned_cols=126 Identities=24% Similarity=0.321 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHh---CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 162 GNAMNVKRTVKGYIKA---GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 162 G~~~nv~rtVk~l~~A---GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
++++.+.+.++++.+. |...+||-= |. -+.++-+++|++++++. |+++.|. .|+.....
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKv-------G~------~~~~~d~~~v~avR~a~---G~~~~l~--vDaN~~~~ 231 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRM-------GR------DDPAVDIETAEAVWDAV---GRDTALM--VDFNQGLD 231 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEEC-------CC------SSHHHHHHHHHHHHHHH---CTTSEEE--EECTTCCC
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEec-------CC------CCHHHHHHHHHHHHHHh---CCCCEEE--EECCCCCC
Confidence 4678888889999999 999999932 22 13466688888887764 5676665 47777778
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| +..|..-.
T Consensus 232 ~~~A~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~ik~ 301 (390)
T 3ugv_A 232 MAEAMHRTRQIDDLGLE--WIEEPVVYDNFDGYAQLRHDLK-TPLMIG-----EN--FYGPREMHQALQAGACDLVMPDF 301 (390)
T ss_dssp HHHHHHHHHHHTTSCCS--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHTTCCSEECCBH
T ss_pred HHHHHHHHHHHHhhCCC--EEECCCCcccHHHHHHHHHhcC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999998755 66653 26788899998877 787653 11 234544 44456 66665544
Q ss_pred hHHH
Q 012815 312 SLIG 315 (456)
Q Consensus 312 ~ll~ 315 (456)
.-..
T Consensus 302 ~~~G 305 (390)
T 3ugv_A 302 MRIG 305 (390)
T ss_dssp HHHT
T ss_pred cccC
Confidence 4433
No 247
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.92 E-value=0.49 Score=49.68 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~R 245 (456)
+..+.++.++++|++.|.|. .. |||. ....+.|+.+++.. ++..|++-+- .. .+-
T Consensus 229 ~~~~~a~~l~~aG~d~I~id-~a----~g~~--------~~~~~~v~~i~~~~----p~~~Vi~g~v----~t----~e~ 283 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVD-TA----HGHS--------KGVIERVRWVKQTF----PDVQVIGGNI----AT----AEA 283 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEE-CS----CCSB--------HHHHHHHHHHHHHC----TTSEEEEEEE----CS----HHH
T ss_pred chHHHHHHHhhcccceEEec-cc----CCcc--------hhHHHHHHHHHHHC----CCceEEEeee----Cc----HHH
Confidence 45677889999999999984 32 5553 22334444444332 3555555321 11 244
Q ss_pred HHHhHhcCCCEEEec---------------cCCCHHHHHHHHHhCC--CCceeeeeeccCCCCCCCCHHHHHhcCCCEEe
Q 012815 246 SRAFADAGADVLFID---------------ALASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (456)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i~~~v~--~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs 308 (456)
++++.++|||.|.+- +.++.+.+.++++... .+|+++. +|-...-...++-++|...|.
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~----GGI~~~~di~kal~~GAd~V~ 359 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIAD----GGIRFSGDLAKAMVAGAYCVM 359 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEE----SCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEe----CCCCCHHHHHHHHHcCCCeee
Confidence 788899999999971 1345555666666432 3676543 343211234455678999998
Q ss_pred ccchH
Q 012815 309 YPLSL 313 (456)
Q Consensus 309 ~p~~l 313 (456)
.|..+
T Consensus 360 vGs~~ 364 (490)
T 4avf_A 360 MGSMF 364 (490)
T ss_dssp ECTTT
T ss_pred ecHHH
Confidence 88755
No 248
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.91 E-value=0.28 Score=48.85 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=58.7
Q ss_pred HHHHHHHhC-CCceeecc-cCChHHHHHHHHhCCcEEEecchH---Hh---hhhcccCCCCCCCHHHHHHHHHHHHhccC
Q 012815 79 KSLRQILEL-PGVHQGPA-CFDALSAKLVEKSGFSFCFTSGFS---IS---AARLALPDTGFISYGEMVDQGQLITQAVS 150 (456)
Q Consensus 79 ~~Lr~ll~~-~~~lv~pg-ayDalSArl~e~aGfdAI~vSG~a---vS---as~lG~PD~~~lt~~Eml~~~r~I~ra~~ 150 (456)
+.++++.+. +.++++.| +-+.-.|+.++++|+|+|.+|+.+ .. ....|.|. .+ +..+..++++++
T Consensus 138 ~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g---~~----~~~l~~v~~~~~ 210 (336)
T 1ypf_A 138 NMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGG---WQ----LAALRWCAKAAS 210 (336)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTT---CH----HHHHHHHHHTCS
T ss_pred HHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCch---hH----HHHHHHHHHHcC
Confidence 344444433 23555555 889999999999999999997422 00 01123331 12 345566677779
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
+|||+|..-. +..++. ++..+||++|.|=-
T Consensus 211 ipVIa~GGI~--~g~Dv~----kalalGAdaV~iGr 240 (336)
T 1ypf_A 211 KPIIADGGIR--TNGDVA----KSIRFGATMVMIGS 240 (336)
T ss_dssp SCEEEESCCC--STHHHH----HHHHTTCSEEEESG
T ss_pred CcEEEeCCCC--CHHHHH----HHHHcCCCEEEeCh
Confidence 9999984433 333444 34457999999943
No 249
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.84 E-value=1.2 Score=42.87 Aligned_cols=167 Identities=18% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCh-HHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHH
Q 012815 97 FDA-LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYI 175 (456)
Q Consensus 97 yDa-lSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~ 175 (456)
+|+ --|+..+++|+.+|-+ +-.++.-.=+. ...+.|++.+++||+.- ++.-++.+ +....
T Consensus 65 ~~p~~~A~~~~~~GA~~isv---------lt~~~~f~G~~----~~l~~i~~~v~lPvl~k--dfI~d~~q----i~~a~ 125 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV---------LTEPHRFGGSL----LDLKRVREAVDLPLLRK--DFVVDPFM----LEEAR 125 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE---------ECCCSSSCCCH----HHHHHHHHHCCSCEEEE--SCCCSHHH----HHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEE---------ecchhhhccCH----HHHHHHHHhcCCCEEEC--CcCCCHHH----HHHHH
Confidence 454 4578889999999855 11222111122 24456666889998861 12234444 34567
Q ss_pred HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCC
Q 012815 176 KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (456)
Q Consensus 176 ~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD 255 (456)
++||++|+|--. ..+ + .++......+.+|-+.++-.. +.+| +....++|+|
T Consensus 126 ~~GAD~VlL~~~-------------~l~-~----~l~~l~~~a~~lGl~~lvev~-------~~~E----~~~a~~~gad 176 (254)
T 1vc4_A 126 AFGASAALLIVA-------------LLG-E----LTGAYLEEARRLGLEALVEVH-------TERE----LEIALEAGAE 176 (254)
T ss_dssp HTTCSEEEEEHH-------------HHG-G----GHHHHHHHHHHHTCEEEEEEC-------SHHH----HHHHHHHTCS
T ss_pred HcCCCEEEECcc-------------chH-H----HHHHHHHHHHHCCCeEEEEEC-------CHHH----HHHHHHcCCC
Confidence 799999999322 222 2 223333333345644443222 3334 2345668999
Q ss_pred EEEecc------CCCHHHHHHHHHhCC----CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 256 VLFIDA------LASKEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 256 ~Ifie~------~~s~eei~~i~~~v~----~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.|-+.. .++.+..+++.+.+| .+|+. .++ |-...-+..+|.+ |+.-|+.+.+++++
T Consensus 177 ~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vI---Aeg-GI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 177 VLGINNRDLATLHINLETAPRLGRLARKRGFGGVLV---AES-GYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp EEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEE---EES-CCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred EEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEE---EEc-CCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 987754 234556666766653 23433 233 4221122355667 99999999988865
No 250
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.81 E-value=7.6 Score=37.84 Aligned_cols=177 Identities=17% Similarity=0.172 Sum_probs=103.1
Q ss_pred cccCChHHHHHHHHhCCcEEEecc-hHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC-----CCCCCCH--H
Q 012815 94 PACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG-----DNGYGNA--M 165 (456)
Q Consensus 94 pgayDalSArl~e~aGfdAI~vSG-~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~-----DtGYG~~--~ 165 (456)
.+|.+.-+|..+++.|.+-|=+-+ ++. =|+ .-|+..+ +.+++.+++||.+=+ |+=|.+. .
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~~----GGl----TPS~g~i----~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~ 73 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPKE----GGL----TPSLGVL----KSVRQRVTIPVHPIIRPRGGDFCYSDGEFA 73 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGGG----TCB----CCCHHHH----HHHHHHCCSCEEEBCCSSSSCSCCCHHHHH
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCccc----CCC----CCCHHHH----HHHHHHcCCceEEEECCCCCCCcCCHHHHH
Confidence 378899999999999999886653 221 121 1233332 334556689987743 3447643 3
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec-chhhcccHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLEESLR 244 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART-DA~~~~~ldeAI~ 244 (456)
...+-++.+.++|++||.+== . ...|+ ++.+ .+++ .++++..+ -+..=|- |. ..+..+|++
T Consensus 74 ~M~~Di~~~~~~GadGvV~G~-L--t~dg~------iD~~-~~~~---Li~~a~~~---~vTFHRAfD~--~~d~~~ale 135 (256)
T 1twd_A 74 AILEDVRTVRELGFPGLVTGV-L--DVDGN------VDMP-RMEK---IMAAAGPL---AVTFHRAFDM--CANPLYTLN 135 (256)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-B--CTTSS------BCHH-HHHH---HHHHHTTS---EEEECGGGGG--CSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEee-E--CCCCC------cCHH-HHHH---HHHHhCCC---cEEEECchhc--cCCHHHHHH
Confidence 466788999999999999822 1 11233 3443 3333 33333311 1233331 11 234566766
Q ss_pred HHHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEe
Q 012815 245 RSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVA 308 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs 308 (456)
... +.|.|-|+-.|- ...+.++++.+... -+.++.++|-++ -...+|.+.|++-+=
T Consensus 136 ~L~---~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~----~i~Im~GgGv~~-~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 136 NLA---ELGIARVLTSGQKSDALQGLSKIMELIAHRD----APIIMAGAGVRA-ENLHHFLDAGVLEVH 196 (256)
T ss_dssp HHH---HHTCCEEEECTTSSSTTTTHHHHHHHHTSSS----CCEEEEESSCCT-TTHHHHHHHTCSEEE
T ss_pred HHH---HcCCCEEECCCCCCCHHHHHHHHHHHHHhhC----CcEEEecCCcCH-HHHHHHHHcCCCeEe
Confidence 555 459999997652 34567777776432 245666656443 456777778887554
No 251
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=92.81 E-value=0.83 Score=46.37 Aligned_cols=99 Identities=12% Similarity=0.133 Sum_probs=59.9
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CC--------CccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PK--------GCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~--pK--------~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
+++||++=+--++ +.+++.+.++.++++||+||.+-..+. +. ..|-..|+++.|.. .+.|+.++++.
T Consensus 219 ~~~Pv~vKi~p~~-~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a--~~~v~~i~~~v 295 (367)
T 3zwt_A 219 HRPAVLVKIAPDL-TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLS--TQTIREMYALT 295 (367)
T ss_dssp GCCEEEEEECSCC-CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHH--HHHHHHHHHHT
T ss_pred CCceEEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhH--HHHHHHHHHHc
Confidence 6799999886654 345788888999999999999876541 10 11222344444432 33444444433
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
+.++-|++=-+-.. -+.+..+.++|||+|.+-
T Consensus 296 ---~~~ipvI~~GGI~s-------~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 296 ---QGRVPIIGVGGVSS-------GQDALEKIRAGASLVQLY 327 (367)
T ss_dssp ---TTCSCEEEESSCCS-------HHHHHHHHHHTCSEEEES
T ss_pred ---CCCceEEEECCCCC-------HHHHHHHHHcCCCEEEEC
Confidence 23455555444332 144555667899999974
No 252
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=92.81 E-value=0.55 Score=47.59 Aligned_cols=139 Identities=21% Similarity=0.236 Sum_probs=90.9
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
.+|+-+-. |.++++.+.+.++++.+.|...+||-= |.... -.+.++-+++|++++++. |+++-|.
T Consensus 134 ~v~~y~s~--~~~~~e~~~~~a~~~~~~G~~~~K~Kv-------g~~~~--~~~~~~d~~~v~avR~a~---G~~~~L~- 198 (386)
T 3fv9_G 134 PVPVISSI--GGDTPEAMRAKVARHRAQGFKGHSIKI-------GASEA--EGGPALDAERITACLADR---QPGEWYL- 198 (386)
T ss_dssp CBCEEEEE--CSCCHHHHHHHHHHHHHTTCCEEEEEC-------CCCTT--TTHHHHHHHHHHHHTTTC---CTTCEEE-
T ss_pred ceeeeEec--CCCCHHHHHHHHHHHHHCCCCEEEEec-------cCCCC--CCCHHHHHHHHHHHHHHc---CCCCeEE-
Confidence 36665432 456788888999999999999999832 21111 013456678888776653 5666553
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-C
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-F 304 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v 304 (456)
.|+......++|++-++++. .+.+. |+|-+ ++.+.++++.+..+ +|+..+ .. ..+..+ +-+.| +
T Consensus 199 -vDaN~~~~~~~A~~~~~~l~-~~~~i-~iEeP~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~a~ 267 (386)
T 3fv9_G 199 -ADANNGLTVEHALRMLSLLP-PGLDI-VLEAPCASWAETKSLRARCA-LPLLLD-----EL--IQTETDLIAAIRDDLC 267 (386)
T ss_dssp -EECTTCCCHHHHHHHHHHSC-SSCCC-EEECCCSSHHHHHHHHTTCC-SCEEES-----TT--CCSHHHHHHHHHTTCC
T ss_pred -EECCCCCCHHHHHHHHHHhh-ccCCc-EEecCCCCHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHhCCC
Confidence 47777778999999999883 23455 88874 67888999988876 777643 11 234444 44555 6
Q ss_pred CEEeccchHH
Q 012815 305 KLVAYPLSLI 314 (456)
Q Consensus 305 ~~Vs~p~~ll 314 (456)
..|..-....
T Consensus 268 d~v~~k~~~~ 277 (386)
T 3fv9_G 268 DGVGLKVSKQ 277 (386)
T ss_dssp SEEEEEHHHH
T ss_pred CEEEECcccc
Confidence 6665544433
No 253
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.78 E-value=0.32 Score=49.06 Aligned_cols=100 Identities=11% Similarity=-0.066 Sum_probs=59.8
Q ss_pred HHHHHHHhC--CCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhccc-CCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 79 KSLRQILEL--PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 79 ~~Lr~ll~~--~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~-PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
+.++++.+. +-++++-++-+.-.|+.++++|+|+|.+|..+-+. ..+. -|....+.-+.+..+...++..++|||+
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~-~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa 228 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSV-CTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS 228 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTT-BCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcC-cCccccCCCCccHHHHHHHHHHHHhhcCCcEEE
Confidence 345554443 34566778999999999999999999887211000 0000 0111223333334444445566899999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
| .|..+..++. +...+||++|.+=
T Consensus 229 ~--GGI~~g~di~----kAlalGA~~V~vG 252 (351)
T 2c6q_A 229 D--GGCSCPGDVA----KAFGAGADFVMLG 252 (351)
T ss_dssp E--SCCCSHHHHH----HHHHTTCSEEEES
T ss_pred e--CCCCCHHHHH----HHHHcCCCceecc
Confidence 8 3444554544 5566899999983
No 254
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.71 E-value=3 Score=39.97 Aligned_cols=182 Identities=15% Similarity=0.148 Sum_probs=102.5
Q ss_pred cccCChHHHHHHHHhCCcEEEecc-hHHhhhhcccCCCCCCCHHHHHHHHH-HHHhccCCcEEEeC-----CCCCCCH--
Q 012815 94 PACFDALSAKLVEKSGFSFCFTSG-FSISAARLALPDTGFISYGEMVDQGQ-LITQAVSIPVIGDG-----DNGYGNA-- 164 (456)
Q Consensus 94 pgayDalSArl~e~aGfdAI~vSG-~avSas~lG~PD~~~lt~~Eml~~~r-~I~ra~~iPVIaD~-----DtGYG~~-- 164 (456)
.+|.+.-+|..+++.|.+-|=+-+ ++ .| +..-|+..+ ..++ . ++.+++||.+=+ |+=|.+.
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~-----~G---GlTPS~g~i-~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~ 75 (224)
T 2bdq_A 6 FCAENLTDLTRLDKAIISRVELCDNLA-----VG---GTTPSYGVI-KEANQY-LHEKGISVAVMIRPRGGNFVYNDLEL 75 (224)
T ss_dssp EEEETTTTGGGCCTTTCCEEEEEBCGG-----GT---CBCCCHHHH-HHHHHH-HHHTTCEEEEECCSSSSCSCCCHHHH
T ss_pred EEECCHHHHHHHHHcCCCEEEEcCCcc-----cC---CcCCCHHHH-HHHHHh-hhhcCCceEEEECCCCCCCcCCHHHH
Confidence 367788889999999999776553 32 12 112233333 3332 2 467789987643 3447643
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec-chhhcccHHHHH
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLEESL 243 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART-DA~~~~~ldeAI 243 (456)
....+-++.+.++|++||.+== . ...|+ ++.+ .+++ .++++..+ + +..=|- |.....+..+|+
T Consensus 76 ~~M~~Di~~~~~~GadGvV~G~-L--t~dg~------iD~~-~~~~---Li~~a~~~--~-vTFHRAFD~~~~~d~~~al 139 (224)
T 2bdq_A 76 RIMEEDILRAVELESDALVLGI-L--TSNNH------IDTE-AIEQ---LLPATQGL--P-LVFHMAFDVIPKSDQKKSI 139 (224)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC-B--CTTSS------BCHH-HHHH---HHHHHTTC--C-EEECGGGGGSCTTTHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEee-E--CCCCC------cCHH-HHHH---HHHHhCCC--e-EEEECchhccCCcCHHHHH
Confidence 3466788999999999999821 1 11123 3443 3333 33343322 1 333341 221113456666
Q ss_pred HHHHHhHhcCCCEEEeccC-------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH-hcCCCEEe
Q 012815 244 RRSRAFADAGADVLFIDAL-------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE-ELGFKLVA 308 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~-------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~-elGv~~Vs 308 (456)
+.. .+.|.|-|+-.|- ...+.++++.+...+ -+.++.++|-++ -...+|. +.|++-+=
T Consensus 140 e~L---~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~---ri~Im~GgGV~~-~Ni~~l~~~tGv~e~H 205 (224)
T 2bdq_A 140 DQL---VALGFTRILLHGSSNGEPIIENIKHIKALVEYANN---RIEIMVGGGVTA-ENYQYICQETGVKQAH 205 (224)
T ss_dssp HHH---HHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTT---SSEEEECSSCCT-TTHHHHHHHHTCCEEE
T ss_pred HHH---HHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCC---CeEEEeCCCCCH-HHHHHHHHhhCCCEEc
Confidence 654 4569999997652 224667777765332 134566656443 4566765 68887553
No 255
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.68 E-value=0.22 Score=50.68 Aligned_cols=85 Identities=15% Similarity=0.032 Sum_probs=56.8
Q ss_pred CCceeecccCChHHHHHHHHhCCcEEEecch-HH-hh----hhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCC
Q 012815 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGF-SI-SA----ARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGY 161 (456)
Q Consensus 88 ~~~lv~pgayDalSArl~e~aGfdAI~vSG~-av-Sa----s~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGY 161 (456)
+-+++++++.+.--|+.++++|+|+|.+|+. +. .. ..+|.|+ -+.+..+..+++.+++|||+|. |.
T Consensus 194 ~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~------~~~l~~v~~~~~~~~ipVia~G--GI 265 (404)
T 1eep_A 194 NLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQ------ITAICDVYEACNNTNICIIADG--GI 265 (404)
T ss_dssp TCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCH------HHHHHHHHHHHTTSSCEEEEES--CC
T ss_pred CCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcch------HHHHHHHHHHHhhcCceEEEEC--CC
Confidence 4466668999999999999999999999521 10 00 1123342 3445556666667789999983 33
Q ss_pred CCHHHHHHHHHHHHHhCccEEEe
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~I 184 (456)
.+..++. ++..+||++|.+
T Consensus 266 ~~~~d~~----~ala~GAd~V~i 284 (404)
T 1eep_A 266 RFSGDVV----KAIAAGADSVMI 284 (404)
T ss_dssp CSHHHHH----HHHHHTCSEEEE
T ss_pred CCHHHHH----HHHHcCCCHHhh
Confidence 3454554 445579999999
No 256
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.68 E-value=1.3 Score=42.02 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=56.8
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccc-----------cCHHHHHHHHHHHHHHh
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKV-----------VSREEAVMRIKAAVDAR 218 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~l-----------vp~ee~v~kI~AA~~Ar 218 (456)
+|.+. +|+-+..+..+.++.++++||+.|+|-.-. .| ..+|..+ +..++..+-++++++.
T Consensus 21 ~~~i~---~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp----~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~- 92 (262)
T 1rd5_A 21 IPYIT---AGDPDLATTAEALRLLDGCGADVIELGVPCSDP----YIDGPIIQASVARALASGTTMDAVLEMLREVTPE- 92 (262)
T ss_dssp EEEEE---TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCC----TTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-
T ss_pred EEEee---CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCc----ccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-
Confidence 55554 565566788888999999999999993221 01 1222111 1344444455554433
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA 263 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~ 263 (456)
.+.+++++.+.+.....+++. +.++|||.|.++..+
T Consensus 93 --~~~Pv~~m~~~~~~~~~~~~~-------a~~aGadgv~v~d~~ 128 (262)
T 1rd5_A 93 --LSCPVVLLSYYKPIMFRSLAK-------MKEAGVHGLIVPDLP 128 (262)
T ss_dssp --CSSCEEEECCSHHHHSCCTHH-------HHHTTCCEEECTTCB
T ss_pred --CCCCEEEEecCcHHHHHHHHH-------HHHcCCCEEEEcCCC
Confidence 234677765555433334432 778999998887654
No 257
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=92.64 E-value=1.6 Score=45.20 Aligned_cols=99 Identities=23% Similarity=0.325 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. ++..| +.|+......+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~rv~avRea~----pd~~L--~vDaN~~w~~~ 247 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKG-------GV------FPPEQEAEAIQALRDAF----PGLPL--RLDPNAAWTVE 247 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEEC-------SS------SCHHHHHHHHHHHHHHS----TTCCE--EEECTTCSCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcc-------CC------CCHHHHHHHHHHHHHhC----CCCcE--eccCCCCCCHH
Confidence 357888888888876 5999999942 22 14456688999998876 23333 45888888899
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeee
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N 283 (456)
+|++.++++.+. ..|+|-+ ++.+.++++.+..+ +|+..+
T Consensus 248 ~Ai~~~~~L~~~---l~~iEeP~~~~~~~~~l~~~~~-iPIa~d 287 (441)
T 3vc5_A 248 TSIRVGRALDGV---LEYLEDPTPGIDGMARVAAEVP-MPLATN 287 (441)
T ss_dssp HHHHHHHHTTTT---CSEEECCSSSHHHHHHHHTTSS-SCEEES
T ss_pred HHHHHHHHHHHH---HHHhhccCCCHHHHHHHHhcCC-CCEEeC
Confidence 999999999875 6688764 67889999998877 787655
No 258
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.64 E-value=0.97 Score=46.61 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=75.0
Q ss_pred ecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE-eCCCCCCCHHHHHHHH
Q 012815 93 GPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDNGYGNAMNVKRTV 171 (456)
Q Consensus 93 ~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa-D~DtGYG~~~nv~rtV 171 (456)
+.+..|.-.++.+.++|.+.|.+.+ ..|.| ..+.+.++.+.+..++||++ .. .+ .+.+
T Consensus 140 ~v~~~~~e~~~~lveaGvdvIvldt------a~G~~-------~~~~e~I~~ik~~~~i~Vi~g~V----~t----~e~A 198 (400)
T 3ffs_A 140 AIGVNEIERAKLLVEAGVDVIVLDS------AHGHS-------LNIIRTLKEIKSKMNIDVIVGNV----VT----EEAT 198 (400)
T ss_dssp EECCC-CHHHHHHHHHTCSEEEECC------SCCSB-------HHHHHHHHHHHTTCCCEEEEEEE----CS----HHHH
T ss_pred ecCCCHHHHHHHHHHcCCCEEEEeC------CCCCc-------ccHHHHHHHHHhcCCCeEEEeec----CC----HHHH
Confidence 3455566678888889999997642 13543 34556677787777999997 22 12 4455
Q ss_pred HHHHHhCccEEEeCCCCCC-CCccCCCCc-cccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012815 172 KGYIKAGFAGIILEDQVSP-KGCGHTRGR-KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (456)
Q Consensus 172 k~l~~AGaaGI~IEDq~~p-K~CGH~~gk-~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy 249 (456)
+.++++||++|.+ . ..| ..|+..... .-.|.-+.+..+..+ .+. .+.-|+|=-.-.. -+.+.++
T Consensus 199 ~~a~~aGAD~I~v-G-~g~Gs~~~tr~~~g~g~p~~~al~~v~~~---~~~--~~IPVIA~GGI~~-------~~di~ka 264 (400)
T 3ffs_A 199 KELIENGADGIKV-G-IGPGSICTTRIVAGVGVPQITAIEKCSSV---ASK--FGIPIIADGGIRY-------SGDIGKA 264 (400)
T ss_dssp HHHHHTTCSEEEE-C-C---------CCSCBCCCHHHHHHHHHHH---HTT--TTCCEEEESCCCS-------HHHHHHH
T ss_pred HHHHHcCCCEEEE-e-CCCCcCcccccccccchhHHHHHHHHHHH---HHh--cCCCEEecCCCCC-------HHHHHHH
Confidence 7888999999999 2 211 123211100 114554454444433 222 2455555322211 1335556
Q ss_pred HhcCCCEEEecc
Q 012815 250 ADAGADVLFIDA 261 (456)
Q Consensus 250 ~eAGAD~Ifie~ 261 (456)
.++|||+|.+-.
T Consensus 265 lalGAd~V~vGt 276 (400)
T 3ffs_A 265 LAVGASSVMIGS 276 (400)
T ss_dssp HTTTCSEEEECG
T ss_pred HHcCCCEEEECh
Confidence 678999999854
No 259
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=92.62 E-value=1.4 Score=44.64 Aligned_cols=123 Identities=11% Similarity=-0.003 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcc-cHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-SLEESLR 244 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~-~ldeAI~ 244 (456)
.+.+.++++.+.|...+|| + +.|.. -.+.++-+++|++++++. |+++.|.. |+.... .+++|++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~-~-----k~g~~----~~~~~~d~e~v~avR~a~---G~d~~l~v--DaN~~~~~~~~A~~ 224 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKV-C-----VPIKA----DWSTKEVAYYLRELRGIL---GHDTDMMV--DYLYRFTDWYEVAR 224 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----CCTTC----CCCHHHHHHHHHHHHHHH---CSSSEEEE--ECTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEe-C-----ccCCC----ccCHHHHHHHHHHHHHHh---CCCCeEEE--eCCCCCCCHHHHHH
Confidence 4566788888999999999 2 12311 124567788999888774 67777654 777777 8899999
Q ss_pred HHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccchH
Q 012815 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPLSL 313 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~~l 313 (456)
.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+. .++-+.| +..|..-..-
T Consensus 225 ~~~~L~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~~k~~~ 290 (394)
T 3mkc_A 225 LLNSIEDLELY--FAEATLQHDDLSGHAKLVENTR-SRICGA-----EM--STTRFEAEEWITKGKVHLLQSDYNR 290 (394)
T ss_dssp HHHHTGGGCCS--EEESCSCTTCHHHHHHHHHHCS-SCBEEC-----TT--CCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred HHHHhhhcCCe--EEECCCCchhHHHHHHHHhhCC-CCEEeC-----CC--CCCHHHHHHHHHcCCCCeEecCccc
Confidence 99999999866 55543 36788899998877 787643 21 1233 4445555 6666664443
No 260
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=92.61 E-value=0.94 Score=46.02 Aligned_cols=128 Identities=17% Similarity=0.262 Sum_probs=87.0
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
+|+-+- |. +++.+.+.++++.+.|...++|- .|+ +.++-+++|++++++. |+++.| +
T Consensus 147 v~~y~~---g~-~~e~~~~~a~~~~~~G~~~iKlK-------~g~-------~~~~d~~~v~avR~a~---g~~~~l--~ 203 (392)
T 3ddm_A 147 IGVYAS---GI-NPENPEDVVARKAAEGYRAFKLK-------VGF-------DDARDVRNALHVRELL---GAATPL--M 203 (392)
T ss_dssp EEEEEE---EE-CSSSHHHHHHHHHHHTCCCEEEE-------CSS-------CHHHHHHHHHHHHHHH---CSSSCE--E
T ss_pred eeEEee---cC-CHHHHHHHHHHHHHcCCCEEEEe-------cCC-------CHHHHHHHHHHHHHhc---CCCceE--E
Confidence 666543 21 25567788888889999999992 343 4566788998887774 556555 3
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CC-HHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---cC
Q 012815 231 TDSRQALSLEESLRRSRAFADAGADVLFIDAL---AS-KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG 303 (456)
Q Consensus 231 TDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s-~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---lG 303 (456)
.|+......++|++.++++.+.|.+ |+|-+ .+ .+.++++.+..+ +|+..+ +. ..+..++.+ .|
T Consensus 204 vDaN~~~~~~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~ 273 (392)
T 3ddm_A 204 ADANQGWDLPRARQMAQRLGPAQLD--WLEEPLRADRPAAEWAELAQAAP-MPLAGG-----EN--IAGVAAFETALAAR 273 (392)
T ss_dssp EECTTCCCHHHHHHHHHHHGGGCCS--EEECCSCTTSCHHHHHHHHHHCS-SCEEEC-----TT--CCSHHHHHHHHHHT
T ss_pred EeCCCCCCHHHHHHHHHHHHHhCCC--EEECCCCccchHHHHHHHHHhcC-CCEEeC-----CC--CCCHHHHHHHHHcC
Confidence 4777778899999999999998765 55653 24 778999998877 787653 21 235555444 35
Q ss_pred -CCEEeccc
Q 012815 304 -FKLVAYPL 311 (456)
Q Consensus 304 -v~~Vs~p~ 311 (456)
+..|-.-.
T Consensus 274 a~d~v~~k~ 282 (392)
T 3ddm_A 274 SLRVMQPDL 282 (392)
T ss_dssp CEEEECCCT
T ss_pred CCCEEEeCc
Confidence 55554433
No 261
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=92.60 E-value=0.95 Score=45.43 Aligned_cols=124 Identities=19% Similarity=0.239 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...+||-= |. +.++-+++|++++++. |+++.+. .|+......
T Consensus 137 ~~~~~e~~~~~a~~~~~~G~~~~K~Kv-------G~-------~~~~d~~~v~avR~~~---g~~~~l~--vDaN~~~~~ 197 (368)
T 3q45_A 137 SIDEPHKMAADAVQIKKNGFEIIKVKV-------GG-------SKELDVERIRMIREAA---GDSITLR--IDANQGWSV 197 (368)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEEC-------CS-------CHHHHHHHHHHHHHHH---CSSSEEE--EECTTCBCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEe-------cC-------CHHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCh
Confidence 456788888899999999999999932 22 2466688888887765 5676654 377777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~~ 312 (456)
++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+..+ +-+.| +..|..-..
T Consensus 198 ~~A~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~ 267 (368)
T 3q45_A 198 ETAIETLTLLEPYNIQ--HCEEPVSRNLYTALPKIRQACR-IPIMAD-----ES--CCNSFDAERLIQIQACDSFNLKLS 267 (368)
T ss_dssp HHHHHHHHHHGGGCCS--CEECCBCGGGGGGHHHHHHTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECTT
T ss_pred HHHHHHHHHHhhcCCC--EEECCCChhHHHHHHHHHhhCC-CCEEEc-----CC--cCCHHHHHHHHHcCCCCeEEechh
Confidence 9999999999998755 55653 24567888888776 777643 21 234444 44444 666665444
No 262
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=92.56 E-value=2.2 Score=43.97 Aligned_cols=145 Identities=19% Similarity=0.186 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCC---CCCccCCCC---ccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe---cch
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVS---PKGCGHTRG---RKVVSREEAVMRIKAAVDARKESGSDIVIVAR---TDS 233 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~---pK~CGH~~g---k~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR---TDA 233 (456)
+++.|...=+.|++|||+- |+=-++ +.+..+.+- ..-.-.+-...-++-|++|+++ .+.+|.+- +.+
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdI--I~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~--~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNV--MQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADE--GDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSE--EECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTT--TTCEEEEEECCCHH
T ss_pred CHHHHHHHHHHHHHhCccc--eeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCCccc
Confidence 4666677779999999993 343332 111111110 0000012222233344455542 13344432 222
Q ss_pred h-hcccHHHH----HHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhC--CCCceeeeeec-cCCCCCCCCH----HHHHh
Q 012815 234 R-QALSLEES----LRRSRAFADAGADVLFIDALASKEEMKAFCEIS--PLVPKMANMLE-GGGKTPILNP----LELEE 301 (456)
Q Consensus 234 ~-~~~~ldeA----I~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v--~~vP~~~N~~~-~~g~tp~lt~----~eL~e 301 (456)
. ....++|+ -++++++.++|+|+|++|.+++.+|++.+++.+ .++|+++.+.- ..|+...-++ ..+.+
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~ 207 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVK 207 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHhhc
Confidence 1 11223333 357889999999999999999999998877543 23788888764 2222333444 34566
Q ss_pred cCCCEEeccc
Q 012815 302 LGFKLVAYPL 311 (456)
Q Consensus 302 lGv~~Vs~p~ 311 (456)
+|+.-|-+-.
T Consensus 208 ~~~~avGvNC 217 (406)
T 1lt8_A 208 AGASIIGVNC 217 (406)
T ss_dssp TTCSEEEEES
T ss_pred CCCCEEEecC
Confidence 7776665544
No 263
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=92.55 E-value=6.5 Score=37.21 Aligned_cols=146 Identities=13% Similarity=0.071 Sum_probs=83.5
Q ss_pred HHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 143 r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
+.+.+. +.+++.|.=.+ -.+..+.+.++.+.++||+.|.+--.. | .++ +++++++.++.|
T Consensus 59 ~~lr~~-~~~v~lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~---------g------~~~---l~~~~~~~~~~G 118 (245)
T 1eix_A 59 RELQQR-GFDIFLDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASG---------G------ARM---MTAAREALVPFG 118 (245)
T ss_dssp HHHHHT-TCCEEEEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGG---------C------HHH---HHHHHHTTGGGG
T ss_pred HHHHHC-CCcEEEEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccC---------C------HHH---HHHHHHHHHHcC
Confidence 444443 67899998887 346667788999999999999883321 1 122 334444444333
Q ss_pred C---CeE-EEEecch--hh--c-----ccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCC
Q 012815 223 S---DIV-IVARTDS--RQ--A-----LSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGG 289 (456)
Q Consensus 223 ~---dfv-IiARTDA--~~--~-----~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g 289 (456)
. +.+ |.-.|.. .. . ...|..+..++.-.+.|.+.++.... . ++++.+..+..+ +-+. ||
T Consensus 119 ~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~-e---i~~lr~~~~~~~--i~v~--gG 190 (245)
T 1eix_A 119 KDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQ-E---AVRFKQVFGQEF--KLVT--PG 190 (245)
T ss_dssp GGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGG-G---HHHHHHHHCSSS--EEEE--CC
T ss_pred CCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHH-H---HHHHHHhcCCCC--EEEE--CC
Confidence 2 222 2222332 11 1 12244555556567899999544433 2 444444433222 2222 34
Q ss_pred CCCC----------CCHHHHHhcCCCEEeccchHHHH
Q 012815 290 KTPI----------LNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 290 ~tp~----------lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
-.+. .|++++.+.|...++.|...+.+
T Consensus 191 I~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 227 (245)
T 1eix_A 191 IRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQS 227 (245)
T ss_dssp BCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred cCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCC
Confidence 3332 27899999999999999888764
No 264
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=92.54 E-value=3.5 Score=39.43 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=86.9
Q ss_pred cCCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC--CCe
Q 012815 149 VSIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG--SDI 225 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G--~df 225 (456)
.+.+|++|.=.+ + +..+...++.+.+.|++.+.+--- .| .+-+++++++.+..+ ...
T Consensus 58 ~g~~iflDlK~~--DI~nTv~~~~~~~~~~gad~vTvh~~---------~G---------~~~~~~a~~~~~~~~~~~~~ 117 (239)
T 3tr2_A 58 KGYRIFLDLKFY--DIPQTVAGACRAVAELGVWMMNIHIS---------GG---------RTMMETVVNALQSITLKEKP 117 (239)
T ss_dssp TTCCEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEEGG---------GC---------HHHHHHHHHHHHTCCCSSCC
T ss_pred cCCCEEEEeccc--ccchHHHHHHHHHHhCCCCEEEEecc---------CC---------HHHHHHHHHHHHhcCcCCCc
Confidence 378999998864 5 345677888999999999988332 11 224566666654321 123
Q ss_pred EEEE---ec--chh--h----cccH-HHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-
Q 012815 226 VIVA---RT--DSR--Q----ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP- 292 (456)
Q Consensus 226 vIiA---RT--DA~--~----~~~l-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp- 292 (456)
.++| -| +.. . ...+ +.++++++...++|.|.+++.. .|...+.+..+ |-++-++. |-.|
T Consensus 118 ~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~----~e~~~ir~~~~--~~fl~vtP--GIr~~ 189 (239)
T 3tr2_A 118 LLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSA----QEAALLRKQFD--RNFLLVTP--GIRLE 189 (239)
T ss_dssp EEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCH----HHHHHHHTTCC--TTSEEEEC--CBC--
T ss_pred eEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECc----hhHHHHHHhcC--CCcEEECC--CcCCC
Confidence 3444 22 211 1 1123 5567789989999999998643 46666665544 22222332 2222
Q ss_pred ---------CCCHHHHHhcCCCEEeccchHHHH
Q 012815 293 ---------ILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 293 ---------~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
..|+.+..+.|.+.++.|...+.+
T Consensus 190 g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a 222 (239)
T 3tr2_A 190 TDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQS 222 (239)
T ss_dssp --------CCBCHHHHHHHTCSEEEECHHHHTS
T ss_pred CCCcCcccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 136888899999999999887765
No 265
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.50 E-value=0.57 Score=45.92 Aligned_cols=86 Identities=21% Similarity=0.249 Sum_probs=63.9
Q ss_pred HHHHHHHhCccEEEeCC-CCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 170 TVKGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 170 tVk~l~~AGaaGI~IED-q~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
+.+.+.++|+.+|-+-+ +..- ..|+.+ ...++.+|++..+++++++. +..|++=-|.--..+.+.+.+-++.
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~-~~G~pD-~~~vt~~em~~~~~~I~~~~-----~~pviaD~d~Gyg~~~~~~~~~v~~ 100 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAH-ARGRTD-GQTLTRDEMGREVEAIVRAV-----AIPVNADIEAGYGHAPEDVRRTVEH 100 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHH-HSCCCS-SSSSCHHHHHHHHHHHHHHC-----SSCEEEECTTCSSSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHhhc-----CCCEEeecCCCCCCCHHHHHHHHHH
Confidence 34567789999999984 4421 356655 34789999999999988774 3456765555322357888999999
Q ss_pred hHhcCCCEEEeccC
Q 012815 249 FADAGADVLFIDAL 262 (456)
Q Consensus 249 y~eAGAD~Ifie~~ 262 (456)
|.++||.+|-+|.-
T Consensus 101 l~~aGaagv~iED~ 114 (275)
T 2ze3_A 101 FAALGVAGVNLEDA 114 (275)
T ss_dssp HHHTTCSEEEEECB
T ss_pred HHHcCCcEEEECCC
Confidence 99999999999974
No 266
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=92.49 E-value=0.67 Score=45.79 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=72.0
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh-cccHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSR 247 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~-~~~ldeAI~Rak 247 (456)
-.++.+.++|+..|-.-|...--..||.+. ..++.+||+...++.+++.. ..+|++=+---. ..+.+++++-+.
T Consensus 45 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt-~~vTldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~s~~~a~~na~ 119 (281)
T 1oy0_A 45 STARIFDEAGIPVLLVGDSAANVVYGYDTT-VPISIDELIPLVRGVVRGAP----HALVVADLPFGSYEAGPTAALAAAT 119 (281)
T ss_dssp HHHHHHHTTTCCEEEECTTHHHHTTCCSSS-SSCCGGGTHHHHHHHHHHCT----TSEEEEECCTTSSTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHhcCC----CCeEEEECCCCcccCCHHHHHHHHH
Confidence 345677889999998866653234577653 35788999999988887753 244555444211 125788888766
Q ss_pred HhHh-cCCCEEEeccC-CCHHHHHHHHHhCCCCcee
Q 012815 248 AFAD-AGADVLFIDAL-ASKEEMKAFCEISPLVPKM 281 (456)
Q Consensus 248 Ay~e-AGAD~Ifie~~-~s~eei~~i~~~v~~vP~~ 281 (456)
...+ +||++|-+|+- .-.+.++.++++ ++|++
T Consensus 120 rl~~eaGa~aVklEdg~e~~~~I~al~~a--gIpV~ 153 (281)
T 1oy0_A 120 RFLKDGGAHAVKLEGGERVAEQIACLTAA--GIPVM 153 (281)
T ss_dssp HHHHTTCCSEEEEEBSGGGHHHHHHHHHH--TCCEE
T ss_pred HHHHHhCCeEEEECCcHHHHHHHHHHHHC--CCCEE
Confidence 6665 99999999985 334667777765 36765
No 267
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.39 E-value=0.58 Score=45.69 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=89.5
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
++.+.++|++.|=++++... .-.|=.. ..+++ .+.+.+..++++.+..+ + .+.+++..++|+..
T Consensus 33 ~~~L~~~Gv~~IE~g~~~~~---~~~p~~~--d~~~~---~~~~~~~~~~~~~~l~~----~----~~~i~~a~~ag~~~ 96 (298)
T 2cw6_A 33 IDMLSEAGLSVIETTSFVSP---KWVPQMG--DHTEV---LKGIQKFPGINYPVLTP----N----LKGFEAAVAAGAKE 96 (298)
T ss_dssp HHHHHHTTCSEECCEECCCT---TTCGGGT--THHHH---HHHSCCCTTCBCCEECC----S----HHHHHHHHHTTCSE
T ss_pred HHHHHHcCcCEEEECCCcCc---ccccccC--CHHHH---HHHHhhCCCCEEEEEcC----C----HHhHHHHHHCCCCE
Confidence 45567889999988763311 1122111 22333 34444433555555542 2 34567788899999
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh-----hcccHHHHHHHHHHhHhcCCCE
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR-----QALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~-----~~~~ldeAI~RakAy~eAGAD~ 256 (456)
|+|=+..++. |...+--.+.++..++++.+++..++.|..+.+.-- .+. .....+..++.+++..++|||.
T Consensus 97 v~i~~~~sd~---~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~ 172 (298)
T 2cw6_A 97 VVIFGAASEL---FTKKNINCSIEESFQRFDAILKAAQSANISVRGYVS-CALGCPYEGKISPAKVAEVTKKFYSMGCYE 172 (298)
T ss_dssp EEEEEESCHH---HHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEE-TTTCBTTTBSCCHHHHHHHHHHHHHTTCSE
T ss_pred EEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE-EEeeCCcCCCCCHHHHHHHHHHHHHcCCCE
Confidence 9997765321 211111236788888988888877766543322211 111 1245788999999999999999
Q ss_pred EEec---cCCCHHHHHHHHH
Q 012815 257 LFID---ALASKEEMKAFCE 273 (456)
Q Consensus 257 Ifie---~~~s~eei~~i~~ 273 (456)
|.+. +.-+++++.++.+
T Consensus 173 i~l~DT~G~~~P~~~~~lv~ 192 (298)
T 2cw6_A 173 ISLGDTIGVGTPGIMKDMLS 192 (298)
T ss_dssp EEEEETTSCCCHHHHHHHHH
T ss_pred EEecCCCCCcCHHHHHHHHH
Confidence 9775 3345555555443
No 268
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=92.38 E-value=3.7 Score=38.61 Aligned_cols=146 Identities=16% Similarity=0.196 Sum_probs=84.0
Q ss_pred HHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh-
Q 012815 143 QLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES- 221 (456)
Q Consensus 143 r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~- 221 (456)
+.+.+. +.+++.|.=.+ -.+..+.+.++.+.++||+.|.+--.. | .+++ +++.+..++.
T Consensus 48 ~~l~~~-~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~~---------g------~~~l---~~~~~~~~~~~ 107 (239)
T 1dbt_A 48 KQLKER-NCELFLDLKLH-DIPTTVNKAMKRLASLGVDLVNVHAAG---------G------KKMM---QAALEGLEEGT 107 (239)
T ss_dssp HHHHHT-TCEEEEEEEEC-SCHHHHHHHHHHHHTTTCSEEEEEGGG---------C------HHHH---HHHHHHHHHHS
T ss_pred HHHHHC-CCcEEEEeccc-cchHHHHHHHHHHHhcCCCEEEEeCcC---------C------HHHH---HHHHHHHHhhh
Confidence 344333 67899998887 346677788999999999999873221 1 1222 2222222222
Q ss_pred --CCC----eEEEEecch----h-hc--c--c-HHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeee
Q 012815 222 --GSD----IVIVARTDS----R-QA--L--S-LEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANML 285 (456)
Q Consensus 222 --G~d----fvIiARTDA----~-~~--~--~-ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~ 285 (456)
|.. +.|...|-. . .. . . .|..+..++...+.|.+.++... ++++++.+..+. .++-+.
T Consensus 108 ~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~----~~i~~lr~~~~~--~~i~v~ 181 (239)
T 1dbt_A 108 PAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV----HEAKAIYQAVSP--SFLTVT 181 (239)
T ss_dssp CTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG----GGHHHHTTTSCT--TCEEEE
T ss_pred ccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH----HHHHHHHHhcCC--CcEEEe
Confidence 332 445555432 1 11 1 2 44455555556789999954443 355666555432 222222
Q ss_pred ccCCCCCC----------CCHHHHHhcCCCEEeccchHHHH
Q 012815 286 EGGGKTPI----------LNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 286 ~~~g~tp~----------lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
||-.+. .+++++.+.|...++.|...+.+
T Consensus 182 --gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a 220 (239)
T 1dbt_A 182 --PGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKA 220 (239)
T ss_dssp --CCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred --CCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCC
Confidence 333332 13588999999999999887764
No 269
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=92.38 E-value=1.4 Score=45.53 Aligned_cols=145 Identities=12% Similarity=0.136 Sum_probs=89.8
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC----------CCc-----cC---------CCCccccC---
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP----------KGC-----GH---------TRGRKVVS--- 203 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~p----------K~C-----GH---------~~gk~lvp--- 203 (456)
+|+-+-. +..+++.+.+.++++.+.|..++++-=+..+ +.| |. ..+. ..+
T Consensus 145 v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 221 (440)
T 3t6c_A 145 IALYVHT--DGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGI-YFDPEA 221 (440)
T ss_dssp EEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSE-ECCHHH
T ss_pred eEEEEEC--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccc-cccchh
Confidence 5654422 3346788889999999999999998432211 001 00 0010 111
Q ss_pred -HHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-C--CHHHHHHHHHhCCCCc
Q 012815 204 -REEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-A--SKEEMKAFCEISPLVP 279 (456)
Q Consensus 204 -~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~--s~eei~~i~~~v~~vP 279 (456)
.++-+++|+|++++. |+++.|.. |+......++|++.++++.+.|.+ |+|-+ + +.+.++++.+..+ +|
T Consensus 222 ~~~~d~~~v~avR~a~---G~d~~L~v--DaN~~~~~~~A~~~~~~L~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iP 293 (440)
T 3t6c_A 222 YAKSIPRLFDHLRNKL---GFSVELLH--DAHERITPINAIHMAKALEPYQLF--FLEDPVAPENTEWLKMLRQQSS-TP 293 (440)
T ss_dssp HHHHHHHHHHHHHHHH---CSSSEEEE--ECTTCSCHHHHHHHHHHTGGGCCS--EEECSSCGGGGGGHHHHHHHCC-SC
T ss_pred hHHHHHHHHHHHHHhc---CCCCeEEE--ECCCCCCHHHHHHHHHHhhhcCCC--EEECCCChhhHHHHHHHHhhcC-CC
Confidence 345677888777764 66776654 666677889999999999998755 55653 2 4567888888876 78
Q ss_pred eeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccchH
Q 012815 280 KMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLSL 313 (456)
Q Consensus 280 ~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~~l 313 (456)
+.++ .. ..+..+ +-+.| +..|..-..-
T Consensus 294 Ia~d-----E~--~~~~~~~~~~i~~~a~d~v~~k~~~ 324 (440)
T 3t6c_A 294 IAMG-----EL--FVNVNEWKPLIDNKLIDYIRCHISS 324 (440)
T ss_dssp EEEC-----TT--CCSHHHHHHHHHTTCCSEECCCGGG
T ss_pred EEeC-----cc--cCCHHHHHHHHHcCCccceeechhh
Confidence 7654 11 234444 44455 6666554443
No 270
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=92.37 E-value=0.55 Score=46.88 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=87.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...++|- +|. +.++-++++++++++. |+++.+. .|+......
T Consensus 137 ~~~~~~~~~~~a~~~~~~G~~~~K~K-------~G~-------~~~~d~~~v~avR~~~---g~~~~l~--vDan~~~~~ 197 (356)
T 3ro6_B 137 GIKPVEETLAEAREHLALGFRVLKVK-------LCG-------DEEQDFERLRRLHETL---AGRAVVR--VDPNQSYDR 197 (356)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHHHHH---TTSSEEE--EECTTCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEE-------eCC-------CHHHHHHHHHHHHHHh---CCCCEEE--EeCCCCCCH
Confidence 55678888888999999999999983 232 4567788998888775 5666554 377777789
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC--CCEEeccc
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG--FKLVAYPL 311 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG--v~~Vs~p~ 311 (456)
++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+. .++-+.| +..|..-.
T Consensus 198 ~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~~d~v~~k~ 267 (356)
T 3ro6_B 198 DGLLRLDRLVQELGIE--FIEQPFPAGRTDWLRALPKAIR-RRIAAD-----ES--LLGPADAFALAAPPAACGIFNIKL 267 (356)
T ss_dssp HHHHHHHHHHHHTTCC--CEECCSCTTCHHHHHTSCHHHH-HTEEES-----TT--CCSHHHHHHHHSSSCSCSEEEECH
T ss_pred HHHHHHHHHHHhcCCC--EEECCCCCCcHHHHHHHHhcCC-CCEEeC-----Cc--CCCHHHHHHHHhcCCcCCEEEEcc
Confidence 9999999999998754 55653 25677777777665 676654 21 2344 4455554 77776655
Q ss_pred hHH
Q 012815 312 SLI 314 (456)
Q Consensus 312 ~ll 314 (456)
.-.
T Consensus 268 ~~~ 270 (356)
T 3ro6_B 268 MKC 270 (356)
T ss_dssp HHH
T ss_pred ccc
Confidence 433
No 271
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=92.37 E-value=0.8 Score=45.92 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=87.4
Q ss_pred CCCCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
|+++++.+.+.++++.+. |...+||-= |.. +.++-+++|++++++. |+++.| |.|+.....
T Consensus 136 ~~~~~~~~~~~a~~~~~~~G~~~~K~K~-------g~~------~~~~d~~~v~avR~a~---g~~~~l--~vDan~~~~ 197 (367)
T 3dg3_A 136 GFDDPVKMVAEAERIRETYGINTFKVKV-------GRR------PVQLDTAVVRALRERF---GDAIEL--YVDGNRGWS 197 (367)
T ss_dssp ESSCHHHHHHHHHHHHHHHCCCEEEEEC-------CCS------STHHHHHHHHHHHHHH---GGGSEE--EEECTTCSC
T ss_pred cCCCHHHHHHHHHHHHHhcCccEEEEee-------CCC------hhhhHHHHHHHHHHHh---CCCCEE--EEECCCCCC
Confidence 567888888889999888 999999932 221 1124477888887775 456666 558877788
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ +. ..+..++. +.| +..|..-.
T Consensus 198 ~~~a~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~ 267 (367)
T 3dg3_A 198 AAESLRAMREMADLDLL--FAEELCPADDVLSRRRLVGQLD-MPFIAD-----ES--VPTPADVTREVLGGSATAISIKT 267 (367)
T ss_dssp HHHHHHHHHHTTTSCCS--CEESCSCTTSHHHHHHHHHHCS-SCEEEC-----TT--CSSHHHHHHHHHHTSCSEEEECH
T ss_pred HHHHHHHHHHHHHhCCC--EEECCCCcccHHHHHHHHHhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEEeeh
Confidence 99999999999998755 56653 25678889988876 787643 21 23555443 455 67666644
Q ss_pred hH
Q 012815 312 SL 313 (456)
Q Consensus 312 ~l 313 (456)
.-
T Consensus 268 ~~ 269 (367)
T 3dg3_A 268 AR 269 (367)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 272
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.35 E-value=0.23 Score=48.86 Aligned_cols=149 Identities=9% Similarity=0.120 Sum_probs=83.8
Q ss_pred HHHHHHHhCCcEEEec-chHHhhh-hcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012815 101 SAKLVEKSGFSFCFTS-GFSISAA-RLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (456)
Q Consensus 101 SArl~e~aGfdAI~vS-G~avSas-~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AG 178 (456)
.|+.++++ ||+|=+- |...... .-|+-..-.-..+-+.+.++.|.+.+++||++.+-.|+-....+ +.++.++++|
T Consensus 76 aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~-~~a~~l~~~G 153 (318)
T 1vhn_A 76 AARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE-EIYRILVEEG 153 (318)
T ss_dssp HHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH-HHHHHHHHTT
T ss_pred HHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH-HHHHHHHHhC
Confidence 56677778 9998775 2111111 01221111124455667778888888999999998887543222 7889999999
Q ss_pred ccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHh-cCCCEE
Q 012815 179 FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFAD-AGADVL 257 (456)
Q Consensus 179 aaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~e-AGAD~I 257 (456)
+++|++.+.... .++. +... . +++.+|+. +.+++.++.... . +.+.++.+ .|||.|
T Consensus 154 ~d~i~v~g~~~~--~~~~-~~~~--~-~~i~~i~~--------~ipVi~~GgI~s--~-------~da~~~l~~~gad~V 210 (318)
T 1vhn_A 154 VDEVFIHTRTVV--QSFT-GRAE--W-KALSVLEK--------RIPTFVSGDIFT--P-------EDAKRALEESGCDGL 210 (318)
T ss_dssp CCEEEEESSCTT--TTTS-SCCC--G-GGGGGSCC--------SSCEEEESSCCS--H-------HHHHHHHHHHCCSEE
T ss_pred CCEEEEcCCCcc--ccCC-CCcC--H-HHHHHHHc--------CCeEEEECCcCC--H-------HHHHHHHHcCCCCEE
Confidence 999999765321 1111 1111 1 23333321 234555544221 1 22333333 699999
Q ss_pred Eecc--CCCHHHHHHHHHh
Q 012815 258 FIDA--LASKEEMKAFCEI 274 (456)
Q Consensus 258 fie~--~~s~eei~~i~~~ 274 (456)
++-- +.+++.+.++.+.
T Consensus 211 ~iGR~~l~~P~l~~~~~~~ 229 (318)
T 1vhn_A 211 LVARGAIGRPWIFKQIKDF 229 (318)
T ss_dssp EESGGGTTCTTHHHHHHHH
T ss_pred EECHHHHhCcchHHHHHHH
Confidence 9853 4555566666553
No 273
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.30 E-value=2.1 Score=39.53 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=79.5
Q ss_pred HHHHHHHhc-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 140 DQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 140 ~~~r~I~ra-~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
..++.+.+. .+.|++.|.=.- ..+.. .++.+.++||++|.+-+.. + +++.++ ++++.
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~-d~p~~---~~~~~~~aGad~i~vh~~~--------------~-~~~~~~---~~~~~ 105 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTT-DGGAI---LSRMAFEAGADWITVSAAA--------------H-IATIAA---CKKVA 105 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-SCHHH---HHHHHHHHTCSEEEEETTS--------------C-HHHHHH---HHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeec-ccHHH---HHHHHHhcCCCEEEEecCC--------------C-HHHHHH---HHHHH
Confidence 456777766 468999886433 22322 4588899999999885542 0 233222 22222
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe-ccC--------CCHHHHHHHHHhC-CCCceeeeeeccC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI-DAL--------ASKEEMKAFCEIS-PLVPKMANMLEGG 288 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi-e~~--------~s~eei~~i~~~v-~~vP~~~N~~~~~ 288 (456)
++.|....+ |...... .++++.+.+.|+|.+.+ .+. ...++++++.+.. +.+|+.+ .|
T Consensus 106 ~~~g~~~~~----d~l~~~T----~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v----~G 173 (218)
T 3jr2_A 106 DELNGEIQI----EIYGNWT----MQDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSI----TG 173 (218)
T ss_dssp HHHTCEEEE----ECCSSCC----HHHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEE----ES
T ss_pred HHhCCccce----eeeecCC----HHHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEE----EC
Confidence 222433321 1111111 14566667779997654 321 1345555555532 1244332 23
Q ss_pred CCCCCCCHHHHHhcCCCEEeccchHHHHH
Q 012815 289 GKTPILNPLELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 289 g~tp~lt~~eL~elGv~~Vs~p~~ll~aa 317 (456)
|-+| -+..++.+.|...+..|..++.+.
T Consensus 174 GI~~-~~~~~~~~aGAd~vvvGsaI~~a~ 201 (218)
T 3jr2_A 174 GIVP-EDIYLFEGIKTKTFIAGRALAGAE 201 (218)
T ss_dssp SCCG-GGGGGGTTSCEEEEEESGGGSHHH
T ss_pred CCCH-HHHHHHHHcCCCEEEEchhhcCCC
Confidence 4433 356788999999999998887653
No 274
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.27 E-value=0.69 Score=48.44 Aligned_cols=118 Identities=17% Similarity=0.221 Sum_probs=72.4
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE-ecchhhcccHHHHHHH
Q 012815 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA-RTDSRQALSLEESLRR 245 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA-RTDA~~~~~ldeAI~R 245 (456)
..+.++.+.++|+++|+|--. |||. +...+.|+++++.. +++.|++ .... .+-
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~-----~G~~--------~~~~~~i~~i~~~~----~~~pvi~~~v~t---------~~~ 309 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSS-----QGNS--------VYQIAMVHYIKQKY----PHLQVIGGNVVT---------AAQ 309 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCS-----CCCS--------HHHHHHHHHHHHHC----TTCEEEEEEECS---------HHH
T ss_pred hHHHHHHHHHcCCCEEEeecc-----CCcc--------hhHHHHHHHHHHhC----CCCceEecccch---------HHH
Confidence 566778889999999999332 5553 12234444444432 3556665 2321 244
Q ss_pred HHHhHhcCCCEEEec---------------cCC---CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 246 SRAFADAGADVLFID---------------ALA---SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~---s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
|+.+.++|||.|.+- +.+ ..+++.++++.+. +|+++. ||-...-...++-++|...|
T Consensus 310 a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~-ipVia~----GGI~~~~di~kala~GAd~V 384 (514)
T 1jcn_A 310 AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFG-VPIIAD----GGIQTVGHVVKALALGASTV 384 (514)
T ss_dssp HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGT-CCEEEE----SCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCC-CCEEEE----CCCCCHHHHHHHHHcCCCee
Confidence 788899999999871 111 2356677777665 676543 34322234566777899999
Q ss_pred eccchHHH
Q 012815 308 AYPLSLIG 315 (456)
Q Consensus 308 s~p~~ll~ 315 (456)
..+..++.
T Consensus 385 ~iG~~~l~ 392 (514)
T 1jcn_A 385 MMGSLLAA 392 (514)
T ss_dssp EESTTTTT
T ss_pred eECHHHHc
Confidence 98876543
No 275
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=92.20 E-value=4.4 Score=41.02 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=89.4
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...+||-= |.. +.++-+++|++++++. ++. .=|.|+......
T Consensus 141 ~~~~~e~~~~~a~~~~~~G~~~iKlKv-------g~~------~~~~d~~~v~avR~~~----~~~--~L~vDaN~~w~~ 201 (389)
T 3s5s_A 141 TTGSPERAEEAARRAAAMGFRALKVKV-------GGR------LAASDPARIEAIHAAA----PGA--SLILDGNGGLTA 201 (389)
T ss_dssp CSSCSHHHHHHHHHHHHHTCCEEEEEC-------CGG------GTTTHHHHHHHHHHHC----TTC--EEEEECTTCSCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEe-------cCC------ChHHHHHHHHHHHHhC----CCC--eEEEECCCCCCH
Confidence 445778888888999999999999932 211 1234477888888774 353 446799888899
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHH---hcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELE---ELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~---elG-v~~Vs~p~~ 312 (456)
++|++.++++.+++.+..|+|-+ .+.+.++++.+..+ +|+.+. .. ..+..++. +.| +..+..=..
T Consensus 202 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----Es--~~~~~~~~~~i~~~a~d~v~~k~~ 273 (389)
T 3s5s_A 202 GEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRRAG-VDVAAD-----ES--AASAEDVLRVAAERAATVVNIKLM 273 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CSSHHHHHHHHHTTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhhCC-CCEEEC-----CC--CCCHHHHHHHHHcCCCCEEEecCC
Confidence 99999999997666789999975 26789999999876 777643 11 23555443 455 666655444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
.
T Consensus 274 ~ 274 (389)
T 3s5s_A 274 K 274 (389)
T ss_dssp H
T ss_pred C
Confidence 4
No 276
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=92.15 E-value=1.8 Score=41.90 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=85.5
Q ss_pred CCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC-CCeEE
Q 012815 150 SIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G-~dfvI 227 (456)
+.+|++|.=.+ + +..+...++.+.++|++.+.+--- .| .+-+++++++.++.| ....+
T Consensus 78 g~~VflDlK~~--DIpnTv~~a~~~~~~~gaD~vTVh~~---------~G---------~~~~~~a~~~~~~~g~~~~~l 137 (255)
T 3ldv_A 78 GFSVFLDLKFH--DIPNTCSKAVKAAAELGVWMVNVHAS---------GG---------ERMMAASREILEPYGKERPLL 137 (255)
T ss_dssp TCCEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEEGG---------GC---------HHHHHHHHHHHGGGGGGSCEE
T ss_pred CCCEEEEEecc--cchhHHHHHHHHHHhcCCCEEEEecc---------CC---------HHHHHHHHHHHhhcCCCCceE
Confidence 79999998864 5 345677788889999999988332 11 224556666554322 11222
Q ss_pred EE---ec--chhh------cccH-HHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeecc----CCC-
Q 012815 228 VA---RT--DSRQ------ALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEG----GGK- 290 (456)
Q Consensus 228 iA---RT--DA~~------~~~l-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~----~g~- 290 (456)
++ -| +... ...+ +.++++++...++|.|.+++.. .|++.+.+..+. .++-++.+ ++.
T Consensus 138 i~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa----~e~~~iR~~~g~--~fl~VtPGIr~qg~~~ 211 (255)
T 3ldv_A 138 IGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSA----QEASLLKQHLGR--EFKLVTPGIRPAGSEQ 211 (255)
T ss_dssp EEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCH----HHHHHHHHHHCT--TSEEEEECCCCTTSTT
T ss_pred EEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECH----HHHHHHHHhcCC--CcEEEeCCcccCcCCc
Confidence 22 22 2211 1123 3467788888899999998653 466766665442 12222221 111
Q ss_pred ---CCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 291 ---TPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 291 ---tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.-..|+.+..+.|.+.++.|...+.+
T Consensus 212 ~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 212 GDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp SSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred cceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 01246899999999999999887765
No 277
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.13 E-value=1.5 Score=41.47 Aligned_cols=172 Identities=13% Similarity=0.022 Sum_probs=94.1
Q ss_pred HHHhCCCceeecccCChHH----HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCC
Q 012815 83 QILELPGVHQGPACFDALS----AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGD 158 (456)
Q Consensus 83 ~ll~~~~~lv~pgayDalS----Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~D 158 (456)
+.+...+.+.+.-..|.-. ++.+-+.|++.+-+.- - + ... .+.++.+++... .+++.
