Your job contains 1 sequence.
>012816
MKNEERKVNPNCIKASNPYHECGERCFKRNGEANALGFKKQSDNHNGVTEGVISVKKNEG
RKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQPGTPLTPR
AVDKVAVGGQKANGQHARSENYPKKKVESENGKSFSRPEHFSREIHPEDHSLNKEKVRST
QSVPPSENIKMNDMSKSPPKESVTSLPGASPSKNGKDNKVQAPIEIHHSTEDGGEDIPSP
ADGSRNFSFSGIDLASGDSDDEEAQSVISDSVSVGKYHVRASISSILQSIISRYGDIAAN
CNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNIL
NEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEVAGLKESVAKTKA
RLSDLELESNRLEQIIQATQSKVTKFSQKSLADEIL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012816
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131611 - symbol:AT4G35110 "AT4G35110" species... 547 8.0e-53 1
TAIR|locus:2039435 - symbol:AT2G16900 "AT2G16900" species... 497 1.6e-47 1
TAIR|locus:2121159 - symbol:AT4G38550 species:3702 "Arabi... 360 7.0e-37 3
TAIR|locus:2047122 - symbol:pEARLI4 "AT2G20960" species:3... 341 5.1e-36 2
TAIR|locus:2046992 - symbol:AT2G20950 species:3702 "Arabi... 352 1.1e-35 2
TAIR|locus:2121169 - symbol:AT4G38560 "AT4G38560" species... 318 1.9e-35 3
TAIR|locus:2147937 - symbol:AT5G11140 "AT5G11140" species... 318 1.5e-28 1
TAIR|locus:2085385 - symbol:AT3G58270 "AT3G58270" species... 135 4.6e-06 1
TAIR|locus:2085460 - symbol:AT3G58220 "AT3G58220" species... 131 2.1e-05 1
TAIR|locus:2085325 - symbol:AT3G58400 "AT3G58400" species... 127 3.0e-05 1
TAIR|locus:2039395 - symbol:AT2G16860 "AT2G16860" species... 127 3.4e-05 2
TAIR|locus:2085390 - symbol:AT3G58360 "AT3G58360" species... 120 0.00016 1
RGD|1306536 - symbol:Rrbp1 "ribosome binding protein 1" s... 90 0.00022 2
TAIR|locus:2085350 - symbol:AT3G58330 "AT3G58330" species... 111 0.00025 1
GENEDB_PFALCIPARUM|PF14_0404 - symbol:PF14_0404 "hypothet... 107 0.00027 2
UNIPROTKB|Q8IL45 - symbol:TREP "TRAP-related protein" spe... 107 0.00027 2
TAIR|locus:2085375 - symbol:RTM3 "AT3G58350" species:3702... 118 0.00028 1
>TAIR|locus:2131611 [details] [associations]
symbol:AT4G35110 "AT4G35110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0080167 "response to karrikin"
evidence=IEP] [GO:0043090 "amino acid import" evidence=RCA]
EMBL:CP002687 GO:GO:0080167 EMBL:AL161586 IPI:IPI00846856
RefSeq:NP_001078494.1 UniGene:At.2102 STRING:A8MQE1 PRIDE:A8MQE1
EnsemblPlants:AT4G35110.3 GeneID:829663 KEGG:ath:AT4G35110
TAIR:At4g35110 eggNOG:NOG328928 HOGENOM:HOG000015108 OMA:FHECASA
PhylomeDB:A8MQE1 ProtClustDB:CLSN2685931 Genevestigator:A8MQE1
InterPro:IPR007942 Pfam:PF05278 Uniprot:A8MQE1
Length = 401
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 144/408 (35%), Positives = 217/408 (53%)
Query: 61 RKVDPTCIKASNPYHECGEHCFKRNGEANAR-GVNKESG-----SWSFGRKNKASDSQPG 114
RK P C+ A NP+HEC C ++ + + + K+S S SFGRK K S+SQP
Sbjct: 20 RKAHPDCVYADNPFHECASACLEKIAQGHVKKNTKKQSSRLLSFSGSFGRKKKESNSQPP 79
Query: 115 TPLTPRAVDKVAVGGQKANGQHARSENYP----KKKVESENGKSFSRPEHFSREIHPEDH 170
TPL+ R G N P KKK+ SE SF+ S P+D
Sbjct: 80 TPLSARPYQNGRGGFANGNSPKVHHSVAPPASVKKKIVSETKNSFTS----SSSGDPDDF 135
Query: 171 SLNKEKVRSTQSVPPSENIKMNDMSKS-PPKESVTSLPGASPSKNGKDNKVQAPIEIHHS 229
+K + + +Q++P S N + D SK PK + G G + ++ + + + S
Sbjct: 136 FNHKPEKKPSQTIPLSSN-NLVDQSKVVSPKPGIQEHNGKIGE--GGETRLFSFLSLPRS 192
Query: 230 TEDGGEDIPSPADGSRNFSFSGIDLASGDSDDEEAQSVISDS-VSVGKYHVRAXXXXXXX 288
D S D N G++L + +SV+SD+ VSVGKY VR+
Sbjct: 193 PGKESNDDFSDDDDENNNEI-GVEL--------DLESVMSDTFVSVGKYRVRSGSSTILS 243
Query: 289 XXXXRYGDIAANCNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVES 348
++GDIA NC LES+SMR+ YLECLCS++QEL+ST + Q++K KVKEM+AVLKD+ES
Sbjct: 244 AVIEKHGDIAQNCKLESDSMRSRYLECLCSLMQELRSTPVGQLSKVKVKEMLAVLKDLES 303
Query: 349 AQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEV 408
I+V WLR++L E F+ + ++ K L+++ ++ELE+Q +L EKEV
Sbjct: 304 VNIEVAWLRSVLEE------FAQSQEDVENEKERHDGLVKAKREELEAQETDLVRMEKEV 357
Query: 409 AGLKESVAKTKARLSDLELESNRLEQIIQATQSKVTKFSQKSLADEIL 456
+K + +T+A++ ++E E R+E++ K+ KF KS DE+L
Sbjct: 358 VEVKRRIEETRAQMVEIEAERLRMEKM----GFKMEKFKGKSFIDELL 401
>TAIR|locus:2039435 [details] [associations]
