Query 012817
Match_columns 456
No_of_seqs 251 out of 3523
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:48:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012817.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012817hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 2.4E-45 8.2E-50 373.7 30.5 352 2-431 20-416 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 8.7E-43 3E-47 351.5 28.9 343 2-431 12-391 (420)
3 3st8_A Bifunctional protein GL 100.0 4.2E-41 1.4E-45 346.4 38.2 355 3-449 13-447 (501)
4 2ggo_A 401AA long hypothetical 100.0 4.1E-40 1.4E-44 330.2 28.6 316 3-429 1-329 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.2E-38 4.2E-43 325.9 34.4 329 3-432 12-361 (468)
6 4fce_A Bifunctional protein GL 100.0 7E-38 2.4E-42 319.6 33.6 199 1-245 7-212 (459)
7 2v0h_A Bifunctional protein GL 100.0 1.5E-37 5E-42 316.9 33.0 312 1-412 4-332 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 4.1E-30 1.4E-34 245.0 19.4 241 1-333 1-272 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1E-27 3.5E-32 226.8 23.1 234 2-332 24-260 (269)
10 1tzf_A Glucose-1-phosphate cyt 100.0 7.1E-27 2.4E-31 219.8 21.4 228 1-331 1-250 (259)
11 2ux8_A Glucose-1-phosphate uri 99.9 6.1E-27 2.1E-31 224.7 17.5 187 2-223 14-226 (297)
12 3pnn_A Conserved domain protei 99.9 3.8E-26 1.3E-30 219.5 21.9 252 1-329 4-289 (303)
13 2e3d_A UTP--glucose-1-phosphat 99.9 4.4E-26 1.5E-30 219.3 22.0 236 2-332 8-282 (302)
14 2pa4_A UTP-glucose-1-phosphate 99.9 2.6E-26 9.1E-31 222.7 20.2 240 2-332 12-283 (323)
15 1fxo_A Glucose-1-phosphate thy 99.9 1.8E-25 6E-30 213.6 19.9 185 1-223 1-186 (293)
16 4evw_A Nucleoside-diphosphate- 99.9 1.6E-25 5.5E-30 209.6 19.0 195 5-245 2-216 (255)
17 1lvw_A Glucose-1-phosphate thy 99.9 1.1E-24 3.7E-29 208.1 23.5 184 2-223 3-187 (295)
18 1mc3_A Glucose-1-phosphate thy 99.9 8.5E-25 2.9E-29 208.9 19.3 184 2-223 3-187 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 99.9 8.5E-25 2.9E-29 210.7 19.0 191 1-224 3-202 (308)
20 2x65_A Mannose-1-phosphate gua 99.9 1.9E-23 6.6E-28 203.0 17.1 190 3-224 2-204 (336)
21 3oam_A 3-deoxy-manno-octuloson 99.9 1.6E-22 5.5E-27 189.0 18.6 191 1-226 1-198 (252)
22 2cu2_A Putative mannose-1-phos 99.9 1.2E-22 4.2E-27 197.4 14.6 186 1-224 1-201 (337)
23 1jyk_A LICC protein, CTP:phosp 99.9 3.5E-22 1.2E-26 187.0 16.6 166 1-222 24-192 (254)
24 3k8d_A 3-deoxy-manno-octuloson 99.8 3.5E-20 1.2E-24 173.6 18.8 190 1-225 17-213 (264)
25 3tqd_A 3-deoxy-manno-octuloson 99.8 9.6E-20 3.3E-24 169.8 18.5 191 1-225 8-206 (256)
26 2y6p_A 3-deoxy-manno-octuloson 99.8 8E-18 2.7E-22 155.3 20.5 177 1-225 1-182 (234)
27 4fcu_A 3-deoxy-manno-octuloson 99.8 2.5E-18 8.4E-23 160.1 15.4 187 3-224 2-197 (253)
28 1h7e_A 3-deoxy-manno-octuloson 99.8 2.1E-17 7.2E-22 153.6 20.5 123 1-140 1-129 (245)
29 1vic_A 3-deoxy-manno-octuloson 99.8 2.5E-17 8.7E-22 154.7 19.0 189 1-224 1-200 (262)
30 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 1E-16 3.4E-21 158.2 20.5 75 105-221 12-89 (374)
31 3f1c_A Putative 2-C-methyl-D-e 99.7 1E-16 3.4E-21 149.1 16.1 127 2-135 3-139 (246)
32 1ezi_A CMP-N-acetylneuraminic 99.7 1.1E-16 3.8E-21 147.1 14.4 124 1-140 3-136 (228)
33 2icy_A Probable UTP-glucose-1- 99.7 8.2E-16 2.8E-20 153.9 21.3 193 2-226 79-310 (469)
34 2vsh_A TARI, 2-C-methyl-D-eryt 99.7 2.9E-16 9.8E-21 145.0 16.7 123 3-131 3-136 (236)
35 2xwl_A 2-C-methyl-D-erythritol 99.7 1.1E-15 3.7E-20 139.9 19.7 125 1-138 1-129 (223)
36 2dpw_A Hypothetical protein TT 99.7 6.9E-17 2.4E-21 148.9 11.4 118 1-139 1-120 (232)
37 2xme_A CTP-inositol-1-phosphat 99.7 7.6E-16 2.6E-20 141.9 17.4 103 2-116 18-121 (232)
38 2yc3_A 2-C-methyl-D-erythritol 99.7 7.2E-16 2.5E-20 141.6 15.2 120 2-131 4-128 (228)
39 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 3.2E-15 1.1E-19 138.3 16.5 138 308-448 45-200 (240)
40 1vgw_A 4-diphosphocytidyl-2C-m 99.6 6.9E-15 2.4E-19 135.3 17.6 119 1-130 5-133 (231)
41 3ixc_A Hexapeptide transferase 99.6 7.5E-15 2.6E-19 130.9 15.6 108 341-448 29-147 (191)
42 1xhd_A Putative acetyltransfer 99.6 1.1E-14 3.9E-19 127.6 15.8 107 342-448 9-125 (173)
43 3tv0_A Dynactin subunit 6; LEF 99.6 1.5E-14 5.1E-19 129.3 15.8 108 343-450 10-139 (194)
44 1qwj_A Cytidine monophospho-N- 99.6 6.1E-15 2.1E-19 135.6 13.5 122 1-138 2-132 (229)
45 3rsb_A Adenosylcobinamide-phos 99.6 7.8E-16 2.7E-20 138.0 6.5 128 3-139 1-135 (196)
46 1i52_A 4-diphosphocytidyl-2-C- 99.6 3.8E-14 1.3E-18 130.8 17.6 119 1-130 6-128 (236)
47 3mqg_A Lipopolysaccharides bio 99.6 2.7E-14 9.2E-19 127.5 15.6 107 342-448 12-137 (192)
48 3r3r_A Ferripyochelin binding 99.6 2.1E-14 7.2E-19 127.6 14.6 105 344-448 14-135 (187)
49 1v3w_A Ferripyochelin binding 99.6 3E-14 1E-18 125.0 14.9 105 344-448 9-123 (173)
50 2wee_A MOBA-related protein; u 99.6 8.1E-15 2.8E-19 131.3 11.4 112 1-125 4-120 (197)
51 3kwd_A Carbon dioxide concentr 99.6 2.6E-14 8.9E-19 129.8 14.4 84 364-447 80-179 (213)
52 2waw_A MOBA relate protein; un 99.6 1.2E-14 4.2E-19 130.2 11.7 118 1-133 4-126 (199)
53 1vpa_A 2-C-methyl-D-erythritol 99.6 9.4E-14 3.2E-18 127.9 17.4 119 2-131 13-137 (234)
54 3q80_A 2-C-methyl-D-erythritol 99.6 3.5E-13 1.2E-17 123.5 20.8 113 3-128 8-127 (231)
55 3kwd_A Carbon dioxide concentr 99.6 5E-14 1.7E-18 127.8 15.0 105 345-449 39-164 (213)
56 2i5k_A UTP--glucose-1-phosphat 99.6 5.5E-14 1.9E-18 141.5 16.5 192 2-226 92-323 (488)
57 3r1w_A Carbonic anhydrase; bet 99.5 6.1E-14 2.1E-18 124.8 14.6 104 345-448 19-139 (189)
58 2ggo_A 401AA long hypothetical 99.5 3.3E-14 1.1E-18 141.9 14.2 116 334-449 251-392 (401)
59 3vbi_A ANTD, galactoside O-ace 99.5 1.6E-14 5.6E-19 130.3 10.4 103 347-449 34-170 (205)
60 1qre_A Carbonic anhydrase; bet 99.5 8.6E-14 2.9E-18 129.2 15.3 69 381-449 141-210 (247)
61 2px7_A 2-C-methyl-D-erythritol 99.5 1.5E-13 5.3E-18 126.7 16.4 112 1-132 24-137 (236)
62 3fs8_A QDTC; acetyltransferase 99.5 1.8E-13 6.1E-18 129.2 17.0 115 334-448 9-141 (273)
63 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 2.5E-13 8.7E-18 133.2 18.7 15 415-429 223-237 (372)
64 2qia_A UDP-N-acetylglucosamine 99.5 1.8E-13 6.3E-18 128.3 16.8 50 346-395 18-68 (262)
65 4eqy_A Acyl-[acyl-carrier-prot 99.5 1.5E-13 5.2E-18 130.2 16.4 69 380-448 100-178 (283)
66 3r0s_A Acyl-[acyl-carrier-prot 99.5 2.4E-13 8.2E-18 127.6 17.5 113 336-448 25-161 (266)
67 3r0s_A Acyl-[acyl-carrier-prot 99.5 2.2E-13 7.7E-18 127.8 16.9 109 342-450 13-145 (266)
68 4e79_A UDP-3-O-acylglucosamine 99.5 3.4E-13 1.2E-17 131.7 18.7 66 347-412 116-183 (357)
69 3bfp_A Acetyltransferase; LEFT 99.5 2.7E-13 9.4E-18 121.0 16.4 120 316-448 54-178 (194)
70 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 4.1E-13 1.4E-17 130.5 19.0 69 344-412 108-178 (341)
71 1j2z_A Acyl-[acyl-carrier-prot 99.5 2.6E-13 8.9E-18 127.5 16.7 50 346-395 14-64 (270)
72 1qre_A Carbonic anhydrase; bet 99.5 1.7E-13 5.9E-18 127.1 15.2 104 344-447 58-191 (247)
73 4e6u_A Acyl-[acyl-carrier-prot 99.5 2.4E-13 8.1E-18 127.7 16.2 104 344-447 36-162 (265)
74 4eqy_A Acyl-[acyl-carrier-prot 99.5 2.2E-13 7.7E-18 129.0 15.7 83 366-448 103-196 (283)
75 3hsq_A Acyl-[acyl-carrier-prot 99.5 3.3E-13 1.1E-17 126.2 16.7 50 398-447 122-173 (259)
76 3c8v_A Putative acetyltransfer 99.5 1.2E-13 4.2E-18 138.9 13.8 102 346-447 274-380 (496)
77 4e6u_A Acyl-[acyl-carrier-prot 99.5 3.8E-13 1.3E-17 126.2 16.4 86 363-448 85-181 (265)
78 3d5n_A Q97W15_sulso; NESG, SSR 99.5 4.5E-14 1.5E-18 126.6 9.3 114 1-133 1-118 (197)
79 3hsq_A Acyl-[acyl-carrier-prot 99.5 6.1E-13 2.1E-17 124.4 17.2 111 339-449 24-157 (259)
80 2pig_A Putative transferase; S 99.5 2.6E-14 9E-19 137.2 7.6 137 313-449 26-197 (334)
81 1jv1_A Glcnac1P uridyltransfer 99.5 5.9E-13 2E-17 134.6 17.6 194 2-226 102-344 (505)
82 4ea9_A Perosamine N-acetyltran 99.5 4.6E-13 1.6E-17 122.1 14.9 97 346-447 100-199 (220)
83 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 9.9E-13 3.4E-17 129.0 17.5 12 209-220 77-88 (372)
84 1xhd_A Putative acetyltransfer 99.5 3.5E-13 1.2E-17 118.1 12.9 103 344-446 29-142 (173)
85 3t57_A UDP-N-acetylglucosamine 99.5 9.1E-13 3.1E-17 126.1 16.6 15 381-395 78-92 (305)
86 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 1E-12 3.5E-17 127.7 16.9 68 381-448 201-275 (341)
87 3mqg_A Lipopolysaccharides bio 99.5 1.1E-12 3.7E-17 117.0 15.6 32 421-452 103-135 (192)
88 1j2z_A Acyl-[acyl-carrier-prot 99.5 9.4E-13 3.2E-17 123.7 15.9 67 381-447 105-174 (270)
89 1v3w_A Ferripyochelin binding 99.5 3.3E-13 1.1E-17 118.2 11.7 102 345-446 28-140 (173)
90 3bfp_A Acetyltransferase; LEFT 99.5 1.3E-12 4.4E-17 116.6 15.7 96 344-444 80-180 (194)
91 4e79_A UDP-3-O-acylglucosamine 99.5 1.2E-12 4E-17 127.9 16.6 68 381-448 206-280 (357)
92 2qia_A UDP-N-acetylglucosamine 99.5 1.6E-12 5.3E-17 121.9 16.6 109 340-448 30-179 (262)
93 1e5k_A Molybdopterin-guanine d 99.5 2.8E-13 9.6E-18 121.7 10.8 108 1-125 5-116 (201)
94 3tv0_A Dynactin subunit 6; LEF 99.4 1E-12 3.6E-17 117.3 14.4 79 364-442 52-149 (194)
95 4ea9_A Perosamine N-acetyltran 99.4 1.7E-12 5.7E-17 118.4 15.6 86 341-426 101-189 (220)
96 3ixc_A Hexapeptide transferase 99.4 1.1E-12 3.8E-17 116.8 13.6 76 365-440 74-157 (191)
97 3r3r_A Ferripyochelin binding 99.4 5.2E-13 1.8E-17 118.6 11.2 97 344-440 32-145 (187)
98 3eg4_A 2,3,4,5-tetrahydropyrid 99.4 9.4E-13 3.2E-17 125.1 13.4 103 344-447 140-267 (304)
99 3fs8_A QDTC; acetyltransferase 99.4 2.8E-12 9.6E-17 120.9 16.4 68 381-448 89-159 (273)
100 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 1.6E-12 5.6E-17 120.1 13.8 99 341-440 99-208 (240)
101 2pig_A Putative transferase; S 99.4 8.7E-13 3E-17 126.6 11.9 109 339-448 77-218 (334)
102 3vbi_A ANTD, galactoside O-ace 99.4 8.5E-13 2.9E-17 119.0 11.1 112 328-440 33-177 (205)
103 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 4.5E-12 1.5E-16 124.8 17.0 15 432-446 305-319 (374)
104 3tk8_A 2,3,4,5-tetrahydropyrid 99.4 3.1E-12 1.1E-16 121.9 14.8 91 345-436 151-253 (316)
105 3r5d_A Tetrahydrodipicolinate 99.4 4.6E-13 1.6E-17 125.4 8.9 99 344-449 183-290 (347)
106 3t57_A UDP-N-acetylglucosamine 99.4 5.9E-12 2E-16 120.5 16.6 35 414-448 168-203 (305)
107 3r1w_A Carbonic anhydrase; bet 99.4 1.4E-12 4.7E-17 116.0 11.4 97 344-440 36-149 (189)
108 3gos_A 2,3,4,5-tetrahydropyrid 99.4 2.5E-12 8.5E-17 120.9 13.0 102 345-446 110-235 (276)
109 1w55_A ISPD/ISPF bifunctional 99.4 9.9E-13 3.4E-17 128.5 10.5 114 1-130 2-118 (371)
110 3gos_A 2,3,4,5-tetrahydropyrid 99.4 4.7E-12 1.6E-16 119.0 14.8 98 345-448 104-212 (276)
111 3eg4_A 2,3,4,5-tetrahydropyrid 99.4 4.6E-12 1.6E-16 120.3 14.8 94 344-438 134-239 (304)
112 2e8b_A Probable molybdopterin- 99.4 6.7E-13 2.3E-17 119.3 7.8 103 2-123 14-120 (201)
113 3fsy_A Tetrahydrodipicolinate 99.4 1.9E-12 6.4E-17 120.4 10.3 31 415-446 234-264 (332)
114 1hm9_A GLMU, UDP-N-acetylgluco 99.4 2.2E-12 7.6E-17 131.2 11.8 86 363-449 309-420 (468)
115 3ngw_A Molybdopterin-guanine d 99.4 2E-12 6.9E-17 116.5 10.0 114 3-135 1-117 (208)
116 3c8v_A Putative acetyltransfer 99.4 3.2E-12 1.1E-16 128.6 12.1 97 344-441 290-394 (496)
117 3tk8_A 2,3,4,5-tetrahydropyrid 99.4 5.5E-12 1.9E-16 120.2 13.0 88 342-430 154-252 (316)
118 2v0h_A Bifunctional protein GL 99.3 3.3E-12 1.1E-16 129.5 12.0 83 366-448 303-429 (456)
119 3jqy_B NEUO, polysialic acid O 99.3 4E-12 1.4E-16 118.2 11.0 31 416-446 165-196 (252)
120 3fsy_A Tetrahydrodipicolinate 99.3 9.9E-12 3.4E-16 115.6 11.5 88 342-430 164-265 (332)
121 3nz2_A Hexapeptide-repeat cont 99.3 7.9E-12 2.7E-16 111.5 9.4 51 344-397 61-113 (195)
122 2wlg_A Polysialic acid O-acety 99.3 1.7E-11 6E-16 111.1 11.4 103 346-448 37-172 (215)
123 3r5d_A Tetrahydrodipicolinate 99.3 1.2E-11 4E-16 115.9 10.3 89 340-429 185-287 (347)
124 2rij_A Putative 2,3,4,5-tetrah 99.3 2.4E-11 8.3E-16 117.3 12.4 134 309-450 168-325 (387)
125 3jqy_B NEUO, polysialic acid O 99.2 3.3E-11 1.1E-15 112.0 11.3 95 345-440 85-206 (252)
126 3ftt_A Putative acetyltransfer 99.2 1.9E-11 6.5E-16 109.4 9.2 85 344-431 59-165 (199)
127 4fce_A Bifunctional protein GL 99.2 2.4E-11 8.4E-16 123.1 10.9 26 300-327 213-240 (459)
128 3brk_X Glucose-1-phosphate ade 99.2 3.3E-11 1.1E-15 120.7 11.1 99 350-450 295-393 (420)
129 3srt_A Maltose O-acetyltransfe 99.2 6.7E-11 2.3E-15 104.8 11.4 87 343-432 60-168 (188)
130 3hjj_A Maltose O-acetyltransfe 99.2 1.2E-10 4E-15 103.5 12.9 50 345-397 64-115 (190)
131 3st8_A Bifunctional protein GL 99.2 9.1E-11 3.1E-15 120.2 14.0 110 341-450 279-430 (501)
132 2oeg_A UTP-glucose-1-phosphate 99.2 7.6E-11 2.6E-15 118.5 12.5 134 2-141 75-250 (505)
133 3q1x_A Serine acetyltransferas 99.2 3.6E-11 1.2E-15 113.9 9.4 87 345-431 163-258 (313)
134 3q1x_A Serine acetyltransferas 99.2 8.5E-11 2.9E-15 111.3 11.2 95 349-449 161-259 (313)
135 1krr_A Galactoside O-acetyltra 99.2 9.6E-11 3.3E-15 104.6 9.6 51 343-396 59-111 (203)
136 1ocx_A Maltose O-acetyltransfe 99.1 3.3E-10 1.1E-14 99.6 12.5 83 345-430 58-162 (182)
137 3mc4_A WW/RSP5/WWP domain:bact 99.1 2.3E-10 7.8E-15 106.7 11.7 96 345-445 164-265 (287)
138 3f1x_A Serine acetyltransferas 99.1 2E-10 6.8E-15 108.6 10.8 90 345-440 190-294 (310)
139 2p2o_A Maltose transacetylase; 99.1 2.1E-10 7E-15 101.2 9.3 94 344-441 59-174 (185)
140 2wlg_A Polysialic acid O-acety 99.1 4.5E-10 1.5E-14 101.8 11.4 95 346-441 59-181 (215)
141 3f1x_A Serine acetyltransferas 99.1 3.7E-10 1.3E-14 106.7 11.1 92 349-447 188-285 (310)
142 2yqc_A UDP-N-acetylglucosamine 99.1 3.4E-09 1.2E-13 106.7 18.1 193 2-225 103-351 (486)
143 3oc9_A UDP-N-acetylglucosamine 99.1 4.6E-09 1.6E-13 102.3 18.3 192 2-224 35-275 (405)
144 4hur_A Virginiamycin A acetylt 99.0 8.1E-10 2.8E-14 100.4 10.9 27 369-395 54-81 (220)
145 2rij_A Putative 2,3,4,5-tetrah 99.0 5E-10 1.7E-14 108.1 9.8 54 341-396 219-274 (387)
146 1ssq_A SAT, serine acetyltrans 99.0 2E-09 6.8E-14 99.7 13.4 85 345-439 137-231 (267)
147 4hur_A Virginiamycin A acetylt 99.0 2.9E-10 9.9E-15 103.3 7.7 33 415-447 120-153 (220)
148 3nz2_A Hexapeptide-repeat cont 99.0 7.7E-10 2.6E-14 98.5 10.3 91 342-432 73-168 (195)
149 1yp2_A Glucose-1-phosphate ade 99.0 4E-10 1.4E-14 114.0 9.4 95 347-449 304-417 (451)
150 3hjj_A Maltose O-acetyltransfe 99.0 7.1E-10 2.4E-14 98.4 9.6 88 344-431 77-169 (190)
151 1t3d_A SAT, serine acetyltrans 99.0 2.9E-09 9.9E-14 99.5 13.2 90 345-440 157-252 (289)
152 3srt_A Maltose O-acetyltransfe 99.0 1.4E-09 4.7E-14 96.3 10.4 36 414-449 132-168 (188)
153 3ftt_A Putative acetyltransfer 99.0 1.2E-09 4E-14 97.7 9.6 34 345-378 74-109 (199)
154 1ssq_A SAT, serine acetyltrans 99.0 1.8E-09 6.3E-14 99.9 9.3 73 341-413 139-223 (267)
155 1t3d_A SAT, serine acetyltrans 98.9 2.6E-09 8.8E-14 99.8 9.3 30 101-130 37-68 (289)
156 1krr_A Galactoside O-acetyltra 98.9 1.1E-08 3.6E-13 91.3 11.9 96 343-439 73-173 (203)
157 1ocx_A Maltose O-acetyltransfe 98.9 3.7E-09 1.3E-13 92.8 8.5 15 364-378 93-107 (182)
158 2p2o_A Maltose transacetylase; 98.8 1.7E-08 6E-13 88.8 10.7 35 344-378 73-109 (185)
159 3eev_A Chloramphenicol acetylt 98.8 7.9E-09 2.7E-13 93.3 6.3 33 398-430 112-145 (212)
160 4e8l_A Virginiamycin A acetylt 98.7 2.7E-08 9.2E-13 89.8 8.4 35 414-448 118-153 (219)
161 4e8l_A Virginiamycin A acetylt 98.7 3.1E-08 1E-12 89.4 8.7 33 398-430 119-152 (219)
162 3eev_A Chloramphenicol acetylt 98.7 3.7E-08 1.3E-12 88.8 9.1 15 381-395 59-73 (212)
163 1xat_A Xenobiotic acetyltransf 98.6 7.3E-08 2.5E-12 86.5 8.4 35 414-448 110-145 (212)
164 1mr7_A Streptogramin A acetylt 98.6 2.4E-08 8.2E-13 89.6 5.1 33 398-430 114-147 (209)
165 1mr7_A Streptogramin A acetylt 98.5 7.5E-08 2.6E-12 86.3 4.6 35 414-448 113-148 (209)
166 1xat_A Xenobiotic acetyltransf 98.4 1.1E-06 3.8E-11 78.7 9.1 43 397-440 110-153 (212)
167 3r3i_A UTP--glucose-1-phosphat 97.9 0.0012 4E-08 66.1 20.2 65 2-71 127-197 (528)
168 2i5e_A Hypothetical protein MM 97.6 6.6E-05 2.3E-09 67.2 6.5 104 2-124 3-111 (211)
169 3gue_A UTP-glucose-1-phosphate 96.1 0.26 8.9E-06 48.9 17.2 133 3-140 77-249 (484)