T Consensus 12 ~~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~-k---------~---~~~---~~~i~~l~~~~~-~l~vg-- 72 (224)
T 1vhc_A 12 EKLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITF-R---------S---EAA---ADAIRLLRANRP-DFLIA-- 72 (224)
T ss_dssp HHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEET-T---------S---TTH---HHHHHHHHHHCT-TCEEE--
T ss_pred HHHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEec-c---------C---chH---HHHHHHHHHhCc-CcEEe--
Confidence 3344333443333344432 3445556888887761 0 0 011 234455666553 23333
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 159 NGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 159 tGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
+|... +...++..+++||++||.- |. + . + -++++++ .|.++++=..|
T Consensus 73 --aGtvl-~~d~~~~A~~aGAd~v~~p-~~--------d------~-~---v~~~ar~----~g~~~i~Gv~t------- 119 (224)
T 1vhc_A 73 --AGTVL-TAEQVVLAKSSGADFVVTP-GL--------N------P-K---IVKLCQD----LNFPITPGVNN------- 119 (224)
T ss_dssp --EESCC-SHHHHHHHHHHTCSEEECS-SC--------C------H-H---HHHHHHH----TTCCEECEECS-------
T ss_pred --eCcEe-eHHHHHHHHHCCCCEEEEC-CC--------C------H-H---HHHHHHH----hCCCEEeccCC-------
Confidence 33321 2366778889999999763 32 1 1 1 1222322 46666653222
Q ss_pred HHHHHHHHHHhHhcCCCEEEe-ccC-C-CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc-CCCEEeccchHH
Q 012815 239 LEESLRRSRAFADAGADVLFI-DAL-A-SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-GFKLVAYPLSLI 314 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifi-e~~-~-s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el-Gv~~Vs~p~~ll 314 (456)
.+| +....++|||.|-+ ++. . ..+.++++.+.+|.+|++ ..||-++ -+..++.+. |+..|. +..++
T Consensus 120 ~~e----~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~~~~~ipvv----aiGGI~~-~N~~~~l~agga~~v~-gS~i~ 189 (224)
T 1vhc_A 120 PMA----IEIALEMGISAVKFFPAEASGGVKMIKALLGPYAQLQIM----PTGGIGL-HNIRDYLAIPNIVACG-GSWFV 189 (224)
T ss_dssp HHH----HHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTTTTCEEE----EBSSCCT-TTHHHHHTSTTBCCEE-ECGGG
T ss_pred HHH----HHHHHHCCCCEEEEeeCccccCHHHHHHHHhhCCCCeEE----EECCcCH-HHHHHHHhcCCCEEEE-Echhc
Confidence 223 34456899998855 222 2 357788888877656653 3456554 478999998 888887 76665
Q ss_pred HH
Q 012815 315 GV 316 (456)
Q Consensus 315 ~a 316 (456)
.+
T Consensus 190 ~~ 191 (224)
T 1vhc_A 190 EK 191 (224)
T ss_dssp CH
T ss_pred Cc
Confidence 43
No 278
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=92.05 E-value=2.2 Score=44.54 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCcEEEeCCCCCCCH-HHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNGYGNA-MNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~-~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
+.||++|+=.| +. ..+...++.+.+ .|+++|.+--- .| .+-+++++++. +...+|
T Consensus 77 g~~VflDlK~~--DIpnT~~~~a~~~~~~lg~d~vTvh~~---------~G---------~~~l~~~~~~~---~~~v~v 133 (453)
T 3qw4_B 77 GIPVVLDAKRG--DIADTADAYATSAFKHLNAHAITASPY---------MG---------SDSLQPFMRYP---DKAVFV 133 (453)
T ss_dssp TSCBEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECST---------TC---------HHHHHHHHTCT---TSEEEE
T ss_pred CCeEEEEeecC--ChHHHHHHHHHHHHHHcCCCEEEEccc---------CC---------HHHHHHHHHhh---CCcEEE
Confidence 68999998875 63 345566777564 99999998332 12 12455555543 346889
Q ss_pred EEecchhhc----------cc-HHHHHHHHH-HhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCC-CCC
Q 012815 228 VARTDSRQA----------LS-LEESLRRSR-AFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKT-PIL 294 (456)
Q Consensus 228 iARTDA~~~----------~~-ldeAI~Rak-Ay~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~t-p~l 294 (456)
..+|..... .. .+..+++++ .+.++|.|.+++.+. +.+|++.+.+..+..++ ++ ||-. ..-
T Consensus 134 L~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~gat-~~~e~~~ir~~~~~~~~---l~--PGig~qg~ 207 (453)
T 3qw4_B 134 LCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGAT-DPVALARVRARAPTLWF---LV--PGIGAQGG 207 (453)
T ss_dssp EEECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECTT-CHHHHHHHHHHCSSCCE---EE--CCSSTTCC
T ss_pred EEeCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECCC-CHHHHHHHHHhCCCCeE---EE--CCcCCCCC
Confidence 999987531 12 356777788 778899999998653 46789999887764332 23 3322 234
Q ss_pred CHHHHHhcCCCE
Q 012815 295 NPLELEELGFKL 306 (456)
Q Consensus 295 t~~eL~elGv~~ 306 (456)
|+++..+.|+..
T Consensus 208 tp~~a~~~g~d~ 219 (453)
T 3qw4_B 208 SLKASLDAGLRA 219 (453)
T ss_dssp CHHHHHHHHCCT
T ss_pred CHHHHHHhcCCc
Confidence 788888888765
No 279
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.03 E-value=2.9 Score=45.57 Aligned_cols=153 Identities=16% Similarity=0.095 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC-----------CCCCccCCCCccccCH-HHHHHHHHHHHHHhHhhCCCeEEEEecc
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV-----------SPKGCGHTRGRKVVSR-EEAVMRIKAAVDARKESGSDIVIVARTD 232 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~-----------~pK~CGH~~gk~lvp~-ee~v~kI~AA~~Ar~~~G~dfvIiARTD 232 (456)
....+++++..+||++||-|--.- ..||...-+| .+-.. .-..+-|+|++++ .|+||.|..|.-
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGG-s~enR~r~~~eiv~avr~~---vg~~~pv~vrls 224 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGG-SLENRARFWLETLEKVKHA---VGSDCAIATRFG 224 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHH---HTTTSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCC-CHHHHhHHHHHHHHHHHHH---hCCCceEEEEEc
Confidence 355677788889999999986532 1123222223 12111 1122333333333 367888888864
Q ss_pred hh-----hccc-HHHHHHHHHHhHhcCCCEEEeccC----------C--------CHHHHHHHHHhCCCCceeeeeeccC
Q 012815 233 SR-----QALS-LEESLRRSRAFADAGADVLFIDAL----------A--------SKEEMKAFCEISPLVPKMANMLEGG 288 (456)
Q Consensus 233 A~-----~~~~-ldeAI~RakAy~eAGAD~Ifie~~----------~--------s~eei~~i~~~v~~vP~~~N~~~~~ 288 (456)
.. .... .+++++-++++.+ |+|++-+... + ..+.++++.+.+. +|++.| +
T Consensus 225 ~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~----G 298 (729)
T 1o94_A 225 VDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSK-KPVLGV----G 298 (729)
T ss_dssp EECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCS-SCEECC----S
T ss_pred cccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCC-CEEEEe----C
Confidence 32 1122 4678887877776 7998754321 1 2445667777775 787654 2
Q ss_pred CCCCCCCHHHHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCC
Q 012815 289 GKTPILNPLELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGR 332 (456)
Q Consensus 289 g~tp~lt~~eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~ 332 (456)
+-+..-..+++-+-| +..|.++-.++.-- +....+++|.
T Consensus 299 ~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P-----~~~~~~~~g~ 338 (729)
T 1o94_A 299 RYTDPEKMIEIVTKGYADIIGCARPSIADP-----FLPQKVEQGR 338 (729)
T ss_dssp CCCCHHHHHHHHHTTSCSBEEESHHHHHCT-----THHHHHHTTC
T ss_pred CCCCHHHHHHHHHCCCCCEEEeCchhhcCc-----hHHHHHHcCC
Confidence 211111234555555 99999987655322 3445566654
No 280
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=91.99 E-value=0.56 Score=47.91 Aligned_cols=148 Identities=14% Similarity=0.167 Sum_probs=90.4
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC---C-C-C--ccCCCCcc---ccCHHHHHHHHHHHHHHhH
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS---P-K-G--CGHTRGRK---VVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~---p-K-~--CGH~~gk~---lvp~ee~v~kI~AA~~Ar~ 219 (456)
.+|+.+-. +..+++.+.+.++++.+.|...+++.=+.. + + + .....+.. .-..++-+++|++++++.
T Consensus 142 ~v~~y~~~--~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~- 218 (421)
T 4hnl_A 142 AIPAYTHA--VADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY- 218 (421)
T ss_dssp CEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-
T ss_pred ccceeccc--CCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh-
Confidence 36665432 234678889999999999999999853321 0 0 0 00000100 112455677777777664
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH
Q 012815 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (456)
Q Consensus 220 ~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~ 296 (456)
|+++-|. .|+......++|++.++++.+.+ ..|+|-+ .+.+.++++.+.++ +|+...-. .+.....
T Consensus 219 --G~~~~l~--vDan~~~~~~~A~~~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~dE~----~~~~~~~ 287 (421)
T 4hnl_A 219 --GNQFQML--HDVHERLHPNQAIQFAKAAEPYQ--LFFLEDILPPDQSHWLTQLRSQSA-TPIATGEL----FNNPMEW 287 (421)
T ss_dssp --TTSSEEE--EECTTCSCHHHHHHHHHHHGGGC--CSEEECCSCGGGGGGHHHHHTTCC-CCEEECTT----CCSGGGT
T ss_pred --CCCceEe--ccccccCCHHHHHHHHHHhhhhh--hcccccCCcccchHHHHHHHhcCC-CCeecCcc----eehhHHH
Confidence 5666553 47777788999999999999985 5678764 35567888888876 77764311 1111234
Q ss_pred HHHHhcC-CCEEeccc
Q 012815 297 LELEELG-FKLVAYPL 311 (456)
Q Consensus 297 ~eL~elG-v~~Vs~p~ 311 (456)
.++-+.| ++.+..-.
T Consensus 288 ~~~i~~~a~d~v~~d~ 303 (421)
T 4hnl_A 288 QELVKNRQIDFMRAHV 303 (421)
T ss_dssp HHHHHTTCCSEECCCG
T ss_pred HHHHhcCCceEEEeCC
Confidence 5666666 55554433
No 281
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=91.94 E-value=0.11 Score=50.16 Aligned_cols=170 Identities=15% Similarity=0.116 Sum_probs=96.8
Q ss_pred HHHHHHHhCCcEEEe---cchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 101 SAKLVEKSGFSFCFT---SGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 101 SArl~e~aGfdAI~v---SG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
.|+..++.|++.+++ ++ ...+.+++|++.+.+||.++ |+... . .++++. +
T Consensus 43 ~A~~~~~~Ga~~l~vvDL~~-------------------~n~~~i~~i~~~~~~pv~vg-----GGir~-~-~~~~~l-~ 95 (260)
T 2agk_A 43 YAKLYKDRDVQGCHVIKLGP-------------------NNDDAAREALQESPQFLQVG-----GGIND-T-NCLEWL-K 95 (260)
T ss_dssp HHHHHHHTTCTTCEEEEESS-------------------SCHHHHHHHHHHSTTTSEEE-----SSCCT-T-THHHHT-T
T ss_pred HHHHHHHcCCCEEEEEeCCC-------------------CCHHHHHHHHhcCCceEEEe-----CCCCH-H-HHHHHh-c
Confidence 468888889887776 32 23455778888889999984 22212 2 667777 9
Q ss_pred CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec--c-h-h-hcccHH-----HHH-HHH
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART--D-S-R-QALSLE-----ESL-RRS 246 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART--D-A-~-~~~~ld-----eAI-~Ra 246 (456)
||+-|.+ +...-+.+|. ++++ .+.++....-..+ .-.-|=+|+ + . . ...+.. +++ +-+
T Consensus 96 Ga~~Vii-gs~a~~~~g~------~~p~-~~~~~~~~~g~~~---ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a 164 (260)
T 2agk_A 96 WASKVIV-TSWLFTKEGH------FQLK-RLERLTELCGKDR---IVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF 164 (260)
T ss_dssp TCSCEEE-CGGGBCTTCC------BCHH-HHHHHHHHHCGGG---EEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHH
T ss_pred CCCEEEE-CcHHHhhcCC------CCHH-HHHHHHHHhCcCc---EEEEEEeeecCCCceEEEEcCCccccCccHHHHHH
Confidence 9998877 3322222221 2343 3333322221000 001111221 1 0 0 001111 235 678
Q ss_pred HHhHhcCCCEEEeccC--------CCHHHHHHHHHhCC---CCceeeeeeccCCCCCCCCHHHHHhc--CCCEEeccchH
Q 012815 247 RAFADAGADVLFIDAL--------ASKEEMKAFCEISP---LVPKMANMLEGGGKTPILNPLELEEL--GFKLVAYPLSL 313 (456)
Q Consensus 247 kAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~---~vP~~~N~~~~~g~tp~lt~~eL~el--Gv~~Vs~p~~l 313 (456)
+.|.++ |+.+.++++ ++.+.++++.+.+| .+|+.+| ||-...=...++.++ |+.-|+.+..+
T Consensus 165 ~~~~~~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIas----GGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 165 RELRKY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYA----GGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHTTT-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEE----SCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHh-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEe----CCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 888899 999998654 47889999999883 3787665 343222234666777 88888887754
No 282
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=91.93 E-value=3.5 Score=42.19 Aligned_cols=150 Identities=12% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC--CccCC-------------CCcccc----CHHHHHHH
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK--GCGHT-------------RGRKVV----SREEAVMR 210 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK--~CGH~-------------~gk~lv----p~ee~v~k 210 (456)
.+|+-+-. +..+++.+.+.++++.+.|..+++|-=+...+ .+|+. .+..-. ..++.+++
T Consensus 132 ~v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~ 209 (418)
T 3r4e_A 132 GIMVYGHA--NGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKL 209 (418)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHH
T ss_pred eeeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 36664422 22467888999999999999999984321000 01111 000001 13556778
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeecc
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEG 287 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~ 287 (456)
|++++++. |+++.|.. |+.....+++|++-++++.++|.+. +|-+ .+.+.++++.+.++ +|+..+=.
T Consensus 210 v~avR~a~---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~~--iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~-- 279 (418)
T 3r4e_A 210 FEELRKTY---GFDHHLLH--DGHHRYTPQEAANLGKMLEPYQLFW--LEDCTPAENQEAFRLVRQHTV-TPLAVGEI-- 279 (418)
T ss_dssp HHHHHHHH---CSSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCSE--EESCSCCSSGGGGHHHHHHCC-SCEEECTT--
T ss_pred HHHHHHHc---CCCCeEEE--eCCCCCCHHHHHHHHHHHHhhCCCE--EECCCCccCHHHHHHHHhcCC-CCEEEcCC--
Confidence 88877764 67776654 7777778999999999999998664 4543 25678889988877 78765411
Q ss_pred CCCCCCCCHHHHHhcC-CCEEeccchH
Q 012815 288 GGKTPILNPLELEELG-FKLVAYPLSL 313 (456)
Q Consensus 288 ~g~tp~lt~~eL~elG-v~~Vs~p~~l 313 (456)
-...-..+++-+.| +..|..-..-
T Consensus 280 --~~~~~~~~~~l~~~a~d~v~~k~~~ 304 (418)
T 3r4e_A 280 --FNTIWDAKDLIQNQLIDYIRATVVG 304 (418)
T ss_dssp --CCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred --cCCHHHHHHHHHcCCCCeEecCccc
Confidence 11112345666666 6666664443
No 283
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=91.93 E-value=2.8 Score=43.02 Aligned_cols=149 Identities=13% Similarity=0.160 Sum_probs=90.8
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC--CCCcc----CC---------CCccccC----HHHHHHHH
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS--PKGCG----HT---------RGRKVVS----REEAVMRI 211 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~--pK~CG----H~---------~gk~lvp----~ee~v~kI 211 (456)
+|+-+-. +..+++.+.+.++++.+.|..++||-=+.. +..-| .. .+....+ .++-+++|
T Consensus 140 v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v 217 (425)
T 3vcn_A 140 VTVYGHA--NGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF 217 (425)
T ss_dssp EEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH
T ss_pred eeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHH
Confidence 5654321 224678889999999999999999832210 00000 00 0000011 23457788
Q ss_pred HHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccC
Q 012815 212 KAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGG 288 (456)
Q Consensus 212 ~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~ 288 (456)
+|++++. |+++.|.. |+.....+++|++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+.++=.
T Consensus 218 ~avR~a~---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~--- 286 (425)
T 3vcn_A 218 ERAREVL---GWDVHLLH--DVHHRLTPIEAARLGKDLEPYRLF--WLEDSVPAENQAGFRLIRQHTT-TPLAVGEI--- 286 (425)
T ss_dssp HHHHHHH---CSSSEEEE--ECTTCCCHHHHHHHHHHHGGGCCS--EEECCSCCSSTTHHHHHHHHCC-SCEEECTT---
T ss_pred HHHHHHc---CCCCEEEE--ECCCCCCHHHHHHHHHHHHhcCCC--EEECCCChhhHHHHHHHHhcCC-CCEEeCCC---
Confidence 8877664 67777654 777777899999999999999866 45543 25678899998877 78765411
Q ss_pred CCCCCCCHHHHHhcC-CCEEeccchH
Q 012815 289 GKTPILNPLELEELG-FKLVAYPLSL 313 (456)
Q Consensus 289 g~tp~lt~~eL~elG-v~~Vs~p~~l 313 (456)
....-...++-+.| +..|..-..-
T Consensus 287 -~~~~~~~~~~i~~~a~d~v~~k~~~ 311 (425)
T 3vcn_A 287 -FAHVWDAKQLIEEQLIDYLRATVLH 311 (425)
T ss_dssp -CCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred -cCCHHHHHHHHHcCCCCeEecChhh
Confidence 11112345666666 6666654443
No 284
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=91.89 E-value=4.9 Score=41.86 Aligned_cols=198 Identities=14% Similarity=0.087 Sum_probs=108.9
Q ss_pred HHHhCCcEEEecchHHhhhhcccC---------CCC--------CCCHHHHHHHHHHHHhc-------cCCcEEEeCCCC
Q 012815 105 VEKSGFSFCFTSGFSISAARLALP---------DTG--------FISYGEMVDQGQLITQA-------VSIPVIGDGDNG 160 (456)
Q Consensus 105 ~e~aGfdAI~vSG~avSas~lG~P---------D~~--------~lt~~Eml~~~r~I~ra-------~~iPVIaD~DtG 160 (456)
..+.||-.+.+.+...- ...|.| |.+ ...++.+++..+...+. ...||++-+-..
T Consensus 111 l~~~GfG~v~~gtvT~~-pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~ 189 (443)
T 1tv5_A 111 ILKLGFSFIEIGTITPR-GQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKN 189 (443)
T ss_dssp HHTTTCSEEEEEEECSS-CBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCC
T ss_pred HHhcCCCEEEEeeeecC-CCCCCCCccEEeccccceeeeccccCChhHHHHHHHHHHHhhhcccccccCCceEEEEecCc
Confidence 46789988887754431 122322 111 12345566665544322 235676654221
Q ss_pred C--CC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCc-cccCHHHHHHHHHHHHHHhHhh---------------
Q 012815 161 Y--GN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR-KVVSREEAVMRIKAAVDARKES--------------- 221 (456)
Q Consensus 161 Y--G~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk-~lvp~ee~v~kI~AA~~Ar~~~--------------- 221 (456)
. -+ .....+.++++.+ ++++|-|.=. |-++.|. .+...+...+-|++.++++..+
T Consensus 190 ~~~~~~~~dy~~~a~~l~~-~aD~ieiNis-----cPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~ 263 (443)
T 1tv5_A 190 KDTVNIVDDLKYCINKIGR-YADYIAINVS-----SPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNED 263 (443)
T ss_dssp TTCSCHHHHHHHHHHHHGG-GCSEEEEECC-----CTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC--------------
T ss_pred ccchHHHHHHHHHHHHHhc-CCCEEEEecc-----CCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHH
Confidence 1 11 3455566666655 7999888543 5555442 3444454444455554443211
Q ss_pred ------------------------------CCCeE-EEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCC-------
Q 012815 222 ------------------------------GSDIV-IVARTDSRQALSLEESLRRSRAFADAGADVLFIDALA------- 263 (456)
Q Consensus 222 ------------------------------G~dfv-IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~------- 263 (456)
+.++- |..|.-.. ...++..+-|++..++|||.|.+....
T Consensus 264 ~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd--~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~ 341 (443)
T 1tv5_A 264 NKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPD--LNQEQKKEIADVLLETNIDGMIISNTTTQINDIK 341 (443)
T ss_dssp ------------------------CCCCSSSSSCCEEEEEECSC--CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCG
T ss_pred HHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHcCCCEEEEECCCccccccc
Confidence 12332 34443211 234577888999999999999887631
Q ss_pred -----------------CHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 264 -----------------SKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 264 -----------------s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.+.++++.+.++ .+|+..+ +|-...-+..+.-++|...|-.+..++.
T Consensus 342 ~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~----GGI~s~~DA~e~l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 342 SFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS----GGIFSGLDALEKIEAGASVCQLYSCLVF 407 (443)
T ss_dssp GGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE----SSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred ccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE----CCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 1356778888873 3787654 3422222345555689999988877665
No 285
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.81 E-value=2.9 Score=45.03 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCC-C-----------CCCccCCCCccccCHHHH-HHHHHHHHHHhHhhCCCeEEEEec
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQV-S-----------PKGCGHTRGRKVVSREEA-VMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~-~-----------pK~CGH~~gk~lvp~ee~-v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
....+++++..+||++||-|--.- + .||.-.-+| .+.-.-.+ .+-|++++++ .|+||.|..|.
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGG-s~enR~r~~~ei~~avr~~---~g~~~~v~~r~ 231 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGG-SLENRMRLLRELLEDTLDE---CAGRAAVACRI 231 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHH---HTTSSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCC-CHHHHHHHHHHHHHHHHHH---hCCCceEEEEE
Confidence 345677788889999999994431 1 233222222 12111112 2233333333 36789999996
Q ss_pred chh----hcccHHHHHHHHHHhHhcCCCEEEeccCC---------------CHHHHHHHHHhCCCCceeeeeeccCCCCC
Q 012815 232 DSR----QALSLEESLRRSRAFADAGADVLFIDALA---------------SKEEMKAFCEISPLVPKMANMLEGGGKTP 292 (456)
Q Consensus 232 DA~----~~~~ldeAI~RakAy~eAGAD~Ifie~~~---------------s~eei~~i~~~v~~vP~~~N~~~~~g~tp 292 (456)
-.. ....++++++-++++.+ |+|++-+.... ..+.++++.+.++ +|++.| ++-+.
T Consensus 232 s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~----G~i~~ 305 (690)
T 3k30_A 232 TVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTT-KPVVGV----GRFTS 305 (690)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCS-SCEEEC----SCCCC
T ss_pred CccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcC-CeEEEe----CCCCC
Confidence 432 12347889999998888 89999876421 1234455555565 787655 22110
Q ss_pred CCCHHHHHhcC-CCEEeccchHHHHHHHHHHHHHHHHHcCCC
Q 012815 293 ILNPLELEELG-FKLVAYPLSLIGVSVRAMQDALTAIKGGRI 333 (456)
Q Consensus 293 ~lt~~eL~elG-v~~Vs~p~~ll~aa~~A~~~~l~~i~~g~~ 333 (456)
.-..+++-+-| +..|.++-.++.-- +....+++|+.
T Consensus 306 ~~~a~~~l~~g~~d~v~~gR~~~~~P-----~~~~~~~~g~~ 342 (690)
T 3k30_A 306 PDAMVRQIKAGILDLIGAARPSIADP-----FLPNKIRDGRL 342 (690)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHCT-----THHHHHHTTCG
T ss_pred HHHHHHHHHCCCcceEEEcHHhHhCc-----cHHHHHHcCCc
Confidence 01134444445 99999987655432 34555666654
No 286
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=91.77 E-value=0.77 Score=47.01 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=58.2
Q ss_pred HHHHHHh-CCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEe
Q 012815 80 SLRQILE-LPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~-~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD 156 (456)
.++++.+ -+.++++-++.+.-.|+.++++|+|+|.+|+.+- ...|.+..++ +.+. .+.+++ ++|||+|
T Consensus 243 ~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~gg-----r~~~~g~~~~-~~l~---~v~~av~~~ipVia~ 313 (392)
T 2nzl_A 243 DIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGA-----RQLDGVPATI-DVLP---EIVEAVEGKVEVFLD 313 (392)
T ss_dssp HHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGG-----TSSTTCCCHH-HHHH---HHHHHHTTSSEEEEC
T ss_pred HHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCC-----CcCCCCcChH-HHHH---HHHHHcCCCCEEEEE
Confidence 3444443 2457877788899999999999999999986541 1235554444 3333 333334 5999997
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
. |.-+...+. ++..+||++|.|
T Consensus 314 G--GI~~g~Dv~----kalalGAd~V~i 335 (392)
T 2nzl_A 314 G--GVRKGTDVL----KALALGAKAVFV 335 (392)
T ss_dssp S--SCCSHHHHH----HHHHTTCSEEEE
T ss_pred C--CCCCHHHHH----HHHHhCCCeeEE
Confidence 3 333444554 334489999988
No 287
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=91.77 E-value=1.7 Score=43.68 Aligned_cols=159 Identities=11% Similarity=0.064 Sum_probs=89.9
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhcc--CCcEEEeCCCC-C---C
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAV--SIPVIGDGDNG-Y---G 162 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~--~iPVIaD~DtG-Y---G 162 (456)
-.|+.+.++|||+|=+= ||-+.-. ..-..|.---+++. +++.+++|++++ +.||.+-+-.. | |
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 46788889999999876 3333211 11123421124554 355667777777 47888754221 1 2
Q ss_pred --CHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 163 --NAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 163 --~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+.++..+.++.++++|++.|++-... .+.. ....+ +-.. -+++++|+.++ +..++.+++...
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-~~~~~-~~~~-~~~~~~ir~~~------~iPVi~~GgI~s------ 306 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSVGFTIPDT-NIPWG-PAFM-GPIAERVRREA------KLPVTSAWGFGT------ 306 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCC-CCCCC-TTTT-HHHHHHHHHHH------TCCEEECSSTTS------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCcccccc-ccCCC-cchh-HHHHHHHHHHc------CCcEEEeCCCCC------
Confidence 23577888999999999999997642 1110 00001 1111 23445554432 345666665422
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.+..+.+.| ||+|.+-. +.+++..+++.+.+.
T Consensus 307 ---~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 307 ---PQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp ---HHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred ---HHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 24466677788 99998743 345556777776654
No 288
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=91.76 E-value=5.7 Score=41.61 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=85.9
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCC--CCCC-HHH-HHHHHHHHHHh
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN--GYGN-AMN-VKRTVKGYIKA 177 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~Dt--GYG~-~~n-v~rtVk~l~~A 177 (456)
|+.+.++|++.|=+++.+.--+.+.+- .-+-.|.+..++.....+.+.+.+...+ ||.. +.+ +...++...++
T Consensus 36 a~~L~~~Gv~~IE~g~~atF~~~~r~~---~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~ 112 (464)
T 2nx9_A 36 AQQLDQIGYWSLECWGGATFDSCIRFL---GEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKN 112 (464)
T ss_dssp HHHHHTSCCSEEEEEETTHHHHHHHTT---CCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEeCcCccccchhhcc---CCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhC
Confidence 567788999999887522100001111 0123444444443222223334455444 6654 344 56778889999
Q ss_pred CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE-ecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA-RTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA-RTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
|++.|+|=+..+. .+ .++.++++.++.|....... =+|+. ....+..++-+++..++|||.
T Consensus 113 Gvd~i~if~~~sd-------------~~----ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~~~Gad~ 174 (464)
T 2nx9_A 113 GMDVFRVFDAMND-------------VR----NMQQALQAVKKMGAHAQGTLCYTTSP-VHNLQTWVDVAQQLAELGVDS 174 (464)
T ss_dssp TCCEEEECCTTCC-------------TH----HHHHHHHHHHHTTCEEEEEEECCCCT-TCCHHHHHHHHHHHHHTTCSE
T ss_pred CcCEEEEEEecCH-------------HH----HHHHHHHHHHHCCCEEEEEEEeeeCC-CCCHHHHHHHHHHHHHCCCCE
Confidence 9999999886521 12 33444444444443222222 24442 346789999999999999999
Q ss_pred EEec---cCCCHHHHHHHHH
Q 012815 257 LFID---ALASKEEMKAFCE 273 (456)
Q Consensus 257 Ifie---~~~s~eei~~i~~ 273 (456)
|.+. |.-.+.++.++.+
T Consensus 175 I~l~DT~G~~~P~~v~~lv~ 194 (464)
T 2nx9_A 175 IALKDMAGILTPYAAEELVS 194 (464)
T ss_dssp EEEEETTSCCCHHHHHHHHH
T ss_pred EEEcCCCCCcCHHHHHHHHH
Confidence 9884 3445556555543
No 289
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.75 E-value=2 Score=42.59 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=81.1
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
.+++++.|......-...++..++.||+-|-+==.. |.. .| ..+.+.+-|++.+++... +.+.+|-=|
T Consensus 114 tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINi-----g~lk~g----~~~~v~~eI~~V~~a~~~--~~lKVIlEt 182 (288)
T 3oa3_A 114 CVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNY-----PWLSEK----RYTDVFQDIRAVRLAAKD--AILKVILET 182 (288)
T ss_dssp EEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHTTT--SEEEEECCG
T ss_pred EEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeeh-----hhhcCC----cHHHHHHHHHHHHHHhcC--CCceEEEEC
Confidence 357788887666555556788889999988542111 110 01 236677888888887652 235555545
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEEEec-----cCCC---HHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhc
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVLFID-----ALAS---KEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEEL 302 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~Ifie-----~~~s---~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~el 302 (456)
..+ .-+|.+.-++...+||||.|=-- +-.+ .+.|+++++.+. .+|+- . .+|-++. -...++-++
T Consensus 183 ~~L---t~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VK--A-AGGIrt~-edAl~mi~a 255 (288)
T 3oa3_A 183 SQL---TADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVK--A-SGGIRTI-EDCVKMVRA 255 (288)
T ss_dssp GGC---CHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEE--E-ESSCCSH-HHHHHHHHT
T ss_pred CCC---CHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEE--E-eCCCCCH-HHHHHHHHc
Confidence 433 23566666888889999999543 2223 344555554322 23332 1 2322221 234667789
Q ss_pred CCCEEecc
Q 012815 303 GFKLVAYP 310 (456)
Q Consensus 303 Gv~~Vs~p 310 (456)
|..|+-..
T Consensus 256 GA~RiGtS 263 (288)
T 3oa3_A 256 GAERLGAS 263 (288)
T ss_dssp TCSEEEES
T ss_pred CCceeehh
Confidence 99987543
No 290
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=91.74 E-value=2.3 Score=42.99 Aligned_cols=125 Identities=11% Similarity=0.125 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCc--cccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGR--KVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk--~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+...+.++++.++|..+++|- .||..+- ..-+.++.+++|++++++. |+++.|.- |+.....++++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik-------~g~~~~~~~~~~~~~~~~e~v~avR~~~---g~d~~l~v--Dan~~~~~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIK-------VGRGGRHMPLWEGTKRDIAIVRGISEVA---GPAGKIMI--DANNAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-------CCHHHHTSCHHHHHHHHHHHHHHHHHHH---CTTCCEEE--ECTTCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEC-------cCcCcccCCccccHHHHHHHHHHHHHHh---CCCCeEEE--ECCCCCCHHHH
Confidence 677888888999999999982 3431100 0113456678888887764 56665553 77677789999
Q ss_pred HHHHHHhHhcCCCEEEeccC-C-CHHHHHHHHHh-----CCCCceeeeeeccCCCCCCCCHHHHHhcC-CCEEec
Q 012815 243 LRRSRAFADAGADVLFIDAL-A-SKEEMKAFCEI-----SPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-~-s~eei~~i~~~-----v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v~~Vs~ 309 (456)
++-++++.+.| ..|+|-+ + +.+.++++.+. .+ +|+...= .+..-..+++-+.| ++.|..
T Consensus 218 i~~~~~l~~~~--i~~iE~P~~~d~~~~~~l~~~l~~~g~~-iPIa~dE-----~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 218 KEVLAALSDVN--LYWLEEAFHEDEALYEDLKEWLGQRGQN-VLIADGE-----GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHHHHTTTSC--EEEEECSSSCCHHHHHHHHHHHHHHTCC-CEEEECC-----SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHHHHhcC--CCEEecCCcccHHHHHHHHHhhccCCCC-ccEEecC-----CCCHHHHHHHHHcCCCCEEEe
Confidence 99999998875 5577764 3 67788888887 65 7765431 11223567776777 666666
No 291
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=91.71 E-value=1.8 Score=44.90 Aligned_cols=133 Identities=13% Similarity=0.163 Sum_probs=89.7
Q ss_pred CCcEEEeCCCC-CC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNG-YG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtG-YG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
.+|+..= ..| +| +++.+.+.++++.+.|...++|-= |. +.++-+++|++++++. |+++-|
T Consensus 187 ~~p~y~~-~~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKv-------G~-------~~~~d~~~v~avR~a~---G~~~~l 248 (441)
T 4a35_A 187 GYPAYTT-SCAWLGYSDDTLKQLCAQALKDGWTRFKVKV-------GA-------DLQDDMRRCQIIRDMI---GPEKTL 248 (441)
T ss_dssp CEEEEEC-TTCCTTCCHHHHHHHHHHHHHTTCCEEEEEC-------SS-------CHHHHHHHHHHHHHHH---CTTSEE
T ss_pred CcceEEe-ccccCCCCHHHHHHHHHHHHHCCCCEEEEcC-------CC-------CHHHHHHHHHHHHHHh---CCCCeE
Confidence 4676652 223 34 578889999999999999999832 21 4566788998887774 566655
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHh---CCCCceeeeeeccCCCCCCCCHHH---
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEI---SPLVPKMANMLEGGGKTPILNPLE--- 298 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~---v~~vP~~~N~~~~~g~tp~lt~~e--- 298 (456)
+.|+......++|++.++++.+.+ ..|+|-+ .+.+.++++.+. .+ +|+..+ .. ..+..+
T Consensus 249 --~vDaN~~~~~~~A~~~~~~L~~~~--~~~iEeP~~~~d~~~~~~l~~~l~~~~-iPIa~g-----E~--~~~~~~~~~ 316 (441)
T 4a35_A 249 --MMDANQRWDVPEAVEWMSKLAKFK--PLWIEEPTSPDDILGHATISKALVPLG-IGIATG-----EQ--CHNRVIFKQ 316 (441)
T ss_dssp --EEECTTCCCHHHHHHHHHHHGGGC--CSEEECCSCTTCHHHHHHHHHHHGGGT-CEEEEC-----TT--CCSHHHHHH
T ss_pred --EEECCCCCCHHHHHHHHHhhcccC--ccEEeCCCCcccHHHHHHHHHhccCCC-CCEEeC-----Cc--cccHHHHHH
Confidence 458888888999999999999875 5677764 346677888876 44 676543 11 234444
Q ss_pred HHhcC-CCEEeccch
Q 012815 299 LEELG-FKLVAYPLS 312 (456)
Q Consensus 299 L~elG-v~~Vs~p~~ 312 (456)
+-+.| +..+-.-..
T Consensus 317 ~l~~~a~div~~d~~ 331 (441)
T 4a35_A 317 LLQAKALQFLQIDSC 331 (441)
T ss_dssp HHHTTCCSEECCCTT
T ss_pred HHHcCCCCEEEECcc
Confidence 44445 665555333
No 292
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.64 E-value=6.5 Score=38.84 Aligned_cols=145 Identities=17% Similarity=0.194 Sum_probs=86.7
Q ss_pred CCcEEEeCCCC--CC-CH--HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCC
Q 012815 150 SIPVIGDGDNG--YG-NA--MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD 224 (456)
Q Consensus 150 ~iPVIaD~DtG--YG-~~--~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~d 224 (456)
++|+|+=++.+ +. ++ ..+...++..++.||++|.+--.. | . -+..++.+.++++++++++.|-.
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~-----G--s----~~~~~~l~~i~~v~~~a~~~Glp 173 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYI-----G--S----EYEHQSIKNIIQLVDAGMKVGMP 173 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECT-----T--S----TTHHHHHHHHHHHHHHHHTTTCC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEEC-----C--C----CcHHHHHHHHHHHHHHHHHcCCE
Confidence 57777766554 22 22 123346778889999999883322 1 0 12356777788888887765544
Q ss_pred eEEEEecchhh---cccHHHHHH-HHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCC----CH
Q 012815 225 IVIVARTDSRQ---ALSLEESLR-RSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL----NP 296 (456)
Q Consensus 225 fvIiARTDA~~---~~~ldeAI~-RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~l----t~ 296 (456)
+++. + ... ..+ ++.+. -++...++|||.|-..-. .+.++++++..+ +|++ ..++.+.+.- ..
T Consensus 174 vIie--~-~~G~~~~~d-~e~i~~aariA~elGAD~VKt~~t--~e~~~~vv~~~~-vPVv---~~GG~~~~~~~~l~~v 243 (295)
T 3glc_A 174 TMAV--T-GVGKDMVRD-QRYFSLATRIAAEMGAQIIKTYYV--EKGFERIVAGCP-VPIV---IAGGKKLPEREALEMC 243 (295)
T ss_dssp EEEE--E-CC----CCS-HHHHHHHHHHHHHTTCSEEEEECC--TTTHHHHHHTCS-SCEE---EECCSCCCHHHHHHHH
T ss_pred EEEE--C-CCCCccCCC-HHHHHHHHHHHHHhCCCEEEeCCC--HHHHHHHHHhCC-CcEE---EEECCCCCHHHHHHHH
Confidence 4443 2 221 012 24444 567778999999988743 256788887765 6654 2342222200 13
Q ss_pred HHHHhcCCCEEeccchHHH
Q 012815 297 LELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 297 ~eL~elGv~~Vs~p~~ll~ 315 (456)
.+.-+.|..-++++-..+.
T Consensus 244 ~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 244 WQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp HHHHHTTCSEEEESHHHHT
T ss_pred HHHHHhCCeEEEeHHHHhc
Confidence 4555789999999988773
No 293
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=91.63 E-value=0.82 Score=47.53 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+.....++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----~d~~L--~vDaN~~w~~~ 252 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKG-------GV------FAPEEEMAAVEALRAAF----PDHPL--RLDPNAAWTPQ 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSCE--EEECTTCSCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECC-------CC------CCHHHHHHHHHHHHHhC----CCCcE--EEECCCCCCHH
Confidence 357888888888876 4999999942 22 13456688999988876 23333 45888888899
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC-CCEEec
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v~~Vs~ 309 (456)
+|++-++++.+. ..|+|-+ ++.+.++++.+..+ +|+..+-.. +......++-+.| +..+..
T Consensus 253 ~Ai~~~~~L~~~---l~~iEeP~~~~~~~~~l~~~~~-iPIa~dE~~----~~~~~~~~~l~~~a~div~~ 315 (445)
T 3vdg_A 253 TSVKVAAGLEGV---LEYLEDPTPGLDGMAEVAAQAP-MPLATNMCV----VAFDQLPAAVAKNSVQVVLS 315 (445)
T ss_dssp HHHHHHHHTTTT---CSEEECCSSSHHHHHHHHHHCS-SCEEESSSC----CSGGGHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHHhhH---HHeeeCCCCCHHHHHHHHhcCC-CCEEcCCcC----CCHHHHHHHHHcCCCCEEee
Confidence 999999999875 6678764 67889999999887 787654211 1112344555556 555444
No 294
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=91.62 E-value=6.2 Score=40.42 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=92.4
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCC--CCCCcc-------CC------CCccccC----HHHHHHH
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQV--SPKGCG-------HT------RGRKVVS----REEAVMR 210 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~--~pK~CG-------H~------~gk~lvp----~ee~v~k 210 (456)
.+|+-+-. +..+++.+.+.++++.+.|..++||-=+. .+...| +. .+....+ .++-+++
T Consensus 138 ~v~~y~~~--~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 138 RILSYTHA--NGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 36664421 22367888899999999999999984221 000000 00 0000011 4566788
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeecc
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEG 287 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~ 287 (456)
|+|++++. |+++.|.. |+.....+++|++.++++.++|.+ |+|-+ .+.+.++++.+.++ +|+..+-.
T Consensus 216 v~avR~av---G~d~~l~v--DaN~~~~~~~A~~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~dE~-- 285 (424)
T 3v3w_A 216 FAAVRKEF---GPDIHLLH--DVHHRLTPIEAARLGKALEPYHLF--WMEDAVPAENQESFKLIRQHTT-TPLAVGEV-- 285 (424)
T ss_dssp HHHHHHHH---CSSSEEEE--ECTTCCCHHHHHHHHHHHGGGCCS--EEECCSCCSSTTHHHHHHHHCC-SCEEECTT--
T ss_pred HHHHHHHc---CCCCcEEE--eCCCCCCHHHHHHHHHHHHhcCCC--EEECCCChHhHHHHHHHHhhCC-CCEEEccC--
Confidence 88887764 67776654 677777899999999999999865 45543 25678899998877 78765411
Q ss_pred CCCCCCCCHHHHHhcC-CCEEeccchH
Q 012815 288 GGKTPILNPLELEELG-FKLVAYPLSL 313 (456)
Q Consensus 288 ~g~tp~lt~~eL~elG-v~~Vs~p~~l 313 (456)
-...-..+++-+.| +..|..-..-
T Consensus 286 --~~~~~~~~~~i~~ga~d~v~~k~~~ 310 (424)
T 3v3w_A 286 --FNSIHDCRELIQNQWIDYIRTTIVH 310 (424)
T ss_dssp --CCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred --cCCHHHHHHHHHcCCCCeEeecchh
Confidence 11112345666666 6666654443
No 295
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=91.58 E-value=12 Score=37.50 Aligned_cols=212 Identities=12% Similarity=0.125 Sum_probs=135.4
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc-cCCc
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIP 152 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra-~~iP 152 (456)
.+-|....+.+--+.+.|+++.-+++.+ ++.+.+.|.-.|-+.. ...| .+.+...++..++. .++|
T Consensus 7 ~~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~-~y~g--------~~~~~~~v~~aa~~~~~VP 77 (323)
T 2isw_A 7 RQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGAL-KYSD--------MIYLKKLCEAALEKHPDIP 77 (323)
T ss_dssp HHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHH-HHTT--------THHHHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHH-HhCC--------HHHHHHHHHHHHHhcCCCc
Confidence 3456666666667889999999887765 5568888876654422 2233 23334445555555 7899
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE-----
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI----- 227 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI----- 227 (456)
|..=.|+|. + .+.+++.+++|...|.|... | .|.||=++.-+..++-++..| ..|
T Consensus 78 ValHlDHg~-~----~e~i~~ai~~GFtSVMiDgS-------~------~p~eENi~~Tk~vv~~ah~~g--vsVEaELG 137 (323)
T 2isw_A 78 ICIHLDHGD-T----LESVKMAIDLGFSSVMIDAS-------H------HPFDENVRITKEVVAYAHARS--VSVEAELG 137 (323)
T ss_dssp EEEEEEEEC-S----HHHHHHHHHTTCSEEEECCT-------T------SCHHHHHHHHHHHHHHHHTTT--CEEEEEES
T ss_pred EEEECCCCC-C----HHHHHHHHHcCCCeEEecCC-------C------CCHHHHHHHHHHHHHHHHHcC--CeEEEEeC
Confidence 999999983 3 34567888999999999443 3 377888888888887765432 111
Q ss_pred -EEecc----hh-hcccHHHHHHHHHHhH-hcCCCEEEe-----ccC------C----CHHHHHHHHHhCCCCceeeeee
Q 012815 228 -VARTD----SR-QALSLEESLRRSRAFA-DAGADVLFI-----DAL------A----SKEEMKAFCEISPLVPKMANML 285 (456)
Q Consensus 228 -iARTD----A~-~~~~ldeAI~RakAy~-eAGAD~Ifi-----e~~------~----s~eei~~i~~~v~~vP~~~N~~ 285 (456)
++-.+ .. .-..-+| |+.|. +.|+|++=+ +|. + +.+.++++.+.++ +|+. +
T Consensus 138 ~vgg~Ed~v~~~~~yTdPee----a~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~-vpLV---l 209 (323)
T 2isw_A 138 TLGGIEEDVQNTVQLTEPQD----AKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG-IPLV---M 209 (323)
T ss_dssp CC----------CCCCCHHH----HHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC-SCEE---E
T ss_pred CccCCccCcccccccCCHHH----HHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC-CCeE---E
Confidence 11111 00 0123333 44444 689998864 232 1 1357888888775 6753 4
Q ss_pred ccCCCCC------------------CCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHH
Q 012815 286 EGGGKTP------------------ILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALT 326 (456)
Q Consensus 286 ~~~g~tp------------------~lt~~eL~---elGv~~Vs~p~~ll~aa~~A~~~~l~ 326 (456)
+++...| .++.++++ ++|+.-|=+..-+..+.+.++++.+.
T Consensus 210 HGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~ 271 (323)
T 2isw_A 210 HGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFV 271 (323)
T ss_dssp CSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 5422111 46666666 69999999999999999999988864
No 296
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=91.58 E-value=2.6 Score=42.52 Aligned_cols=151 Identities=19% Similarity=0.119 Sum_probs=96.3
Q ss_pred cccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHH---HhccCCcEEEeC---CCCC---CC-
Q 012815 94 PACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLI---TQAVSIPVIGDG---DNGY---GN- 163 (456)
Q Consensus 94 pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I---~ra~~iPVIaD~---DtGY---G~- 163 (456)
|.....+|+.-+.++|.|+|-+-- .+| ||...-.-.+++..+++| |+..++|+++-+ +.+- .+
T Consensus 108 p~~l~~~sve~a~~~GADAVk~lv------~~g-~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~ 180 (332)
T 3iv3_A 108 PDCLVDWSIKRLKEAGADAVKFLL------YYD-VDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSV 180 (332)
T ss_dssp CCBCTTCCHHHHHHTTCSEEEEEE------EEC-TTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSH
T ss_pred CccccccCHHHHHHcCCCEEEEEE------EcC-CCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcch
Confidence 444566778888888888886542 122 343321223455555555 556689988732 2221 12
Q ss_pred ------HHHHHHHHHHH--HHhCccEEEeCCCCCCC-CccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh
Q 012815 164 ------AMNVKRTVKGY--IKAGFAGIILEDQVSPK-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234 (456)
Q Consensus 164 ------~~nv~rtVk~l--~~AGaaGI~IEDq~~pK-~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~ 234 (456)
+..|.+.+|.+ .+.|++=+++|=-..++ .=|+..+..+++.+|.++..+..+++.. .++++.+.--.
T Consensus 181 ~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~---~P~v~lsgG~~- 256 (332)
T 3iv3_A 181 EFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTD---LPYIYLSAGVS- 256 (332)
T ss_dssp HHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCS---SCEEEECTTCC-
T ss_pred hhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCC---CCEEEECCCCC-
Confidence 34589999999 78899999999543322 1144456789999999888888877753 57777765421
Q ss_pred hcccHHHHHHHHHHhHhcCC--CEEEe
Q 012815 235 QALSLEESLRRSRAFADAGA--DVLFI 259 (456)
Q Consensus 235 ~~~~ldeAI~RakAy~eAGA--D~Ifi 259 (456)
-++.++-.+-..+||| -.|.+
T Consensus 257 ----~~~fl~~v~~A~~aGa~f~Gv~~ 279 (332)
T 3iv3_A 257 ----AELFQETLVFAHKAGAKFNGVLC 279 (332)
T ss_dssp ----HHHHHHHHHHHHHHTCCCCEEEE
T ss_pred ----HHHHHHHHHHHHHcCCCcceEEe
Confidence 2344555566778999 77765
No 297
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=91.55 E-value=3.8 Score=41.13 Aligned_cols=166 Identities=22% Similarity=0.263 Sum_probs=100.8
Q ss_pred eecccC----ChHHH--HHHHHhCCcEEEecchHHhhhhcccCC-CCCCCHH---HHHHHHHHHHhcc-CCcEEEeC---
Q 012815 92 QGPACF----DALSA--KLVEKSGFSFCFTSGFSISAARLALPD-TGFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (456)
Q Consensus 92 v~pgay----DalSA--rl~e~aGfdAI~vSG~avSas~lG~PD-~~~lt~~---Eml~~~r~I~ra~-~iPVIaD~--- 157 (456)
.|||+| |-+-. +-+.++|.++|.+=|.. . . -| .+.-.++ =+...++.|.+.. ++-|+.|.
T Consensus 48 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp-~---~--Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc 121 (323)
T 1l6s_A 48 AMPGVMRIPEKHLAREIERIANAGIRSVMTFGIS-H---H--TDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFC 121 (323)
T ss_dssp TSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEEC-S---S--CBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECST
T ss_pred CCCCceeeCHHHHHHHHHHHHHCCCCEEEEeCCC-C---C--CCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeecc
Confidence 466665 33322 22345699998875431 0 0 11 1111111 2455677777766 47788884
Q ss_pred ---CCCC------C---CHHHHHHH---HHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 158 ---DNGY------G---NAMNVKRT---VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 158 ---DtGY------G---~~~nv~rt---Vk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
++|+ | |.+.+... +-.+.+|||+-|-=-|- ++| ||.|++++-++.|
T Consensus 122 ~YT~HGHcGil~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdM--------MDG-----------rV~aIR~aLd~~G 182 (323)
T 1l6s_A 122 EYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAA--------MDG-----------QVQAIRQALDAAG 182 (323)
T ss_dssp TTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHHTT
T ss_pred ccCCCCceEeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHhCC
Confidence 2232 2 23334444 44556899998876663 444 5555555555444
Q ss_pred -CCeEEEEecc------------hhhc-------------ccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHHHHhC
Q 012815 223 -SDIVIVARTD------------SRQA-------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEIS 275 (456)
Q Consensus 223 -~dfvIiARTD------------A~~~-------------~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~v 275 (456)
.+.-|.+-+- +... ..-+||++.+..=.+-|||+|+| |+++-.+-++++.+.+
T Consensus 183 ~~~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~ 262 (323)
T 1l6s_A 183 FKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERT 262 (323)
T ss_dssp CTTCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTCHHHHHHHHTTC
T ss_pred CCCceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcchhHHHHHHHHhc
Confidence 3566665542 2111 13689999999999999999999 8899999999999988
Q ss_pred CCCceeee
Q 012815 276 PLVPKMAN 283 (456)
Q Consensus 276 ~~vP~~~N 283 (456)
. +|+.+=
T Consensus 263 ~-~P~aaY 269 (323)
T 1l6s_A 263 E-LPIGAY 269 (323)
T ss_dssp S-SCEEEE
T ss_pred C-CCeEEE
Confidence 5 787543
No 298
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=91.55 E-value=2.3 Score=42.70 Aligned_cols=126 Identities=16% Similarity=0.191 Sum_probs=85.7
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++...+.++++.+.|...+||-= |. -+.++-++++++++++. |+++.+ +.|+......
T Consensus 143 ~~~~~~~~~~~a~~~~~~G~~~~K~Kv-------g~------~~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~~ 204 (377)
T 3my9_A 143 ADPDFDADLERMRAMVPAGHTVFKMKT-------GV------KPHAEELRILETMRGEF---GERIDL--RLDFNQALTP 204 (377)
T ss_dssp CCSSHHHHHHHHHHHTTTTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHH---GGGSEE--EEECTTCCCT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcc-------CC------CcHHHHHHHHHHHHHHh---CCCCeE--EEeCCCCcCH
Confidence 345777777778888888999999832 22 13456688898888775 455555 4477777778
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh---cC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE---LG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e---lG-v~~Vs~p~~ 312 (456)
++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++.+ .| +..|..-..
T Consensus 205 ~~A~~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 205 FGAMKILRDVDAFRPT--FIEQPVPRRHLDAMAGFAAALD-TPILAD-----ES--CFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp TTHHHHHHHHHTTCCS--CEECCSCTTCHHHHHHHHHHCS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEECCHH
T ss_pred HHHHHHHHHHhhcCCC--EEECCCCccCHHHHHHHHHhCC-CCEEEC-----Cc--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999998755 55653 25788999998876 787654 21 235555443 45 666665444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
-
T Consensus 275 ~ 275 (377)
T 3my9_A 275 K 275 (377)
T ss_dssp H
T ss_pred c
Confidence 3
No 299
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.53 E-value=0.54 Score=49.65 Aligned_cols=87 Identities=17% Similarity=0.095 Sum_probs=56.5
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchH----HhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFS----ISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNA 164 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~a----vSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~ 164 (456)
-++++-++.+.-.|+.+.++|+|+|.++..+ ......| .+ .+.-+.+..+...++..++|||+|. |..++
T Consensus 298 ~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g---~g-~p~~~~l~~v~~~~~~~~iPVIa~G--GI~~~ 371 (511)
T 3usb_A 298 LNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAG---VG-VPQLTAVYDCATEARKHGIPVIADG--GIKYS 371 (511)
T ss_dssp SEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHC---CC-CCHHHHHHHHHHHHHTTTCCEEEES--CCCSH
T ss_pred ceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccC---CC-CCcHHHHHHHHHHHHhCCCcEEEeC--CCCCH
Confidence 3677778999999999999999999985211 1100112 11 2333445555566677789999984 33355
Q ss_pred HHHHHHHHHHHHhCccEEEeC
Q 012815 165 MNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IE 185 (456)
.++. +..++||+||.+=
T Consensus 372 ~di~----kala~GA~~V~vG 388 (511)
T 3usb_A 372 GDMV----KALAAGAHVVMLG 388 (511)
T ss_dssp HHHH----HHHHTTCSEEEES
T ss_pred HHHH----HHHHhCchhheec
Confidence 4555 3456899999983
No 300
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.51 E-value=0.85 Score=42.98 Aligned_cols=179 Identities=13% Similarity=0.106 Sum_probs=94.1
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI 182 (456)
+.++++|.+.+.+-= +.-.=.|. +++ -...++.+.+.+++|+.+++=. + |+ .+-++.+.++||+||
T Consensus 24 ~~~~~~Gad~ihldi----~DG~fvp~---~~~--g~~~v~~lr~~~~~~~~vhlmv-~-dp---~~~i~~~~~aGadgv 89 (230)
T 1tqj_A 24 KAVDEAGADWIHVDV----MDGRFVPN---ITI--GPLIVDAIRPLTKKTLDVHLMI-V-EP---EKYVEDFAKAGADII 89 (230)
T ss_dssp HHHHHTTCSEEEEEE----EBSSSSSC---BCB--CHHHHHHHGGGCCSEEEEEEES-S-SG---GGTHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEEEE----EecCCCcc---hhh--hHHHHHHHHhhcCCcEEEEEEc-c-CH---HHHHHHHHHcCCCEE
Confidence 445667888876552 00000132 222 2256677776667777666533 2 44 334578889999999
Q ss_pred EeCCC--CCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 183 ILEDQ--VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 183 ~IEDq--~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
++=+. . + ++..+-+++++.. |....+-...... .++.+++.+ ++|.|++-
T Consensus 90 ~vh~e~~~----~-----------~~~~~~~~~i~~~----g~~~gv~~~p~t~--------~e~~~~~~~-~~D~v~~m 141 (230)
T 1tqj_A 90 SVHVEHNA----S-----------PHLHRTLCQIREL----GKKAGAVLNPSTP--------LDFLEYVLP-VCDLILIM 141 (230)
T ss_dssp EEECSTTT----C-----------TTHHHHHHHHHHT----TCEEEEEECTTCC--------GGGGTTTGG-GCSEEEEE
T ss_pred EECccccc----c-----------hhHHHHHHHHHHc----CCcEEEEEeCCCc--------HHHHHHHHh-cCCEEEEE
Confidence 77543 2 0 1112223333322 2222222211111 234455554 79988654
Q ss_pred cC-----------CCHHHHHHHHHhCC----CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHH
Q 012815 261 AL-----------ASKEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDAL 325 (456)
Q Consensus 261 ~~-----------~s~eei~~i~~~v~----~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l 325 (456)
++ ...+.++++.+..+ .+|+. ..||-++ -+..++.+.|++.++.+..++.+. -...+.
T Consensus 142 sv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~----v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~--d~~~~~ 214 (230)
T 1tqj_A 142 SVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIE----VDGGLKP-NNTWQVLEAGANAIVAGSAVFNAP--NYAEAI 214 (230)
T ss_dssp SSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEE----EESSCCT-TTTHHHHHHTCCEEEESHHHHTSS--CHHHHH
T ss_pred EeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEE----EECCcCH-HHHHHHHHcCCCEEEECHHHHCCC--CHHHHH
Confidence 32 12455566655441 24433 2345444 578999999999999998887641 133445
Q ss_pred HHHHc
Q 012815 326 TAIKG 330 (456)
Q Consensus 326 ~~i~~ 330 (456)
+.|++
T Consensus 215 ~~l~~ 219 (230)
T 1tqj_A 215 AGVRN 219 (230)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55543
No 301
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=91.50 E-value=1.1 Score=42.56 Aligned_cols=140 Identities=17% Similarity=0.123 Sum_probs=83.8
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
-++.+|.|..........++..++.||+.|-+==.. |.. .| ..+++.+-|++.+++... ..+.+|-=|
T Consensus 59 ~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vini-----g~~~~g----~~~~v~~ei~~v~~a~~~--~~lkvIlet 127 (220)
T 1ub3_A 59 TVVGFPLGYQEKEVKALEAALACARGADEVDMVLHL-----GRAKAG----DLDYLEAEVRAVREAVPQ--AVLKVILET 127 (220)
T ss_dssp EEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHSTT--SEEEEECCG
T ss_pred EEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccc-----hhhhCC----CHHHHHHHHHHHHHHHcC--CCceEEEec
Confidence 345888887666666667788899999998552211 111 11 236678888888888753 345555544
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEEEec-----cCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCE
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVLFID-----ALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKL 306 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~Ifie-----~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~ 306 (456)
..+ .-++...-++...++|||.|=.- +-.+.+.++.+.+.+. -++++-+ . ||....-+..++-++|..|
T Consensus 128 ~~l---~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg-~~v~Vka-a-GGirt~~~al~~i~aGa~R 201 (220)
T 1ub3_A 128 GYF---SPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQ-GRAQVKA-A-GGIRDRETALRMLKAGASR 201 (220)
T ss_dssp GGS---CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHT-TSSEEEE-E-SSCCSHHHHHHHHHTTCSE
T ss_pred CCC---CHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhC-CCCeEEE-E-CCCCCHHHHHHHHHCCCcc
Confidence 332 23565666788889999999654 3235566666666543 2333322 2 3322112345566799997
Q ss_pred Eec
Q 012815 307 VAY 309 (456)
Q Consensus 307 Vs~ 309 (456)
+-.
T Consensus 202 iG~ 204 (220)
T 1ub3_A 202 LGT 204 (220)
T ss_dssp EEE
T ss_pred cch
Confidence 744
No 302
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.38 E-value=1.7 Score=42.83 Aligned_cols=174 Identities=14% Similarity=0.111 Sum_probs=100.0
Q ss_pred HHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCC
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN 159 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~Dt 159 (456)
+||+=+|..+ ..++.--=.-=++.+.++|++.|=++++... ...|-. -..+++ .+.+.+..+.++.+=.+
T Consensus 13 TlRDG~Q~~~-~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~---~~~p~~--~d~~~~---~~~~~~~~~~~~~~l~~- 82 (307)
T 1ydo_A 13 GPRDGLQNEP-VWIATEDKITWINQLSRTGLSYIEITSFVHP---KWIPAL--RDAIDV---AKGIDREKGVTYAALVP- 82 (307)
T ss_dssp HHHHTGGGSS-SCCCHHHHHHHHHHHHTTTCSEEEEEECSCT---TTCGGG--TTHHHH---HHHSCCCTTCEEEEECC-
T ss_pred CCCCCcCCCC-CCCCHHHHHHHHHHHHHcCCCEEEECCCcCc---cccccc--CCHHHH---HHHhhhcCCCeEEEEeC-
Confidence 4666555443 2222222222356677899999998864321 123321 123343 34444434455555443
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh-----
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR----- 234 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~----- 234 (456)
+ .+.++...++|+..|+|-+..++- |...+--.+.+|..++++.+++..++.|......- ..++
T Consensus 83 ---~----~~~i~~a~~~g~~~v~i~~~~sd~---~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i-~~~~~~~~~ 151 (307)
T 1ydo_A 83 ---N----QRGLENALEGGINEACVFMSASET---HNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL-STVFGCPYE 151 (307)
T ss_dssp ---S----HHHHHHHHHHTCSEEEEEEESSHH---HHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE-ECTTCBTTT
T ss_pred ---C----HHhHHHHHhCCcCEEEEEeecCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-EEEecCCcC
Confidence 2 345667778999999998765321 21111113678888888888887776653322111 1111
Q ss_pred hcccHHHHHHHHHHhHhcCCCEEEec---cCCCHHHHHHHHHh
Q 012815 235 QALSLEESLRRSRAFADAGADVLFID---ALASKEEMKAFCEI 274 (456)
Q Consensus 235 ~~~~ldeAI~RakAy~eAGAD~Ifie---~~~s~eei~~i~~~ 274 (456)
.....+..++-+++..++|||.|.+. |.-+++++.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~ 194 (307)
T 1ydo_A 152 KDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEA 194 (307)
T ss_dssp BCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHH
Confidence 22467889999999999999999875 34556666665543
No 303
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=91.32 E-value=0.77 Score=47.73 Aligned_cols=121 Identities=21% Similarity=0.230 Sum_probs=83.6
Q ss_pred CCHHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 162 GNAMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 162 G~~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.+++.+.+.++++.+. |...+||-- |. .+.++-+++|+|++++. +++-| +.|+......+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----~~~~L--~vDaN~~w~~~ 250 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKG-------GV------FPPADEVAAIKALHKAF----PGVPL--RLDPNAAWTVE 250 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEEC-------SS------SCHHHHHHHHHHHHHHS----TTCCE--EEECTTCBCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcc-------CC------CCHHHHHHHHHHHHHhC----CCCcE--eeeCCCCCCHH
Confidence 3578888888888764 999999942 22 14456688999988876 23333 45888888899
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC-CCEEec
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAY 309 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v~~Vs~ 309 (456)
+|++.++++.+. ..|+|-+ ++.+.++++.+..+ +|+..+-.. +......++-+.| +..+..
T Consensus 251 ~Ai~~~~~L~~~---l~~iEeP~~d~~~~~~l~~~~~-iPIa~dE~~----~~~~~~~~~i~~~a~div~~ 313 (445)
T 3va8_A 251 TSKWVAKELEGI---VEYLEDPAGEIEGMAAVAKEAS-MPLATNMAV----VAFDHLPPSILQDAVQVILS 313 (445)
T ss_dssp HHHHHHHHTTTT---CSEEESCBSHHHHHHHHHTTCS-SCEEESSSC----CSGGGHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhhh---cCeEeecCcCHHHHHHHHHcCC-CCEEeCCcc----CCHHHHHHHHHcCCCCEEEe
Confidence 999999999875 6678764 56788889988876 787654211 1112345666666 454444
No 304
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=91.32 E-value=1.4 Score=44.95 Aligned_cols=98 Identities=11% Similarity=0.166 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
.+....+.++.+.+.|...+++--. .. .++.++++++++++. |+++-| +.|+......++|
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g-------~~-------~~~~~~~v~~vR~~~---g~~~~l--~vDaN~~~~~~~A 248 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASP-------VA-------DDGVAKEMEILRERL---GPAVRI--ACDMHWAHTASEA 248 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGG-------GC-------TTCHHHHHHHHHHHH---CSSSEE--EEECCSCCCHHHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccc-------cc-------hhhHHHHHHHHHhcc---CCeEEE--EeccccCCCHHHH
Confidence 3577888889999999999998322 11 123456777766553 667655 5688888889999
Q ss_pred HHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 243 LRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
++.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+.+
T Consensus 249 ~~~~~~l~~~~--l~~iEqP~~~~d~~~~~~l~~~~~-iPIa~ 288 (412)
T 4h1z_A 249 VALIKAMEPHG--LWFAEAPVRTEDIDGLARVAASVS-TAIAV 288 (412)
T ss_dssp HHHHHHHGGGC--EEEEECCSCTTCHHHHHHHHHHCS-SEEEE
T ss_pred HHHHHhhcccc--cceecCCCCccchHHHHHHHhhcC-Ccccc
Confidence 99999999885 6788875 36788999999887 77654
No 305
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=91.31 E-value=0.84 Score=43.93 Aligned_cols=92 Identities=22% Similarity=0.277 Sum_probs=55.3
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~ 157 (456)
.+..++++..+-.+....+.+.--++.++++|.+.|...+ ++ .|... +..+ .+ ..+.+.+.+++||+++.