symbol:AT2G16900 "AT2G16900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006979 "response to oxidative stress"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0052542 "defense
response by callose deposition" evidence=RCA] GO:GO:0005886
EMBL:CP002685 EMBL:AC005167 ProtClustDB:CLSN2685931
InterPro:IPR007942 Pfam:PF05278 IPI:IPI00517554 PIR:F84545
RefSeq:NP_565397.1 UniGene:At.12863 IntAct:Q9ZVX3 STRING:Q9ZVX3
PRIDE:Q9ZVX3 EnsemblPlants:AT2G16900.1 GeneID:816192
KEGG:ath:AT2G16900 TAIR:At2g16900 OMA:CKLESAS PhylomeDB:Q9ZVX3
ArrayExpress:Q9ZVX3 Genevestigator:Q9ZVX3 Uniprot:Q9ZVX3
Length = 382
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 147/408 (36%), Positives = 210/408 (51%)
Query: 61 RKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESGS------WSFGRKNKASDSQPG 114
RK P C +SNP+HEC C ++ + +K+ GS SFG+K ++SQP
Sbjct: 5 RKAHPDCRYSSNPFHECASDCLEKISQGRGNKNSKKQGSKILSLPGSFGKKK--TESQPP 62
Query: 115 TPLTPRAVDKVAVGGQKANGQHARSENYPKKKVESENGKSFSR--PEHFSREIHPEDHSL 172
+PL+ R A K Q S KK E KS + S +++ ++ S
Sbjct: 63 SPLSTRNYQNGAANTPKVR-QSRPSPVAMKKTPVPEANKSLHSLSSDGISIDLNGQNDSF 121
Query: 173 NKEKVRSTQSVPPSENIKMNDMSK--SP-PKESVTSLPGASPSKNGKDNKVQAPIEIHHS 229
N ++ + +++VP S N M D K SP P+ S + S+ N V P
Sbjct: 122 NHKQEKPSRTVPLSPN-SMADRGKPLSPRPQGHEHSGKNDTASEISLFNVVSPP---RSC 177
Query: 230 TEDGGEDIPSPADGSRNFSFSGIDLASGDSDDEEAQSVISDS-VSVGKYHVRAXXXXXXX 288
D +D D N G++L + SV+SDS VSVGKY V +
Sbjct: 178 ANDDDDD-----DDENNGYEEGVEL--------DLISVMSDSCVSVGKYRVNSSVSTILQ 224
Query: 289 XXXXRYGDIAANCNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVES 348
++GDIAANC LES SMR+ YLECLCS++QEL ST + Q+T+ KVKEM+AVLKD+ES
Sbjct: 225 SIIDKHGDIAANCKLESASMRSRYLECLCSLMQELGSTPVGQLTELKVKEMVAVLKDLES 284
Query: 349 AQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEV 408
IDV W+R++L E F+ + D+ K L+ S K+E+E Q +LA EKEV
Sbjct: 285 VNIDVGWMRSVLEE------FAQYQENTDSEKERQEGLVRSKKQEMEIQEADLARIEKEV 338
Query: 409 AGLKESVAKTKARLSDLELESNRLEQIIQATQSKVTKFSQKSLADEIL 456
A + V + KA L++LE E R+E++ KV K+ K+ DE+L
Sbjct: 339 AEARLRVEEMKAELAELETERLRMEEM----GFKVEKYKGKTFLDELL 382
>TAIR|locus:2121159 [details] [associations]
symbol:AT4G38550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006612 "protein targeting
to membrane" evidence=RCA] [GO:0009627 "systemic acquired
resistance" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031347 "regulation of defense response" evidence=RCA]
EMBL:CP002687 InterPro:IPR007942 Pfam:PF05278 EMBL:AF360282
EMBL:BT000695 EMBL:BT001966 IPI:IPI00547260 RefSeq:NP_195567.2
UniGene:At.19022 UniGene:At.74802 IntAct:Q9C5F6 STRING:Q9C5F6
PRIDE:Q9C5F6 EnsemblPlants:AT4G38550.1 GeneID:830012
KEGG:ath:AT4G38550 TAIR:At4g38550 OMA:RSNHGKE PhylomeDB:Q9C5F6
ProtClustDB:CLSN2690367 Genevestigator:Q9C5F6 Uniprot:Q9C5F6
Length = 612
Score = 360 (131.8 bits), Expect = 7.0e-37, Sum P(3) = 7.0e-37
Identities = 81/219 (36%), Positives = 126/219 (57%)
Query: 238 PSPADGSRNFSFSGIDLASG----DSDDEEAQSVISDS-VSVGKYHVRAXXXXXXXXXXX 292
P D S++F+ I G +S EE+QS+IS++ VSV Y VR
Sbjct: 390 PELPDESQSFTMQEITKMRGLKNYESGKEESQSMISEAYVSVANYRVRQSVSETLQAIID 449
Query: 293 RYGDIAANCNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQID 352
++GDIAA+ L++ + R+YYLE L +VV EL+ T L +TK +V E+ AV+KD+ES +I+
Sbjct: 450 KHGDIAASSKLQAMATRSYYLESLAAVVMELKKTVLRDLTKTRVAEIAAVVKDMESVKIN 509
Query: 353 VDWLRNILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEVAGLK 412
V WL+ + E++EA+E+ Q+ T K C L + K E+E EL +EKE+ +
Sbjct: 510 VSWLKTAVTELAEAVEYFGQYDTAKVEKEVCERDLTAKKGEMEEMTAELVKREKEIKECR 569
Query: 413 ESVAKTKARLSDLELESNRLEQIIQATQSKVTKFSQKSL 451
E V RL LE++ ++L + + QSKV KF +++
Sbjct: 570 EKVTVVAGRLGQLEMKGSKLNKNLDLFQSKVHKFQGEAV 608
Score = 49 (22.3 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 88 ANARGVNKESGSWSFGRKNKASDSQPGTPLTP---RAVDKVAVGGQKANGQH---ARSEN 141
+ A+ +K+S S FG+K S S PG+P P R+ + ++A ++ +E
Sbjct: 7 SKAKKDSKKS-SGLFGKKT-VSKSTPGSPAHPPGARSPPPSYLSNKRAETEYDFPMSNEQ 64
Query: 142 YPK-KKVESEN-GKSFSRPE--HFSREIHPEDHSLNKEKVRSTQSVPPSEN 188