170 3ogz_A UDP-sugar pyrophosphory 95.7 0.0097 3.3E-07 60.7 5.3 64 3-71 115-183 (630)
171 1qg8_A Protein (spore coat pol 87.8 4.8 0.00016 35.8 11.4 93 34-129 13-116 (255)
172 3bcv_A Putative glycosyltransf 85.4 2.5 8.4E-05 37.3 8.0 101 29-134 11-117 (240)
173 3cgx_A Putative nucleotide-dip 84.0 2.3 7.8E-05 38.3 7.0 87 34-128 37-130 (242)
174 1xhb_A Polypeptide N-acetylgal 79.6 10 0.00035 37.4 10.8 102 29-133 35-146 (472)
175 2d7i_A Polypeptide N-acetylgal 74.6 13 0.00044 37.8 10.0 99 29-131 118-226 (570)
176 2ffu_A Ppgalnact-2, polypeptid 67.4 23 0.00079 35.1 9.8 100 28-132 71-177 (501)
177 2z86_A Chondroitin synthase; G 53.8 40 0.0014 34.4 8.9 96 29-129 381-482 (625)
178 2z86_A Chondroitin synthase; G 48.1 1.1E+02 0.0037 31.0 11.2 102 28-132 98-205 (625)
179 4hg6_A Cellulose synthase subu 41.5 1.2E+02 0.004 32.2 10.3 96 28-128 145-265 (802)
180 3f1y_A Mannosyl-3-phosphoglyce 40.8 36 0.0012 32.6 5.7 109 28-138 99-218 (387)
181 3ckj_A Putative uncharacterize 33.8 2E+02 0.0068 26.3 9.6 104 29-135 54-167 (329)
182 1fo8_A Alpha-1,3-mannosyl-glyc 23.4 2.4E+02 0.0083 26.3 8.1 93 28-125 7-122 (343)
183 2bo4_A Mannosylglycerate synth 21.8 4.1E+02 0.014 25.3 9.5 49 87-136 73-127 (397)
184 2xvy_A Chelatase, putative; me 21.4 1.5E+02 0.005 26.4 6.0 25 33-57 63-87 (269)
185 4fix_A UDP-galactofuranosyl tr 20.8 1.9E+02 0.0066 29.7 7.3 99 29-131 186-298 (657)
186 3l7i_A Teichoic acid biosynthe 20.4 21 0.00073 37.4 0.0 90 35-127 15-109 (729)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=2.4e-45 Score=373.73 Aligned_cols=352 Identities=20% Similarity=0.335 Sum_probs=250.0
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCc-chHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc---cC--
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY---VD-- 75 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gk-pli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~---~~-- 75 (456)
+|+|||||||.|+||+|| |...||+|+|++|+ |||+|+|++|.++|+++++|++++.. +.+.+++.+.+ ..
T Consensus 20 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 96 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPL-TKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS--ASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HEEEEEC------CCTTT-TTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCC--HHHHHHHHHHCC------
T ss_pred ceEEEEECCCCCCcccch-hcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCH--HHHHHHHhhhhhcccccc
Confidence 489999999999999999 88999999999999 99999999999999999999998653 24544443321 10
Q ss_pred --ccceEEEEc--cC-----CcChHHHHHHHHhcCC---CCcEEEEcCCcccCCChhHHHHHHHhcCceEEEEEeecccC
Q 012817 76 --RLHVEVATV--PE-----DVGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVS 143 (456)
Q Consensus 76 --~~~i~~~~~--~~-----~~gt~~al~~~~~~l~---~~~~lv~~~D~i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~ 143 (456)
...+.+... .. ..|++++++.+++.+. +++|++++||++++.++.++++.|++.++++|+++.+.+..
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 176 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEK 176 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHH
T ss_pred cccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChh
Confidence 001334321 11 3799999999887764 46799999999999999999999999899998887765321
Q ss_pred CCccCCCCCCcccCCCCCcccEEEecCCCcEEEEeecccccc--cccccchHHHhhccee-EEecCCccceEEeechHHH
Q 012817 144 GLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELE--KDTRIRKSILRAVGQM-DIRADLMDAHMYAFNRSVL 220 (456)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~--k~~~~~~~~~~~~~~~-~~~~~~~~~giYi~~~~vl 220 (456)
+ +..|+++.+|++++ +..+.++++.+ +...++..++.+++.. ...++++++|+|+|++++|
T Consensus 177 ~---------------~~~~g~v~~d~~~~-v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l 240 (451)
T 1yp2_A 177 R---------------ATAFGLMKIDEEGR-IIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVM 240 (451)
T ss_dssp H---------------HTTSEEEEECTTSB-EEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHH
T ss_pred h---------------cccCCEEEECCCCC-EEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHH
Confidence 1 45689999997766 45555433211 0011111222111110 0024678999999999998
Q ss_pred HHHHhcC-ccccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcc
Q 012817 221 QEVLDQK-DKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRT 299 (456)
Q Consensus 221 ~~~~~~~-~~~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (456)
..++++. ....++.+|+++.+++++
T Consensus 241 ~~~l~~~~~~~~~~~~~~l~~~i~~g------------------------------------------------------ 266 (451)
T 1yp2_A 241 LNLLRDKFPGANDFGSEVIPGATSLG------------------------------------------------------ 266 (451)
T ss_dssp HHHHHTTCTTCCCTTTTHHHHHHHTT------------------------------------------------------
T ss_pred HHHHHhhcccccchHhhHHHHHHhcC------------------------------------------------------
Confidence 7666543 233566678888877542
Q ss_pred eeeEEEEecCcchhhcccCHHHHHHHhHhhhccc-ccc---CCCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCC
Q 012817 300 HKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA-NHL---SGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDK 375 (456)
Q Consensus 300 ~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~l~~~-~~~---~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~ 375 (456)
.++.+| ...++|.+++++++|++++++++.+. ... .....++....++|++.| .++.| .++.||++|.|+.
T Consensus 267 ~~v~~~--~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~- 341 (451)
T 1yp2_A 267 MRVQAY--LYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIKN- 341 (451)
T ss_dssp CCEEEE--ECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEEE-
T ss_pred CceEEE--EeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEE-cceEE-eCeEECCCCEEcc-
Confidence 223444 45679999999999999999987653 111 112223344555555555 45666 5688888888886
Q ss_pred CeEeeeEECCCCEECCCcEEeCeEECCC-------------------CEECCCcEEcCeEECCCCEECCCcEecC
Q 012817 376 CSVKRSVIGRHCRIGSNVKVVNSVVMNH-------------------VTIGDGCSIQGSVICSNAQLQERVALKD 431 (456)
Q Consensus 376 ~~i~~s~Ig~~~~ig~~~~i~~s~i~~~-------------------~~ig~~~~i~~~ii~~~~~I~~~~~i~~ 431 (456)
+.|.+++||++|.||++|.|.+++++++ +.||++|+|++++|+++|.||++++|.+
T Consensus 342 ~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~ 416 (451)
T 1yp2_A 342 CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIIN 416 (451)
T ss_dssp EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECC
T ss_pred eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeC
Confidence 7888999999999999999999998888 9999999999999999999999998864
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.7e-43 Score=351.49 Aligned_cols=343 Identities=17% Similarity=0.237 Sum_probs=239.5
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCc-chHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc-cC----
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-VD---- 75 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gk-pli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-~~---- 75 (456)
+|+|||||||.|+||+|+ |...||+|+|++|+ |||+|+|++|.++|+++++|++++.. +.+.+++.+.+ ..
T Consensus 12 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 88 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKEL-TDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKA--HSLIRHLQRGWDFFRPER 88 (420)
T ss_dssp GEEEEEEECCCCGGGGGG-GSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTC--HHHHHHHHHHSCCCCGGG
T ss_pred ceEEEEEcCCCCCccchh-hcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCCh--HHHHHHHhhhhccccccc
Confidence 478999999999999999 88999999999999 99999999999999999999998642 35555554421 11
Q ss_pred ccceEEEEcc----CC---cChHHHHHHHHhcCC---CCcEEEEcCCcccCCChhHHHHHHHhcCceEEEEEeecccCCC
Q 012817 76 RLHVEVATVP----ED---VGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGL 145 (456)
Q Consensus 76 ~~~i~~~~~~----~~---~gt~~al~~~~~~l~---~~~~lv~~~D~i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~ 145 (456)
...+.+.... ++ .|++++++.+++.+. .+++++++||.+++.++.++++.|++.++++++++.+.+..+
T Consensus 89 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~- 167 (420)
T 3brk_X 89 NESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRME- 167 (420)
T ss_dssp TCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTG-
T ss_pred cCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccc-
Confidence 0123343211 23 799999998877664 367999999998888999999999998899988887654222
Q ss_pred ccCCCCCCcccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHh
Q 012817 146 SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (456)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~ 225 (456)
+..|+++.+|++++ +..+.+++..... .. . ...+.++++|+|+|++++|.++++
T Consensus 168 --------------~~~~g~v~~d~~g~-v~~~~ekp~~~~~----~~--~-----~~~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 168 --------------ATGFGVMHVNEKDE-IIDFIEKPADPPG----IP--G-----NEGFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp --------------GGGSEEEEECTTSB-EEEEEESCSSCCC----BT--T-----BTTEEEEEEEEEEEEHHHHHHHHT
T ss_pred --------------cCcccEEEECCCCc-EEEeEeCCCcccc----cc--c-----cccceEEeeeeEEEeHHHHHHHHH
Confidence 45789999887776 4455432211110 00 0 012567899999999999876665
Q ss_pred cCc----cccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCccee
Q 012817 226 QKD----KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHK 301 (456)
Q Consensus 226 ~~~----~~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (456)
+.. ...++..|+++.+++++-
T Consensus 222 ~~~~~~~~~~~~~~d~l~~li~~g~------------------------------------------------------- 246 (420)
T 3brk_X 222 RDAADPTSSRDFGKDIIPYIVEHGK------------------------------------------------------- 246 (420)
T ss_dssp SSCCC----------CTTHHHHHSC-------------------------------------------------------
T ss_pred HhcccCCccccchHHHHHHHhhhCc-------------------------------------------------------
Confidence 421 123566788888876531
Q ss_pred eEEEEe---------cCcchhhcccCHHHHHHHhHhhhccccccCCC---cccCCCceeCCCCEeCC-----CcEECCCC
Q 012817 302 CCVYIA---------SNSKYCVRLNSIQAFMDINRDVIGEANHLSGY---NFSAQNNIIHPSAELGS-----KTTVGPHC 364 (456)
Q Consensus 302 ~~~yi~---------~~~~~~~~i~~~~~y~~~~~~~l~~~~~~~~~---~~~~~~~~i~~~~~i~~-----~~~i~~~~ 364 (456)
+.+|.. +..+||.+++++++|.++++.++........+ ..+.....++|++.+++ ++.+ .++
T Consensus 247 v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~~~~~~i-~~~ 325 (420)
T 3brk_X 247 AVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSA-VSS 325 (420)
T ss_dssp EEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCCEEECBCSSCBCEE-ESC
T ss_pred EEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCCcEEecccccCCcEe-cCC
Confidence 122221 11569999999999999999988754322211 11223444556666555 4444 577
Q ss_pred EECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEcCeEECCCCEECCCcEecC
Q 012817 365 MLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKD 431 (456)
Q Consensus 365 ~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i~~ 431 (456)
.||++|.| +++.|.+|+||++|.||++|.|.+|+|+++|.||++|.|.+|+||++|.|+++++|.+
T Consensus 326 ~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i~~ 391 (420)
T 3brk_X 326 VVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIVGE 391 (420)
T ss_dssp EECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEESS
T ss_pred EECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCCCEECCCCEEeC
Confidence 78888888 7777777888888888888888888888888888888887788888888888777754
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=4.2e-41 Score=346.39 Aligned_cols=355 Identities=20% Similarity=0.253 Sum_probs=248.1
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc-cCccceEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-VDRLHVEV 81 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-~~~~~i~~ 81 (456)
+.+||||||+|+||+|+ .||||+|++|||||+|+|++|.++|+++++|++++. .+.+++++.+.. .....+.+
T Consensus 13 ~~vvILAaG~GtRm~~~----~pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~--~~~i~~~~~~~~~~~~~~i~~ 86 (501)
T 3st8_A 13 TAVLVLAAGPGTRMRSD----TPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHD--HQRIAPLVGELADTLGRTIDV 86 (501)
T ss_dssp EEEEEEECSCCGGGCCS----SCGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTT--HHHHHHHHHHHHHHHTSCCEE
T ss_pred ceEEEECCcCcccCCCC----CCHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHHHHHHhcCCcEEE
Confidence 56799999999999998 399999999999999999999999999999999866 356777765421 11245788
Q ss_pred EEccCCcChHHHHHHHHhcCCC---CcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCccc
Q 012817 82 ATVPEDVGTAGALRAIAHHLTA---KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (456)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~l~~---~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~ 156 (456)
+.+++++||++|++++++.+.+ ++++++.||. +....+.++++.|++.++++++++.+.+
T Consensus 87 ~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~--------------- 151 (501)
T 3st8_A 87 ALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD--------------- 151 (501)
T ss_dssp EECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS---------------
T ss_pred EEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC---------------
Confidence 8899999999999999998864 3589999993 3445689999999999999999988765
Q ss_pred CCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcC----ccccc
Q 012817 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQK----DKFQS 232 (456)
Q Consensus 157 ~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~----~~~~s 232 (456)
+|..||.+..|+++++ ..+.|+.+ . .+. +...+++|+|+|+|++++|..++.+. ...+.
T Consensus 152 --dp~~yG~i~~~~~g~v-~~ivEk~~----~-~~~---------~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~ 214 (501)
T 3st8_A 152 --DPFGYGRILRTQDHEV-MAIVEQTD----A-TPS---------QREIREVNAGVYAFDIAALRSALSRLSSNNAQQEL 214 (501)
T ss_dssp --CCTTSCEEEECTTCCE-EEEECGGG----C-CHH---------HHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSC
T ss_pred --CchhccccccccceeE-EeeccccC----C-Chh---------hccceeeeceeeeecchhHHHhhhhhccccccccc
Confidence 2778999999998875 44543221 1 011 12467899999999999999887642 22344
Q ss_pred cccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcceeeEEEEecCcch
Q 012817 233 LKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKY 312 (456)
Q Consensus 233 ~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~ 312 (456)
+..|++..+...+...... .......
T Consensus 215 yltd~i~~~~~~g~~v~~~------------------------------------------------------~~~~~~~ 240 (501)
T 3st8_A 215 YLTDVIAILRSDGQTVHAS------------------------------------------------------HVDDSAL 240 (501)
T ss_dssp CTTHHHHHHHHTTCCEEEE------------------------------------------------------ECSSGGG
T ss_pred chhhHHHHHHhcCceEEEE------------------------------------------------------eccchhh
Confidence 5678887776654322111 0011111
Q ss_pred hhcccCHHHHHHHh---------Hhhh------cc-ccccCCCcccCCCc------------------------------
Q 012817 313 CVRLNSIQAFMDIN---------RDVI------GE-ANHLSGYNFSAQNN------------------------------ 346 (456)
Q Consensus 313 ~~~i~~~~~y~~~~---------~~~l------~~-~~~~~~~~~~~~~~------------------------------ 346 (456)
+..+++...+.+.. ..++ +. ...+.....+++++
T Consensus 241 ~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~ 320 (501)
T 3st8_A 241 VAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVA 320 (501)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEE
T ss_pred hcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeecCccccccceEEeeceeecCce
Confidence 11112211111110 0000 00 00000000111111
Q ss_pred ---------------eeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcE
Q 012817 347 ---------------IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCS 411 (456)
Q Consensus 347 ---------------~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~ 411 (456)
.+++.+.+++.+.+++++.|+++|.||.++.+++|+||++|.|++.+++++|+|+++|.||.++.