T Consensus 116 ~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~-~~----~Gt~~-~~~~-~~---~l~~i~~~~~iPviv~g 185 (264)
T 1xm3_A 116 LKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGA-SP----IGSGQ-GILN-PL---NLSFIIEQAKVPVIVDA 185 (264)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECS-SS----TTCCC-CCSC-HH---HHHHHHHHCSSCBEEES
T ss_pred HHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECC-cc----cCCCC-CCCC-HH---HHHHHHhcCCCCEEEEe
Confidence 3445555554433333456677788888999999883312 11 12211 1223 22 44555566789999983
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
|-.+++++ +++.++||+||.+=
T Consensus 186 --GI~t~eda----~~~~~~GAdgViVG 207 (264)
T 1xm3_A 186 --GIGSPKDA----AYAMELGADGVLLN 207 (264)
T ss_dssp --CCCSHHHH----HHHHHTTCSEEEES
T ss_pred --CCCCHHHH----HHHHHcCCCEEEEc
Confidence 55566554 46778999999883
No 306
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=91.29 E-value=1.8 Score=43.21 Aligned_cols=173 Identities=18% Similarity=0.109 Sum_probs=101.9
Q ss_pred HHHHHHhCCCceeecccCChH-HHH-HHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh------cc-C
Q 012815 80 SLRQILELPGVHQGPACFDAL-SAK-LVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ------AV-S 150 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDal-SAr-l~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r------a~-~ 150 (456)
+||+=++..... ++ .-|-+ =++ .+.++|++.|=+++... -|+ + .+.++++++ .. +
T Consensus 26 TlRDG~Q~~~~~-~~-~~~k~~i~~~~L~~~Gv~~IE~g~~~~------~~~----~----~~~v~~~~~~~~~~~~~~~ 89 (337)
T 3ble_A 26 TLRDGEQTRGVS-FS-TSEKLNIAKFLLQKLNVDRVEIASARV------SKG----E----LETVQKIMEWAATEQLTER 89 (337)
T ss_dssp HHHHHTTSTTCC-CC-HHHHHHHHHHHHHTTCCSEEEEEETTS------CTT----H----HHHHHHHHHHHHHTTCGGG
T ss_pred CCCCCCCCCCCC-cC-HHHHHHHHHHHHHHcCCCEEEEeCCCC------Chh----H----HHHHHHHHhhhhhhccCCC
Confidence 577777655321 22 12222 256 67789999998876442 122 1 223333333 22 3
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
..+.+...+. +-++...++|+..|+|=+..++. |...+-=.+.++..++++.+++..++.|..+.+..=
T Consensus 90 ~~i~~l~~~~--------~~i~~a~~~g~~~v~i~~~~s~~---~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~ 158 (337)
T 3ble_A 90 IEILGFVDGN--------KTVDWIKDSGAKVLNLLTKGSLH---HLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLE 158 (337)
T ss_dssp EEEEEESSTT--------HHHHHHHHHTCCEEEEEEECSHH---HHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CeEEEEccch--------hhHHHHHHCCCCEEEEEEecCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 5677765542 15677788999999997765432 211111136788888988888877776644333322
Q ss_pred cch--hhcccHHHHHHHHHHhHhcCCCEEEecc---CCCHHHHHHHH----HhCCCCce
Q 012815 231 TDS--RQALSLEESLRRSRAFADAGADVLFIDA---LASKEEMKAFC----EISPLVPK 280 (456)
Q Consensus 231 TDA--~~~~~ldeAI~RakAy~eAGAD~Ifie~---~~s~eei~~i~----~~v~~vP~ 280 (456)
|. ......+..++.+++..++|||.|.+.- .-.++++.++. +.+|.+|+
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i 216 (337)
T 3ble_A 159 -DWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHF 216 (337)
T ss_dssp -THHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCE
T ss_pred -ECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeE
Confidence 20 1234578889999999999999998742 34555555444 55654443
No 307
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.26 E-value=0.54 Score=49.66 Aligned_cols=118 Identities=17% Similarity=0.289 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHH
Q 012815 166 NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (456)
Q Consensus 166 nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~R 245 (456)
...+.++.+.++|++.|.|-.. +||.. ...+.|+.+++.- ++..|++-+-. . .+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a-----~g~~~--------~v~~~i~~i~~~~----~~~~vi~g~v~----t----~e~ 310 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA-----HGHSQ--------GVIDKVKEVRAKY----PSLNIIAGNVA----T----AEA 310 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS-----CTTSH--------HHHHHHHHHHHHC----TTSEEEEEEEC----S----HHH
T ss_pred chHHHHHHHHhhccceEEeccc-----ccchh--------hhhhHHHHHHHhC----CCceEEeeeec----c----HHH
Confidence 3466678899999999999543 45532 2344444444332 34444442211 1 355
Q ss_pred HHHhHhcCCCEEEec---------------cCCCHHHHHHH---HHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 246 SRAFADAGADVLFID---------------ALASKEEMKAF---CEISPLVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 246 akAy~eAGAD~Ifie---------------~~~s~eei~~i---~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
|+.+.++|||+|.+- +.++.+.+.++ ++.+. +|+++. ||-...-.....-++|..-|
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~-iPVIa~----GGI~~~~di~kala~GA~~V 385 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHG-IPVIAD----GGIKYSGDMVKALAAGAHVV 385 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTT-CCEEEE----SCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCC-CcEEEe----CCCCCHHHHHHHHHhCchhh
Confidence 788899999999871 13444444444 44443 676543 34321122344556899999
Q ss_pred eccchH
Q 012815 308 AYPLSL 313 (456)
Q Consensus 308 s~p~~l 313 (456)
..|..+
T Consensus 386 ~vGs~~ 391 (511)
T 3usb_A 386 MLGSMF 391 (511)
T ss_dssp EESTTT
T ss_pred eecHHH
Confidence 888754
No 308
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=91.12 E-value=2.6 Score=39.12 Aligned_cols=108 Identities=17% Similarity=0.101 Sum_probs=66.6
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
..++..+++||+++|.- +. +. +. +++ ++..|.++++-..| .+| +..
T Consensus 74 d~~~~A~~~GAd~v~~~-~~--------------d~-~v---~~~----~~~~g~~~i~G~~t-------~~e----~~~ 119 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSP-GL--------------LE-EV---AAL----AQARGVPYLPGVLT-------PTE----VER 119 (207)
T ss_dssp HHHHHHHHHTCSEEEES-SC--------------CH-HH---HHH----HHHHTCCEEEEECS-------HHH----HHH
T ss_pred HHHHHHHHcCCCEEEcC-CC--------------CH-HH---HHH----HHHhCCCEEecCCC-------HHH----HHH
Confidence 66778889999999863 32 11 11 122 22236666654333 223 344
Q ss_pred hHhcCCCEEEecc-CC--CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 249 FADAGADVLFIDA-LA--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 249 y~eAGAD~Ifie~-~~--s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
..++|||.|-+.. .. ..+.++++.+.+|.+|++ ..||-++ -+..++.+.|+..|..+..++.
T Consensus 120 A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~~ipvv----aiGGI~~-~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 120 ALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFL----PTGGIKE-EHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEE----EBSSCCG-GGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHCCCCEEEEecCccccCHHHHHHHHhhCCCCcEE----EeCCCCH-HHHHHHHhCCCcEEEEehhhhC
Confidence 4578999885532 11 346778888877656654 3345543 4678899999999888877654
No 309
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=91.10 E-value=0.85 Score=42.74 Aligned_cols=137 Identities=16% Similarity=0.107 Sum_probs=83.6
Q ss_pred HHHHHhccCCcEEEeCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 142 GQLITQAVSIPVIGDGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 142 ~r~I~ra~~iPVIaD~DtGYG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
++.+.+ .+.+|++|.=.+ + +..+...++.+.++||++|.+---. | .+ -|+++++...
T Consensus 51 v~~l~~-~~~~v~lD~K~~--DI~nT~~~~v~~~~~~GaD~vTvh~~~---------G------~~---~l~~~~~~~~- 108 (213)
T 1vqt_A 51 FDELAK-RNLKIILDLKFC--DIPSTVERSIKSWDHPAIIGFTVHSCA---------G------YE---SVERALSATD- 108 (213)
T ss_dssp HHHHHT-TTCEEEEEEEEC--SCHHHHHHHHHHHCCTTEEEEEEEGGG---------C------HH---HHHHHHHHCS-
T ss_pred HHHHHH-CCCCEEEEeecc--cCchHHHHHHHHHHHCCCCEEEEeccC---------C------HH---HHHHHHHhcC-
Confidence 333444 378999998765 4 3457778889999999999883321 1 12 2444444432
Q ss_pred hCCCeEEEEecchhhcccH-HHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCC------
Q 012815 221 SGSDIVIVARTDSRQALSL-EESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPI------ 293 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~l-deAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~------ 293 (456)
+..+.|...|.-.. . + +....+++. .++|+| ++. +.++++++.+..+. | -+. ||-.|.
T Consensus 109 -~~~~~V~~lts~~~-~-l~~~v~~~a~~-~e~G~d-vV~----~~~~~~~ir~~~~~-~---~v~--pGI~~~~~~~dq 173 (213)
T 1vqt_A 109 -KHVFVVVKLTSMEG-S-LEDYMDRIEKL-NKLGCD-FVL----PGPWAKALREKIKG-K---ILV--PGIRMEVKADDQ 173 (213)
T ss_dssp -SEEEEECCCTTSCC-C-HHHHHHHHHHH-HHHTCE-EEC----CHHHHHHHTTTCCS-C---EEE--CCBC--------
T ss_pred -CCeEEEEEeCCCCH-H-HHHHHHHHHHH-hcCCCE-EEE----cHHHHHHHHHHCCC-C---EEE--CCCCCCCCccch
Confidence 11233333343222 2 5 667778888 999999 333 23688887776552 3 122 342232
Q ss_pred ---CCHHHHHhcCCCEEeccchHHHH
Q 012815 294 ---LNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 294 ---lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.|+++ .+.|.+.++.|-..+.+
T Consensus 174 ~rv~t~~~-i~aGad~iVvGR~I~~a 198 (213)
T 1vqt_A 174 KDVVTLEE-MKGIANFAVLGREIYLS 198 (213)
T ss_dssp -CCBCHHH-HTTTCSEEEESHHHHTS
T ss_pred hhcCCHHH-HHCCCCEEEEChhhcCC
Confidence 24778 89999999999887754
No 310
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=91.08 E-value=7.9 Score=41.39 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=88.9
Q ss_pred HHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCC--CCCC-HHH-HHHHHHHHH
Q 012815 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN--GYGN-AMN-VKRTVKGYI 175 (456)
Q Consensus 100 lSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~Dt--GYG~-~~n-v~rtVk~l~ 175 (456)
-=|+.+.++|++.|=+++.+.--+.+.+- .-+-.|++..++.....+.+-+.+-..+ ||.. +.+ +.+.++...
T Consensus 51 ~Ia~~L~~~Gv~~IE~G~patF~~~~rfl---~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~ 127 (539)
T 1rqb_A 51 GACADIDAAGYWSVECWGGATYDSCIRFL---NEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSA 127 (539)
T ss_dssp GGHHHHHHTTCSEEEEEETTHHHHHHHTS---CCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcccccccchhcc---CCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHH
Confidence 33677788999999988532100101110 1133455555444222222333333333 6764 333 677889999
Q ss_pred HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE-EEEecchhhcccHHHHHHHHHHhHhcCC
Q 012815 176 KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV-IVARTDSRQALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 176 ~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv-IiARTDA~~~~~ldeAI~RakAy~eAGA 254 (456)
++|++.|+|=+..+. + + .++.+++..++.|.... .+.=+|+. ....+..++-+++..++||
T Consensus 128 ~aGvd~vrIf~s~sd----------~---~----ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 128 ENGMDVFRVFDAMND----------P---R----NMAHAMAAVKKAGKHAQGTICYTISP-VHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp HTTCCEEEECCTTCC----------T---H----HHHHHHHHHHHTTCEEEEEEECCCST-TCCHHHHHHHHHHHHHTTC
T ss_pred hCCCCEEEEEEehhH----------H---H----HHHHHHHHHHHCCCeEEEEEEeeeCC-CCCHHHHHHHHHHHHHcCC
Confidence 999999999886521 1 2 33444444444443221 12223432 3467899999999999999
Q ss_pred CEEEec---cCCCHHHHHH----HHHhCC-CCc
Q 012815 255 DVLFID---ALASKEEMKA----FCEISP-LVP 279 (456)
Q Consensus 255 D~Ifie---~~~s~eei~~----i~~~v~-~vP 279 (456)
|.|.+. |+-.+.++.+ +.+++| .+|
T Consensus 190 d~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~ 222 (539)
T 1rqb_A 190 DSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQ 222 (539)
T ss_dssp SEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCC
T ss_pred CEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCce
Confidence 999875 3344455444 445564 344
No 311
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=91.06 E-value=1.2 Score=44.82 Aligned_cols=128 Identities=15% Similarity=0.162 Sum_probs=87.3
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC-CCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG-SDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G-~dfvIiARTDA~~~~~ 238 (456)
|+++++...+.++++.+.|...++|- .|. .+.++-+++|++++++. | +++.| |.|+.....
T Consensus 159 ~~~~~e~~~~~a~~~~~~G~~~~K~K-------vg~------~~~~~d~~~v~avr~~~---g~~~~~l--~vDaN~~~~ 220 (377)
T 2pge_A 159 WMGEAAFMQEQIEAKLAEGYGCLKLK-------IGA------IDFDKECALLAGIRESF---SPQQLEI--RVDANGAFS 220 (377)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEE-------C---------CHHHHHHHHHHHHHHS---CTTTCEE--EEECTTBBC
T ss_pred cCCCHHHHHHHHHHHHHHhhhhheee-------cCC------CChHHHHHHHHHHHHHc---CCCCceE--EEECCCCCC
Confidence 45678778888888889999999973 121 14577788999888764 5 55544 458877778
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCC--HHHHHhcC-CCEEeccch
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILN--PLELEELG-FKLVAYPLS 312 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt--~~eL~elG-v~~Vs~p~~ 312 (456)
.++|++.+++..+.+ ..|+|-+ .+.+.++++++..+ +|+...=... +. .. ..++-+.| ++.+..=+.
T Consensus 221 ~~~a~~~~~~l~~~~--i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~dE~~~---~~-~~~~~~~~i~~~a~d~i~ik~~ 293 (377)
T 2pge_A 221 PANAPQRLKRLSQFH--LHSIEQPIRQHQWSEMAALCANSP-LAIALDEELI---GL-GAEQRSAMLDAIRPQYIILKPS 293 (377)
T ss_dssp TTTHHHHHHHHHTTC--CSEEECCBCSSCHHHHHHHHHHCS-SCEEESGGGT---TC-CTHHHHHHHHHHCCSEEEECHH
T ss_pred HHHHHHHHHHHhcCC--CcEEEccCCcccHHHHHHHHhhCC-CcEEECCccC---Cc-chHHHHHHHHhCCCCEEEECch
Confidence 899999999998875 5688875 46788999998876 7876552221 11 23 33554444 666655343
No 312
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=91.03 E-value=1.3 Score=41.00 Aligned_cols=166 Identities=15% Similarity=0.165 Sum_probs=90.3
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcc--cCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLA--LPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGF 179 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG--~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGa 179 (456)
++.+.++|.+.+-+.- ..| +|... .. ++.++.+.+.++.|+.++. |=+. ..+.++.+.++|+
T Consensus 29 i~~~~~~G~d~i~l~~------~dg~f~~~~~-~~----~~~i~~l~~~~~~~~~v~l---~vnd--~~~~v~~~~~~Ga 92 (230)
T 1rpx_A 29 VKAIEQAGCDWIHVDV------MDGRFVPNIT-IG----PLVVDSLRPITDLPLDVHL---MIVE--PDQRVPDFIKAGA 92 (230)
T ss_dssp HHHHHHTTCCCEEEEE------EBSSSSSCBC-CC----HHHHHHHGGGCCSCEEEEE---ESSS--HHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEee------ccCCcccccc-cC----HHHHHHHHhccCCcEEEEE---EecC--HHHHHHHHHHcCC
Confidence 3556677888776641 011 23221 12 3566777776678888875 4332 2356778888999
Q ss_pred cEEEeCCC--CCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 180 AGIILEDQ--VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 180 aGI~IEDq--~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
++|++-+. .. + ...+.++.+ ++ .|..+.+...+.. . .++.++|. .|+|.|
T Consensus 93 d~v~vh~~~~~~----------~--~~~~~~~~~---~~----~g~~ig~~~~p~t----~----~e~~~~~~-~~~d~v 144 (230)
T 1rpx_A 93 DIVSVHCEQSST----------I--HLHRTINQI---KS----LGAKAGVVLNPGT----P----LTAIEYVL-DAVDLV 144 (230)
T ss_dssp SEEEEECSTTTC----------S--CHHHHHHHH---HH----TTSEEEEEECTTC----C----GGGGTTTT-TTCSEE
T ss_pred CEEEEEecCccc----------h--hHHHHHHHH---HH----cCCcEEEEeCCCC----C----HHHHHHHH-hhCCEE
Confidence 99988554 20 0 112333332 22 1322233332211 1 13344443 679988
Q ss_pred EeccCC--------C---HHHHHHHHHhCC----CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 258 FIDALA--------S---KEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 258 fie~~~--------s---~eei~~i~~~v~----~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
++-++. . .+.++++.+..+ .+|+.+ .||-+| -+..++.+.|...|..+..++.+
T Consensus 145 l~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~-~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 145 LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGP-KNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp EEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCT-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCH-HHHHHHHHcCCCEEEEChhhhCC
Confidence 654421 1 244455554431 244332 245544 56778999999999999888764
No 313
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=91.00 E-value=5.3 Score=40.24 Aligned_cols=153 Identities=12% Similarity=0.039 Sum_probs=86.4
Q ss_pred HHHHHHHHhCCcEEEec---chHHhh----hhcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCC-----CC--
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISA----ARLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGD-----NG-- 160 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSa----s~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~D-----tG-- 160 (456)
-.|+.+.++|||+|=+- ||-+.- ...-..|.---+++. +++.+++|+++++ -||.+-+- .|
T Consensus 165 ~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 165 QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 45677888999999985 332221 011123321123432 3444566666653 28888222 11
Q ss_pred CCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
-+. .++..+.++.++++|++.|++-..... +++-.+. +++.+|+.+ .+..++.+++-+
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------~~~~~~~-~~~~~i~~~------~~iPvi~~Ggi~------- 303 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWD-------DAPDTPV-SFKRALREA------YQGVLIYAGRYN------- 303 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTT-------BCCCCCH-HHHHHHHHH------CCSEEEEESSCC-------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC-------CCCCccH-HHHHHHHHH------CCCcEEEeCCCC-------
Confidence 123 356788899999999999999654321 1111333 444454432 223455555541
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.+..+.++| ||+|.+-. +.+++..+++.+..+
T Consensus 304 ---~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~g~~ 340 (365)
T 2gou_A 304 ---AEKAEQAINDGLADMIGFGRPFIANPDLPERLRHGYP 340 (365)
T ss_dssp ---HHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHTCC
T ss_pred ---HHHHHHHHHCCCcceehhcHHHHhCchHHHHHHcCCC
Confidence 24566777788 99998843 345567777776544
No 314
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=90.98 E-value=2.5 Score=41.70 Aligned_cols=101 Identities=11% Similarity=0.077 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+++.+.+.++++.+.|...+||-- |. -+.++-+++|++++++. |+++-+ |.|+......++|
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKv-------g~------~~~~~d~~~v~avr~~~---g~~~~L--~vDaN~~~~~~~A 177 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKV-------GV------MSPEEEQAILKALLAAL---PPGAKL--RLDANGSWDRATA 177 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHS---CTTCEE--EEECTTCCCHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEe-------CC------CChHHHHHHHHHHHHHc---CCCCEE--EEcccCCCCHHHH
Confidence 455677788888899999999832 21 13455678888887764 555444 4488877889999
Q ss_pred HHHHHHhHhc-CCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 243 LRRSRAFADA-GADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 243 I~RakAy~eA-GAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
++.++++.+. +.+..|+|-+ .+.+.++++.+..+ +|+..
T Consensus 178 ~~~~~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~-ipIa~ 220 (332)
T 2ozt_A 178 NRWFAWLDRHGNGKIEYVEQPLPPDQWQALLSLAQTVT-TAIAL 220 (332)
T ss_dssp HHHHHHHHHHCCTTEEEEECCSCTTCHHHHHHHHHHCS-SCEEE
T ss_pred HHHHHHHHhhccCCcceeECCCCCCCHHHHHHHHHhCC-CCEEe
Confidence 9999999886 5578899875 36788889998876 67654
No 315
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=90.97 E-value=7.5 Score=37.19 Aligned_cols=136 Identities=10% Similarity=0.047 Sum_probs=83.8
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecch
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS 233 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA 233 (456)
++.++.|..........++..++.||+.|-+==.. |. +.. ++.+-|++.+++....|..+.+|-=|..
T Consensus 77 vigFP~G~~~~~~k~~e~~~Av~~GAdEID~vini-----g~-----~~~--~v~~ei~~v~~a~~~~g~~lKvIlEt~~ 144 (234)
T 1n7k_A 77 VIGFPLGQAPLEVKLVEAQTVLEAGATELDVVPHL-----SL-----GPE--AVYREVSGIVKLAKSYGAVVKVILEAPL 144 (234)
T ss_dssp EESTTTCCSCHHHHHHHHHHHHHHTCCEEEECCCG-----GG-----CHH--HHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred EeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccc-----hH-----HHH--HHHHHHHHHHHHHhhcCCeEEEEEeccC
Confidence 45788887666666667788899999998652211 21 212 7788888888887653334444554433
Q ss_pred hhcccHHHHHHHHHHhHhcCCCEEEecc-C-----CCHHHHHH--HHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCC
Q 012815 234 RQALSLEESLRRSRAFADAGADVLFIDA-L-----ASKEEMKA--FCEISPLVPKMANMLEGGGKTPILNPLELEELGFK 305 (456)
Q Consensus 234 ~~~~~ldeAI~RakAy~eAGAD~Ifie~-~-----~s~eei~~--i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~ 305 (456)
. .-++...-++...++|||.|=.-. . .+.+.++. +.+.+. +|+-+ .+|-++ .-...++-++|..
T Consensus 145 L---~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l~~m~~~v~-v~VKa---aGGirt-~~~al~~i~aGa~ 216 (234)
T 1n7k_A 145 W---DDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRLASLAKPLG-MGVKA---SGGIRS-GIDAVLAVGAGAD 216 (234)
T ss_dssp S---CHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHHHHHHGGGT-CEEEE---ESSCCS-HHHHHHHHHTTCS
T ss_pred C---CHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEE---ecCCCC-HHHHHHHHHcCcc
Confidence 2 225656667888899999997652 1 24566666 766665 55432 232222 1234556789999
Q ss_pred EEec
Q 012815 306 LVAY 309 (456)
Q Consensus 306 ~Vs~ 309 (456)
|+-.
T Consensus 217 RiG~ 220 (234)
T 1n7k_A 217 IIGT 220 (234)
T ss_dssp EEEE
T ss_pred ccch
Confidence 7743
No 316
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.95 E-value=6 Score=36.27 Aligned_cols=144 Identities=17% Similarity=0.125 Sum_probs=86.9
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI 182 (456)
..+-+.|+++|.+. .++ ++.+++.+.++.+++..+++++++-+ ++...++|+.||
T Consensus 20 ~~a~~~Gv~~v~lr----------~k~---~~~~~~~~~i~~l~~~~~~~livnd~------------~~~A~~~gadgv 74 (210)
T 3ceu_A 20 TALFEEGLDILHLR----------KPE---TPAMYSERLLTLIPEKYHRRIVTHEH------------FYLKEEFNLMGI 74 (210)
T ss_dssp HHHHHTTCCEEEEC----------CSS---CCHHHHHHHHHHSCGGGGGGEEESSC------------TTHHHHTTCSEE
T ss_pred HHHHHCCCCEEEEc----------cCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------------HHHHHHcCCCEE
Confidence 33445677766544 122 56778888888888888899999621 145667899999
Q ss_pred EeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC
Q 012815 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL 262 (456)
Q Consensus 183 ~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~ 262 (456)
|+-... ++.|- + .+.++...+- ..+|+ .+| . +|||.|++..+
T Consensus 75 hl~~~~-~~~~~----------------------~-----~~~~ig~s~~-----t~~e~-~~A---~-~GaDyv~~g~v 116 (210)
T 3ceu_A 75 HLNARN-PSEPH----------------------D-----YAGHVSCSCH-----SVEEV-KNR---K-HFYDYVFMSPI 116 (210)
T ss_dssp ECCSSS-CSCCT----------------------T-----CCSEEEEEEC-----SHHHH-HTT---G-GGSSEEEECCC
T ss_pred EECccc-ccccc----------------------c-----cCCEEEEecC-----CHHHH-HHH---h-hCCCEEEECCc
Confidence 994332 11110 0 1234433332 23442 222 3 79999975332
Q ss_pred ------------CCHHHHHHHHHhC-CCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 263 ------------ASKEEMKAFCEIS-PLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 263 ------------~s~eei~~i~~~v-~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
...+.++++++.+ ..+|+++ .||-+| -+..++.+.|+.-|.....++
T Consensus 117 f~t~sk~~~~~~~g~~~l~~~~~~~~~~iPvia----iGGI~~-~nv~~~~~~Ga~gVav~s~i~ 176 (210)
T 3ceu_A 117 YDSISKVNYYSTYTAEELREAQKAKIIDSKVMA----LGGINE-DNLLEIKDFGFGGAVVLGDLW 176 (210)
T ss_dssp C---------CCCCHHHHHHHHHTTCSSTTEEE----ESSCCT-TTHHHHHHTTCSEEEESHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEE----ECCCCH-HHHHHHHHhCCCEEEEhHHhH
Confidence 2456777777763 3367643 245554 478899999999998876554
No 317
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=90.92 E-value=2.2 Score=43.62 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=47.8
Q ss_pred HHHHHhHhcCCCEEEec---------cCCCHHHHHHHHHhCC-CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 244 RRSRAFADAGADVLFID---------ALASKEEMKAFCEISP-LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie---------~~~s~eei~~i~~~v~-~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
+.++...++|||.|.+. ++++.+.+.++.+.++ .+|++++ +|-....+....-.+|.+.|..+..+
T Consensus 264 e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~~ 339 (392)
T 2nzl_A 264 DDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHHH
Confidence 45788899999999993 2355677788887764 3676543 34322223444455899999999887
Q ss_pred HHHH
Q 012815 314 IGVS 317 (456)
Q Consensus 314 l~aa 317 (456)
+.+.
T Consensus 340 l~~~ 343 (392)
T 2nzl_A 340 VWGL 343 (392)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7763
No 318
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=90.88 E-value=2.8 Score=42.61 Aligned_cols=153 Identities=16% Similarity=0.164 Sum_probs=93.6
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC-CcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS-IPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~-iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
|+.+.++|++.|=+++.. + + | .+ .+.++++++... ..+.+=. -++...+.++++.+..+|+.
T Consensus 40 a~~L~~~Gv~~IE~g~p~-~-~----~-------~d-~e~v~~i~~~~~~~~i~~l~---r~~~~di~~a~~al~~ag~~ 102 (370)
T 3rmj_A 40 ARQLEKLGVDIIEAGFAA-A-S----P-------GD-FEAVNAIAKTITKSTVCSLS---RAIERDIRQAGEAVAPAPKK 102 (370)
T ss_dssp HHHHHHHTCSEEEEEEGG-G-C----H-------HH-HHHHHHHHTTCSSSEEEEEE---ESSHHHHHHHHHHHTTSSSE
T ss_pred HHHHHHcCCCEEEEeCCC-C-C----H-------HH-HHHHHHHHHhCCCCeEEEEe---cCCHHHHHHHHHHHhhCCCC
Confidence 355678899988876432 1 0 1 12 133455555432 3332211 12566677777777779999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
-|+|=+.+++- |...+-=.+.+|..+++..+++.+++.|.++.+-+ .|+ .....+..++-+++..++|||.|.+.
T Consensus 103 ~v~if~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~-ed~-~r~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (370)
T 3rmj_A 103 RIHTFIATSPI---HMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSC-EDA-LRSEIDFLAEICGAVIEAGATTINIP 177 (370)
T ss_dssp EEEEEEECSHH---HHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEE-ETG-GGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEecCcHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEec-CCC-CccCHHHHHHHHHHHHHcCCCEEEec
Confidence 99998876432 21111124678999999888877776665543332 232 33467888999999999999999885
Q ss_pred c---CCCHHHHHHH----HHhCC
Q 012815 261 A---LASKEEMKAF----CEISP 276 (456)
Q Consensus 261 ~---~~s~eei~~i----~~~v~ 276 (456)
- .-.+.++.++ .+.+|
T Consensus 178 DT~G~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 178 DTVGYSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHST
T ss_pred CccCCcCHHHHHHHHHHHHHhCC
Confidence 3 3445555544 45555
No 319
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.88 E-value=1.7 Score=49.37 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=49.9
Q ss_pred HHHHHHHhCCcEEEec-chHHhhhhcccCCCCC---CCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTS-GFSISAARLALPDTGF---ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIK 176 (456)
Q Consensus 101 SArl~e~aGfdAI~vS-G~avSas~lG~PD~~~---lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~ 176 (456)
.|+.++++|+|+|-+. |... ..+..+.|. -..+.+.+.++.+.+.+++||++-+-.+.. ++.+.++.+++
T Consensus 653 ~a~~~~~~g~d~iein~~~P~---~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~---~~~~~a~~~~~ 726 (1025)
T 1gte_A 653 LSRKAEASGADALELNLSCPH---GMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVT---DIVSIARAAKE 726 (1025)
T ss_dssp HHHHHHHTTCSEEEEECCCBC---CCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSS---CHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCCC---CCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChH---HHHHHHHHHHH
Confidence 3566677899999986 2111 011111111 234556667788888889999997644333 35666788899
Q ss_pred hCccEEEe
Q 012815 177 AGFAGIIL 184 (456)
Q Consensus 177 AGaaGI~I 184 (456)
+|++||.+
T Consensus 727 ~G~d~i~v 734 (1025)
T 1gte_A 727 GGADGVTA 734 (1025)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 99999999
No 320
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.86 E-value=1.2 Score=40.54 Aligned_cols=76 Identities=18% Similarity=0.200 Sum_probs=51.6
Q ss_pred ceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccC--CcEEEeCCCCCCCHHHH
Q 012815 90 VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVS--IPVIGDGDNGYGNAMNV 167 (456)
Q Consensus 90 ~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~--iPVIaD~DtGYG~~~nv 167 (456)
.-+++++++...++.+.+.|+|.+.+- .. . ..+ ++..+.+++..+ +||+++ |+..
T Consensus 102 ~~~~~g~~t~~e~~~a~~~G~d~v~v~--~t--~--------~~g----~~~~~~l~~~~~~~ipvia~-----GGI~-- 158 (212)
T 2v82_A 102 MTVCPGCATATEAFTALEAGAQALKIF--PS--S--------AFG----PQYIKALKAVLPSDIAVFAV-----GGVT-- 158 (212)
T ss_dssp CEEECEECSHHHHHHHHHTTCSEEEET--TH--H--------HHC----HHHHHHHHTTSCTTCEEEEE-----SSCC--
T ss_pred CCEEeecCCHHHHHHHHHCCCCEEEEe--cC--C--------CCC----HHHHHHHHHhccCCCeEEEe-----CCCC--
Confidence 445788999999988889999998851 10 0 011 355566666665 999998 3221
Q ss_pred HHHHHHHHHhCccEEEeCCCC
Q 012815 168 KRTVKGYIKAGFAGIILEDQV 188 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~ 188 (456)
.++++++.++||+||.+=-..
T Consensus 159 ~~~i~~~~~~Ga~gv~vGsai 179 (212)
T 2v82_A 159 PENLAQWIDAGCAGAGLGSDL 179 (212)
T ss_dssp TTTHHHHHHHTCSEEEECTTT
T ss_pred HHHHHHHHHcCCCEEEEChHH
Confidence 245567778999999985443
No 321
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=90.81 E-value=2.8 Score=42.87 Aligned_cols=145 Identities=20% Similarity=0.207 Sum_probs=95.5
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI 182 (456)
+-++++|+|.|=++ .|| .+-....+.|++.+++||++|+-+=| +.+...+++|++.+
T Consensus 53 ~~l~~aG~diVRva----------vp~------~~~a~al~~I~~~~~vPlvaDiHf~~-------~lal~a~e~G~dkl 109 (366)
T 3noy_A 53 KRLYEAGCEIVRVA----------VPH------KEDVEALEEIVKKSPMPVIADIHFAP-------SYAFLSMEKGVHGI 109 (366)
T ss_dssp HHHHHTTCCEEEEE----------CCS------HHHHHHHHHHHHHCSSCEEEECCSCH-------HHHHHHHHTTCSEE
T ss_pred HHHHHcCCCEEEeC----------CCC------hHHHHHHHHHHhcCCCCEEEeCCCCH-------HHHHHHHHhCCCeE
Confidence 34667899988763 343 22256778888889999999976543 33344678999999
Q ss_pred EeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh------------cccHHHHHHHHHHhH
Q 012815 183 ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ------------ALSLEESLRRSRAFA 250 (456)
Q Consensus 183 ~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~------------~~~ldeAI~RakAy~ 250 (456)
-|.-+ +.+. -+|++..++++++.|....|-.-.-++. ...++.|++-++.+.
T Consensus 110 RINPG-------Nig~---------~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e 173 (366)
T 3noy_A 110 RINPG-------NIGK---------EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFE 173 (366)
T ss_dssp EECHH-------HHSC---------HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred EECCc-------ccCc---------hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99664 3321 2356666666665566666643333321 123688899999999
Q ss_pred hcCCCEEEeccCC-----CHHHHHHHHHhCCCCceeeeeecc
Q 012815 251 DAGADVLFIDALA-----SKEEMKAFCEISPLVPKMANMLEG 287 (456)
Q Consensus 251 eAGAD~Ifie~~~-----s~eei~~i~~~v~~vP~~~N~~~~ 287 (456)
+.|-+-|.+.... ..+..+.+++..+ .|+-+.+.+.
T Consensus 174 ~~gf~~iviS~K~S~v~~~i~ayr~la~~~d-yPLHlGvTEA 214 (366)
T 3noy_A 174 KWGFTNYKVSIKGSDVLQNVRANLIFAERTD-VPLHIGITEA 214 (366)
T ss_dssp HTTCCCEEEEEECSSHHHHHHHHHHHHHHCC-CCEEECCSSC
T ss_pred hCCCCeEEEeeecCChHHHHHHHHHHHhccC-CCEEEccCCC
Confidence 9998777765432 2445566777765 8988877775
No 322
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=90.80 E-value=1.3 Score=44.52 Aligned_cols=125 Identities=16% Similarity=0.206 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
|.|++......++++.+ .|...+||- .|. -+.++-+++|++++++. |+++.| |.|+.....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~------~~~~~d~~~v~avR~a~---g~~~~l--~vDaN~~~~ 205 (381)
T 3fcp_A 144 ASGDTAKDIAEGEKLLAEGRHRAFKLK-------IGA------RELATDLRHTRAIVEAL---GDRASI--RVDVNQAWD 205 (381)
T ss_dssp CSSCHHHHHHHHHHHTC----CEEEEE-------CCS------SCHHHHHHHHHHHHHHT---CTTCEE--EEECTTCBC
T ss_pred cCCChHHHHHHHHHHHHhCCCCEEEEe-------cCC------CChHHHHHHHHHHHHHc---CCCCeE--EEECCCCCC
Confidence 34566665555555554 699999983 222 13456688998888764 556655 568888888
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.|. .|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| ++.+..-.
T Consensus 206 ~~~A~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 206 AATGAKGCRELAAMGV--DLIEQPVSAHDNAALVRLSQQIE-TAILAD-----EA--VATAYDGYQLAQQGFTGAYALKI 275 (381)
T ss_dssp HHHHHHHHHHHHHTTC--SEEECCBCTTCHHHHHHHHHHSS-SEEEES-----TT--CCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCc--cceeCCCCcccHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHcCCCCEEEecc
Confidence 9999999999999864 577764 36788999999876 777653 11 234444 44445 66665544
Q ss_pred h
Q 012815 312 S 312 (456)
Q Consensus 312 ~ 312 (456)
.
T Consensus 276 ~ 276 (381)
T 3fcp_A 276 A 276 (381)
T ss_dssp H
T ss_pred c
Confidence 3
No 323
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=90.75 E-value=3.1 Score=41.40 Aligned_cols=150 Identities=14% Similarity=0.121 Sum_probs=84.1
Q ss_pred HHHHHHhCCcEEEec---chHHhhhhcccCCCCCCCHHHHHHHHHHHHhc-cCCcEEEeCCCCCCCHHHHHHHHHHHHHh
Q 012815 102 AKLVEKSGFSFCFTS---GFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKA 177 (456)
Q Consensus 102 Arl~e~aGfdAI~vS---G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra-~~iPVIaD~DtGYG~~~nv~rtVk~l~~A 177 (456)
++.+.++|++.|=++ ||..|.-..|.+ ..+-.| .++.+.+. .++|+.+=.--|++.. +-+++..++
T Consensus 36 ~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~---~~~~~e---~l~~i~~~~~~~~i~~l~~p~~~~~----~~i~~a~~a 105 (345)
T 1nvm_A 36 ARALDKAKVDSIEVAHGDGLQGSSFNYGFG---RHTDLE---YIEAVAGEISHAQIATLLLPGIGSV----HDLKNAYQA 105 (345)
T ss_dssp HHHHHHHTCSEEECSCTTSTTCCBTTTBCC---SSCHHH---HHHHHHTTCSSSEEEEEECBTTBCH----HHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCCCCCCcccCC---CCCHHH---HHHHHHhhCCCCEEEEEecCCcccH----HHHHHHHhC
Confidence 455677999999997 344331111221 122334 44555444 3577776422366654 456677789
Q ss_pred CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 178 GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 178 GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
|+++++|=+.. .+ .+++.+-++++++. |.++.... +|+. ....+..++-+++..++||+.|
T Consensus 106 Gvd~v~I~~~~-----s~--------~~~~~~~i~~ak~~----G~~v~~~~-~~a~-~~~~e~~~~ia~~~~~~Ga~~i 166 (345)
T 1nvm_A 106 GARVVRVATHC-----TE--------ADVSKQHIEYARNL----GMDTVGFL-MMSH-MIPAEKLAEQGKLMESYGATCI 166 (345)
T ss_dssp TCCEEEEEEET-----TC--------GGGGHHHHHHHHHH----TCEEEEEE-ESTT-SSCHHHHHHHHHHHHHHTCSEE
T ss_pred CcCEEEEEEec-----cH--------HHHHHHHHHHHHHC----CCEEEEEE-EeCC-CCCHHHHHHHHHHHHHCCCCEE
Confidence 99999995432 11 13333344444433 43333222 3442 3456788899999999999999
Q ss_pred Eecc---CCCHHHHHH----HHHhCC-CCce
Q 012815 258 FIDA---LASKEEMKA----FCEISP-LVPK 280 (456)
Q Consensus 258 fie~---~~s~eei~~----i~~~v~-~vP~ 280 (456)
.+.. ...++++.+ +.+.+| .+|+
T Consensus 167 ~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi 197 (345)
T 1nvm_A 167 YMADSGGAMSMNDIRDRMRAFKAVLKPETQV 197 (345)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHHHSCTTSEE
T ss_pred EECCCcCccCHHHHHHHHHHHHHhcCCCceE
Confidence 8874 334555544 445564 3443
No 324
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=90.71 E-value=4.4 Score=37.22 Aligned_cols=137 Identities=14% Similarity=0.103 Sum_probs=75.9
Q ss_pred HHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 142 GQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 142 ~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
++.+.+.. +.+++.|.=.+- .+..+. +.+.++||+.|.+--.. + .++ +++++++.++
T Consensus 47 i~~l~~~~p~~~v~lD~kl~d-ip~t~~---~~~~~~Gad~itvh~~~---------g------~~~---l~~~~~~~~~ 104 (216)
T 1q6o_A 47 VRDLKALYPHKIVLADAKIAD-AGKILS---RMCFEANADWVTVICCA---------D------INT---AKGALDVAKE 104 (216)
T ss_dssp HHHHHHHCTTSEEEEEEEECS-CHHHHH---HHHHHTTCSEEEEETTS---------C------HHH---HHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEEEecc-cHHHHH---HHHHhCCCCEEEEeccC---------C------HHH---HHHHHHHHHH
Confidence 45555544 578999987763 344443 36888999998762221 1 122 2233333333
Q ss_pred hCCCe--EEE-EecchhhcccHHHHHHHHHHhHhcCCCEEEe--------ccCC-CHHHHHHHHHhCC-CCceeeeeecc
Q 012815 221 SGSDI--VIV-ARTDSRQALSLEESLRRSRAFADAGADVLFI--------DALA-SKEEMKAFCEISP-LVPKMANMLEG 287 (456)
Q Consensus 221 ~G~df--vIi-ARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi--------e~~~-s~eei~~i~~~v~-~vP~~~N~~~~ 287 (456)
.|... .++ +.| .. +.+.+.+.|.+-+++ ++.. +.++++++.+..+ .+|+. + .
T Consensus 105 ~g~~~~~~ll~~~t-~~----------~~~~l~~~~~~~~vl~~a~~~~~~G~~g~~~~i~~lr~~~~~~~~i~--v--~ 169 (216)
T 1q6o_A 105 FNGDVQIELTGYWT-WE----------QAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVT--V--T 169 (216)
T ss_dssp TTCEEEEEECSCCC-HH----------HHHHHHHTTCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHHTTCEEE--E--E
T ss_pred cCCCceeeeeeCCC-hh----------hHHHHHhcCcHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCcEE--E--E
Confidence 34332 245 666 21 222233445554444 3333 4677777776553 23322 2 2
Q ss_pred CCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 288 GGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 288 ~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
||-.| -+.+++.+.|.+.+..|...+.+
T Consensus 170 GGI~~-~~~~~~~~aGad~ivvG~~I~~a 197 (216)
T 1q6o_A 170 GGLAL-EDLPLFKGIPIHVFIAGRSIRDA 197 (216)
T ss_dssp SSCCG-GGGGGGTTSCCSEEEESHHHHTS
T ss_pred CCcCh-hhHHHHHHcCCCEEEEeehhcCC
Confidence 34433 34688899999999999887764
No 325
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=90.58 E-value=0.54 Score=43.30 Aligned_cols=94 Identities=22% Similarity=0.235 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecch-HHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 77 PAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGF-SISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 77 ~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~-avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
..+.+++++. +.++...+++...++.+++.|+|.+.++.. ... ..|+....+ +..++.+++..++||++
T Consensus 100 ~~~~~~~~~~--~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~----~~~g~~~~~----~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 100 SPKQIRARFP--HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETD----CKKGLEGRG----VSLLSDIKQRISIPVIA 169 (221)
T ss_dssp CHHHHHHHCT--TCEEEEEECSHHHHHHHHHTTCSEEEEECCC--------------CH----HHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHHCC--CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccC----CCCCCCCCC----HHHHHHHHHhCCCCEEE
Confidence 3566777653 566677899999999999999999998752 111 122211122 34556666667899999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (456)
+. |- +++ +++++.++|++||-+=-.
T Consensus 170 ~G--GI-~~~----nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 170 IG--GM-TPD----RLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp ES--SC-CGG----GHHHHHHTTCSEEEESHH
T ss_pred EC--CC-CHH----HHHHHHHcCCCEEEEhHH
Confidence 82 22 444 445666799999988443
No 326
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=90.56 E-value=5.7 Score=39.03 Aligned_cols=196 Identities=15% Similarity=0.167 Sum_probs=108.4
Q ss_pred ceeecccCC-h-HHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHH
Q 012815 90 VHQGPACFD-A-LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNV 167 (456)
Q Consensus 90 ~lv~pgayD-a-lSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv 167 (456)
.++--|-|. . .....++.+|.+.+-++= --..++-++ .-++-++ ++ +++++- -+.|-.+.+++
T Consensus 15 l~~Gtgky~~~~~~~~ai~asg~eivtva~---rR~~~~~~~--~~~~~~~---i~------~~~~lp-ntaG~~taeeA 79 (268)
T 2htm_A 15 LILGSGKYEDFGVMREAIAAAKAEVVTVSV---RRVELKAPG--HVGLLEA---LE------GVRLLP-NTAGARTAEEA 79 (268)
T ss_dssp EEEECSSCSCHHHHHHHHHHTTCSEEEEEE---EECC---------CHHHH---TT------TSEEEE-BCTTCCSHHHH
T ss_pred eEEecCCCCCHHHHHHHHHHhCCCEEEEEc---cccCCCCCC--cccHHHH---Hh------hhhccC-cccCCCCHHHH
Confidence 344445552 2 455667788999988871 100111112 2233333 32 333321 33455566666
Q ss_pred HHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec-chhhcccHHHHHHH
Q 012815 168 KRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART-DSRQALSLEESLRR 245 (456)
Q Consensus 168 ~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART-DA~~~~~ldeAI~R 245 (456)
.++.+...+ .|-.=|+||--. +.+-+.| +..+-|+|+..-.+ .+|.++--+ |. +.-
T Consensus 80 v~~a~lare~~gt~~iKlEvi~--------d~~~l~p--D~~~tv~aa~~L~k---~Gf~Vlpy~~~D---------~~~ 137 (268)
T 2htm_A 80 VRLARLGRLLTGERWVKLEVIP--------DPTYLLP--DPLETLKAAERLIE---EDFLVLPYMGPD---------LVL 137 (268)
T ss_dssp HHHHHHHHHHHCCSEEBCCCCS--------CTTTTCC--CHHHHHHHHHHHHH---TTCEECCEECSC---------HHH
T ss_pred HHHHHhhhHhcCcceeeeeecc--------CccccCc--CHHHHHHHHHHHHH---CCCEEeeccCCC---------HHH
Confidence 666544332 577778887642 1122222 23556666666555 367777433 33 245
Q ss_pred HHHhHhcCCCEEEecc--------CCCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH-
Q 012815 246 SRAFADAGADVLFIDA--------LASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG- 315 (456)
Q Consensus 246 akAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~- 315 (456)
|++.+++|+++|+..+ +.+.+.++.+.+..+. +|+++ +++=.+| -......+||+.-|..+.....
T Consensus 138 ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~---~GGI~tp-sDAa~AmeLGAdgVlVgSAI~~a 213 (268)
T 2htm_A 138 AKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV---DAGLGLP-SHAAEVMELGLDAVLVNTAIAEA 213 (268)
T ss_dssp HHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE---ESCCCSH-HHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE---eCCCCCH-HHHHHHHHcCCCEEEEChHHhCC
Confidence 7788889999998743 3577788888884444 67653 4422222 2346788999999999987665
Q ss_pred ----HHHHHHHHHHH
Q 012815 316 ----VSVRAMQDALT 326 (456)
Q Consensus 316 ----aa~~A~~~~l~ 326 (456)
...+++.++++
T Consensus 214 ~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 214 QDPPAMAEAFRLAVE 228 (268)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 23455555543
No 327
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=90.55 E-value=4.2 Score=40.89 Aligned_cols=166 Identities=22% Similarity=0.194 Sum_probs=102.3
Q ss_pred eecccCChHHHHHH------HHhCCcEEEecchHHhhhhcccCC-CCCCCHH---HHHHHHHHHHhcc-CCcEEEeC---
Q 012815 92 QGPACFDALSAKLV------EKSGFSFCFTSGFSISAARLALPD-TGFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (456)
Q Consensus 92 v~pgayDalSArl~------e~aGfdAI~vSG~avSas~lG~PD-~~~lt~~---Eml~~~r~I~ra~-~iPVIaD~--- 157 (456)
.|||+|-..--++. .++|.++|.+=|.. . . -| .+.-.++ =+...++.|.+.+ ++-|+.|.
T Consensus 54 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp-~---~--Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vitDvcLc 127 (328)
T 1w1z_A 54 SMPGSFRFTIDRAVEECKELYDLGIQGIDLFGIP-E---Q--KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALD 127 (328)
T ss_dssp TEEEEEEEEHHHHHHHHHHHHHHTCCEEEEEECC-S---S--CCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEEEEECST
T ss_pred CCCCeeEeCHHHHHHHHHHHHHCCCCEEEEECCC-C---C--CCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecc
Confidence 56777643333333 34699988875431 0 1 11 1111121 2455677777766 47788884
Q ss_pred ---CCCC------C---CHHHHHHHH---HHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 158 ---DNGY------G---NAMNVKRTV---KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 158 ---DtGY------G---~~~nv~rtV---k~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
++|+ | |...+...+ -...+|||+-|-=-|- ++| ||.|++++-++.|
T Consensus 128 ~YT~HGHcGil~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~~G 188 (328)
T 1w1z_A 128 PFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAGADFVSPSDM--------MDG-----------RIGAIREALDETD 188 (328)
T ss_dssp TTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHHTT
T ss_pred cCCCCCceeeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHhCC
Confidence 2332 2 233344444 4456899998876663 444 5555555555444
Q ss_pred -CCeEEEEecchhh------------c--------------ccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHHHHh
Q 012815 223 -SDIVIVARTDSRQ------------A--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAFCEI 274 (456)
Q Consensus 223 -~dfvIiARTDA~~------------~--------------~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i~~~ 274 (456)
.+.-|.+-+--++ . ..-+||++.+..=.+-|||+|+| |+++-.+.++++.+.
T Consensus 189 ~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~YLDIir~vk~~ 268 (328)
T 1w1z_A 189 HSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKER 268 (328)
T ss_dssp CTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEESCGGGHHHHHHHHHH
T ss_pred CCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEEEcCCCchHHHHHHHHHh
Confidence 3677777653221 0 12589999999999999999999 789999999999998
Q ss_pred CCCCceeee
Q 012815 275 SPLVPKMAN 283 (456)
Q Consensus 275 v~~vP~~~N 283 (456)
+. +|+.+=
T Consensus 269 ~~-~P~aaY 276 (328)
T 1w1z_A 269 FD-VPVAIY 276 (328)
T ss_dssp HC-SCEEEE
T ss_pred cC-CCEEEE
Confidence 86 787543
No 328
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=90.52 E-value=2.2 Score=43.76 Aligned_cols=148 Identities=15% Similarity=0.112 Sum_probs=91.4
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCC-------CCCccCCCCccccC----HHHHHHHHHHHHHHh
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVS-------PKGCGHTRGRKVVS----REEAVMRIKAAVDAR 218 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~-------pK~CGH~~gk~lvp----~ee~v~kI~AA~~Ar 218 (456)
.+|+-+-. +..+++.+.+.++++.+.|...++|-=+.. |..-++..+. ..+ .++.+++|++++++.
T Consensus 143 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~e~v~avR~av 219 (422)
T 3tji_A 143 AIPAYSHA--SGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGA-WFDQQEYMSNTVEMFHALREKY 219 (422)
T ss_dssp CEEEEEEE--EESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSE-ECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEe--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccc-cccchhHHHHHHHHHHHHHHHc
Confidence 36654421 234678889999999999999999842211 0001122221 122 345577777776664
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-C--CHHHHHHHHHhCCCCceeeeeeccCCCCCCCC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-A--SKEEMKAFCEISPLVPKMANMLEGGGKTPILN 295 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~--s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt 295 (456)
|+++-|.. |+......++|++.++++.+.|.+ |+|-+ + +.+.++++.+.++ +|+.++ |. ....-.
T Consensus 220 ---G~d~~L~v--DaN~~~~~~~A~~~~~~Le~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d--E~--~~~~~~ 287 (422)
T 3tji_A 220 ---GWKLHILH--DVHERLFPQQAVQLAKQLEPFQPY--FIEDILPPQQSAWLEQVRQQSC-VPLALG--EL--FNNPAE 287 (422)
T ss_dssp ---CSSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCS--EEECCSCGGGGGGHHHHHHHCC-CCEEEC--TT--CCSGGG
T ss_pred ---CCCCEEEE--ECCCCCCHHHHHHHHHHHHhhCCC--eEECCCChhhHHHHHHHHhhCC-CCEEEe--CC--cCCHHH
Confidence 67776654 676777899999999999998755 56653 2 4567888888876 787653 11 111123
Q ss_pred HHHHHhcC-CCEEeccch
Q 012815 296 PLELEELG-FKLVAYPLS 312 (456)
Q Consensus 296 ~~eL~elG-v~~Vs~p~~ 312 (456)
.+++-+.| +..|..-..
T Consensus 288 ~~~ll~~ga~d~v~~k~~ 305 (422)
T 3tji_A 288 WHDLIVNRRIDFIRCHVS 305 (422)
T ss_dssp THHHHHTTCCSEECCCGG
T ss_pred HHHHHhcCCCCEEecCcc
Confidence 45566666 666655444
No 329
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=90.49 E-value=1.1 Score=47.56 Aligned_cols=92 Identities=15% Similarity=0.051 Sum_probs=56.6
Q ss_pred HHHHHh-CCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh----ccCCcEEE
Q 012815 81 LRQILE-LPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ----AVSIPVIG 155 (456)
Q Consensus 81 Lr~ll~-~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r----a~~iPVIa 155 (456)
++++.+ .+.++++-++-+.-.|+.++++|+++|.+|+.+-. ..|...-++ +++..+....+ ..++|||+
T Consensus 335 i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~-----~~d~~~~~~-~~l~~v~~~v~~~~~~~~ipVia 408 (511)
T 1kbi_A 335 IEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGR-----QLDFSRAPI-EVLAETMPILEQRNLKDKLEVFV 408 (511)
T ss_dssp HHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTT-----SSTTCCCHH-HHHHHHHHHHHTTTCBTTBEEEE
T ss_pred HHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCc-----cCCCCCchH-HHHHHHHHHHHhhccCCCcEEEE
Confidence 444433 25677777777888899999999999999865411 124433333 33333333222 12699999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
|. |.-+...+. +++.+||++|.|
T Consensus 409 ~G--GI~~g~Dv~----kaLalGAdaV~i 431 (511)
T 1kbi_A 409 DG--GVRRGTDVL----KALCLGAKGVGL 431 (511)
T ss_dssp ES--SCCSHHHHH----HHHHHTCSEEEE
T ss_pred EC--CCCCHHHHH----HHHHcCCCEEEE
Confidence 83 333444444 333489999998
No 330
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=90.44 E-value=11 Score=40.16 Aligned_cols=154 Identities=16% Similarity=0.131 Sum_probs=86.7
Q ss_pred CCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHH
Q 012815 128 PDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (456)
Q Consensus 128 PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~ 207 (456)
+|...-.+.++...++.+++..++|+|++- . +....+.|++|||+.... .|..+
T Consensus 47 K~~~~~~~~~~a~~l~~l~~~~~v~liIND-----~-------~dlA~~~gAdGVHLgq~d-------------l~~~~- 100 (540)
T 3nl6_A 47 KDADTKFFIEEALQIKELCHAHNVPLIIND-----R-------IDVAMAIGADGIHVGQDD-------------MPIPM- 100 (540)
T ss_dssp SSSCTTHHHHHHHHHHHHHHHTTCCEEECS-----C-------SHHHHHTTCSEEEECTTS-------------SCHHH-
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCEEEEeC-----c-------HHHHHHcCCCEEEEChhh-------------cCHHH-
Confidence 343333455666777788888899999962 1 123456899999996542 12221
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC---CCEEEeccC-C------------CHHHHHHH
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG---ADVLFIDAL-A------------SKEEMKAF 271 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAG---AD~Ifie~~-~------------s~eei~~i 271 (456)
+|+.++++.+ ++.+-. ..+| ++...+.| ||.|.+-.+ + ..+.++++
T Consensus 101 ---------ar~~lg~~~i-iG~S~h----t~ee----a~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i 162 (540)
T 3nl6_A 101 ---------IRKLVGPDMV-IGWSVG----FPEE----VDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRV 162 (540)
T ss_dssp ---------HHHHHCTTSE-EEEEEC----SHHH----HHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHH
T ss_pred ---------HHHHhCCCCE-EEEECC----CHHH----HHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 1222355544 444432 2344 34455789 999988322 1 14555666
Q ss_pred HHhC-----CCCceeeeeeccCCCCCCCCHHHHHh--------cCCCEEeccchHHHH--HHHHHHHHHHHHHc
Q 012815 272 CEIS-----PLVPKMANMLEGGGKTPILNPLELEE--------LGFKLVAYPLSLIGV--SVRAMQDALTAIKG 330 (456)
Q Consensus 272 ~~~v-----~~vP~~~N~~~~~g~tp~lt~~eL~e--------lGv~~Vs~p~~ll~a--a~~A~~~~l~~i~~ 330 (456)
.+.+ ..+|+. . .||-++ -+..++.+ .|+..|.....++.+ ...+.+...+.+.+
T Consensus 163 ~~~~~~~~~~~iPvv--A--IGGI~~-~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 163 LDALERNNAHWCRTV--G--IGGLHP-DNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp HHHHHHTTCTTCEEE--E--ESSCCT-TTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred HHHHHhhccCCCCEE--E--EcCCCH-HHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 6543 225543 2 245443 45778776 789888887776642 23334444444444
No 331
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=90.41 E-value=0.94 Score=45.09 Aligned_cols=119 Identities=17% Similarity=0.239 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 162 GNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 162 G~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
++++...+.++++.++|..+++|-- | | ++.+++|++++++. |+++.+ |.|+.....+++
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~-------~--------~-~~~~e~v~avr~~~---g~~~~l--~vDan~~~~~~~ 198 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKI-------E--------P-GWDVEPVRAVRERF---GDDVLL--QVDANTAYTLGD 198 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEEC-------B--------T-TBSHHHHHHHHHHH---CTTSEE--EEECTTCCCGGG
T ss_pred CCHHHHHHHHHHHHHhCccEEEEec-------C--------c-hhHHHHHHHHHHhc---CCCceE--EEeccCCCCHHH
Confidence 4677788888999999999999821 1 0 22356777777664 567665 568877777889
Q ss_pred HHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccch
Q 012815 242 SLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLS 312 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~~ 312 (456)
++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+... +. ..+.++ +-+.| ++.|..-+.
T Consensus 199 -~~~~~~l~~~~i~--~iE~P~~~~~~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~i~~~~~d~v~ik~~ 265 (368)
T 1sjd_A 199 -APQLARLDPFGLL--LIEQPLEEEDVLGHAELARRIQ-TPICLD-----ES--IVSARAAADAIKLGAVQIVNIKPG 265 (368)
T ss_dssp -HHHHHTTGGGCCS--EEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECTT
T ss_pred -HHHHHHHHhcCCC--eEeCCCChhhHHHHHHHHHhCC-CCEEEC-----CC--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999877 56653 36678888888776 776543 21 234444 44445 677766443
No 332
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=90.31 E-value=2 Score=42.18 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~ 157 (456)
.+.++.+++. +..+++.+.+.-.|+.++++|.|++.+.|..- -|+......+ .+..++.+.+.+++||+++.
T Consensus 108 ~~~~~~l~~~-gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~----GG~~G~~~~~---~~~~l~~v~~~~~iPviaaG 179 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHKCTAVRHALKAERLGVDAVSIDGFEC----AGHPGEDDIP---GLVLLPAAANRLRVPIIASG 179 (328)
T ss_dssp HHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEEECTTC----SBCCCSSCCC---HHHHHHHHHTTCCSCEEEES
T ss_pred HHHHHHHHHc-CCCEEeeCCCHHHHHHHHHcCCCEEEEECCCC----CcCCCCcccc---HHHHHHHHHHhcCCCEEEEC
Confidence 3444554444 45566788899999999999999999975431 1221111111 22455677777899999983
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
|..+..++. ++.++||+||.+=
T Consensus 180 --GI~~~~~v~----~al~~GAdgV~vG 201 (328)
T 2gjl_A 180 --GFADGRGLV----AALALGADAINMG 201 (328)
T ss_dssp --SCCSHHHHH----HHHHHTCSEEEES
T ss_pred --CCCCHHHHH----HHHHcCCCEEEEC
Confidence 444555554 4445799999984
No 333
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=90.31 E-value=5.3 Score=40.43 Aligned_cols=147 Identities=16% Similarity=0.093 Sum_probs=87.5
Q ss_pred HHHHHHHHhCCcEEEecc---hHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCCC-----CC-
Q 012815 100 LSAKLVEKSGFSFCFTSG---FSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDN-----GY- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vSG---~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~Dt-----GY- 161 (456)
-.|+.+.++|||+|=+-+ |-+.-. ..-.-|.--=+++. +++.+++|+++++ -||.+-+-- |.
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 467888899999998863 333211 11223321124543 2444556666653 288876542 22
Q ss_pred -CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 162 -GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 162 -G~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
++. ++..+.++.++++|++.|++-... .+. +++++|+.++ +..++.+++.+
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--------~~~------~~~~~ik~~~------~iPvi~~Ggit------- 289 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRERE--------ADD------SIGPLIKEAF------GGPYIVNERFD------- 289 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECCC--------CTT------CCHHHHHHHH------CSCEEEESSCC-------
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECCCC--------CCH------HHHHHHHHHC------CCCEEEeCCCC-------
Confidence 233 467888999999999999985542 111 2455554433 24566666652
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.+..+.+.| ||+|.+-- +.+++..+++.+..+
T Consensus 290 ---~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g~~ 326 (362)
T 4ab4_A 290 ---KASANAALASGKADAVAFGVPFIANPDLPARLAADAP 326 (362)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCC
T ss_pred ---HHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHcCCC
Confidence 24456666677 99998843 455567788877654
No 334
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.31 E-value=2.1 Score=41.89 Aligned_cols=142 Identities=15% Similarity=0.086 Sum_probs=84.2
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 152 PVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
=.++++|.|......-...++..++.||+-|-+==.. |.. .| ..+.+.+-|++.+++.. +..+.+|-=
T Consensus 98 ~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNi-----g~lk~g----~~~~v~~eI~~v~~a~~--~~~lKVIlE 166 (260)
T 3r12_A 98 VTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINV-----GMLKAK----EWEYVYEDIRSVVESVK--GKVVKVIIE 166 (260)
T ss_dssp EEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHTT--TSEEEEECC
T ss_pred EEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeeh-----hhhccc----cHHHHHHHHHHHHHhcC--CCcEEEEEe
Confidence 3456888887666544555678888999988552111 110 11 23567778888888864 234555544
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCCEEEe-----ccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCC
Q 012815 231 TDSRQALSLEESLRRSRAFADAGADVLFI-----DALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFK 305 (456)
Q Consensus 231 TDA~~~~~ldeAI~RakAy~eAGAD~Ifi-----e~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~ 305 (456)
|..+ .-++.+.-++...+||||.|=- .+-.+.+.++-+.+.+. -++.+- ..||-...-+..++-++|..
T Consensus 167 t~~L---t~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg-~~v~VK--aAGGIrt~~~al~mi~aGA~ 240 (260)
T 3r12_A 167 TCYL---DTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVG-DEMGVK--ASGGIRTFEDAVKMIMYGAD 240 (260)
T ss_dssp GGGC---CHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHC-TTSEEE--EESSCCSHHHHHHHHHTTCS
T ss_pred CCCC---CHHHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhC-CCceEE--EeCCCCCHHHHHHHHHcCCc
Confidence 5332 2356566678888999999944 33345667776666554 233322 22332211235667889999
Q ss_pred EEecc
Q 012815 306 LVAYP 310 (456)
Q Consensus 306 ~Vs~p 310 (456)
|+-..