P K+ SE S RP + H DH +E++ + S P N
Sbjct: 65 RPYWKQPASERVPNSHPRPPVYGYGTPDHRRDHG--RERMEA-MSYEPETN 112
Score = 48 (22.0 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 54/246 (21%), Positives = 78/246 (31%)
Query: 4 EERKVNPNCIKASNPYHECGERCFKRNGEANALGFKKQSDNHNGVTEGVISVKKNEGRKV 63
E P S+PYH G R +R ++ + Q + T ++
Sbjct: 103 EAMSYEPETNAPSSPYHPAGNRTPERPRKSTEYRREHQDRMYEADT-------RSNASPF 155
Query: 64 DPTCIKASNPYHECG---EHCFKRNGEANARGVNKESGSWSFGRKNKASDSQPGTPLTPR 120
P + +P+H +H EAN N GS F S TP
Sbjct: 156 HPFRSPSPSPFHTPDRRRDHYDMYEPEANTMLQNSAPGS-PFHPAGSRSPPPYRTPDRRS 214
Query: 121 AVDKVAVGG-QKANGQHARSENYPKKKVESENGK-SFSRPEHFSREIHPEDHSLNKEKVR 178
DK + +G + P K S R H +I ED + V
Sbjct: 215 NYDKEQFEDLYEQDGDVTPRNSSPPSPFHPAAYKTSDQRSNHGKEQI--EDFYEQDDDVT 272
Query: 179 STQSVPPSENIKMNDMSKSPPKESVTSLPGASPSKNGKDNK-VQAPIEIHHSTEDGGEDI 237
S PPS S PP+ T P ++ +DN+ +A E+
Sbjct: 273 PRNSSPPSPLHPAASHSPPPPQPYRT--P--DHRRSHQDNEDFEAMYELDGDLIHQKSAP 328
Query: 238 PSPADG 243
PSP G
Sbjct: 329 PSPVHG 334
Score = 40 (19.1 bits), Expect = 7.0e-37, Sum P(3) = 7.0e-37
Identities = 11/58 (18%), Positives = 22/58 (37%)
Query: 56 KKNEGRKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQP 113
++ E +P S+PYH G +R ++ + + ++ AS P
Sbjct: 100 ERMEAMSYEPETNAPSSPYHPAGNRTPERPRKSTEYRREHQDRMYEADTRSNASPFHP 157
Score = 39 (18.8 bits), Expect = 7.0e-37, Sum P(3) = 7.0e-37
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 154 SFSRPEHFSREIHPEDHSLNKEKVRSTQSVPPSENIKM 191
S S ++ S ++PE S + ++ S S P N ++
Sbjct: 338 SSSDDDNHSTYLYPEIRSPLRSRIVSENSTPVHHNYQI 375
>TAIR|locus:2047122 [details] [associations]
symbol:pEARLI4 "AT2G20960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006569 "tryptophan catabolic process"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] EMBL:CP002685 EMBL:AC006234 EMBL:AC006264
InterPro:IPR007942 Pfam:PF05278 EMBL:AY059813 EMBL:BT000010
IPI:IPI00543282 PIR:D84595 RefSeq:NP_179692.1 UniGene:At.25090
STRING:Q9SKR5 PRIDE:Q9SKR5 EnsemblPlants:AT2G20960.1 GeneID:816630
KEGG:ath:AT2G20960 TAIR:At2g20960 InParanoid:Q9SKR5 OMA:PRTPIHE
PhylomeDB:Q9SKR5 ProtClustDB:CLSN2913136 Genevestigator:Q9SKR5
Uniprot:Q9SKR5
Length = 748
Score = 341 (125.1 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 88/261 (33%), Positives = 139/261 (53%)
Query: 201 ESVTSLPGASPSKNGKDNKVQAPIEIHHSTEDGGEDIPSPADGSRNFSFSGIDLASGDSD 260
E S+ + SK+G + E H + ++P D S++FS + I G
Sbjct: 496 EHTVSIYAETTSKSGSSEQ-----EEQHKANNEPPELP---DESQSFSLAEISRMKGIIT 547
Query: 261 DEEA----QSVISDS-VSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLEC 315
+ E QS++S+S VSVG+Y VRA ++GDIA+ L+S + R+YYL+
Sbjct: 548 NNEIRDVMQSILSESYVSVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDM 607
Query: 316 LCSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQT 375
L SVV ELQ+T L + +++V EM+A++KD+ES +I WL+ +L EI EA++ +H+
Sbjct: 608 LASVVFELQTTPLKYLKESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKM 667
Query: 376 IDAAKANCVNLLESTKKELESQMNELALKEKEVAGLKESVAKTKARLSDLELESNRLEQI 435
K + K+E E Q+ EL KEK++ + + + A+L DL+++ RL +
Sbjct: 668 SVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAAKLGDLDMKRARLHKS 727
Query: 436 IQATQSKVTKFSQKSLADEIL 456
SKV KF K L IL
Sbjct: 728 FTFLSSKVDKFQGKPLLQGIL 748
Score = 81 (33.6 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 45/206 (21%), Positives = 76/206 (36%)
Query: 7 KVNPNCIKASNPYHECGERCFKRNGEANALGFKKQSDNHNGVTEGVISVKKNEGRKVDPT 66
KV P C A NP+HEC CF+R N+ K+ G G K+ R P
Sbjct: 7 KVVPGCSNAGNPFHECTAICFER---VNSPDVHKKEKKLFGF--G----KRTPSRDQTPP 57
Query: 67 CIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQP--GTPLTPRA-VD 123
A + K+ E++A S+ N S P G + P + VD
Sbjct: 58 ASPARGSRSPLASYFAKKKVESSAES---SPSSYDHTNGNFLSRLSPLQGRKIEPSSNVD 114
Query: 124 KVAVGGQKANGQHARSENYPKKKVESENGKSFSRPEHFSREIHPEDHSLN--KEKVRSTQ 181
+ V A ++ + + ++ + + P F + +H L + + R+ Q
Sbjct: 115 SLPVSPSLA--LYSGGDYFARRADQRGDEDDDVSPRPFGTQPKTPEHPLRTPQHRPRTPQ 172
Query: 182 --SVPPSENIKMNDMSKSPPKESVTS 205
S + + ++P + S TS
Sbjct: 173 HRSAHQEDAFSLETRPRTPERRSNTS 198