T Consensus 321 i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i 400 (501)
T 3st8_A 321 VGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSV 400 (501)
T ss_dssp ECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCE
T ss_pred EecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEE
Confidence 12334445555666667777777777777778889999999999999999999999999999998
Q ss_pred EcC--------eEECCCCEECCCcEe-cCeEECCCCEECCCcEEcCC
Q 012817 412 IQG--------SVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 412 i~~--------~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~~ 449 (456)
+.| ++||++|.||.++.| .++.||+++.|++|+.+...
T Consensus 401 ~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~d 447 (501)
T 3st8_A 401 FVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVRED 447 (501)
T ss_dssp EECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSC
T ss_pred EEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECcc
Confidence 854 899999999999976 48999999999999887543
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=4.1e-40 Score=330.22 Aligned_cols=316 Identities=20% Similarity=0.344 Sum_probs=199.8
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~ 82 (456)
|+|||||||.|+||+|+ |.+.||+|+|++|||||+|++++|.++++++++|++++. +.+++.+.. .++.++
T Consensus 1 m~aiIlA~G~g~R~~pl-t~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~-----i~~~~~~~~---~~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPI-THTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK-----NKEYFEKKL---KEISIV 71 (401)
T ss_dssp CEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG-----GHHHHHHHC---TTCEEE
T ss_pred CeEEEEcCcCccccCcc-cCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH-----HHHHhhccC---CcEEEE
Confidence 68999999999999999 889999999999999999999999999999999999754 333333321 135666
Q ss_pred EccC-CcChHHHHHHHHhcCCCCcEEEEcCCcccC--CChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCC
Q 012817 83 TVPE-DVGTAGALRAIAHHLTAKDVLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (456)
Q Consensus 83 ~~~~-~~gt~~al~~~~~~l~~~~~lv~~~D~i~~--~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
..+. +.|++++++.+.+ .++++++.||..+. .+++++++ .+++++++.+.+ +
T Consensus 72 ~~~~~~~g~~~~l~~~~~---~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~--~--------------- 126 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF---NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS--N--------------- 126 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC---SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS--C---------------
T ss_pred eCCCCCCChHHHHHHhcc---CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC--C---------------
Confidence 5555 6788888876654 47799999997654 45666665 355666665543 1
Q ss_pred CCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcCcc--ccc-cccc
Q 012817 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDK--FQS-LKQD 236 (456)
Q Consensus 160 ~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~~~--~~s-~~~d 236 (456)
+..|+++..++++++ ..+.+ |+. ...+.++++|+|+|++++|+.+ ++... ... ...|
T Consensus 127 ~~~~~~v~~~~~g~v-~~~~e-----k~~-------------~~~~~~~~~Giy~~~~~~~~~l-~~~~~~~~~~~~~~~ 186 (401)
T 2ggo_A 127 PKDYGVLVLDNQNNL-SKIIE-----KPE-------------IPPSNLINAGIYKLNSDIFTYL-DKISISERGELELTD 186 (401)
T ss_dssp CSSSCEEEECTTSSE-EEEEC-----SCS-------------SCSCSEEEEEEEEEETHHHHHH-HHSCCCSSSCBCHHH
T ss_pred CcceeEEEECCCCeE-EEEEE-----CCC-------------CCCCcEEEEEEEEEcHHHHHHh-hhcCcCCCCceEHHH
Confidence 445788888877664 44432 210 1135688999999999998754 32210 001 1136
Q ss_pred hhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcceeeEEEEecCcchhhcc
Q 012817 237 VLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRL 316 (456)
Q Consensus 237 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~~~~i 316 (456)
+++.+ ..+ .++..+ ...++|.++
T Consensus 187 ~~~~~-~~g------------------------------------------------------~~v~~~--~~~~~~~dI 209 (401)
T 2ggo_A 187 AINLM-AKD------------------------------------------------------HRVKVI--EYEGYWMDI 209 (401)
T ss_dssp HHHHH-HHH------------------------------------------------------SCEEEE--ECCSCEEEC
T ss_pred HHHHH-HCC------------------------------------------------------CcEEEE--EecceEEcC
Confidence 66655 332 122333 334589999
Q ss_pred cCHHHHHHHhHhhhcccc------ccCCCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEE
Q 012817 317 NSIQAFMDINRDVIGEAN------HLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRI 389 (456)
Q Consensus 317 ~~~~~y~~~~~~~l~~~~------~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~i 389 (456)
+++++|..+++.++.+.. .+.....+.++..+++++.|++++.|++++.||++|.|+++|.|. +++||++|.|
T Consensus 210 ~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~i 289 (401)
T 2ggo_A 210 GKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKI 289 (401)
T ss_dssp CSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEE
T ss_pred CCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEE
Confidence 999999999887765322 111122223344444444444444444445555555555555554 3555555555
Q ss_pred CCCcEEeCeEECCCCEECCCcEEcCeEECCCCEECCCcEe
Q 012817 390 GSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVAL 429 (456)
Q Consensus 390 g~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i 429 (456)
|++|.|.+|+|++++.||+++.+++++||++|.||++++|
T Consensus 290 g~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i 329 (401)
T 2ggo_A 290 GASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLI 329 (401)
T ss_dssp EETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEE
T ss_pred CCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEE
Confidence 5555555555555555555555555555555555555544
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=1.2e-38 Score=325.92 Aligned_cols=329 Identities=19% Similarity=0.243 Sum_probs=235.8
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~ 82 (456)
-+|||||||.|+||+ ...||+|+|++|||||+|++++|.++++++++|++++. .+.+.+++.+ .+.++
T Consensus 12 ~~~vIlAaG~g~R~~----~~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~--~~~i~~~~~~------~i~~v 79 (468)
T 1hm9_A 12 NFAIILAAGKGTRMK----SDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHK--AELVEEVLAG------QTEFV 79 (468)
T ss_dssp EEEEEECCCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTT--HHHHHHSSSS------SSEEE
T ss_pred CcEEEEcCCCCccCC----CCCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCC--HHHHHHHhCC------CcEEE
Confidence 479999999999994 46899999999999999999999999999999999865 2345554432 35666
Q ss_pred EccCCcChHHHHHHHHhcCC--CCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCC
Q 012817 83 TVPEDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTK 158 (456)
Q Consensus 83 ~~~~~~gt~~al~~~~~~l~--~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~ 158 (456)
..+...|++++++.+++.+. .+.+++++||. +...+++++++.|++.++++++++.+..
T Consensus 80 ~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~----------------- 142 (468)
T 1hm9_A 80 TQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD----------------- 142 (468)
T ss_dssp ECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS-----------------
T ss_pred eCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC-----------------
Confidence 66667899999999988775 46799999996 6677899999999988888888776543
Q ss_pred CCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcCcc----ccccc
Q 012817 159 KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDK----FQSLK 234 (456)
Q Consensus 159 ~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~~~----~~s~~ 234 (456)
++..|+++.+|+++++ ..+.+++..... ...+.++++|+|+|+++.|.+++++... ...+.
T Consensus 143 ~~~~~g~v~~d~~g~v-~~~~ek~~~~~~--------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~ 207 (468)
T 1hm9_A 143 NPFGYGRIVRNDNAEV-LRIVEQKDATDF--------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYI 207 (468)
T ss_dssp CCTTSCEEEECTTCCE-EEEECTTTCCTT--------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCT
T ss_pred CCCceeEEEECCCCCE-EEEEECCCCChH--------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEH
Confidence 1556888888877764 444432110000 0125678999999999976556543211 12234
Q ss_pred cchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcceeeEEEEecCcchhh
Q 012817 235 QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCV 314 (456)
Q Consensus 235 ~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~~~ 314 (456)
+|+++.+++.+. ++..| ...++|.
T Consensus 208 ~d~~~~l~~~g~------------------------------------------------------~v~~~--~~~g~~~ 231 (468)
T 1hm9_A 208 TDVIGIFRETGE------------------------------------------------------KVGAY--TLKDFDE 231 (468)
T ss_dssp THHHHHHHHHTC------------------------------------------------------CEEEE--ECSSGGG
T ss_pred HHHHHHHHHCCC------------------------------------------------------EEEEE--EcCChHH
Confidence 788888876442 23344 3456887
Q ss_pred c--ccCHHHHHHHhHhhhcc--------ccc-cCC-CcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeE
Q 012817 315 R--LNSIQAFMDINRDVIGE--------ANH-LSG-YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV 382 (456)
Q Consensus 315 ~--i~~~~~y~~~~~~~l~~--------~~~-~~~-~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~ 382 (456)
+ ++++++|..++..+..+ ... +.+ ..++++.+.|++++.|++++.|++++.||++|.|+++|.|+++.
T Consensus 232 ~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ 311 (468)
T 1hm9_A 232 SLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDST 311 (468)
T ss_dssp GCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCE
T ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccE
Confidence 7 45999998887544221 010 111 22445667777777777777777788888888888888888888
Q ss_pred ECCCCEECCCcEEeCeEECCCCEECCCcEEc-CeEECCCCEECCCcEecCe
Q 012817 383 IGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDC 432 (456)
Q Consensus 383 Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~ 432 (456)
||++|.|+ ++.|.+++|+++|.||+++.|. +++|++++.||+++.+.++
T Consensus 312 ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~ 361 (468)
T 1hm9_A 312 IGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGS 361 (468)
T ss_dssp ECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESC
T ss_pred EeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeee
Confidence 88888888 8888888888888888888886 7777777777666555433
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=7e-38 Score=319.57 Aligned_cols=199 Identities=18% Similarity=0.265 Sum_probs=141.9
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|+|.|||||||.|+||. ...||+|+|++|||||+|++++|.++++++++|++++. .+.+.+++.+ .++.
T Consensus 7 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~--~~~i~~~~~~-----~~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMY----SDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHG--GELLKKTLAD-----PSLN 75 (459)
T ss_dssp CCEEEEEEECCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSC--HHHHHHHC----------C
T ss_pred CcceEEEECCCCCccCC----CCCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhcc-----CCcE
Confidence 57899999999999995 35899999999999999999999999999999999865 2456655543 2355
Q ss_pred EEEccCCcChHHHHHHHHhcCCC-CcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccC
Q 012817 81 VATVPEDVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~~-~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (456)
++..+...|++++++.+++.+.+ +.+++++||. +...+++++++.|.+ .+++++..+.. +
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~--~------------- 138 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLD--N------------- 138 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--C-------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecC--C-------------
Confidence 66566678999999999998864 6799999995 677789999998875 44555555432 2
Q ss_pred CCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcCc----ccccc
Q 012817 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKD----KFQSL 233 (456)
Q Consensus 158 ~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~~----~~~s~ 233 (456)
+..|+++..| +++ +..+.++++.... ...+.++++|+|+|+++.|..+++... ....+
T Consensus 139 --~~~~g~v~~~-~g~-v~~~~ek~~~~~~--------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 200 (459)
T 4fce_A 139 --PSGYGRIVRE-NGD-VVGIVEHKDASDA--------------QREINEINTGILVANGRDLKRWLSLLDNNNAQGEFY 200 (459)
T ss_dssp --CTTSCEEEEE-TTE-EEEEECGGGCCTT--------------GGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCC
T ss_pred --CCcccEEEeC-CCc-EEEEEECCCCChH--------------HhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEE
Confidence 5568888887 454 4555432211100 113567899999999998876665321 12223
Q ss_pred ccchhHHHhHhc
Q 012817 234 KQDVLPYLVRSQ 245 (456)
Q Consensus 234 ~~d~l~~l~~~~ 245 (456)
..|+++.+.+.+
T Consensus 201 ~~d~~~~~~~~g 212 (459)
T 4fce_A 201 ITDIIALAHADG 212 (459)
T ss_dssp TTHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
Confidence 467777776543
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=1.5e-37 Score=316.89 Aligned_cols=312 Identities=14% Similarity=0.213 Sum_probs=197.8
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.|||||||.|+||. ...||+|+|++|||||+|++++|.++++++++|++++.. +.+.+++.+. ++.
T Consensus 4 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~--~~i~~~~~~~-----~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMY----SDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGG--DLMRTHLANE-----QVN 72 (456)
T ss_dssp CCEEEEEECCCCCGGGC----SSSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTH--HHHHHHTTTC-----CCE
T ss_pred CcceEEEECCCCCcccC----CCCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCH--HHHHHHhhcC-----CcE
Confidence 46789999999999994 468999999999999999999999999999999998642 3555555332 356
Q ss_pred EEEccCCcChHHHHHHHHhcCC-CCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccC
Q 012817 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~-~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (456)
++..+...|++++++.+++.+. .+.+++++||. +...+++++++.|.+ ++++++..+.. +
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~--~------------- 135 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD--N------------- 135 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--S-------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC--C-------------
Confidence 6666667899999999998885 57799999995 667789999998876 56666655433 1
Q ss_pred CCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcCcc----cccc
Q 012817 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDK----FQSL 233 (456)
Q Consensus 158 ~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~~~----~~s~ 233 (456)
+..|+.+..| +++ +..+.++.+. ... ...+.++++|+|+|+++.|.+.+++... ....
T Consensus 136 --~~~~g~v~~~-~g~-v~~~~ek~~~------~~~--------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 197 (456)
T 2v0h_A 136 --PTGYGRIIRE-NGN-VVAIVEQKDA------NAE--------QLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYY 197 (456)
T ss_dssp --CTTSCEEEEE-TTE-EEEEECTTTC------CHH--------HHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCC
T ss_pred --CCccceEEEc-CCc-EEEEEECCCC------Chh--------HhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEE
Confidence 4557888777 554 4555432111 000 0024578999999999977666543211 1123
Q ss_pred ccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcceeeEEEEecCcchh
Q 012817 234 KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYC 313 (456)
Q Consensus 234 ~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~~ 313 (456)
..|+++.+.+.+. ++..|..+....|
T Consensus 198 ~~d~~~~~~~~g~------------------------------------------------------~v~~~~~~~~~~~ 223 (456)
T 2v0h_A 198 LTDLIALANQDNC------------------------------------------------------QVVAVQATDVMEV 223 (456)
T ss_dssp GGGHHHHHHHTTC------------------------------------------------------CEEEEECSCTGGG
T ss_pred HHHHHHHHHHcCC------------------------------------------------------EEEEEEeCCcceE
Confidence 4677777665331 2333422212234
Q ss_pred hcccCHHHHHHHhHhhhcc--------ccc-cCC-CcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEE
Q 012817 314 VRLNSIQAFMDINRDVIGE--------ANH-LSG-YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVI 383 (456)
Q Consensus 314 ~~i~~~~~y~~~~~~~l~~--------~~~-~~~-~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~I 383 (456)
.+++++++|..+++.+..+ ... +++ ..++++...+++++.|++++.|++++.||++|.|+++|.|.+++|
T Consensus 224 ~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~i 303 (456)
T 2v0h_A 224 EGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVI 303 (456)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEEEEEEECTTCEECTTCEEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEcCCcEECCCCEECCCCEEEeEEE
Confidence 5888999998887643221 111 111 122334445555555555555555555555555555555555555
Q ss_pred CCCCEECCCcEEeCeEECCCCEECCCcEE
Q 012817 384 GRHCRIGSNVKVVNSVVMNHVTIGDGCSI 412 (456)
Q Consensus 384 g~~~~ig~~~~i~~s~i~~~~~ig~~~~i 412 (456)
|++|.|++++.|.+++|+++|.||+++.|
T Consensus 304 g~~~~I~~~~~i~~~~ig~~~~I~~~~~i 332 (456)
T 2v0h_A 304 GNDVEIKPYSVLEDSIVGEKAAIGPFSRL 332 (456)
T ss_dssp CTTCEECSSCEEEEEEECTTCEECSSEEE
T ss_pred eCCCEEcCCeEEccCcCCCCcEECCccEE
Confidence 55555555555544444444444443333
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.97 E-value=4.1e-30 Score=245.01 Aligned_cols=241 Identities=13% Similarity=0.221 Sum_probs=178.5
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc-c-----
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-V----- 74 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-~----- 74 (456)
|.|+|||||||.|+||+|+ |..+||+|+|++|||||+|+++++.++|+++++|++++.. +.+.+++.+.+ +
T Consensus 1 M~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~--~~i~~~~~~~~~l~~~l~ 77 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPI-TKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNK--RSLEDYFDTSYEIEHQIQ 77 (281)
T ss_dssp CCCEEEEECCSCCGGGTTG-GGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTH--HHHHHHTSCCC-------
T ss_pred CceEEEEECCcCCcccCcc-ccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCH--HHHHHHHhcchhhhhhhh
Confidence 8899999999999999999 9999999999999999999999999999999999998553 45666654321 0
Q ss_pred ---------------CccceEEEEccCCcChHHHHHHHHhcCCCCcEEEEcCCcccCCC-----hhHHHHHHHhcCceEE
Q 012817 75 ---------------DRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-----PGAVTAAHRRHDAVVT 134 (456)
Q Consensus 75 ---------------~~~~i~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~i~~~~-----l~~~l~~~~~~~a~~t 134 (456)
....+.++.++...|++++++.+++.+.+++|+|++||.+++.+ +.++++.|.+.++ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~ 156 (281)
T 3juk_A 78 GTNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SI 156 (281)
T ss_dssp -CCHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CE
T ss_pred cccchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CE
Confidence 01234555566679999999999988877789999999888887 9999999988877 56
Q ss_pred EEEeecccCCCccCCCCCCcccCCCCCcccEEEecC--CC-cEEEEeecccccccccccchHHHhhcceeEEecCCccce
Q 012817 135 AMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (456)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~--~~-~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~g 211 (456)
+.+...+..+ +..|+++..|+ ++ ..+..+.+++..+ ...++++++|
T Consensus 157 v~~~~~~~~~---------------~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~----------------~~~~~~~~~G 205 (281)
T 3juk_A 157 VAIEEVALEE---------------VSKYGVIRGEWLEEGVYEIKDMVEKPNQE----------------DAPSNLAVIG 205 (281)
T ss_dssp EEEEECCTTT---------------GGGSEEEEEEEEETTEEEEEEEEESCCTT----------------TCSCSEEEEE
T ss_pred EEEEEechhh---------------cccCCEEEeccCCCCceEEeEEEECcCCC----------------CCCcceeEEE
Confidence 6665554222 56799999886 55 1355555322100 1135678999
Q ss_pred EEeechHHHHHHHhcCc--cccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCC
Q 012817 212 MYAFNRSVLQEVLDQKD--KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALG 289 (456)
Q Consensus 212 iYi~~~~vl~~~~~~~~--~~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (456)
+|+|++++|..+..... ...-...|+++.+++.+
T Consensus 206 iYi~~~~~l~~l~~~~~~~~~e~~l~d~i~~l~~~~-------------------------------------------- 241 (281)
T 3juk_A 206 RYILTPDIFEILSETKPGKNNEIQITDALRTQAKRK-------------------------------------------- 241 (281)
T ss_dssp EEEECTTHHHHHHTCCCCGGGSCCHHHHHHHHHHHS--------------------------------------------
T ss_pred EEEECHHHHHHHHhcCCCCCCceeHHHHHHHHHhcC--------------------------------------------
Confidence 99999999965432111 01111268888877542
Q ss_pred CCCCCCCCcceeeEEEEecCcchhhcccCHHHHHHHhHhhhccc
Q 012817 290 PNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (456)
Q Consensus 290 ~~~~~~~~~~~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~l~~~ 333 (456)
++.+| ...++|.+++++++|+++++.++...
T Consensus 242 -----------~v~~~--~~~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 242 -----------RIIAY--QFKGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp -----------CCEEE--ECCSEEEETTSHHHHHHHHHHHHHHH
T ss_pred -----------CEEEE--EeCCeEEcCCCHHHHHHHHHHHHhch
Confidence 22344 34679999999999999999887643
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.96 E-value=1e-27 Score=226.78 Aligned_cols=234 Identities=15% Similarity=0.240 Sum_probs=174.4
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
+|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++... ..+.+++.+.......+.+
T Consensus 24 ~m~aiIlAaG~g~Rl~~l-t~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~-~~~~~~~~~~~~~~~~i~~ 101 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPI-TKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHM-GDVVSFLGSGQEFGVSFTY 101 (269)
T ss_dssp CEEEEEECCSCCGGGTTT-TSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTH-HHHHHHHTTSGGGTCEEEE
T ss_pred CcEEEEECCCCccccccc-cCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhH-HHHHHHHhhccccCceEEE
Confidence 489999999999999999 89999999999999999999999999999999999985321 2445555432111223555
Q ss_pred EEccCCcChHHHHHHHHhcCCCCcEEEEcCCcccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCC
Q 012817 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (456)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
..++...|++++++.+.+.+.++++++++||.++..++.++++.|.+.++++++++.+.+. +.