T Consensus 241 RiGtS 245 (260)
T 3r12_A 241 RIGTS 245 (260)
T ss_dssp EEEES
T ss_pred eeecc
Confidence 87543
No 335
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=90.23 E-value=17 Score=36.82 Aligned_cols=222 Identities=11% Similarity=-0.001 Sum_probs=132.8
Q ss_pred HHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCC--CCHHHHHHHHHHHHhccCCcE
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGF--ISYGEMVDQGQLITQAVSIPV 153 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~--lt~~Eml~~~r~I~ra~~iPV 153 (456)
-|....+.+--+.+.|+++.-+++.+ ++.+.+.|.-.|-+... ..|...... .....+...++.+++..++||
T Consensus 12 ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~-y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPV 90 (349)
T 3elf_A 12 MLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAE-FGSGLGVKDMVTGAVALAEFTHVIAAKYPVNV 90 (349)
T ss_dssp HHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHHH-HHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCE
T ss_pred HHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHh-hcCcchhhhhhhhHHHHHHHHHHHHHHCCCCE
Confidence 34444455556888999998888765 56688888755433221 222211111 123566778888888889999
Q ss_pred EEeCCCCCCCH---------HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCC
Q 012815 154 IGDGDNGYGNA---------MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSD 224 (456)
Q Consensus 154 IaD~DtGYG~~---------~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~d 224 (456)
..=.|.|.... +...+.++.-+++|...|.| |.. | .|.||=++.-+..++-++..|
T Consensus 91 aLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMi-DgS------~------lp~eENi~~Tk~vv~~ah~~g-- 155 (349)
T 3elf_A 91 ALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMW-DGS------A------VPIDENLAIAQELLKAAAAAK-- 155 (349)
T ss_dssp EEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEE-CCT------T------SCHHHHHHHHHHHHHHHHHTT--
T ss_pred EEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEe-cCC------C------CCHHHHHHHHHHHHHHHHHcC--
Confidence 99999995311 12345555555668999999 442 2 377888888887777665432
Q ss_pred eEEE------Eec-chh-------hcccHHHHHHHHHHhH-hcC-----CCEEEe-----ccCC-------CHHHHHHHH
Q 012815 225 IVIV------ART-DSR-------QALSLEESLRRSRAFA-DAG-----ADVLFI-----DALA-------SKEEMKAFC 272 (456)
Q Consensus 225 fvIi------ART-DA~-------~~~~ldeAI~RakAy~-eAG-----AD~Ifi-----e~~~-------s~eei~~i~ 272 (456)
.-|= +-. |.. .-..-+| |+.|. +.| .|++=+ +|+- +.+.++++.
T Consensus 156 vsVEaElG~iGG~Edgv~~~~~~~~yT~Pee----a~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~ 231 (349)
T 3elf_A 156 IILEIEIGVVGGEEDGVANEINEKLYTSPED----FEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQ 231 (349)
T ss_dssp CEEEEEESCCBC-------------CCCHHH----HHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHH
T ss_pred CeEEEEeeccccccCCcccccccccCCCHHH----HHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHH
Confidence 1111 111 100 0012334 44443 456 898754 2321 355666666
Q ss_pred HhC----C------CCceeeeeeccCCCCCCCCHHHH---HhcCCCEEeccchHHHHHHHHHHHHHHH
Q 012815 273 EIS----P------LVPKMANMLEGGGKTPILNPLEL---EELGFKLVAYPLSLIGVSVRAMQDALTA 327 (456)
Q Consensus 273 ~~v----~------~vP~~~N~~~~~g~tp~lt~~eL---~elGv~~Vs~p~~ll~aa~~A~~~~l~~ 327 (456)
+.+ + .+|+ +++++. .++.+++ -+.|+.-|=+..-+..+.+.++++.+.+
T Consensus 232 ~~v~~~~~~~~~~~~vpL---VlHGgS---G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~ 293 (349)
T 3elf_A 232 QVAAAKLGLPADAKPFDF---VFHGGS---GSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFT 293 (349)
T ss_dssp HHHHHHHTCCTTCCCCCE---EECCCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccccCCCcE---EEeCCC---CCCHHHHHHHHHcCCEEEEcchHHHHHHHHHHHHHHHh
Confidence 543 1 2444 245432 3555554 4689999999999999999999998764
No 336
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=90.17 E-value=1.3 Score=46.40 Aligned_cols=88 Identities=18% Similarity=0.113 Sum_probs=54.8
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEec-chH-HhhhhcccCCCCCCCHHHHHHHHHHHHhcc------CCcEEEeCCCC
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTS-GFS-ISAARLALPDTGFISYGEMVDQGQLITQAV------SIPVIGDGDNG 160 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vS-G~a-vSas~lG~PD~~~lt~~Eml~~~r~I~ra~------~iPVIaD~DtG 160 (456)
-++++-++.++-.|+.+.++|++++-++ +.+ +... .-..+.+ ++.-+.+..+...++.. ++|||+|. |
T Consensus 285 ~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~-r~~~~~g-~p~~~~l~~v~~~~~~~~~~~~~~ipvia~G--G 360 (503)
T 1me8_A 285 VKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICIT-REQKGIG-RGQATAVIDVVAERNKYFEETGIYIPVCSDG--G 360 (503)
T ss_dssp SCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCS-TTTTCCC-CCHHHHHHHHHHHHHHHHHHHSEECCEEEES--C
T ss_pred ceEeeccccCHHHHHHHHHhCCCeEEecccCCcCccc-ccccCCC-CchHHHHHHHHHHHHHHhhhcCCCceEEEeC--C
Confidence 4677789999999999999999999985 111 1101 0011111 33333334444444433 69999996 5
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEe
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
..++.++. +...+||++|.+
T Consensus 361 i~~~~di~----kAlalGA~~V~i 380 (503)
T 1me8_A 361 IVYDYHMT----LALAMGADFIML 380 (503)
T ss_dssp CCSHHHHH----HHHHTTCSEEEE
T ss_pred CCCHHHHH----HHHHcCCCEEEE
Confidence 55555555 344689999998
No 337
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=90.12 E-value=3.6 Score=41.45 Aligned_cols=153 Identities=10% Similarity=0.061 Sum_probs=86.4
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEE-----eCCCCC-
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIG-----DGDNGY- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIa-----D~DtGY- 161 (456)
-.|+.+.++|||+|=+- |+-+.-. ..-..|.--=+++. +++.+++|+++++ -||.+ |.-.|.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~ 244 (364)
T 1vyr_A 165 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD 244 (364)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccccc
Confidence 36777888999999985 2322110 00112321123432 3445666767663 38988 421221
Q ss_pred --C-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 162 --G-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 162 --G-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
+ +.++..+.++.++++|++.|++-..... +. +-.+. +++++|+.+ .+..++.+++-+
T Consensus 245 ~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~---~~----~~~~~-~~~~~v~~~------~~iPvi~~Ggit------ 304 (364)
T 1vyr_A 245 NGPNEEADALYLIEELAKRGIAYLHMSETDLA---GG----KPYSE-AFRQKVRER------FHGVIIGAGAYT------ 304 (364)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT---BC----CCCCH-HHHHHHHHH------CCSEEEEESSCC------
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEecCccc---CC----CcccH-HHHHHHHHH------CCCCEEEECCcC------
Confidence 2 2356788899999999999999654310 00 11232 344444332 233455555541
Q ss_pred HHHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 239 LEESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 239 ldeAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.++.+.+.| ||+|.+-- +.+++..+++.+..+
T Consensus 305 ----~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~ 341 (364)
T 1vyr_A 305 ----AEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAE 341 (364)
T ss_dssp ----HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ----HHHHHHHHHCCCccEEEECHHHHhChhHHHHHHcCCC
Confidence 25566677787 99998843 445567777776543
No 338
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=90.11 E-value=2 Score=44.54 Aligned_cols=127 Identities=18% Similarity=0.234 Sum_probs=70.5
Q ss_pred HHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012815 100 LSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (456)
Q Consensus 100 lSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AG 178 (456)
-.+..+.++|++++.+... .|++ ...++.++.+++.+ ++||++ |.+.. .+.++.++++|
T Consensus 240 ~~a~~l~~aGvd~v~i~~~------~G~~-------~~~~e~i~~i~~~~p~~pvi~----g~~~t---~e~a~~l~~~G 299 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTA------HGHS-------RRVIETLEMIKADYPDLPVVA----GNVAT---PEGTEALIKAG 299 (494)
T ss_dssp HHHHHHHHTTCSEEEECCS------CCSS-------HHHHHHHHHHHHHCTTSCEEE----EEECS---HHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEEEec------CCch-------HHHHHHHHHHHHHCCCceEEe----CCcCC---HHHHHHHHHcC
Confidence 4566677889999998641 3533 45667788888887 699988 32322 22337788999
Q ss_pred ccEEEeCCCCCCCCccCC--CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 179 FAGIILEDQVSPKGCGHT--RGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 179 aaGI~IEDq~~pK~CGH~--~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
+++|.+-.... -.|+.. .+ .-.|.-+.+..+..++ .. .++-|+|=---... ..+.++.++|||+
T Consensus 300 ~d~I~v~~~~G-~~~~~~~~~~-~g~p~~~~l~~v~~~~---~~--~~ipvia~GGI~~~-------~di~kala~GAd~ 365 (494)
T 1vrd_A 300 ADAVKVGVGPG-SICTTRVVAG-VGVPQLTAVMECSEVA---RK--YDVPIIADGGIRYS-------GDIVKALAAGAES 365 (494)
T ss_dssp CSEEEECSSCS-TTCHHHHHHC-CCCCHHHHHHHHHHHH---HT--TTCCEEEESCCCSH-------HHHHHHHHTTCSE
T ss_pred CCEEEEcCCCC-ccccccccCC-CCccHHHHHHHHHHHH---hh--cCCCEEEECCcCCH-------HHHHHHHHcCCCE
Confidence 99999932211 011100 00 0135544544444333 22 23445552211111 2344455689999
Q ss_pred EEec
Q 012815 257 LFID 260 (456)
Q Consensus 257 Ifie 260 (456)
|.+-
T Consensus 366 V~iG 369 (494)
T 1vrd_A 366 VMVG 369 (494)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9974
No 339
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.10 E-value=4.9 Score=39.43 Aligned_cols=170 Identities=15% Similarity=0.123 Sum_probs=92.6
Q ss_pred cccCCCccccccccH---HHHHHHHHh--CCCceeecccCCh------HHHHHHHHhCCcEEEecchHHhhhhcccCCCC
Q 012815 63 VYRKNSTGVEACLSP---AKSLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALPDTG 131 (456)
Q Consensus 63 ~y~~~s~~~~~a~~~---a~~Lr~ll~--~~~~lv~pgayDa------lSArl~e~aGfdAI~vSG~avSas~lG~PD~~ 131 (456)
.+.-||....+..+. .+-++...+ .++..++.|+-.. --|+.++++|+|++.+..- -..
T Consensus 50 l~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P----------~y~ 119 (306)
T 1o5k_A 50 LIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP----------YYN 119 (306)
T ss_dssp EEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC----------CSS
T ss_pred EEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC----------CCC
Confidence 455577666653322 222333222 3444344454432 2356677889999987631 111
Q ss_pred CCCHHHHHHHHHHHHhccCCcEEE-eCCC--CCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHH
Q 012815 132 FISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (456)
Q Consensus 132 ~lt~~Eml~~~r~I~ra~~iPVIa-D~Dt--GYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~ 207 (456)
..+-+++.++-++|++++++||+. +.+. |+- .++.+.+.+++ --.+.|||-... .
T Consensus 120 ~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--~pnIvgiKdssg-------d------------ 178 (306)
T 1o5k_A 120 KPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAAD--LKNVVGIXEANP-------D------------ 178 (306)
T ss_dssp CCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHH--CTTEEEEEECCC-------C------------
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHh--CCCEEEEeCCCC-------C------------
Confidence 237799999999999999999875 7773 543 34445544422 246888886432 1
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHh
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEI 274 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~ 274 (456)
..++...++.....+++|.|..=.|... ..+..+||+..+--. ---++++.++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~f~v~~G~d~~~-----------l~~l~~G~~G~is~~an~~P~~~~~l~~a 235 (306)
T 1o5k_A 179 IDQIDRTVSLTKQARSDFMVWSGNDDRT-----------FYLLCAGGDGVISVVSNVAPKQMVELCAE 235 (306)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEESSGGGH-----------HHHHHHTCCEEEESGGGTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEECcHHHH-----------HHHHHCCCCEEEecHHHhhHHHHHHHHHH
Confidence 1223323322221123787766555542 223457999876532 1234555555544
No 340
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=90.08 E-value=0.47 Score=48.22 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=59.4
Q ss_pred HHHHHHHh-CCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC
Q 012815 79 KSLRQILE-LPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (456)
Q Consensus 79 ~~Lr~ll~-~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~ 157 (456)
+.++++.+ -+.++++.++...-.|+.++++|+|+|.+|+.+-. .-|.+..++ +.+..+.+.++.|||+|.
T Consensus 215 ~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~-----~~d~~~~~~----~~l~~v~~~~~~pVia~G 285 (380)
T 1p4c_A 215 EALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGR-----QLDCAISPM----EVLAQSVAKTGKPVLIDS 285 (380)
T ss_dssp HHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGT-----SCTTCCCGG----GTHHHHHHHHCSCEEECS
T ss_pred HHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCC-----cCCCCcCHH----HHHHHHHHHcCCeEEEEC
Confidence 34444443 24678888999999999999999999999864421 123333332 233455566677999984
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
. ..+..++. ++..+||++|.|
T Consensus 286 G--I~~~~dv~----kal~~GAdaV~i 306 (380)
T 1p4c_A 286 G--FRRGSDIV----KALALGAEAVLL 306 (380)
T ss_dssp S--CCSHHHHH----HHHHTTCSCEEE
T ss_pred C--CCCHHHHH----HHHHhCCcHhhe
Confidence 3 33444444 444589999988
No 341
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=90.06 E-value=1.1 Score=48.11 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=60.0
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNV 167 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv 167 (456)
-++++-|+-++-.|+.+.++|+|+|-++ |-+-.++..-.--.+ ++.-.-+..+...++..++|||+|.---| +-++
T Consensus 323 ~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG-~PQ~tAi~~~a~~a~~~~vpvIADGGI~~--sGDi 399 (556)
T 4af0_A 323 IDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVG-RPQGTAVYAVAEFASRFGIPCIADGGIGN--IGHI 399 (556)
T ss_dssp SEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSC-CCHHHHHHHHHHHHGGGTCCEEEESCCCS--HHHH
T ss_pred ceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCC-CcHHHHHHHHHHHHHHcCCCEEecCCcCc--chHH
Confidence 4678889999999999999999999998 333221211111112 34444455566777888999999954443 2233
Q ss_pred HHHHHHHHHhCccEEEeCC
Q 012815 168 KRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IED 186 (456)
. +.+.+||+.|.|-.
T Consensus 400 ~----KAlaaGAd~VMlGs 414 (556)
T 4af0_A 400 A----KALALGASAVMMGG 414 (556)
T ss_dssp H----HHHHTTCSEEEEST
T ss_pred H----HHhhcCCCEEEEch
Confidence 3 34458999999943
No 342
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=90.05 E-value=1.2 Score=44.39 Aligned_cols=62 Identities=13% Similarity=0.162 Sum_probs=43.5
Q ss_pred HHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccc
Q 012815 245 RSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPL 311 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~ 311 (456)
.++...+||||.|.++.+. .+++++.++.+.+ ...+- ..||-++ -+..++++.||..++.|.
T Consensus 219 e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~-~v~le--aSGGIt~-~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMS-ISEIKKAVDIVNG-KSVLE--VSGCVNI-RNVRNIALTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT-SSEEE--EESSCCT-TTHHHHHTTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC-ceEEE--EECCCCH-HHHHHHHHcCCCEEEeCc
Confidence 3444566899999999865 4789988887653 11221 2234433 578999999999999875
No 343
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=90.01 E-value=5.5 Score=37.29 Aligned_cols=127 Identities=22% Similarity=0.199 Sum_probs=75.8
Q ss_pred HHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC--CCCCCCHHHHHHHHHHHHH
Q 012815 100 LSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG--DNGYGNAMNVKRTVKGYIK 176 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~--DtGYG~~~nv~rtVk~l~~ 176 (456)
..++.+.+.|++.|=+- -.+. ...| ..+++...+++|+++++ |+++=. ++++-+.+++.+.++..++
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~--~~~~-------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~e 143 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA--FKSE-------KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIE 143 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH--HHTT-------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecHHH--HhcC-------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44566778899998742 2221 1112 23567777888888886 766533 5665566788999999999
Q ss_pred hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 177 AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
+||++|+.--+. ..+|. +. +.+..++.++ +.++-|+|--+-.. .+.+.++.++|||.
T Consensus 144 aGad~I~tstg~------~~gga---~~-~~i~~v~~~v------~~~ipVia~GGI~t-------~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 144 AGADFIKTSTGF------APRGT---TL-EEVRLIKSSA------KGRIKVKASGGIRD-------LETAISMIEAGADR 200 (225)
T ss_dssp HTCSEEECCCSC------SSSCC---CH-HHHHHHHHHH------TTSSEEEEESSCCS-------HHHHHHHHHTTCSE
T ss_pred hCCCEEEECCCC------CCCCC---CH-HHHHHHHHHh------CCCCcEEEECCCCC-------HHHHHHHHHhCchH
Confidence 999999653321 11221 22 3444444332 23455555544432 24466666899996
Q ss_pred EEe
Q 012815 257 LFI 259 (456)
Q Consensus 257 Ifi 259 (456)
|=+
T Consensus 201 iG~ 203 (225)
T 1mzh_A 201 IGT 203 (225)
T ss_dssp EEE
T ss_pred HHH
Confidence 544
No 344
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=89.97 E-value=0.81 Score=46.57 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=86.5
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.++++.+.+.++++.+.|...+||-=+..+ ++... .-..++-+++|++++++. ++. .=|.|+......
T Consensus 162 ~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~---~~~~~--~~~~~~di~~v~avR~a~----~d~--~L~vDaN~~w~~ 230 (393)
T 3u9i_A 162 TTGSVTAAARAAQAIVARGVTTIKIKIGAGD---PDATT--IRTMEHDLARIVAIRDVA----PTA--RLILDGNCGYTA 230 (393)
T ss_dssp C---CHHHHHHHHHHHTTTCCEEEEECC----------C--HHHHHHHHHHHHHHHHHS----TTS--EEEEECCSCCCH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEeCCCc---ccccc--cccHHHHHHHHHHHHHHC----CCC--eEEEEccCCCCH
Confidence 3456788888899999999999999322100 00000 011456678888888775 353 446799888889
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHH---HhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL---~elG-v~~Vs~p~~ 312 (456)
++|++.++++.++..+..|+|-+ .+.+.++++++..+ +|+... .. ..+..++ -+.| +..+..=+.
T Consensus 231 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~i~~k~~ 302 (393)
T 3u9i_A 231 PDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRR-VPVAAD-----ES--VASATDAARLARNAAVDVLNIKLM 302 (393)
T ss_dssp HHHHHHHHTTTTTTCCCSEEECCSCTTCTTHHHHHHHTCS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCCCcHHHHHHHHhhCC-CcEEeC-----Cc--CCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999995555678899875 25678999998876 777643 11 2355444 3455 666555444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
.
T Consensus 303 ~ 303 (393)
T 3u9i_A 303 K 303 (393)
T ss_dssp H
T ss_pred c
Confidence 4
No 345
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=89.96 E-value=10 Score=38.41 Aligned_cols=144 Identities=14% Similarity=0.091 Sum_probs=88.1
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc-cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra-~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
|+.+.++|++.|=+++-+. ..++.+.++.+++. ...++.+=.- +.... +++..++|+.
T Consensus 31 a~~L~~~Gv~~IE~g~p~~--------------~~~~~~~~~~i~~~~~~~~v~~~~r---~~~~d----i~~a~~~g~~ 89 (382)
T 2ztj_A 31 AKALDEFGIEYIEVTTPVA--------------SPQSRKDAEVLASLGLKAKVVTHIQ---CRLDA----AKVAVETGVQ 89 (382)
T ss_dssp HHHHHHHTCSEEEECCTTS--------------CHHHHHHHHHHHTSCCSSEEEEEEE---SCHHH----HHHHHHTTCS
T ss_pred HHHHHHcCcCEEEEcCCcC--------------CHHHHHHHHHHHhcCCCcEEEEEcc---cChhh----HHHHHHcCCC
Confidence 5667788999998864221 13344666666653 2345544211 12323 5667789999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhC--CCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEE
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESG--SDIVIVARTDSRQALSLEESLRRSRAFADAGADVLF 258 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G--~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~If 258 (456)
.|+|=+.+++ -|.. +--.+.+|..++++.+++..++.| ....+.+ +|+. ....+..++-+++..++ ||.|.
T Consensus 90 ~v~i~~~~s~---~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~-ed~~-~~~~~~~~~~~~~~~~~-a~~i~ 162 (382)
T 2ztj_A 90 GIDLLFGTSK---YLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA-EDTF-RSEEQDLLAVYEAVAPY-VDRVG 162 (382)
T ss_dssp EEEEEECC------------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE-TTTT-TSCHHHHHHHHHHHGGG-CSEEE
T ss_pred EEEEEeccCH---HHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE-EeCC-CCCHHHHHHHHHHHHHh-cCEEE
Confidence 9999877642 3444 334577888888888887777766 3333322 4543 34678899999999999 99998
Q ss_pred ec---cCCCHHHHHHHHH
Q 012815 259 ID---ALASKEEMKAFCE 273 (456)
Q Consensus 259 ie---~~~s~eei~~i~~ 273 (456)
+. |.-.+.++.++.+
T Consensus 163 l~DT~G~~~P~~~~~lv~ 180 (382)
T 2ztj_A 163 LADTVGVATPRQVYALVR 180 (382)
T ss_dssp EEETTSCCCHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHH
Confidence 75 3445555555544
No 346
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=89.96 E-value=1.6 Score=43.20 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=43.8
Q ss_pred HHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 245 RSRAFADAGADVLFIDALASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
.++...++|||.|.++... .++++++++.+.+ +++- ..||-++ -+..++++.|+..++.|..
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~~~v~ie----aSGGIt~-~~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIARGKVALE----VSGNIDR-NSIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTTTCEEE----EESSCCT-TTHHHHHTTTCSEEECSHH
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhcCCceEE----EECCCCH-HHHHHHHHcCCCEEEEChh
Confidence 3445566899999999864 4788888887642 2222 2234443 5789999999999999753
No 347
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.92 E-value=1.1 Score=43.04 Aligned_cols=114 Identities=21% Similarity=0.239 Sum_probs=71.9
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
+||+.- -+++.+...++.+.+.|+..|.|--.. . ...+.+++ ++++. ++.+|-|-
T Consensus 37 v~Vir~-----~~~~~a~~~a~al~~gGi~~iEvt~~t--------~-----~a~e~I~~---l~~~~----~~~~iGaG 91 (232)
T 4e38_A 37 IPVIAI-----DNAEDIIPLGKVLAENGLPAAEITFRS--------D-----AAVEAIRL---LRQAQ----PEMLIGAG 91 (232)
T ss_dssp EEEECC-----SSGGGHHHHHHHHHHTTCCEEEEETTS--------T-----THHHHHHH---HHHHC----TTCEEEEE
T ss_pred EEEEEc-----CCHHHHHHHHHHHHHCCCCEEEEeCCC--------C-----CHHHHHHH---HHHhC----CCCEEeEC
Confidence 788763 135678888999999999999984432 0 11233333 33332 35666665
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcCCCEE
Q 012815 231 TDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELGFKLV 307 (456)
Q Consensus 231 TDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elGv~~V 307 (456)
| .. . .++++...+||||.|+.++. +. ++.+.++... +|.+. |. .|+.| ..++|++.|
T Consensus 92 T-Vl---t----~~~a~~Ai~AGA~fIvsP~~-~~-~vi~~~~~~g-i~~ip------Gv---~TptEi~~A~~~Gad~v 151 (232)
T 4e38_A 92 T-IL---N----GEQALAAKEAGATFVVSPGF-NP-NTVRACQEIG-IDIVP------GV---NNPSTVEAALEMGLTTL 151 (232)
T ss_dssp C-CC---S----HHHHHHHHHHTCSEEECSSC-CH-HHHHHHHHHT-CEEEC------EE---CSHHHHHHHHHTTCCEE
T ss_pred C-cC---C----HHHHHHHHHcCCCEEEeCCC-CH-HHHHHHHHcC-CCEEc------CC---CCHHHHHHHHHcCCCEE
Confidence 5 21 1 47788999999999998875 33 4444455443 56542 21 25544 567999988
Q ss_pred ec
Q 012815 308 AY 309 (456)
Q Consensus 308 s~ 309 (456)
-+
T Consensus 152 K~ 153 (232)
T 4e38_A 152 KF 153 (232)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 348
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.88 E-value=1.2 Score=46.83 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=58.9
Q ss_pred HHHHHHHhC-CC-ceeecccCChHHHHHHHHhCCcEEEecchHHh-hhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 79 KSLRQILEL-PG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-AARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 79 ~~Lr~ll~~-~~-~lv~pgayDalSArl~e~aGfdAI~vSG~avS-as~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
+.++++.+. ++ ++++.++.+.-.|+.++++|+|+|.++...-+ ....-..+.+ .+.-+.+..+...++..++|||+
T Consensus 259 ~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g-~p~~~~l~~v~~~~~~~~iPVIa 337 (490)
T 4avf_A 259 ERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVG-VPQISAIANVAAALEGTGVPLIA 337 (490)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBC-CCHHHHHHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCC-ccHHHHHHHHHHHhccCCCcEEE
Confidence 344444433 23 56666799999999999999999998511100 0000011112 22234444445555566899999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
|. |..++.++. ++.++||++|.+=
T Consensus 338 ~G--GI~~~~di~----kal~~GAd~V~vG 361 (490)
T 4avf_A 338 DG--GIRFSGDLA----KAMVAGAYCVMMG 361 (490)
T ss_dssp ES--CCCSHHHHH----HHHHHTCSEEEEC
T ss_pred eC--CCCCHHHHH----HHHHcCCCeeeec
Confidence 84 333444554 4456899999993
No 349
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=89.82 E-value=7.3 Score=39.31 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=101.0
Q ss_pred eecccCChHHHHH------HHHhCCcEEEecchHHhhhhcccCCC-CCCCHH---HHHHHHHHHHhcc-CCcEEEeC---
Q 012815 92 QGPACFDALSAKL------VEKSGFSFCFTSGFSISAARLALPDT-GFISYG---EMVDQGQLITQAV-SIPVIGDG--- 157 (456)
Q Consensus 92 v~pgayDalSArl------~e~aGfdAI~vSG~avSas~lG~PD~-~~lt~~---Eml~~~r~I~ra~-~iPVIaD~--- 157 (456)
.|||+|-..--++ +.++|.++|.+=|.- .. . .-|. +.-.++ =+...++.|.+.+ ++-|+.|.
T Consensus 56 SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~-~~-~--~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc 131 (337)
T 1w5q_A 56 SMPGVERLSIDQLLIEAEEWVALGIPALALFPVT-PV-E--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLC 131 (337)
T ss_dssp TSTTCEEEEHHHHHHHHHHHHHTTCCEEEEEECC-CG-G--GCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECST
T ss_pred CCCCceeeCHHHHHHHHHHHHHCCCCEEEEecCC-Cc-c--cCCcccCccCCCCChHHHHHHHHHHHCCCeEEEEeeecc
Confidence 5677664332233 334699988875531 00 0 0110 111111 2455677777776 47788884
Q ss_pred ---CC---------CCC-CHHHHHHHH---HHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 158 ---DN---------GYG-NAMNVKRTV---KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 158 ---Dt---------GYG-~~~nv~rtV---k~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
++ |+= |...+...+ -...+|||+-|-=-|- ++| ||.|++++-++.
T Consensus 132 ~YT~HGHcGil~~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~~ 192 (337)
T 1w5q_A 132 EFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDM--------MDG-----------RIGAIREALESA 192 (337)
T ss_dssp TTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSC--------CTT-----------HHHHHHHHHHHT
T ss_pred cCCCCCcceeeCCCCcCccHHHHHHHHHHHHHHHHcCCCeEecccc--------ccc-----------HHHHHHHHHHHC
Confidence 22 321 333344444 4456899988876663 444 455555555444
Q ss_pred C-CCeEEEEecchhh-------------c---------------ccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHH
Q 012815 222 G-SDIVIVARTDSRQ-------------A---------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAF 271 (456)
Q Consensus 222 G-~dfvIiARTDA~~-------------~---------------~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i 271 (456)
| .+.-|.+-+--++ + ..-+||++.+..=.+-|||+|+| |+++-.+.++++
T Consensus 193 G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~YLDIir~v 272 (337)
T 1w5q_A 193 GHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRV 272 (337)
T ss_dssp TCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGGGHHHHHHH
T ss_pred CCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcCCCchHHHHHHH
Confidence 4 3567776543321 0 01479999999999999999999 789999999999
Q ss_pred HHhCCCCceeee
Q 012815 272 CEISPLVPKMAN 283 (456)
Q Consensus 272 ~~~v~~vP~~~N 283 (456)
.+.+. +|+.+=
T Consensus 273 k~~~~-~PvaaY 283 (337)
T 1w5q_A 273 KDEFR-APTFVY 283 (337)
T ss_dssp HHHHC-SCEEEE
T ss_pred HHhcC-CCEEEE
Confidence 99886 787543
No 350
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=89.77 E-value=3.8 Score=41.79 Aligned_cols=126 Identities=12% Similarity=0.149 Sum_probs=79.2
Q ss_pred HHHHHHHHHhCccEEEeCCCCC--CCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHH
Q 012815 168 KRTVKGYIKAGFAGIILEDQVS--PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRR 245 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~--pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~R 245 (456)
.+.++++.+.|..++||- ... ..+.|...+. -+.++-+++|++++++. |+++.|.. |+.....+++|++-
T Consensus 161 ~~~a~~~~~~G~~~~K~~-~~~~~~~K~G~~~~~--~~~~~d~e~v~avR~a~---g~d~~l~v--DaN~~~~~~~A~~~ 232 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIW-PFDDFASITPHHISL--TDLKDGLEPFRKIRAAV---GQRIEIMC--ELHSLWGTHAAARI 232 (410)
T ss_dssp HHHHHHHHHTTCSEEEEC-TTHHHHTTCTTCCCH--HHHHHHHHHHHHHHHHH---TTSSEEEE--ECTTCBCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-CccCccccccCcCCH--HHHHHHHHHHHHHHHHc---CCCceEEE--ECCCCCCHHHHHHH
Confidence 456678888999999992 110 0022321110 12345678888887764 56776654 66677789999999
Q ss_pred HHHhHhcCCCEEEeccC----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 246 SRAFADAGADVLFIDAL----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 246 akAy~eAGAD~Ifie~~----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+.+. +. ..+..+ +-+.| +..|..-.
T Consensus 233 ~~~L~~~~i~--~iEqP~~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~~~d~v~~k~ 296 (410)
T 3dip_A 233 CNALADYGVL--WVEDPIAKMDNIPAVADLRRQTR-APICGG-----EN--LAGTRRFHEMLCADAIDFVMLDL 296 (410)
T ss_dssp HHHGGGGTCS--EEECCBSCTTCHHHHHHHHHHHC-CCEEEC-----TT--CCSHHHHHHHHHTTCCSEEEECT
T ss_pred HHHHHhcCCC--EEECCCCCcccHHHHHHHHhhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCeEeecc
Confidence 9999998765 55544 26788999998876 776643 21 234444 44445 56665533
No 351
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=89.76 E-value=1.2 Score=43.52 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=80.7
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecch----hhcccHHHHHHH
Q 012815 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS----RQALSLEESLRR 245 (456)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA----~~~~~ldeAI~R 245 (456)
.+...++.||+=|-|=+.. ..+| ++|.-.. |+.+++.. ..+..++-|--. +....++.-.+.
T Consensus 13 ~a~~A~~~GAdRIELc~~L------~~GG--lTPS~g~---i~~~~~~~---~ipv~vMIRPR~GdF~Ys~~E~~~M~~D 78 (256)
T 1twd_A 13 CALTAQQNGADRVELCAAP------KEGG--LTPSLGV---LKSVRQRV---TIPVHPIIRPRGGDFCYSDGEFAAILED 78 (256)
T ss_dssp HHHHHHHTTCSEEEECBCG------GGTC--BCCCHHH---HHHHHHHC---CSCEEEBCCSSSSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCc------ccCC--CCCCHHH---HHHHHHHc---CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 3456677999988885543 1222 5665444 34444332 356777777522 123457777888
Q ss_pred HHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccc
Q 012815 246 SRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPL 311 (456)
Q Consensus 246 akAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~ 311 (456)
.+.+.++|||.+++-.+ -+.+.++++.+...+.|+.+.+--.--.-|.-..++|.++||+||....
T Consensus 79 i~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG 149 (256)
T 1twd_A 79 VRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG 149 (256)
T ss_dssp HHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 99999999999998766 3678888888765545554432111011122236889999999999753
No 352
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.74 E-value=1.5 Score=43.89 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=62.3
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhccc--CCCCC----CCHHHHHHHHHHHHhccCC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLAL--PDTGF----ISYGEMVDQGQLITQAVSI 151 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~--PD~~~----lt~~Eml~~~r~I~ra~~i 151 (456)
.+.++++++. +..++..+.+.-.|+.++++|+|+|.+.|.... ...|. ++... .+ .+..++.+.+.+++
T Consensus 135 ~~~i~~~~~~-g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~G-Gh~g~~~~~~~~~~~~~~---~~~~l~~i~~~~~i 209 (369)
T 3bw2_A 135 REVIARLRRA-GTLTLVTATTPEEARAVEAAGADAVIAQGVEAG-GHQGTHRDSSEDDGAGIG---LLSLLAQVREAVDI 209 (369)
T ss_dssp HHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCS-EECCCSSCCGGGTTCCCC---HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHC-CCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcC-CcCCCccccccccccccc---HHHHHHHHHHhcCc
Confidence 3455665554 456777899999999999999999999653210 01121 11100 22 23455667777899
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 152 PVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
||+++. |..++.++. .+.++||+||.+=
T Consensus 210 PViaaG--GI~~~~~~~----~~l~~GAd~V~vG 237 (369)
T 3bw2_A 210 PVVAAG--GIMRGGQIA----AVLAAGADAAQLG 237 (369)
T ss_dssp CEEEES--SCCSHHHHH----HHHHTTCSEEEES
T ss_pred eEEEEC--CCCCHHHHH----HHHHcCCCEEEEC
Confidence 999983 444655554 4556899999984
No 353
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.74 E-value=0.62 Score=44.67 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=66.2
Q ss_pred ccccccccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc
Q 012815 69 TGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA 148 (456)
Q Consensus 69 ~~~~~a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra 148 (456)
+++.........+|+++.. +.++...|++.-.++.+++.|+|.|.++..--+ ...|+...++++ ..+.+++.
T Consensus 116 VHLg~~dl~~~~~r~~~~~-~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T---~tK~~~~~~gl~----~l~~~~~~ 187 (243)
T 3o63_A 116 LHLGQRDLPVNVARQILAP-DTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPT---PTKPGRAAPGLG----LVRVAAEL 187 (243)
T ss_dssp EEECTTSSCHHHHHHHSCT-TCEEEEEECSHHHHHHHHHSSCSEEEECCSSCC---CC-----CCCHH----HHHHHHTC
T ss_pred EEecCCcCCHHHHHHhhCC-CCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCC---CCCCCcchhhHH----HHHHHHHh
Confidence 4444433445677887654 467777899999999999999999999852211 234554345543 34556655
Q ss_pred --cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012815 149 --VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (456)
Q Consensus 149 --~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (456)
.++||++.. |- ++ ++++.+.++||+||-+=..
T Consensus 188 ~~~~iPvvAiG--GI-~~----~ni~~~~~aGa~gvav~sa 221 (243)
T 3o63_A 188 GGDDKPWFAIG--GI-NA----QRLPAVLDAGARRIVVVRA 221 (243)
T ss_dssp ---CCCEEEES--SC-CT----TTHHHHHHTTCCCEEESHH
T ss_pred ccCCCCEEEec--CC-CH----HHHHHHHHcCCCEEEEeHH
Confidence 589999982 22 33 3456778899999988543
No 354
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=89.68 E-value=1.7 Score=43.06 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=55.5
Q ss_pred HHHHHHh-CCCceeecc---cCChHHHHHHHHhCCcEEEecchHHh-hh-----h-cc----cCCCCCCCHHHHHHHHHH
Q 012815 80 SLRQILE-LPGVHQGPA---CFDALSAKLVEKSGFSFCFTSGFSIS-AA-----R-LA----LPDTGFISYGEMVDQGQL 144 (456)
Q Consensus 80 ~Lr~ll~-~~~~lv~pg---ayDalSArl~e~aGfdAI~vSG~avS-as-----~-lG----~PD~~~lt~~Eml~~~r~ 144 (456)
.++++.+ -+.|+++-+ .++.-.|+.++++|+++|.+++.+-. .. . ++ ..+.+ ++..+. ++.
T Consensus 169 ~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g-~~~~~~---l~~ 244 (349)
T 1p0k_A 169 RIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWG-ISTAAS---LAE 244 (349)
T ss_dssp HHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCS-CCHHHH---HHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccC-ccHHHH---HHH
Confidence 3444433 245676643 38999999999999999999843211 00 0 00 02333 333333 344
Q ss_pred HHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 145 ITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 145 I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
+.+.+ ++|||++. |..+..++. +++.+||++|.|
T Consensus 245 v~~~~~~ipvia~G--GI~~~~d~~----k~l~~GAd~V~i 279 (349)
T 1p0k_A 245 IRSEFPASTMIASG--GLQDALDVA----KAIALGASCTGM 279 (349)
T ss_dssp HHHHCTTSEEEEES--SCCSHHHHH----HHHHTTCSEEEE
T ss_pred HHHhcCCCeEEEEC--CCCCHHHHH----HHHHcCCCEEEE
Confidence 55555 79999983 333555555 444579999988
No 355
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.68 E-value=4.6 Score=38.64 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=61.0
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccc-----------cCHHHHHHHHHHHHHH
Q 012815 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-----------VSREEAVMRIKAAVDA 217 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~l-----------vp~ee~v~kI~AA~~A 217 (456)
.-+|.+. .||-+.+...+.++.+.++|+++|.| +-.+. -...+|..+ +..+...+-+++.++.
T Consensus 18 ~~i~~i~---~g~p~~~~~~~~~~~l~~~G~D~IEl-G~P~s--dP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (262)
T 2ekc_A 18 ALVSYLM---VGYPDYETSLKAFKEVLKNGTDILEI-GFPFS--DPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKE 91 (262)
T ss_dssp EEEEEEE---TTSSCHHHHHHHHHHHHHTTCSEEEE-ECCCS--CCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEec---CCCCChHHHHHHHHHHHHcCCCEEEE-CCCCC--CcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh
Confidence 3466664 67767777888899999999999988 22110 001122111 1112222223333322
Q ss_pred hHhh-CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHH
Q 012815 218 RKES-GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCE 273 (456)
Q Consensus 218 r~~~-G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~ 273 (456)
. +.+++++.-.+-....+++.-+ +...++|+|.+.++.++. +++.++.+
T Consensus 92 ---~~~~Pi~~m~y~n~v~~~g~~~f~---~~~~~aG~dgvii~dl~~-ee~~~~~~ 141 (262)
T 2ekc_A 92 ---FPDIPFLLMTYYNPIFRIGLEKFC---RLSREKGIDGFIVPDLPP-EEAEELKA 141 (262)
T ss_dssp ---CTTSCEEEECCHHHHHHHCHHHHH---HHHHHTTCCEEECTTCCH-HHHHHHHH
T ss_pred ---cCCCCEEEEecCcHHHHhhHHHHH---HHHHHcCCCEEEECCCCH-HHHHHHHH
Confidence 2 3466665333322233444444 445689999999988764 45555543
No 356
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.61 E-value=1.2 Score=46.86 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=58.7
Q ss_pred HHHHHHhC--CCceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 80 SLRQILEL--PGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~--~~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
.++++.+. +-++++-++.+.-.|+.+.++|+|+|.++ |.+-.....-....+ .+.-+.+..+...++..++|||+|
T Consensus 262 ~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIa~ 340 (496)
T 4fxs_A 262 RIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIAD 340 (496)
T ss_dssp HHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCC-ccHHHHHHHHHHHhccCCCeEEEe
Confidence 34444432 34566767999999999999999999986 211000000000111 233344444555555668999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
.. -.++.++. ++.++||++|.+=
T Consensus 341 GG--I~~~~di~----kala~GAd~V~iG 363 (496)
T 4fxs_A 341 GG--IRFSGDIS----KAIAAGASCVMVG 363 (496)
T ss_dssp SC--CCSHHHHH----HHHHTTCSEEEES
T ss_pred CC--CCCHHHHH----HHHHcCCCeEEec
Confidence 43 33454554 3456899999993
No 357
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.55 E-value=4.7 Score=40.59 Aligned_cols=131 Identities=24% Similarity=0.267 Sum_probs=68.1
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
++.++++|++++.+.+..... .++.|.. ++.+ ++.+++.+++||++ -|--++ +.++.+.++||++
T Consensus 171 a~~~~~agad~i~i~~~~~~~-~~~~~~~---~~~~----i~~l~~~~~~pvi~---ggi~t~----e~a~~~~~~Gad~ 235 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTLISA-EHVNTGG---EALN----LKEFIGSLDVPVIA---GGVNDY----TTALHMMRTGAVG 235 (393)
T ss_dssp HHHHHHTTCSEEEEECSSCCS-SCCCC--------C----HHHHHHHCSSCEEE---ECCCSH----HHHHHHHTTTCSE
T ss_pred HHHHHHCCCCEEEEeCCcccc-ccCCCcc---cHHH----HHHHHHhcCCCEEE---CCcCCH----HHHHHHHHcCCCE
Confidence 566677899998765322111 1222321 3333 45566667999999 121233 3456778899999
Q ss_pred EEeCCCCCCCCccCCCCcc----ccCHHHHHHHHHHHH-HHhHhhCC-CeEEEEecchhhcccHHHHHHHHHHhHhcCCC
Q 012815 182 IILEDQVSPKGCGHTRGRK----VVSREEAVMRIKAAV-DARKESGS-DIVIVARTDSRQALSLEESLRRSRAFADAGAD 255 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~----lvp~ee~v~kI~AA~-~Ar~~~G~-dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD 255 (456)
|.+ .. .||.+ +. -.|.-+.+..++.+. +...+.+. ++-|+|=-.-... ..+..+..+|||
T Consensus 236 i~v-g~-----Gg~~~-~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~-------~dv~kalalGA~ 301 (393)
T 2qr6_A 236 IIV-GG-----GENTN-SLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENS-------GDVVKAIACGAD 301 (393)
T ss_dssp EEE-SC-----CSCCH-HHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSH-------HHHHHHHHHTCS
T ss_pred EEE-CC-----Ccccc-cccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCH-------HHHHHHHHcCCC
Confidence 999 32 23432 11 145555555544331 11111232 2556654333222 224444558999
Q ss_pred EEEecc
Q 012815 256 VLFIDA 261 (456)
Q Consensus 256 ~Ifie~ 261 (456)
+|.+-.
T Consensus 302 ~V~iG~ 307 (393)
T 2qr6_A 302 AVVLGS 307 (393)
T ss_dssp EEEECG
T ss_pred EEEECH
Confidence 999854
No 358
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=89.54 E-value=6.4 Score=39.77 Aligned_cols=147 Identities=16% Similarity=0.124 Sum_probs=87.7
Q ss_pred HHHHHHHHhCCcEEEecc---hHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCCC-----CC-
Q 012815 100 LSAKLVEKSGFSFCFTSG---FSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDN-----GY- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vSG---~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~Dt-----GY- 161 (456)
-.|+.+.++|||+|=+-+ |-+.-. ..-.-|.--=+++. +++.+++|+++++ -||.+-+-- |+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 467888899999998863 333211 11223321114442 3445566666653 288875432 32
Q ss_pred -CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 162 -GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 162 -G~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+++ ++..+.++.++++|++.|++-... . +. +++++|+.++ +..++.+++.+
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-------~-~~------~~~~~ik~~~------~iPvi~~Ggit------- 297 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARESF-------G-GD------AIGQQLKAAF------GGPFIVNENFT------- 297 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC-------S-TT------CCHHHHHHHH------CSCEEEESSCC-------
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCCC-------C-CH------HHHHHHHHHc------CCCEEEeCCCC-------
Confidence 233 467889999999999999986542 1 11 3455554432 24566676642
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.++...+.| ||+|.+-- +.+++..+++.+..+
T Consensus 298 ---~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g~~ 334 (361)
T 3gka_A 298 ---LDSAQAALDAGQADAVAWGKLFIANPDLPRRFKLNAP 334 (361)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ---HHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHhCCC
Confidence 24466666777 99998843 455667888877654
No 359
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=89.48 E-value=5.2 Score=40.67 Aligned_cols=70 Identities=23% Similarity=0.353 Sum_probs=42.5
Q ss_pred cCCc--EEEeCCCCCC-----CHHHHHHHHHHHHHhCc---cEEEeCCCCC------CCCccCCCCcccc----C---HH
Q 012815 149 VSIP--VIGDGDNGYG-----NAMNVKRTVKGYIKAGF---AGIILEDQVS------PKGCGHTRGRKVV----S---RE 205 (456)
Q Consensus 149 ~~iP--VIaD~DtGYG-----~~~nv~rtVk~l~~AGa---aGI~IEDq~~------pK~CGH~~gk~lv----p---~e 205 (456)
.++| ||+|+=++-+ +-..+...+..-+.+|+ +|+.||--.. +..+....|+.++ + ++
T Consensus 256 ~~lp~~VivD~SH~ns~k~~~~Q~~vv~~laa~ia~G~~~i~GlmiEshl~dG~Q~l~~~~~l~yG~SITD~Ci~w~~t~ 335 (350)
T 1n8f_A 256 AGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTD 335 (350)
T ss_dssp TTCCCCEEEECSGGGTTTCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSSSBBCCSSSCSCCCTTCBSSSCBBCHHHHH
T ss_pred cCCCCeEEEECCCcccCccccccHHHHHHHHHHHHcCCCcccEEEEEeccCCCCcCCCCCccccCCCcCccccCCHHHHH
Confidence 4789 9999988633 22335555546678899 9999986531 2222233454433 2 55
Q ss_pred HHHHHHHHHHHHh
Q 012815 206 EAVMRIKAAVDAR 218 (456)
Q Consensus 206 e~v~kI~AA~~Ar 218 (456)
.++..+..++.+|
T Consensus 336 ~ll~~la~~~~~r 348 (350)
T 1n8f_A 336 ALLRQLANAVKAR 348 (350)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6666666666554
No 360
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=89.45 E-value=0.97 Score=44.66 Aligned_cols=97 Identities=13% Similarity=0.115 Sum_probs=57.3
Q ss_pred HHHHHHHhCCCceeeccc---CChHHHHHHHHhCCcEEEecchHHh--hh----hc------cc-CCCCCCCHHHHHHHH
Q 012815 79 KSLRQILELPGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFSIS--AA----RL------AL-PDTGFISYGEMVDQG 142 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~pga---yDalSArl~e~aGfdAI~vSG~avS--as----~l------G~-PD~~~lt~~Eml~~~ 142 (456)
+.++++.+-+.|+.+-++ ++.-.|+.++++|+|+|.+|+.+-. +. .. ++ -|.+ ++.-+. +
T Consensus 172 ~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~---l 247 (332)
T 1vcf_A 172 ERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIG-IPTARA---I 247 (332)
T ss_dssp HHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCS-CBHHHH---H
T ss_pred HHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhcc-ccHHHH---H
Confidence 344444442446666556 8888899999999999999854310 00 00 00 2222 233333 3
Q ss_pred HHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 143 QLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 143 r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
..+.+.+ ++|||+|. |.-+...+. +++.+||++|.|=
T Consensus 248 ~~v~~~~~~ipvia~G--GI~~~~d~~----kal~~GAd~V~ig 285 (332)
T 1vcf_A 248 LEVREVLPHLPLVASG--GVYTGTDGA----KALALGADLLAVA 285 (332)
T ss_dssp HHHHHHCSSSCEEEES--SCCSHHHHH----HHHHHTCSEEEEC
T ss_pred HHHHHhcCCCeEEEEC--CCCCHHHHH----HHHHhCCChHhhh
Confidence 4555666 79999983 333444444 3334799999983
No 361
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.44 E-value=1.7 Score=41.77 Aligned_cols=100 Identities=21% Similarity=0.154 Sum_probs=58.8
Q ss_pred HHHHHHhC-CCceee---cccCChHH-HHHHHHhCCcEEEecchHHhhhhcc---cC-----CC---CCCCHHHHHHHHH
Q 012815 80 SLRQILEL-PGVHQG---PACFDALS-AKLVEKSGFSFCFTSGFSISAARLA---LP-----DT---GFISYGEMVDQGQ 143 (456)
Q Consensus 80 ~Lr~ll~~-~~~lv~---pgayDalS-Arl~e~aGfdAI~vSG~avSas~lG---~P-----D~---~~lt~~Eml~~~r 143 (456)
.++++.+. +.++.+ |+..|... |+.++++|+++|-+++........+ .| +. +.......+..++
T Consensus 155 ii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~ 234 (311)
T 1ep3_A 155 LVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIH 234 (311)
T ss_dssp HHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHH
Confidence 34444333 445543 57777665 8999999999999975321100000 00 00 0001112356777
Q ss_pred HHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 144 LITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 144 ~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
.+.+.+++|||+. .|..+.+++. +++++||++|.+=
T Consensus 235 ~i~~~~~ipvia~--GGI~~~~d~~----~~l~~GAd~V~vg 270 (311)
T 1ep3_A 235 QVAQDVDIPIIGM--GGVANAQDVL----EMYMAGASAVAVG 270 (311)
T ss_dssp HHHTTCSSCEEEC--SSCCSHHHHH----HHHHHTCSEEEEC
T ss_pred HHHHhcCCCEEEE--CCcCCHHHHH----HHHHcCCCEEEEC
Confidence 8888889999986 3455655554 4556899999883
No 362
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=89.42 E-value=2.5 Score=42.66 Aligned_cols=126 Identities=20% Similarity=0.235 Sum_probs=83.3
Q ss_pred CCCCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
|.|++......++++.+ .|...+||- .|.. +.++-+++|++++++. |+++.+ |.|+.....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~~------~~~~d~~~v~avR~a~---g~~~~l--~vDaN~~~~ 206 (382)
T 3dgb_A 145 ASGDTAKDIAEAQKMLDLRRHRIFKLK-------IGAG------EVDRDLAHVIAIKKAL---GDSASV--RVDVNQAWD 206 (382)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCSEEEEE-------CCSS------CHHHHHHHHHHHHHHH---GGGSEE--EEECTTCBC
T ss_pred cCCChHHHHHHHHHHHHhCCCCEEEEe-------eCCC------CHHHHHHHHHHHHHHc---CCCCeE--EEeCCCCCC
Confidence 45677665555555555 699999983 2321 3456688999888775 344443 348888888
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.|. .|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| +..+..-.
T Consensus 207 ~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~~~~-ipIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~ 276 (382)
T 3dgb_A 207 EAVALRACRILGGNGI--DLIEQPISRNNRAGMVRLNASSP-APIMAD-----ES--IECVEDAFNLAREGAASVFALKI 276 (382)
T ss_dssp HHHHHHHHHHHHTTTC--CCEECCBCTTCHHHHHHHHHHCS-SCEEES-----TT--CSSHHHHHHHHHHTCCSEEEECH
T ss_pred HHHHHHHHHHHhhcCc--CeeeCCCCccCHHHHHHHHHhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEecc
Confidence 9999999999999864 577764 36788999999876 787653 11 234544 44444 66666644
Q ss_pred hH
Q 012815 312 SL 313 (456)
Q Consensus 312 ~l 313 (456)
.-
T Consensus 277 ~~ 278 (382)
T 3dgb_A 277 AK 278 (382)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 363
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=89.35 E-value=0.76 Score=46.59 Aligned_cols=110 Identities=15% Similarity=0.079 Sum_probs=67.9
Q ss_pred cCCcEEEeCCCCCCCH-HHHHHHHHHH-HHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHH-HHHhHhhCCCe
Q 012815 149 VSIPVIGDGDNGYGNA-MNVKRTVKGY-IKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAA-VDARKESGSDI 225 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~-~nv~rtVk~l-~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA-~~Ar~~~G~df 225 (456)
.+.+|++|.=.+ +. ..+...++.+ .+.|++.+.+---. |.. -++++ +++....++.+
T Consensus 148 ~g~~VflDlK~~--DIpnTv~~ya~~~~~~lgaD~vTVh~~~---------G~~---------~l~~a~~~~~~~~~~~v 207 (342)
T 3n3m_A 148 LNIPTILDMKIN--DIGNTVKNYRKFIFEYLKSDSCTVNIYM---------GTN---------MLKDICYDEEKNKYYSA 207 (342)
T ss_dssp HTCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCTT---------CSG---------GGGGTSEETTTTEECEE
T ss_pred CCCeEEEEeecC--CcHHHHHHHHHHHHHhcCCCEEEEcccC---------CHH---------HHHHHHHHHHhhcCCcE
Confidence 479999998765 53 3344556654 45799999984321 221 12222 12222224578
Q ss_pred EEEEecchhhcccH------------HHHHHHHHHhH-------hcCCCEEEeccCCCHHHHHHHHHhCCCCc
Q 012815 226 VIVARTDSRQALSL------------EESLRRSRAFA-------DAGADVLFIDALASKEEMKAFCEISPLVP 279 (456)
Q Consensus 226 vIiARTDA~~~~~l------------deAI~RakAy~-------eAGAD~Ifie~~~s~eei~~i~~~v~~vP 279 (456)
+++++|-......+ +...+++..+. ++|.|.+++.+ ++.+|++.+.+..|..+
T Consensus 208 ~vvt~tSs~~~~dlq~~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~G~~GvV~GA-Tsp~e~~~iR~~~p~~~ 279 (342)
T 3n3m_A 208 FVLVKTTNPDSAIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNNEFIGFVVGA-NSYDEMNYIRTYFPNCY 279 (342)
T ss_dssp EEEEECCSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCEEEEECT-TCHHHHHHHHHHSTTCC
T ss_pred EEEEeCCCCCHHHHHHHhccCCChHHHHHHHHHHHHHHhcccccccCCceEEECC-CCHHHHHHHHHhCCCCe
Confidence 99999877543222 22455555554 78999999987 46788988888776433
No 364
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=89.35 E-value=5.1 Score=38.59 Aligned_cols=143 Identities=14% Similarity=0.114 Sum_probs=82.3
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCC-CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~-~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
+=.++++|.|......-...++..++.||+.|-+==.. |.. .| ..+.+.+-|++.+++... ..+.+|-
T Consensus 81 v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNi-----g~lk~g----~~~~v~~eI~~v~~a~~~--~~lKVIl 149 (239)
T 3ngj_A 81 VCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINI-----GMVKAK----KYDDVEKDVKAVVDASGK--ALTKVII 149 (239)
T ss_dssp EEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCH-----HHHHTT----CHHHHHHHHHHHHHHHTT--SEEEEEC
T ss_pred EEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeeh-----HHhccc----cHHHHHHHHHHHHHHhcC--CceEEEE
Confidence 33467888887666555556678888899998652221 110 01 235677888888888752 2344443
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEEec-c----CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCC
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLFID-A----LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGF 304 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~Ifie-~----~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv 304 (456)
=|..+ .-++...-++...++|||.|=.- | -.+.+.++.+.+.+. -++. +-..||-...-+..++-++|.
T Consensus 150 Et~~L---t~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg-~~v~--VKasGGIrt~~da~~~i~aGA 223 (239)
T 3ngj_A 150 ECCYL---TNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVG-DKAL--VKAAGGIRTFDDAMKMINNGA 223 (239)
T ss_dssp CGGGS---CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHG-GGSE--EEEESSCCSHHHHHHHHHTTE
T ss_pred ecCCC---CHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhC-CCce--EEEeCCCCCHHHHHHHHHhcc
Confidence 33322 33555555677889999999764 2 235566666655543 1222 222233221234566778999
Q ss_pred CEEecc
Q 012815 305 KLVAYP 310 (456)
Q Consensus 305 ~~Vs~p 310 (456)
.|+-..
T Consensus 224 ~riGtS 229 (239)
T 3ngj_A 224 SRIGAS 229 (239)
T ss_dssp EEEEES
T ss_pred cceecc
Confidence 987553
No 365
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=89.34 E-value=1.9 Score=44.76 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=60.1
Q ss_pred CCc-EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCC----C----CccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 150 SIP-VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP----K----GCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 150 ~iP-VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~p----K----~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
.+| |++=+--++ +..++.+.++.++++||+||.+-..+.. + ..|...|+++.|.. .+-|+.++++.
T Consensus 268 ~~P~V~VKi~pd~-~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~a--l~~I~~v~~~v-- 342 (415)
T 3i65_A 268 KKPLVFVKLAPDL-NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDIS--TKFICEMYNYT-- 342 (415)
T ss_dssp SCCEEEEEECSCC-CHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHH--HHHHHHHHHHT--
T ss_pred CCCeEEEEecCCC-CHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHH--HHHHHHHHHHh--
Confidence 689 888776665 3456888889999999999999765421 0 11222345544432 33444444332
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
+.++-|++=-+-... +.+..+.++|||+|.+-
T Consensus 343 -~~~iPIIg~GGI~s~-------eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 343 -NKQIPIIASGGIFSG-------LDALEKIEAGASVCQLY 374 (415)
T ss_dssp -TTCSCEEECSSCCSH-------HHHHHHHHHTEEEEEES
T ss_pred -CCCCCEEEECCCCCH-------HHHHHHHHcCCCEEEEc
Confidence 335666765554432 44555667999999974
No 366
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=89.32 E-value=3.7 Score=40.29 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=56.1
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|-+...+.+.++++++.||+-|-|-... -..|-+-++.+|-.+|+.-++++..+. +..|-- |....
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGges------trpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSI--DT~~~---- 90 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGES------SRPGATRVDPAVETSRVIPVVKELAAQ--GITVSI--DTMRA---- 90 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------------HHHHHHHHHHHHHT--TCCEEE--ECSCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCcc------CCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEE--eCCCH----
Confidence 4457788888999999999999886542 112333456666666766666655432 333332 44432
Q ss_pred HHHHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+=+++..++||++|- +.+....+++..++++.. .|+.+
T Consensus 91 ---~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~-~~vVl 129 (280)
T 1eye_A 91 ---DVARAALQNGAQMVNDVSGGRADPAMGPLLAEAD-VPWVL 129 (280)
T ss_dssp ---HHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHT-CCEEE
T ss_pred ---HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhC-CeEEE
Confidence 224444557999986 344431246666776665 56544
No 367
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.21 E-value=9.6 Score=36.74 Aligned_cols=159 Identities=9% Similarity=0.007 Sum_probs=95.8
Q ss_pred HHHHHHHHhCCC-ceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh---ccCCcE
Q 012815 78 AKSLRQILELPG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPV 153 (456)
Q Consensus 78 a~~Lr~ll~~~~-~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r---a~~iPV 153 (456)
.+.++.+.+.++ ++.+.. .+.-..+.+-++|++.|.+...+ |-. +-.-. -..+.+|.++.++.+.+ ..+++|
T Consensus 61 ~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~~~~-S~~-h~~~~-~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 61 REVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADEIAVFISA-SEG-FSKAN-INCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp HHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSEEEEEEES-CHH-HHHHH-TSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCEEEEEEec-CHH-HHHHH-cCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344555543322 332322 34555566677899988776211 100 11111 23588888888776654 346777
Q ss_pred E------EeCCCC-CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeE
Q 012815 154 I------GDGDNG-YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIV 226 (456)
Q Consensus 154 I------aD~DtG-YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfv 226 (456)
. ++.|++ +-++..+.+.++.+.++|+..|.|-|.. |. ..+++..+.|++.++.... ..+.
T Consensus 137 ~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~-----G~------~~P~~~~~lv~~l~~~~~~--~~l~ 203 (295)
T 1ydn_A 137 RGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTI-----GR------GTPDTVAAMLDAVLAIAPA--HSLA 203 (295)
T ss_dssp EEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETT-----SC------CCHHHHHHHHHHHHTTSCG--GGEE
T ss_pred EEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCC-----CC------cCHHHHHHHHHHHHHhCCC--CeEE
Confidence 6 555554 3478889999999999999999999864 22 3456777788777654321 2344
Q ss_pred EEEecchhhcccHHHHHHHHHHhHhcCCCEEEe
Q 012815 227 IVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (456)
Q Consensus 227 IiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi 259 (456)
+=+-.|.- -++.-..+..++||+.|=+
T Consensus 204 ~H~Hn~~G------la~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 204 GHYHDTGG------RALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp EEEBCTTS------CHHHHHHHHHHHTCCEEEE
T ss_pred EEECCCcc------hHHHHHHHHHHhCCCEEEe
Confidence 44433432 2345566777899997654
No 368
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.18 E-value=6.5 Score=37.58 Aligned_cols=115 Identities=9% Similarity=0.083 Sum_probs=61.2
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcccc-----------CHHHHHHHHHHHHHHh
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVV-----------SREEAVMRIKAAVDAR 218 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lv-----------p~ee~v~kI~AA~~Ar 218 (456)
-+|.|. .||-+..+..+.++.+.++|+++|+| |-.+ .-...+|..+. ..+...+-|++.++..
T Consensus 19 ~i~~i~---~gdp~~~~~~~~~~~l~~~GaD~iei-g~P~--sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (268)
T 1qop_A 19 FVPFVT---LGDPGIEQSLKIIDTLIDAGADALEL-GVPF--SDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKH 92 (268)
T ss_dssp EEEEEE---TTSSCHHHHHHHHHHHHHTTCSSEEE-ECCC--SCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEee---CCCCCHHHHHHHHHHHHHCCCCEEEE-CCCC--CCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 467765 56555578889999999999999999 3221 00112222111 1122223333333321
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCC--HHHHHHHHHhC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALAS--KEEMKAFCEIS 275 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s--~eei~~i~~~v 275 (456)
...+++++...+.....+.+.- ++.+.++|||.+.++..+. .+++.+.+++.
T Consensus 93 --~~~Pv~lm~y~n~v~~~g~~~~---~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 93 --PTIPIGLLMYANLVFNNGIDAF---YARCEQVGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp --SSSCEEEEECHHHHHTTCHHHH---HHHHHHHTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred --CCCCEEEEEcccHHHHhhHHHH---HHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 1234555533332223344433 4556789999998887663 23444444544
No 369
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=89.16 E-value=1.2 Score=44.79 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=53.4
Q ss_pred HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 106 EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 106 e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
++.|.+.|-+++-+ ..|+...++.+|+...++.|.+.+++||++| |-||+..=.+.++...++|+.
T Consensus 91 ~~~GAdiIDIg~eS------trP~~~~vs~ee~~~~V~~v~~~~~vPlsID---g~~~~T~~~eV~eaAleagag 156 (323)
T 4djd_D 91 AEYGADLIYLKLDG------ADPEGANHSVDQCVATVKEVLQAVGVPLVVV---GCGDVEKDHEVLEAVAEAAAG 156 (323)
T ss_dssp HTTCCSEEEEECGG------GCTTTTCCCHHHHHHHHHHHHHHCCSCEEEE---CCSCHHHHHHHHHHHHHHTTT
T ss_pred HHcCCCEEEEcCcc------CCCCCCCCCHHHHHHHHHHHHhhCCceEEEE---CCCCCCCCHHHHHHHHHhcCC
Confidence 47799999998743 4788888999999999999999999999999 667765445556777777865
No 370
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=89.13 E-value=5.4 Score=38.34 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=53.8
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012815 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (456)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy 249 (456)
.++++..+|++.|.|.=+ |. +.|.+...+.++++.. .+.-++.|...... ...++.
T Consensus 29 ~~e~a~~~g~D~vilDlE-------ha----v~~~~k~~~~l~a~~~------~~~~~~VRVn~~~~-------~di~~~ 84 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCE-------HA----AYTFREINHLVSVAKN------AGVSVLVRIPQVDR-------AHVQRL 84 (261)
T ss_dssp HHHHHHHTTCSEEEEESS-------SS----CCCHHHHHHHHHHHHH------HTCEEEEECSSCCH-------HHHHHH
T ss_pred HHHHHhcCCcCEEEEecc-------CC----CCCHHHHHHHHHHHhh------cCCeEEEEeCCCCH-------HHHHHH
Confidence 345666789999986332 21 3344544445544332 13456778765422 245666
Q ss_pred HhcCCCEEEeccCCCHHHHHHHHHhC
Q 012815 250 ADAGADVLFIDALASKEEMKAFCEIS 275 (456)
Q Consensus 250 ~eAGAD~Ifie~~~s~eei~~i~~~v 275 (456)
.++|+|.|+++.+.+.++++++.+..
T Consensus 85 ld~G~~gI~lP~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 85 LDIGAEGFMIPGVQSAETMRETVRLA 110 (261)
T ss_dssp HHHTCCEEEETTCCSHHHHHHHHHHH
T ss_pred HhcCCCEEEECCcCCHHHHHHHHHHh
Confidence 78999999999999999999988764
No 371
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=88.91 E-value=6.3 Score=38.33 Aligned_cols=171 Identities=12% Similarity=0.051 Sum_probs=94.8
Q ss_pred cccccccCCCccccccccH---HHHHHHHHh--CCCceeecccCCh------HHHHHHHHhCCcEEEecchHHhhhhccc
Q 012815 59 NRTRVYRKNSTGVEACLSP---AKSLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLAL 127 (456)
Q Consensus 59 ~~~R~y~~~s~~~~~a~~~---a~~Lr~ll~--~~~~lv~pgayDa------lSArl~e~aGfdAI~vSG~avSas~lG~ 127 (456)
|+.=.+.-||....+..+. .+-++...+ .++..++.|+-.. --|+.++++|+|++.+..-
T Consensus 34 Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P--------- 104 (294)
T 2ehh_A 34 GTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP--------- 104 (294)
T ss_dssp TCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC---------
T ss_pred CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC---------
Confidence 3333455577666653332 222333332 3444455555442 2356667789999987631
Q ss_pred CCCCCCCHHHHHHHHHHHHhccCCcEEE-eCCC--CCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccC
Q 012815 128 PDTGFISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVS 203 (456)
Q Consensus 128 PD~~~lt~~Eml~~~r~I~ra~~iPVIa-D~Dt--GYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp 203 (456)
-....+-+++.+|-++|++++++||+. +.+. |+. .++.+.+.+++. -.+.|||-.. |.