Score = 58 (25.5 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 30/118 (25%), Positives = 47/118 (39%)
Query: 107 KASDSQPGTPLT-PRAVD---KVAV-GGQKANGQHARSENYPKKKVESENGKSFSRPEHF 161
+ + QP T T PR + K AV GG+ + + S+ ++ + N S+ E
Sbjct: 371 RTPEHQPRTVETKPRIHESRPKTAVYGGRSPDHREKISQEMGQRSSHAYNYLG-SKAESV 429
Query: 162 SREIHPEDHSLNKEKVRSTQSVPPSENIKMNDMSKSPPKESVTSLPGASPSKNGKDNK 219
E + E L E + S Q PPS I +N P + S + D+K
Sbjct: 430 YIEKNEESVLLFPELILSPQERPPSRLITLNHRGYETPNKQKEHCDEMDDSASTDDDK 487
Score = 45 (20.9 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 104 RKNKASDSQPGTPL-----TPRAVDKVAVGGQKANGQHARSENYPKKKVESENGKSFSRP 158
R++ SD++P TP+ T R + + ++A +N P+ + E+ + RP
Sbjct: 193 RRSNTSDTRPRTPIHESAATGRRPQTPETRPRTPDHRYATYDNRPRTPIH-ESAATERRP 251
Query: 159 EH-FSREIHPEDHS 171
+ +R PE S
Sbjct: 252 QTPETRPRTPEHRS 265
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 113 PGT-PLTPRAVDKVAVGGQKANGQHARSENYPKKKVESENGKSFSRPE 159
P T P++ R++D A+ + R+ + + VE++ SRP+
Sbjct: 345 PQTQPMSHRSLDNAALKMPRTVETRPRTPEHQPRTVETKPRIHESRPK 392
>TAIR|locus:2046992 [details] [associations]
symbol:AT2G20950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] EMBL:CP002685 InterPro:IPR007942 Pfam:PF05278
IPI:IPI00548913 RefSeq:NP_973501.1 UniGene:At.39631 PRIDE:F4IFM0
EnsemblPlants:AT2G20950.4 GeneID:816629 KEGG:ath:AT2G20950
OMA:SERIPNS PhylomeDB:F4IFM0 Uniprot:F4IFM0
Length = 530
Score = 352 (129.0 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 78/217 (35%), Positives = 123/217 (56%)
Query: 238 PSPADGSRNFSFSGIDLASG--DSDDEEAQSVISDS-VSVGKYHVRAXXXXXXXXXXXRY 294
P D S++F+ I G EE Q IS++ VSV Y VR ++
Sbjct: 311 PELPDESQSFTMQEIARMRGLQSYGKEEIQLAISETYVSVANYKVRMSIAATLEAIIDKH 370
Query: 295 GDIAANCNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVD 354
GDIAA+ L+S S R++YLE L + V EL+ST+L +TK +V E+ AV+KD++S +IDV
Sbjct: 371 GDIAASSKLQSTSTRSFYLESLAAAVMELKSTALRDLTKTRVAEIAAVVKDMDSVKIDVS 430
Query: 355 WLRNILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEVAGLKES 414
WL+ + E++EA+E+ ++ T + C + + KKE+E EL +EKE +E
Sbjct: 431 WLKTAVTELAEAVEYYGKYDTAKIVREECDREMTAGKKEMEEMREELRRREKETKECRER 490
Query: 415 VAKTKARLSDLELESNRLEQIIQATQSKVTKFSQKSL 451
V + RL LE++ R+++ ++ +SKV KF S+
Sbjct: 491 VTELAGRLGQLEMKDVRVKKNLELYESKVLKFDGHSV 527
Score = 53 (23.7 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 131 KANGQHARSENYPKKKVESE-NGKSFSRPE---HFSREIHPEDHS 171
+A+ H R +Y +++ E+E N S +RP H S+ P H+
Sbjct: 139 EADANHERGRDYSRERYEAEGNVTSRNRPSSPFHPSQSRSPPPHA 183
>TAIR|locus:2121169 [details] [associations]
symbol:AT4G38560 "AT4G38560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
UniGene:At.48962 UniGene:At.71025 InterPro:IPR007942 Pfam:PF05278
EMBL:AK226980 IPI:IPI00542074 RefSeq:NP_001078512.1
EnsemblPlants:AT4G38560.2 GeneID:830013 KEGG:ath:AT4G38560
TAIR:At4g38560 eggNOG:NOG328515 HOGENOM:HOG000120704 OMA:HETTVVE
PhylomeDB:Q0WV01 ProtClustDB:CLSN2685438 Genevestigator:Q0WV01
Uniprot:Q0WV01
Length = 523
Score = 318 (117.0 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 75/195 (38%), Positives = 112/195 (57%)
Query: 262 EEAQSVISDS-VSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECLCSVV 320
EE +S+IS+S VSVG Y VRA ++GDIA+ L+S ++Y LE L +VV
Sbjct: 328 EEMKSMISESYVSVGSYKVRASVSSTLQKILDKHGDIASGSKLQSLRTKSYSLETLAAVV 387
Query: 321 QELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTIDAAK 380
ELQST L ++ +A+V EM++V+ D ES +I WLR ILNEI EA H+T K
Sbjct: 388 LELQSTPLKKLKQARVLEMLSVVIDAESVKIRAGWLREILNEILEAAHHYDGHETTVVEK 447
Query: 381 ANCVNLLESTKKELESQMNELALKEKEVAGLKESVAKTKARLSDLELESNRLEQIIQATQ 440
+ ++E++ E+ LKEKE ++ V + RL +L+++ RLE+ +
Sbjct: 448 EGRERDMLLEREEMKKIQEEVRLKEKEAKDFRKGVMEMAGRLGELKMKRARLEKRLAFLS 507
Query: 441 SKVTKFSQKSLADEI 455
SKV KF +SL + +
Sbjct: 508 SKVEKFEGESLLENV 522
Score = 93 (37.8 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 28/90 (31%), Positives = 40/90 (44%)
Query: 67 CIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQPGTPLTPRAVDKVA 126
C + NPYHEC + CFKR + KE + FG+ + + TPLT +V