T Consensus 102 ~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-----------------~~ 164 (269)
T 4ecm_A 102 RVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDD-----------------PE 164 (269)
T ss_dssp EECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECSC-----------------GG
T ss_pred eeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECCC-----------------CC
Confidence 5556678999999999888766789999999888899999999999988898888876541 55
Q ss_pred cccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhcCc---cccccccchh
Q 012817 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKD---KFQSLKQDVL 238 (456)
Q Consensus 162 ~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~~~---~~~s~~~d~l 238 (456)
.|+++..|+ ++ +..+.+ |+. ...+.++++|+|+|++++|..+ .+.. ...-...|++
T Consensus 165 ~~g~v~~d~-g~-v~~~~e-----kp~-------------~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~ge~~l~d~l 223 (269)
T 4ecm_A 165 RFGVANIQN-RK-IIEIEE-----KPK-------------EPKSSYAVTGIYLYDSKVFSYI-KELKPSARGELEITDIN 223 (269)
T ss_dssp GSEEEEEET-TE-EEEEEE-----SCS-------------SCSCSEEEEEEEEECTTHHHHH-TSCCBCTTSCBCHHHHH
T ss_pred CceEEEEcC-CE-EEEEEE-----CCC-------------CCCCcEEEEEEEEECHHHHHhh-hhcCCCCCCeeeHHHHH
Confidence 789988884 54 455543 210 1135678999999999998644 3221 1111235777
Q ss_pred HHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCcceeeEEEEecCcchhhcccC
Q 012817 239 PYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNS 318 (456)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~~~~i~~ 318 (456)
+.+.+.+ ++.+| ...++|.++++
T Consensus 224 ~~l~~~g-------------------------------------------------------~v~~~--~~~~~~~dIgt 246 (269)
T 4ecm_A 224 NWYLKRG-------------------------------------------------------VLTYN--EMSGWWTDAGT 246 (269)
T ss_dssp HHHHHTT-------------------------------------------------------CEEEE--ECCSCEEECSS
T ss_pred HHHHHcC-------------------------------------------------------CEEEE--EeCCEEEeCCC
Confidence 7766432 12233 35679999999
Q ss_pred HHHHHHHhHhhhcc
Q 012817 319 IQAFMDINRDVIGE 332 (456)
Q Consensus 319 ~~~y~~~~~~~l~~ 332 (456)
+++|..+++.++..
T Consensus 247 ~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 247 HVSLQRANALARDI 260 (269)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988654
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.95 E-value=7.1e-27 Score=219.83 Aligned_cols=228 Identities=18% Similarity=0.323 Sum_probs=160.1
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhcc--Cccc
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV--DRLH 78 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~--~~~~ 78 (456)
|+|+|||||||.|+||+|+ |...||+|+|++|||||+|+++++.++|+++++|++++.. +.+.+++.+... ..+.
T Consensus 1 m~~~avIlAaG~gtRl~~l-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 77 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEE-TIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKG--YVIKEYFANYFLHMSDVT 77 (259)
T ss_dssp CCCEEEEEECSCC---------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTH--HHHHHHHHTHHHHHSCEE
T ss_pred CCcEEEEECCCCcccCCCc-cCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCH--HHHHHHHhhccccccccc
Confidence 8899999999999999999 8999999999999999999999999999999999997553 355555543210 0111
Q ss_pred -------------------eEEEEccCCcChHHHHHHHHhcC-CCCcEEEEcCCcccCCChhHHHHHHHhcCceEEEEEe
Q 012817 79 -------------------VEVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMIC 138 (456)
Q Consensus 79 -------------------i~~~~~~~~~gt~~al~~~~~~l-~~~~~lv~~~D~i~~~~l~~~l~~~~~~~a~~t~~~~ 138 (456)
+.+..+....|++++++.+.+.+ .++++++++||.+++.++.++++.|.+.++.+++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 78 FHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp EEGGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 11222334689999999998888 3567999999998899999999999888887766432
Q ss_pred ecccCCCccCCCCCCcccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechH
Q 012817 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (456)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~ 218 (456)
. .+..|+++.+| +++ +..+.+ |+.. .+.++++|+|+|+++
T Consensus 158 ~-------------------~~~~~g~v~~~-~g~-v~~~~e-----kp~~--------------~~~~~~~Giy~~~~~ 197 (259)
T 1tzf_A 158 F-------------------PPGRFGALDIQ-AGQ-VRSFQE-----KPKG--------------DGAMINGGFFVLNPS 197 (259)
T ss_dssp C-------------------CCCCSEEEEEE-TTE-EEEEEE-----SCSC--------------CSCCEECCCEEECGG
T ss_pred c-------------------CCCCccEEEEc-CCE-EEEEEe-----cCCC--------------CCceEEEEEEEeCHH
Confidence 2 14568888888 554 455543 3210 145789999999999
Q ss_pred HHHHHHhcCccccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCCCCCCCCCCc
Q 012817 219 VLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRR 298 (456)
Q Consensus 219 vl~~~~~~~~~~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (456)
+|..+ .+. ..++..|+++.+++++
T Consensus 198 ~l~~l-~~~--~~~~~~~~i~~~~~~~----------------------------------------------------- 221 (259)
T 1tzf_A 198 VIDLI-DND--ATTWEQEPLMTLAQQG----------------------------------------------------- 221 (259)
T ss_dssp GGGGC-CST--TCCTTTHHHHHHHHTT-----------------------------------------------------
T ss_pred HHHhh-ccc--ccccHHHHHHHHHHcC-----------------------------------------------------
Confidence 88533 221 1245577887765432
Q ss_pred ceeeEEEEecCcchhhcccCHHHHHHHhHhhhc
Q 012817 299 THKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (456)
Q Consensus 299 ~~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~l~ 331 (456)
++..| ...++|.+++++++|..+++.+..
T Consensus 222 --~v~~~--~~~~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 222 --ELMAF--EHPGFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp --CEEEE--EECSCEEECCSHHHHHHHHHHHHT
T ss_pred --CEEEE--EeCcEEEeCCCHHHHHHHHHHHhc
Confidence 12334 335699999999999999987754
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.95 E-value=6.1e-27 Score=224.74 Aligned_cols=187 Identities=18% Similarity=0.220 Sum_probs=128.5
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc--------
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-------- 73 (456)
.|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++. .+.+.+++.+.+
T Consensus 14 ~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPA-TKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRG--KSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCEEEEEECCCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTT--CHHHHHHTSCCHHHHHHHHT
T ss_pred ccEEEEECCCCccccCcc-ccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHhhhhhhhhhhhh
Confidence 589999999999999999 899999999999999999999999999999999999854 235555543210
Q ss_pred ------------cCccceEEEEccCCcChHHHHHHHHhcCCCCcEEEEcCCcccC---CChhHHHHHHHhcCceEEEEEe
Q 012817 74 ------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD---VPPGAVTAAHRRHDAVVTAMIC 138 (456)
Q Consensus 74 ------------~~~~~i~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~i~~---~~l~~~l~~~~~~~a~~t~~~~ 138 (456)
.....+.++.++...|++++++.+.+.+.++++++++||.+++ .++.++++.|++.++ .++.+.
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~ 169 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAE 169 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEE
Confidence 0123466666666789999999998887667899999997665 679999999988766 455554
Q ss_pred ecccCCCccCCCCCCcccCCCCCcccEEEecC--CC-cEEEEeecccccccccccchHHHhhcceeEEecCCccceEEee
Q 012817 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAF 215 (456)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~--~~-~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~ 215 (456)
+.+.. ++..|+++..|+ ++ ..+..+.+ |+.. -...+.++++|+|+|
T Consensus 170 ~~~~~---------------~~~~yg~v~~~~~~~~~~~v~~~~e-----kp~~-----------~~~~~~~~~~Giyi~ 218 (297)
T 2ux8_A 170 EVPDD---------------QTHRYGIITPGTQDGVLTEVKGLVE-----KPAP-----------GTAPSNLSVIGRYIL 218 (297)
T ss_dssp --------------------------CCCCCCBCSSEEEC------------------------------CCCEEEEEEE
T ss_pred ecCcc---------------cCCCCCeEEecccCCCceeEEEEEE-----CCCC-----------CCCCccEEEEEEEEE
Confidence 43211 145688776653 33 12333332 2100 022457899999999
Q ss_pred chHHHHHH
Q 012817 216 NRSVLQEV 223 (456)
Q Consensus 216 ~~~vl~~~ 223 (456)
++++|..+
T Consensus 219 ~~~~l~~l 226 (297)
T 2ux8_A 219 QPEVMRIL 226 (297)
T ss_dssp CTHHHHHH
T ss_pred CHHHHHHH
Confidence 99988654
No 12
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.94 E-value=3.8e-26 Score=219.46 Aligned_cols=252 Identities=15% Similarity=0.117 Sum_probs=173.2
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCccccccc--CCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccc
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPV--ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi--~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~ 78 (456)
|+|.+||||||.|+||+| ||+|+|+ +|+|||+|+++++.++|+++++|++++.. .+.+.+++.+......+
T Consensus 4 m~~~~vIlAaG~g~R~~~------~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~-~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS------LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSF-EKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCEEEEECTTCBCTTSS------BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGG-HHHHHHHTHHHHTTTSC
T ss_pred CceEEEEECCCCcccCCC------CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchH-HHHHHHHHHHHhccCCc
Confidence 678999999999999964 6999999 59999999999999999999999998552 24666666554333345
Q ss_pred eEEEEcc---------------CCcChHHHHHHHHhcCCCCcEEEEcCCcccCCC-hhHHHHHHHh---cCceEEEEEee
Q 012817 79 VEVATVP---------------EDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR---HDAVVTAMICS 139 (456)
Q Consensus 79 i~~~~~~---------------~~~gt~~al~~~~~~l~~~~~lv~~~D~i~~~~-l~~~l~~~~~---~~a~~t~~~~~ 139 (456)
+.++.++ .+.||+++++.+.+.+ +++|+|++||.+++.+ +.+++++|.+ .++++++++.+
T Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-~~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 77 VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-REPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-CSCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EEEEecccccccccccccccccccCCcHHHHHHHHHhc-CCCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 6777665 5689999999999988 5789999999888775 9999999986 56888888877
Q ss_pred cccCCC-ccCCCCCCcccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcc--eeEEecCCccceEEeec
Q 012817 140 VPVSGL-SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVG--QMDIRADLMDAHMYAFN 216 (456)
Q Consensus 140 ~~~~~~-~~~~~~~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~giYi~~ 216 (456)
.. +| +..+ ...+|++.+|++++ +..+.|+++....-.- .......+ .....++++++|+|+|+
T Consensus 156 ~~--~~~~~~g----------~~~~G~v~~d~~g~-v~~i~Ekp~~~~~~~~-~~~~~~~g~~~~~~~~~~i~~GiY~f~ 221 (303)
T 3pnn_A 156 VG--NTLSESG----------GVSRGVCQVDEKHL-LTGVVERTGIERTDGT-ISFRDETGKICTLAEDAPVSMNMWGFT 221 (303)
T ss_dssp GG--GSCBTTB----------CEEEEEEEECTTSB-EEEEEEEEEEEEETTE-EEEECTTSCEEEECTTCEEEEEEEEEC
T ss_pred CC--CccCccC----------ceeeeeEeeCCCCc-EEEEEECCCCcccccc-ccccccccccccCCCCCEEEEEEEEEC
Confidence 64 22 1100 12246888988776 5566543321100000 00000000 00014678999999999
Q ss_pred hHHHHHHHh----------cCccccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccc
Q 012817 217 RSVLQEVLD----------QKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELY 286 (456)
Q Consensus 217 ~~vl~~~~~----------~~~~~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (456)
+++|..+.. .+...+.+.+|+++.+++++.
T Consensus 222 ~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~---------------------------------------- 261 (303)
T 3pnn_A 222 PDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGR---------------------------------------- 261 (303)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTS----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCC----------------------------------------
Confidence 999876532 111112234677777765431
Q ss_pred cCCCCCCCCCCcceeeEEEEecCcchhhcccCHHHHHHHhHhh
Q 012817 287 ALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDV 329 (456)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~ 329 (456)
.++.+| +..++|.+++++++|.+++..+
T Consensus 262 -------------~~v~~~--~~~g~w~dIgt~~dl~~a~~~l 289 (303)
T 3pnn_A 262 -------------ASVEVL--DTTARWFGVTYSDDRPGVVAKL 289 (303)
T ss_dssp -------------CEEEEE--ECSCCCBCCSSGGGHHHHHHHH
T ss_pred -------------CcEEEE--EeCCceECCCCHHHHHHHHHHH
Confidence 134455 4568999999999999888765
No 13
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.94 E-value=4.4e-26 Score=219.35 Aligned_cols=236 Identities=12% Similarity=0.212 Sum_probs=167.2
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc--------
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-------- 73 (456)
.|++||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++. .+.+.+++.+.+
T Consensus 8 ~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~ 84 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPA-TKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSS--KNSIENHFDTSFELEAMLEK 84 (302)
T ss_dssp CCEEEEECCSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG--GHHHHHHHSCCHHHHHHHC-
T ss_pred ccEEEEECCcCcccCCcc-ccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCC--HHHHHHHHhcchhhhhhhhh
Confidence 379999999999999999 999999999999999999999999999999999999864 235555553211
Q ss_pred --------------cCccceEEEEccCCcChHHHHHHHHhcCCCCcEEEEcCCcccC-----C---ChhHHHHHHHhcCc
Q 012817 74 --------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD-----V---PPGAVTAAHRRHDA 131 (456)
Q Consensus 74 --------------~~~~~i~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~i~~-----~---~l~~~l~~~~~~~a 131 (456)
.....+.++.++...|++++++.+.+.+.++++++++||++++ . ++.++++.|++.++
T Consensus 85 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 85 RVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp ---CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred ccchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 0122345555666799999999998887667899999997665 3 79999999988776
Q ss_pred eEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEec----CCCc--EEEEeecccccccccccchHHHhhcceeEEec
Q 012817 132 VVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTKQ--FLLHIATGAELEKDTRIRKSILRAVGQMDIRA 205 (456)
Q Consensus 132 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d----~~~~--~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 205 (456)
+++++.+.. .+..|+++..+ +++. .+..+.+++..+ ...+
T Consensus 165 -~~i~~~~~~-----------------~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~----------------~~~~ 210 (302)
T 2e3d_A 165 -SQIMVEPVA-----------------DVTAYGVVDCKGVELAPGESVPMVGVVEKPKAD----------------VAPS 210 (302)
T ss_dssp -EEEEEEECS-----------------CGGGSEEEECTTCCCCTTCEEEECEEEESCCTT----------------TCSC
T ss_pred -cEEEEEEcc-----------------CCCCccEEEecccccCCCCceeEEEEEECCCCC----------------cccc
Confidence 666655432 14578988764 3441 344444321100 1135
Q ss_pred CCccceEEeechHHHHHHHhcCcc---ccccccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcc
Q 012817 206 DLMDAHMYAFNRSVLQEVLDQKDK---FQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSF 282 (456)
Q Consensus 206 ~~~~~giYi~~~~vl~~~~~~~~~---~~s~~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (456)
.++++|+|+|++++|..+ .+... ..-...|+++.+++.+
T Consensus 211 ~~~~~Giyi~~~~~l~~l-~~~~~~~~~~~~l~d~i~~l~~~~------------------------------------- 252 (302)
T 2e3d_A 211 NLAIVGRYVLSADIWPLL-AKTPPGAGDEIQLTDAIDMLIEKE------------------------------------- 252 (302)
T ss_dssp SEEEEEEEEECTTHHHHH-TCCCC----CCCHHHHHHHHHHHS-------------------------------------
T ss_pred ceEEEEEEEECHHHHHHH-HhhCCCCCCceehHHHHHHHHHhC-------------------------------------
Confidence 678999999999988644 33110 0112256666665432
Q ss_pred cccccCCCCCCCCCCcceeeEEEEecCcchhhcccCHHHHHHHhHhhhcc
Q 012817 283 HELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (456)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~l~~ 332 (456)
++.+| ...++|.+++++++|+++++.++.+
T Consensus 253 ------------------~v~~~--~~~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 253 ------------------TVEAY--HMKGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp ------------------CEEEE--ECCSCEEECSSHHHHHHHHHHHHHH
T ss_pred ------------------CEEEE--EeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 22344 4457999999999999999776543
No 14
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.94 E-value=2.6e-26 Score=222.72 Aligned_cols=240 Identities=16% Similarity=0.194 Sum_probs=168.2
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhc--------
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~-------- 73 (456)
.|++||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++.. +.+.+++.+.+
T Consensus 12 ~~~aVIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~--~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 12 VKTVVVPAAGLGTRFLPA-TKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNK--AGVLAHFERSSELEETLME 88 (323)
T ss_dssp CCEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTC--HHHHHTTSCCHHHHHHHHH
T ss_pred ceEEEEECCCCccccCcc-ccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcH--HHHHHHHhccchhhhhhhc
Confidence 489999999999999999 9999999999999999999999999999999999998642 34554443210
Q ss_pred -------------cCccceEEEEccCCcChHHHHHHHHhcCCCCc--EEEEcCCcccC--CChhHHHHHHHhcCceEEEE
Q 012817 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKD--VLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAM 136 (456)
Q Consensus 74 -------------~~~~~i~~~~~~~~~gt~~al~~~~~~l~~~~--~lv~~~D~i~~--~~l~~~l~~~~~~~a~~t~~ 136 (456)
.....+.++.++...|++++++.+.+.+.+++ |++++||.+++ .++..+++.|.+.++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~ 167 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLC 167 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEE
Confidence 00123555656667899999999988886555 99999997665 679999999988766 4555
Q ss_pred EeecccCCCccCCCCCCcccCCCCCcccEEEec----CCC-cEEEEeecccccccccccchHHHhhcceeEEecCCccce
Q 012817 137 ICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (456)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d----~~~-~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~g 211 (456)
+...+..+ +..|+++.+| +++ ..+..+.+++..+ ...+.++++|
T Consensus 168 ~~~~~~~~---------------~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~----------------~~~~~~~~~G 216 (323)
T 2pa4_A 168 AVEVSEAD---------------VSKYGIFEIEADTKDSDVKKVKGMVEKPAIE----------------DAPSRLAATG 216 (323)
T ss_dssp EEECCGGG---------------GGGSEEEEEEECCSSTTEEEEEEEEESCCTT----------------TCSCSEEEEE
T ss_pred EEEecccc---------------cCCccEEEeCCcccCCCceeEEEEEECCCCc----------------cccccEEEEE
Confidence 54443111 4578888876 443 2455555322100 1134678899
Q ss_pred EEeechHHHHHHHhcCccc-ccc-ccchhHHHhHhccccccccCCCCCCccccccCCCcchhhhhccCCCCcccccccCC
Q 012817 212 MYAFNRSVLQEVLDQKDKF-QSL-KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALG 289 (456)
Q Consensus 212 iYi~~~~vl~~~~~~~~~~-~s~-~~d~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (456)
+|+|++++|..+.....+. ..+ ..|+++.+++.+
T Consensus 217 iY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~~~g-------------------------------------------- 252 (323)
T 2pa4_A 217 RYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEG-------------------------------------------- 252 (323)
T ss_dssp EEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHHHTT--------------------------------------------
T ss_pred EEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHHHcC--------------------------------------------
Confidence 9999999887553321110 111 257777775532
Q ss_pred CCCCCCCCcceeeEEEEecCcchhhcccCHHHHHHHhHhhhcc
Q 012817 290 PNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (456)
Q Consensus 290 ~~~~~~~~~~~~~~~yi~~~~~~~~~i~~~~~y~~~~~~~l~~ 332 (456)
.++.+| ...++|.+++++++|..+++.++..