T Consensus 105 -~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgiKds~-------gd-------- 166 (294)
T 2ehh_A 105 -YYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASEC--ENIVASKEST-------PN-------- 166 (294)
T ss_dssp -CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEECC-------SC--------
T ss_pred -CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhC--CCEEEEEeCC-------CC--------
Confidence 112247899999999999999999875 7763 543 344455554222 4688998322 21
Q ss_pred HHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHh
Q 012815 204 REEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (456)
Q Consensus 204 ~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (456)
..++...++.. +++|.|..=.|... ..+..+|++.++--.- --++++.++.+.
T Consensus 167 ----~~~~~~~~~~~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~an~~P~~~~~l~~a 220 (294)
T 2ehh_A 167 ----MDRISEIVKRL---GESFSVLSGDDSLT-----------LPMMALGAKGVISVANNVMPREVKELIRA 220 (294)
T ss_dssp ----HHHHHHHHHHH---CTTSEEEESSGGGH-----------HHHHHTTCCEEEESGGGTCHHHHHHHHHH
T ss_pred ----HHHHHHHHHhc---CCCeEEEECcHHHH-----------HHHHHCCCCEEEeCHHHhhHHHHHHHHHH
Confidence 22333333222 35787776666542 2234589998765321 134555555543
No 372
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=88.89 E-value=3.2 Score=42.08 Aligned_cols=146 Identities=16% Similarity=0.192 Sum_probs=90.4
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC-----Cc--cCCCCccccC---HHHHHHHHHHHHHHhH
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK-----GC--GHTRGRKVVS---REEAVMRIKAAVDARK 219 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK-----~C--GH~~gk~lvp---~ee~v~kI~AA~~Ar~ 219 (456)
.+|+-+-. +..+++.+.+.++++.+.|..+++|-=+..+. .+ |...|..+.+ .++.+++|++++++.
T Consensus 122 ~v~~y~~~--~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~- 198 (401)
T 3sbf_A 122 AIPVYTHA--TSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY- 198 (401)
T ss_dssp SEEEEEEE--EESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-
T ss_pred eeeEEEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc-
Confidence 36664421 23467889999999999999999984322100 00 0001111111 345677788777664
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH
Q 012815 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (456)
Q Consensus 220 ~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~ 296 (456)
|+++-|.. |+......++|++-++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ +. ..+.
T Consensus 199 --G~d~~l~v--Dan~~~~~~~A~~~~~~L~~~~i~--~iEqP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~ 264 (401)
T 3sbf_A 199 --GNQFHILH--DVHERLFPNQAIQFAKEVEQYKPY--FIEDILPPNQTEWLDNIRSQSS-VSLGLG-----EL--FNNP 264 (401)
T ss_dssp --TTSSEEEE--ECTTCSCHHHHHHHHHHHGGGCCS--CEECSSCTTCGGGHHHHHTTCC-CCEEEC-----TT--CCSH
T ss_pred --CCCCEEEE--ECCCCCCHHHHHHHHHHHHhcCCC--EEECCCChhHHHHHHHHHhhCC-CCEEeC-----Cc--cCCH
Confidence 56776654 677777899999999999999865 55643 25678888888876 787653 21 2344
Q ss_pred H---HHHhcC-CCEEeccch
Q 012815 297 L---ELEELG-FKLVAYPLS 312 (456)
Q Consensus 297 ~---eL~elG-v~~Vs~p~~ 312 (456)
. ++-+.| +..|..-..
T Consensus 265 ~~~~~~i~~~~~d~v~~k~~ 284 (401)
T 3sbf_A 265 EEWKSLIANRRIDFIRCHVS 284 (401)
T ss_dssp HHHHHHHHTTCCSEECCCGG
T ss_pred HHHHHHHhcCCCCEEecCcc
Confidence 4 444456 666665444
No 373
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=88.88 E-value=4.3 Score=41.14 Aligned_cols=128 Identities=11% Similarity=0.127 Sum_probs=78.9
Q ss_pred CHHH-HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccc-cCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 163 NAMN-VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-VSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 163 ~~~n-v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~l-vp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
++.. +.+..+...+.|...+||-= |...+... ..++..+++|++++++. |+++-|. .|+......+
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~Kv-------G~~~~~d~~~~~~~~~~~v~avReav---G~d~~l~--vDaN~~~~~~ 213 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRA-------GAEVGRNRDEWPGRTEEIIPTMRREL---GDDVDLL--IDANSCYTPD 213 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEC-------SCTTCTTCCSSTTHHHHHHHHHHHHH---CSSSEEE--EECTTCCCHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcc-------CCCcccccccchhHHHHHHHHHHHHh---CCCCeEE--EeCCCCcCHH
Confidence 3444 44444445678999999832 22111111 01223456777776664 6676664 4777778899
Q ss_pred HHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccch
Q 012815 241 ESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPLS 312 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~~ 312 (456)
+|++.++++.+.|.+ |+|-+ .+.+.++++.+.++ +|+..+ .. ..+..+ +-+.| +..+-.-..
T Consensus 214 ~A~~~~~~l~~~~i~--~iEeP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 214 RAIEVGHMLQDHGFC--HFEEPCPYWELAQTKQVTDALD-IDVTGG-----EQ--DCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp HHHHHHHHHHHTTCC--EEECCSCTTCHHHHHHHHHHCS-SCEEEC-----TT--CCCHHHHHHHHHHTCCSEECCCHH
T ss_pred HHHHHHHHHhhcCCe--EEECCCCccCHHHHHHHHHhcC-CCEEcC-----Cc--cCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999998754 66764 26788999999877 787653 11 234444 44555 555554433
No 374
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=88.88 E-value=6.5 Score=37.92 Aligned_cols=137 Identities=18% Similarity=0.205 Sum_probs=83.2
Q ss_pred HHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 142 GQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 142 ~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
.+.|++.+++||+. =|++ -++.+++ +...+||++|-|--. ..+.+ .++...+..+++
T Consensus 93 L~~ir~~v~lPvLr-KDfi-~~~~qi~----ea~~~GAD~ilLi~a-------------~l~~~----~l~~l~~~a~~l 149 (251)
T 1i4n_A 93 VRAARNLTCRPILA-KDFY-IDTVQVK----LASSVGADAILIIAR-------------ILTAE----QIKEIYEAAEEL 149 (251)
T ss_dssp HHHHHTTCCSCEEE-ECCC-CSTHHHH----HHHHTTCSEEEEEGG-------------GSCHH----HHHHHHHHHHTT
T ss_pred HHHHHHhCCCCEEE-eeCC-CCHHHHH----HHHHcCCCEEEEecc-------------cCCHH----HHHHHHHHHHHc
Confidence 45677788999995 3444 2444444 466799999998432 22333 344444445555
Q ss_pred CCCeEEEEecchhhcccHHHHHHHHHHhHhc-CCCEEEeccC------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCC
Q 012815 222 GSDIVIVARTDSRQALSLEESLRRSRAFADA-GADVLFIDAL------ASKEEMKAFCEISPLVPKMANMLEGGGKTPIL 294 (456)
Q Consensus 222 G~dfvIiARTDA~~~~~ldeAI~RakAy~eA-GAD~Ifie~~------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~l 294 (456)
|-+.++=..|. +| ++...++ |+|+|-+.-. .+.+...++.+.+|. ...-+.++|=.+| -
T Consensus 150 Gl~~lvEv~~~-------eE----~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~--~~~vIaEsGI~t~-e 215 (251)
T 1i4n_A 150 GMDSLVEVHSR-------ED----LEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPD--DTVVVAESGIKDP-R 215 (251)
T ss_dssp TCEEEEEECSH-------HH----HHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCT--TSEEEEESCCCCG-G
T ss_pred CCeEEEEeCCH-------HH----HHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCC--CCEEEEeCCCCCH-H
Confidence 54455444432 22 4455678 9999988752 244566777777652 1122335532333 3
Q ss_pred CHHHHHhcCCCEEeccchHHHH
Q 012815 295 NPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 295 t~~eL~elGv~~Vs~p~~ll~a 316 (456)
+...+.++ +.-|..|.+++++
T Consensus 216 dv~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 216 ELKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp GHHHHTTT-CSEEEECHHHHHC
T ss_pred HHHHHHHh-CCEEEEcHHHcCC
Confidence 46778889 9999999998875
No 375
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=88.84 E-value=1.8 Score=42.76 Aligned_cols=92 Identities=20% Similarity=0.360 Sum_probs=60.1
Q ss_pred HHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCC
Q 012815 79 KSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGD 158 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~D 158 (456)
+.++.+.+ .+..+++.+.+.-.|+.++++|+|+|.+.|.... ...| ...++ ..++.+.+.+++||+++.
T Consensus 115 ~~~~~l~~-~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~G-G~~G----~~~~~----~ll~~i~~~~~iPviaaG- 183 (326)
T 3bo9_A 115 KYIRELKE-NGTKVIPVVASDSLARMVERAGADAVIAEGMESG-GHIG----EVTTF----VLVNKVSRSVNIPVIAAG- 183 (326)
T ss_dssp HHHHHHHH-TTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSS-EECC----SSCHH----HHHHHHHHHCSSCEEEES-
T ss_pred HHHHHHHH-cCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCC-ccCC----CccHH----HHHHHHHHHcCCCEEEEC-
Confidence 33444444 3566778889999999999999999999764311 1113 11222 344566667799999984
Q ss_pred CCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 159 NGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 159 tGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
|..+..++. ++.++||+||.+=-
T Consensus 184 -GI~~~~dv~----~al~~GA~gV~vGs 206 (326)
T 3bo9_A 184 -GIADGRGMA----AAFALGAEAVQMGT 206 (326)
T ss_dssp -SCCSHHHHH----HHHHHTCSEEEESH
T ss_pred -CCCCHHHHH----HHHHhCCCEEEech
Confidence 455666665 44457999999843
No 376
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=88.77 E-value=12 Score=38.02 Aligned_cols=229 Identities=10% Similarity=0.002 Sum_probs=131.9
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhc--ccCCC-CC----CCHHHHHHHHHHHH
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARL--ALPDT-GF----ISYGEMVDQGQLIT 146 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~l--G~PD~-~~----lt~~Eml~~~r~I~ 146 (456)
.+-|....+.+--+.+.|+++.-+++.+ ++.+.+.|.-.|-+-+.... |++.. .. ...-.+..+++.++
T Consensus 18 ~~ll~~A~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A 97 (358)
T 1dos_A 18 QKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMA 97 (358)
T ss_dssp HHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHH
Confidence 3445555556656889999999887765 55688888766544332221 33321 00 00112456777788
Q ss_pred hccCCcEEEeCCCCCCC----HHHHHHHH----HHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 147 QAVSIPVIGDGDNGYGN----AMNVKRTV----KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 147 ra~~iPVIaD~DtGYG~----~~nv~rtV----k~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
+..++||+.=.|+|.-. ...+.+.. +...++|...|.|... | .|.||=++.-+..++-+
T Consensus 98 ~~~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS-------~------~p~eENI~~Tkevv~~a 164 (358)
T 1dos_A 98 EHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLS-------E------ESLQENIEICSKYLERM 164 (358)
T ss_dssp HHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCT-------T------SCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCC-------C------CCHHHHHHHHHHHHHHH
Confidence 88899999999999542 12222332 2222356999999433 3 37788888888777766
Q ss_pred HhhCC----CeEEEEec-chhh---------cccHHHHHHHHHHhHhc--CCC---EEEe-----ccCC-------CHHH
Q 012815 219 KESGS----DIVIVART-DSRQ---------ALSLEESLRRSRAFADA--GAD---VLFI-----DALA-------SKEE 267 (456)
Q Consensus 219 ~~~G~----dfvIiART-DA~~---------~~~ldeAI~RakAy~eA--GAD---~Ifi-----e~~~-------s~ee 267 (456)
+..|. ++=.++-. |... -..- +.|+.|.+. |.| ++=+ ||+. +.+.
T Consensus 165 h~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~P----eea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~ 240 (358)
T 1dos_A 165 SKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQP----EDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCH----HHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHcCCEEEEEeccccCcCCCccccccccccccCCH----HHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHH
Confidence 54320 00011111 1100 0223 345566654 787 5542 2221 3455
Q ss_pred HHHHHHh------CCCCceeeeeeccCCCCCCCCHHHHH---hcCCCEEeccchHHHHHHHHHHHHHHH
Q 012815 268 MKAFCEI------SPLVPKMANMLEGGGKTPILNPLELE---ELGFKLVAYPLSLIGVSVRAMQDALTA 327 (456)
Q Consensus 268 i~~i~~~------v~~vP~~~N~~~~~g~tp~lt~~eL~---elGv~~Vs~p~~ll~aa~~A~~~~l~~ 327 (456)
++++.+. +|.+|+++ +++++. .++.++++ ++|+.-|=+..-+..+.+.++++.+..
T Consensus 241 L~~i~~~i~~~~g~~~~~vpL-VlHGgS---G~~~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~ 305 (358)
T 1dos_A 241 LRDSQEYVSKKHNLPHNSLNF-VFHGGS---GSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKA 305 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCE-EECSCT---TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcE-EEeCCC---CCCHHHHHHHHHCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 6666543 12223333 345422 35666655 699999999999999999999998754
No 377
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.76 E-value=3.9 Score=41.43 Aligned_cols=119 Identities=16% Similarity=0.154 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHH
Q 012815 167 VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRS 246 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~Ra 246 (456)
..+.++.++++|+++|.| +- +|. . | +...+.|+++++.. +++.|+.-+ ... .+.+
T Consensus 154 ~~~~a~~~~~~G~d~i~i-~~------~~g--~---~-~~~~e~i~~ir~~~----~~~pviv~~----v~~----~~~a 208 (404)
T 1eep_A 154 TIERVEELVKAHVDILVI-DS------AHG--H---S-TRIIELIKKIKTKY----PNLDLIAGN----IVT----KEAA 208 (404)
T ss_dssp HHHHHHHHHHTTCSEEEE-CC------SCC--S---S-HHHHHHHHHHHHHC----TTCEEEEEE----ECS----HHHH
T ss_pred HHHHHHHHHHCCCCEEEE-eC------CCC--C---h-HHHHHHHHHHHHHC----CCCeEEEcC----CCc----HHHH
Confidence 355567788999999998 32 231 1 2 34555565555442 144444311 112 2456
Q ss_pred HHhHhcCCCEEEe---------------ccCCCHHHHHHHHHhCC--CCceeeeeeccCCCCCCCCHHHHHhcCCCEEec
Q 012815 247 RAFADAGADVLFI---------------DALASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (456)
Q Consensus 247 kAy~eAGAD~Ifi---------------e~~~s~eei~~i~~~v~--~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~ 309 (456)
+...++|||.|.+ .+.+..+.+..+.+..+ .+|++.+ +|-...-...++-++|.+.|..
T Consensus 209 ~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~----GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 209 LDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIAD----GGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEE----SCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEE----CCCCCHHHHHHHHHcCCCHHhh
Confidence 7778999999998 22344444555554322 2666543 3432223456666799999999
Q ss_pred cchHH
Q 012815 310 PLSLI 314 (456)
Q Consensus 310 p~~ll 314 (456)
+..++
T Consensus 285 G~~~l 289 (404)
T 1eep_A 285 GNLFA 289 (404)
T ss_dssp CHHHH
T ss_pred CHHHh
Confidence 88764
No 378
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.72 E-value=11 Score=35.15 Aligned_cols=175 Identities=17% Similarity=0.050 Sum_probs=98.2
Q ss_pred HHHHHhCCCceeecccCChHH----HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEe
Q 012815 81 LRQILELPGVHQGPACFDALS----AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGD 156 (456)
Q Consensus 81 Lr~ll~~~~~lv~pgayDalS----Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD 156 (456)
+.+.+...+.+.+.-..|.-. ++.+-+.|++.+-+.- -+ .... +..+.+++... .+++.
T Consensus 9 ~~~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~----------k~---~~~~---~~i~~l~~~~~-~~~vg 71 (214)
T 1wbh_A 9 AESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTL----------RT---ECAV---DAIRAIAKEVP-EAIVG 71 (214)
T ss_dssp HHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEES----------CS---TTHH---HHHHHHHHHCT-TSEEE
T ss_pred HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeC----------CC---hhHH---HHHHHHHHHCc-CCEEe
Confidence 334455555555555555543 3444556888877661 01 1111 24455655553 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
+|.. -....++..+++||++||.- |. + .+ ..++++..|.++++=+.|
T Consensus 72 ----agtv-i~~d~~~~A~~aGAd~v~~p-~~--------d------~~--------v~~~~~~~g~~~i~G~~t----- 118 (214)
T 1wbh_A 72 ----AGTV-LNPQQLAEVTEAGAQFAISP-GL--------T------EP--------LLKAATEGTIPLIPGIST----- 118 (214)
T ss_dssp ----EESC-CSHHHHHHHHHHTCSCEEES-SC--------C------HH--------HHHHHHHSSSCEEEEESS-----
T ss_pred ----eCEE-EEHHHHHHHHHcCCCEEEcC-CC--------C------HH--------HHHHHHHhCCCEEEecCC-----
Confidence 3331 12366778889999999863 32 1 11 122233356666654333
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEe-ccCC--CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc-CCCEEeccch
Q 012815 237 LSLEESLRRSRAFADAGADVLFI-DALA--SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL-GFKLVAYPLS 312 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifi-e~~~--s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el-Gv~~Vs~p~~ 312 (456)
.+| +....++|||.|-+ ++.. ..+.++++.+.+|.+|++ ..||-++ -+..++.+. |+..|. +..
T Consensus 119 --~~e----~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~~ipvv----aiGGI~~-~n~~~~l~agg~~~v~-gS~ 186 (214)
T 1wbh_A 119 --VSE----LMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFC----PTGGISP-ANYRDYLALKSVLCIG-GSW 186 (214)
T ss_dssp --HHH----HHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEE----EBSSCCT-TTHHHHHTSTTBSCEE-EGG
T ss_pred --HHH----HHHHHHCCCCEEEEecCccccCHHHHHHHhhhCCCCeEE----EECCCCH-HHHHHHHhcCCCeEEE-ecc
Confidence 223 34445799998855 2222 357788888877656653 3456554 478999998 888888 776
Q ss_pred HHHHH
Q 012815 313 LIGVS 317 (456)
Q Consensus 313 ll~aa 317 (456)
+..+.
T Consensus 187 i~~~~ 191 (214)
T 1wbh_A 187 LVPAD 191 (214)
T ss_dssp GSCHH
T ss_pred ccChh
Confidence 65443
No 379
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=88.63 E-value=2.4 Score=41.27 Aligned_cols=164 Identities=20% Similarity=0.214 Sum_probs=104.2
Q ss_pred CCCCcccccccccCCCccccccccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCC
Q 012815 53 TNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGF 132 (456)
Q Consensus 53 ~~pr~~~~~R~y~~~s~~~~~a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~ 132 (456)
..||..|++-+.-.| ..-+.|+++++.- ..-.|.+=.++ +.++
T Consensus 8 ~KPR~~GlT~v~dkg--------lg~~~~~d~Le~~------------------g~yID~lKfg~-Gt~~---------- 50 (251)
T 1qwg_A 8 YEDFQRGLTVVLDKG--------LPPKFVEDYLKVC------------------GDYIDFVKFGW-GTSA---------- 50 (251)
T ss_dssp CCCCCCCCEEEEESS--------CCHHHHHHHHHHH------------------GGGCSEEEECT-TGGG----------
T ss_pred CCCcccCeeEEecCC--------CCHHHHHHHHHHh------------------hhhcceEEecC-ceee----------
Confidence 678988887664433 2244677766511 12267776663 4331
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEeCCCCCCCH--H------HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCH
Q 012815 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNA--M------NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSR 204 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~--~------nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ 204 (456)
+.-.+.+..--.+++..++++.- |+. + .+.+-++...+.|...|-|-|+.. -+|.
T Consensus 51 l~~~~~l~eki~l~~~~gV~v~~------GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i-----------~l~~ 113 (251)
T 1qwg_A 51 VIDRDVVKEKINYYKDWGIKVYP------GGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSS-----------DISL 113 (251)
T ss_dssp GSCHHHHHHHHHHHHTTTCEEEE------CHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSS-----------CCCH
T ss_pred ecCHHHHHHHHHHHHHcCCeEEC------CcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcc-----------cCCH
Confidence 23344555555667778888864 331 1 233445666679999999999751 2566
Q ss_pred HHHHHHHHHHHHHhHhhCCCeEEE---Eecch--hhcccHHHHHHHHHHhHhcCCCEEEeccCC--------------CH
Q 012815 205 EEAVMRIKAAVDARKESGSDIVIV---ARTDS--RQALSLEESLRRSRAFADAGADVLFIDALA--------------SK 265 (456)
Q Consensus 205 ee~v~kI~AA~~Ar~~~G~dfvIi---ARTDA--~~~~~ldeAI~RakAy~eAGAD~Ifie~~~--------------s~ 265 (456)
++.++-|+.+++. +|.+. +.-|. ....+.++.|+++++..+||||.|.+|+-. ..
T Consensus 114 ~~~~~~I~~~~~~------G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~ 187 (251)
T 1qwg_A 114 EERNNAIKRAKDN------GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKE 187 (251)
T ss_dssp HHHHHHHHHHHHT------TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCH
T ss_pred HHHHHHHHHHHHC------CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcH
Confidence 6655555544332 35554 44455 334578999999999999999999999852 24
Q ss_pred HHHHHHHHhCC
Q 012815 266 EEMKAFCEISP 276 (456)
Q Consensus 266 eei~~i~~~v~ 276 (456)
+++.++.+.++
T Consensus 188 d~v~~i~~~l~ 198 (251)
T 1qwg_A 188 NELDVLAKNVD 198 (251)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHhCC
Confidence 67888888775
No 380
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.62 E-value=5 Score=37.85 Aligned_cols=176 Identities=13% Similarity=0.025 Sum_probs=95.3
Q ss_pred HHHHHHhCCCceeecccCChH----HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 80 SLRQILELPGVHQGPACFDAL----SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDal----SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
.+.+.+...+.+.+.-..|.- -++.+-+.|++.+-+.- -+ . .-.+.++.+++... .+++
T Consensus 18 ~~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~----------k~---~---~~~~~i~~l~~~~~-~~~i 80 (225)
T 1mxs_A 18 RIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTL----------RS---Q---HGLKAIQVLREQRP-ELCV 80 (225)
T ss_dssp HHHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEES----------SS---T---HHHHHHHHHHHHCT-TSEE
T ss_pred HHHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEec----------CC---c---cHHHHHHHHHHhCc-ccEE
Confidence 344444444444433333443 23444556888877751 00 0 11223555555552 2222
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~ 235 (456)
|+|... ....++..+++||++||.- | .+ .+ ..++++..|.++++=+.|
T Consensus 81 ----gagtvl-~~d~~~~A~~aGAd~v~~p-~--------~d------~~--------v~~~~~~~g~~~i~G~~t---- 128 (225)
T 1mxs_A 81 ----GAGTVL-DRSMFAAVEAAGAQFVVTP-G--------IT------ED--------ILEAGVDSEIPLLPGIST---- 128 (225)
T ss_dssp ----EEECCC-SHHHHHHHHHHTCSSEECS-S--------CC------HH--------HHHHHHHCSSCEECEECS----
T ss_pred ----eeCeEe-eHHHHHHHHHCCCCEEEeC-C--------CC------HH--------HHHHHHHhCCCEEEeeCC----
Confidence 334321 2366778889999999852 2 11 11 122233346666653333
Q ss_pred cccHHHHHHHHHHhHhcCCCEEEecc---CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHh-cCCCEEeccc
Q 012815 236 ALSLEESLRRSRAFADAGADVLFIDA---LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEE-LGFKLVAYPL 311 (456)
Q Consensus 236 ~~~ldeAI~RakAy~eAGAD~Ifie~---~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~e-lGv~~Vs~p~ 311 (456)
.+| +....++|||.|-+.. +-..+.++++.+.+|.+|++ ..||-++ -+..++.+ .|+..|. +.
T Consensus 129 ---~~e----~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~~~~~~ipvv----aiGGI~~-~N~~~~l~~~Ga~~v~-gS 195 (225)
T 1mxs_A 129 ---PSE----IMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFC----PTGGVNP-ANVRNYMALPNVMCVG-TT 195 (225)
T ss_dssp ---HHH----HHHHHTTTCCEEEETTHHHHTHHHHHHHHHTTTTTCEEE----EBSSCCT-TTHHHHHHSTTBCCEE-EC
T ss_pred ---HHH----HHHHHHCCCCEEEEccCccccCHHHHHHHHhhCCCCeEE----EECCCCH-HHHHHHHhccCCEEEE-Ec
Confidence 223 3444589999885521 11345677777777655643 3456554 47899989 6999998 77
Q ss_pred hHHHHH
Q 012815 312 SLIGVS 317 (456)
Q Consensus 312 ~ll~aa 317 (456)
.++.+.
T Consensus 196 ai~~~~ 201 (225)
T 1mxs_A 196 WMLDSS 201 (225)
T ss_dssp TTSCHH
T ss_pred hhcCch
Confidence 776543
No 381
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=88.56 E-value=2.4 Score=40.74 Aligned_cols=172 Identities=12% Similarity=0.052 Sum_probs=96.3
Q ss_pred HHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 105 VEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 105 ~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
+.++|.|+|.++| ...++.+++.+.+++|.+ +++|++. ++. +++++ ..|++|+.+
T Consensus 32 ~~~~GtDaI~vGg------------s~gvt~~~~~~~v~~ik~-~~~Piil-~p~---~~~~~--------~~gaD~il~ 86 (235)
T 3w01_A 32 ICMSQTDAIMIGG------------TDDVTEDNVIHLMSKIRR-YPLPLVL-EIS---NIESV--------MPGFDFYFV 86 (235)
T ss_dssp HHTSSCSEEEECC------------SSCCCHHHHHHHHHHHTT-SCSCEEE-ECC---CSTTC--------CTTCSEEEE
T ss_pred HHHcCCCEEEECC------------cCCcCHHHHHHHHHHhcC-cCCCEEE-ecC---CHHHh--------hcCCCEEEE
Confidence 4578999999998 233699999999999998 8999998 332 33222 359999999
Q ss_pred CCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH-----h-hCCCeEEEEecchhh-------cccHHHHHHHHH-HhH
Q 012815 185 EDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK-----E-SGSDIVIVARTDSRQ-------ALSLEESLRRSR-AFA 250 (456)
Q Consensus 185 EDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~-----~-~G~dfvIiARTDA~~-------~~~ldeAI~Rak-Ay~ 250 (456)
=|=..-. . ...+-- . .++++++... + ....++|++-+-+.+ ....+++...|. |-.
T Consensus 87 pslln~~-~-----~~~i~g-~---~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~ 156 (235)
T 3w01_A 87 PTVLNST-D-----VAFHNG-T---LLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNH 156 (235)
T ss_dssp EEETTBS-S-----GGGTTH-H---HHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHH
T ss_pred ccccCCC-C-----cchhhh-H---HHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHH
Confidence 7643111 1 111110 1 1122333322 1 001233443321111 113444444443 222
Q ss_pred hcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 251 DAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 251 eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
=.|-..||+++- .+.+.++++.+..+.+|+.+ .+|=++| =..+++.+ |...|+.|+.+...
T Consensus 157 ~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~v---GfGI~~~-e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 157 MYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFY---GGGISSE-QQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp TTCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEEE---ESCCCSH-HHHHHHHT-TSSEEEECTHHHHC
T ss_pred HcCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEEE---ECCcCCH-HHHHHHHc-CCCEEEECCceecC
Confidence 237788888761 25677888887763356543 3322222 12355666 99999999987763
No 382
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=88.53 E-value=2.2 Score=43.03 Aligned_cols=90 Identities=20% Similarity=0.155 Sum_probs=57.7
Q ss_pred HHHHHHhC-CCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEe
Q 012815 80 SLRQILEL-PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGD 156 (456)
Q Consensus 80 ~Lr~ll~~-~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD 156 (456)
.++++.+. +.++++-++.+.-.|+.++++|+++|.+|+.+- . ..|.+ .+.-+ .+..+.+.+ ++|||+|
T Consensus 216 ~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~gg---r--~~~~~-~~~~~---~l~~v~~~~~~~ipvia~ 286 (370)
T 1gox_A 216 DVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGA---R--QLDYV-PATIM---ALEEVVKAAQGRIPVFLD 286 (370)
T ss_dssp HHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGG---T--SSTTC-CCHHH---HHHHHHHHTTTSSCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCC---c--cCCCc-ccHHH---HHHHHHHHhCCCCEEEEE
Confidence 34444432 456666688999999999999999999986441 1 12433 23323 334444555 6999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
. |..+..++. ++..+||++|.|
T Consensus 287 G--GI~~~~D~~----k~l~~GAdaV~i 308 (370)
T 1gox_A 287 G--GVRRGTDVF----KALALGAAGVFI 308 (370)
T ss_dssp S--SCCSHHHHH----HHHHHTCSEEEE
T ss_pred C--CCCCHHHHH----HHHHcCCCEEee
Confidence 3 233444444 444589999998
No 383
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=88.53 E-value=3.6 Score=40.82 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=74.6
Q ss_pred CCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
++++. ..+.+.++.+.+.|...+++--+ . .+.++-+++|++++++. |+++.| |.|+....+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg-------~------~~~~~d~~~v~avr~~~---g~~~~l--~vDaN~~~~ 200 (370)
T 2chr_A 139 ASGDTKRDLDSAVEMIERRRHNRFKVKLG-------F------RSPQDDLIHMEALSNSL---GSKAYL--RVDVNQAWD 200 (370)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCCEEEEECS-------S------SCHHHHHHHHHHHHHHT---TTTSEE--EEECTTCCC
T ss_pred ccCchhhhHHHHHHHHhhcccceeecccc-------c------CChHHHHHHHHHHHHhc---CCCcEE--EecCCCCCC
Confidence 44554 56777888888899999998432 1 13466677888877764 556544 348888888
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
.++|++.++++.+.+ ..|+|-+ .+.+.++++.+..+ +|+.+
T Consensus 201 ~~~A~~~~~~l~~~~--~~~iEeP~~~~d~~~~~~l~~~~~-ipIa~ 244 (370)
T 2chr_A 201 EQVASVYIPELEALG--VELIEQPVGRENTQALRRLSDNNR-VAIMA 244 (370)
T ss_dssp THHHHHHHHHHHTTT--CCEEECCSCSSCHHHHHHHHHHCS-SEEEE
T ss_pred HHHHHHHHHHHHhcC--CceecCCCChhhhhhhhHHhhhcc-CCccC
Confidence 999999999999874 5688864 36788999999877 67654
No 384
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=88.41 E-value=2.6 Score=41.63 Aligned_cols=134 Identities=13% Similarity=0.073 Sum_probs=82.1
Q ss_pred hHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHH---HhccCCcEEEeCC-CC--CC---CH-HHHH
Q 012815 99 ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLI---TQAVSIPVIGDGD-NG--YG---NA-MNVK 168 (456)
Q Consensus 99 alSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I---~ra~~iPVIaD~D-tG--YG---~~-~nv~ 168 (456)
..++..+-++|++++-+..+ +| +|. +-.+++..++++ |+..++|+++++- .| .+ ++ ..+.
T Consensus 111 ~~~ve~a~~~GAdaV~vlv~------~~-~d~---~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~ 180 (304)
T 1to3_A 111 KINAQAVKRDGAKALKLLVL------WR-SDE---DAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAII 180 (304)
T ss_dssp SCCHHHHHHTTCCEEEEEEE------EC-TTS---CHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHH
T ss_pred chhHHHHHHcCCCEEEEEEE------cC-CCc---cHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHH
Confidence 36778888899998876642 24 332 226666665555 5567899999873 23 22 24 6788
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRA 248 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakA 248 (456)
+.++.+.+.||+=++++-..++ . + +.+++.+.+++.... .+.++++++--. ..++.++..+.
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~-----~-g----~~~~~~~vv~~~~~~---~~~P~Vv~aGG~-----~~~~~~~~~~~ 242 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYG-----K-G----ARSDLLTASQRLNGH---INMPWVILSSGV-----DEKLFPRAVRV 242 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGG-----C-S----CHHHHHHHHHHHHHT---CCSCEEECCTTS-----CTTTHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCcCC-----C-C----CHHHHHHHHHhcccc---CCCCeEEEecCC-----CHHHHHHHHHH
Confidence 8899999999998888764321 1 1 445554443331111 134545555433 12445666777
Q ss_pred hHhcCCCEEEec
Q 012815 249 FADAGADVLFID 260 (456)
Q Consensus 249 y~eAGAD~Ifie 260 (456)
..++||+.+.+-
T Consensus 243 a~~aGa~Gv~vG 254 (304)
T 1to3_A 243 AMEAGASGFLAG 254 (304)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHcCCeEEEEe
Confidence 778999998863
No 385
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=88.27 E-value=3.2 Score=38.31 Aligned_cols=80 Identities=19% Similarity=0.170 Sum_probs=53.2
Q ss_pred CceeecccCChHHHHHHHHhCCcEE--EecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFC--FTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI--~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~n 166 (456)
+..++.++++.-.++.++++|+|.| .+.|..- ...+. .... +..++.+.+. ++||+++. |-.+.++
T Consensus 133 ~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~--~~~~~---~~~~----~~~i~~~~~~-~ipvia~G--GI~s~~~ 200 (234)
T 1yxy_A 133 NQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTP--YSRQE---AGPD----VALIEALCKA-GIAVIAEG--KIHSPEE 200 (234)
T ss_dssp TCEEEEECSSHHHHHHHHHTTCSEEECTTTTSST--TSCCS---SSCC----HHHHHHHHHT-TCCEEEES--CCCSHHH
T ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCC--CCcCC---CCCC----HHHHHHHHhC-CCCEEEEC--CCCCHHH
Confidence 5678889999999999999999999 3344321 11111 1122 3455666666 89999983 3334444
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012815 167 VKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (456)
++++.++||+++.+
T Consensus 201 ----~~~~~~~Gad~v~v 214 (234)
T 1yxy_A 201 ----AKKINDLGVAGIVV 214 (234)
T ss_dssp ----HHHHHTTCCSEEEE
T ss_pred ----HHHHHHCCCCEEEE
Confidence 45677789999988
No 386
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=88.25 E-value=0.9 Score=41.02 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=57.1
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG 157 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~ 157 (456)
...+++++ .+.++...+++...++.+.+.|++.+.+++.--+ .+.++....++ +..+.+++..++||+++.
T Consensus 99 ~~~~~~~~--~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~---~~~~~~~~~~~----~~l~~l~~~~~~pvia~G 169 (215)
T 1xi3_A 99 IEVAKEIA--PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT---KTKEDARVIGL----EGLRKIVESVKIPVVAIG 169 (215)
T ss_dssp HHHHHHHC--TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC-------CCCCCHH----HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHhC--CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccC---CCCCCCCCcCH----HHHHHHHHhCCCCEEEEC
Confidence 34566654 3466666788888888888899999998752111 12233222222 334556666689999972
Q ss_pred CCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 158 DNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 158 DtGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
|- +++| ++++.++|++||.+--
T Consensus 170 --GI-~~~n----v~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 170 --GI-NKDN----AREVLKTGVDGIAVIS 191 (215)
T ss_dssp --SC-CTTT----HHHHHTTTCSEEEESH
T ss_pred --Cc-CHHH----HHHHHHcCCCEEEEhH
Confidence 22 2444 4456678999998844
No 387
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=88.20 E-value=3.4 Score=42.83 Aligned_cols=98 Identities=20% Similarity=0.290 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++.| +.|+......++
T Consensus 182 ~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~~v~avRea~----pd~~L--~vDaN~~w~~~~ 242 (450)
T 3mzn_A 182 TPEAVANLARAAYDRYGFKDFKLKG-------GV------LRGEEEADCIRALHEAF----PEARL--ALDPNGAWKLDE 242 (450)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEE--EEECTTCBCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECC-------CC------CCHHHHHHHHHHHHHhC----CCCeE--EEECCCCCCHHH
Confidence 57788888888876 6999999932 22 13355678999888873 45443 468888888999
Q ss_pred HHHHHHHhHhcCCCEEEeccCC---C----HHHHHHHHHhCCCCceeee
Q 012815 242 SLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (456)
|++.++++.+. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 243 A~~~~~~L~~~---i~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 287 (450)
T 3mzn_A 243 AVRVLEPIKHL---LSYAEDPCGQEGGFSGRETMAEFKKRTG-LPTATN 287 (450)
T ss_dssp HHHHHGGGGGG---CSEEESSBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHHhhhc---cceeeCCCCcccccchHHHHHHHHHhcC-CCEEeC
Confidence 99999999875 55888752 2 467889998877 787765
No 388
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.19 E-value=5.7 Score=38.60 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=92.4
Q ss_pred ccccCCCcccccccc---HHHHHHHHHh--CCCceeecccCCh------HHHHHHHHhCCcEEEecchHHhhhhcccCCC
Q 012815 62 RVYRKNSTGVEACLS---PAKSLRQILE--LPGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALPDT 130 (456)
Q Consensus 62 R~y~~~s~~~~~a~~---~a~~Lr~ll~--~~~~lv~pgayDa------lSArl~e~aGfdAI~vSG~avSas~lG~PD~ 130 (456)
=.+.-||....+..+ +.+-++...+ .++..++.|+-.. --|+.++++|++++.+..- -.
T Consensus 37 gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P----------~y 106 (292)
T 2vc6_A 37 GLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP----------YY 106 (292)
T ss_dssp EEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC----------CS
T ss_pred EEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC----------CC
Confidence 345557766655322 2222333332 3344344454442 2356667789999987631 11
Q ss_pred CCCCHHHHHHHHHHHHhccCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHH
Q 012815 131 GFISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREE 206 (456)
Q Consensus 131 ~~lt~~Eml~~~r~I~ra~~iPVIa-D~D--tGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee 206 (456)
...+-+++.+|-+.|++++++||+. +.+ +|+. .++.+.+.+++. -.+.|||-... .
T Consensus 107 ~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgiK~s~g-------d----------- 166 (292)
T 2vc6_A 107 NKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDC--PNVKGVXDATG-------N----------- 166 (292)
T ss_dssp SCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEECSC-------C-----------
T ss_pred CCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhC--CCEEEEecCCC-------C-----------
Confidence 2237899999999999999999875 766 3543 344444443211 46888885332 1
Q ss_pred HHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHHHh
Q 012815 207 AVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFCEI 274 (456)
Q Consensus 207 ~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~~~ 274 (456)
..++...++.. +++|.|..=.|... ..+..+||+..+--. ---++.+.++.+.
T Consensus 167 -~~~~~~~~~~~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~~n~~P~~~~~l~~a 220 (292)
T 2vc6_A 167 -LLRPSLERMAC---GEDFNLLTGEDGTA-----------LGYMAHGGHGCISVTANVAPALCADFQQA 220 (292)
T ss_dssp -THHHHHHHHHS---CTTSEEEESCGGGH-----------HHHHHTTCCEEEESGGGTCHHHHHHHHHH
T ss_pred -HHHHHHHHHHc---CCCEEEEECchHHH-----------HHHHHcCCCEEEecHHHhCHHHHHHHHHH
Confidence 11333333222 35787775555532 223458999765422 1234566666554
No 389
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.15 E-value=6.1 Score=38.61 Aligned_cols=154 Identities=18% Similarity=0.122 Sum_probs=91.1
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
++.+.++|++.|=+++... .| ++ .+.++++.+.. +..+.+=.. .....+.+.++.+..+|+.
T Consensus 33 ~~~L~~~Gv~~IE~g~p~~------~~-------~d-~e~v~~i~~~~~~~~i~~l~~---~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 33 ALQLEKLGIDVIEAGFPIS------SP-------GD-FECVKAIAKAIKHCSVTGLAR---CVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp HHHHHHHTCSEEEEECGGG------CH-------HH-HHHHHHHHHHCCSSEEEEEEE---SSHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHcCCCEEEEeCCCC------Cc-------cH-HHHHHHHHHhcCCCEEEEEec---CCHHHHHHHHHHHhhcCCC
Confidence 4556789999998775321 12 11 12244444433 233332111 1234566666666678999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
-|+|-+..++- |...+-=.+.+|..++++.+++.+++.|..+.+.. .|+ ...+.+..++-++++.++|||.|.+.
T Consensus 96 ~v~i~~~~Sd~---~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~-~d~-~~~~~~~~~~~~~~~~~~G~~~i~l~ 170 (293)
T 3ewb_X 96 QIHIFLATSDV---HMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP-EDA-TRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp EEEEEEECSHH---HHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE-ETG-GGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEecCcHH---HHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe-ccC-CCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 99987765421 21111123678899999988887776664433322 232 23467788899999999999999885
Q ss_pred c---CCCHHHHHHHH----HhCCC
Q 012815 261 A---LASKEEMKAFC----EISPL 277 (456)
Q Consensus 261 ~---~~s~eei~~i~----~~v~~ 277 (456)
- .-+++++.++. +.+|.
T Consensus 171 DT~G~~~P~~v~~lv~~l~~~~~~ 194 (293)
T 3ewb_X 171 DTVGYTNPTEFGQLFQDLRREIKQ 194 (293)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 3 34555555444 45553
No 390
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=88.07 E-value=5.8 Score=40.20 Aligned_cols=154 Identities=11% Similarity=-0.016 Sum_probs=86.6
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCCCC--C----
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG--Y---- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~DtG--Y---- 161 (456)
-.|+.+.++|||+|=+- ||-+.-. ..-.-|.--=+++. +++.+++|+++++ -||.+.+-.. |
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 46778888999999874 3333211 01122321123433 3445666666664 2999986321 1
Q ss_pred -CC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 162 -GN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 162 -G~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|. .++..+.++.++++|++.|++-...... ...+. + .+++.+|+.+ .+..++.+++-+
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~---~~~~~---~-~~~~~~ik~~------~~iPvi~~Ggi~------- 309 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFNEPDWIG---GDITY---P-EGFREQMRQR------FKGGLIYCGNYD------- 309 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC---------CC---C-TTHHHHHHHH------CCSEEEEESSCC-------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccC---CCCcc---h-HHHHHHHHHH------CCCCEEEECCCC-------
Confidence 23 3578888999999999999996543110 00111 1 2344444332 223455555542
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.++.+.+.| ||+|.+-- +.+++..+++.+..+
T Consensus 310 ---~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~ 346 (377)
T 2r14_A 310 ---AGRAQARLDDNTADAVAFGRPFIANPDLPERFRLGAA 346 (377)
T ss_dssp ---HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ---HHHHHHHHHCCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 24566677787 99998843 445567777776543
No 391
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=88.04 E-value=3.4 Score=41.35 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|-+...+.+.++++++.||+-|=|-.+. --.| +-++.+|-++|+.-++++-.+.-++..|-- |....
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeS------TrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT~~~---- 127 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVK------AGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISV--DTWRA---- 127 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC-----------------CHHHHHHHHHHHHHHHHHHSTTCEEEE--ECSCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCc------CCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eCCCH----
Confidence 4455678888899999999999886542 1134 557777777777655555433212444433 44432
Q ss_pred HHHHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+ -+++..++|||+|- +.+..+ +++..++++.. .|+.+
T Consensus 128 ~---VaeaAl~aGa~iINDVsg~~d-~~m~~vaa~~g-~~vVl 165 (318)
T 2vp8_A 128 Q---VAKAACAAGADLINDTWGGVD-PAMPEVAAEFG-AGLVC 165 (318)
T ss_dssp H---HHHHHHHHTCCEEEETTSSSS-TTHHHHHHHHT-CEEEE
T ss_pred H---HHHHHHHhCCCEEEECCCCCc-hHHHHHHHHhC-CCEEE
Confidence 1 23344456999885 444444 46667777665 56543
No 392
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=88.00 E-value=6.4 Score=38.57 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|.+...+.+.++++++.||+-|-|-... --+|..-++.+|=.+|+.-++++-.+. .++.|-- |+...
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGges------trPga~~v~~~eE~~rv~pvi~~l~~~-~~~piSI--DT~~~---- 100 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGES------TRPGAAEVSVEEELQRVIPVVEAIAQR-FEVWISV--DTSKP---- 100 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSC------CSTTCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEE--ECCCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCc------CCCCCCcCCHHHHHHHHHHHHHHHHhh-cCCeEEE--eCCCH----
Confidence 4456778888999999999999986642 112334566666666666666554432 2444433 44432
Q ss_pred HHHHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+=+++..++|||+|- +.+..+ +++..++++.. .|+.+
T Consensus 101 ---~va~aAl~aGa~iINdvsg~~d-~~~~~~~a~~~-~~vVl 138 (282)
T 1aj0_A 101 ---EVIRESAKVGAHIINDIRSLSE-PGALEAAAETG-LPVCL 138 (282)
T ss_dssp ---HHHHHHHHTTCCEEEETTTTCS-TTHHHHHHHHT-CCEEE
T ss_pred ---HHHHHHHHcCCCEEEECCCCCC-HHHHHHHHHhC-CeEEE
Confidence 224444556999996 344434 46666666655 56544
No 393
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.95 E-value=4.2 Score=43.59 Aligned_cols=156 Identities=16% Similarity=0.088 Sum_probs=84.0
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhcc--CCcEEE-----eCC-CC
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAV--SIPVIG-----DGD-NG 160 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~--~iPVIa-----D~D-tG 160 (456)
-.|+.+.++|||+|=+- ||-+.-. ..-..|.---+++. +++.+++|++++ +.||.+ |.- .|
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g 224 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG 224 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC
Confidence 46788888999999874 3322210 01122321123443 455666777777 688876 552 24
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCC----CCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILED----QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IED----q~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
+ +..+..+.++.++++|++.|++-. +..|...... + +. ..-+++++|+. + .+..++.+++-..
T Consensus 225 ~-~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~i~~---~---~~iPvi~~Ggi~~--- 291 (671)
T 1ps9_A 225 G-TFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPV-P-RG-AFSWVTRKLKG---H---VSLPLVTTNRIND--- 291 (671)
T ss_dssp C-CHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTS-C-TT-TTHHHHHHHTT---S---CSSCEEECSSCCS---
T ss_pred C-CHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccC-C-cc-hHHHHHHHHHH---h---cCceEEEeCCCCC---
Confidence 3 456788889999999999999832 1111100000 0 00 11133334332 2 2345555555322
Q ss_pred ccHHHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHh
Q 012815 237 LSLEESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEI 274 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~ 274 (456)
.+.+..+.+.| ||+|.+-. +.+++..+++.+.
T Consensus 292 ------~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g 326 (671)
T 1ps9_A 292 ------PQVADDILSRGDADMVSMARPFLADAELLSKAQSG 326 (671)
T ss_dssp ------HHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTT
T ss_pred ------HHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcC
Confidence 14455666777 99998743 3444566666643
No 394
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=87.86 E-value=3.3 Score=41.78 Aligned_cols=125 Identities=18% Similarity=0.225 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
|.+++....+.++++.+.|...+||-= |. -+.++-+++|++++++. +++.+. .|+......
T Consensus 145 ~~~~~~~~~~~a~~~~~~G~~~~K~Kv-------g~------~~~~~d~~~v~avR~a~----~~~~l~--vDan~~~~~ 205 (385)
T 3i6e_A 145 ANPDFDADIALMERLRADGVGLIKLKT-------GF------RDHAFDIMRLELIARDF----PEFRVR--VDYNQGLEI 205 (385)
T ss_dssp CCSSHHHHHHHHHHHHHHTCCEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEEE--EECTTCCCG
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEec-------CC------CCHHHHHHHHHHHHHhC----CCCeEE--EECCCCCCH
Confidence 456777777788888888999999832 21 13456688999888775 244433 377777778
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHH---HhcC-CCEEeccch
Q 012815 240 EESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLEL---EELG-FKLVAYPLS 312 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL---~elG-v~~Vs~p~~ 312 (456)
++|++.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+..++ -+.| +..|..-..
T Consensus 206 ~~A~~~~~~L~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 206 DEAVPRVLDVAQFQPD--FIEQPVRAHHFELMARLRGLTD-VPLLAD-----ES--VYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp GGHHHHHHHHHTTCCS--CEECCSCTTCHHHHHHHHTTCS-SCEEES-----TT--CCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHHHhcCCC--EEECCCCcccHHHHHHHHHhCC-CCEEEe-----CC--cCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999998755 56653 25778888888876 777653 11 2355444 4445 666655444
Q ss_pred H
Q 012815 313 L 313 (456)
Q Consensus 313 l 313 (456)
-
T Consensus 276 ~ 276 (385)
T 3i6e_A 276 K 276 (385)
T ss_dssp H
T ss_pred c
Confidence 3
No 395
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=87.76 E-value=7.1 Score=36.67 Aligned_cols=155 Identities=11% Similarity=-0.051 Sum_probs=94.5
Q ss_pred HHHHhccCCcEEEeCCCCCCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 143 QLITQAVSIPVIGDGDNGYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 143 r~I~ra~~iPVIaD~DtGYG~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
+.+.+..+.||+.|.=.+ +. ..+...++.+.+. ++.+++---. |. .. + ++++ +.
T Consensus 43 ~~L~~~~g~~VflDlK~~--DIpnTv~~a~~~~~~~-ad~vTvh~~~-----G~---~~------~---~~~~-~~---- 97 (215)
T 3ve9_A 43 KELVGLVDGIKILDLKLA--DIDNTMILIVDELKDI-TNSFIAHAFV-----GV---EG------S---LASL-SQ---- 97 (215)
T ss_dssp HHHHTTCCSEEEEEEEEC--SCHHHHHHHHHHHTTT-CSEEEEEGGG-----CT---TT------T---HHHH-HH----
T ss_pred HHHHHhcCCcEEEEeccc--CchhHHHHHHHHHHHh-hheEEEeCCC-----Cc---HH------H---HHhH-hc----
Confidence 445443489999998765 53 4466677888888 9999883321 10 11 1 1122 11
Q ss_pred CCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCC-CCCHHHHH
Q 012815 222 GSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTP-ILNPLELE 300 (456)
Q Consensus 222 G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp-~lt~~eL~ 300 (456)
+..+++...++..... -+-..++++...++|.|.+++.+. ..++++++.+..+. ++-+. ||-.| .-++++..
T Consensus 98 ~~~v~vLts~s~~~~~-~~~v~~~a~~a~~~G~~GvV~sat-~~~e~~~ir~~~~~---f~~v~--pGI~~~g~~~~~a~ 170 (215)
T 3ve9_A 98 RVDLFLVLSMSHPGWN-DAFYPYLREVARRVNPKGFVAPAT-RPSMISRVKGDFPD---KLVIS--PGVGTQGAKPGIAL 170 (215)
T ss_dssp HSEEEEECCCSSTTCC-GGGHHHHHHHHHHHCCSEEECCTT-SHHHHHHHHHHCTT---SEEEE--CCTTSTTCCTTHHH
T ss_pred CCCEEEEEecCCcchH-HHHHHHHHHHHHHcCCCceeeCCC-CHHHHHHHHHhCCC---cEEEc--CCCCcCcCCHHHHH
Confidence 2346676776654311 123566777788999999887543 35788888887763 22222 33333 23677888
Q ss_pred hcCCCEEeccchHHHHH--HHHHHHHHHHHH
Q 012815 301 ELGFKLVAYPLSLIGVS--VRAMQDALTAIK 329 (456)
Q Consensus 301 elGv~~Vs~p~~ll~aa--~~A~~~~l~~i~ 329 (456)
+.|.+.++.|-..+.+. ..+++...++|.
T Consensus 171 ~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~ 201 (215)
T 3ve9_A 171 CHGADYEIVGRSVYQSADPVRKLEEIVRSQE 201 (215)
T ss_dssp HTTCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCHHHcCCCCHHHHHHHHHHHHH
Confidence 99999999998877652 444444444443
No 396
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=87.74 E-value=14 Score=34.47 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=79.4
Q ss_pred HHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 142 GQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 142 ~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
++.|.+.. +.+|+.|.=.. -.+..+.+. +.++||+.+.+-... | .+ -+++++++.++
T Consensus 49 v~~l~~~~p~~~iflDlKl~-Dip~t~~~~---~~~~Gad~vtVH~~~---------g------~~---~l~~a~~~~~~ 106 (221)
T 3exr_A 49 VEVLRSLFPDKIIVADTKCA-DAGGTVAKN---NAVRGADWMTCICSA---------T------IP---TMKAARKAIED 106 (221)
T ss_dssp HHHHHHHCTTSEEEEEEEEC-SCHHHHHHH---HHTTTCSEEEEETTS---------C------HH---HHHHHHHHHHH
T ss_pred HHHHHHhCCCCcEEEEEEee-ccHHHHHHH---HHHcCCCEEEEeccC---------C------HH---HHHHHHHHHHh
Confidence 45555544 67899998776 234445543 678999997763221 1 12 24445555444
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec--------c-CCCHHHHHHHHHhCC-CCceeeeeeccCCC
Q 012815 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID--------A-LASKEEMKAFCEISP-LVPKMANMLEGGGK 290 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie--------~-~~s~eei~~i~~~v~-~vP~~~N~~~~~g~ 290 (456)
.|.+-.+++=|=- ...+ .++++.+.+.|.|-++++ + +.+.++++.+.+... ..+ +-+ .||-
T Consensus 107 ~g~~~~~~~Vt~l-ts~~----~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~--i~v--~gGI 177 (221)
T 3exr_A 107 INPDKGEIQVELY-GDWT----YDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFR--VSV--TGGL 177 (221)
T ss_dssp HCTTTCEEEEECC-SSCC----HHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCE--EEE--ESSC
T ss_pred cCCCcceEEEEEc-CCCC----HHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCce--EEE--ECCC
Confidence 3422223332211 1112 244556677888766653 2 245667777766432 122 222 2454
Q ss_pred CCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 291 TPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 291 tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
.| -+..++.+.|.+.++.|...+.+
T Consensus 178 ~~-~~~~~~~~aGad~~VvG~~I~~a 202 (221)
T 3exr_A 178 SV-DTLKLFEGVDVFTFIAGRGITEA 202 (221)
T ss_dssp CG-GGGGGGTTCCCSEEEECHHHHTS
T ss_pred CH-HHHHHHHHCCCCEEEECchhhCC
Confidence 44 25678999999999999877653
No 397
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=87.68 E-value=12 Score=38.14 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHh-CccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 164 AMNVKRTVKGYIKA-GFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 164 ~~nv~rtVk~l~~A-GaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
++.+.+.++++.+. |...+||-= | .+.++-+++|++++++. +++.+. .|+......++|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~Kv-------G-------~~~~~d~~~v~avR~~~----~~~~l~--vDaN~~w~~~~A 228 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKG-------T-------TDCAGDVAILRAVREAL----PGVNLR--VDPNAAWSVPDS 228 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEC-------C-------SCHHHHHHHHHHHHHHC----TTSEEE--EECTTCSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEec-------C-------CCHHHHHHHHHHHHHhC----CCCeEE--eeCCCCCCHHHH
Confidence 47788888888888 999999831 2 13466688999988876 244332 378777889999
Q ss_pred HHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcC-CCEEeccchHH
Q 012815 243 LRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELG-FKLVAYPLSLI 314 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elG-v~~Vs~p~~ll 314 (456)
++.++++.+.|.+ |+|-+ ++.+.++++.+..+ +|+... |. .+......++-+.| +..|..-..-.
T Consensus 229 ~~~~~~l~~~~i~--~iEqP~~d~~~~~~l~~~~~-iPIa~d--E~--~~~~~~~~~~i~~~a~d~v~~k~~~~ 295 (398)
T 4dye_A 229 VRAGIALEELDLE--YLEDPCVGIEGMAQVKAKVR-IPLCTN--MC--VVRFEDFAPAMRLNAVDVIHGDVYKW 295 (398)
T ss_dssp HHHHHHHGGGCCS--EEECCSSHHHHHHHHHHHCC-SCEEES--SS--CCSGGGHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHhhcCCC--EEcCCCCCHHHHHHHHhhCC-CCEEeC--Cc--CCCHHHHHHHHHhCCCCEEEeCcccc
Confidence 9999999998644 66653 47778889988877 776643 11 11112345555556 66666554443
No 398
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=87.59 E-value=2.1 Score=41.55 Aligned_cols=166 Identities=16% Similarity=0.167 Sum_probs=98.2
Q ss_pred HHHhCCcEEEec-chHHhhhhcccCCCC------------CCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHH---HHH
Q 012815 105 VEKSGFSFCFTS-GFSISAARLALPDTG------------FISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAM---NVK 168 (456)
Q Consensus 105 ~e~aGfdAI~vS-G~avSas~lG~PD~~------------~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~---nv~ 168 (456)
++++|.|.|=++ -+. -.+.|+- .++++..++.++.++.. +|++. .||-|+. .+.
T Consensus 37 l~~~GaD~iElGiPfS-----DP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pivl---m~Y~N~i~~~G~e 106 (252)
T 3tha_A 37 LDQSPIDILELGVAYS-----DPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KALVF---MVYYNLIFSYGLE 106 (252)
T ss_dssp GGGSSCSEEEEECCCS-----CCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEEEE---ECCHHHHHHHCHH
T ss_pred HHHcCCCEEEECCCCC-----CCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCEEE---EeccCHHHHhhHH
Confidence 456788888776 221 1222321 36788888888888654 79876 4787863 266
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCe-EEEEecchhhcccHHHHHHHHH
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDI-VIVARTDSRQALSLEESLRRSR 247 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~df-vIiARTDA~~~~~ldeAI~Rak 247 (456)
+-+++..++|++|+.|=|= |.||..+-.+++.+ .|-++ ++++=|.. .+|.+
T Consensus 107 ~F~~~~~~aGvdG~IipDL---------------P~eE~~~~~~~~~~----~Gl~~I~lvaP~t~---------~eRi~ 158 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPEL---------------SFEESDDLIKECER----YNIALITLVSVTTP---------KERVK 158 (252)
T ss_dssp HHHHHHHHTTEEEEECTTC---------------CGGGCHHHHHHHHH----TTCEECEEEETTSC---------HHHHH
T ss_pred HHHHHHHHcCCCEEEeCCC---------------CHHHHHHHHHHHHH----cCCeEEEEeCCCCc---------HHHHH
Confidence 7889999999999999883 33443332223322 24333 33444432 27888
Q ss_pred HhHhcCCCEEEeccC------CC------HHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhc--CCCEEeccchH
Q 012815 248 AFADAGADVLFIDAL------AS------KEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEEL--GFKLVAYPLSL 313 (456)
Q Consensus 248 Ay~eAGAD~Ifie~~------~s------~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~el--Gv~~Vs~p~~l 313 (456)
...+.+-..||+.+. .+ .+.++++.+... +|+.+ .+ |- -+.++.+++ +..-|+.|+.+
T Consensus 159 ~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v---Gf-GI---st~e~a~~~~~~ADGVIVGSAi 230 (252)
T 3tha_A 159 KLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTN-LPIFV---GF-GI---QNNQDVKRMRKVADGVIVGTSI 230 (252)
T ss_dssp HHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC-SCEEE---ES-SC---CSHHHHHHHTTTSSEEEECHHH
T ss_pred HHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcC-CcEEE---Ec-Cc---CCHHHHHHHHhcCCEEEECHHH
Confidence 888887777776542 11 123344444433 67654 22 32 144443332 48999999977
Q ss_pred HHH
Q 012815 314 IGV 316 (456)
Q Consensus 314 l~a 316 (456)
...
T Consensus 231 Vk~ 233 (252)
T 3tha_A 231 VKC 233 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 399
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=87.58 E-value=1.5 Score=43.50 Aligned_cols=115 Identities=15% Similarity=0.091 Sum_probs=76.3
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchH------------------Hhhhhccc-CCCCCCCHH-H---HHHHHHHH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFS------------------ISAARLAL-PDTGFISYG-E---MVDQGQLI 145 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~a------------------vSas~lG~-PD~~~lt~~-E---ml~~~r~I 145 (456)
+...|.+|.|---|.-..+.|++.|-+.|.+ +- ...|| .+-.++++. + =.+.++++
T Consensus 115 ~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~-~l~g~~t~~el~~~a~~~~ad~elI~~I 193 (291)
T 3o07_A 115 KVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIK-ACQQLKSEDDIAKVAEEMRVPVSLLKDV 193 (291)
T ss_dssp SSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHH-HHHTCCCHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHH-HHHcCCCHHHhhhcccccCCCHHHHHHH
Confidence 3467789999999999999999999998541 00 02245 332222221 0 02456677
Q ss_pred HhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHh
Q 012815 146 TQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 146 ~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
.+..++||++.++.|..++.++.+ +.++|++||.+=-..+ . --++..+++++..+....
T Consensus 194 ke~~~IPVV~IAnGGI~TpedA~~----~le~GaDGVmVGrAI~----~------s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 194 LEKGKLPVVNFAAGGVATPADAAL----LMQLGCDGVFVGSGIF----K------SSNPVRLATAVVEATTHF 252 (291)
T ss_dssp HHHTSCSSCEEBCSSCCSHHHHHH----HHHTTCSCEEECGGGG----G------SSCHHHHHHHHHHHHHTT
T ss_pred HHccCCCEEEecCCCCCCHHHHHH----HHHhCCCEEEEchHHh----C------CCCHHHHHHHHHHHHHhc
Confidence 777889999999999888777664 3378999999944431 0 113567777777776554
No 400
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.51 E-value=1.3 Score=45.17 Aligned_cols=86 Identities=17% Similarity=0.173 Sum_probs=52.9
Q ss_pred CCceeeccc---CChHHHHHHHHhCCcEEEecchH-Hhhh---------hcccCCCCCCCHHHHHHHHHHHHhcc--CCc
Q 012815 88 PGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFS-ISAA---------RLALPDTGFISYGEMVDQGQLITQAV--SIP 152 (456)
Q Consensus 88 ~~~lv~pga---yDalSArl~e~aGfdAI~vSG~a-vSas---------~lG~PD~~~lt~~Eml~~~r~I~ra~--~iP 152 (456)
+.|+++=++ .+.-.|+.++++|+|+|.+++.+ ...+ ..+..|.+ ++..+.+..+ +.+ ++|
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g-~pt~~~L~~v----~~~~~~ip 280 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWG-QTTAQVLLNA----QPLMDKVE 280 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCS-CBHHHHHHHH----GGGTTTSE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhcccccccccccccc-ccHHHHHHHH----HHhcCCCe
Confidence 567777777 78889999999999999998542 1110 01122444 3333433332 333 699
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 153 VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
||+|. |.-+..++. | ++.+||++|.|
T Consensus 281 via~G--GI~~g~Dv~---K-aLalGAdaV~i 306 (365)
T 3sr7_A 281 ILASG--GIRHPLDII---K-ALVLGAKAVGL 306 (365)
T ss_dssp EEECS--SCCSHHHHH---H-HHHHTCSEEEE
T ss_pred EEEeC--CCCCHHHHH---H-HHHcCCCEEEE
Confidence 99973 344554554 3 33489999998
No 401
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.50 E-value=5.2 Score=38.31 Aligned_cols=171 Identities=16% Similarity=0.110 Sum_probs=97.9
Q ss_pred HhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 107 KSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 107 ~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
+.||.+|++...-+.... -+.+.+ +.+-.++++|.|......-...++..++.||+-|-+==
T Consensus 40 ~~~~~aVcV~p~~v~~a~-~l~~~~-----------------v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVi 101 (231)
T 3ndo_A 40 DLGVFAVCVSPPLVSVAA-GVAPSG-----------------LAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVI 101 (231)
T ss_dssp HHTCSEEEECGGGHHHHH-HHCCTT-----------------CEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HhCCcEEEECHHHHHHHH-HhcCCC-----------------CeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 469999999843333211 111111 23445678998876665545566788889999885422
Q ss_pred CCCCCCccCC-CCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh-cccHHHHHHHHHHhHhcCCCEEEec----
Q 012815 187 QVSPKGCGHT-RGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ-ALSLEESLRRSRAFADAGADVLFID---- 260 (456)
Q Consensus 187 q~~pK~CGH~-~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~-~~~ldeAI~RakAy~eAGAD~Ifie---- 260 (456)
.. |.. .| ..+.+.+-|++.+++.. +..+.+|-=|..+. ...-++.+.-++...++|||.|=--
T Consensus 102 ni-----g~lk~g----~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 102 DV-----GAALAG----DLDAVSADITAVRKAVR--AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CH-----HHHHTT----CHHHHHHHHHHHHHHTT--TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred eh-----Hhhhcc----cHHHHHHHHHHHHHHcc--CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 11 110 01 23567788888888875 23455554443330 1134566666788889999999542
Q ss_pred --cCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEec
Q 012815 261 --ALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAY 309 (456)
Q Consensus 261 --~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~ 309 (456)
+-.+.+.++.+.+.+.. ++.+- ..||-...-...++-++|..|+-.