Sbjct: 9 CPNSGNPYHECHDQCFKRISSGDVP--KKEKKRFGFGKPACSKE----TPLTSPV--RVI 60
Query: 127 VGGQKANGQHARSENYPKKKVESENGKSFS 156
G + + Y K+ ES+ SFS
Sbjct: 61 AGNRSPLPSY-----YGKRMDESDESPSFS 85
Score = 79 (32.9 bits), Expect = 5.3e-34, Sum P(3) = 5.3e-34
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 8 VNPNCIKASNPYHECGERCFKR 29
V+ +C + NPYHEC ++CFKR
Sbjct: 5 VHHDCPNSGNPYHECHDQCFKR 26
Score = 42 (19.8 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 210 SPSKNGKDNKVQAPIEIHHSTEDGGEDIPSP--ADGSRNFS-FSGIDLASGDSDDEEAQS 266
SPS + D+ A + ST G E P S +F+ + D S D E ++
Sbjct: 81 SPSFSSSDDSFNANLPTPRSTLHGNETAPGINWLPMSPSFAVYCKKDCFSSRIDHREGEA 140
Query: 267 VISDSV 272
I D +
Sbjct: 141 PILDEM 146
>TAIR|locus:2147937 [details] [associations]
symbol:AT5G11140 "AT5G11140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL360314
InterPro:IPR007942 Pfam:PF05278 EMBL:AY924835 IPI:IPI00537499
RefSeq:NP_196675.1 UniGene:At.54813 PRIDE:Q9LFP2
EnsemblPlants:AT5G11140.1 GeneID:830982 KEGG:ath:AT5G11140
TAIR:At5g11140 eggNOG:NOG330500 HOGENOM:HOG000153013 OMA:VLEATRY
PhylomeDB:Q9LFP2 ProtClustDB:CLSN2916349 Genevestigator:Q9LFP2
Uniprot:Q9LFP2
Length = 241
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 72/188 (38%), Positives = 113/188 (60%)
Query: 270 DSVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECLCSVVQELQSTSLM 329
D VSVG+Y V+A +YGDI +N L+S S R Y+LE L VV ELQST L
Sbjct: 55 DVVSVGEYKVKASLSSTLQSIFDKYGDITSNSKLQSLSTRTYHLETLAEVVIELQSTPLR 114
Query: 330 QMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIE-FSTQHQTIDAAKANCVNLLE 388
++++++ E++A++ D+E+A+I V WLR++L E+ EA F + KA LL
Sbjct: 115 RLSESRATEILAIVDDIETAKIRVGWLRSVLEEVLEATRYFDRCEMAVMEKKAGEHRLLL 174
Query: 389 STKKELESQMNELALKEKEVAGLKESVAKTKARLSDLELESNRLEQIIQATQSKVTKFSQ 448
+ K+E+E + +LA KEKE+ +E + KT +L LE++ L++ + +SKV KF
Sbjct: 175 A-KQEMELSLKKLAEKEKEMKEFREKLMKTTGKLGSLEMKRTCLDKRLVFLRSKVEKFQG 233
Query: 449 KSLADEIL 456
+S+ +IL
Sbjct: 234 QSVFQDIL 241
>TAIR|locus:2085385 [details] [associations]
symbol:AT3G58270 "AT3G58270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002083 InterPro:IPR008974 PROSITE:PS50144
SMART:SM00061 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF49599 EMBL:AL137081 InterPro:IPR007942 Pfam:PF05278
HOGENOM:HOG000064658 EMBL:BT022007 IPI:IPI00541998 PIR:T45987
RefSeq:NP_001030883.1 RefSeq:NP_191386.1 UniGene:At.34744
ProteinModelPortal:Q9M2I9 SMR:Q9M2I9 PRIDE:Q9M2I9
EnsemblPlants:AT3G58270.1 EnsemblPlants:AT3G58270.2 GeneID:824996
KEGG:ath:AT3G58270 TAIR:At3g58270 eggNOG:NOG276271
InParanoid:Q9M2I9 OMA:TRVHEIE PhylomeDB:Q9M2I9
ProtClustDB:CLSN2684715 Genevestigator:Q9M2I9 Uniprot:Q9M2I9
Length = 343
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 219 KVQAPIEIHHST-----EDGGEDIPSPADGSRNFSFSGIDLASG-DSDD--EEAQSVISD 270
K+ P+E +T E D+P ++ + + S +D G +S+D +EA SV +
Sbjct: 139 KLDVPVESEETTTKALSELEENDVPEESEETTK-ALSKVDENDGAESNDSLKEASSV-KE 196
Query: 271 SVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECLCSVVQEL-QSTSLM 329
S+ V + V R+ DIA+ ++ +R+ Y+ L S+++ + QST
Sbjct: 197 SMDVNGFRVLPSQVETVSCIFERHPDIASEFGPKNQHLRSAYMNVLLSLIKTMCQSTQ-- 254
Query: 330 QMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCVNLLES 389
+++K + + A L + A ++++WL L E+SE + + +A + V+ +E
Sbjct: 255 ELSKDDLSDADAALAYLTDAGLNLNWLEEKLEEVSE------KKENEEAGETR-VHEIEE 307
Query: 390 TKKELESQMNEL-ALKEKEVAGLKESVAKTKARLSDL 425
KEL+ + + L A EKE A + SVA+ D+
Sbjct: 308 ELKELKLKCSNLEAQLEKEKADV--SVARAPFSFDDI 342
>TAIR|locus:2085460 [details] [associations]
symbol:AT3G58220 "AT3G58220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002083
InterPro:IPR008974 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
EMBL:CP002686 SUPFAM:SSF49599 IPI:IPI01020271 RefSeq:NP_001118854.1
UniGene:At.26457 ProteinModelPortal:F4J4P8 SMR:F4J4P8
EnsemblPlants:AT3G58220.2 GeneID:824991 KEGG:ath:AT3G58220
OMA:FEYESEA Uniprot:F4J4P8
Length = 453
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 73/318 (22%), Positives = 123/318 (38%)