T Consensus 253 ----------~~v~~~--~~~g~w~DIgt~~dl~~a~~~~~~~ 283 (323)
T 2pa4_A 253 ----------HPVHIV--IHQGKRHDLGNPGGYIPACVDFGLS 283 (323)
T ss_dssp ----------CCEEEE--ECCSEEEECSSHHHHHHHHHHHHHT
T ss_pred ----------CCEEEE--EeCCeEEeCCCHHHHHHHHHHHhhc
Confidence 123444 3457999999999999999876543
No 15
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.94 E-value=1.8e-25 Score=213.59 Aligned_cols=185 Identities=20% Similarity=0.332 Sum_probs=140.6
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|+|++||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|++...+ .+.+.+++.+.......+.
T Consensus 1 M~~~aIILAgG~gtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~ 78 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPA-TLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQD-TPRFQQLLGDGSNWGLDLQ 78 (293)
T ss_dssp -CEEEEEECCCCCTTTTTH-HHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEE
T ss_pred CCceEEEECCCCCCcCccc-cCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEecccc-HHHHHHHHhcccccCceEE
Confidence 8899999999999999999 8899999999999999999999999999999998885332 2356666654211123355
Q ss_pred EEEccCCcChHHHHHHHHhcCCCCcEEEEcCCc-ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCC
Q 012817 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~-i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
+..++.+.|++++++.+.+.+.+++++++.||. +.+.++.++++.|.+.+..++++..++. +
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--d--------------- 141 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVL--D--------------- 141 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECS--C---------------
T ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECC--C---------------
Confidence 565666789999999998887667788888995 4467899999999877677777665543 2
Q ss_pred CCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHH
Q 012817 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (456)
Q Consensus 160 ~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~ 223 (456)
|..|+++.+|++++++ .+.+ |+. ...++++++|+|+|++++|..+
T Consensus 142 p~~~g~v~~d~~g~v~-~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 186 (293)
T 1fxo_A 142 PERYGVVEFDQGGKAI-SLEE-----KPL-------------EPKSNYAVTGLYFYDQQVVDIA 186 (293)
T ss_dssp GGGSEEEEECTTSCEE-EEEE-----SCS-------------SCSSSEEEEEEEEECTTHHHHH
T ss_pred cccCcEEEECCCCcEE-EEEE-----CCC-------------CCCCCeEEEEEEEEcHHHHHHH
Confidence 5578999999877643 4432 210 1135678999999999998755
No 16
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.94 E-value=1.6e-25 Score=209.58 Aligned_cols=195 Identities=13% Similarity=0.154 Sum_probs=138.5
Q ss_pred EEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHH-CCCCEEEEEecCchh-hHHHHhhhhhhccCccceEEE
Q 012817 5 VVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADA-ALRVGGWISAAYVDRLHVEVA 82 (456)
Q Consensus 5 aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~-~gi~~v~iv~~~~~~-~~~i~~~~~~~~~~~~~i~~~ 82 (456)
+||||||.|+||+|+ |...||||+|++|||||+|+|+++.+ +|+++++|++++... .+.+++.+.+...... ..+.
T Consensus 2 ~iIlAaG~GtRl~pl-t~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (255)
T 4evw_A 2 IVIPMAGMSSRFFKA-GYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTAVFVREKATQLGIKQF-YIAE 79 (255)
T ss_dssp EEEECCSCCHHHHHT-TCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTTHHHHHHHHHHHHTCSSE-EEEE
T ss_pred EEEEcCCCCcccccC-CCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhhhHHHHHHHHHHcCCCCc-eEEE
Confidence 799999999999999 89999999999999999999999999 799999999986531 1233333332211111 2344
Q ss_pred EccCCcChHHHHHHHHhcC------CCCcEEEEcCCccc-CCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcc
Q 012817 83 TVPEDVGTAGALRAIAHHL------TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKD 155 (456)
Q Consensus 83 ~~~~~~gt~~al~~~~~~l------~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~ 155 (456)
.++...||+++++.+.+.+ .+++++|++||.++ +.++.++ ..+++.+++++..+ +
T Consensus 80 ~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~--~----------- 141 (255)
T 4evw_A 80 LHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG--G----------- 141 (255)
T ss_dssp ESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--S-----------
T ss_pred eCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--C-----------
Confidence 4666799999999998877 35679999999777 5566653 24566778777653 1
Q ss_pred cCCCCCcccEEEecCCC--cEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechH-HHHH----HHhcCc
Q 012817 156 KTKKPGRYNIIGMDPTK--QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS-VLQE----VLDQKD 228 (456)
Q Consensus 156 ~~~~~~~~~iv~~d~~~--~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~-vl~~----~~~~~~ 228 (456)
+ .||++..|+++ + +..+.| |+. .++++++|+|+|++. .|.. ++.+..
T Consensus 142 ----p-~yG~v~~d~~g~~~-V~~i~E-----K~~---------------~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~ 195 (255)
T 4evw_A 142 ----D-NWSFAKPEHAGSTK-VIQTAE-----KNP---------------ISDLCSTGLYHFNRKEDYLEAYREYVARPS 195 (255)
T ss_dssp ----S-CSCEEEESSTTCCB-EEEEES-----SSC---------------SSSEEEEEEEEESCHHHHHHHHHHHHTSCG
T ss_pred ----C-ceeEEEECCCCCeE-EEEEEe-----ccC---------------ccCcEEEeEEEECcHHHHHHHHHHHHhccc
Confidence 3 79999999876 5 555553 311 357899999999985 3322 222211
Q ss_pred ----cccccccchhHHHhHhc
Q 012817 229 ----KFQSLKQDVLPYLVRSQ 245 (456)
Q Consensus 229 ----~~~s~~~d~l~~l~~~~ 245 (456)
..+.+.+|+++.+++++
T Consensus 196 ~~~~~gE~~ltd~i~~li~~g 216 (255)
T 4evw_A 196 QEWERGELYIAPLYNELIQKG 216 (255)
T ss_dssp GGCSCSCCCSTTHHHHHHHTT
T ss_pred ccccCCeEehHHHHHHHHHCC
Confidence 22334678999887654
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.93 E-value=1.1e-24 Score=208.10 Aligned_cols=184 Identities=20% Similarity=0.325 Sum_probs=140.0
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
+|++||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|+++... .+.+++++.+.......+.+
T Consensus 3 ~m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~-~~~i~~~l~~g~~~g~~i~~ 80 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPI-TRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRD-LPLYRDLLGDGSQFGVRFSY 80 (295)
T ss_dssp SCEEEEECCCCCSTTTTT-TTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTSEEEE
T ss_pred ceEEEEECCCCCCccccc-cCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccch-HHHHHHHhhhccccCceEEE
Confidence 589999999999999999 8999999999999999999999999999999999886332 34566666542111233556
Q ss_pred EEccCCcChHHHHHHHHhcCCCCcEEEEcCCcc-cCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCC
Q 012817 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLV-SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (456)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~i-~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
..++.+.|++++++.+.+.+.+++++++.||.+ .+.++.++++.|.+.+..++++..++. + |
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--d---------------p 143 (295)
T 1lvw_A 81 RVQEEPRGIADAFIVGKDFIGDSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR--D---------------P 143 (295)
T ss_dssp EECSSCCCGGGHHHHTHHHHTTSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS--C---------------C
T ss_pred eeCCCCCChHHHHHHHHHHhCCCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC--C---------------c
Confidence 656667899999999988876677888889954 467899999999876667777665543 2 5
Q ss_pred CcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHH
Q 012817 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (456)
Q Consensus 161 ~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~ 223 (456)
..|+++.+|+++++ ..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 144 ~~~g~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~f~~~~l~~~ 187 (295)
T 1lvw_A 144 RPFGVVEFDSEGRV-ISIEE-----KPS-------------RPKSNYVVPGLYFYDNQVVEIA 187 (295)
T ss_dssp TTSEEEEECTTSBE-EEEEE-----SCS-------------SCSCSEECCSEEEECTTHHHHH
T ss_pred ccCCEEEECCCCcE-EEEEE-----CCC-------------CCCCCEEEEEeEEEcHHHHHHH
Confidence 57999999987764 34432 210 1135678999999999998755
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.93 E-value=8.5e-25 Score=208.90 Aligned_cols=184 Identities=20% Similarity=0.318 Sum_probs=139.1
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
.|++||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|+++... .+.+++++.+.......+.+
T Consensus 3 ~m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~~ 80 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPI-TRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPED-KGYFQRLLGDGSEFGIQLEY 80 (296)
T ss_dssp CCEEEEECCCCCGGGHHH-HTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEEE
T ss_pred ccEEEEECCCCCCcCCcc-cCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhH-HHHHHHHHhcccccCceEEE
Confidence 478999999999999999 8999999999999999999999999999999999886332 34566666542111233555
Q ss_pred EEccCCcChHHHHHHHHhcCCCCcEEEEcCCc-ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCC
Q 012817 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (456)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~-i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
..++.+.|++++++.+.+.+.+++++++.||. +.+.++.++++.|.+.+..++++..++. + |
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--d---------------p 143 (296)
T 1mc3_A 81 AEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM--D---------------P 143 (296)
T ss_dssp EECSSCCCSTHHHHHTHHHHTTSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS--C---------------C
T ss_pred eccCCCCCHHHHHHHHHHHhCCCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC--C---------------c
Confidence 65666789999999998887667787778994 4467899999999776667777665543 2 5
Q ss_pred CcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHH
Q 012817 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (456)
Q Consensus 161 ~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~ 223 (456)
..|+++.+|++++ +..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 144 ~~yg~v~~d~~g~-v~~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 187 (296)
T 1mc3_A 144 ERFGVVEFDDNFR-AISLEE-----KPK-------------QPKSNWAVTGLYFYDSKVVEYA 187 (296)
T ss_dssp SSSBBCEEETTEE-EEECCB-----SCS-------------SCSCSEEEEEEEECCTHHHHHH
T ss_pred ccCCEEEECCCCc-EEEEEE-----CCC-------------CCCCCEEEEEEEEEcHHHHHHH
Confidence 6789998887765 444432 211 1135678999999999998654
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.93 E-value=8.5e-25 Score=210.69 Aligned_cols=191 Identities=15% Similarity=0.194 Sum_probs=126.6
Q ss_pred CCceEEEEecCCCCCCcCCCCC-CCccccccc-CCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCcc-
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSK-EVPKALLPV-ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRL- 77 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~-~~pK~llpi-~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~- 77 (456)
|+|++||||||.|+||+|+ +. ..||+|+|+ +|+|||+|+++++.++ +++++|++++.. .+.+.+++.+.+ ..
T Consensus 3 ~~~~avIlAgG~gtRl~pl-t~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~-~~~i~~~~~~~~--~~~ 77 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPL-SRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKH-YFLALEEIKNEI--KNK 77 (308)
T ss_dssp CCEEEEEECC--------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGG-HHHHHHHTTTTC--SSC
T ss_pred CccEEEEEcCCCCccCCcc-CCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhH-HHHHHHHHHHhh--CCC
Confidence 4689999999999999999 64 799999999 5999999999999999 999999998542 235555554411 12
Q ss_pred ceEEEEccCCcChHHHHHHHHhcCCCCc-EEEEcCCccc-CCC-hhHHHHH---HHhcCceEEEEEeecccCCCccCCCC
Q 012817 78 HVEVATVPEDVGTAGALRAIAHHLTAKD-VLVVSGDLVS-DVP-PGAVTAA---HRRHDAVVTAMICSVPVSGLSEAGSS 151 (456)
Q Consensus 78 ~i~~~~~~~~~gt~~al~~~~~~l~~~~-~lv~~~D~i~-~~~-l~~~l~~---~~~~~a~~t~~~~~~~~~~~~~~~~~ 151 (456)
.+.++.++...||+++++.+...+..++ +++++||.++ +.+ +.++++. |.+.++++|+.+.+..
T Consensus 78 ~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~---------- 147 (308)
T 2qh5_A 78 SVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDK---------- 147 (308)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSS----------
T ss_pred ccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCC----------
Confidence 3456666777999999999988885454 9999999876 555 8999987 6667777887766532
Q ss_pred CCcccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHH
Q 012817 152 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 152 ~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
.+..|+++..|+++++ ..+.+++. ....+..+.. .+.++++|+|+|++++|.+.+
T Consensus 148 -------~~~~~g~i~~d~~~~V-~~~~Ekp~----~~~~~~~~~~------g~~~~n~Giy~~~~~~ll~~l 202 (308)
T 2qh5_A 148 -------PNTEFGYIESPNGLDV-KRFIEKPS----LDKAIEFQKS------GGFYFNSGMFVFQAGVFLDEL 202 (308)
T ss_dssp -------CCTTSEEEECSSSSBC-SEEEESCC----HHHHHHHHHH------CCEEEEEEEEEEEHHHHHHHH
T ss_pred -------CCCCceEEEECCCCEE-EEEEECCC----hHHHHHHhhc------CCeEEEeEEEEEEHHHHHHHH
Confidence 1456899988765554 34443221 1111111111 135789999999999874444
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.90 E-value=1.9e-23 Score=202.99 Aligned_cols=190 Identities=19% Similarity=0.229 Sum_probs=131.2
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCC-cchHHHHHHHHHHC-CCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~g-kpli~~~l~~l~~~-gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|.+||||||.|+||+|+|+...||+|+|++| +|||+|+++++..+ |+++++|++++.. .+.+.+++.+. .. ..
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~-~~~i~~~l~~~--~~--~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDY-VERTKKELPEL--PD--EN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGG-HHHHHHHCTTS--CG--GG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHH-HHHHHHHhhcc--cc--ce
Confidence 7899999999999999955889999999999 99999999999986 8999999998542 23455555432 11 23
Q ss_pred EEEccCCcChHHHHHHHHhcCC-CCcEEEEcCCcccCC--ChhH----HHHHHHhcCceEEEEEeecccCCCccCCCCCC
Q 012817 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDV--PPGA----VTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~-~~~~lv~~~D~i~~~--~l~~----~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~ 153 (456)
++.++..+||++++..+...+. ++.+++++||+++.. ++.. +++.|.+.++.+|+.+.+...
T Consensus 77 ii~e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~----------- 145 (336)
T 2x65_A 77 IIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRP----------- 145 (336)
T ss_dssp EEEESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSC-----------
T ss_pred EEeCCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccC-----------
Confidence 4556777999999998877664 345999999977654 4444 444566656777766544321
Q ss_pred cccCCCCCcccEEEecCC----CcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHH
Q 012817 154 KDKTKKPGRYNIIGMDPT----KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 154 ~~~~~~~~~~~iv~~d~~----~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
++.||++..+++ ...+..+.|+++. ...+..+.. ...++|+|+|+|++++|.+.+
T Consensus 146 ------~~~yG~I~~~~~~~~~~~~V~~f~EKp~~----~~a~~~~~~------g~y~~n~Giy~~~~~~ll~~l 204 (336)
T 2x65_A 146 ------ETGYGYIEIGEELEEGVHKVAQFREKPDL----ETAKKFVES------GRFLWNSGMFLWKAREFIEEV 204 (336)
T ss_dssp ------CSSSEEEEEEEEEETTEEEEEEEEESCCH----HHHHHHHHH------TCEEEEEEEEEEEHHHHHHHH
T ss_pred ------CCCceEEEECCccCCCccEEEEEEECCCh----HHHHHHHhc------CCeEEEeeeEEEEHHHHHHHH
Confidence 356899987653 1235555543221 111112211 124789999999999874343
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.89 E-value=1.6e-22 Score=189.04 Aligned_cols=191 Identities=20% Similarity=0.247 Sum_probs=133.4
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.|||||||.|+|| . ||+|+|++|||||+|+++.+.++|+++++|+++. +.+.+++.++ ++.
T Consensus 1 M~~~aiIlA~G~stRl----p---~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~~----~~i~~~~~~~-----g~~ 64 (252)
T 3oam_A 1 MSFTVVIPARYQSTRL----P---GKPLADIGGKPMIQWVYEQAMQAGADRVIIATDD----ERVEQAVQAF-----GGV 64 (252)
T ss_dssp CCEEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEecCcCCCCC----C---CcceeeECCEEHHHHHHHHHHhCCCCeEEEECCH----HHHHHHHHHc-----CCE
Confidence 8899999999999999 2 7999999999999999999999999999999863 3566655442 234
Q ss_pred EEE--ccCCcChHHHHHHHHhcC---CCCcEEEEcCC--cccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCC
Q 012817 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (456)
Q Consensus 81 ~~~--~~~~~gt~~al~~~~~~l---~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~ 153 (456)
+++ ++.+.||++ +..+.+.+ ..+.++++.|| ++...+++.+++.|.+.++++++++.+.. +|.+.
T Consensus 65 v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~----- 136 (252)
T 3oam_A 65 VCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEV----- 136 (252)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHH-----
T ss_pred EEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHh-----
Confidence 443 345578887 55565665 34679999999 46677899999999988888888887664 22110
Q ss_pred cccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHhc
Q 012817 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (456)
Q Consensus 154 ~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~ 226 (456)
.+| ..+.+.+|++++++.+...+...+++ ...........+.++++|+|+|++++|..+...
T Consensus 137 ----~~p-~~g~vv~d~~g~v~~fsr~~i~~~~~------~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~ 198 (252)
T 3oam_A 137 ----FNP-NAVKVITDKSGYALYFSRATIPWDRD------NFAKADKAIVQPLLRHIGIYAYRAGFINTYLDW 198 (252)
T ss_dssp ----TCT-TSCEEEECTTSBEEEEESSCSSCCHH------HHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHS
T ss_pred ----hCC-CceEEEECCCCeEEEEeCCCCCCCCC------ccccccccccccceEEEEEEEcCHHHHHHHHcC
Confidence 011 23788899888866554321111111 000000000135678999999999999887643
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.88 E-value=1.2e-22 Score=197.41 Aligned_cols=186 Identities=20% Similarity=0.246 Sum_probs=127.5
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCC-cchHHHHHHHHHHC-CCCEEEEEecCchhhHHHHhhhhhhccCccc
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~g-kpli~~~l~~l~~~-gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~ 78 (456)
|+|.+||||||.|+||||+|....||+|+|++| +|||+|+++++..+ ++++++|++++.. .+.+.+++.+ ..
T Consensus 1 M~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~-~~~i~~~l~~-----~~ 74 (337)
T 2cu2_A 1 MKTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQ-EAVARPYADG-----IR 74 (337)
T ss_dssp CCEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGG-HHHHGGGCSS-----SE
T ss_pred CCeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHH-HHHHHHHhcc-----Cc
Confidence 889999999999999999943789999999999 99999999999988 8999999998542 2344444432 12
Q ss_pred eEEEEccCCcChHHHHHHHHhcC----CCCcEEEEcCCcccCC--ChhHHHH----HHHhcCceEEEEEeecccCCCccC
Q 012817 79 VEVATVPEDVGTAGALRAIAHHL----TAKDVLVVSGDLVSDV--PPGAVTA----AHRRHDAVVTAMICSVPVSGLSEA 148 (456)
Q Consensus 79 i~~~~~~~~~gt~~al~~~~~~l----~~~~~lv~~~D~i~~~--~l~~~l~----~~~~~~a~~t~~~~~~~~~~~~~~ 148 (456)
. +.++..+||+.++..+.. + .++.+++++||+++.. .|..+++ .|.+ ++.+|+.+.+..