T Consensus 171 ~~~gAt~edv~lm~~~v~~-~v~VK--aaGGIrt~~~a~~~i~aGa~RiGt 218 (231)
T 3ndo_A 171 PSGGASVQAVEIMARTVGE-RLGVK--ASGGIRTAEQAAAMLDAGATRLGL 218 (231)
T ss_dssp TTCSCCHHHHHHHHHHHTT-TSEEE--EESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCHHHHHHHHHHhCC-CceEE--EeCCCCCHHHHHHHHHhcchhccc
Confidence 33456666666665541 33222 223321112346677899998754
No 402
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=87.42 E-value=4 Score=41.40 Aligned_cols=110 Identities=14% Similarity=0.086 Sum_probs=74.5
Q ss_pred CCCHHHHHHHHHHHHhc---cCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHH
Q 012815 132 FISYGEMVDQGQLITQA---VSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (456)
Q Consensus 132 ~lt~~Eml~~~r~I~ra---~~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~ 207 (456)
..|.+|.++.+..+++. ....|..++++++- ++..+.+.++.++++||.-|.|-|.. | +..++++
T Consensus 120 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~~ 188 (370)
T 3rmj_A 120 KMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTV-----G------YSIPYKT 188 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSS-----S------CCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCcc-----C------CcCHHHH
Confidence 46899999887766543 35778889988754 67889999999999999999999986 3 3345677
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
.+.|++.++..... .+..|-..+= .++.-|+.=+.+..+|||+.|
T Consensus 189 ~~lv~~l~~~~~~~-~~~~l~~H~H----nd~GlAvAN~laAv~aGa~~v 233 (370)
T 3rmj_A 189 EEFFRELIAKTPNG-GKVVWSAHCH----NDLGLAVANSLAALKGGARQV 233 (370)
T ss_dssp HHHHHHHHHHSTTG-GGSEEEEECB----CTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCc-CceEEEEEeC----CCCChHHHHHHHHHHhCCCEE
Confidence 77777776553210 0122222221 112234666777788999976
No 403
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=87.41 E-value=7.3 Score=36.69 Aligned_cols=166 Identities=11% Similarity=0.095 Sum_probs=90.5
Q ss_pred HHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhc--cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCc
Q 012815 103 KLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQA--VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGF 179 (456)
Q Consensus 103 rl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra--~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGa 179 (456)
+.++++|.+.+.+= .-+ +=.|.. ++. ...++.|.+. .++|+-+++= .-++ .+.++.+.++||
T Consensus 24 ~~l~~~g~d~~h~DVmDg-----~Fvpn~---~~G--~~~v~~ir~~~~~~~~~dvhLm--v~~p---~~~i~~~~~aGa 88 (228)
T 3ovp_A 24 LRMLDSGADYLHLDVMDG-----HFVPNI---TFG--HPVVESLRKQLGQDPFFDMHMM--VSKP---EQWVKPMAVAGA 88 (228)
T ss_dssp HHHHHTTCSCEEEEEEBS-----SSSSCB---CBC--HHHHHHHHHHHCSSSCEEEEEE--CSCG---GGGHHHHHHHTC
T ss_pred HHHHHcCCCEEEEEecCC-----CcCccc---ccC--HHHHHHHHHhhCCCCcEEEEEE--eCCH---HHHHHHHHHcCC
Confidence 45667788877763 100 002332 222 1245566655 4678755432 3344 345678889999
Q ss_pred cEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe
Q 012815 180 AGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (456)
Q Consensus 180 aGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi 259 (456)
+.|++-... |-| ..+.+ +++++. |....|.-.+... +++.+.|.+. +|.|++
T Consensus 89 d~itvH~Ea----~~~--------~~~~i---~~i~~~----G~k~gval~p~t~--------~e~l~~~l~~-~D~Vl~ 140 (228)
T 3ovp_A 89 NQYTFHLEA----TEN--------PGALI---KDIREN----GMKVGLAIKPGTS--------VEYLAPWANQ-IDMALV 140 (228)
T ss_dssp SEEEEEGGG----CSC--------HHHHH---HHHHHT----TCEEEEEECTTSC--------GGGTGGGGGG-CSEEEE
T ss_pred CEEEEccCC----chh--------HHHHH---HHHHHc----CCCEEEEEcCCCC--------HHHHHHHhcc-CCeEEE
Confidence 999984321 111 22333 333333 3222332222211 2344455553 898876
Q ss_pred ccC-----------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 260 DAL-----------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 260 e~~-----------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
-++ ...+.++++.+..+.+|+. + .||-+| -+..++.+.|++.++.|...+.+
T Consensus 141 msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~---V-dGGI~~-~t~~~~~~aGAd~~VvGsaIf~a 203 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIE---V-DGGVGP-DTVHKCAEAGANMIVSGSAIMRS 203 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEE---E-ESSCST-TTHHHHHHHTCCEEEESHHHHTC
T ss_pred eeecCCCCCcccCHHHHHHHHHHHHhcCCCCEE---E-eCCcCH-HHHHHHHHcCCCEEEEeHHHhCC
Confidence 433 2345677777765433332 2 245544 68899999999999999877653
No 404
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=87.29 E-value=4.1 Score=39.88 Aligned_cols=110 Identities=17% Similarity=0.098 Sum_probs=73.5
Q ss_pred CCCHHHHHHHHHHHHh---ccCCcEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHH
Q 012815 132 FISYGEMVDQGQLITQ---AVSIPVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEA 207 (456)
Q Consensus 132 ~lt~~Eml~~~r~I~r---a~~iPVIaD~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~ 207 (456)
..|.+|.++.++.+.+ ..+..|.+++++++- ++..+.+.++.+.++|+.-|.|-|.. | +..++++
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~-----G------~~~P~~v 181 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTV-----G------YTNPTEF 181 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSS-----S------CCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCC-----C------CCCHHHH
Confidence 4689998888777654 346788888887643 67789999999999999999999986 2 3345667
Q ss_pred HHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 208 VMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 208 v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
.+.|++.++..... ++..|-.-+=. .+--|+.-+.+..+|||+.|
T Consensus 182 ~~lv~~l~~~~~~~-~~~~l~~H~Hn----d~Gla~AN~laA~~aGa~~v 226 (293)
T 3ewb_X 182 GQLFQDLRREIKQF-DDIIFASHCHD----DLGMATANALAAIENGARRV 226 (293)
T ss_dssp HHHHHHHHHHCTTG-GGSEEEEECBC----TTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCc-cCceEEEEeCC----CcChHHHHHHHHHHhCCCEE
Confidence 77777776553210 01223222211 11234566777789999954
No 405
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=87.16 E-value=4.6 Score=40.26 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHH
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~ 244 (456)
.+..+.++.+.+.|...+++--+ + +.++-+++|++++++. |+++-| |.|+......++|++
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~g-------~-------~~~~di~~v~avr~~~---g~~~~l--~vDaN~~~~~~~A~~ 206 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKIG-------F-------GVEEDLRVIAAVREAI---GPDMRL--MIDANHGYTVTEAIT 206 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC-------S-------CHHHHHHHHHHHHHHH---TTTSEE--EEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHhccceeccccc-------C-------ChHHHHHHHHHHHHhc---CCcEEE--EEecCcccCHHHHHH
Confidence 44555556666789999988432 1 3566788888887775 566554 458888889999999
Q ss_pred HHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+.+
T Consensus 207 ~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~ 244 (378)
T 4hpn_A 207 LGDRAAGFG--IDWFEEPVVPEQLDAYARVRAGQP-IPVAG 244 (378)
T ss_dssp HHHHHGGGC--CSCEECCSCTTCHHHHHHHHHHSS-SCEEE
T ss_pred HHhhhhhcc--cchhhcCCCccchhhhHHHHhhCC-ceeeC
Confidence 999999885 5578864 46788999999887 77653
No 406
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=87.09 E-value=28 Score=35.35 Aligned_cols=233 Identities=12% Similarity=-0.004 Sum_probs=131.3
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCC--CCCCHHHHHHHHHHHHhcc
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDT--GFISYGEMVDQGQLITQAV 149 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~--~~lt~~Eml~~~r~I~ra~ 149 (456)
.-.+-|....+.+--+.+.|+++.-+++.+ ++.+.+.|.-.|-+.+...-|.+-. ..+..-.+..+++.+++..
T Consensus 19 ~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~ 98 (357)
T 3qm3_A 19 ELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAY 98 (357)
T ss_dssp GHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHC
Confidence 444455555555656889999998888765 5668888876543322211232110 0111123455677788888
Q ss_pred CCcEEEeCCCCCCCH----HHHHHH----HHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhh
Q 012815 150 SIPVIGDGDNGYGNA----MNVKRT----VKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKES 221 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~----~nv~rt----Vk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~ 221 (456)
++||..=.|+|.-.. ..+.+. +++.+++|...|.| |.. | .|.||=+++-+..++-++..
T Consensus 99 ~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMi-DgS------~------lp~eENI~~Tk~vv~~ah~~ 165 (357)
T 3qm3_A 99 GVPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHML-DLS------E------ESLEENLSTCEVYLQKLDAL 165 (357)
T ss_dssp TCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEC-CCT------T------SCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEE-eCC------C------CCHHHHHHHHHHHHHHHHHc
Confidence 999999999995321 222222 33444678999999 442 3 37788888888887766543
Q ss_pred CCCeEE------EEec-chh--------h-cccHHHHHHHHHHhHh-cC----CCEEEe-----ccCC-------CHHHH
Q 012815 222 GSDIVI------VART-DSR--------Q-ALSLEESLRRSRAFAD-AG----ADVLFI-----DALA-------SKEEM 268 (456)
Q Consensus 222 G~dfvI------iART-DA~--------~-~~~ldeAI~RakAy~e-AG----AD~Ifi-----e~~~-------s~eei 268 (456)
| .-| ++-. |.. . -..-+| |+.|.+ .| .|++=+ ||.- +.+.+
T Consensus 166 g--vsVEaELG~igG~Edgv~~~~~~~~~~yT~Pee----a~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L 239 (357)
T 3qm3_A 166 G--VALEIELGCTGGEEDGVDNTGIDNSKLYTQPED----VALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEIL 239 (357)
T ss_dssp T--CEEEEECCCCCC-----CCSSTTCTTTSCCHHH----HHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHH
T ss_pred C--CeEEEEeeeeccccCCccccccccccccCCHHH----HHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHH
Confidence 3 111 1111 110 0 023344 444544 23 466643 3321 34556
Q ss_pred HHHHH----hC--CC-CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHH
Q 012815 269 KAFCE----IS--PL-VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAI 328 (456)
Q Consensus 269 ~~i~~----~v--~~-vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i 328 (456)
+++.+ .+ +. .|+++ +++++...|.=...+.-++|+.-|=+..-+..+.+.++++.+.+=
T Consensus 240 ~~i~~~i~~~~~~~~~~~vpL-VlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~ 305 (357)
T 3qm3_A 240 KNSQKFVKDKFALNSDKPINF-VFHGGSGSELKDIKNAVSYGVIKMNIDTDTQWAFWDGVREYELKN 305 (357)
T ss_dssp HHHHHHHHHHTTCSCSCCSCE-EECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCCCcE-EEeCCCCCCHHHHHHHHHCCceEEEechHHHHHHHHHHHHHHHhC
Confidence 65543 22 11 12333 345433223222344556899999999999999999999987653
No 407
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=86.95 E-value=21 Score=33.66 Aligned_cols=149 Identities=16% Similarity=0.125 Sum_probs=83.3
Q ss_pred HHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHH-HHHHHHHHHhHh
Q 012815 142 GQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAV-MRIKAAVDARKE 220 (456)
Q Consensus 142 ~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v-~kI~AA~~Ar~~ 220 (456)
++.+.+. +.+++.|.=.+ -.+..+...++.+.++||+.|.+--.. | .+++ .-++++++.. .
T Consensus 48 v~~lr~~-~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~~---------g------~~~l~~~~~~~~~~~-~ 109 (246)
T 2yyu_A 48 VAFLKEQ-GHAVFLDLKLH-DIPNTVKQAMKGLARVGADLVNVHAAG---------G------RRMMEAAIEGLDAGT-P 109 (246)
T ss_dssp HHHHHHT-TCEEEEEEEEC-SCHHHHHHHHHHHHHTTCSEEEEEGGG---------C------HHHHHHHHHHHHHHS-C
T ss_pred HHHHHHC-CCeEEEEeecc-cchHHHHHHHHHHHhcCCCEEEEECCC---------C------HHHHHHHHHHHHhhc-c
Confidence 3444433 67899998887 346677788999999999999873221 1 1111 1222222210 0
Q ss_pred hC--CC-eE-EEEecch----h-hc-----ccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeec
Q 012815 221 SG--SD-IV-IVARTDS----R-QA-----LSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLE 286 (456)
Q Consensus 221 ~G--~d-fv-IiARTDA----~-~~-----~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~ 286 (456)
.| .. .+ |+..|-- . .. ...|..+..++.-.+.|.+.++... .+++++.+..+..+ +-+.
T Consensus 110 ~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~----~ei~~lr~~~~~~~--i~V~- 182 (246)
T 2yyu_A 110 SGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA----NEAAFIKERCGASF--LAVT- 182 (246)
T ss_dssp SSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH----HHHHHHHHHHCTTS--EEEE-
T ss_pred cCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH----HHHHHHHHhcCCCC--EEEe-
Confidence 23 12 22 3334441 1 10 1124455555555789999854333 23666655544222 2222
Q ss_pred cCCCCCC----------CCHHHHHhcCCCEEeccchHHHH
Q 012815 287 GGGKTPI----------LNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 287 ~~g~tp~----------lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
||-.+. .+++++.+.|...++.|...+.+
T Consensus 183 -gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 221 (246)
T 2yyu_A 183 -PGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA 221 (246)
T ss_dssp -CCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS
T ss_pred -CCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC
Confidence 344442 27899999999999999887764
No 408
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.93 E-value=9.4 Score=37.92 Aligned_cols=86 Identities=16% Similarity=0.069 Sum_probs=58.7
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhccc-CCCCCCCHHHHHHHHHHHHhc-----cCCcEEEeCCCCC-CCHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQA-----VSIPVIGDGDNGY-GNAMNVKRTVKG 173 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~-PD~~~lt~~Eml~~~r~I~ra-----~~iPVIaD~DtGY-G~~~nv~rtVk~ 173 (456)
+++.++++|+.+|-+=+-.. --..|+ +...+++.+|++..+++.+.+ .+.-|++=.|.=. .+...+.+-.+.
T Consensus 100 tv~~l~~aGaagv~iEDq~~-~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 178 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQ-TKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRA 178 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCC-C-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHH
Confidence 45667789999998864221 112233 345689999999999888754 3567777777621 135566777789
Q ss_pred HHHhCccEEEeCCC
Q 012815 174 YIKAGFAGIILEDQ 187 (456)
Q Consensus 174 l~~AGaaGI~IEDq 187 (456)
|.+|||++|.+|.-
T Consensus 179 y~eAGAD~ifi~g~ 192 (302)
T 3fa4_A 179 ARDAGADVGFLEGI 192 (302)
T ss_dssp HHTTTCSEEEETTC
T ss_pred HHHcCCCEEeecCC
Confidence 99999999999874
No 409
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=86.90 E-value=2.7 Score=45.01 Aligned_cols=134 Identities=17% Similarity=0.232 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHhccCCcEEEeCCCC----------CC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcccc
Q 012815 134 SYGEMVDQGQLITQAVSIPVIGDGDNG----------YG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVV 202 (456)
Q Consensus 134 t~~Eml~~~r~I~ra~~iPVIaD~DtG----------YG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lv 202 (456)
..++|...++.+.+.++.|+++=...| |- ++....+.++++.+.|+ +|=++ .||-+
T Consensus 210 gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~---~iiGG----CCGTt------ 276 (566)
T 1q7z_A 210 GPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGV---NIFGG----CCGTT------ 276 (566)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTC---SEECC----CTTCC------
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCC---cEEcc----ccCCC------
Confidence 467888888888887778887644333 32 47778888999999994 34466 58854
Q ss_pred CHHHHHHHHHHHHHHhH-----h-------hC------CCeEEEEe------cchhh----cccHHHHHHHHHHhHhcCC
Q 012815 203 SREEAVMRIKAAVDARK-----E-------SG------SDIVIVAR------TDSRQ----ALSLEESLRRSRAFADAGA 254 (456)
Q Consensus 203 p~ee~v~kI~AA~~Ar~-----~-------~G------~dfvIiAR------TDA~~----~~~ldeAI~RakAy~eAGA 254 (456)
-++++.|+.+++... . .+ ..++|++= .|++. ..+.++++++|+.+.+.||
T Consensus 277 --P~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GA 354 (566)
T 1q7z_A 277 --PEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGA 354 (566)
T ss_dssp --HHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCC
Confidence 256777766664221 0 00 12444443 23332 2357999999999999999
Q ss_pred CEEEec-c---CCCHHHHHHHHHhC---CCCceee
Q 012815 255 DVLFID-A---LASKEEMKAFCEIS---PLVPKMA 282 (456)
Q Consensus 255 D~Ifie-~---~~s~eei~~i~~~v---~~vP~~~ 282 (456)
|+|=|- + +...||++++...+ ..+|+.+
T Consensus 355 diIDIgpg~~~v~~~ee~~rvv~~i~~~~~vpisI 389 (566)
T 1q7z_A 355 EVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSL 389 (566)
T ss_dssp SEEEEECSSGGGSCHHHHHHHHHHHHHHTCSCEEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHhhCCceEEE
Confidence 999773 2 45678888877532 1356654
No 410
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=86.84 E-value=4.3 Score=41.05 Aligned_cols=155 Identities=14% Similarity=0.043 Sum_probs=85.9
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCCCC--C----
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG--Y---- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~DtG--Y---- 161 (456)
-.|+.+.++|||+|=+- |+-+.-. ..-..|.--=+++. +++.+++|+++++ -||.+.+-.+ |
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 46788888999999875 3322210 01112311113433 3455666766664 2999998532 1
Q ss_pred -CCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 162 -GNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 162 -G~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
+.. ....+.++.++++|++.|++-...... .+. +.... +++.+|+.+ .+..++.+++-+.
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~-~~~--~~~~~---~~~~~vr~~------~~iPvi~~G~i~~------ 312 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVVEPRMKT-AWE--KIECT---ESLVPMRKA------YKGTFIVAGGYDR------ 312 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------CC---CCSHHHHHH------CCSCEEEESSCCH------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC-CCC--ccccH---HHHHHHHHH------cCCCEEEeCCCCH------
Confidence 233 467888999999999999995442100 000 00000 223344322 2345666666521
Q ss_pred HHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 240 EESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 240 deAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
+.++.+.+.| ||+|.+-- +.+++..+++.+..+
T Consensus 313 ----~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~ 348 (376)
T 1icp_A 313 ----EDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAP 348 (376)
T ss_dssp ----HHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ----HHHHHHHHCCCCcEEeecHHHHhCccHHHHHHcCCC
Confidence 3455666676 99999843 455667777776544
No 411
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.79 E-value=4.6 Score=39.97 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+...+.+.++++++.||+-|-|-.+. --.|-+-++.+|-.+|+.-++++-.+. .+..|.- |.... ++
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeS------trPga~~v~~~eE~~RvvpvI~~l~~~-~~vpiSI--DT~~~----~V 127 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGES------TRPGFAKVSVEEEIKRVVPMIQAVSKE-VKLPISI--DTYKA----EV 127 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----------CCCCCHHHHHHHHHHHHHHHHHH-SCSCEEE--ECSCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCc------CCCCCCCCCHHHHHHHHHHHHHHHHhc-CCceEEE--eCCCH----HH
Confidence 35678888899999999999986543 112334566666667766555443321 1332322 33332 22
Q ss_pred HHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 243 LRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 243 I~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+++..++||++|- +.+....+++.+++++.. .|+.+
T Consensus 128 ---~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g-~~vVl 164 (297)
T 1tx2_A 128 ---AKQAIEAGAHIINDIWGAKAEPKIAEVAAHYD-VPIIL 164 (297)
T ss_dssp ---HHHHHHHTCCEEEETTTTSSCTHHHHHHHHHT-CCEEE
T ss_pred ---HHHHHHcCCCEEEECCCCCCCHHHHHHHHHhC-CcEEE
Confidence 3333345999995 334332246666766665 56543
No 412
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=86.70 E-value=17 Score=37.06 Aligned_cols=157 Identities=13% Similarity=-0.001 Sum_probs=88.2
Q ss_pred HHHHHHHHhCCcEEEec---chHHhhh----hcccCCCCCCCHHH----HHHHHHHHHhccC-CcEEEeCCCC--C----
Q 012815 100 LSAKLVEKSGFSFCFTS---GFSISAA----RLALPDTGFISYGE----MVDQGQLITQAVS-IPVIGDGDNG--Y---- 161 (456)
Q Consensus 100 lSArl~e~aGfdAI~vS---G~avSas----~lG~PD~~~lt~~E----ml~~~r~I~ra~~-iPVIaD~DtG--Y---- 161 (456)
-.|+.+.++|||+|=+= ||-++-. ..-.-|.--=+++. +++.+++|+++++ .||.+.+--+ |
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 56788888999999875 3333211 01123321123432 4555666766664 4898885432 1
Q ss_pred -CCH-HHHHHHHHHHHHhC------ccEEEeCCCCCCCCccCCCCcc--ccCH----HHHHHHHHHHHHHhHhhCCCeEE
Q 012815 162 -GNA-MNVKRTVKGYIKAG------FAGIILEDQVSPKGCGHTRGRK--VVSR----EEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 162 -G~~-~nv~rtVk~l~~AG------aaGI~IEDq~~pK~CGH~~gk~--lvp~----ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
++. ++..+.++.++++| ++.|++-..... .+. ..+ .++. .+++.+|+ ++ .+..++.
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~vk---~~---~~iPvi~ 324 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYV---AYG-QTEAGRLGSEEEEARLMRTLR---NA---YQGTFIC 324 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCC---TTT-TSSSTTTTHHHHHHHHHHHHH---HH---CSSCEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccc---ccc-CCccccccCCcchHHHHHHHH---HH---CCCCEEE
Confidence 233 56888999999999 999999554210 000 001 0111 12333332 22 2345666
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcC-CCEEEec--cCCCHHHHHHHHHhCC
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAG-ADVLFID--ALASKEEMKAFCEISP 276 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAG-AD~Ifie--~~~s~eei~~i~~~v~ 276 (456)
+++.+ .+.++.+.+.| ||+|.+- .+.+++..+++.+..+
T Consensus 325 ~G~i~----------~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~ 366 (402)
T 2hsa_B 325 SGGYT----------RELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAP 366 (402)
T ss_dssp ESSCC----------HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred eCCCC----------HHHHHHHHHCCCCceeeecHHHHhCchHHHHHHhCCC
Confidence 66652 14456666677 9999984 3456667888876544
No 413
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.69 E-value=1.9 Score=41.69 Aligned_cols=136 Identities=18% Similarity=0.077 Sum_probs=87.5
Q ss_pred ecccC-C--hHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc---CCc--EEEeCCC---CC
Q 012815 93 GPACF-D--ALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV---SIP--VIGDGDN---GY 161 (456)
Q Consensus 93 ~pgay-D--alSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~---~iP--VIaD~Dt---GY 161 (456)
+|.=| + .-+++-+.++|+.+|-+=+.. +.+...+++.+|++..+++++++. ++| |++=.|. |.
T Consensus 87 ~~~Gyg~~~~~~~~~l~~aGa~gv~iEd~~------~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~ 160 (255)
T 2qiw_A 87 VESGYGLSPADLIAQILEAGAVGINVEDVV------HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGA 160 (255)
T ss_dssp CTTCTTCCHHHHHHHHHHTTCCEEEECSEE------GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCT
T ss_pred cCCCcCcHHHHHHHHHHHcCCcEEEECCCC------CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccC
Confidence 55446 2 456666677999999886422 234557899999999999998773 577 7776563 44
Q ss_pred CC----HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchh-hc
Q 012815 162 GN----AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR-QA 236 (456)
Q Consensus 162 G~----~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~-~~ 236 (456)
++ ...+.+-.+.|.+|||.+|.+|.- |..+.+++|...+ ..+..++...... ..
T Consensus 161 ~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~---------------~~~~~~~~i~~~~------~~P~n~~~~~~~~~p~ 219 (255)
T 2qiw_A 161 DVFEDPMVEAIKRIKLMEQAGARSVYPVGL---------------STAEQVERLVDAV------SVPVNITAHPVDGHGA 219 (255)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTCSEEEECCC---------------CSHHHHHHHHTTC------SSCBEEECBTTTBBTT
T ss_pred CcchHHHHHHHHHHHHHHHcCCcEEEEcCC---------------CCHHHHHHHHHhC------CCCEEEEecCCCCCCC
Confidence 42 456777779999999999999873 1123444543322 2355555443221 11
Q ss_pred ccHHHHHHHHHHhHhcCCCEEEeccC
Q 012815 237 LSLEESLRRSRAFADAGADVLFIDAL 262 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAGAD~Ifie~~ 262 (456)
.. ...+.++|...|..+..
T Consensus 220 ~~-------~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 220 GD-------LATLAGLGVRRVTFGPL 238 (255)
T ss_dssp BC-------HHHHHHTTCCEEECTTH
T ss_pred CC-------HHHHHHcCCCEEEEHHH
Confidence 12 34677899888877654
No 414
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=86.55 E-value=7.8 Score=39.02 Aligned_cols=142 Identities=15% Similarity=0.100 Sum_probs=80.5
Q ss_pred HHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE--EEecchh-hcccH------
Q 012815 169 RTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI--VARTDSR-QALSL------ 239 (456)
Q Consensus 169 rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI--iARTDA~-~~~~l------ 239 (456)
..|+++++.||++|++==-. |.+..+- -.+++.+.|..+.++++..|-+|++ +.+-... ...+.
T Consensus 114 ~sve~a~~~GADAVk~lv~~------g~d~~~e-~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 114 WSIKRLKEAGADAVKFLLYY------DVDGDPQ-VNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp CCHHHHHHTTCSEEEEEEEE------CTTSCHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred cCHHHHHHcCCCEEEEEEEc------CCCchHH-HHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccC
Confidence 45788999999999984332 1111100 0025667777777777777888888 6653211 11111
Q ss_pred HH-HHHHHHHh--HhcCCCEEEeccCCCH---------------HH----HHHHHHhCCCCceeeeeeccCCCCCCCC--
Q 012815 240 EE-SLRRSRAF--ADAGADVLFIDALASK---------------EE----MKAFCEISPLVPKMANMLEGGGKTPILN-- 295 (456)
Q Consensus 240 de-AI~RakAy--~eAGAD~Ifie~~~s~---------------ee----i~~i~~~v~~vP~~~N~~~~~g~tp~lt-- 295 (456)
.+ ...-++.+ .+.|||++=++-+-+. ++ ++++++..+ +| +-++.+ |.+...-
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~-~P--~v~lsg-G~~~~~fl~ 262 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTD-LP--YIYLSA-GVSAELFQE 262 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCS-SC--EEEECT-TCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCC-CC--EEEECC-CCCHHHHHH
Confidence 22 33335555 5789999999865432 33 445555443 45 434443 3221111
Q ss_pred -HHHHHhcCC--CEEeccchHHHHHHHHH
Q 012815 296 -PLELEELGF--KLVAYPLSLIGVSVRAM 321 (456)
Q Consensus 296 -~~eL~elGv--~~Vs~p~~ll~aa~~A~ 321 (456)
++.-.+.|. +-|++|=..+..++...
T Consensus 263 ~v~~A~~aGa~f~Gv~~GRnvwq~~v~~~ 291 (332)
T 3iv3_A 263 TLVFAHKAGAKFNGVLCGRATWAGSVQVY 291 (332)
T ss_dssp HHHHHHHHTCCCCEEEECHHHHTTHHHHH
T ss_pred HHHHHHHcCCCcceEEeeHHHHHhhhhhh
Confidence 133344666 99999988887776553
No 415
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.52 E-value=11 Score=37.69 Aligned_cols=132 Identities=11% Similarity=0.059 Sum_probs=75.4
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE-eCCC--CCC-CHHHHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDN--GYG-NAMNVKRTVKGYIK 176 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa-D~Dt--GYG-~~~nv~rtVk~l~~ 176 (456)
-|+.++++|+|++.+..- -....+-+++.+|-+.|++++++||+. +.+. |+- .++.+.+.+++ -
T Consensus 118 la~~A~~~Gadavlv~~P----------~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~--~ 185 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINP----------YYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADS--R 185 (343)
T ss_dssp HHHHHHHHTCSEEEEECC----------SSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHH--C
T ss_pred HHHHHHhcCCCEEEECCC----------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHh--C
Confidence 356677789999987631 112237899999999999999999875 7764 443 34445544422 2
Q ss_pred hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCE
Q 012815 177 AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADV 256 (456)
Q Consensus 177 AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~ 256 (456)
-.+.|||-.. |. .+ ++...++......++|.|..=.|... ..+..+|++.
T Consensus 186 pnIvgiKdss-------gd--------~~----~~~~l~~~~~~~~~~f~v~~G~D~~~-----------l~~l~~Ga~G 235 (343)
T 2v9d_A 186 SNIIGIKDTI-------DS--------VA----HLRSMIHTVKGAHPHFTVLCGYDDHL-----------FNTLLLGGDG 235 (343)
T ss_dssp TTEEEEEECC-------SC--------HH----HHHHHHHHHHHHCTTCEEEESSGGGH-----------HHHHHTTCCE
T ss_pred CCEEEEEeCC-------CC--------HH----HHHHHHHhcCCCCCCEEEEECcHHHH-----------HHHHHCCCCE
Confidence 4688998322 21 12 22222222210014787766556542 1234579998
Q ss_pred EEeccC-CCHHHHHHHHHh
Q 012815 257 LFIDAL-ASKEEMKAFCEI 274 (456)
Q Consensus 257 Ifie~~-~s~eei~~i~~~ 274 (456)
++--.- --++.+.++.+.
T Consensus 236 ~is~~anv~P~~~~~l~~a 254 (343)
T 2v9d_A 236 AISASGNFAPQVSVNLLKA 254 (343)
T ss_dssp ECCGGGTTCHHHHHHHHHH
T ss_pred EEeCHHHhHHHHHHHHHHH
Confidence 764321 233455555543
No 416
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=86.51 E-value=1.8 Score=41.75 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=56.9
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchHHh-----h-h-----------hcccCCCCCC----CHHHHHHHHHHHHh
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFSIS-----A-A-----------RLALPDTGFI----SYGEMVDQGQLITQ 147 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~avS-----a-s-----------~lG~PD~~~l----t~~Eml~~~r~I~r 147 (456)
+..+++.+++.-.+..+.++|++.|.+.||... + . ..|+.+.... .....++.++.+++
T Consensus 125 ~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~ 204 (297)
T 2zbt_A 125 KVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHD 204 (297)
T ss_dssp SSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHH
T ss_pred CceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHH
Confidence 455667789998888899999999987764200 0 0 1133111100 01112345666777
Q ss_pred ccCCcEE--EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 148 AVSIPVI--GDGDNGYGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 148 a~~iPVI--aD~DtGYG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
.+++|++ +|. |-.+.. +++++.++||+|+.+=-
T Consensus 205 ~~~~pvi~~a~G--GI~~~e----~i~~~~~aGadgvvvGs 239 (297)
T 2zbt_A 205 HGRLPVVNFAAG--GIATPA----DAALMMHLGMDGVFVGS 239 (297)
T ss_dssp HSSCSSCEEBCS--SCCSHH----HHHHHHHTTCSEEEECG
T ss_pred hcCCCcEEEeeC--CCCCHH----HHHHHHHcCCCEEEEch
Confidence 7789988 654 665654 44567778999999843
No 417
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=86.51 E-value=4 Score=40.73 Aligned_cols=125 Identities=15% Similarity=0.215 Sum_probs=79.3
Q ss_pred CCCCHHH-HHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhccc
Q 012815 160 GYGNAMN-VKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALS 238 (456)
Q Consensus 160 GYG~~~n-v~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ 238 (456)
+.|++.. +.+..+.+.+.|...+||- .|+. +.++-+++++|++++. |+++.+ +.|+.....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~G~~~~KiK-------vg~~------~~~~d~~~v~avR~~~---g~~~~l--~vDan~~~~ 200 (370)
T 1chr_A 139 ASGDTKRDLDSAVEMIERRRHNRFKVK-------LGFR------SPQDDLIHMEALSNSL---GSKAYL--RVDVNQAWD 200 (370)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCCEEEEE-------CSSS------CSHHHHHHHHHHHHHS---STTCCE--EEECTTCCC
T ss_pred cCCCcHHHHHHHHHHHHHCCCCEEEEe-------cCCC------CHHHHHHHHHHHHHhc---CCCCEE--EEECCCCCC
Confidence 3455544 4444444444899999982 2321 2345678888887764 455544 337777777
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH---HHhcC-CCEEeccc
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLE---LEELG-FKLVAYPL 311 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e---L~elG-v~~Vs~p~ 311 (456)
.++|++.++++.+.| ..|+|-+ .+.+.++++.+..+ +|+..+ .. ..+..+ +-+.| +..|..-.
T Consensus 201 ~~~a~~~~~~l~~~~--i~~iEqP~~~~~~~~~~~l~~~~~-iPia~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 201 EQVASVYIPELEALG--VELIEQPVGRENTQALRRLSDNNR-VAIMAD-----ES--LSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp TTHHHHHTHHHHTTT--EEEEECCSCTTCHHHHHHHHHHSC-SEEEES-----SS--CCSHHHHHHHHTTTSCSEEEECT
T ss_pred HHHHHHHHHHHHhcC--CCEEECCCCcccHHHHHHHHhhCC-CCEEeC-----CC--cCCHHHHHHHHHcCCCCEEEECc
Confidence 899999999999976 5678764 34567889988876 777653 11 234444 44555 66666543
Q ss_pred h
Q 012815 312 S 312 (456)
Q Consensus 312 ~ 312 (456)
.
T Consensus 271 ~ 271 (370)
T 1chr_A 271 C 271 (370)
T ss_dssp T
T ss_pred c
Confidence 3
No 418
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=86.42 E-value=5.9 Score=38.51 Aligned_cols=140 Identities=16% Similarity=0.096 Sum_probs=87.0
Q ss_pred ChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh---ccCCcEEEeC------CC-CCCCHHHH
Q 012815 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIGDG------DN-GYGNAMNV 167 (456)
Q Consensus 98 DalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r---a~~iPVIaD~------Dt-GYG~~~nv 167 (456)
+.-....+.++|++.+.+.... +-. +-. ..-..+.+|.++.++.+.+ ..+++|.++. |+ |.-++..+
T Consensus 82 ~~~~i~~a~~ag~~~v~i~~~~-sd~-~~~-~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~ 158 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEVVIFGAA-SEL-FTK-KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKV 158 (298)
T ss_dssp SHHHHHHHHHTTCSEEEEEEES-CHH-HHH-HHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHH
T ss_pred CHHhHHHHHHCCCCEEEEEecC-CHH-HHH-HHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHH
Confidence 4445666777899988776211 100 000 1112478888887776554 3467886544 32 33367889
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012815 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~Rak 247 (456)
.+.++.+.++||..|.|-|.. | +..++++.+.|++.++.... ..+-+=...|. .-++.-+.
T Consensus 159 ~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~~~~lv~~l~~~~~~--~~i~~H~Hn~~------Gla~An~l 219 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEISLGDTI-----G------VGTPGIMKDMLSAVMQEVPL--AALAVHCHDTY------GQALANTL 219 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEETT-----S------CCCHHHHHHHHHHHHHHSCG--GGEEEEEBCTT------SCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCC-----C------CcCHHHHHHHHHHHHHhCCC--CeEEEEECCCC------chHHHHHH
Confidence 999999999999999999985 2 34566777777777665311 12333333332 12456677
Q ss_pred HhHhcCCCEEEe
Q 012815 248 AFADAGADVLFI 259 (456)
Q Consensus 248 Ay~eAGAD~Ifi 259 (456)
+..+|||+.|=.
T Consensus 220 aA~~aGa~~vd~ 231 (298)
T 2cw6_A 220 MALQMGVSVVDS 231 (298)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHhCCCEEEe
Confidence 778999997753
No 419
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.42 E-value=15 Score=35.62 Aligned_cols=117 Identities=11% Similarity=0.078 Sum_probs=65.6
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCC-CCCCccCCCCccc-----------cCHHHHHHHHHHHHHHh
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQV-SPKGCGHTRGRKV-----------VSREEAVMRIKAAVDAR 218 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~-~pK~CGH~~gk~l-----------vp~ee~v~kI~AA~~Ar 218 (456)
..+|.=+-.||-+.+...+.++.++++||+.|+|-=-. .|- .+|..+ +..+...+-|+..++..
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~----aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~ 93 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPL----ADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQH 93 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCT----TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC----CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 33444445677777889999999999999999983111 111 122111 12223333444433321
Q ss_pred HhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCH--HHHHHHHHhCC
Q 012815 219 KESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASK--EEMKAFCEISP 276 (456)
Q Consensus 219 ~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~--eei~~i~~~v~ 276 (456)
...+++++.--+.....+++.- ++.+.+||+|.+.++-++-+ +++.+.++...
T Consensus 94 --~~~Pivlm~Y~npv~~~g~e~f---~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~g 148 (267)
T 3vnd_A 94 --PDMPIGLLLYANLVFANGIDEF---YTKAQAAGVDSVLIADVPVEESAPFSKAAKAHG 148 (267)
T ss_dssp --TTCCEEEEECHHHHHHHCHHHH---HHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT
T ss_pred --CCCCEEEEecCcHHHHhhHHHH---HHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcC
Confidence 1245666643333333455443 55567899999999877643 35555555554
No 420
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=86.34 E-value=3.3 Score=42.75 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=56.6
Q ss_pred CCceeecccCChHHHHHHHHhCCcEEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHH
Q 012815 88 PGVHQGPACFDALSAKLVEKSGFSFCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMN 166 (456)
Q Consensus 88 ~~~lv~pgayDalSArl~e~aGfdAI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~n 166 (456)
+-+++.-++-+.-.|+.+.++|+++|.+| |.+......-+.+.+ .+.-+.+..+...++..++|||+|. |..+..+
T Consensus 274 ~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~-~p~~~~l~~~~~~~~~~~ipvia~G--Gi~~~~d 350 (491)
T 1zfj_A 274 NRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVG-VPQVTAIYDAAAVAREYGKTIIADG--GIKYSGD 350 (491)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCC-CCHHHHHHHHHHHHHHTTCEEEEES--CCCSHHH
T ss_pred CCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCC-CCcHHHHHHHHHHHhhcCCCEEeeC--CCCCHHH
Confidence 45677778889999999999999999997 211000000111222 3333444445555556789999883 4445555
Q ss_pred HHHHHHHHHHhCccEEEe
Q 012815 167 VKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 167 v~rtVk~l~~AGaaGI~I 184 (456)
+. ++.++||+++.+
T Consensus 351 i~----kal~~GA~~v~v 364 (491)
T 1zfj_A 351 IV----KALAAGGNAVML 364 (491)
T ss_dssp HH----HHHHTTCSEEEE
T ss_pred HH----HHHHcCCcceee
Confidence 55 344689999999
No 421
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=86.33 E-value=0.99 Score=45.95 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=54.3
Q ss_pred HHHHHHhC-CCceeec-ccCChHHHHHHHHhCCcEEEecchH---Hh-hhhcccCCCCCCCHHHHHHHHHHHHhccCCcE
Q 012815 80 SLRQILEL-PGVHQGP-ACFDALSAKLVEKSGFSFCFTSGFS---IS-AARLALPDTGFISYGEMVDQGQLITQAVSIPV 153 (456)
Q Consensus 80 ~Lr~ll~~-~~~lv~p-gayDalSArl~e~aGfdAI~vSG~a---vS-as~lG~PD~~~lt~~Eml~~~r~I~ra~~iPV 153 (456)
.++.+.+. ++..+++ ++-++-.|+.++++|+|+|.+|..+ .. ....|. + ++ .+..+..+++... ||
T Consensus 131 ~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~---g-~p---~l~aI~~~~~~~~-PV 202 (361)
T 3r2g_A 131 TLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGF---G-VP---MLTCIQDCSRADR-SI 202 (361)
T ss_dssp HHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCC---C-CC---HHHHHHHHTTSSS-EE
T ss_pred HHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCc---c-HH---HHHHHHHHHHhCC-CE
Confidence 34443332 3455666 6999999999999999999997221 10 001111 1 22 2334444554444 99
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 154 IGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 154 IaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
|+|..- .+..++. +++++||++|.|=
T Consensus 203 IAdGGI--~~~~di~----kALa~GAd~V~iG 228 (361)
T 3r2g_A 203 VADGGI--KTSGDIV----KALAFGADFVMIG 228 (361)
T ss_dssp EEESCC--CSHHHHH----HHHHTTCSEEEES
T ss_pred EEECCC--CCHHHHH----HHHHcCCCEEEEC
Confidence 999433 2343443 4556899999993
No 422
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=86.33 E-value=20 Score=35.71 Aligned_cols=70 Identities=9% Similarity=0.065 Sum_probs=52.4
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCc
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGF 179 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGa 179 (456)
.|+.+.++||+++=+-. |. .+.+.++.+++|++++ ++||.+|+..|| +..++.+.++.+.+.|+
T Consensus 154 ~a~~~~~~Gf~~iKik~--------g~------~~~~~~e~v~avr~a~gd~~l~vD~n~~~-~~~~a~~~~~~l~~~~i 218 (384)
T 2pgw_A 154 DAAVGHAQGERVFYLKV--------GR------GEKLDLEITAAVRGEIGDARLRLDANEGW-SVHDAINMCRKLEKYDI 218 (384)
T ss_dssp HHHHHHHTTCCEEEEEC--------CS------CHHHHHHHHHHHHTTSTTCEEEEECTTCC-CHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHcCCCEEEECc--------CC------CHHHHHHHHHHHHHHcCCcEEEEecCCCC-CHHHHHHHHHHHHhcCC
Confidence 34445567999887631 21 5777788889998888 699999998888 46677788889999998
Q ss_pred cEEEeCCC
Q 012815 180 AGIILEDQ 187 (456)
Q Consensus 180 aGI~IEDq 187 (456)
.- ||+-
T Consensus 219 ~~--iEqP 224 (384)
T 2pgw_A 219 EF--IEQP 224 (384)
T ss_dssp SE--EECC
T ss_pred CE--EeCC
Confidence 75 5754
No 423
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=86.27 E-value=1.6 Score=42.99 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=53.3
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCC----CCceeeeeec
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISP----LVPKMANMLE 286 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~----~vP~~~N~~~ 286 (456)
|..++++.++..+...|..-.|. +++++...++|||.|+++... .+++++..+.+. .+++. .
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~t---------~eea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~~~~~v~ie----a 246 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVDS---------LEQLDAVLPEKPELILLDNFA-VWQTQTAVQRRDSRAPTVMLE----S 246 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESS---------HHHHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEE----E
T ss_pred HHHHHHHHHHhCCCCCEEEEeCC---------HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeEEE----E
Confidence 34444443333343355555543 355666677999999999864 467776665432 22222 2
Q ss_pred cCCCCCCCCHHHHHhcCCCEEeccc
Q 012815 287 GGGKTPILNPLELEELGFKLVAYPL 311 (456)
Q Consensus 287 ~~g~tp~lt~~eL~elGv~~Vs~p~ 311 (456)
.||-++ =+..++++.|+..++.+.
T Consensus 247 SGGIt~-~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 247 SGGLSL-QTAATYAETGVDYLAVGA 270 (284)
T ss_dssp ESSCCT-TTHHHHHHTTCSEEECGG
T ss_pred ECCCCH-HHHHHHHhcCCCEEEECH
Confidence 245443 578999999999999876
No 424
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=86.26 E-value=3.4 Score=41.64 Aligned_cols=143 Identities=14% Similarity=0.127 Sum_probs=76.5
Q ss_pred HHHHHHHhCCc-EEEec-chHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012815 101 SAKLVEKSGFS-FCFTS-GFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (456)
Q Consensus 101 SArl~e~aGfd-AI~vS-G~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AG 178 (456)
.|+.++++|++ +|=+= |--. .-|..+. .-..+.+.+.++++.+.+++||++=+--++ +..++.+.++.....|
T Consensus 146 ~a~~l~~~g~~d~ielNisCPn---~~G~~~l-~~~~e~l~~il~av~~~~~~PV~vKi~p~~-~~~~~a~~~~~aga~~ 220 (345)
T 3oix_A 146 ILXMVEASKYQGLVELNLSCPN---VPGXPQI-AYDFETTDQILSEVFTYFTKPLGIKLPPYF-DIVHFDQAAAIFNXYP 220 (345)
T ss_dssp HHHHHHHSSCCSEEEEECSCCC---STTCCCG-GGCHHHHHHHHHHHTTTCCSCEEEEECCCC-CHHHHHHHHHHHTTSC
T ss_pred HHHHHhccCCCcEEEEecCCCC---cCCchhh-cCCHHHHHHHHHHHHHHhCCCeEEEECCCC-CHHHHHHHHHHhCCCc
Confidence 46667777887 66543 2111 1143332 134566777788888888999999877663 5555555554444444
Q ss_pred ccEEE----------eCCCC--C-CC-CccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHH
Q 012815 179 FAGII----------LEDQV--S-PK-GCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (456)
Q Consensus 179 aaGI~----------IEDq~--~-pK-~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~ 244 (456)
+++++ |.... . ++ ..|-..|+++.|.. .+.|+.++++ .++++-|++=-+-... +
T Consensus 221 i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a--~~~v~~i~~~---~~~~ipIIg~GGI~s~-------~ 288 (345)
T 3oix_A 221 LTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTA--LANVHAFYKR---LNPSIQIIGTGGVXTG-------R 288 (345)
T ss_dssp CSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHH--HHHHHHHHTT---SCTTSEEEEESSCCSH-------H
T ss_pred eEEEEeecccccceeeccCccccccccccCCcCCccccHHH--HHHHHHHHHH---cCCCCcEEEECCCCCh-------H
Confidence 45443 32111 0 01 11222345554442 3334333333 2335677766554332 4
Q ss_pred HHHHhHhcCCCEEEec
Q 012815 245 RSRAFADAGADVLFID 260 (456)
Q Consensus 245 RakAy~eAGAD~Ifie 260 (456)
.+..+.++|||+|.+-
T Consensus 289 da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 289 DAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHTCSEEEES
T ss_pred HHHHHHHhCCCEEEEC
Confidence 4555667999999874
No 425
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=86.22 E-value=3.8 Score=41.62 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHH
Q 012815 164 AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESL 243 (456)
Q Consensus 164 ~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI 243 (456)
++.+.+.++++.+.|...++|-=. | ++-+++|++++++. |+++.|.. |+......++ +
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~--~--------------~~d~~~v~avR~a~---G~~~~L~v--DaN~~w~~~~-~ 221 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIK--P--------------GWDVEPLQETRRAV---GDHFPLWT--DANSSFELDQ-W 221 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECB--T--------------TBSHHHHHHHHHHH---CTTSCEEE--ECTTCCCGGG-H
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeC--c--------------chHHHHHHHHHHhc---CCCCEEEE--eCCCCCCHHH-H
Confidence 788888999999999999998321 1 11266888877765 55555433 7877777788 8
Q ss_pred HHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcC-CCEEeccchHH
Q 012815 244 RRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELG-FKLVAYPLSLI 314 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elG-v~~Vs~p~~ll 314 (456)
+.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+..+ .. ..+.. ++-+.| +..|..-..-.
T Consensus 222 ~~~~~l~~~~i~--~iEqP~~~~d~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~~~~~~~d~v~~k~~~~ 289 (400)
T 3mwc_A 222 ETFKAMDAAKCL--FHEQPLHYEALLDLKELGERIE-TPICLD-----ES--LISSRVAEFVAKLGISNIWNIKIQRV 289 (400)
T ss_dssp HHHHHHGGGCCS--CEESCSCTTCHHHHHHHHHHSS-SCEEES-----TT--CCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHhcCCC--EEeCCCChhhHHHHHHHHhhCC-CCEEEe-----CC--cCCHHHHHHHHhcCCCCEEEEcchhh
Confidence 999999998754 56653 25678889998876 787653 11 23444 444556 66665544433
No 426
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=86.21 E-value=1.3 Score=41.49 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=50.4
Q ss_pred HHHHHHHHhHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 241 ESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
+.++-++.|.++|||.|.+..+ ...+.++++++.+. +|+.++ +|-...-..+++.+.|+..|.++..
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~----Ggi~~~~~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLRGADKVSINTA 110 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEECCSHH
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCC-CCEEEe----CCCCCHHHHHHHHHcCCCeeehhhH
Confidence 3577899999999999987543 24578889988876 787765 2322112346677889999999987
Q ss_pred HHH
Q 012815 313 LIG 315 (456)
Q Consensus 313 ll~ 315 (456)
++.
T Consensus 111 ~l~ 113 (247)
T 3tdn_A 111 AVE 113 (247)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 427
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=85.95 E-value=8.6 Score=38.35 Aligned_cols=69 Identities=13% Similarity=0.185 Sum_probs=52.0
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEeCCCCCCCHHHHHHHHHHHHHhC
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGDGDNGYGNAMNVKRTVKGYIKAG 178 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD~DtGYG~~~nv~rtVk~l~~AG 178 (456)
.|+.+.++||+++=+-. |. ++.+.++.+++|++++ ++||.+|+..|| +..++.+.++.+.+.|
T Consensus 152 ~a~~~~~~Gf~~iKik~--------g~------~~~~~~e~v~avr~a~g~d~~l~vDan~~~-~~~~a~~~~~~l~~~~ 216 (379)
T 2rdx_A 152 ELARHRAAGYRQFQIKV--------GA------DWQSDIDRIRACLPLLEPGEKAMADANQGW-RVDNAIRLARATRDLD 216 (379)
T ss_dssp HHHHHHHTTCCEEEEEC--------CS------CHHHHHHHHHHHGGGSCTTCEEEEECTTCS-CHHHHHHHHHHTTTSC
T ss_pred HHHHHHHcCCCEEEEec--------cC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHHHHHHHHHhCC
Confidence 34445567999887631 21 4677888999999887 499999998888 4667778888888888
Q ss_pred ccEEEeCCC
Q 012815 179 FAGIILEDQ 187 (456)
Q Consensus 179 aaGI~IEDq 187 (456)
+ -||+-
T Consensus 217 i---~iE~P 222 (379)
T 2rdx_A 217 Y---ILEQP 222 (379)
T ss_dssp C---EEECC
T ss_pred e---EEeCC
Confidence 7 56864
No 428
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=85.69 E-value=9.1 Score=38.89 Aligned_cols=169 Identities=21% Similarity=0.216 Sum_probs=103.3
Q ss_pred eecccC----ChHHHHH--HHHhCCcEEEecchHHhhhhcccCCC-CCCCH--H-HHHHHHHHHHhcc-CCcEEEeC---
Q 012815 92 QGPACF----DALSAKL--VEKSGFSFCFTSGFSISAARLALPDT-GFISY--G-EMVDQGQLITQAV-SIPVIGDG--- 157 (456)
Q Consensus 92 v~pgay----DalSArl--~e~aGfdAI~vSG~avSas~lG~PD~-~~lt~--~-Eml~~~r~I~ra~-~iPVIaD~--- 157 (456)
.|||+| |-+-..+ +.++|.++|.+=|.--. ...|. +.-.+ + =+...++.|.+.+ ++-||.|.
T Consensus 63 SMPGv~r~sid~l~~~~~~~~~lGi~av~LFgv~~p----~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~VitDVcLc 138 (356)
T 3obk_A 63 SMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDD----ELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALD 138 (356)
T ss_dssp TSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCG----GGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSG
T ss_pred CCCCceEECHHHHHHHHHHHHHCCCCEEEEecCCCc----ccCCcccccccCCCChHHHHHHHHHHHCCCCEEEEeeccc
Confidence 578887 4333322 44569999887553101 11221 11111 2 2445677777776 47788884
Q ss_pred ---CCCC--------C---CHHHHHHHH---HHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHh
Q 012815 158 ---DNGY--------G---NAMNVKRTV---KGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 158 ---DtGY--------G---~~~nv~rtV---k~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~ 220 (456)
++|+ | |...+...+ -...+|||+-|-=-|- ++| ||.|++++-++
T Consensus 139 ~YT~HGHcGil~~~~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdM--------MDG-----------rV~aIR~aLd~ 199 (356)
T 3obk_A 139 PYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDM--------MDG-----------RVSAIRESLDM 199 (356)
T ss_dssp GGBTTCCSSCBCTTTCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSC--------CTT-----------HHHHHHHHHHH
T ss_pred cccCCCcceeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEecccc--------ccC-----------HHHHHHHHHHH
Confidence 3332 1 223344443 4455899988876663 444 45555555544
Q ss_pred hC-CCeEEEEecchhh-------------c--------------ccHHHHHHHHHHhHhcCCCEEEe-ccCCCHHHHHHH
Q 012815 221 SG-SDIVIVARTDSRQ-------------A--------------LSLEESLRRSRAFADAGADVLFI-DALASKEEMKAF 271 (456)
Q Consensus 221 ~G-~dfvIiARTDA~~-------------~--------------~~ldeAI~RakAy~eAGAD~Ifi-e~~~s~eei~~i 271 (456)
.| .+.-|.+-+--++ + ..-+||++.+..=.+-|||+|+| |+++-.+.++++
T Consensus 200 ~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~YLDIi~~v 279 (356)
T 3obk_A 200 EGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKI 279 (356)
T ss_dssp TTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHHH
T ss_pred CCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCcHHHHHHHH
Confidence 34 3677776652211 1 11589999999999999999999 789999999999
Q ss_pred HHhCCCCceeeee
Q 012815 272 CEISPLVPKMANM 284 (456)
Q Consensus 272 ~~~v~~vP~~~N~ 284 (456)
.+.+. +|+.+=.
T Consensus 280 k~~~~-~PvaaYq 291 (356)
T 3obk_A 280 REKSK-LPMVAYH 291 (356)
T ss_dssp HHHCS-SCEEEEE
T ss_pred HhcCC-CCEEEEE
Confidence 99876 7876443
No 429
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=85.65 E-value=2.5 Score=38.39 Aligned_cols=167 Identities=12% Similarity=0.023 Sum_probs=86.1
Q ss_pred HHHHHHhCCcEEEecchHHhhhhccc-CCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLAL-PDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~-PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
++.++++|.+.+.+-- .-|. +- .++ .-++.++.|++.++.|+.+|. ..-++. +.++.+.++|++
T Consensus 22 ~~~~~~~G~~~i~~~~------~dg~~~~--~~~--~g~~~i~~i~~~~~~~~~v~l--~v~d~~---~~i~~~~~~gad 86 (220)
T 2fli_A 22 LARIEETDAEYVHIDI------MDGQFVP--NIS--FGADVVASMRKHSKLVFDCHL--MVVDPE---RYVEAFAQAGAD 86 (220)
T ss_dssp HHHHHHTTCCEEEEEE------EBSSSSS--CBC--BCHHHHHHHHTTCCSEEEEEE--ESSSGG---GGHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEEEe------ecCCCCC--ccc--cCHHHHHHHHHhCCCCEEEEE--eecCHH---HHHHHHHHcCCC
Confidence 5667778998875441 0121 11 112 224566677777778887762 222432 245788889999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
+|++-+... -..++.++.+ ++ .|..+.+-. +... . .++.++|. .++|.|++-
T Consensus 87 ~v~vh~~~~------------~~~~~~~~~~---~~----~g~~i~~~~--~~~t--~----~e~~~~~~-~~~d~vl~~ 138 (220)
T 2fli_A 87 IMTIHTEST------------RHIHGALQKI---KA----AGMKAGVVI--NPGT--P----ATALEPLL-DLVDQVLIM 138 (220)
T ss_dssp EEEEEGGGC------------SCHHHHHHHH---HH----TTSEEEEEE--CTTS--C----GGGGGGGT-TTCSEEEEE
T ss_pred EEEEccCcc------------ccHHHHHHHH---HH----cCCcEEEEE--cCCC--C----HHHHHHHH-hhCCEEEEE
Confidence 997733310 0112222232 21 132222222 1111 1 12344554 458988553
Q ss_pred cC--------CC---HHHHHHHHHhCC----CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHH
Q 012815 261 AL--------AS---KEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316 (456)
Q Consensus 261 ~~--------~s---~eei~~i~~~v~----~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~a 316 (456)
+. .. .+.++++.+..+ .+|+. ..||-+| -+..++.+.|...+..+..++.+
T Consensus 139 ~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~----v~GGI~~-~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 139 TVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIE----VDGGVDN-KTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEE----EESSCCT-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred EECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEE----EECcCCH-HHHHHHHHcCCCEEEEChHHhCC
Confidence 21 11 234454444321 23432 2345554 57788999999999999887765
No 430
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=85.62 E-value=3.6 Score=42.99 Aligned_cols=99 Identities=20% Similarity=0.274 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 162 GNAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 162 G~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.+++.+.+.++++.+ .|...+||-- |. .+.++-+++|+|++++. +++-| +.|+......+
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~------~~~~~Di~rv~avRea~----pd~~L--~vDaN~~w~~~ 259 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKG-------GV------MPGAEEMEAIAAIKARF----PHARV--TLDPNGAWSLN 259 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEEC-------SS------SCHHHHHHHHHHHHHHC----TTSEE--EEECTTBBCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeC-------CC------CCHHHHHHHHHHHHHhC----CCCeE--EeeCCCCCCHH
Confidence 357888888888887 6999999932 22 13455578999888874 45443 45888888899
Q ss_pred HHHHHHHHhHhcCCCEEEeccCC---C----HHHHHHHHHhCCCCceeee
Q 012815 241 ESLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (456)
+|++.++++.+. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 260 ~Ai~~~~~Le~~---l~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 305 (470)
T 3p0w_A 260 EAIALCKGQGHL---VAYAEDPCGPEAGYSGREVMAEFKRATG-IPTATN 305 (470)
T ss_dssp HHHHHHTTCTTT---CSEEESCBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHHhcccc---ceeecCCCChhhccchHHHHHHHHhcCC-CCEEeC
Confidence 999999999875 56888752 2 467889998877 787764
No 431
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=85.58 E-value=0.93 Score=43.69 Aligned_cols=68 Identities=19% Similarity=0.084 Sum_probs=51.8
Q ss_pred HHHHHHHHhHhcCCCEEEeccC--CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 241 ESLRRSRAFADAGADVLFIDAL--ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~--~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+.++-|++|.+.||+.+.+--+ .+.+.+++++++++ +|+.+ ++|-+ ..+.+++- .|+.+|+++..++.
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i~~~~~-~pv~v----gGGir-~~~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGPNNDDAAREALQESP-QFLQV----GGGIN-DTNCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESSSCHHHHHHHHHHST-TTSEE----ESSCC-TTTHHHHT-TTCSCEEECGGGBC
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCCCHHHHHHHHhcCC-ceEEE----eCCCC-HHHHHHHh-cCCCEEEECcHHHh
Confidence 3468899999999998887433 47789999999876 56542 34444 34888888 99999999887654
No 432
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.45 E-value=3.6 Score=42.68 Aligned_cols=157 Identities=13% Similarity=0.066 Sum_probs=88.9
Q ss_pred HHHHHHHHhCCCc--eeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh---ccCCc
Q 012815 78 AKSLRQILELPGV--HQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIP 152 (456)
Q Consensus 78 a~~Lr~ll~~~~~--lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r---a~~iP 152 (456)
...++.+.+.+.. +......+.--...+.++|.+.|-+.- +.|-.. -. -....+.+|.++.+..+++ ..++.
T Consensus 90 ~~~~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~~V~i~~-s~Sd~~-~~-~~l~~s~~e~l~~~~~~v~~ak~~G~~ 166 (423)
T 3ivs_A 90 RQDCEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVDVVI-GTSQYL-RK-YSHGKDMTYIIDSATEVINFVKSKGIE 166 (423)
T ss_dssp HHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEEEEE-EC---------------CHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHhcCCCCEEEEeeccChhhHHHHHHcCCCEEEEEe-eccHHH-HH-HHcCCCHHHHHHHHHHHHHHHHHCCCE
Confidence 3456665543322 222222333334556678999776651 111111 11 1122466777766555443 34688
Q ss_pred EEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEec
Q 012815 153 VIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVART 231 (456)
Q Consensus 153 VIaD~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiART 231 (456)
|.++++++|. ++..+.+.++.+.++|+.-|.|-|.+ | +..++++.+.|++.++.- +.++-+=...
T Consensus 167 V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTv-----G------~~~P~~v~~lv~~l~~~~---~~~i~~H~Hn 232 (423)
T 3ivs_A 167 VRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTV-----G------CATPRQVYDLIRTLRGVV---SCDIECHFHN 232 (423)
T ss_dssp EEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETT-----S------CCCHHHHHHHHHHHHHHC---SSEEEEEEBC
T ss_pred EEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCcc-----C------cCCHHHHHHHHHHHHhhc---CCeEEEEECC
Confidence 9999999986 56788999999999999999999986 3 334556666776665431 2222222222
Q ss_pred chhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 232 DSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 232 DA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
| +.-|+.-+.+..+|||+.|
T Consensus 233 d------~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 233 D------TGMAIANAYCALEAGATHI 252 (423)
T ss_dssp T------TSCHHHHHHHHHHTTCCEE
T ss_pred C------CchHHHHHHHHHHhCCCEE
Confidence 2 2235666777888999955
No 433
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=85.39 E-value=1.5 Score=43.93 Aligned_cols=85 Identities=20% Similarity=0.237 Sum_probs=64.4
Q ss_pred HHHHHHhCccEEEeCCC-CCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012815 171 VKGYIKAGFAGIILEDQ-VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (456)
Q Consensus 171 Vk~l~~AGaaGI~IEDq-~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy 249 (456)
++.++++|+.+|-+-|- ..--..|+.+ ...++.+|++..+++++++. ++..|++=-|.--. +.+.+.+-++.|
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD-~~~vt~~em~~~~~~I~r~~----~~~PviaD~d~Gyg-~~~~v~~tv~~l 125 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPD-FGLLTTTEVVEATRRITAAA----PNLCVVVDGDTGGG-GPLNVQRFIREL 125 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCS-SSCSCHHHHHHHHHHHHHHS----SSSEEEEECTTCSS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCC-CCCCCHHHHHHHHHHHHhhc----cCCCEEEeCCCCCC-CHHHHHHHHHHH
Confidence 35677899999999883 3212246654 35789999999999988774 25777876665322 567889999999
Q ss_pred HhcCCCEEEecc
Q 012815 250 ADAGADVLFIDA 261 (456)
Q Consensus 250 ~eAGAD~Ifie~ 261 (456)
.++||.+|-+|.