Query: 121 AVDKVAVGGQKANGQHARSENYPKKKVES---ENGKSFS-RP-EHFSREIHPEDHSLNKE 175
A +++ G K ++ E Y K+ E E+ + + RP E F E E +E
Sbjct: 146 AAIEISEEGSKEGYEYESEEVYKKESEEGYKYESEEDYEKRPIERFEYESEAESKKDYEE 205
Query: 176 KVRSTQSVPPSENIKMNDMSKSPPK--ESVTSLPGASPSKNGKDNKVQAPIEIHH---ST 230
+ R SE + D + P + E + S+ G + + E S
Sbjct: 206 RTRGGFEYE-SEPVSKKDYEERPRESFEYESEAESKKDSEEGSRERYEYESEEESKKDSE 264
Query: 231 EDGGEDIPSPAD-GSR---NFSFSGIDLASGDSDDEEAQSVISDSVSVGKYHVRAXXXXX 286
D GE+ ++ GSR + + S DS ++ Q + +++ + + V
Sbjct: 265 NDCGEESEKDSEEGSRPLKKIKRNDDGVKSNDSVNKTQQ--VKETMDINGFQVLPSQVTL 322
Query: 287 XXXXXXRYGDIAANCNLESNSMRAYYLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDV 346
+Y DIA N ++ +R + L S+++ L S +++ + E L V
Sbjct: 323 VSRILKKYPDIALGFNAKNRHLRTACMNVLISLIETL-CQSPQELSDEDMDEADNALVYV 381
Query: 347 ESAQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEK 406
+ A VDWL L E+ E QT K L E K+ + ++ AL EK
Sbjct: 382 QDAGFKVDWLDKKLKEVKEK---KVVEQT---GKTRIQELEEELKEFKQKCLDREALLEK 435
Query: 407 EVAGLKESVAKTKARLSD 424
E A K A+ L D
Sbjct: 436 EKA--KVLAARASLTLDD 451
>TAIR|locus:2085325 [details] [associations]
symbol:AT3G58400 "AT3G58400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR002083 InterPro:IPR008974
PROSITE:PS50144 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF49599 EMBL:AL137081 eggNOG:KOG1987 HOGENOM:HOG000064658
IPI:IPI00540716 PIR:T46000 RefSeq:NP_191399.1 UniGene:At.53990
ProteinModelPortal:Q9M2H6 EnsemblPlants:AT3G58400.1 GeneID:825009
KEGG:ath:AT3G58400 TAIR:At3g58400 InParanoid:Q9M2H6
PhylomeDB:Q9M2H6 Genevestigator:Q9M2H6 Uniprot:Q9M2H6
Length = 316
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/170 (24%), Positives = 83/170 (48%)
Query: 257 GDSDDEEAQSVISDSVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECL 316
GD D E S + +++ V + + R+ +IA+ + +++S+R Y+ L
Sbjct: 156 GDVDVSEGISTVKETIHVNGFQLLPSQAKSVSHIFERHPEIASEIHPKNSSLRTGYMSLL 215
Query: 317 CSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTI 376
S+++ L S S +++K + ++ + +++A +DWL N L E++ Q +
Sbjct: 216 LSLIETL-SQSPQELSKDDLCDVYIAIGCMKNAGFKLDWLENKLYEVA-------QKKED 267
Query: 377 DAAKANCVNLLESTKKELESQMNEL-ALKEKEVAGLKESVAKTKARLSDL 425
D A + +E K+L+ + +++ AL E+E A K S AK D+
Sbjct: 268 DEAGETRLREMEEKLKDLKLKCSKMEALVEEEKA--KVSAAKAHLSFDDV 315
>TAIR|locus:2039395 [details] [associations]
symbol:AT2G16860 "AT2G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 EMBL:AC005825 EMBL:AC005167 KO:K12868
HOGENOM:HOG000190170 InterPro:IPR013260 PANTHER:PTHR13264
Pfam:PF08231 OMA:PECINSS EMBL:AY099601 EMBL:AY128842
IPI:IPI00535385 PIR:B84545 RefSeq:NP_565396.1 UniGene:At.12859
PRIDE:Q9ZVX7 EnsemblPlants:AT2G16860.1 GeneID:816187
KEGG:ath:AT2G16860 TAIR:At2g16860 InParanoid:Q9ZVX7
PhylomeDB:Q9ZVX7 ProtClustDB:CLSN2688176 ArrayExpress:Q9ZVX7
Genevestigator:Q9ZVX7 Uniprot:Q9ZVX7
Length = 298
Score = 127 (49.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 5 ERKVNPNCIKASNPYHECGERCFKRNGEANALGFKKQS 42
ER+V+P+CI ASNPYHEC E CFK+ EA A F+KQ+
Sbjct: 4 ERRVHPDCINASNPYHECVEYCFKKIAEAKAR-FEKQN 40
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 61 RKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESG 98
R+V P CI ASNPYHEC E+CFK+ EA AR + +G
Sbjct: 5 RRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTG 42
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 405 EKEVAGLKESVAKTKARLSDLELESNRLEQ 434
EK+ GL + +T+ L D +E + E+
Sbjct: 37 EKQNTGLAKVHEQTREPLDDKRIEEDSSEE 66
>TAIR|locus:2085390 [details] [associations]
symbol:AT3G58360 "AT3G58360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917
PROSITE:PS50144 SMART:SM00061 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF49599 EMBL:AL137081
eggNOG:KOG1987 HOGENOM:HOG000064658 IPI:IPI00532383 PIR:T45996
RefSeq:NP_191395.1 UniGene:At.53988 ProteinModelPortal:Q9M2I0
EnsemblPlants:AT3G58360.1 GeneID:825005 KEGG:ath:AT3G58360
TAIR:At3g58360 InParanoid:Q9M2I0 PhylomeDB:Q9M2I0
ProtClustDB:CLSN2684721 Genevestigator:Q9M2I0 Uniprot:Q9M2I0
Length = 298