T Consensus 75 ~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~------- 143 (337)
T 2cu2_A 75 L--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR------- 143 (337)
T ss_dssp E--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS-------
T ss_pred e--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC-------
Confidence 2 345667899999887765 3 2467999999976643 4554444 3444 566776655432
Q ss_pred CCCCCcccCCCCCcccEEEecCC---CcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHH
Q 012817 149 GSSGAKDKTKKPGRYNIIGMDPT---KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 149 ~~~~~~~~~~~~~~~~iv~~d~~---~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
.++.||++..+++ ...+..+.|+++ ....+.++. ...++|+|+|+|++++|.+.+
T Consensus 144 ----------~~t~yG~I~~~~~~~~~~~V~~f~EKp~----~~~a~~~~~-------~g~~~n~Giy~f~~~~ll~~l 201 (337)
T 2cu2_A 144 ----------PETEYGYIRLGPREGAWYRGEGFVEKPS----YAEALEYIR-------KGYVWNGGVFAFAPATMAELF 201 (337)
T ss_dssp ----------CCSSSCEEEEEEEETTEEEEEEEECCCC----HHHHHHHHH-------TTCEEEEEEEEECHHHHHHHH
T ss_pred ----------CCCCceEEEECCcccccCeEEEEEeCCC----hHHHHHHhh-------cCCEEEEEEEEEeHHHHHHHH
Confidence 1457999988754 123555554222 111122221 115799999999999874443
No 23
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.88 E-value=3.5e-22 Score=187.01 Aligned_cols=166 Identities=16% Similarity=0.237 Sum_probs=115.2
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|+|.+||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++.. +.+..+... +++.
T Consensus 24 ~~~~aiIlAaG~gtRl~pl-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~-----~~~~ 95 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPL-TENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLK--EQFDYLKEK-----YGVR 95 (254)
T ss_dssp CCCEEEEEECSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTG--GGGTHHHHH-----HCCE
T ss_pred cCceEEEECCCCcccCCcc-cCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcH--HHHHHHHHh-----CCcE
Confidence 4688999999999999999 8999999999999999999999999999999999997542 234433322 2355
Q ss_pred EEEccC--CcChHHHHHHHHhcCCCCcEEEEcCCcccCCC-hhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccC
Q 012817 81 VATVPE--DVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (456)
Q Consensus 81 ~~~~~~--~~gt~~al~~~~~~l~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (456)
++..++ ..|++++++.+.+.+. ++++++||+++..+ +..++ +.++.+++ ... ++
T Consensus 96 iv~~~~~~~~g~~~al~~a~~~~~--~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~~~--~~------------ 152 (254)
T 1jyk_A 96 LVFNDKYADYNNFYSLYLVKEELA--NSYVIDADNYLFKNMFRNDL----TRSTYFSV---YRE--DC------------ 152 (254)
T ss_dssp EEECTTTTTSCTHHHHHTTGGGCT--TEEEEETTEEESSCCCCSCC----CSEEEEEC---EES--SC------------
T ss_pred EEECCCccCCCcHHHHHHHHHHCC--CEEEEeCCcccCHHHHHHHH----hCCceEEE---Ecc--cC------------
Confidence 665444 4689999999888873 58999999655433 33332 22333332 111 11
Q ss_pred CCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHH
Q 012817 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQE 222 (456)
Q Consensus 158 ~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~ 222 (456)
...|+++ +|+++++ ..+.+ ++ .+.++++|+|+|+++.+..
T Consensus 153 --~~~~~v~-~d~~g~v-~~~~e-----~~----------------~~~~~~~Giy~~~~~~~~~ 192 (254)
T 1jyk_A 153 --TNEWFLV-YGDDYKV-QDIIV-----DS----------------KAGRILSGVSFWDAPTAEK 192 (254)
T ss_dssp --SSCCEEE-ECTTCBE-EEEEC-----CC----------------SSEEBCCSEEEECHHHHHH
T ss_pred --CCCeEEE-ECCCCeE-EEEEE-----CC----------------CCCcEEEEEEEEcHHHHHH
Confidence 1246654 7777764 44432 21 1346899999999875543
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.85 E-value=3.5e-20 Score=173.57 Aligned_cols=190 Identities=17% Similarity=0.228 Sum_probs=128.9
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.|||||||.|+|| . +|+|+|++|||||+|+++++.++++++|+|+++. +.+.+++... ++.
T Consensus 17 M~~~aIIlA~G~stRl----p---~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~~----~~i~~~~~~~-----g~~ 80 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL----P---GKPLVDINGKPMIVHVLERARESGAERIIVATDH----EDVARAVEAA-----GGE 80 (264)
T ss_dssp -CCEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEEcCCCCCCC----C---CcceeeECCeEHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCE
Confidence 7789999999999999 2 5999999999999999999999999999999863 2455544432 244
Q ss_pred EEE--ccCCcChHHHHHHHHhcC---CCCcEEEEcCC--cccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCC
Q 012817 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (456)
Q Consensus 81 ~~~--~~~~~gt~~al~~~~~~l---~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~ 153 (456)
++. .+...|++. +..+.+.+ ..+.++++.|| ++....++.+++.+.+.++++++++.+... +.+
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d--~~~------ 151 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHN--AEE------ 151 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCS--HHH------
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCC--HHH------
Confidence 444 334567765 66666655 34679999999 466778999999999888888888876542 111
Q ss_pred cccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHh
Q 012817 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (456)
Q Consensus 154 ~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~ 225 (456)
..+|+... +.+|++++++.+........+ ............+.+.+.|+|+|++++|..+..
T Consensus 152 ---~~~p~~vk-Vv~d~~g~~l~fsr~~ip~~r------~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 152 ---AFNPNAVK-VVLDAEGYALYFSRATIPWDR------DRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp ---HTCTTSCE-EEECTTSBEEEEESSCCSCCH------HHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHH
T ss_pred ---ccCCCceE-EEECCCCeEEEEecCCCCCCC------ccccccccccCCcceEEEEEEEECHHHHHHHHh
Confidence 01233333 457888886655532111111 110000000112467899999999999987754
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.84 E-value=9.6e-20 Score=169.77 Aligned_cols=191 Identities=18% Similarity=0.233 Sum_probs=123.0
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+|| . ||+|+|++|||||+|+++.+.++|+++|+|+++. +.+.+++... ++.
T Consensus 8 M~~~aIIlA~G~stRl----~---~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~~----~~i~~~~~~~-----g~~ 71 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRL----P---GKALVDIAGKPMIQHVYESAIKSGAEEVVIATDD----KRIRQVAEDF-----GAV 71 (256)
T ss_dssp -CCEEEEECCCC---C----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CCceEEEEcCCCCCCC----C---CCCeeeECCchHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCe
Confidence 5678999999999999 2 8999999999999999999999999999999863 3455555432 234
Q ss_pred EEE--ccCCcChHHHHHHHHhcC---CCCcEEEEcCCc--ccCCChhHHHHHHHhc-CceEEEEEeecccCCCccCCCCC
Q 012817 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSG 152 (456)
Q Consensus 81 ~~~--~~~~~gt~~al~~~~~~l---~~~~~lv~~~D~--i~~~~l~~~l~~~~~~-~a~~t~~~~~~~~~~~~~~~~~~ 152 (456)
++. .+...|++. +..+++.+ ..+.++++.||. +....++.+++.+.+. +++++++..+... +.+
T Consensus 72 v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~--~~~----- 143 (256)
T 3tqd_A 72 VCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITE--VDE----- 143 (256)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCC--HHH-----
T ss_pred EEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCC--HHH-----
Confidence 443 234467765 77777776 356799999994 5567899999999874 5566666655432 111
Q ss_pred CcccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHh
Q 012817 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (456)
Q Consensus 153 ~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~ 225 (456)
..+|+.+. +.+|++|+.+.+.....+..++.. ..........+.+...|+|.|++++|..+..
T Consensus 144 ----~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~-----~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 144 ----LFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTF-----SDKENLQLNGSHYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp ----HTCTTSCE-EEECTTSBEEEEESSCSSCCTTTT-----TCGGGCCCSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred ----hhCCCccE-EEECCCCEEeEEecCCCCCCCccc-----ccccccccCCcceEEEEEEEcCHHHHHHHHh
Confidence 11244444 468888886655533221111100 0000000012467899999999999987753
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.79 E-value=8e-18 Score=155.34 Aligned_cols=177 Identities=19% Similarity=0.217 Sum_probs=116.7
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++++.++ +++++|++++. .+.+++.+. +.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~~----~i~~~~~~~------~~ 62 (234)
T 2y6p_A 1 MRRAVIIPARLGSTRL----K---EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDSE----RVKEVVEDL------CE 62 (234)
T ss_dssp -CEEEEEECCSCCTTT----T---TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESCH----HHHHHHTTT------SE
T ss_pred CceEEEEEcCCCCCCC----C---CCcceeECCEEHHHHHHHHHHHh-CCEEEEECChH----HHHHHHHhc------eE
Confidence 7889999999999999 3 99999999999999999999999 99999999752 444444321 33
Q ss_pred EEEccC--CcChHHHHHHHHhcCCCCcEEEEcCCc-ccC-CChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCccc
Q 012817 81 VATVPE--DVGTAGALRAIAHHLTAKDVLVVSGDL-VSD-VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (456)
Q Consensus 81 ~~~~~~--~~gt~~al~~~~~~l~~~~~lv~~~D~-i~~-~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~ 156 (456)
++..++ ..|+++++ .+++.+..+.+++++||. +.+ .+++++++.|.+.++.+++...... +.
T Consensus 63 ~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~----------- 128 (234)
T 2y6p_A 63 VFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKE--AY----------- 128 (234)
T ss_dssp EEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSG--GG-----------
T ss_pred EEECCcccccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHH--Hh-----------
Confidence 443322 46777765 566666667799999996 655 6899999999887654554433111 00
Q ss_pred CCCCCcccEEEecCCCcEEEEeeccccc-ccccccchHHHhhcceeEEecCCccceEEeechHHHHHHHh
Q 012817 157 TKKPGRYNIIGMDPTKQFLLHIATGAEL-EKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (456)
Q Consensus 157 ~~~~~~~~iv~~d~~~~~l~~~~~~~~~-~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~ 225 (456)
.++..+.+ ..|+++++ ..+.+++.. .++ . . . .+.+.++|+|+|+++.|..+..
T Consensus 129 -~~~~~~~~-~~~~~g~v-~~~~e~~~~~~~~-----~--~-----~-~~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 129 -ERPEDVKV-VLDREGYA-LYFSRSPIPYFRK-----N--D-----T-FYPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp -GCTTSCEE-EECTTSBE-EEEESSCCSCCSS-----C--C-----S-SCCEEEEEEEEEEHHHHHHHHH
T ss_pred -cCCCceEE-EEcCCCCE-eeeecCCCCcccc-----c--c-----c-ceeeEEEEEEEcCHHHHHHHHh
Confidence 01333333 44666653 444332100 000 0 0 0 0245799999999999877653
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.78 E-value=2.5e-18 Score=160.07 Aligned_cols=187 Identities=20% Similarity=0.254 Sum_probs=120.6
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHH-HHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVL-EQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l-~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
+.|||||||.|+|| .+|+|+|++|||||+|++ +.+.++++++|+|++++. .+.+++... ++.+
T Consensus 2 ~~aiIlA~G~stR~-------~~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~~----~i~~~~~~~-----g~~v 65 (253)
T 4fcu_A 2 KHIVIPARFSSSRL-------PGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDE----RIAEICRAE-----GVDV 65 (253)
T ss_dssp EEEEEECCSCCTTS-------TTGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESCH----HHHHHHHTT-----TCCE
T ss_pred eEEEEEeCCCCCCC-------CCCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCHH----HHHHHHHHc-----CCeE
Confidence 46999999999999 259999999999999999 999988999999999743 455444332 2334
Q ss_pred EE--ccCCcChHHHHHHHHhcCC---CCcEEEEcCC--cccCCChhHHHHHHHhc-CceEEEEEeecccCCCccCCCCCC
Q 012817 82 AT--VPEDVGTAGALRAIAHHLT---AKDVLVVSGD--LVSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSGA 153 (456)
Q Consensus 82 ~~--~~~~~gt~~al~~~~~~l~---~~~~lv~~~D--~i~~~~l~~~l~~~~~~-~a~~t~~~~~~~~~~~~~~~~~~~ 153 (456)
+. .+...|+ +++..+++.+. .+.++++.|| ++....++.+++.+.+. ++.+..++.+... ..+
T Consensus 66 ~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~--~~~------ 136 (253)
T 4fcu_A 66 VLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHA--LDE------ 136 (253)
T ss_dssp EECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCC--HHH------
T ss_pred EEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCC--HHH------
Confidence 33 2334566 46777766653 3669999999 46667899999999876 3343333333211 000
Q ss_pred cccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHHhhcceeEEecCCccceEEeechHHHHHHH
Q 012817 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 154 ~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
..+|+.+. +..|++|+++.+........++.. ...........+.+.|+|+|++++|..+.
T Consensus 137 ---~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~------~~~~~~~~~~~~~~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 137 ---FQRDSIVK-VVMSKQNEALYFSRATIPYDRDGA------KRDEPTLHTQAFRHLGLYAYRVSLLQEYV 197 (253)
T ss_dssp ---HHCTTSCE-EEECTTSBEEEEESSCCSCCTTTS------SSSSCCCCSCCEEEEEEEEEEHHHHHHHT
T ss_pred ---ccCCCccE-EEECCCCeEEEecCCCCCCCCCcc------cccccccccceeEEEEEEEeCHHHHHHHH
Confidence 11255544 567888887665543222122110 00000001244679999999999998775
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.77 E-value=2.1e-17 Score=153.64 Aligned_cols=123 Identities=18% Similarity=0.214 Sum_probs=93.5
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCC-CEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNI-KDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi-~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+.++++ ++++|++++. .+.+++.+. ++
T Consensus 1 m~~~aiIlA~G~~~R~----~---~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~~----~i~~~~~~~-----~~ 64 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRL----P---GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDP----RVEQAVQAF-----GG 64 (245)
T ss_dssp CCEEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESCH----HHHHHHHHT-----TC
T ss_pred CCeEEEEEcCCcCCCC----C---CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCcH----HHHHHHHHc-----CC
Confidence 8899999999999999 3 9999999999999999999999996 9999999752 445444332 24
Q ss_pred EEEEc--cCCcChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhHHHHHHHhc-CceEEEEEeec
Q 012817 80 EVATV--PEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSV 140 (456)
Q Consensus 80 ~~~~~--~~~~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~~l~~~~~~-~a~~t~~~~~~ 140 (456)
.++.. +...|+++++ .+++.+..+.+++++||. +...+++.+++.|.+. ++++++++.+.
T Consensus 65 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 129 (245)
T 1h7e_A 65 KAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAI 129 (245)
T ss_dssp EEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred eEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecC
Confidence 55543 2335665544 555555556799999994 5566799999999887 77776666554
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.76 E-value=2.5e-17 Score=154.72 Aligned_cols=189 Identities=16% Similarity=0.202 Sum_probs=118.4
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.|||||||.|+|| . +|+|+|++|||||+|+++.+.++++++++|++++. .+.+++... ++.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~~----~i~~~~~~~-----~~~ 64 (262)
T 1vic_A 1 MSFTVIIPARFASSRL----P---GKPLADIKGKPMIQHVFEKALQSGASRVIIATDNE----NVADVAKSF-----GAE 64 (262)
T ss_dssp -CCEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESCH----HHHHHHHHT-----TCE
T ss_pred CCcEEEEEcCCCCCCC----C---CCccccCCCeEHHHHHHHHHHhCCCceEEEECCcH----HHHHHHHhc-----CCE
Confidence 8899999999999999 2 49999999999999999999999999999998743 344444331 244
Q ss_pred EEEcc--CCcChHHHHHHHHhcC---CCCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCC
Q 012817 81 VATVP--EDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (456)
Q Consensus 81 ~~~~~--~~~gt~~al~~~~~~l---~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~ 153 (456)
++..+ ...|++ .+..+.+.+ ..+.+++++||. +...+++.+++.+.+.++++++++.+... +.+.
T Consensus 65 ~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~~~----- 136 (262)
T 1vic_A 65 VCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHD--AEEL----- 136 (262)
T ss_dssp EEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCC--HHHH-----
T ss_pred EEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCC--HHHh-----
Confidence 54432 234555 344454444 345699999994 55678999999998877777776665432 1000
Q ss_pred cccCCCCCcccEEEecCCCcEEEEeecccccccccccchHHH----hhcceeEEecCCccceEEeechHHHHHHH
Q 012817 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSIL----RAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 154 ~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
. ...+..+..|++++++.+.. +......... .+...-.+.....++|+|+|++++|..+.
T Consensus 137 ----~-~~~~~~~~~~~~g~v~~f~~------~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 137 ----F-NPNAVKVLTDKDGYVLYFSR------SVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp ----T-CTTSCEEEECTTSBEEEEES------SCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHH
T ss_pred ----c-CCCceEEEECCCCCEeeeec------CCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHH
Confidence 0 11233344566666543332 1100000000 00000011235689999999999887654
No 30
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.74 E-value=1e-16 Score=158.19 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=41.2
Q ss_pred cEEEEcCCcccCC--ChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecCCC-cEEEEeecc
Q 012817 105 DVLVVSGDLVSDV--PPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTK-QFLLHIATG 181 (456)
Q Consensus 105 ~~lv~~~D~i~~~--~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~-~~l~~~~~~ 181 (456)
.-|+-.+|+++.. +|.+++++|. +++.. . ++ +..+++..+|+.+ ..+ .+.+
T Consensus 12 ~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~--~~---------------~~~~Gv~~ld~a~~g~I-~F~e- 65 (374)
T 2iu8_A 12 SGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG--N--GA---------------TLLSGVEEIEEAKTAHI-TFLD- 65 (374)
T ss_dssp ---------CCSCCEEHHHHHHHTT-----CEEES--C--TT---------------CEECEECCTTTCCTTEE-EECC-
T ss_pred cCcccCccccccCcCcHHHHHHhhC-----CEEEC--C--Cc---------------ceEEEEeccccCCCCeE-EEEe-
Confidence 3567789999987 8999999885 24432 1 11 4567888887533 234 4543
Q ss_pred cccccccccchHHHhhcceeEEecCCccceEEeechHHHH
Q 012817 182 AELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQ 221 (456)
Q Consensus 182 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~giYi~~~~vl~ 221 (456)
|+...+ ...+.++|+|+|+++++.
T Consensus 66 ----kPk~~~------------~~~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 66 ----NEKYAK------------HLKSSEAGAIIISRTQFQ 89 (374)
T ss_dssp ----SSSTHH------------HHHTCCCSEEEEEHHHHH
T ss_pred ----Cchhhh------------hhhcCCcEEEEeChhHhh
Confidence 221100 124679999999999774
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.72 E-value=1e-16 Score=149.13 Aligned_cols=127 Identities=14% Similarity=0.159 Sum_probs=90.3
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
++.+||||||.|+||.+ ...||+|+|++|||||+|+|+++.+++ +++++|++++... +.+.+.+..+... ..+.
T Consensus 3 ~~~aIIlAaG~g~Rm~~---~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~-~~~~~~~~~~~~~-~~~~ 77 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGN---VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWM-NHAEDNIKKYISD-DRIV 77 (246)
T ss_dssp CEEEEEECC-----C-C---SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGH-HHHHHHHHHHCCC-TTEE
T ss_pred ccEEEEECCccccccCC---CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHH-HHHHHHHHHhCCC-CCEE
Confidence 46899999999999953 268999999999999999999999997 9999999985532 2344434333222 1233
Q ss_pred EEEccCCcChHHHHHHHHhcCC-------CCcEEEEcCC--cccCCChhHHHHHHHhcCceEEE
Q 012817 81 VATVPEDVGTAGALRAIAHHLT-------AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTA 135 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~-------~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a~~t~ 135 (456)
++ ....+..++++.+++.+. .+.++++.|| ++....++++++.+.+.++.+++
T Consensus 78 ~~--~~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~ 139 (246)
T 3f1c_A 78 VI--EGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTV 139 (246)
T ss_dssp EE--ECCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEE
T ss_pred EE--CCCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEE
Confidence 33 445677888888876653 3569999999 57777899999999988766554
No 32
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.70 E-value=1.1e-16 Score=147.11 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=92.3
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+.+++ +++++|++++. .+.+++... .+
T Consensus 3 m~~~aiIlA~G~g~R~----~---~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~~----~i~~~~~~~-----~~ 66 (228)
T 1ezi_A 3 KQNIAVILARQNSKGL----P---LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGG----LIAEEAKNF-----GV 66 (228)
T ss_dssp CEEEEEEECCSSCSSS----T---TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESCH----HHHHHHHHT-----TC
T ss_pred CceEEEEecCCCCCCC----C---CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCCH----HHHHHHHHc-----CC
Confidence 3345999999999999 3 999999999999999999999988 79999999743 344444322 23
Q ss_pred EEEEcc-----CCcChHHHHHHHHhcCC--CCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEeec
Q 012817 80 EVATVP-----EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSV 140 (456)
Q Consensus 80 ~~~~~~-----~~~gt~~al~~~~~~l~--~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~~ 140 (456)
.++..+ ...|+.++++.+++.+. .+.++++.||. +...+++.+++.+.+.++++++...+.