T Consensus 126 ~~aGaagv~iED 137 (318)
T 1zlp_A 126 ISAGAKGVFLED 137 (318)
T ss_dssp HHTTCCEEEEEC
T ss_pred HHcCCcEEEECC
Confidence 999999999986
No 434
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=85.34 E-value=8.4 Score=38.39 Aligned_cols=133 Identities=19% Similarity=0.346 Sum_probs=86.5
Q ss_pred CCcEEEeCCCCCCC--HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 150 SIPVIGDGDNGYGN--AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 150 ~iPVIaD~DtGYG~--~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
.+|+.+- .|+++ .....+.++++.+.|...+++- .|. +.++-+++|++++++. |+++.|
T Consensus 131 ~vp~~~~--~g~~~~~~~~~~~~a~~~~~~G~~~~KiK-------vG~-------~~~~d~~~v~avr~a~---g~~~~l 191 (372)
T 3cyj_A 131 EVPVYGS--GGFTSYPLRRLQEQLGGWAAAGIPRVKMK-------VGR-------EPEKDPERVRAAREAI---GESVEL 191 (372)
T ss_dssp SEEEEEE--CCCTTSCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------SGGGHHHHHHHHHHHH---CTTSEE
T ss_pred CceEEEE--cCCCCCCHHHHHHHHHHHHHcCCCEEEEc-------CCC-------CHHHHHHHHHHHHHHh---CCCCeE
Confidence 4666553 34443 3567778888888999999982 232 3344577888887764 556544
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCC-CceeeeeeccCCCCCCCCHHHHHh--
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPL-VPKMANMLEGGGKTPILNPLELEE-- 301 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~-vP~~~N~~~~~g~tp~lt~~eL~e-- 301 (456)
|-|+......++|++.+++..+.+ +..|+|-+ .+.+.++++.+.++. +|+... .. ..+..++.+
T Consensus 192 --~vDaN~~~~~~~a~~~~~~l~~~~-~i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~d-----E~--~~~~~~~~~~~ 261 (372)
T 3cyj_A 192 --MVDANGAYTRKQALYWAGAFAREA-GISYLEEPVSSEDREGLRLLRDRGPGGVAIAAG-----EY--EWTLPQLHDLA 261 (372)
T ss_dssp --EEECTTCSCHHHHHHHHHHHHHHH-CCCEEECSSCTTCHHHHHHHHHHSCTTCEEEEC-----TT--CCSHHHHHHHH
T ss_pred --EEECCCCCCHHHHHHHHHHHHhhc-CCcEEECCCCcccHHHHHHHHHhCCCCCCEECC-----CC--ccCHHHHHHHh
Confidence 458877778999999999988861 35688864 367888999988763 466543 11 234444444
Q ss_pred cCCCEEeccc
Q 012815 302 LGFKLVAYPL 311 (456)
Q Consensus 302 lGv~~Vs~p~ 311 (456)
-.++.+..-+
T Consensus 262 ~a~d~i~ik~ 271 (372)
T 3cyj_A 262 GCVDILQADV 271 (372)
T ss_dssp TTCSEEEECT
T ss_pred CCCCEEecCc
Confidence 3466666533
No 435
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=85.25 E-value=24 Score=34.23 Aligned_cols=135 Identities=13% Similarity=0.037 Sum_probs=86.0
Q ss_pred ChHHHHHHHHhCCcEEEec-ch-HH-hhhhcccCCCCCCCHHHHHHHHHHHHhc---cCCcEE------EeCCC-CCCCH
Q 012815 98 DALSAKLVEKSGFSFCFTS-GF-SI-SAARLALPDTGFISYGEMVDQGQLITQA---VSIPVI------GDGDN-GYGNA 164 (456)
Q Consensus 98 DalSArl~e~aGfdAI~vS-G~-av-Sas~lG~PD~~~lt~~Eml~~~r~I~ra---~~iPVI------aD~Dt-GYG~~ 164 (456)
+.-..+.+-++|++.|.+. +. -. .-..++ .|++|.++.++.+++. .++.|- .+.++ |+-++
T Consensus 85 ~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~------~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~ 158 (302)
T 2ftp_A 85 NLKGFEAALESGVKEVAVFAAASEAFSQRNIN------CSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDP 158 (302)
T ss_dssp SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHS------SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCH
T ss_pred CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhC------CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCH
Confidence 5555566677899988764 21 11 101122 4899999888877653 357764 34443 34467
Q ss_pred HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHH
Q 012815 165 MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (456)
Q Consensus 165 ~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~ 244 (456)
+.+.+.++.+.++|+..|.|-|.. |. ..+++..+.|++.++... +..+.+=+..|.- -++.
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~DT~-----G~------~~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~G------la~A 219 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLGDTI-----GV------GTAGATRRLIEAVASEVP--RERLAGHFHDTYG------QALA 219 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESS-----SC------CCHHHHHHHHHHHTTTSC--GGGEEEEEBCTTS------CHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC-----CC------cCHHHHHHHHHHHHHhCC--CCeEEEEeCCCcc------HHHH
Confidence 889999999999999999999875 22 345677777777765431 1234443433442 2356
Q ss_pred HHHHhHhcCCCEE
Q 012815 245 RSRAFADAGADVL 257 (456)
Q Consensus 245 RakAy~eAGAD~I 257 (456)
-..+..++||+.|
T Consensus 220 n~laAv~aGa~~v 232 (302)
T 2ftp_A 220 NIYASLLEGIAVF 232 (302)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHhCCCEE
Confidence 6777788999876
No 436
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=85.20 E-value=3.9 Score=40.71 Aligned_cols=136 Identities=17% Similarity=0.134 Sum_probs=85.9
Q ss_pred HHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHh---ccCCcEEEeCCC---CCC-CHHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQ---AVSIPVIGDGDN---GYG-NAMNVKRTVKG 173 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~r---a~~iPVIaD~Dt---GYG-~~~nv~rtVk~ 173 (456)
-...+.++|.+.+-+.... |- .+.. ..-..+.+|.++.++.+.+ ..++.|.+++++ ++- ++..+.+.++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~-s~-~~~~-~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKG-SL-HHLE-KQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEH 177 (337)
T ss_dssp HHHHHHHHTCCEEEEEEEC-SH-HHHH-HHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEec-CH-HHHH-HHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHH
Confidence 4555667899987665211 10 1111 1112478888887777654 346889999877 422 46778899999
Q ss_pred HHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcC
Q 012815 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG 253 (456)
Q Consensus 174 l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAG 253 (456)
+.++|+.-|.|-|.. | +..+++..+.|++.++... +..+-+=...|. --|+.-+.+..+||
T Consensus 178 ~~~~Ga~~i~l~DT~-----G------~~~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd~------GlA~AN~laAv~aG 238 (337)
T 3ble_A 178 LSKEHIERIFLPDTL-----G------VLSPEETFQGVDSLIQKYP--DIHFEFHGHNDY------DLSVANSLQAIRAG 238 (337)
T ss_dssp HHTSCCSEEEEECTT-----C------CCCHHHHHHHHHHHHHHCT--TSCEEEECBCTT------SCHHHHHHHHHHTT
T ss_pred HHHcCCCEEEEecCC-----C------CcCHHHHHHHHHHHHHhcC--CCeEEEEecCCc------chHHHHHHHHHHhC
Confidence 999999999999986 2 3345677777777765531 112222222222 23466677778999
Q ss_pred CCEEE
Q 012815 254 ADVLF 258 (456)
Q Consensus 254 AD~If 258 (456)
|+.|=
T Consensus 239 a~~vd 243 (337)
T 3ble_A 239 VKGLH 243 (337)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99764
No 437
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=85.14 E-value=12 Score=36.16 Aligned_cols=164 Identities=16% Similarity=0.014 Sum_probs=92.7
Q ss_pred cccccccCCCcccccccc---HHHHHHHHHhC-CCceeecccCCh------HHHHHHHHhCCcEEEecchHHhhhhcccC
Q 012815 59 NRTRVYRKNSTGVEACLS---PAKSLRQILEL-PGVHQGPACFDA------LSAKLVEKSGFSFCFTSGFSISAARLALP 128 (456)
Q Consensus 59 ~~~R~y~~~s~~~~~a~~---~a~~Lr~ll~~-~~~lv~pgayDa------lSArl~e~aGfdAI~vSG~avSas~lG~P 128 (456)
|+.=.+.-||....+..+ +.+-++...+. ++ ++.|+-.. --|+.++++|+|++.+..-
T Consensus 32 Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P---------- 99 (286)
T 2r91_A 32 GVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPP---------- 99 (286)
T ss_dssp TCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS----------
T ss_pred CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC----------
Confidence 333345557776655333 23333433332 23 44444432 2356677789999987631
Q ss_pred CCCC-CCHHHHHHHHHHHHhccCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccC
Q 012815 129 DTGF-ISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVS 203 (456)
Q Consensus 129 D~~~-lt~~Eml~~~r~I~ra~~iPVIa-D~D--tGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp 203 (456)
-... .+-+++.+|-+.|++++++||+. +.+ +|+- .++.+.+ .-.+.|||-... .
T Consensus 100 ~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~------~pnivgiKds~g-------d-------- 158 (286)
T 2r91_A 100 YYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE------LGCIRGVKDTNE-------S-------- 158 (286)
T ss_dssp CSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH------HSCEEEEEECCS-------C--------
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh------cCCEEEEEeCCC-------C--------
Confidence 1112 47899999999999999999875 766 3543 3334443 347888885332 1
Q ss_pred HHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHh
Q 012815 204 REEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (456)
Q Consensus 204 ~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (456)
..++...++ . +++|.|..=.|... .....+|++..+--.- --++.+.++.+.
T Consensus 159 ----~~~~~~~~~-~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~an~~P~~~~~l~~a 211 (286)
T 2r91_A 159 ----LAHTLAYKR-Y---LPQARVYNGSDSLV-----------FASFAVRLDGVVASSANYLPELLAGIRDA 211 (286)
T ss_dssp ----HHHHHHHHH-H---CTTSEEEECCGGGH-----------HHHHHTTCSEECCGGGTTCHHHHHHHHHH
T ss_pred ----HHHHHHHHh-c---CCCEEEEEccHHHH-----------HHHHHcCCCEEEecHHHhCHHHHHHHHHH
Confidence 223333333 1 35787776666542 2344589998764321 234566666654
No 438
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.06 E-value=6.3 Score=37.16 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=47.1
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI 182 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI 182 (456)
+.++++|.+.|.++- | .+ ++..+.+++.+++||++=..-+-.+.+++.+.++.+.++||+|+
T Consensus 173 ~~a~~~Gad~i~~~~----------~----~~----~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 173 RLGAELGADIVKTSY----------T----GD----IDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp HHHHHTTCSEEEECC----------C----SS----HHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEECC----------C----CC----HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 788899999888871 1 12 34556777777899998432222246788888889999999999
Q ss_pred Ee
Q 012815 183 IL 184 (456)
Q Consensus 183 ~I 184 (456)
.+
T Consensus 235 ~v 236 (273)
T 2qjg_A 235 AV 236 (273)
T ss_dssp EC
T ss_pred Ee
Confidence 98
No 439
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=85.01 E-value=2.1 Score=39.07 Aligned_cols=94 Identities=19% Similarity=0.216 Sum_probs=55.6
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCC-CCCCCHHHHHHHHHHHHhccC-CcEEE
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPD-TGFISYGEMVDQGQLITQAVS-IPVIG 155 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD-~~~lt~~Eml~~~r~I~ra~~-iPVIa 155 (456)
...+++.+.. .++...+++...++.+.+.|++.+.+|..--+ ...++ .....+ ...+.+++.++ +||++
T Consensus 107 ~~~~~~~~g~--~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t---~~~~~~~~~~~~----~~l~~~~~~~~~~pvia 177 (227)
T 2tps_A 107 AKEVRAAIGD--MILGVSAHTMSEVKQAEEDGADYVGLGPIYPT---ETKKDTRAVQGV----SLIEAVRRQGISIPIVG 177 (227)
T ss_dssp HHHHHHHHTT--SEEEEEECSHHHHHHHHHHTCSEEEECCSSCC---CSSSSCCCCCTT----HHHHHHHHTTCCCCEEE
T ss_pred HHHHHHhcCC--cEEEEecCCHHHHHHHHhCCCCEEEECCCcCC---CCCCCCCCccCH----HHHHHHHHhCCCCCEEE
Confidence 3445554432 34444568888888888899999998642211 11222 122232 34455666666 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCC
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQ 187 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq 187 (456)
+. |- +++| ++++.++|++||.+=-.
T Consensus 178 ~G--GI-~~~n----v~~~~~~Ga~gv~vgs~ 202 (227)
T 2tps_A 178 IG--GI-TIDN----AAPVIQAGADGVSMISA 202 (227)
T ss_dssp ES--SC-CTTT----SHHHHHTTCSEEEESHH
T ss_pred Ec--CC-CHHH----HHHHHHcCCCEEEEhHH
Confidence 72 22 2444 44566789999988443
No 440
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=85.00 E-value=7.3 Score=38.49 Aligned_cols=101 Identities=21% Similarity=0.287 Sum_probs=68.0
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.++++.+.+.++ +.|...+||-= |.. |. +.++-+++|++++++. |+++.+ |.|+......+
T Consensus 78 ~~~~e~~~~~~~---~~G~~~~KiKv-------g~~-g~---~~~~d~~~v~avR~~~---G~~~~L--~vDaN~~w~~~ 138 (327)
T 2opj_A 78 AVGPEEAARIVA---SSGCTTAKVKV-------AER-GQ---SEANDVARVEAVRDAL---GPRGRV--RIDVNGAWDVD 138 (327)
T ss_dssp SCCHHHHHHHHH---HHCCSEEEEEC-------CC----------CHHHHHHHHHHHH---CTTSEE--EEECTTCSCHH
T ss_pred CCCHHHHHHHHH---HCCCCEEEEEe-------CCC-CC---CHHHHHHHHHHHHHHh---CCCCEE--EEECCCCCCHH
Confidence 345665544443 57999999832 211 11 1233477888887764 566443 56888888899
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHhCCCCceeee
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~v~~vP~~~N 283 (456)
+|++.++++.+. +..|+|-+ ++.+.++++.+..+ +|+.+.
T Consensus 139 ~A~~~~~~L~~~--~l~~iEqP~~~~~~~~~l~~~~~-iPIa~d 179 (327)
T 2opj_A 139 TAVRMIRLLDRF--ELEYVEQPCATVDELAEVRRRVS-VPIAAD 179 (327)
T ss_dssp HHHHHHHHHGGG--CEEEEECCSSSHHHHHHHHHHCS-SCEEC-
T ss_pred HHHHHHHHHHhc--CCcEEeCCCCCHHHHHHHHhhCC-CCEEcC
Confidence 999999999886 57799874 57788999998876 777643
No 441
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=84.97 E-value=2.3 Score=40.75 Aligned_cols=125 Identities=16% Similarity=0.145 Sum_probs=76.0
Q ss_pred HHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecch----hhcccHHHHHHHHHHh
Q 012815 174 YIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDS----RQALSLEESLRRSRAF 249 (456)
Q Consensus 174 l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA----~~~~~ldeAI~RakAy 249 (456)
.++.||+=|-|=+.. ..+| ++|.-..++.++.. .+..+.+..++-|--. +....++.-.+..+.+
T Consensus 17 A~~~GAdRIELc~~L------~~GG--lTPS~g~i~~~~~~---~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~ 85 (224)
T 2bdq_A 17 LDKAIISRVELCDNL------AVGG--TTPSYGVIKEANQY---LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRA 85 (224)
T ss_dssp CCTTTCCEEEEEBCG------GGTC--BCCCHHHHHHHHHH---HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCCc------ccCC--cCCCHHHHHHHHHh---hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHH
Confidence 345677777664432 1122 56654444333211 1222456777777522 1234577778889999
Q ss_pred HhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCC---CCCCCCHHHHHhcCCCEEecc
Q 012815 250 ADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGG---KTPILNPLELEELGFKLVAYP 310 (456)
Q Consensus 250 ~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g---~tp~lt~~eL~elGv~~Vs~p 310 (456)
.++|||.+++-.+ -+.+.++++.+...+.|+.+.+- +.- .-|.-..++|.++||+||...
T Consensus 86 ~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRA-FD~~~~~d~~~ale~L~~lGv~rILTS 153 (224)
T 2bdq_A 86 VELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMA-FDVIPKSDQKKSIDQLVALGFTRILLH 153 (224)
T ss_dssp HHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGG-GGGSCTTTHHHHHHHHHHTTCCEEEEC
T ss_pred HHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECc-hhccCCcCHHHHHHHHHHcCCCEEECC
Confidence 9999999998765 36788888887655556554432 211 112223688999999999974
No 442
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=84.78 E-value=1.3 Score=41.66 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=49.3
Q ss_pred HHHHHHHhHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 242 SLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
.++.+++|.++|||.|.+-.+ ...+.++++++.+. +|+.++ ++-...-..+++.+.|+..|+.+..+
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~-iPvi~~----ggi~~~~~i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADKALAASVF 106 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC-SCEEEE----SCCCSTHHHHHHHHHTCSEEECCCCC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCcHhhhhHHH
Confidence 467899999999999987432 23678888888775 787653 23222234677888999999999877
Q ss_pred H
Q 012815 314 I 314 (456)
Q Consensus 314 l 314 (456)
+
T Consensus 107 ~ 107 (266)
T 2w6r_A 107 H 107 (266)
T ss_dssp -
T ss_pred H
Confidence 6
No 443
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=84.60 E-value=2.2 Score=42.21 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=62.3
Q ss_pred HHHHHHhCccEEEeCCC-CCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHh
Q 012815 171 VKGYIKAGFAGIILEDQ-VSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAF 249 (456)
Q Consensus 171 Vk~l~~AGaaGI~IEDq-~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy 249 (456)
++.+.++|+.+|-+-|. ..--..|+.+. ..++.+|++..++++..+.. .-|++=-|.--..+.+.+.+-++.|
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~-~~vt~~em~~~~~~I~~~~~-----~PviaD~d~Gyg~~~~~~~~~v~~l 103 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDL-GISTLDDVLTDIRRITDVCS-----LPLLVDADIGFGSSAFNVARTVKSM 103 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSS-SCSCHHHHHHHHHHHHHHCC-----SCEEEECTTCSSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCC-CCCCHHHHHHHHHHHHhhCC-----CCEEecCCcccCCCHHHHHHHHHHH
Confidence 45677899999999887 22123466542 47899999999999887753 3356644443222567888899999
Q ss_pred HhcCCCEEEecc
Q 012815 250 ADAGADVLFIDA 261 (456)
Q Consensus 250 ~eAGAD~Ifie~ 261 (456)
.++||++|-+|.
T Consensus 104 ~~aGa~gv~iEd 115 (295)
T 1xg4_A 104 IKAGAAGLHIED 115 (295)
T ss_dssp HHHTCSEEEEEC
T ss_pred HHcCCeEEEECC
Confidence 999999999986
No 444
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=84.49 E-value=14 Score=37.36 Aligned_cols=139 Identities=15% Similarity=0.105 Sum_probs=95.3
Q ss_pred cHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhh-------hcccC---CCCCCCHHHHHHHHHHH
Q 012815 76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALP---DTGFISYGEMVDQGQLI 145 (456)
Q Consensus 76 ~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas-------~lG~P---D~~~lt~~Eml~~~r~I 145 (456)
..-+.|++.-++-+..++-.+||.-++..+++.|.+++-++|.-+... ..|.| .+|.-|++|+...++.|
T Consensus 91 e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i 170 (349)
T 2wqp_A 91 EDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEII 170 (349)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHH
Confidence 334566666667788999999999999999999999999998765432 34766 46778999998877766
Q ss_pred Hh-------------------------------cc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCc
Q 012815 146 TQ-------------------------------AV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGC 193 (456)
Q Consensus 146 ~r-------------------------------a~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~C 193 (456)
.. .+ ++|| +|-|+.-|.+.. ...+.+||. .||=-..|.+-
T Consensus 171 ~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~-----~AAvAlGA~--iIEkH~tld~a 242 (349)
T 2wqp_A 171 REAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC-----LGAVALGGS--ILERHFTDRMD 242 (349)
T ss_dssp HHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH-----HHHHHHTCC--EEEEEBCSCTT
T ss_pred HHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH-----HHHHHhCCC--EEEeCCCcccc
Confidence 43 25 6787 577777664322 334568998 56754433221
Q ss_pred -cCCCCccccCHHHHHHHHHHHHHHhHhhC
Q 012815 194 -GHTRGRKVVSREEAVMRIKAAVDARKESG 222 (456)
Q Consensus 194 -GH~~gk~lvp~ee~v~kI~AA~~Ar~~~G 222 (456)
+-.+++.-+.++|+.+-++.++.....+|
T Consensus 243 ~~G~D~~~SL~p~ef~~lv~~ir~~~~alG 272 (349)
T 2wqp_A 243 RPGPDIVCSMNPDTFKELKQGAHALKLARG 272 (349)
T ss_dssp CCSTTGGGCBCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCChhhhCCHHHHHHHHHHHHHHHHHhC
Confidence 11244556677788777777777666665
No 445
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=84.49 E-value=4.2 Score=42.18 Aligned_cols=98 Identities=17% Similarity=0.263 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHH
Q 012815 163 NAMNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEE 241 (456)
Q Consensus 163 ~~~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~lde 241 (456)
+++.+.+.++++.+ .|...+||-- |.. +.++-+++|++++++. +++.| +.|+......++
T Consensus 185 ~~e~~~~~a~~~~~~~Gf~~~KlKv-------G~~------~~~~Di~~v~avRea~----pd~~L--~vDaN~~w~~~~ 245 (455)
T 3pfr_A 185 DTQAVIELAAASKDRYGFKDFKLKG-------GVF------EGSKEIDTVIELKKHF----PDARI--TLDPNGCWSLDE 245 (455)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEEC-------SSS------CHHHHHHHHHHHHHHC----TTCCE--EEECTTBSCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcC-------CCC------CHHHHHHHHHHHHHhC----CCCeE--eecCCCCCCHHH
Confidence 57788888888776 6999999942 221 3455678999888874 34333 458888888999
Q ss_pred HHHHHHHhHhcCCCEEEeccCC---C----HHHHHHHHHhCCCCceeee
Q 012815 242 SLRRSRAFADAGADVLFIDALA---S----KEEMKAFCEISPLVPKMAN 283 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~~---s----~eei~~i~~~v~~vP~~~N 283 (456)
|++.++++.+. ..|+|-+- + .+.++++.+..+ +|+..+
T Consensus 246 A~~~~~~L~~~---l~~iEeP~~~~d~~~~~~~~~~l~~~~~-iPIa~d 290 (455)
T 3pfr_A 246 AIQLCKGLNDV---LTYAEDPCIGENGYSGREIMAEFRRRTG-IPTATN 290 (455)
T ss_dssp HHHHHTTCTTT---CSEEESCBCCBTTBCHHHHHHHHHHHHC-CCEEES
T ss_pred HHHHHHhhccc---ceeeecCCChhhccchHHHHHHHHhcCC-CCEEeC
Confidence 99999999775 56888752 2 467889998877 787765
No 446
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=84.46 E-value=20 Score=39.52 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=86.9
Q ss_pred HHHHHHh--CCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCC--CCCC-HHH-HHHHHHHHH
Q 012815 102 AKLVEKS--GFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDN--GYGN-AMN-VKRTVKGYI 175 (456)
Q Consensus 102 Arl~e~a--GfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~Dt--GYG~-~~n-v~rtVk~l~ 175 (456)
|+.+.++ |++.|=++|.+.--+.++++. .-++ |.+..++.....+.+-...-+.+ ||-. +.+ +.+.++...
T Consensus 131 a~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~--e~p~-e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~ 207 (718)
T 3bg3_A 131 APYVAHNFSKLFSMENWGGATFDVAMRFLY--ECPW-RRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAK 207 (718)
T ss_dssp HHHHHHHCTTCSEEEEEETTHHHHHHHTSC--CCHH-HHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEecCCcchhhccccCC--CCHH-HHHHHHHHHcccchHHHHhcccccccccccCCcchHHHHHHHH
Confidence 4556667 576687763332111233332 2233 33333333222222323344544 4443 455 578889999
Q ss_pred HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE--ec----chh-hcccHHHHHHHHHH
Q 012815 176 KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA--RT----DSR-QALSLEESLRRSRA 248 (456)
Q Consensus 176 ~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA--RT----DA~-~~~~ldeAI~RakA 248 (456)
++|+..|+|=|.. .| +++++..+++.++.|. .+..+ -| |.. .....+..++-+++
T Consensus 208 ~~Gvd~irIf~s~-----n~------------l~~l~~~i~~ak~~G~-~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~ 269 (718)
T 3bg3_A 208 ENGMDVFRVFDSL-----NY------------LPNMLLGMEAAGSAGG-VVEAAISYTGDVADPSRTKYSLQYYMGLAEE 269 (718)
T ss_dssp HHTCCEEEEECSS-----CC------------HHHHHHHHHHHHTTTS-EEEEEEECCSCTTCTTCCTTCHHHHHHHHHH
T ss_pred hcCcCEEEEEecH-----HH------------HHHHHHHHHHHHHcCC-eEEEEEEeeccccCCCCCCCCHHHHHHHHHH
Confidence 9999999998753 22 2355555555554452 22222 23 322 23478899999999
Q ss_pred hHhcCCCEEEecc---CCCHHHHHH----HHHhCCCCc
Q 012815 249 FADAGADVLFIDA---LASKEEMKA----FCEISPLVP 279 (456)
Q Consensus 249 y~eAGAD~Ifie~---~~s~eei~~----i~~~v~~vP 279 (456)
..++|||.|.+.- .-.++++.+ +.+++|.+|
T Consensus 270 l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~ 307 (718)
T 3bg3_A 270 LVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLP 307 (718)
T ss_dssp HHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCC
T ss_pred HHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCe
Confidence 9999999998863 344555444 445565444
No 447
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=84.35 E-value=3.2 Score=41.23 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=42.6
Q ss_pred HHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 246 SRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 246 akAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
++...++|||.|.++... .+++++.++.+.+ ... +...||-+ .-+..++.+.|+..++.|..
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~~-~v~--ieaSGGI~-~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVTEG-RAV--LEVSGGVN-FDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHHTT-SEE--EEEESSCS-TTTHHHHHHTTCSEEECGGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhCC-CCe--EEEEcCCC-HHHHHHHHHcCCCEEEECCe
Confidence 333455899999999864 4788888876532 111 12233443 36789999999999999864
No 448
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=84.04 E-value=2.2 Score=43.05 Aligned_cols=86 Identities=20% Similarity=0.170 Sum_probs=52.7
Q ss_pred cCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEE-EeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEE
Q 012815 149 VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGI-ILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVI 227 (456)
Q Consensus 149 ~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI-~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvI 227 (456)
..--||.|.+. .+.++.++++||++| -+| ..|+-..+.+|-..+.--+.+..|+ ++. ..+.+.
T Consensus 16 ~kgGvI~d~~~--------~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~---~av---~iPV~~ 79 (330)
T 2yzr_A 16 VKHGVVMDVTN--------VEQAQIAEEAGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIM---DAV---SIPVMA 79 (330)
T ss_dssp TTTSEEEEESS--------HHHHHHHHHHTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHH---HHC---SSCEEE
T ss_pred ccCCceeeCCH--------HHHHHHHHHcCCCEEEecC--CccccccCCcchhhcCCHHHHHHHH---Hhc---CCCeEE
Confidence 34457778666 556788999999999 445 2333333444533333334455554 332 246677
Q ss_pred EEecchhhcccHHHHHHHHHHhHhcCCCEEEe
Q 012815 228 VARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (456)
Q Consensus 228 iARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi 259 (456)
..|..- +..++.|+++|||+|-+
T Consensus 80 K~rig~---------~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 80 KCRIGH---------TTEALVLEAIGVDMIDE 102 (330)
T ss_dssp EEETTC---------HHHHHHHHHTTCSEEEE
T ss_pred EEeecc---------hHHHHHHHHcCCCEEeh
Confidence 777654 35588888999999974
No 449
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.94 E-value=1.5 Score=40.85 Aligned_cols=70 Identities=17% Similarity=0.216 Sum_probs=48.2
Q ss_pred HHHHHHHHhHhcCCCEEEeccCC--------CHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 241 ESLRRSRAFADAGADVLFIDALA--------SKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~~--------s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
+.++.+++|.++|||.|.+..+. ..+.++++++.++ +|+.++ ++-...-..+++.+.|+..|+++..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~----ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVG----GGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEe----CCCCCHHHHHHHHHcCCCEEEEChH
Confidence 45677899999999998765432 2456677777665 787765 2221112357788899999999887
Q ss_pred HHH
Q 012815 313 LIG 315 (456)
Q Consensus 313 ll~ 315 (456)
++.
T Consensus 106 ~l~ 108 (253)
T 1thf_D 106 AVE 108 (253)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 450
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=83.64 E-value=2.6 Score=42.79 Aligned_cols=97 Identities=19% Similarity=0.074 Sum_probs=58.3
Q ss_pred HHHHHHHHhC-CCceeeccc---CChHHHHHHHHhCCcEEEecchHH-hhh-----h------------cccCCCCCCCH
Q 012815 78 AKSLRQILEL-PGVHQGPAC---FDALSAKLVEKSGFSFCFTSGFSI-SAA-----R------------LALPDTGFISY 135 (456)
Q Consensus 78 a~~Lr~ll~~-~~~lv~pga---yDalSArl~e~aGfdAI~vSG~av-Sas-----~------------lG~PD~~~lt~ 135 (456)
.+.++++.+. +-|+++-++ .++-.|+.++++|+++|-+++.+= +.+ . .+..|.+.-+.
T Consensus 176 ~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~ 255 (368)
T 3vkj_A 176 LEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTA 255 (368)
T ss_dssp HHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHH
Confidence 4556666554 457777555 788999999999999999974321 100 0 12233332222
Q ss_pred HHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 136 GEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 136 ~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
+. +..+++++ ++|||+|.. ..+..++. +...+||++|.+
T Consensus 256 -~~---l~~v~~~~~~ipvia~GG--I~~~~d~~----kal~lGA~~v~i 295 (368)
T 3vkj_A 256 -AS---IMEVRYSVPDSFLVGSGG--IRSGLDAA----KAIALGADIAGM 295 (368)
T ss_dssp -HH---HHHHHHHSTTCEEEEESS--CCSHHHHH----HHHHHTCSEEEE
T ss_pred -HH---HHHHHHHcCCCcEEEECC--CCCHHHHH----HHHHcCCCEEEE
Confidence 22 23444455 499999843 33444444 334479999988
No 451
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=83.63 E-value=29 Score=34.35 Aligned_cols=149 Identities=11% Similarity=0.016 Sum_probs=88.5
Q ss_pred HHHHHHHHHhC--CCceeec---ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCC
Q 012815 77 PAKSLRQILEL--PGVHQGP---ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSI 151 (456)
Q Consensus 77 ~a~~Lr~ll~~--~~~lv~p---gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~i 151 (456)
..+.++++.+. +-++.+. +--..-..+.+.++|.+.+-+.- .++ | .+++...++. ++..++
T Consensus 69 ~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~-~~s-------~-----~~~~~~~i~~-ak~~G~ 134 (345)
T 1nvm_A 69 DLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVAT-HCT-------E-----ADVSKQHIEY-ARNLGM 134 (345)
T ss_dssp HHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEE-ETT-------C-----GGGGHHHHHH-HHHHTC
T ss_pred HHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEEE-ecc-------H-----HHHHHHHHHH-HHHCCC
Confidence 34456565543 2244443 43334445566678999887641 111 1 1333333333 344467
Q ss_pred cEEEeCCCCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 152 PVIGDGDNGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 152 PVIaD~DtGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
.+++.+.+.+. +++.+.+.++.+.++|+.-|.|-|.+ |. ..++++.+.|++.++.. +++.-|--.
T Consensus 135 ~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~-----G~------~~P~~v~~lv~~l~~~~---~~~~pi~~H 200 (345)
T 1nvm_A 135 DTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSG-----GA------MSMNDIRDRMRAFKAVL---KPETQVGMH 200 (345)
T ss_dssp EEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTT-----CC------CCHHHHHHHHHHHHHHS---CTTSEEEEE
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCc-----Cc------cCHHHHHHHHHHHHHhc---CCCceEEEE
Confidence 78888766655 56789999999999999999999986 32 23567777777776553 123333333
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 231 TDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 231 TDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
+=.. +--++.-+.+..+||||.|
T Consensus 201 ~Hn~----~G~avAn~laA~~aGa~~v 223 (345)
T 1nvm_A 201 AHHN----LSLGVANSIVAVEEGCDRV 223 (345)
T ss_dssp CBCT----TSCHHHHHHHHHHTTCCEE
T ss_pred ECCC----ccHHHHHHHHHHHcCCCEE
Confidence 2111 1124666777788999875
No 452
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=83.61 E-value=3.2 Score=41.06 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|-+...+.+.++++++.||+-|=|-.+. ...|-+-++.+|-.+|+.-++++-.+. +..|-- |....
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeS------TrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSI--DT~~~---- 113 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAES------TRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSV--DTRKP---- 113 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------------CCHHHHHHHHHHHHHTT--CSCEEE--ECSCH----
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCc------CCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEE--ECCCH----
Confidence 4345667778899999999999886542 112334566666677777777665432 333322 44332
Q ss_pred HHHHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+ -+++..++|||+|- +.+..+ +++..++++.. .|+.+
T Consensus 114 ~---Va~aAl~aGa~iINdVsg~~d-~~m~~v~a~~~-~~vVl 151 (294)
T 2dqw_A 114 E---VAEEALKLGAHLLNDVTGLRD-ERMVALAARHG-VAAVV 151 (294)
T ss_dssp H---HHHHHHHHTCSEEECSSCSCC-HHHHHHHHHHT-CEEEE
T ss_pred H---HHHHHHHhCCCEEEECCCCCC-hHHHHHHHHhC-CCEEE
Confidence 1 23344456999875 344434 57777777765 56543
No 453
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=83.52 E-value=5.5 Score=39.37 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|-+...+.+.++++++.||+-|=|-.+. -..|-+-++.+|-.+|+.-++++-.+. ++.|-- |....
T Consensus 42 ~~~~~~a~~~a~~~v~~GAdiIDIGgeS------TrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSI--DT~~~---- 107 (294)
T 2y5s_A 42 FLARDDALRRAERMIAEGADLLDIGGES------TRPGAPPVPLDEELARVIPLVEALRPL--NVPLSI--DTYKP---- 107 (294)
T ss_dssp --CTTHHHHHHHHHHHTTCSEEEEESSC------CSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEE--ECCCH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCc------CCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEE--ECCCH----
Confidence 4455678888899999999999886542 113445577777778887777766532 333322 44332
Q ss_pred HHHHHHHHhHhcCCCEEE-eccCCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDALASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~~~s~eei~~i~~~v~~vP~~~ 282 (456)
+ -+++..++||++|- +.+.. .+++..++++.. .|+.+
T Consensus 108 ~---Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~-~~vVl 145 (294)
T 2y5s_A 108 A---VMRAALAAGADLINDIWGFR-QPGAIDAVRDGN-SGLCA 145 (294)
T ss_dssp H---HHHHHHHHTCSEEEETTTTC-STTHHHHHSSSS-CEEEE
T ss_pred H---HHHHHHHcCCCEEEECCCCC-chHHHHHHHHhC-CCEEE
Confidence 1 23344456999996 44444 346777777765 56544
No 454
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=83.49 E-value=16 Score=37.42 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=95.3
Q ss_pred ccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhh-------hcccC---CCCCCCHHHHHHHHHH
Q 012815 75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAA-------RLALP---DTGFISYGEMVDQGQL 144 (456)
Q Consensus 75 ~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas-------~lG~P---D~~~lt~~Eml~~~r~ 144 (456)
...-+.|++.-++-+..++-.+||.-++.++++.|.+++-++|.-+... ..|.| .+|.-|++|+...++.
T Consensus 100 ~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~ 179 (385)
T 1vli_A 100 AEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRT 179 (385)
T ss_dssp GGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHH
Confidence 3445677777777889999999999999999999999999998765432 34766 4677899999888777
Q ss_pred HHh--------------------------------cc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC
Q 012815 145 ITQ--------------------------------AV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK 191 (456)
Q Consensus 145 I~r--------------------------------a~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK 191 (456)
|.. .+ ++|| +|-|..-|. .......+.+||. .||=-.-|.
T Consensus 180 i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~----~~~~~AAvAlGA~--iIEkHftld 252 (385)
T 1vli_A 180 IRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHP----TEAPCAAVRLGAK--LIEKHFTID 252 (385)
T ss_dssp HHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSS----SHHHHHHHHTTCS--EEEEEBCSC
T ss_pred HHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCc----hHHHHHHHHcCCC--EEEeCCCcc
Confidence 753 25 6787 678887773 1222335568998 667543332
Q ss_pred Cc-cCCCCccccCHHHHHHHHHHHHHHh
Q 012815 192 GC-GHTRGRKVVSREEAVMRIKAAVDAR 218 (456)
Q Consensus 192 ~C-GH~~gk~lvp~ee~v~kI~AA~~Ar 218 (456)
+- +-.+++.-+.++|+.+-++.++...
T Consensus 253 ra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 253 KNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp TTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred ccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 21 1124455566778877777777666
No 455
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=83.49 E-value=25 Score=35.68 Aligned_cols=145 Identities=11% Similarity=0.055 Sum_probs=82.7
Q ss_pred HHHHHhccCCcEEEeCCCCCCCH-HHHHHHHHHHH-HhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 142 GQLITQAVSIPVIGDGDNGYGNA-MNVKRTVKGYI-KAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 142 ~r~I~ra~~iPVIaD~DtGYG~~-~nv~rtVk~l~-~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
++.+.+. +.+|++|+=.| +. ..+...++.+. +.||+.|.+---. |.. -|++++++..
T Consensus 154 v~~lr~~-g~~VflDlK~~--DIgnTva~ya~a~~~~lgaD~vTVhp~~---------G~d---------sl~~a~~~~~ 212 (353)
T 2ffc_A 154 FDYLHHL-NVPTILDIKMN--DIGNTVKHYRKFIFDYLRSDSCTANIYM---------GTQ---------MLRDICLDEE 212 (353)
T ss_dssp HHHHHHH-TCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCTT---------CST---------THHHHHBCTT
T ss_pred HHHHHHc-CCcEEEEEecC--chHHHHHHHHHHHHHHcCCCEEEEeCCC---------CHH---------HHHHHHHHhc
Confidence 3444333 89999999876 43 34556666665 6999999995431 111 2333332111
Q ss_pred hhCC---CeEEEEecchhhc---------c--cH-HHHHHHHHHhH-------hcCCCEEEeccCCCHHHHHHHHHhCCC
Q 012815 220 ESGS---DIVIVARTDSRQA---------L--SL-EESLRRSRAFA-------DAGADVLFIDALASKEEMKAFCEISPL 277 (456)
Q Consensus 220 ~~G~---dfvIiARTDA~~~---------~--~l-deAI~RakAy~-------eAGAD~Ifie~~~s~eei~~i~~~v~~ 277 (456)
+. ..+|.++|-.... . .+ +.++++++.+- ..|....++ +..+.++++.+.+..+.
T Consensus 213 --~k~~~gV~VL~lTSN~~~~dlq~~~~~~g~~v~e~V~~~A~~~g~~~~~~~~~G~~g~VV-Gats~~el~~IR~~~~~ 289 (353)
T 2ffc_A 213 --CKRYYSTFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLHLEENGEFVGFVV-GANCYDEIKKIRELFPD 289 (353)
T ss_dssp --SCCBCEEEEEEECSSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCEEEEE-CTTCHHHHHHHHHHCTT
T ss_pred --CCCcceEEEehhcCCCCHHHHHHhhccCCCCHHHHHHHHHHHhCccccccCCCCCCCEEE-eCCCHHHHHHHHHhCCC
Confidence 23 6788889874211 1 23 44455555443 345444444 33566788888877654
Q ss_pred CceeeeeeccCCCCC-CCCHHHHHhcCCC------EEeccchHHH
Q 012815 278 VPKMANMLEGGGKTP-ILNPLELEELGFK------LVAYPLSLIG 315 (456)
Q Consensus 278 vP~~~N~~~~~g~tp-~lt~~eL~elGv~------~Vs~p~~ll~ 315 (456)
.+++ + ||-.+ .=+++++.+.|.. .++.+-..+.
T Consensus 290 ~~iL---t--PGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~ 329 (353)
T 2ffc_A 290 CYIL---A--PGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITK 329 (353)
T ss_dssp CCEE---E--CCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHT
T ss_pred CeEE---e--CcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcC
Confidence 3332 2 22211 1258888888987 7777776654
No 456
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.37 E-value=4.4 Score=39.35 Aligned_cols=88 Identities=16% Similarity=0.098 Sum_probs=58.9
Q ss_pred HHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCcEEEe
Q 012815 79 KSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIPVIGD 156 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iPVIaD 156 (456)
+.|.+..+.-+..++..++|.--+..+.++|++.|.+++.-. ++..++++ ..+++++.+ ++|||+
T Consensus 152 ~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l--------~~~~~dl~----~~~~l~~~v~~~~pvVa- 218 (272)
T 3qja_A 152 VSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDL--------MTLDVDRD----CFARIAPGLPSSVIRIA- 218 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCT--------TTCCBCTT----HHHHHGGGSCTTSEEEE-
T ss_pred HHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcc--------cccccCHH----HHHHHHHhCcccCEEEE-
Confidence 334444444567788899999888888889999998874211 11112222 345566665 699998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCccEEEe
Q 012815 157 GDNGYGNAMNVKRTVKGYIKAGFAGIIL 184 (456)
Q Consensus 157 ~DtGYG~~~nv~rtVk~l~~AGaaGI~I 184 (456)
+.|..+++++ +.+.++|++|+.+
T Consensus 219 -egGI~t~edv----~~l~~~GadgvlV 241 (272)
T 3qja_A 219 -ESGVRGTADL----LAYAGAGADAVLV 241 (272)
T ss_dssp -ESCCCSHHHH----HHHHHTTCSEEEE
T ss_pred -ECCCCCHHHH----HHHHHcCCCEEEE
Confidence 5676666554 5778899999988
No 457
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=83.36 E-value=2.4 Score=42.06 Aligned_cols=83 Identities=16% Similarity=0.244 Sum_probs=60.6
Q ss_pred HHHHHhCccEEEeCC-CCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhH
Q 012815 172 KGYIKAGFAGIILED-QVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFA 250 (456)
Q Consensus 172 k~l~~AGaaGI~IED-q~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~ 250 (456)
+.+.++|+.+|-+-| +..--..|+.+. .+++.+|++..++++.++. +.-|++=-|.-- .+.+.+.+-++.|.
T Consensus 36 ~l~e~aGf~ai~vs~~s~a~~~~G~pD~-~~vt~~em~~~~~~I~r~~-----~~PviaD~d~Gy-g~~~~v~~~v~~l~ 108 (298)
T 3eoo_A 36 KMAEAVGFKAVYLSGGGVAANSLGIPDL-GISTMDDVLVDANRITNAT-----NLPLLVDIDTGW-GGAFNIARTIRSFI 108 (298)
T ss_dssp HHHHHHTCSCEEECHHHHHHHTTCCCSS-SCCCHHHHHHHHHHHHHHC-----CSCEEEECTTCS-SSHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECcHHHHHHhcCCCCC-CCCCHHHHHHHHHHHHhhc-----CCeEEEECCCCC-CCHHHHHHHHHHHH
Confidence 456789999999988 332123466542 4789999999999887764 344666555422 25667888899999
Q ss_pred hcCCCEEEecc
Q 012815 251 DAGADVLFIDA 261 (456)
Q Consensus 251 eAGAD~Ifie~ 261 (456)
++||.+|-+|.
T Consensus 109 ~aGaagv~iED 119 (298)
T 3eoo_A 109 KAGVGAVHLED 119 (298)
T ss_dssp HTTCSEEEEEC
T ss_pred HhCCeEEEECC
Confidence 99999999996
No 458
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=83.30 E-value=1.7 Score=44.11 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=48.5
Q ss_pred HHHHHHhHhcCCCEEEe--cc-------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchH
Q 012815 243 LRRSRAFADAGADVLFI--DA-------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifi--e~-------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~l 313 (456)
.+.++.+.++|||.|.+ ++ +++.+.+.++.+.++ .|++++ ||-...-+..++-.+|.+.|..+..+
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~-~pVia~----GGI~~~~dv~kal~~GAdaV~iGr~~ 310 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTG-KPVLID----SGFRRGSDIVKALALGAEAVLLGRAT 310 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHC-SCEEEC----SSCCSHHHHHHHHHTTCSCEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcC-CeEEEE----CCCCCHHHHHHHHHhCCcHhhehHHH
Confidence 35688889999999999 32 234567777777776 466543 44332234566667999999999988
Q ss_pred HHHH
Q 012815 314 IGVS 317 (456)
Q Consensus 314 l~aa 317 (456)
+...
T Consensus 311 l~~~ 314 (380)
T 1p4c_A 311 LYGL 314 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 459
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=83.27 E-value=2.4 Score=42.70 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=54.1
Q ss_pred CCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHH----hccC---CcEEEeCCCC
Q 012815 88 PGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLIT----QAVS---IPVIGDGDNG 160 (456)
Q Consensus 88 ~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~----ra~~---iPVIaD~DtG 160 (456)
+-++++-|+.++-.|+.+.++|+|+|.+|..+..... +++.+ ++.-+.+..+...+ ..++ +|||+|. |
T Consensus 211 ~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~--~~~~g-~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G--G 285 (393)
T 2qr6_A 211 DVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSL--ALGME-VSMATAIADVAAARRDYLDETGGRYVHIIADG--S 285 (393)
T ss_dssp SSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHH--HTSCC-CCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS--S
T ss_pred CCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccc--cCCCC-CChHHHHHHHHHHHHHhHhhcCCcceEEEEEC--C
Confidence 4567778999999999999999999999731211111 12222 33333333333221 1133 9999983 3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCC
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILED 186 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IED 186 (456)
..+..++. ++..+||++|.+=-
T Consensus 286 I~~~~dv~----kalalGA~~V~iG~ 307 (393)
T 2qr6_A 286 IENSGDVV----KAIACGADAVVLGS 307 (393)
T ss_dssp CCSHHHHH----HHHHHTCSEEEECG
T ss_pred CCCHHHHH----HHHHcCCCEEEECH
Confidence 33444444 44458999999943
No 460
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=83.16 E-value=1.7 Score=40.18 Aligned_cols=70 Identities=10% Similarity=0.012 Sum_probs=50.4
Q ss_pred HHHHHHHHhHhcCCCEEEecc--------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 241 ESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
+.++.+++|.++|||.|.+.. ... +.++++++.+. +|+.++- +-.+|. ..+++.+.|+..|.++..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~-ipv~v~g---gi~~~~-~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD-VQVELSG---GIRDDE-SLAAALATGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS-SEEEEES---SCCSHH-HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC-CcEEEEC---CCCCHH-HHHHHHHcCCCEEEECch
Confidence 446778899999999998853 223 78889988876 7877651 112222 367888999999999987
Q ss_pred HHHH
Q 012815 313 LIGV 316 (456)
Q Consensus 313 ll~a 316 (456)
++..
T Consensus 106 ~l~~ 109 (244)
T 2y88_A 106 ALEN 109 (244)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 6653
No 461
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=83.10 E-value=3.7 Score=40.48 Aligned_cols=89 Identities=20% Similarity=0.254 Sum_probs=57.6
Q ss_pred HHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCC
Q 012815 81 LRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNG 160 (456)
Q Consensus 81 Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtG 160 (456)
++.+.+. +..+++.+.+.-.|+.++++|.|+|.+.|.. + -|+.. ...++ ..++.|.+.+++||+++. |
T Consensus 103 i~~l~~~-g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~-~---GG~~g-~~~~~----~ll~~i~~~~~iPViaaG--G 170 (332)
T 2z6i_A 103 MERFHEA-GIIVIPVVPSVALAKRMEKIGADAVIAEGME-A---GGHIG-KLTTM----TLVRQVATAISIPVIAAG--G 170 (332)
T ss_dssp HHHHHHT-TCEEEEEESSHHHHHHHHHTTCSCEEEECTT-S---SEECC-SSCHH----HHHHHHHHHCSSCEEEES--S
T ss_pred HHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEEECCC-C---CCCCC-CccHH----HHHHHHHHhcCCCEEEEC--C
Confidence 3333333 4555667778888999999999999997652 1 23322 11222 445667777899999973 4
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
..++.++. ++.++||+||.+=
T Consensus 171 I~~~~~~~----~al~~GAdgV~vG 191 (332)
T 2z6i_A 171 IADGEGAA----AGFMLGAEAVQVG 191 (332)
T ss_dssp CCSHHHHH----HHHHTTCSEEEEC
T ss_pred CCCHHHHH----HHHHcCCCEEEec
Confidence 44565554 4455899999883
No 462
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.04 E-value=26 Score=33.96 Aligned_cols=167 Identities=11% Similarity=0.055 Sum_probs=82.5
Q ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccc-----------cCHHHHHHHHHHHHHHhHh
Q 012815 152 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKV-----------VSREEAVMRIKAAVDARKE 220 (456)
Q Consensus 152 PVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~l-----------vp~ee~v~kI~AA~~Ar~~ 220 (456)
.+|.=.-.||-+.+...+.++.+.++||+.|.|-= .+ .-...+|..+ +..+...+-++..++..
T Consensus 21 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGi-Pf--SDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~-- 95 (271)
T 3nav_A 21 AFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGM-PF--SDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARN-- 95 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC-CC--CCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC-CC--CCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--
Confidence 34444456887788899999999999999987721 11 0001122211 12222233333333221
Q ss_pred hCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCH--HHHHHHHHhCCCCceeeeeeccCCCCCCCCHHH
Q 012815 221 SGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASK--EEMKAFCEISPLVPKMANMLEGGGKTPILNPLE 298 (456)
Q Consensus 221 ~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~--eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~e 298 (456)
...+++++.--......+++.- ++...+||+|.+.++.++-+ +++.+.++... +.... ++ .|. ++.=..++
T Consensus 96 ~~~Pivlm~Y~n~v~~~g~~~f---~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~g-l~~I~-lv-ap~-t~~eri~~ 168 (271)
T 3nav_A 96 PETPIGLLMYANLVYARGIDDF---YQRCQKAGVDSVLIADVPTNESQPFVAAAEKFG-IQPIF-IA-PPT-ASDETLRA 168 (271)
T ss_dssp TTSCEEEEECHHHHHHTCHHHH---HHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT-CEEEE-EE-CTT-CCHHHHHH
T ss_pred CCCCEEEEecCcHHHHHhHHHH---HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcC-CeEEE-EE-CCC-CCHHHHHH
Confidence 2346777744343334565444 45566899999999887643 35566666654 33221 22 121 21112345
Q ss_pred HHhcCCCEEec----cchHHHHH-HHHHHHHHHHHHc
Q 012815 299 LEELGFKLVAY----PLSLIGVS-VRAMQDALTAIKG 330 (456)
Q Consensus 299 L~elGv~~Vs~----p~~ll~aa-~~A~~~~l~~i~~ 330 (456)
+.+.+-..|-+ |.+..+.. -..+.+.++.+++
T Consensus 169 i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 169 VAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp HHHHCCSCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred HHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 55555444433 33333321 1235566677765
No 463
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=82.89 E-value=1.9 Score=40.09 Aligned_cols=69 Identities=12% Similarity=0.048 Sum_probs=49.6
Q ss_pred HHHHHHHHhHhcCCCEEEecc--------CCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 241 ESLRRSRAFADAGADVLFIDA--------LASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~--------~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
+.++.+++|.++|||.|.+.. ... +.++++++... +|+.++- +-.+|. ..+++.+.|+..|.++..
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~-ipv~v~g---gI~~~~-~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMD-IKVELSG---GIRDDD-TLAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCS-SEEEEES---SCCSHH-HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcC-CcEEEEC---CcCCHH-HHHHHHHcCCCEEEECch
Confidence 446778999999999998742 233 67888888876 7877652 112222 367788999999999887
Q ss_pred HHH
Q 012815 313 LIG 315 (456)
Q Consensus 313 ll~ 315 (456)
++.
T Consensus 107 ~l~ 109 (244)
T 1vzw_A 107 ALE 109 (244)
T ss_dssp HHH
T ss_pred Hhh
Confidence 665
No 464
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=82.87 E-value=3.4 Score=40.71 Aligned_cols=63 Identities=22% Similarity=0.199 Sum_probs=43.3
Q ss_pred HHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCC----CCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 244 RRSRAFADAGADVLFIDALASKEEMKAFCEISP----LVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~----~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
++++...++|||.|.++.+. .++++++++.+. .+|+. ..||-++ =+..++++.|+..++.+..
T Consensus 204 eea~eA~~aGaD~I~LDn~~-~e~l~~av~~l~~~~~~v~ie----ASGGIt~-eni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDNLS-PEEVKDISRRIKDINPNVIVE----VSGGITE-ENVSLYDFETVDVISSSRL 270 (285)
T ss_dssp HHHHHHHHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEE----EEECCCT-TTGGGGCCTTCCEEEEGGG
T ss_pred HHHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCceEE----EECCCCH-HHHHHHHHcCCCEEEEeHH
Confidence 44555577999999999864 467777776542 23332 2234433 5789999999999998763
No 465
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=82.85 E-value=3.8 Score=39.45 Aligned_cols=180 Identities=13% Similarity=0.121 Sum_probs=95.0
Q ss_pred ceeecccCChHHH------HHHHHhCCcEEEecchHHhhhhcc--cCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCC
Q 012815 90 VHQGPACFDALSA------KLVEKSGFSFCFTSGFSISAARLA--LPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNG 160 (456)
Q Consensus 90 ~lv~pgayDalSA------rl~e~aGfdAI~vSG~avSas~lG--~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtG 160 (456)
..+.|....+-.+ +.++++|.+.+.+== +-| .|.. ++. ...++.|.+.+ ++|+.+++ -
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDV------mDg~FVpni---t~G--~~~v~~lr~~~p~~~ldvHL--m 94 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDV------MDNHYVPNL---TFG--PMVLKALRDYGITAGMDVHL--M 94 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEE------EBSSSSSCB---CCC--HHHHHHHHHHTCCSCEEEEE--E
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEe------cCCCcCcch---hcC--HHHHHHHHHhCCCCeEEEEE--e
Confidence 4556654433332 445667887776531 011 2332 222 14456666667 78886554 3
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
.-++. +.++.+.++||+.|.+=... |-| ....+++ +++.... ..+.++--|..
T Consensus 95 v~~p~---~~i~~~~~aGAd~itvH~Ea----~~~--------~~~~i~~---ir~~G~k--~Gvalnp~Tp~------- 147 (246)
T 3inp_A 95 VKPVD---ALIESFAKAGATSIVFHPEA----SEH--------IDRSLQL---IKSFGIQ--AGLALNPATGI------- 147 (246)
T ss_dssp CSSCH---HHHHHHHHHTCSEEEECGGG----CSC--------HHHHHHH---HHTTTSE--EEEEECTTCCS-------
T ss_pred eCCHH---HHHHHHHHcCCCEEEEcccc----chh--------HHHHHHH---HHHcCCe--EEEEecCCCCH-------
Confidence 44553 35788999999999985432 111 2233333 3333211 12233222322
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-----------CCHHHHHHHHHhCC--CCceeeeeeccCCCCCCCCHHHHHhcCCCEE
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-----------ASKEEMKAFCEISP--LVPKMANMLEGGGKTPILNPLELEELGFKLV 307 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-----------~s~eei~~i~~~v~--~vP~~~N~~~~~g~tp~lt~~eL~elGv~~V 307 (456)
++.+.+.+ +.|.|.+-++ ...+.++++.+..+ +...++.+ .||-++ -+..++.++|++.+
T Consensus 148 ---e~l~~~l~-~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V--DGGI~~-~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 148 ---DCLKYVES-NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI--DGGVNP-YNIAEIAVCGVNAF 220 (246)
T ss_dssp ---GGGTTTGG-GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE--ESSCCT-TTHHHHHTTTCCEE
T ss_pred ---HHHHHHHh-cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE--ECCcCH-HHHHHHHHcCCCEE
Confidence 34455555 5898876332 12345555554321 11122222 245444 57899999999999
Q ss_pred eccchHHHH
Q 012815 308 AYPLSLIGV 316 (456)
Q Consensus 308 s~p~~ll~a 316 (456)
+.|..++.+
T Consensus 221 V~GSaIf~a 229 (246)
T 3inp_A 221 VAGSAIFNS 229 (246)
T ss_dssp EESHHHHTS
T ss_pred EEehHHhCC
Confidence 999877753
No 466
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=82.84 E-value=22 Score=33.60 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccE
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAG 181 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaG 181 (456)
|+..++.|++-+++--.. ++..|.+... +.++.|++.+.+|+-++ |+. .-.+.++.+.++||+=
T Consensus 37 a~~~~~~gad~lhvvDld--~a~~~~~~~~--------~~i~~i~~~~~~pl~vG-----GGI-rs~e~~~~~l~~Gadk 100 (243)
T 4gj1_A 37 FKEYEKAGAKELHLVDLT--GAKDPSKRQF--------ALIEKLAKEVSVNLQVG-----GGI-RSKEEVKALLDCGVKR 100 (243)
T ss_dssp HHHHHHHTCCEEEEEEHH--HHHCGGGCCH--------HHHHHHHHHCCSEEEEE-----SSC-CCHHHHHHHHHTTCSE
T ss_pred HHHHHHCCCCEEEEEecC--cccccchhHH--------HHHHHHHHhcCCCeEec-----ccc-ccHHHHHHHHHcCCCE
Q ss_pred EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE------ecchhhcccHHH-----HHHHHHHhH
Q 012815 182 IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA------RTDSRQALSLEE-----SLRRSRAFA 250 (456)
Q Consensus 182 I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA------RTDA~~~~~lde-----AI~RakAy~ 250 (456)
|.|--.. +..-.-..++....|...++.+ +---....+..+ +.+-++.+.
T Consensus 101 Vii~t~a-------------------~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~ 161 (243)
T 4gj1_A 101 VVIGSMA-------------------IKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYS 161 (243)
T ss_dssp EEECTTT-------------------TTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHH
T ss_pred EEEcccc-------------------ccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHh
Q ss_pred hcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012815 251 DAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314 (456)
Q Consensus 251 eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll 314 (456)
+.|+.-+++..+ ++.+.++++.+.++.+|+.+. ||-...-..++|+++ +.-++.+..++
T Consensus 162 ~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipvias----GGv~~~~Dl~~l~~~-~~gvivg~Al~ 228 (243)
T 4gj1_A 162 NKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQAS----GGVASLKDLENLKGI-CSGVIVGKALL 228 (243)
T ss_dssp TTTCCEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEE----SCCCSHHHHHHTTTT-CSEEEECHHHH
T ss_pred hcCCcEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEE----cCCCCHHHHHHHHcc-CchhehHHHHH
No 467
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=82.79 E-value=10 Score=37.20 Aligned_cols=103 Identities=21% Similarity=0.203 Sum_probs=66.8
Q ss_pred CCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHH
Q 012815 161 YGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLE 240 (456)
Q Consensus 161 YG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ld 240 (456)
|-+...+.+.+++|++.||+=|=|-.+. --+|-+-++.+|=.+|+.-+.++-.. .+..|= .|.+..
T Consensus 26 ~~~~~~a~~~a~~m~~~GAdiIDIGgeS------TRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iS--IDT~~~---- 91 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGADIIDVGGVS------TRPGHEMVTLEEELNRVLPVVEAIVG--FDVKIS--VDTFRS---- 91 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEESCC------CSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEE--EECSCH----
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCcc------CCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEE--EECCCH----
Confidence 5556778888899999999999886653 22344567888878888888877654 344333 344432
Q ss_pred HHHHHHHHhHhcCCCEEE-ecc-CCCHHHHHHHHHhCCCCceee
Q 012815 241 ESLRRSRAFADAGADVLF-IDA-LASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 241 eAI~RakAy~eAGAD~If-ie~-~~s~eei~~i~~~v~~vP~~~ 282 (456)
+=+++..++|||+|= |.+ ..+ .++.+++.... +|+.+
T Consensus 92 ---~Va~~al~aGa~iINDVs~g~~d-~~m~~~va~~~-~~~vl 130 (270)
T 4hb7_A 92 ---EVAEACLKLGVDMINDQWAGLYD-HRMFQIVAKYD-AEIIL 130 (270)
T ss_dssp ---HHHHHHHHHTCCEEEETTTTSSC-THHHHHHHHTT-CEEEE
T ss_pred ---HHHHHHHHhccceeccccccccc-hhHHHHHHHcC-CCeEE
Confidence 224555679999885 443 445 46666777665 56554
No 468
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=82.76 E-value=6.7 Score=39.56 Aligned_cols=101 Identities=28% Similarity=0.424 Sum_probs=73.1
Q ss_pred CCCH-HHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccH
Q 012815 161 YGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSL 239 (456)
Q Consensus 161 YG~~-~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~l 239 (456)
++++ ..+.+.++.+.+.|..+++|-- |. .+.++-+++|++++++. |+++.| +.|+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~G~~~~Kikv-------g~------~~~~~d~~~v~avR~~~---G~~~~l--~vDaN~~~~~ 222 (388)
T 4h83_A 161 YGEPLGSIADEMHNYQELGLAGVKFKV-------GG------LSAAEDAARITAAREAA---GDDFII--CIDANQGYKP 222 (388)
T ss_dssp TTCTTCSHHHHHHHHHHHTBSEEEEEC-------SS------SCHHHHHHHHHHHHHHH---CSSSEE--EEECTTCBCH
T ss_pred cCCCHHHHHHHHHHHHHcCCceEeecC-------CC------CCHHHHHHHHHHHHHhc---CCCeEE--EEecCcCCCH
Confidence 3443 5677888899999999999832 11 13455678888887765 567655 4588888899
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC-C---CHHHHHHHHHhCCCCceee
Q 012815 240 EESLRRSRAFADAGADVLFIDAL-A---SKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~-~---s~eei~~i~~~v~~vP~~~ 282 (456)
++|++.++++.+.+ ..|+|-+ + +.+.++++.+..+ +|+.+
T Consensus 223 ~~A~~~~~~l~~~~--~~~iEeP~~~~~d~~~~~~l~~~~~-ipIa~ 266 (388)
T 4h83_A 223 AVAVDLSRRIADLN--IRWFEEPVEWHNDKRSMRDVRYQGS-VPVCA 266 (388)
T ss_dssp HHHHHHHHHTTTSC--CCCEESCBCSTTHHHHHHHHHHHSS-SCEEE
T ss_pred HHHHHHHHHhhhcC--cceeecCcccccchHHHHHHHhhcC-CCccC
Confidence 99999999998874 5678764 2 3456788888876 77653
No 469
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=82.65 E-value=12 Score=37.48 Aligned_cols=148 Identities=16% Similarity=0.142 Sum_probs=89.9
Q ss_pred HHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEE----Eecchh--hcccHHHHH
Q 012815 170 TVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIV----ARTDSR--QALSLEESL 243 (456)
Q Consensus 170 tVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIi----ARTDA~--~~~~ldeAI 243 (456)
+|++.++.|++|+++==+..+ |.+ ...++.+.+..+++.+.+.|-.+++. .|.+.. ...+.+-..
T Consensus 133 sVe~AvrlGADaV~~l~~i~~-------Gs~--~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va 203 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINL-------SDA--GTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVI 203 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECT-------TCT--THHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECC-------CCh--hHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHH
Confidence 677778889999874211110 111 12567778888887777777777774 352221 113444445
Q ss_pred HHHHHhHhcCCC----EEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCC-C----HHHHHh-cCCCEEeccchH
Q 012815 244 RRSRAFADAGAD----VLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL-N----PLELEE-LGFKLVAYPLSL 313 (456)
Q Consensus 244 ~RakAy~eAGAD----~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~l-t----~~eL~e-lGv~~Vs~p~~l 313 (456)
.-++..+|.||| .|=++-+ +.++++++..+ +|++ + .++.++... . .++.-+ .|.+-+++|=.+
T Consensus 204 ~aaRiAaELGADs~~tivK~~y~---e~f~~Vv~a~~-vPVV--i-aGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNI 276 (307)
T 3fok_A 204 QSVAIAAGLGNDSSYTWMKLPVV---EEMERVMESTT-MPTL--L-LGGEGGNDPDATFASWEHALTLPGVRGLTVGRTL 276 (307)
T ss_dssp HHHHHHHTCSSCCSSEEEEEECC---TTHHHHGGGCS-SCEE--E-ECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTT
T ss_pred HHHHHHHHhCCCcCCCEEEeCCc---HHHHHHHHhCC-CCEE--E-eCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhh
Confidence 556677899999 8877654 57888888765 6654 3 344443211 1 244445 588888888776
Q ss_pred HH---HHHHHHHHHHHHHHcCCC
Q 012815 314 IG---VSVRAMQDALTAIKGGRI 333 (456)
Q Consensus 314 l~---aa~~A~~~~l~~i~~g~~ 333 (456)
+. .--.+|-+++..|-.+..