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 257 GDSDDEEAQSVISDSVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECL 316
G D E S I +S+ + + ++ +IA+ L++ ++RA Y+ L
Sbjct: 138 GKLDVSEETSTIMESMDFNGFQLLPSQVDFVRHMFEKHPEIASEFRLKNPNLRAGYMSLL 197
Query: 317 CSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISE------AIEFS 370
S+++ L+ S ++ K + E L+ + A VDWL L EISE A E
Sbjct: 198 LSLIETLRQ-SPQELNKVDLAEGYVALRSITDAGFKVDWLEKKLVEISEKKNKEEAGETR 256
Query: 371 TQ--HQTIDAAKANCVNL---LESTKKELESQMNELALKE 405
Q ++ +++ K C++L LE K E+ + + L+ +
Sbjct: 257 MQEINEELESLKQKCLDLEAQLEKEKAEVFAAKSPLSFND 296
>RGD|1306536 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=ISO]
RGD:1306536 GeneTree:ENSGT00530000063895 IPI:IPI00951128
PhosphoSite:F1M853 Ensembl:ENSRNOT00000055602 ArrayExpress:F1M853
Uniprot:F1M853
Length = 1324
Score = 90 (36.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 40/159 (25%), Positives = 81/159 (50%)
Query: 299 ANCNLESNSMRAY-YLECLCSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLR 357
++ NL +++ +A + + + +LQS+ + K+K +E+ + ++ A+ + L
Sbjct: 818 SHANLRADAEKAQEQQQRVAELHSKLQSSEVE--VKSKCEELSDLHGQLKEARAENSQLT 875
Query: 358 NILNEISEAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEVAGLKESVAK 417
+ I +E + Q Q A++A + ++ KELESQ++ L EKE + LKE++ +
Sbjct: 876 ERIRSIEALLE-AGQAQDSQASRAEA-DQQQTRLKELESQVSCL---EKETSELKEAMEQ 930
Query: 418 TKARLSDLELESN--RLEQIIQATQSKVTKFSQKSLADE 454
K + +DL E N +E + A ++ K + A E
Sbjct: 931 QKGKNNDLR-EKNWKAMEALALAERACEEKLRSLTQAKE 968
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 47/206 (22%), Positives = 82/206 (39%)
Query: 37 GFKKQSDNHNGV-TEGVISVKKNEGRKVDPTCIKASNPYHECGEHCFKRNGEANARGVNK 95
G + Q G +G +N+GRK + T A E ++ K+ ++G K
Sbjct: 376 GAQNQGKKGEGAQNQGKKGEGQNQGRKAEGT--PAQGKKMEAAQNQGKKAEGVQSQG-KK 432
Query: 96 ESGSWSFGRKNKASDSQ----PGTPLTPRAVDKVAVGGQKANG---QHARSENYPK--KK 146
GS + G+K + +Q G P R D VA G K G Q +SE P KK
Sbjct: 433 GEGSQNQGKKGDGNPNQGKKGEGAPNQNRKTDTVANQGTKTEGVSNQVKKSEGSPNQGKK 492
Query: 147 VES--ENGKSFSRPEHFSREIHPEDHSLNKEKVRSTQSVPPSENIKMNDMSKSPPKESVT 204
E GK + ++++ D + + K +S + +N M ++P +E+
Sbjct: 493 AEGAPNQGKKVEGSPNQAKKV---DAAAGQGK-KSEMTPAQGKNASMVQSQEAPKQEAPA 548
Query: 205 SLPGASPSKNGKDNKVQAPIEIHHST 230
+ G + +P+ + + T
Sbjct: 549 KKKSKKKGEPGPPD-CDSPLFLPYKT 573
>TAIR|locus:2085350 [details] [associations]
symbol:AT3G58330 "AT3G58330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 EMBL:AL137081 InterPro:IPR007942
Pfam:PF05278 EMBL:DQ446776 IPI:IPI00541618 PIR:T45993
RefSeq:NP_191392.1 UniGene:At.65290 EnsemblPlants:AT3G58330.1
GeneID:825002 KEGG:ath:AT3G58330 TAIR:At3g58330 OMA:KNAYMDV
PhylomeDB:Q9M2I3 ProtClustDB:CLSN2684716 ArrayExpress:Q9M2I3
Genevestigator:Q9M2I3 Uniprot:Q9M2I3
Length = 173
Score = 111 (44.1 bits), Expect = 0.00025, P = 0.00025
Identities = 37/165 (22%), Positives = 69/165 (41%)
Query: 253 DLASGDSDDEEAQSVISDSVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYY 312
D GD + S ++V V +HV ++ D+ +N +L++ ++ Y
Sbjct: 11 DSDDGDFSPSQDSSEDEETVEVNGFHVLPSQENLVSQMLKKHPDLTSNFDLKNQQLKNAY 70
Query: 313 LECLCSVVQEL-QSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEIS------- 364
++ L + + L QST + M E + L D+ A + V WLR L+E
Sbjct: 71 MDVLVDISETLSQSTKALSMEDLDKAE--STLFDLTKAGLKVGWLRQKLDEAYLKKEKQR 128
Query: 365 -EAIEFSTQHQTIDAAKANCVNLLESTKKELESQMNELALKEKEV 408
+ + ++ K +L KKE +Q++ LK++ V
Sbjct: 129 ISGVRIRELEEQVNKRKLTLSDLESDLKKEKANQLSMAQLKKRMV 173
>GENEDB_PFALCIPARUM|PF14_0404 [details] [associations]
symbol:PF14_0404 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 51/249 (20%), Positives = 91/249 (36%)
Query: 2 KNEERKVNPNCIKASNPYHECGERCFKRN--GEANALGFKKQSDNHNGVTEGVISVKKNE 59
K+ E N N + N ++ + N E N Q ++ + + KN
Sbjct: 1300 KSSEENANDNIMTEKNGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNIMTEEYEKNKNS 1359
Query: 60 GRKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQPGTPLTP 119
D + N ++ E N G K+ S N ++ +
Sbjct: 1360 QENTDDNIMTEKNGKNKSSEENTDDNIMTEKNG--KDKSSEENANDNVMTEKNGKNKSSE 1417