T Consensus 67 ~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 136 (228)
T 1ezi_A 67 EVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPM 136 (228)
T ss_dssp EEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEEC
T ss_pred EEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 333222 34677899999887764 35699999994 556689999998877777776666554
No 33
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.70 E-value=8.2e-16 Score=153.89 Aligned_cols=193 Identities=12% Similarity=0.118 Sum_probs=128.6
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccC-CcchHHHHHHHHHHC----CCC-EEEEEecCchhhHHHHhhhhhhccC
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~-gkpli~~~l~~l~~~----gi~-~v~iv~~~~~~~~~i~~~~~~~~~~ 75 (456)
++.+||||||.|+|| +...||+|+|+. |||+|++.++++.+. |+. .++|.+.... .+.+++|+.+....
T Consensus 79 k~~vviLAGGlGTRL----g~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t-~e~t~~~f~~~~~f 153 (469)
T 2icy_A 79 KLVVLKLNGGLGTTM----GCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNT-HDDTHKIVEKYTNS 153 (469)
T ss_dssp TEEEEEEECCBSGGG----TCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTT-HHHHHHHHGGGTTS
T ss_pred cceEEEEcCCccccC----CCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCC-HHHHHHHHHhcccC
Confidence 578999999999999 778999999999 999999999999876 532 4555554332 35677777654222
Q ss_pred ccceEEEEcc------------------------CCcChHHHHHHH-----Hhc-C--CCCcEEEEcCCcccCCChhHHH
Q 012817 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHH-L--TAKDVLVVSGDLVSDVPPGAVT 123 (456)
Q Consensus 76 ~~~i~~~~~~------------------------~~~gt~~al~~~-----~~~-l--~~~~~lv~~~D~i~~~~l~~~l 123 (456)
..++.++.|+ .+.|+++++..+ ++. + ..++++|.++|.+.......++
T Consensus 154 G~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll 233 (469)
T 2icy_A 154 NVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTIL 233 (469)
T ss_dssp SSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHH
T ss_pred CceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHH
Confidence 3445554332 357899887654 222 2 2478999999988776545799
Q ss_pred HHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecCCCc-EEEEeecccccccccccchHHHhhcceeE
Q 012817 124 AAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRKSILRAVGQMD 202 (456)
Q Consensus 124 ~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~-~l~~~~~~~~~~k~~~~~~~~~~~~~~~~ 202 (456)
.+|.++++++++.+.+... + ...+|++... +++ .++.+.+.+. ..... ++ . .
T Consensus 234 ~~~~~~~a~~t~~v~~k~~--~--------------~~~~Gvl~~~-dg~~~vvE~~e~p~-----~~~~e-~k-~---~ 286 (469)
T 2icy_A 234 KHLIQNKNEYCMEVTPKTL--A--------------DVKGGTLISY-EGKVQLLEIAQVPD-----EHVNE-FK-S---I 286 (469)
T ss_dssp HHHHHHTCSEEEEEEECCT--T--------------CCSSCEEEEE-TTEEEEECGGGSCG-----GGHHH-HH-S---S
T ss_pred HHHHHcCCCeeEEEEEecc--C--------------CCceeEEEEE-CCEEEEEEEeccCh-----hhhhh-hc-c---c
Confidence 9999999999988876542 1 1357887753 233 2333332111 00000 00 0 0
Q ss_pred EecCCccceEEeechHHHHHHHhc
Q 012817 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (456)
Q Consensus 203 ~~~~~~~~giYi~~~~vl~~~~~~ 226 (456)
....+.|+|+|+|++++|..++.+
T Consensus 287 ~~~~~~N~g~y~~~~~~L~~i~~~ 310 (469)
T 2icy_A 287 EKFKIFNTNNLWVNLKAIKKLVEA 310 (469)
T ss_dssp SSCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccceeeEEEEEEcHHHHHHHHhc
Confidence 123456999999999999888654
No 34
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.70 E-value=2.9e-16 Score=144.97 Aligned_cols=123 Identities=18% Similarity=0.259 Sum_probs=82.3
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHC-CCCEEEEEecCchhhHHHHhhhhhhcc-CccceE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYV-DRLHVE 80 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~-gi~~v~iv~~~~~~~~~i~~~~~~~~~-~~~~i~ 80 (456)
|.+||||||.|+||.+ ...||+|+|++|+|||+|+++++.++ ++++++|++++... +.+.+++.++.. -.....
T Consensus 3 ~~~iIlA~G~g~R~~~---~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI---SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWV-SHAEDLVDKYLPLYKERII 78 (236)
T ss_dssp EEEEEEEC--------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGH-HHHHHHHHHHCGGGGGGEE
T ss_pred eEEEEeCCccccccCC---CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHH-HHHHHHHHhccccccCceE
Confidence 6899999999999965 35799999999999999999999998 49999999986531 345554433210 001122
Q ss_pred EEEccCCcChHHHHHHHHhcC----C--C-CcEEEEcCCc--ccCCChhHHHHHHHhcCc
Q 012817 81 VATVPEDVGTAGALRAIAHHL----T--A-KDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l----~--~-~~~lv~~~D~--i~~~~l~~~l~~~~~~~a 131 (456)
+ .+...|+.++++.+++.+ . + +.+++++||. +...+++.+++.|.+.++
T Consensus 79 ~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 79 I--TKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp E--EECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred E--ECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 2 234467888888887765 2 3 5688899995 556689999999987765
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.70 E-value=1.1e-15 Score=139.86 Aligned_cols=125 Identities=20% Similarity=0.160 Sum_probs=91.9
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.+||||||.|+||+ ...||+|+|++|+|||+|+++.+.+++ +++++|++++... +.+..++. ...+
T Consensus 1 m~~~~vIlA~G~g~R~~----~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~-----~~~v 70 (223)
T 2xwl_A 1 MATVAVVPAAGSGERLR----AGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALT-DESKLVFG-----GEDS 70 (223)
T ss_dssp -CEEEEEECCCCCGGGT----SSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGH-HHHHHHTC-----BTTE
T ss_pred CceEEEEECCccCcccC----CCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHH-HHHHHHhc-----cCCe
Confidence 88999999999999994 457999999999999999999999987 8999999985431 23444331 1234
Q ss_pred EEEEccCCcChHHHHHHHHhcC-CCCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEe
Q 012817 80 EVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMIC 138 (456)
Q Consensus 80 ~~~~~~~~~gt~~al~~~~~~l-~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~ 138 (456)
.+. .+..+++++++.+++.+ ..+.+++++||. +...+++.+++.+. .+.++++.+.
T Consensus 71 ~~~--~~~~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~ 129 (223)
T 2xwl_A 71 VIV--SGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGL 129 (223)
T ss_dssp EEE--ECCSSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEE
T ss_pred EEE--cCCCCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEE
Confidence 444 23456789999998887 445688899994 45557999999883 2234444443
No 36
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.69 E-value=6.9e-17 Score=148.88 Aligned_cols=118 Identities=25% Similarity=0.325 Sum_probs=92.5
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|+|.+||||||. +||.+. ....||+|+|++|+|||+|+++.+..++. +++|++.. +.+.+++ ++.
T Consensus 1 m~~~~vIlAaG~-tRl~~r-~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~----~~i~~~~--------~~~ 65 (232)
T 2dpw_A 1 MRPSAIVLAGGK-EAWAER-FGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN----PGLVPAP--------ALT 65 (232)
T ss_dssp CCCEEEEECCCB-CSGGGT-TTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC----SSCSSCC--------SEE
T ss_pred CceeEEEECCCC-Cccccc-cCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh----HHHhhhc--------CeE
Confidence 889999999999 766655 34589999999999999999999999988 88887542 1233222 233
Q ss_pred EEEccCCcChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhHHHHHHHhcCceEEEEEee
Q 012817 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICS 139 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~t~~~~~ 139 (456)
+ +...|++++++.+++.+. +.+++++||. +...+++.+++ | +.++++++...+
T Consensus 66 ~---~~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 66 L---PDRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp E---CCCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred e---cCCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 3 567899999999998886 7899999995 66677999998 6 556677666554
No 37
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.69 E-value=7.6e-16 Score=141.91 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=73.6
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
+|.+||||||.|+||+|+ ||+|+|++|+|||+|+++++.++ +++++|++ +.. +.+.+++...+ ..++.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~-----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~--~~~~~~~~~~~--~~~~~~ 86 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRY--ADDIDAFLKDK--GFNYKI 86 (232)
T ss_dssp CEEEEEEECC------CC-----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STT--HHHHHHHHTTS--CCCEEE
T ss_pred cceEEEECCcCcCcCCCC-----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CCh--HHHHHHHHHhc--CCcEEE
Confidence 478999999999999654 99999999999999999999988 99999998 432 23333322211 123566
Q ss_pred EEccCC-cChHHHHHHHHhcCCCCcEEEEcCCcccC
Q 012817 82 ATVPED-VGTAGALRAIAHHLTAKDVLVVSGDLVSD 116 (456)
Q Consensus 82 ~~~~~~-~gt~~al~~~~~~l~~~~~lv~~~D~i~~ 116 (456)
+..+.. .|++++++.+++.+. +++++++||..++
T Consensus 87 v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~~D~p~~ 121 (232)
T 2xme_A 87 VRHDRPEKGNGYSLLVAKNHVE-DRFILTMGDHVYS 121 (232)
T ss_dssp EECSCGGGCHHHHHHTTGGGCC-SSEEEEETTEEEC
T ss_pred EECCCCCCCcHHHHHHHHHHCC-CCEEEEcCCcccC
Confidence 654444 799999999998886 6799999997654
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.67 E-value=7.2e-16 Score=141.61 Aligned_cols=120 Identities=17% Similarity=0.241 Sum_probs=85.1
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHC-CCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~-gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
++.+||||||.|+|| ....||+|+|++|+|||+|+++.+.++ ++++++|++++... .+.+++...+ ..++.
T Consensus 4 ~~~aiIlAaG~g~R~----~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~--~~~~~~~~~~--~~~v~ 75 (228)
T 2yc3_A 4 SVSVILLAGGQGKRM----KMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFR--DIFEEYEESI--DVDLS 75 (228)
T ss_dssp CEEEEEECCCCC-----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGH--HHHHTTTTTS--SSEEE
T ss_pred ceEEEEECCcccccc----CCCCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHH--HHHHHHHHhC--CCcEE
Confidence 478999999999999 445799999999999999999999998 79999999985431 2333232211 11233
Q ss_pred EEEccCCcChHHHHHHHHhcCCC--CcEEEEcCC--cccCCChhHHHHHHHhcCc
Q 012817 81 VATVPEDVGTAGALRAIAHHLTA--KDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~~--~~~lv~~~D--~i~~~~l~~~l~~~~~~~a 131 (456)
++ ....|+.++++.+++.+.. +.++++.|| ++...+++.+++.|.+.++
T Consensus 76 ~~--~~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 76 FA--IPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp EE--CCCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred EE--CCCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcCc
Confidence 33 3447889999999988753 457888898 4555679999999877654
No 39
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.64 E-value=3.2e-15 Score=138.35 Aligned_cols=138 Identities=17% Similarity=0.259 Sum_probs=99.1
Q ss_pred cCcch----hhcccCHHHHHHHhHhhhccccccC--CCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-e
Q 012817 308 SNSKY----CVRLNSIQAFMDINRDVIGEANHLS--GYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-R 380 (456)
Q Consensus 308 ~~~~~----~~~i~~~~~y~~~~~~~l~~~~~~~--~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~ 380 (456)
...+| |.++++ |++.++.+|....... ...........++.+.|++++.|++++.||++|.|++++.|. +
T Consensus 45 ~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~ 121 (240)
T 3r8y_A 45 KKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIG 121 (240)
T ss_dssp SSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEECTTCEECTT
T ss_pred CCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEECCCCEECCC
Confidence 44555 888876 7788887764321110 000111122234455555556666666666666666666663 4
Q ss_pred eEECCCCEECCCcEEe-CeEECCCCEECCCcEEcC---------eEECCCCEECCCcEe-cCeEECCCCEECCCcEEcC
Q 012817 381 SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQG---------SVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~~---------~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~ 448 (456)
++||++|.|+.+|.|+ +|+|+++|.||+++.+.+ ++|+++|.||.+++| .+++||++++|++++.+.+
T Consensus 122 ~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 122 AVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 7999999999999997 899999999999999986 999999999999988 7999999999999998865
No 40
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.64 E-value=6.9e-15 Score=135.26 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=81.4
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|+|.+||||||.|+||++ ..||+|+|++|+|||+|+++.+..++ +++++|++++.. +.+.+ +.+... ..+
T Consensus 5 ~~~~aiIlA~G~g~R~~~----~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~~--~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA----DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPED--TFADK-VQTAFP--QVR 75 (231)
T ss_dssp CCEEEEEECC--------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTC--STHHH-HHHHCT--TSE
T ss_pred CceEEEEEcccccccCCC----CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccH--HHHHH-HHhcCC--Cce
Confidence 467899999999999953 47999999999999999999999885 899999997542 23443 322111 123
Q ss_pred EEEEccCCcChHHHHHHHHhcC-------CCCcEEEEcCC--cccCCChhHHHHHHHhcC
Q 012817 80 EVATVPEDVGTAGALRAIAHHL-------TAKDVLVVSGD--LVSDVPPGAVTAAHRRHD 130 (456)
Q Consensus 80 ~~~~~~~~~gt~~al~~~~~~l-------~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~ 130 (456)
.+ ..+..|++++++.+++.+ ..+.+++++|| ++....++.+++.+.+.+
T Consensus 76 ~~--~~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 76 VW--KNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp EE--CCCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred EE--EcCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 33 345678999999887665 34679999999 344567999999887654
No 41
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.62 E-value=7.5e-15 Score=130.92 Aligned_cols=108 Identities=16% Similarity=0.278 Sum_probs=92.3
Q ss_pred ccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe----eeEECCCCEECCCcEEe------CeEECCCCEECCCc
Q 012817 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVV------NSVVMNHVTIGDGC 410 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i~------~s~i~~~~~ig~~~ 410 (456)
+..+...|++++.|++++.|.+++.||++|.|++++.|. +.+||++|.|+++|.|. +++|+++|.||+++
T Consensus 29 ~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~ 108 (191)
T 3ixc_A 29 YAGVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSC 108 (191)
T ss_dssp BTTBCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTC
T ss_pred ccCCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCC
Confidence 344667777888888888888888888888888888886 34999999999999998 89999999999999
Q ss_pred EEcCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 411 SIQGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 411 ~i~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
.|.+++|+++|.||++++|. ++.||++++|++++.+..
T Consensus 109 ~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~ 147 (191)
T 3ixc_A 109 ILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTR 147 (191)
T ss_dssp EECSCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECC
Confidence 99999999999999999885 588888888888877764
No 42
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.61 E-value=1.1e-14 Score=127.64 Aligned_cols=107 Identities=17% Similarity=0.268 Sum_probs=91.8
Q ss_pred cCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee----eEECCCCEECCCcEEe-----CeEECCCCEECCCcEE
Q 012817 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSI 412 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~----s~Ig~~~~ig~~~~i~-----~s~i~~~~~ig~~~~i 412 (456)
......+++++.|++++.+.+++.||++|.|++++.|.. ++||++|.|+++|.|. +++|+++|.||+++.|
T Consensus 9 ~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i 88 (173)
T 1xhd_A 9 KEKKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVIL 88 (173)
T ss_dssp TTBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEE
T ss_pred CCCCCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEE
Confidence 345666777888888888878888888888888888874 7999999999999998 7899999999999999
Q ss_pred cCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 413 QGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 413 ~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
.+++|+++|.|+++++|. ++.||++++|++++.+..
T Consensus 89 ~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~ 125 (173)
T 1xhd_A 89 HSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQ 125 (173)
T ss_dssp ESCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECC
Confidence 999999999999999875 688888888888888763
No 43
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.60 E-value=1.5e-14 Score=129.33 Aligned_cols=108 Identities=15% Similarity=0.255 Sum_probs=86.8
Q ss_pred CCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe----eeEECCCCEECCCcEEe-----------------CeEEC
Q 012817 343 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVV-----------------NSVVM 401 (456)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i~-----------------~s~i~ 401 (456)
.++..|+|++.|++++.|++++.||++|.|+++|.|. +..||++|.|++++.|. +++|+
T Consensus 10 ~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig 89 (194)
T 3tv0_A 10 QKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIG 89 (194)
T ss_dssp --CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEEC
T ss_pred CCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEEC
Confidence 3577788888888888888888888888888888885 36899999999999985 35788
Q ss_pred CCCEECCCcEEcCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcCCe
Q 012817 402 NHVTIGDGCSIQGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKGES 450 (456)
Q Consensus 402 ~~~~ig~~~~i~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~~ 450 (456)
+++.|+.++.+.++.|++++.|+.+++|. ++.||++++|++++.+...+
T Consensus 90 ~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~ 139 (194)
T 3tv0_A 90 TNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFE 139 (194)
T ss_dssp SSCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCE
T ss_pred CcceEecceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCCc
Confidence 99999988888888888888888888774 77777777777777776543
No 44
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.60 E-value=6.1e-15 Score=135.55 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=92.1
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++.+.+++ +++++|++... .+.+++... ++
T Consensus 2 ~~~~aiIlA~G~s~R~----~---~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~~~----~i~~~~~~~-----g~ 65 (229)
T 1qwj_A 2 PHLAALVLARGGSKGI----P---LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHD----EIENVAKQF-----GA 65 (229)
T ss_dssp CCEEEEEECCSCCSSS----S---CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESCH----HHHHHHHHT-----TC
T ss_pred CcEEEEEEcCCCCCCC----C---CcccceECCEEHHHHHHHHHHhCCCcCEEEEECChH----HHHHHHHHc-----CC
Confidence 7788999999999999 2 599999999999999999999988 69999998532 444444332 24
Q ss_pred EEEEcc-----CCcChHHHHHHHHhcC-CCCcEEEEcCC--cccCCChhHHHHHHHhcCceEEEEEe
Q 012817 80 EVATVP-----EDVGTAGALRAIAHHL-TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMIC 138 (456)
Q Consensus 80 ~~~~~~-----~~~gt~~al~~~~~~l-~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a~~t~~~~ 138 (456)
.++..+ ...+..++++.+++.+ ..+.++++.|| ++...+++.+++.|.+.+++.++.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 132 (229)
T 1qwj_A 66 QVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV 132 (229)
T ss_dssp EEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred EEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 444433 1234458888888877 34669999999 45567899999999887776544443
No 45
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=7.8e-16 Score=137.98 Aligned_cols=128 Identities=20% Similarity=0.318 Sum_probs=88.2
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~ 82 (456)
|++||||||.|+||.| .||+|+|++|+|||+|+++++.++++++++|++++.. +.+.+++.+.+.....+.++
T Consensus 1 m~aiIlA~G~s~R~~~-----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~--~~i~~~~~~~~~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG-----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNT--PKTKEYINSAYKDYKNIVVI 73 (196)
T ss_dssp CEEEEEC----CGGGG-----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTC--HHHHHHHHHHTTTTTEEEE-
T ss_pred CEEEEECCCCCCcCCC-----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCCh--HHHHHHHHhhccCCCCEEEE
Confidence 6899999999999954 6999999999999999999999999999999997552 35555554422111123333
Q ss_pred EccCCcChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhHHHHHHHh-----cCceEEEEEee
Q 012817 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRR-----HDAVVTAMICS 139 (456)
Q Consensus 83 ~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~~l~~~~~-----~~a~~t~~~~~ 139 (456)
.+...|++++++.+++.+ .+.++++.||. +....++++++.+.+ .+.+..+.+.+
T Consensus 74 -~~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p 135 (196)
T 3rsb_A 74 -DTSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIP 135 (196)
T ss_dssp --------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEE
T ss_pred -ECCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEE
Confidence 344578888888888877 68899999995 677789999999987 55555444443
No 46
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.59 E-value=3.8e-14 Score=130.77 Aligned_cols=119 Identities=20% Similarity=0.244 Sum_probs=88.7
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.+||||||.|+|| ....||+|+|++|+|||+|+++.+.+++ +++++|++++.. +.+.. +.... . ..+
T Consensus 6 ~~~~~iIlA~G~g~R~----~~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~-~-~~v 76 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRM----QTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGD--SRFAQ-LPLAN-H-PQI 76 (236)
T ss_dssp CCEEEEEEECCCCGGG----CCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTC--CSGGG-SGGGG-C-TTE
T ss_pred CceeEEEECCcCcccc----CCCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccH--HHHHH-HHhcC-C-CCE
Confidence 5689999999999999 4457999999999999999999999887 899999997542 12322 22211 1 124
Q ss_pred EEEEccCCcChHHHHHHHHhcCC-CCcEEEEcCCc--ccCCChhHHHHHHHhcC
Q 012817 80 EVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (456)
Q Consensus 80 ~~~~~~~~~gt~~al~~~~~~l~-~~~~lv~~~D~--i~~~~l~~~l~~~~~~~ 130 (456)
.++ ....|+.++++.+++.+. .+.+++++||. +....++.+++.+.+.+
T Consensus 77 ~~~--~~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 77 TVV--DGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp EEE--ECCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred EEE--CCCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 443 234688999999988874 46799999994 44456888888876654
No 47
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.58 E-value=2.7e-14 Score=127.49 Aligned_cols=107 Identities=20% Similarity=0.281 Sum_probs=70.8
Q ss_pred cCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-CeEECCCCEECCCcEE-------
Q 012817 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI------- 412 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i------- 412 (456)
+.+++.|++++.|++++.|++++.||++|.|++++.|.+ +.||++|.|++++.|. ++.|++++.||.++.+
T Consensus 12 I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~ 91 (192)
T 3mqg_A 12 VDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPR 91 (192)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCB
T ss_pred ECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCc
Confidence 334444444444444445555555555555555555553 5666666666666664 5556666666666555
Q ss_pred ---------cCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 413 ---------QGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 413 ---------~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
..++|+++|.||.+++|. +++||++++|++++.+..