T Consensus 277 fQ~~~~dp~~~v~al~~iVH~~~ 299 (307)
T 3fok_A 277 LYPQDGDVAAAVDTAARLVHTDI 299 (307)
T ss_dssp SSCSSSCHHHHHHHHHHHHCCCC
T ss_pred ccCCCCCHHHHHHHHHHHHHhhH
Confidence 66 445566677777776554
No 470
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=82.55 E-value=14 Score=37.81 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=87.0
Q ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC------CccC----C-------CCccccCHH----HHH
Q 012815 150 SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK------GCGH----T-------RGRKVVSRE----EAV 208 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK------~CGH----~-------~gk~lvp~e----e~v 208 (456)
.+|+-+-. +..+++.+.+.++++.+.|...+||--+.... .+|+ . ......+.+ ..+
T Consensus 138 ~v~~y~~~--~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (426)
T 4e4f_A 138 GVMVYCHT--TGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTP 215 (426)
T ss_dssp SEEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHH
T ss_pred ceeEeEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 36665532 22357777888888888999999984221000 0010 0 000111222 235
Q ss_pred HHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeee
Q 012815 209 MRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANML 285 (456)
Q Consensus 209 ~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~ 285 (456)
++|+|++++. |+++-|.. |+......++|++-++++.++|.+. +|-+ .+.+.++++.+.++ +|+..+
T Consensus 216 e~v~avR~a~---G~d~~L~v--DaN~~~~~~~A~~~~~~L~~~~i~~--iEeP~~~~d~~~~~~l~~~~~-iPIa~d-- 285 (426)
T 4e4f_A 216 KLFEAVRDKF---GFNEHLLH--DMHHRLTPIEAARFGKSVEDYRLFW--MEDPTPAENQACFRLIRQHTV-TPIAVG-- 285 (426)
T ss_dssp HHHHHHHHHH---TTSSEEEE--ECTTCSCHHHHHHHHHHTGGGCCSE--EECCSCCSSGGGGHHHHTTCC-SCEEEC--
T ss_pred HHHHHHHHHh---CCCCEEEE--ECCCCCCHHHHHHHHHHHhhcCCCE--EECCCChHHHHHHHHHHhcCC-CCEEeC--
Confidence 6777776664 67777654 7777788999999999999998664 4543 24567888888876 777653
Q ss_pred ccCCCCCCCCHHHHHhcC-CCEEeccch
Q 012815 286 EGGGKTPILNPLELEELG-FKLVAYPLS 312 (456)
Q Consensus 286 ~~~g~tp~lt~~eL~elG-v~~Vs~p~~ 312 (456)
|. -...-...++-+.| +..|..-..
T Consensus 286 E~--~~~~~~~~~~i~~ga~d~v~~k~~ 311 (426)
T 4e4f_A 286 EV--FNSIWDCKQLIEEQLIDYIRTTIT 311 (426)
T ss_dssp TT--CCSGGGTHHHHHTTCCSEECCCTT
T ss_pred CC--cCCHHHHHHHHHcCCCCEEEeCcc
Confidence 11 11112345666666 555555433
No 471
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=82.52 E-value=13 Score=36.08 Aligned_cols=164 Identities=13% Similarity=0.062 Sum_probs=91.4
Q ss_pred ccccccCCCcccccccc---HHHHHHHHHhCCCceeecccCC--hH----HHHHHHHhCCcEEEecchHHhhhhcccCCC
Q 012815 60 RTRVYRKNSTGVEACLS---PAKSLRQILELPGVHQGPACFD--AL----SAKLVEKSGFSFCFTSGFSISAARLALPDT 130 (456)
Q Consensus 60 ~~R~y~~~s~~~~~a~~---~a~~Lr~ll~~~~~lv~pgayD--al----SArl~e~aGfdAI~vSG~avSas~lG~PD~ 130 (456)
+.=.+.-||....+..+ +.+-++...+.-.. ++.|+-. -- -|+.++++|+|++.+..- -.
T Consensus 34 v~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P----------~y 102 (293)
T 1w3i_A 34 IDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP----------YY 102 (293)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC----------CS
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC----------CC
Confidence 33345557766665333 23334444433221 4444433 22 244556679999887631 11
Q ss_pred CC-CCHHHHHHHHHHHHhccCCcEEE-eCC--CCCC-CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHH
Q 012815 131 GF-ISYGEMVDQGQLITQAVSIPVIG-DGD--NGYG-NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSRE 205 (456)
Q Consensus 131 ~~-lt~~Eml~~~r~I~ra~~iPVIa-D~D--tGYG-~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~e 205 (456)
.. .+-+++.+|-+.|++++++||+. +.+ +|+- .++.+.+ --.+.|||-... .
T Consensus 103 ~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~------~pnIvgiKds~g-------d---------- 159 (293)
T 1w3i_A 103 YPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE------IGCFTGVKDTIE-------N---------- 159 (293)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH------HCCEEEEEECCS-------C----------
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh------cCCEEEEEeCCC-------C----------
Confidence 12 47899999999999999999875 776 3543 3344443 247888885332 1
Q ss_pred HHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC-CCHHHHHHHHHh
Q 012815 206 EAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL-ASKEEMKAFCEI 274 (456)
Q Consensus 206 e~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~-~s~eei~~i~~~ 274 (456)
..++...++ . +++|.|..=.|... ..+..+|++.++--.- --++.+.++.+.
T Consensus 160 --~~~~~~~~~-~---~~~f~v~~G~d~~~-----------~~~l~~G~~G~is~~an~~P~~~~~l~~a 212 (293)
T 1w3i_A 160 --IIHTLDYKR-L---NPNMLVYSGSDMLI-----------ATVASTGLDGNVAAGSNYLPEVTVTIKKL 212 (293)
T ss_dssp --HHHHHHHHH-H---CTTSEEEECCSTTH-----------HHHHHTTCCEEECGGGGTCHHHHHHHHHH
T ss_pred --HHHHHHHHh-c---CCCEEEEEccHHHH-----------HHHHHcCCCEEEeCHHHhCHHHHHHHHHH
Confidence 223333333 2 35787776666542 1234579998764321 234566666654
No 472
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=82.37 E-value=3.3 Score=40.52 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=51.5
Q ss_pred HHHHHHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 242 SLRRSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 242 AI~RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
..+-|++|+++||++|-+-.- .+.+.++++.+.+. +|++.. ..-.+.....++.++|...|......+.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~-lPVl~K----dfi~d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACS-LPALRK----DFLFDPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSS-SCEEEE----SCCCSTHHHHHHHHTTCSEEEEETTTSC
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcC-CCEEEC----CccCCHHHHHHHHHcCCCEEEEcccccC
Confidence 367799999999999977321 46788999988876 787643 1223334678899999999999887653
No 473
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=82.33 E-value=9.6 Score=37.82 Aligned_cols=152 Identities=18% Similarity=0.037 Sum_probs=0.0
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
|+.+.++|++.|=+++.. .+-.++ +.+++|++.. +..+.+=.. ++...+.++++.+..+|+.
T Consensus 34 a~~L~~~Gv~~IE~g~p~-------------~~~~d~-e~v~~i~~~~~~~~i~~l~r---~~~~~i~~a~~al~~ag~~ 96 (325)
T 3eeg_A 34 AKALDELGVDVIEAGFPV-------------SSPGDF-NSVVEITKAVTRPTICALTR---AKEADINIAGEALRFAKRS 96 (325)
T ss_dssp HHHHHHHTCSEEEEECTT-------------SCHHHH-HHHHHHHHHCCSSEEEEECC---SCHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHcCCCEEEEeCCC-------------CCHhHH-HHHHHHHHhCCCCEEEEeec---CCHHHHHHHHHhhcccCCC
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
-|+|-+..++- |...+-=.+.+|..++++.+++.+++ .+.-+.-=.........+..++-++++.++|||.|.+.
T Consensus 97 ~v~i~~s~Sd~---~~~~~l~~s~~e~l~~~~~~v~~a~~--~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~ 171 (325)
T 3eeg_A 97 RIHTGIGSSDI---HIEHKLRSTRENILEMAVAAVKQAKK--VVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIP 171 (325)
T ss_dssp EEEEEEECSHH---HHC----CCCTTGGGTTHHHHHHHHT--TSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEEEEecccHH---HHHHHhCCCHHHHHHHHHHHHHHHHH--CCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEec
Q ss_pred ---cCCCHHHHHHHHHhC
Q 012815 261 ---ALASKEEMKAFCEIS 275 (456)
Q Consensus 261 ---~~~s~eei~~i~~~v 275 (456)
|.-.++++.++.+.+
T Consensus 172 DT~G~~~P~~v~~lv~~l 189 (325)
T 3eeg_A 172 DTTGYMLPWQYGERIKYL 189 (325)
T ss_dssp BSSSCCCHHHHHHHHHHH
T ss_pred CccCCcCHHHHHHHHHHH
No 474
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=82.32 E-value=31 Score=33.65 Aligned_cols=164 Identities=17% Similarity=0.216 Sum_probs=98.0
Q ss_pred hcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccC
Q 012815 124 RLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVS 203 (456)
Q Consensus 124 ~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp 203 (456)
++--|+.-.=+++++ +.+++++++||+- =|+=. ++-+++++ ..+||++|-|=-. +.+
T Consensus 82 VLTd~~~F~Gs~~~L----~~vr~~v~lPvLr-KDFii-d~yQI~eA----r~~GADaILLI~a-------------~L~ 138 (258)
T 4a29_A 82 ITTEEKYFNGSYETL----RKIASSVSIPILM-SDFIV-KESQIDDA----YNLGADTVLLIVK-------------ILT 138 (258)
T ss_dssp EECCSTTTCCCHHHH----HHHHTTCSSCEEE-ESCCC-SHHHHHHH----HHHTCSEEEEEGG-------------GSC
T ss_pred EeCCCCCCCCCHHHH----HHHHHhcCCCEee-ccccc-cHHHHHHH----HHcCCCeeehHHh-------------hcC
Confidence 444454333344443 5667788999986 24432 56566643 3579999988332 334
Q ss_pred HHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccC------CCHHHHHHHHHhCCC
Q 012815 204 REEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDAL------ASKEEMKAFCEISPL 277 (456)
Q Consensus 204 ~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~------~s~eei~~i~~~v~~ 277 (456)
.+++. ...+.+.++|-+.+|=..+.. | ++||. ++||++|=|-.- .+.+...++...+|.
T Consensus 139 ~~~l~----~l~~~A~~lGl~~LvEVh~~~-------E-l~rAl---~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~ 203 (258)
T 4a29_A 139 ERELE----SLLEYARSYGMEPLILINDEN-------D-LDIAL---RIGARFIGIMSRDFETGEINKENQRKLISMIPS 203 (258)
T ss_dssp HHHHH----HHHHHHHHTTCCCEEEESSHH-------H-HHHHH---HTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCT
T ss_pred HHHHH----HHHHHHHHHhHHHHHhcchHH-------H-HHHHh---cCCCcEEEEeCCCccccccCHHHHHHHHhhCCC
Confidence 44333 333444556777777555533 2 45543 579999987531 356677778777763
Q ss_pred CceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHHHHHHHHHHHHHHHHcCCC
Q 012815 278 VPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRI 333 (456)
Q Consensus 278 vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~aa~~A~~~~l~~i~~g~~ 333 (456)
-.+-+.+.|=.+| -+...|.+.|++-+..|-+++++. +..++|.+|.+
T Consensus 204 --~~~~VsESGI~t~-~dv~~l~~~G~~a~LVGealmr~~-----d~~~~Li~G~~ 251 (258)
T 4a29_A 204 --NVVKVAKLGISER-NEIEELRKLGVNAFLISSSLMRNP-----EKIKELIEGSL 251 (258)
T ss_dssp --TSEEEEEESSCCH-HHHHHHHHTTCCEEEECHHHHHCT-----THHHHHHC---
T ss_pred --CCEEEEcCCCCCH-HHHHHHHHCCCCEEEECHHHhCCC-----cHHHHHHcCch
Confidence 2223446532222 235678899999999999999853 45667776654
No 475
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=82.29 E-value=3.4 Score=41.48 Aligned_cols=86 Identities=24% Similarity=0.293 Sum_probs=52.4
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCC-CceeeeeeccCC
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPL-VPKMANMLEGGG 289 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~-vP~~~N~~~~~g 289 (456)
|..|+++.++..++..|..=+|. ++| ++...++|||.|.++.. +.++++++++.+.+ +++. ..||
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVdt-----lde----a~eAl~aGaD~I~LDn~-~~~~l~~av~~l~~~v~ie----aSGG 283 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETET-----LAE----LEEAISAGADIIMLDNF-SLEMMREAVKINAGRAALE----NSGN 283 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESS-----HHH----HHHHHHTTCSEEEEESC-CHHHHHHHHHHHTTSSEEE----EESS
T ss_pred HHHHHHHHHHhCCCCeEEEEECC-----HHH----HHHHHHcCCCEEEECCC-CHHHHHHHHHHhCCCCeEE----EECC
Confidence 44454444433344444444444 333 33345589999999986 45788988887642 2222 2234
Q ss_pred CCCCCCHHHHHhcCCCEEeccc
Q 012815 290 KTPILNPLELEELGFKLVAYPL 311 (456)
Q Consensus 290 ~tp~lt~~eL~elGv~~Vs~p~ 311 (456)
-++ -+..++.+.|+..++.|.
T Consensus 284 It~-~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 284 ITL-DNLKECAETGVDYISVGA 304 (320)
T ss_dssp CCH-HHHHHHHTTTCSEEECTH
T ss_pred CCH-HHHHHHHHcCCCEEEECc
Confidence 322 356889999999999976
No 476
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=82.27 E-value=19 Score=44.33 Aligned_cols=192 Identities=13% Similarity=0.038 Sum_probs=114.1
Q ss_pred HHHHHHHhCCCceee-c---ccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc--CCc
Q 012815 79 KSLRQILELPGVHQG-P---ACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV--SIP 152 (456)
Q Consensus 79 ~~Lr~ll~~~~~lv~-p---gayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~--~iP 152 (456)
.+|.+++. .-|++. | ++-++--|..+.++|.=++..+ .+.++.+++...++.+.+.. +.|
T Consensus 574 t~~t~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g-------------~g~~~~e~l~~~i~~vk~~~~~~~p 639 (2060)
T 2uva_G 574 TKMSRLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAG-------------GGYYNAQKMSDAISKIEKAIPPGRG 639 (2060)
T ss_dssp CHHHHHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEG-------------GGCCSHHHHHHHHHHHGGGSCTTCC
T ss_pred hhhhhccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECc-------------CCCCCHHHHHHHHHHHHhhcccCCC
Confidence 35677776 344432 2 3445555555666665443322 12457888888999998887 688
Q ss_pred EEEeCCCCCCCHH-HHHHHHHHHHHhCccE--EEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEE
Q 012815 153 VIGDGDNGYGNAM-NVKRTVKGYIKAGFAG--IILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVA 229 (456)
Q Consensus 153 VIaD~DtGYG~~~-nv~rtVk~l~~AGaaG--I~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiA 229 (456)
+.++.-.-.-... -..+.++.+++.|+.- |.+-- | +-+.|++.+.++.+ |..++.+
T Consensus 640 ~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~-----------G--~p~~e~~~~~l~~~-------gi~~i~~- 698 (2060)
T 2uva_G 640 ITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGA-----------G--VPSIEVANEYIQTL-------GIRHISF- 698 (2060)
T ss_dssp EEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEES-----------S--CCCHHHHHHHHHHS-------CCSEEEE-
T ss_pred eEecccccCcccchhHHHHHHHHHHcCCCcceEeecC-----------C--CCCHHHHHHHHHHc-------CCeEEEe-
Confidence 8888754211111 1446778888888876 54421 1 11445676666543 3333322
Q ss_pred ecchhhcccHHHHHHHHHHhHhcCCCEEE---eccC-----CC--------HHHHHHHHHhCCCCceeeeeeccCCCCCC
Q 012815 230 RTDSRQALSLEESLRRSRAFADAGADVLF---IDAL-----AS--------KEEMKAFCEISPLVPKMANMLEGGGKTPI 293 (456)
Q Consensus 230 RTDA~~~~~ldeAI~RakAy~eAGAD~If---ie~~-----~s--------~eei~~i~~~v~~vP~~~N~~~~~g~tp~ 293 (456)
..+..++++++.+.+++|+|+|+ ++|. .+ .+.+.++.+.+. +|++ ..||-...
T Consensus 699 ------v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~-ipvi----aaGGI~~g 767 (2060)
T 2uva_G 699 ------KPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSN-IVLV----AGSGFGGS 767 (2060)
T ss_dssp ------CCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTT-EEEE----EESSCCSH
T ss_pred ------cCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcC-CCEE----EeCCCCCH
Confidence 22447889999999999999999 6652 12 335566666654 5543 23343211
Q ss_pred CCHHHHH-----------hcCCCEEeccchHHHH
Q 012815 294 LNPLELE-----------ELGFKLVAYPLSLIGV 316 (456)
Q Consensus 294 lt~~eL~-----------elGv~~Vs~p~~ll~a 316 (456)
-....+- .||+.-|-.|..++.+
T Consensus 768 ~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t 801 (2060)
T 2uva_G 768 EDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTA 801 (2060)
T ss_dssp HHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGB
T ss_pred HHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcC
Confidence 2234455 6799999888876654
No 477
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=82.01 E-value=5.8 Score=40.20 Aligned_cols=127 Identities=13% Similarity=0.162 Sum_probs=79.4
Q ss_pred HHHHHHHHHhCccEEEeCCCCC---CCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHH
Q 012815 168 KRTVKGYIKAGFAGIILEDQVS---PKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLR 244 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~---pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~ 244 (456)
.+.++++.+.|...+||--... ...+|+.. --+.++-+++|++++++. |+++.|.. |+.....+++|++
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~---~~~~~~d~~~v~avR~a~---g~~~~l~v--DaN~~~~~~~A~~ 228 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAEKTRGQYIS---MPDLKSALEPFEKIRKAV---GDKMDIMV--EFHSMWQLLPAMQ 228 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCC---HHHHHHHHHHHHHHHHHH---GGGSEEEE--ECTTCBCHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccccccCcCC---HHHHHHHHHHHHHHHHHc---CCCceEEE--ECCCCCCHHHHHH
Confidence 4566788899999999942100 00122211 012455678888888775 45665544 6777778999999
Q ss_pred HHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH---HHHHhcC-CCEEeccch
Q 012815 245 RSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP---LELEELG-FKLVAYPLS 312 (456)
Q Consensus 245 RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~---~eL~elG-v~~Vs~p~~ 312 (456)
.++++.+.|.+ |+|-+ .+.+.++++.+..+ +|+.+. .. ..+. .++-+.| +..|..-..
T Consensus 229 ~~~~L~~~~i~--~iEeP~~~~~~~~~~~l~~~~~-iPIa~d-----E~--~~~~~~~~~~l~~~a~d~v~~d~~ 293 (400)
T 4dxk_A 229 IAKALTPYQTF--WHEDPIKMDSLSSLTRYAAVSP-APISAS-----ET--LGSRWAFRDLLETGAAGVVMLDIS 293 (400)
T ss_dssp HHHHTGGGCCS--EEECCBCTTSGGGHHHHHHHCS-SCEEEC-----TT--CCHHHHHHHHHHTTCCCEEEECTT
T ss_pred HHHHHhhcCCC--EEEcCCCcccHHHHHHHHHhCC-CCEEec-----CC--cCCHHHHHHHHHcCCCCEEEeCcc
Confidence 99999998755 55543 25678889988876 776643 21 1233 4444456 566655444
No 478
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.72 E-value=10 Score=40.56 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=48.6
Q ss_pred HHHHHHhHhcCCCEEEeccCCCHHHHHHHHHh----CCCCceeeeeec-cCCCCC-CCCH----HHHHhcCCCEEeccc
Q 012815 243 LRRSRAFADAGADVLFIDALASKEEMKAFCEI----SPLVPKMANMLE-GGGKTP-ILNP----LELEELGFKLVAYPL 311 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~~s~eei~~i~~~----v~~vP~~~N~~~-~~g~tp-~lt~----~eL~elGv~~Vs~p~ 311 (456)
-++++++.++|+|++++|.+++.+|++.+... ++.+|.++.+.- ..|++. .-++ ..+..+|+.-|-+-.
T Consensus 129 ~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC 207 (566)
T 1q7z_A 129 RETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINC 207 (566)
T ss_dssp HHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEEEES
T ss_pred HHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEEEeC
Confidence 45788999999999999999999998876642 356899988763 223322 2343 456677777665544
No 479
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=81.45 E-value=3.9 Score=41.54 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=60.7
Q ss_pred CCcEEEeCCCCCCCH-HHHHHHHHHHHH-hCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHH-HhHhhCCCeE
Q 012815 150 SIPVIGDGDNGYGNA-MNVKRTVKGYIK-AGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVD-ARKESGSDIV 226 (456)
Q Consensus 150 ~iPVIaD~DtGYG~~-~nv~rtVk~l~~-AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~-Ar~~~G~dfv 226 (456)
+.||++|+=.| +. ..+...++.+.+ .||+.|.+---. |.. -|+++++ .....|.+.+
T Consensus 151 g~~VflDlK~~--DIgnTv~~ya~a~~~~lgaD~vTVh~~~---------G~~---------sl~~a~~~~a~~~gkgv~ 210 (352)
T 2fds_A 151 NIPTMLDMKIN--DIGNTVKNYRKFIFEYLKSDSCTINVYM---------GTS---------MLKDICFDYEKNKYYSAY 210 (352)
T ss_dssp TCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCTT---------CST---------THHHHSEETTTTEECEEE
T ss_pred CCeEEEEeecC--chHHHHHHHHHHHHhhcCCCEEEEeCCC---------CHH---------HHHHHHHHHhhccCCceE
Confidence 89999999876 43 234455555555 799999985431 111 2333332 2222234688
Q ss_pred EEEecchhhcccHH-----------H-HHHHHHH-hHhcCCC------EEEeccCCCHHHHHHHHHhCCCCc
Q 012815 227 IVARTDSRQALSLE-----------E-SLRRSRA-FADAGAD------VLFIDALASKEEMKAFCEISPLVP 279 (456)
Q Consensus 227 IiARTDA~~~~~ld-----------e-AI~RakA-y~eAGAD------~Ifie~~~s~eei~~i~~~v~~vP 279 (456)
++|+|-......|. + ..+.+.. -.++|.| .+++.+ ++.++++.+.+..+..+
T Consensus 211 lLa~TSn~~~~dlq~~~~~~g~~l~~~v~~~v~~la~~~G~d~~~~~~GvVvGa-Ts~~e~~~iR~~~~~~~ 281 (352)
T 2fds_A 211 VLIKTTNKDSFIFQNELSINDKQAYIVMAEETQKMATDLKIDQNNEFIGFVVGS-NAFEEMKIIRNKFPDSY 281 (352)
T ss_dssp EEEECSSGGGHHHHTTCEETTEEHHHHHHHHHHHHHHHHTTGGGTCCEEEEECT-TCHHHHHHHHHHSTTCC
T ss_pred EEEEeCCcCHHHHHHhhccCCCcHHHHHHHHHHHHHHHhCCCccCCcceEEEcC-CCHHHHHHHHHhCCCCE
Confidence 99998543221221 1 2233322 2356665 666544 45678888877665433
No 480
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.44 E-value=26 Score=36.67 Aligned_cols=121 Identities=13% Similarity=0.086 Sum_probs=75.2
Q ss_pred HHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEEeC--CCCCC-CHHHHHHHHHHHHHhCc
Q 012815 103 KLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDG--DNGYG-NAMNVKRTVKGYIKAGF 179 (456)
Q Consensus 103 rl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIaD~--DtGYG-~~~nv~rtVk~l~~AGa 179 (456)
+.+.++|.+.+-+.... + |. ..+...++. ++..+..+.+++ .+|+- ++..+.+.++.++++||
T Consensus 107 ~~a~~~Gvd~i~if~~~-s-------d~-----~ni~~~i~~-ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 107 ERAVKNGMDVFRVFDAM-N-------DV-----RNMQQALQA-VKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHTTCCEEEECCTT-C-------CT-----HHHHHHHHH-HHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCcCEEEEEEec-C-------HH-----HHHHHHHHH-HHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 45567899987765311 1 11 223333333 334466776666 44543 57789999999999999
Q ss_pred cEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 180 AGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 180 aGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
.-|.|-|.. | +..++++.+.|++.++.. +..+-+=...|. .-|+.-..+..+||||.|
T Consensus 173 d~I~l~DT~-----G------~~~P~~v~~lv~~l~~~~---~~~i~~H~Hnd~------GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 173 DSIALKDMA-----G------ILTPYAAEELVSTLKKQV---DVELHLHCHSTA------GLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp SEEEEEETT-----S------CCCHHHHHHHHHHHHHHC---CSCEEEEECCTT------SCHHHHHHHHHHTTCSEE
T ss_pred CEEEEcCCC-----C------CcCHHHHHHHHHHHHHhc---CCeEEEEECCCC------ChHHHHHHHHHHhCCCEE
Confidence 999999986 2 334566777777776543 223333333333 124566777788999966
No 481
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=81.34 E-value=13 Score=38.42 Aligned_cols=146 Identities=12% Similarity=0.072 Sum_probs=82.7
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
|+.+.++|++.|=+++.. . -.++.+.++.|++.. ...+.+=. -.+. +-++...++|+.
T Consensus 67 a~~L~~~Gv~~IEvG~P~----------a----sp~d~~~~~~i~~~~~~~~v~~~~---r~~~----~di~~A~~aG~~ 125 (423)
T 3ivs_A 67 AKALDNFGVDYIELTSPV----------A----SEQSRQDCEAICKLGLKCKILTHI---RCHM----DDARVAVETGVD 125 (423)
T ss_dssp HHHHHHHTCSEEEECCTT----------S----CHHHHHHHHHHHTSCCSSEEEEEE---ESCH----HHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEEeecc----------c----CHHHHHHHHHHHhcCCCCEEEEee---ccCh----hhHHHHHHcCCC
Confidence 455778999999887421 1 133456667776543 23333200 0122 234667789999
Q ss_pred EEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 181 GIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 181 GI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
.|+|=-.+++ -|...+--.+.++..+++..+++..++.|.++.+.+ .|+. ....+..++-+++..++|||.|.+.
T Consensus 126 ~V~i~~s~Sd---~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~-eda~-r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 126 GVDVVIGTSQ---YLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS-EDSF-RSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp EEEEEEEC----------------CHHHHHHHHHHHHHHTTTCEEEEEE-ESGG-GSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEEeeccH---HHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-ccCc-CCCHHHHHHHHHHHHHhCCCccccC
Confidence 9999655432 122111123556777777777766666564433332 3443 2466788899999999999999875
Q ss_pred c---CCCHHHHHHHHH
Q 012815 261 A---LASKEEMKAFCE 273 (456)
Q Consensus 261 ~---~~s~eei~~i~~ 273 (456)
- .-.+.++.++.+
T Consensus 201 DTvG~~~P~~v~~lv~ 216 (423)
T 3ivs_A 201 DTVGCATPRQVYDLIR 216 (423)
T ss_dssp ETTSCCCHHHHHHHHH
T ss_pred CccCcCCHHHHHHHHH
Confidence 3 345566665554
No 482
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=81.15 E-value=7.5 Score=38.35 Aligned_cols=133 Identities=13% Similarity=0.163 Sum_probs=80.5
Q ss_pred HHHHHHHhCCcEEEecchH-H-hhhhcccCCCCCCCHHHHHHHHHHHHhcc---CCcEEEeCCC---CCCCHHHHHHHHH
Q 012815 101 SAKLVEKSGFSFCFTSGFS-I-SAARLALPDTGFISYGEMVDQGQLITQAV---SIPVIGDGDN---GYGNAMNVKRTVK 172 (456)
Q Consensus 101 SArl~e~aGfdAI~vSG~a-v-Sas~lG~PD~~~lt~~Eml~~~r~I~ra~---~iPVIaD~Dt---GYG~~~nv~rtVk 172 (456)
+++.++++|+.+|-+=+-. . -+.++|.+...+++.+|++..+++++++. +.-|++=-|. +.| ...+.+-.+
T Consensus 99 ~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g-~~~ai~Ra~ 177 (295)
T 1s2w_A 99 LVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWG-LDEALKRAE 177 (295)
T ss_dssp HHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCC-HHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcccc-HHHHHHHHH
Confidence 4556678999999886321 0 01234445567899999999999998764 3456664443 333 567777788
Q ss_pred HHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhc
Q 012815 173 GYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADA 252 (456)
Q Consensus 173 ~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eA 252 (456)
.|.+|||++|.+|-.. |..+.+.+|...+... .+.+++ =|. ..... ...+.+.
T Consensus 178 ay~eAGAd~i~~e~~~--------------~~~~~~~~i~~~~~~~----~P~i~~-~~~-~~~~~-------~~eL~~l 230 (295)
T 1s2w_A 178 AYRNAGADAILMHSKK--------------ADPSDIEAFMKAWNNQ----GPVVIV-PTK-YYKTP-------TDHFRDM 230 (295)
T ss_dssp HHHHTTCSEEEECCCS--------------SSSHHHHHHHHHHTTC----SCEEEC-CST-TTTSC-------HHHHHHH
T ss_pred HHHHcCCCEEEEcCCC--------------CCHHHHHHHHHHcCCC----CCEEEe-CCC-CCCCC-------HHHHHHc
Confidence 9999999999999532 1123345554443210 234333 121 11112 5577889
Q ss_pred CCCEEEecc
Q 012815 253 GADVLFIDA 261 (456)
Q Consensus 253 GAD~Ifie~ 261 (456)
|...|..+.
T Consensus 231 Gv~~v~~~~ 239 (295)
T 1s2w_A 231 GVSMVIWAN 239 (295)
T ss_dssp TCCEEEECS
T ss_pred CCcEEEECh
Confidence 999888765
No 483
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=81.10 E-value=19 Score=36.39 Aligned_cols=151 Identities=17% Similarity=0.092 Sum_probs=85.4
Q ss_pred HHHHHHH-HhCCcEEEec---chHHhhhh----ccc-CCC-CCCCHHH----HHHHHHHHHhccC-CcEEE-----eCCC
Q 012815 100 LSAKLVE-KSGFSFCFTS---GFSISAAR----LAL-PDT-GFISYGE----MVDQGQLITQAVS-IPVIG-----DGDN 159 (456)
Q Consensus 100 lSArl~e-~aGfdAI~vS---G~avSas~----lG~-PD~-~~lt~~E----ml~~~r~I~ra~~-iPVIa-----D~Dt 159 (456)
-.|+.+. ++|||+|=+- ||-+.-.. .-. -|. +..+++. +++.+++|+++++ -||.+ |.-.
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~ 257 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVH 257 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccc
Confidence 3677888 8999999875 33222110 011 332 2225543 3445566666664 47887 3111
Q ss_pred C--CCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhc
Q 012815 160 G--YGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA 236 (456)
Q Consensus 160 G--YG~-~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~ 236 (456)
+ -|. .....+.++.++++|++.|++-..... .. -+|. + +.+|+. + .+..++.+++-+
T Consensus 258 ~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-------~~-~~~~-~-~~~ir~---~---~~iPvi~~G~it---- 317 (379)
T 3aty_A 258 GMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV-------NQ-QIGD-V-VAWVRG---S---YSGVKISNLRYD---- 317 (379)
T ss_dssp GCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT-------SC-CCCC-H-HHHHHT---T---CCSCEEEESSCC----
T ss_pred cCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC-------CC-CccH-H-HHHHHH---H---CCCcEEEECCCC----
Confidence 1 133 356888899999999999999654311 01 1232 2 444432 2 234566666652
Q ss_pred ccHHHHHHHHHHhHhcC-CCEEEecc--CCCHHHHHHHHHhCC
Q 012815 237 LSLEESLRRSRAFADAG-ADVLFIDA--LASKEEMKAFCEISP 276 (456)
Q Consensus 237 ~~ldeAI~RakAy~eAG-AD~Ifie~--~~s~eei~~i~~~v~ 276 (456)
.+.+..+.+.| ||+|.+-- +.+++..+++.+..+
T Consensus 318 ------~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~ 354 (379)
T 3aty_A 318 ------FEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWP 354 (379)
T ss_dssp ------HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ------HHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCC
Confidence 24456666677 99998843 445567777776544
No 484
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=81.06 E-value=7.9 Score=38.49 Aligned_cols=67 Identities=16% Similarity=0.069 Sum_probs=53.7
Q ss_pred HHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE-eCCCCCCCHHHHHHHHHHHHHhCcc
Q 012815 104 LVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG-DGDNGYGNAMNVKRTVKGYIKAGFA 180 (456)
Q Consensus 104 l~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa-D~DtGYG~~~nv~rtVk~l~~AGaa 180 (456)
-..+.|.+.|-+++-+ +.|+...++.+|+++.++.+.+.+++||++ | -||++.=.+.++...++|+.
T Consensus 82 ~~v~~GAdiIDIg~~S------trP~~~~vs~eee~~vV~~v~~~~~vplsI~D----T~~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 82 KCVEYGADIVALRLVS------AHPDGQNRSGAELAEVCKAVADAIDVPLMIIG----CGVEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp HHHHTTCSEEEEECGG------GCTTTTCCCHHHHHHHHHHHHHHCSSCEEEEC----CSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHcCCcEEEEeCcc------CCCCCCCCCHHHHHHHHHHHHHhCCceEEEEC----CCCCCCCHHHHHHHHHhCCC
Confidence 3446899999999742 468877899999999999999989999999 8 35766555666777788885
No 485
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=80.99 E-value=7.9 Score=40.33 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=55.7
Q ss_pred cCCc-EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCC--------CccCCCCccccCHHHHHHHHHHHHHHhH
Q 012815 149 VSIP-VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPK--------GCGHTRGRKVVSREEAVMRIKAAVDARK 219 (456)
Q Consensus 149 ~~iP-VIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK--------~CGH~~gk~lvp~ee~v~kI~AA~~Ar~ 219 (456)
.++| |++=+--++ +.+++.+.++.++++|++||.+-...... ..|-..|+++.|. ..+-|+.++++.
T Consensus 295 ~~~P~V~vKispd~-~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~--sl~~i~~v~~~v- 370 (443)
T 1tv5_A 295 KKKPLVFVKLAPDL-NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDI--STKFICEMYNYT- 370 (443)
T ss_dssp SSCCEEEEEECSCC-CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHH--HHHHHHHHHHHT-
T ss_pred CCCCeEEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHH--HHHHHHHHHHHc-
Confidence 3688 887765544 34577888899999999999998764210 0111123333322 233343333332
Q ss_pred hhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEec
Q 012815 220 ESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFID 260 (456)
Q Consensus 220 ~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie 260 (456)
+.++-|++=-.-... +.+..+.++|||+|.+-
T Consensus 371 --~~~iPVIg~GGI~s~-------~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 371 --NKQIPIIASGGIFSG-------LDALEKIEAGASVCQLY 402 (443)
T ss_dssp --TTCSCEEEESSCCSH-------HHHHHHHHTTEEEEEES
T ss_pred --CCCCcEEEECCCCCH-------HHHHHHHHcCCCEEEEc
Confidence 234555554433322 33555566999999874
No 486
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=80.83 E-value=15 Score=34.17 Aligned_cols=107 Identities=13% Similarity=0.162 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHH
Q 012815 163 NAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEES 242 (456)
Q Consensus 163 ~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeA 242 (456)
+..+..+.++.+.+.|+..|.+-... . ...+ .|+..++. . +++.+-+-| -..
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~k~-------~------~~~~---~i~~l~~~---~-~~~~vgagt-vi~------- 77 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTLRT-------E------CAVD---AIRAIAKE---V-PEAIVGAGT-VLN------- 77 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEESCS-------T------THHH---HHHHHHHH---C-TTSEEEEES-CCS-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC-------h------hHHH---HHHHHHHH---C-cCCEEeeCE-EEE-------
Confidence 34567788899999999999997542 0 1122 33333322 2 367777766 322
Q ss_pred HHHHHHhHhcCCCEEEeccCCCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHH---HHHhcCCCEEec
Q 012815 243 LRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPL---ELEELGFKLVAY 309 (456)
Q Consensus 243 I~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~---eL~elGv~~Vs~ 309 (456)
-++++...++|||.|..++. + .++.+.++... +|.+..+ .|++ +..++|+..|-+
T Consensus 78 ~d~~~~A~~aGAd~v~~p~~-d-~~v~~~~~~~g-~~~i~G~---------~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 78 PQQLAEVTEAGAQFAISPGL-T-EPLLKAATEGT-IPLIPGI---------STVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHHHTCSCEEESSC-C-HHHHHHHHHSS-SCEEEEE---------SSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEcCCC-C-HHHHHHHHHhC-CCEEEec---------CCHHHHHHHHHCCCCEEEE
Confidence 26788888999999887753 3 46667777665 5554321 2444 455679998754
No 487
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=80.73 E-value=3.5 Score=37.18 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=49.8
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhcc-CCcEEEeCCCCCCCHHHH
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNV 167 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~-~iPVIaD~DtGYG~~~nv 167 (456)
+..++||+++.-.++.+.++|++.+-+-... ..| +..++.+.+.. ++||+++ |+..
T Consensus 104 g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~----~~g------------~~~~~~l~~~~~~~pvia~-----GGI~-- 160 (205)
T 1wa3_A 104 GVFYMPGVMTPTELVKAMKLGHTILKLFPGE----VVG------------PQFVKAMKGPFPNVKFVPT-----GGVN-- 160 (205)
T ss_dssp TCEEECEECSHHHHHHHHHTTCCEEEETTHH----HHH------------HHHHHHHHTTCTTCEEEEB-----SSCC--
T ss_pred CCcEECCcCCHHHHHHHHHcCCCEEEEcCcc----ccC------------HHHHHHHHHhCCCCcEEEc-----CCCC--
Confidence 4556677777777777888888877653211 011 35566777777 7999997 3221
Q ss_pred HHHHHHHHHhCccEEEeC
Q 012815 168 KRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IE 185 (456)
.++++.+.++||+|+.+=
T Consensus 161 ~~~~~~~~~~Ga~~v~vG 178 (205)
T 1wa3_A 161 LDNVCEWFKAGVLAVGVG 178 (205)
T ss_dssp TTTHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 246678889999999883
No 488
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=80.64 E-value=17 Score=34.71 Aligned_cols=175 Identities=18% Similarity=0.113 Sum_probs=98.3
Q ss_pred HHHHHHhCCCceeecccCChHHHHHH----HHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcEEE
Q 012815 80 SLRQILELPGVHQGPACFDALSAKLV----EKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG 155 (456)
Q Consensus 80 ~Lr~ll~~~~~lv~pgayDalSArl~----e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPVIa 155 (456)
++.+.+.+.+.+.+.-..|+-.|.-+ .+.|++.+=++-- -|+ -++.++.+++.+.-.++
T Consensus 26 ~~~~~l~~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~--------t~~--------a~e~I~~l~~~~~~~~i- 88 (232)
T 4e38_A 26 TINNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFR--------SDA--------AVEAIRLLRQAQPEMLI- 88 (232)
T ss_dssp HHHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT--------STT--------HHHHHHHHHHHCTTCEE-
T ss_pred HHHHHHHhCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCC--------CCC--------HHHHHHHHHHhCCCCEE-
Confidence 35555655566666666666554433 3347877766410 111 12455566665543344
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhh
Q 012815 156 DGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQ 235 (456)
Q Consensus 156 D~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~ 235 (456)
|.|...+ .+.++..+++||..|+.=. . +. +. ++++++. | ..++.= ..
T Consensus 89 ----GaGTVlt-~~~a~~Ai~AGA~fIvsP~---------~------~~-~v---i~~~~~~----g--i~~ipG--v~- 135 (232)
T 4e38_A 89 ----GAGTILN-GEQALAAKEAGATFVVSPG---------F------NP-NT---VRACQEI----G--IDIVPG--VN- 135 (232)
T ss_dssp ----EEECCCS-HHHHHHHHHHTCSEEECSS---------C------CH-HH---HHHHHHH----T--CEEECE--EC-
T ss_pred ----eECCcCC-HHHHHHHHHcCCCEEEeCC---------C------CH-HH---HHHHHHc----C--CCEEcC--CC-
Confidence 3454333 6677889999999997521 1 11 22 2333322 3 233321 11
Q ss_pred cccHHHHHHHHHHhHhcCCCEEEe-cc-C-CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccch
Q 012815 236 ALSLEESLRRSRAFADAGADVLFI-DA-L-ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS 312 (456)
Q Consensus 236 ~~~ldeAI~RakAy~eAGAD~Ifi-e~-~-~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ 312 (456)
..+| +.+..++|||.|-+ ++ . ...+.++.+...+|.+|.+ ..||-+| -+..++-++|...+..|..
T Consensus 136 --TptE----i~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~----ptGGI~~-~n~~~~l~aGa~~~vgGs~ 204 (232)
T 4e38_A 136 --NPST----VEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLM----PTGGITP-SNIDNYLAIPQVLACGGTW 204 (232)
T ss_dssp --SHHH----HHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEE----EBSSCCT-TTHHHHHTSTTBCCEEECG
T ss_pred --CHHH----HHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCee----eEcCCCH-HHHHHHHHCCCeEEEECch
Confidence 1223 33446899998733 43 2 2467888888877666654 3456554 4788999999877777776
Q ss_pred HHH
Q 012815 313 LIG 315 (456)
Q Consensus 313 ll~ 315 (456)
+..
T Consensus 205 l~~ 207 (232)
T 4e38_A 205 MVD 207 (232)
T ss_dssp GGC
T ss_pred hcC
Confidence 653
No 489
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.58 E-value=5 Score=38.43 Aligned_cols=70 Identities=17% Similarity=0.178 Sum_probs=51.9
Q ss_pred HHHHHHHHhHhcCCCEEEeccC-----CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccchHHH
Q 012815 241 ESLRRSRAFADAGADVLFIDAL-----ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315 (456)
Q Consensus 241 eAI~RakAy~eAGAD~Ifie~~-----~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~~ll~ 315 (456)
+-.+-|++|+++||++|-+-.. .+.+.++.+++.+. +|++. ++.-.+.....++.++|...|..+...+.
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~-lPvl~----kdfI~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD-LPLLR----KDFVVDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC-SCEEE----ESCCCSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcC-CCEEE----CCcCCCHHHHHHHHHcCCCEEEECccchH
Confidence 4468899999999999987432 36788999999876 77653 22223333457888999999999888665
No 490
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=80.54 E-value=33 Score=36.65 Aligned_cols=124 Identities=14% Similarity=0.073 Sum_probs=76.6
Q ss_pred HHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhccCCcE--EEeCCCCCC-CHHHHHHHHHHHHHhC
Q 012815 102 AKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPV--IGDGDNGYG-NAMNVKRTVKGYIKAG 178 (456)
Q Consensus 102 Arl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra~~iPV--IaD~DtGYG-~~~nv~rtVk~l~~AG 178 (456)
-..+.++|.+.+-+.... + |. ..+...++.+ +..+..+ .++..+|+. ++..+.+.++.++++|
T Consensus 123 ve~a~~aGvd~vrIf~s~-s-------d~-----~ni~~~i~~a-k~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G 188 (539)
T 1rqb_A 123 VDKSAENGMDVFRVFDAM-N-------DP-----RNMAHAMAAV-KKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMG 188 (539)
T ss_dssp HHHHHHTTCCEEEECCTT-C-------CT-----HHHHHHHHHH-HHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCEEEEEEeh-h-------HH-----HHHHHHHHHH-HHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcC
Confidence 355667899987765311 1 11 3333444443 3344555 567777754 5778999999999999
Q ss_pred ccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEE
Q 012815 179 FAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVL 257 (456)
Q Consensus 179 aaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~I 257 (456)
|.-|.|-|.. | +..+.++.+.|++.++...+ +..+-+=...|. --|+.-+.+..+||||.|
T Consensus 189 ad~I~L~DT~-----G------~~~P~~v~~lv~~l~~~~p~-~i~I~~H~Hnd~------GlAvAN~laAveAGa~~V 249 (539)
T 1rqb_A 189 ADSIALKDMA-----A------LLKPQPAYDIIKAIKDTYGQ-KTQINLHCHSTT------GVTEVSLMKAIEAGVDVV 249 (539)
T ss_dssp CSEEEEEETT-----C------CCCHHHHHHHHHHHHHHHCT-TCCEEEEEBCTT------SCHHHHHHHHHHTTCSEE
T ss_pred CCEEEeCCCC-----C------CcCHHHHHHHHHHHHHhcCC-CceEEEEeCCCC------ChHHHHHHHHHHhCCCEE
Confidence 9999999986 2 33456777777777665310 112222233332 124566777788999976
No 491
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=80.53 E-value=5.8 Score=39.43 Aligned_cols=142 Identities=18% Similarity=0.157 Sum_probs=66.5
Q ss_pred HHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCH------HHHHHHHHHHHhcc-C
Q 012815 78 AKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISY------GEMVDQGQLITQAV-S 150 (456)
Q Consensus 78 a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~------~Eml~~~r~I~ra~-~ 150 (456)
++++.+..+.....++-+=-.....|.+++. |++++|.. +-.+|++|..++-= ...-...++..+.. .
T Consensus 135 t~~~v~a~~g~~~~i~~TRKt~Pglr~l~ky---Av~~GGg~--nHR~gL~d~vlikdNHi~~~G~i~~Av~~~r~~~p~ 209 (298)
T 3gnn_A 135 TRQYVDRIADTRARILDTRKTLPGLRLAQKY---AVRVGGGA--NQRLALYAGILIKENHIAAAGGVGEALDAAFALNAE 209 (298)
T ss_dssp HHHHHHHTTTSSCCEECCSCCCTTCHHHHHH---HHHHTTCC--CC-------------------CHHHHHHHHHHHC--
T ss_pred HHHHHHHhCCCCeEEEEecCCCcchHHHHHh---hHHhcCcc--ceecCCCcEEEEeHHHHHHcCCHHHHHHHHHHhCCC
Confidence 4455555553333333333333445666654 56666532 23679999776621 11122233333333 4
Q ss_pred CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEe
Q 012815 151 IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVAR 230 (456)
Q Consensus 151 iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiAR 230 (456)
.||.+..|+= ++ +++..++|+++|.+ |.. +++++ +.+++.. .+...|.|-
T Consensus 210 ~~ieVEvdtl----de----~~eAl~aGaD~I~L-Dn~--------------~~~~l----~~av~~i---~~~v~ieaS 259 (298)
T 3gnn_A 210 VPVQIEVETL----DQ----LRTALAHGARSVLL-DNF--------------TLDMM----RDAVRVT---EGRAVLEVS 259 (298)
T ss_dssp CCCEEEESSH----HH----HHHHHHTTCEEEEE-ESC--------------CHHHH----HHHHHHH---TTSEEEEEE
T ss_pred CCEEEEeCCH----HH----HHHHHHcCCCEEEE-CCC--------------CHHHH----HHHHHHh---CCCCeEEEE
Confidence 7888886652 23 45566789999999 432 23333 2233222 233333332
Q ss_pred cchhhcccHHHHHHHHHHhHhcCCCEEEeccC
Q 012815 231 TDSRQALSLEESLRRSRAFADAGADVLFIDAL 262 (456)
Q Consensus 231 TDA~~~~~ldeAI~RakAy~eAGAD~Ifie~~ 262 (456)
+ ++ ..++.+.|+++|+|.|-+-++
T Consensus 260 ----G--GI--~~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 260 ----G--GV--NFDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp ----S--SC--STTTHHHHHHTTCSEEECGGG
T ss_pred ----c--CC--CHHHHHHHHHcCCCEEEECCe
Confidence 2 11 136788899999999988665
No 492
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=80.46 E-value=3.6 Score=40.60 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=87.1
Q ss_pred CCCCcccccccccCCCccccccccHHHHHHHHHhCCCceeecccCChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCC
Q 012815 53 TNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGF 132 (456)
Q Consensus 53 ~~pr~~~~~R~y~~~s~~~~~a~~~a~~Lr~ll~~~~~lv~pgayDalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~ 132 (456)
..||..|++-+--.| ..-..|+++|+. ...-+|.+=.+ |+.++ . +|.
T Consensus 35 ~KPR~~GlT~v~Dkg--------lg~~~~~DlLe~------------------ag~yID~lKfg-~GTs~-l--~~~--- 81 (276)
T 1u83_A 35 NKPRETGQSILIDNG--------YPLQFFKDAIAG------------------ASDYIDFVKFG-WGTSL-L--TKD--- 81 (276)
T ss_dssp CSSCSSSCEEEEESS--------CCHHHHHHHHHH------------------HGGGCCEEEEC-TTGGG-G--CTT---
T ss_pred CCCcccCceEEecCC--------CCHHHHHHHHHH------------------hhhhcceEEec-Ccchh-h--hHH---
Confidence 457888887553333 234567777751 11226777766 34442 2 444
Q ss_pred CCHHHHHHHHHHHHhccCCcEEEeCCCCCCCH--H------HHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCH
Q 012815 133 ISYGEMVDQGQLITQAVSIPVIGDGDNGYGNA--M------NVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSR 204 (456)
Q Consensus 133 lt~~Eml~~~r~I~ra~~iPVIaD~DtGYG~~--~------nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ 204 (456)
+.|.++ +++..++++.- |++ + .+.+-++...+.|...|-|-|+.. -+|.
T Consensus 82 --l~ekI~----l~~~~gV~v~~------GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti-----------~l~~ 138 (276)
T 1u83_A 82 --LEEKIS----TLKEHDITFFF------GGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTL-----------PMTN 138 (276)
T ss_dssp --HHHHHH----HHHHTTCEEEE------CHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSS-----------CCCH
T ss_pred --HHHHHH----HHHHcCCeEeC------CcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcc-----------cCCH
Confidence 556554 44556788764 331 1 234455666679999999999751 2566
Q ss_pred HHHHHHHHHHHHHhHhhCCCeEEE---Eecch--hhcccHHHHHHHHHHhHhcCCCEEEeccCC
Q 012815 205 EEAVMRIKAAVDARKESGSDIVIV---ARTDS--RQALSLEESLRRSRAFADAGADVLFIDALA 263 (456)
Q Consensus 205 ee~v~kI~AA~~Ar~~~G~dfvIi---ARTDA--~~~~~ldeAI~RakAy~eAGAD~Ifie~~~ 263 (456)
++.++-|+ +|.. .|.|+ ++-|. ......++.|+++++..+||||.|++|+-.
T Consensus 139 ~~~~~lI~---~a~~----~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRE 195 (276)
T 1u83_A 139 KEKAAYIA---DFSD----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARE 195 (276)
T ss_dssp HHHHHHHH---HHTT----TSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC---
T ss_pred HHHHHHHH---HHHh----hcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeec
Confidence 65555554 4432 25444 33333 233456889999999999999999999844
No 493
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=80.08 E-value=3.8 Score=40.39 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=44.9
Q ss_pred HHHHHhHhcCCCEEEecc--C-------------------------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCH
Q 012815 244 RRSRAFADAGADVLFIDA--L-------------------------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNP 296 (456)
Q Consensus 244 ~RakAy~eAGAD~Ifie~--~-------------------------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~ 296 (456)
+.++...++|||.|.+-+ - ++.+.+.++.+.++.+|++.+ ||-....+.
T Consensus 196 e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~----GGI~~~~d~ 271 (332)
T 1vcf_A 196 EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVAS----GGVYTGTDG 271 (332)
T ss_dssp HHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEE----SSCCSHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEE----CCCCCHHHH
Confidence 346788999999998832 1 223455677777744777654 342222233
Q ss_pred HHHHhcCCCEEeccchHHHHH
Q 012815 297 LELEELGFKLVAYPLSLIGVS 317 (456)
Q Consensus 297 ~eL~elGv~~Vs~p~~ll~aa 317 (456)
.+.-.+|.+.|..+..++...
T Consensus 272 ~kal~~GAd~V~igr~~l~~~ 292 (332)
T 1vcf_A 272 AKALALGADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHHHTCSEEEECGGGHHHH
T ss_pred HHHHHhCCChHhhhHHHHHHH
Confidence 444457999999998887654
No 494
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=80.04 E-value=12 Score=39.41 Aligned_cols=98 Identities=14% Similarity=0.228 Sum_probs=57.9
Q ss_pred HHHHHHHhccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCcc---ccCHHHHHHHHHHHHH
Q 012815 140 DQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK---VVSREEAVMRIKAAVD 216 (456)
Q Consensus 140 ~~~r~I~ra~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~---lvp~ee~v~kI~AA~~ 216 (456)
+.++.|++.+++||++= |.++ .+.++.++++||++|.+-. |. |.. -.+.-+++..++.++.
T Consensus 333 ~~i~~lr~~~~~PvivK---gv~~----~e~A~~a~~aGad~I~vs~--------hg-G~~~d~~~~~~~~l~~v~~~v~ 396 (511)
T 1kbi_A 333 KDIEELKKKTKLPIVIK---GVQR----TEDVIKAAEIGVSGVVLSN--------HG-GRQLDFSRAPIEVLAETMPILE 396 (511)
T ss_dssp HHHHHHHHHCSSCEEEE---EECS----HHHHHHHHHTTCSEEEECC--------TT-TTSSTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEE---eCCC----HHHHHHHHHcCCCEEEEcC--------CC-CccCCCCCchHHHHHHHHHHHH
Confidence 34677777789999985 3333 3446788899999999932 32 111 1233445555555543
Q ss_pred HhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc
Q 012815 217 ARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA 261 (456)
Q Consensus 217 Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~ 261 (456)
.+. .+.++-|++=..-... ..+..+..+|||+|++-.
T Consensus 397 ~~~-~~~~ipVia~GGI~~g-------~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 397 QRN-LKDKLEVFVDGGVRRG-------TDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTT-CBTTBEEEEESSCCSH-------HHHHHHHHHTCSEEEECH
T ss_pred hhc-cCCCcEEEEECCCCCH-------HHHHHHHHcCCCEEEECH
Confidence 321 1235677775554432 223333448999999854
No 495
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=79.87 E-value=7.1 Score=37.60 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHhccC---CcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHH
Q 012815 134 SYGEMVDQGQLITQAVS---IPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMR 210 (456)
Q Consensus 134 t~~Eml~~~r~I~ra~~---iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~k 210 (456)
.++.+.+.++.|+++++ ++||. |+||=+.+++.+.++...++||+-|+---+.. .+|-.+- .++-
T Consensus 125 ~~~~v~~eI~~v~~a~~~~~lKVIl--Et~~Lt~eei~~a~~ia~~aGADfVKTSTGf~------~ggAt~~----dv~l 192 (239)
T 3ngj_A 125 KYDDVEKDVKAVVDASGKALTKVII--ECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG------THGATPE----DVKL 192 (239)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEC--CGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS------SCCCCHH----HHHH
T ss_pred cHHHHHHHHHHHHHHhcCCceEEEE--ecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC------CCCCCHH----HHHH
Confidence 34556677777776664 55555 99987778899999999999999998753321 1232222 2333
Q ss_pred HHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEe
Q 012815 211 IKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFI 259 (456)
Q Consensus 211 I~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifi 259 (456)
++..+ |.++-|.|=---+ . .+.+.+|.+|||+-|=.
T Consensus 193 mr~~v------g~~v~VKasGGIr---t----~~da~~~i~aGA~riGt 228 (239)
T 3ngj_A 193 MKDTV------GDKALVKAAGGIR---T----FDDAMKMINNGASRIGA 228 (239)
T ss_dssp HHHHH------GGGSEEEEESSCC---S----HHHHHHHHHTTEEEEEE
T ss_pred HHHhh------CCCceEEEeCCCC---C----HHHHHHHHHhcccceec
Confidence 33222 2334444321111 1 25688899999997643
No 496
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=79.83 E-value=1.7 Score=43.05 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=60.0
Q ss_pred CceeecccCChHHHHHHHHhCCcEEEecchHHhh-----------------hhcccCCCCCCCHH----HHHHHHHHHHh
Q 012815 89 GVHQGPACFDALSAKLVEKSGFSFCFTSGFSISA-----------------ARLALPDTGFISYG----EMVDQGQLITQ 147 (456)
Q Consensus 89 ~~lv~pgayDalSArl~e~aGfdAI~vSG~avSa-----------------s~lG~PD~~~lt~~----Eml~~~r~I~r 147 (456)
+..++.++++.--|..+.++|++.|.+.+.+-+. .....++-++.++. --++.++++++
T Consensus 125 g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~ 204 (297)
T 4adt_A 125 KTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRK 204 (297)
T ss_dssp SSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHH
Confidence 3555669999999999999999999998531000 00012222222221 11345667777
Q ss_pred ccCCcEEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeC
Q 012815 148 AVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILE 185 (456)
Q Consensus 148 a~~iPVIaD~DtGYG~~~nv~rtVk~l~~AGaaGI~IE 185 (456)
.+++||++=++.|..++.++ +.+.++||+||.+=
T Consensus 205 ~~~iPVivvA~GGI~t~~dv----~~~~~~GAdgVlVG 238 (297)
T 4adt_A 205 LKRLPVVNFAAGGIATPADA----AMCMQLGMDGVFVG 238 (297)
T ss_dssp HTSCSSEEEEESCCCSHHHH----HHHHHTTCSCEEES
T ss_pred hcCCCeEEEecCCCCCHHHH----HHHHHcCCCEEEEh
Confidence 78899986677887776555 46677899999883
No 497
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=79.83 E-value=8.6 Score=38.00 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=69.9
Q ss_pred CCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcc-c
Q 012815 160 GYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAL-S 238 (456)
Q Consensus 160 GYG~~~nv~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~-~ 238 (456)
|+++++.+.+.++++.+ |...+||-= |.. +-++++++++++. +. -=|.|+.... +
T Consensus 131 ~~~~~e~~~~~a~~~~~-g~~~~K~Kv-------g~~---------~d~~~v~avR~~~---~~----~l~vDaN~~~t~ 186 (338)
T 3ijl_A 131 GIDTPDVVRAKTKECAG-LFNILKVKL-------GRD---------NDKEMIETIRSVT---DL----PIAVDANQGWKD 186 (338)
T ss_dssp CCCCHHHHHHHHHHHHT-TCSSEEEEC-------SSS---------CHHHHHHHHHTTC---CC----CEEEECTTCCCC
T ss_pred eCCCHHHHHHHHHHHHh-cccEEEEec-------CcH---------HHHHHHHHHHhhc---CC----cEEEECcCCCCC
Confidence 45677888888888766 899998832 211 1366888877663 32 3346888888 5
Q ss_pred HHHHHHHHHHhHhcCCCEEEeccC---CCHHHHHHHHHhCCCCceee
Q 012815 239 LEESLRRSRAFADAGADVLFIDAL---ASKEEMKAFCEISPLVPKMA 282 (456)
Q Consensus 239 ldeAI~RakAy~eAGAD~Ifie~~---~s~eei~~i~~~v~~vP~~~ 282 (456)
.++|++.++++.+. +..|+|-+ .+.+.++++++..+ +|+..
T Consensus 187 ~~~A~~~~~~l~~~--~i~~iEeP~~~~d~~~~~~l~~~~~-ipIa~ 230 (338)
T 3ijl_A 187 RQYALDMIHWLKEK--GIVMIEQPMPKEQLDDIAWVTQQSP-LPVFA 230 (338)
T ss_dssp HHHHHHHHHHHHHT--TEEEEECCSCTTCHHHHHHHHHTCS-SCEEE
T ss_pred HHHHHHHHHHHhhC--CCCEEECCCCCCcHHHHHHHHhcCC-CCEEE
Confidence 99999999999997 57799874 35788999998876 77664
No 498
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=79.76 E-value=44 Score=31.96 Aligned_cols=119 Identities=18% Similarity=0.174 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHhcc-CCcEEEeCCC----C-C--CCHHHHHHHHHHHHHhC-ccEEEeCCCCCCCCccCCCCccccCH
Q 012815 134 SYGEMVDQGQLITQAV-SIPVIGDGDN----G-Y--GNAMNVKRTVKGYIKAG-FAGIILEDQVSPKGCGHTRGRKVVSR 204 (456)
Q Consensus 134 t~~Eml~~~r~I~ra~-~iPVIaD~Dt----G-Y--G~~~nv~rtVk~l~~AG-aaGI~IEDq~~pK~CGH~~gk~lvp~ 204 (456)
+.+++...++.+.+.. ++|+|+-.-+ | | ++...-.+..+...+.| ++-|=||-...
T Consensus 61 ~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~--------------- 125 (257)
T 2yr1_A 61 DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYG--------------- 125 (257)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT---------------
T ss_pred cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCC---------------
Confidence 3566777777777777 7999997743 5 3 23455566778888888 99999987530
Q ss_pred HHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHHHhHhcCCCEEEecc-CCCHHHHHHHH
Q 012815 205 EEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDA-LASKEEMKAFC 272 (456)
Q Consensus 205 ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~RakAy~eAGAD~Ifie~-~~s~eei~~i~ 272 (456)
+ .+.++ .+..+. +.--+|.-.-|-......++.+++.+...+.|||++=+-. ..+.++..++.
T Consensus 126 ~-~~~~l---~~~~~~-~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll 189 (257)
T 2yr1_A 126 E-RIADV---RRMTEE-CSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLL 189 (257)
T ss_dssp T-HHHHH---HHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHH
T ss_pred h-hHHHH---HHHHHh-CCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHH
Confidence 1 12222 222222 1123455555543334568888999999999999986544 34555555444
No 499
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=79.65 E-value=10 Score=37.35 Aligned_cols=138 Identities=11% Similarity=0.029 Sum_probs=82.9
Q ss_pred ChHHHHHHHHhCCcEEEecchHHhhhhcccCCCCCCCHHHHHHHHHHHHhc---cCCcEEE------eCCC-CCCCHHHH
Q 012815 98 DALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQA---VSIPVIG------DGDN-GYGNAMNV 167 (456)
Q Consensus 98 DalSArl~e~aGfdAI~vSG~avSas~lG~PD~~~lt~~Eml~~~r~I~ra---~~iPVIa------D~Dt-GYG~~~nv 167 (456)
+.--.+.+-++|++.+-+.... +- .+-.-- -..|.+|.++.++.+.+. .+..|.+ +.|+ |--++..+
T Consensus 83 ~~~~i~~a~~~g~~~v~i~~~~-sd-~~~~~~-l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~ 159 (307)
T 1ydo_A 83 NQRGLENALEGGINEACVFMSA-SE-THNRKN-INKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQV 159 (307)
T ss_dssp SHHHHHHHHHHTCSEEEEEEES-SH-HHHHTT-TCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHH
T ss_pred CHHhHHHHHhCCcCEEEEEeec-CH-HHHHHH-hCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHH
Confidence 3344556667899987765211 10 111111 235888888877766543 3566743 3333 22256789
Q ss_pred HHHHHHHHHhCccEEEeCCCCCCCCccCCCCccccCHHHHHHHHHHHHHHhHhhCCCeEEEEecchhhcccHHHHHHHHH
Q 012815 168 KRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSR 247 (456)
Q Consensus 168 ~rtVk~l~~AGaaGI~IEDq~~pK~CGH~~gk~lvp~ee~v~kI~AA~~Ar~~~G~dfvIiARTDA~~~~~ldeAI~Rak 247 (456)
.+.++.+.++|+.-|.|-|.. | +..++++.+.|++.++.- ++..|-.-+=. .+--|+.-+.
T Consensus 160 ~~~~~~~~~~Ga~~i~l~DT~-----G------~~~P~~v~~lv~~l~~~~----~~~~l~~H~Hn----d~Gla~AN~l 220 (307)
T 1ydo_A 160 IRLSEALFEFGISELSLGDTI-----G------AANPAQVETVLEALLARF----PANQIALHFHD----TRGTALANMV 220 (307)
T ss_dssp HHHHHHHHHHTCSCEEEECSS-----C------CCCHHHHHHHHHHHHTTS----CGGGEEEECBG----GGSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCC-----C------CcCHHHHHHHHHHHHHhC----CCCeEEEEECC----CCchHHHHHH
Confidence 999999999999999999986 2 234566777777766442 12222222211 1123466677
Q ss_pred HhHhcCCCEE
Q 012815 248 AFADAGADVL 257 (456)
Q Consensus 248 Ay~eAGAD~I 257 (456)
+..+|||+.|
T Consensus 221 aAv~aGa~~v 230 (307)
T 1ydo_A 221 TALQMGITVF 230 (307)
T ss_dssp HHHHHTCCEE
T ss_pred HHHHhCCCEE
Confidence 7789999876
No 500
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=79.56 E-value=1.9 Score=39.46 Aligned_cols=70 Identities=16% Similarity=0.243 Sum_probs=47.9
Q ss_pred HHHHHHHHHhHhcCCCEEEeccC--------CCHHHHHHHHHhCCCCceeeeeeccCCCCCCCCHHHHHhcCCCEEeccc
Q 012815 240 EESLRRSRAFADAGADVLFIDAL--------ASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPL 311 (456)
Q Consensus 240 deAI~RakAy~eAGAD~Ifie~~--------~s~eei~~i~~~v~~vP~~~N~~~~~g~tp~lt~~eL~elGv~~Vs~p~ 311 (456)
++.++.++++.++|||.|.+... ...+.++++++.+. +|+.++- +-...-..+++.+.|+..|.++.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~g----~i~~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS-IPVLVGG----GVRSLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS-SCEEEES----SCCSHHHHHHHHHHTCSEEEESH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC-CCEEEEC----CCCCHHHHHHHHHcCCCEEEECh
Confidence 35678899999999998876532 12456778887775 7876542 21111235778889999999986
Q ss_pred hHH
Q 012815 312 SLI 314 (456)
Q Consensus 312 ~ll 314 (456)
.++
T Consensus 108 ~~~ 110 (253)
T 1h5y_A 108 AAV 110 (253)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
Done!