Query: 120 RAVDKVAVGGQKANGQHARSE-NYPKKKVESENGKSFSRPEHFSREIHPEDHSLNKEKVR 178
D + + NG++ SE N + ENGK+ S E+ I E++ NK
Sbjct: 1418 ENADDNIM--TEKNGKNKSSEENADDNIIREENGKNKSSQENSDDNIMTEEYGENKNSHE 1475
Query: 179 STQSVPPSENIKMNDMSKSP-PKESVTSLPGASPSKNGKDNKVQAPIEIHHSTEDGGEDI 237
+++ +NI + K+ P+E++ P KNG++ Q + + TE GE+
Sbjct: 1476 NSE-----DNIMTEEYGKNKSPQENIDD--NIIPEKNGENKNSQQNSDHNIMTEKNGENK 1528
Query: 238 PSPADGSRN 246
S + N
Sbjct: 1529 NSQQNSDHN 1537
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 325 STSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCV 384
+T++ + K+KE M+ +K++E D + N NE I+ + +H I
Sbjct: 2478 NTNMDSVNDDKIKEEMSHIKNMEYVVDSFDKIDNAPNE-QNIIDHNGKHSVIKG------ 2530
Query: 385 NLLESTKKELES--QMNELA--LKEKEVAGLKESVAKTKARLSDLELESNRLEQ 434
+ E TK E E+ QMNE +KE+E+ +++ K + S E ++ E+
Sbjct: 2531 EIKEDTKHEKENAKQMNEEIKNVKEQEIEHERKNETKEEKEQSIKEGKNKEFEE 2584
>UNIPROTKB|Q8IL45 [details] [associations]
symbol:TREP "TRAP-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 51/249 (20%), Positives = 91/249 (36%)
Query: 2 KNEERKVNPNCIKASNPYHECGERCFKRN--GEANALGFKKQSDNHNGVTEGVISVKKNE 59
K+ E N N + N ++ + N E N Q ++ + + KN
Sbjct: 1300 KSSEENANDNIMTEKNGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNIMTEEYEKNKNS 1359
Query: 60 GRKVDPTCIKASNPYHECGEHCFKRNGEANARGVNKESGSWSFGRKNKASDSQPGTPLTP 119
D + N ++ E N G K+ S N ++ +
Sbjct: 1360 QENTDDNIMTEKNGKNKSSEENTDDNIMTEKNG--KDKSSEENANDNVMTEKNGKNKSSE 1417
Query: 120 RAVDKVAVGGQKANGQHARSE-NYPKKKVESENGKSFSRPEHFSREIHPEDHSLNKEKVR 178
D + + NG++ SE N + ENGK+ S E+ I E++ NK
Sbjct: 1418 ENADDNIM--TEKNGKNKSSEENADDNIIREENGKNKSSQENSDDNIMTEEYGENKNSHE 1475
Query: 179 STQSVPPSENIKMNDMSKSP-PKESVTSLPGASPSKNGKDNKVQAPIEIHHSTEDGGEDI 237
+++ +NI + K+ P+E++ P KNG++ Q + + TE GE+
Sbjct: 1476 NSE-----DNIMTEEYGKNKSPQENIDD--NIIPEKNGENKNSQQNSDHNIMTEKNGENK 1528
Query: 238 PSPADGSRN 246
S + N
Sbjct: 1529 NSQQNSDHN 1537
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 325 STSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTIDAAKANCV 384
+T++ + K+KE M+ +K++E D + N NE I+ + +H I
Sbjct: 2478 NTNMDSVNDDKIKEEMSHIKNMEYVVDSFDKIDNAPNE-QNIIDHNGKHSVIKG------ 2530
Query: 385 NLLESTKKELES--QMNELA--LKEKEVAGLKESVAKTKARLSDLELESNRLEQ 434
+ E TK E E+ QMNE +KE+E+ +++ K + S E ++ E+
Sbjct: 2531 EIKEDTKHEKENAKQMNEEIKNVKEQEIEHERKNETKEEKEQSIKEGKNKEFEE 2584
>TAIR|locus:2085375 [details] [associations]
symbol:RTM3 "AT3G58350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009615 "response to virus"
evidence=IMP] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917
PROSITE:PS50144 SMART:SM00061 EMBL:CP002686 GO:GO:0009615
SUPFAM:SSF49599 EMBL:GU396210 EMBL:GU396220 EMBL:FR681938
EMBL:FR681941 EMBL:FR681944 EMBL:FR681947 EMBL:FR681960
EMBL:FR681961 EMBL:FR681962 IPI:IPI00523533 RefSeq:NP_567063.1
UniGene:At.53987 ProteinModelPortal:D5K228 SMR:D5K228
EnsemblPlants:AT3G58350.1 GeneID:825004 KEGG:ath:AT3G58350
OMA:KCLEMEA Uniprot:D5K228
Length = 301
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 40/170 (23%), Positives = 78/170 (45%)
Query: 257 GDSDDEEAQSVISDSVSVGKYHVRAXXXXXXXXXXXRYGDIAANCNLESNSMRAYYLECL 316
G D E S I+++V V + + ++ ++A++ ++ ++R Y+ L
Sbjct: 141 GKLDVTEETSTITETVDVNGFQLLPSQAKSVSRMFAKHPELASDLRPKNPNLRTGYMSLL 200
Query: 317 CSVVQELQSTSLMQMTKAKVKEMMAVLKDVESAQIDVDWLRNILNEISEAIEFSTQHQTI 376
S+++ L QM+K + + L + A +DWL L E+SE + +
Sbjct: 201 LSLIETLSQLP-QQMSKDDLLDAYDALGSMRDAGFKLDWLEKKLYEVSE------KKENE 253
Query: 377 DAAKANCVNLLESTKKELESQMNEL-ALKEKEVAGLKESVAKTKARLSDL 425
+A++ + +E K+++ + E+ AL EKE A K S AK D+
Sbjct: 254 EASETG-LQEMEEELKDMKQKCLEMEALVEKEKA--KVSTAKAPISFDDI 300
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.124 0.346 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 445 0.00091 118 3 11 23 0.38 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 605 (64 KB)
Total size of DFA: 260 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.10u 0.11s 49.21t Elapsed: 00:00:02
Total cpu time: 49.11u 0.11s 49.22t Elapsed: 00:00:02
Start: Sat May 11 15:05:30 2013 End: Sat May 11 15:05:32 2013