T Consensus 92 ~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~ 137 (192)
T 3mqg_A 92 AAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNK 137 (192)
T ss_dssp TTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECc
Confidence 348999999999999875 899999999999988764
No 48
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.58 E-value=2.1e-14 Score=127.60 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=85.8
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee----eEECCCCEECCCcEE------------eCeEECCCCEEC
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKV------------VNSVVMNHVTIG 407 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~----s~Ig~~~~ig~~~~i------------~~s~i~~~~~ig 407 (456)
....+++++.|++++.+++++.||++|.|++++.|.. +.||++|.|++++.| .+++|+++|.||
T Consensus 14 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig 93 (187)
T 3r3r_A 14 LFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVG 93 (187)
T ss_dssp BCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEEC
T ss_pred cCcccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEEC
Confidence 4555666667777777777777777777777777763 499999999999999 578999999999
Q ss_pred CCcEEcCeEECCCCEECCCcEe-cCeEECCCCEECCCcEEcC
Q 012817 408 DGCSIQGSVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 408 ~~~~i~~~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~ 448 (456)
+++.|.+++||++|.||++++| .++.||++++|++++.+..
T Consensus 94 ~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~ 135 (187)
T 3r3r_A 94 HKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQ 135 (187)
T ss_dssp TTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECT
T ss_pred CCCEEeCcEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 9999999999999999999988 4688888888888877764
No 49
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.58 E-value=3e-14 Score=124.96 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=81.7
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee----eEECCCCEECCCcEEe-----CeEECCCCEECCCcEEcC
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSIQG 414 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~----s~Ig~~~~ig~~~~i~-----~s~i~~~~~ig~~~~i~~ 414 (456)
....+++++.|++++.+.+++.||++|.|++++.|.. +.||++|.|++++.|. +++|+++|.|++++.|.+
T Consensus 9 ~~~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~ 88 (173)
T 1v3w_A 9 KKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHG 88 (173)
T ss_dssp BCCEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEES
T ss_pred CCCEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECC
Confidence 4455666666777777766777777777777777764 7889999999998887 478899999998888888
Q ss_pred eEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 415 SVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++|+++|.|+.++.|. +++||++++|++++.+..
T Consensus 89 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~ 123 (173)
T 1v3w_A 89 AKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPP 123 (173)
T ss_dssp CEECSSEEECTTCEECTTCEECSSEEECTTCEECT
T ss_pred CEECCCCEECCCCEEeCCCEECCCCEECCCCEECC
Confidence 8888888888888764 677777777777777653
No 50
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.58 E-value=8.1e-15 Score=131.25 Aligned_cols=112 Identities=27% Similarity=0.390 Sum_probs=86.5
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++++|++++.. +.+.+++.+ .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~--~~~~~~~~~-----~~~~ 70 (197)
T 2wee_A 4 TQITGVVLAAGRSNRL------GTPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAA--SAVRAAMAL-----DGTD 70 (197)
T ss_dssp SEEEEEEEECCCCTTT------SSCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTH--HHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCcccC------CCCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCH--HHHHHHhcc-----CCCE
Confidence 4578999999999999 38999999999999999999999999999999997542 345554432 2345
Q ss_pred EEEccC-CcChHHHHHHHHhcCC--CCcEEEEcCCc--ccCCChhHHHHH
Q 012817 81 VATVPE-DVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAA 125 (456)
Q Consensus 81 ~~~~~~-~~gt~~al~~~~~~l~--~~~~lv~~~D~--i~~~~l~~~l~~ 125 (456)
++..+. ..|++++++.+++.+. .+.+++++||. +....++.+++.
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 71 VVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred EEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 554332 3689999999998873 45699999995 445678888876
No 51
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.57 E-value=2.6e-14 Score=129.75 Aligned_cols=84 Identities=14% Similarity=0.219 Sum_probs=49.2
Q ss_pred CEECCCCEECCCCeEee---------------eEECCCCEECCCcEEeC-eEECCCCEECCCcEEcCeEECCCCEECCCc
Q 012817 364 CMLGEGSQMGDKCSVKR---------------SVIGRHCRIGSNVKVVN-SVVMNHVTIGDGCSIQGSVICSNAQLQERV 427 (456)
Q Consensus 364 ~~i~~~~~I~~~~~i~~---------------s~Ig~~~~ig~~~~i~~-s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~ 427 (456)
+.||++|.|+++|.|.. ++||++|.|++++.|.+ ++|+++|.||.++.|.+++|+++|.|++++
T Consensus 80 v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags 159 (213)
T 3kwd_A 80 FHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHV 159 (213)
T ss_dssp EEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSC
T ss_pred eEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCC
Confidence 34455555555555542 55666666666666653 556666666666666556666666666666
Q ss_pred EecCeEECCCCEECCCcEEc
Q 012817 428 ALKDCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 428 ~i~~~~i~~~~~v~~~~~~~ 447 (456)
+|.+++|++++.|++++.+.
T Consensus 160 ~V~~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 160 LIQDVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EEESCEECTTBEECTTCEEC
T ss_pred EECCcEeCCCCEECCCcEEc
Confidence 66556666666666655554
No 52
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.57 E-value=1.2e-14 Score=130.22 Aligned_cols=118 Identities=25% Similarity=0.370 Sum_probs=90.2
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++++|++++.. +.+.+++.+ .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~--~~~~~~~~~-----~~~~ 70 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRL------GTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAA--DEVLEKVEL-----DGLD 70 (199)
T ss_dssp CCEEEEEEESSCCTTT------TSCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTH--HHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCCCCC------CCCEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCH--HHHHHHhcc-----CCCE
Confidence 4578999999999999 37999999999999999999999999999999997542 345544432 2344
Q ss_pred EEEcc-CCcChHHHHHHHHhcC--CCCcEEEEcCCc--ccCCChhHHHHHHHhcCceE
Q 012817 81 VATVP-EDVGTAGALRAIAHHL--TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (456)
Q Consensus 81 ~~~~~-~~~gt~~al~~~~~~l--~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~ 133 (456)
++..+ ...|++++++.+++.+ ..+.+++++||. +...+++.+++. +.++++
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~ 126 (199)
T 2waw_A 71 IVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG--GRGATI 126 (199)
T ss_dssp EEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSE
T ss_pred EEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCE
Confidence 54433 2468889999998887 446799999995 456678888887 344443
No 53
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.56 E-value=9.4e-14 Score=127.91 Aligned_cols=119 Identities=20% Similarity=0.235 Sum_probs=86.0
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
.+.|||||||.|+|| ....||+|+|++|+|||+|+++.+.+++ +++++|++++... +.+.+++. + ...+.
T Consensus 13 ~~~aiILAaG~s~Rm----~~~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~-~~~~~~~~--~--~~~~~ 83 (234)
T 1vpa_A 13 MNVAILLAAGKGERM----SENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWF-EVVEKRVF--H--EKVLG 83 (234)
T ss_dssp CEEEEEEECCCCGGG----CCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGH-HHHHTTCC--C--TTEEE
T ss_pred cCeEEEEcCcchhhc----CCCCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHH-HHHHHHhc--c--CCceE
Confidence 478999999999999 4457999999999999999999999998 8999999985431 12233322 1 11122
Q ss_pred EEEccCCcChHHHHHHHHhcCC---CCcEEEEcCC--cccCCChhHHHHHHHhcCc
Q 012817 81 VATVPEDVGTAGALRAIAHHLT---AKDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~---~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a 131 (456)
......+..++++.+++.+. .+.+++++|| ++....++.+++.+.+.++
T Consensus 84 --~~~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 137 (234)
T 1vpa_A 84 --IVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA 137 (234)
T ss_dssp --EEECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE
T ss_pred --EeCCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 22333457788888876652 3457888899 4556679999998876544
No 54
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.56 E-value=3.5e-13 Score=123.49 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=88.3
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCC-CCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~g-i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
+.+||||||.|+|| ....||+|+|++|||||+|+++.+.+++ +++++|++++.. .+.+++++.. .+.+
T Consensus 8 ~~aIIlAaG~g~Rm----g~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~-~~~~~~~~~~------~v~~ 76 (231)
T 3q80_A 8 VVAIVPAAGSGERL----AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADR-TDEARQILGH------RAMI 76 (231)
T ss_dssp EEEEEECCCCCTTT----CSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGG-HHHHHHHHGG------GCEE
T ss_pred eEEEEECCCCCccC----CCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHH-HHHHHHHhcC------CeEE
Confidence 57999999999999 5668999999999999999999999875 899999998553 2344443322 2444
Q ss_pred EEccCCcChHHHHHHHHhcCCC----CcEEEEcCC--cccCCChhHHHHHHHh
Q 012817 82 ATVPEDVGTAGALRAIAHHLTA----KDVLVVSGD--LVSDVPPGAVTAAHRR 128 (456)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~l~~----~~~lv~~~D--~i~~~~l~~~l~~~~~ 128 (456)
+ ....+..++++.+++.+.+ +.++++.|| ++....++.+++.+.+
T Consensus 77 v--~gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 77 V--AGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp E--ECCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred E--cCCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 4 3445667899999888753 468999999 6667789999998876
No 55
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.56 E-value=5e-14 Score=127.85 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=86.7
Q ss_pred CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-----eeEECCCCEECCCcEEeC---------------eEECCCC
Q 012817 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVN---------------SVVMNHV 404 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-----~s~Ig~~~~ig~~~~i~~---------------s~i~~~~ 404 (456)
...+++++.|++++.+++++.||++|.|+++|.|. +++||++|.|+++|.|.. ++|+++|
T Consensus 39 ~~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v 118 (213)
T 3kwd_A 39 EPEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNV 118 (213)
T ss_dssp CCEECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTC
T ss_pred CCcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCc
Confidence 34555666666666666667777777777777774 379999999999999974 8899999
Q ss_pred EECCCcEEcC-eEECCCCEECCCcEecCeEECCCCEECCCcEEcCC
Q 012817 405 TIGDGCSIQG-SVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 405 ~ig~~~~i~~-~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~~~~~~ 449 (456)
.||.++.|.+ ++||++|.||++++|.+++||++++|++++.+.+.
T Consensus 119 ~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~~ 164 (213)
T 3kwd_A 119 SITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQDV 164 (213)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEESC
T ss_pred EECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEECCc
Confidence 9999999985 99999999999999988999999999999998543
No 56
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.56 E-value=5.5e-14 Score=141.52 Aligned_cols=192 Identities=13% Similarity=0.144 Sum_probs=127.1
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccC-CcchHHHHHHHHHHC----CCC-EEEEEecCchhhHHHHhhhhhhccC
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~-gkpli~~~l~~l~~~----gi~-~v~iv~~~~~~~~~i~~~~~~~~~~ 75 (456)
++.+||||||.|+|| ....||+|+|++ |||||+|+++++... |+. .++|+++.+. .+.+++++.+....
T Consensus 92 k~avViLAGG~GTRm----gs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t-~e~t~~~~~~~~~f 166 (488)
T 2i5k_A 92 KLAVLKLNGGLGTSM----GCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNT-DKDTEHLIKKYSAN 166 (488)
T ss_dssp GEEEEEECCCBSGGG----TCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTT-HHHHHHHHGGGCSS
T ss_pred CceEEEEcCCCcccC----CCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCC-HHHHHHHHHhcccc
Confidence 456799999999999 678999999999 999999999998776 533 3566665332 35677777653222
Q ss_pred ccceEEEEcc------------------------CCcChHHHHHHH-----HhcC---CCCcEEEEcCCcccC-CChhHH
Q 012817 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPPGAV 122 (456)
Q Consensus 76 ~~~i~~~~~~------------------------~~~gt~~al~~~-----~~~l---~~~~~lv~~~D~i~~-~~l~~~ 122 (456)
..++.++.|. .+.|+++++... ++.+ ..++++|+++|.+.. .++. +
T Consensus 167 g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~ 245 (488)
T 2i5k_A 167 RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-I 245 (488)
T ss_dssp SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-H
T ss_pred CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-H
Confidence 2345555444 457999988743 3333 357899999997665 5775 6
Q ss_pred HHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecCCCc-EEEEeecccccccccccchHHHhhccee
Q 012817 123 TAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRKSILRAVGQM 201 (456)
Q Consensus 123 l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~-~l~~~~~~~~~~k~~~~~~~~~~~~~~~ 201 (456)
+.+|.+.++++++.+.+.. +| ...||.+..+ +++ .++.+.+.++.+. .. +...
T Consensus 246 L~~~~~~~a~~t~~v~~~~--~p--------------~~~yG~Iv~~-dG~~~iVE~~e~~~e~~-----~~-~~~~--- 299 (488)
T 2i5k_A 246 LNHMIETGAEYIMELTDKT--RA--------------DVKGGTLISY-DGQVRLLEVAQVPKEHI-----DE-FKNI--- 299 (488)
T ss_dssp HHHHHHSCCSEEEEEEECC--GG--------------GSSSCEEEEE-TTEEEEECGGGSCTTSH-----HH-HTCT---
T ss_pred HHHHHhcCCcEEEEEEEec--CC--------------CCceeEEEEE-CCcEEEEEeccCCHHHH-----hh-cccc---
Confidence 6889899999998877643 21 1248887665 344 2333322221110 00 0000
Q ss_pred EEecCCccceEEeechHHHHHHHhc
Q 012817 202 DIRADLMDAHMYAFNRSVLQEVLDQ 226 (456)
Q Consensus 202 ~~~~~~~~~giYi~~~~vl~~~~~~ 226 (456)
......|+|+|+|+.+.|..++.+
T Consensus 300 -~~~~~~Ntgi~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 300 -RKFTNFNTNNLWINLKAVKRLIES 323 (488)
T ss_dssp -TTCCEEEEEEEEEEHHHHHHHHHT
T ss_pred -cccCEEEEEEEEEeHHHHHHHHhh
Confidence 123456999999999999888764
No 57
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.55 E-value=6.1e-14 Score=124.80 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=82.5
Q ss_pred CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe----eeEECCCCEECCCcEEeCe------------EECCCCEECC
Q 012817 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVVNS------------VVMNHVTIGD 408 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i~~s------------~i~~~~~ig~ 408 (456)
...+++++.|++++.|++++.||++|.|++++.|. +..||++|.|++++.|..+ +|+++|.||+
T Consensus 19 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~ 98 (189)
T 3r1w_A 19 SPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGH 98 (189)
T ss_dssp CCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECT
T ss_pred CCEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECC
Confidence 44566666666666676777777777777777775 3599999999999999765 8999999999
Q ss_pred CcEEcCeEECCCCEECCCcEe-cCeEECCCCEECCCcEEcC
Q 012817 409 GCSIQGSVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 409 ~~~i~~~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~ 448 (456)
+|.|.+++||++|.||++++| .++.||++++|++++.+..
T Consensus 99 ~~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~ 139 (189)
T 3r1w_A 99 QAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSP 139 (189)
T ss_dssp TCEEESCEECSSEEECTTCEECTTCEECSSCEECTTCEECT
T ss_pred CCEEeCcEECCCcEECCCCEEcCCCEECCCCEEccCCEECC
Confidence 999999999999999999987 4777777777777777664
No 58
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.55 E-value=3.3e-14 Score=141.88 Aligned_cols=116 Identities=22% Similarity=0.301 Sum_probs=100.2
Q ss_pred cccCCCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEc
Q 012817 334 NHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ 413 (456)
Q Consensus 334 ~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~ 413 (456)
..+.....+.++..|++++.|++++.|++++.||++|.|+++|.|++++|++++.|++++.|.+++|+++|.||.++.|.
T Consensus 251 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 251 AEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIA 330 (401)
T ss_dssp CEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEEC
T ss_pred CEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEc
Confidence 33333334456677788888888888888888999999999999989999999999999999999999999999999997
Q ss_pred -------------------------CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcCC
Q 012817 414 -------------------------GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 414 -------------------------~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~ 449 (456)
+++||++|.||++++|. ++.||++++|++++.+...
T Consensus 331 ~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~~ 392 (401)
T 2ggo_A 331 NLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNRD 392 (401)
T ss_dssp CSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCCCeEccc
Confidence 78999999999999875 8999999999999988764
No 59
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.54 E-value=1.6e-14 Score=130.28 Aligned_cols=103 Identities=13% Similarity=0.218 Sum_probs=79.8
Q ss_pred eeCCCCEeCCCcEECC--CCEECCCCEECCCCeEe-eeEECCCCEECCCcEEe----CeEECCCCEECCCcEE-------
Q 012817 347 IIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV----NSVVMNHVTIGDGCSI------- 412 (456)
Q Consensus 347 ~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~----~s~i~~~~~ig~~~~i------- 412 (456)
.+++++.|++++.|.. ++.||++|.|+++|.|. ++.||++|.|++++.|. +++|+++|.||++|.|
T Consensus 34 ~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~ 113 (205)
T 3vbi_A 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDF 113 (205)
T ss_dssp EECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCC
T ss_pred EECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCc
Confidence 4445555555555544 56666667777777766 58999999999999993 4889999999999998
Q ss_pred -------------------cCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcCC
Q 012817 413 -------------------QGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 413 -------------------~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~ 449 (456)
++++||++|.||++++|. ++.||++++|++++.+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~ 170 (205)
T 3vbi_A 114 SGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKES 170 (205)
T ss_dssp SSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSC
T ss_pred ccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCc
Confidence 468999999999999875 8899999999998887653
No 60
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.54 E-value=8.6e-14 Score=129.18 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=50.4
Q ss_pred eEECCCCEECCCcEEeC-eEECCCCEECCCcEEcCeEECCCCEECCCcEecCeEECCCCEECCCcEEcCC
Q 012817 381 SVIGRHCRIGSNVKVVN-SVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i~~-s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~~~~~~ 449 (456)
++||++|.||++|.|.+ ++|+++|.||.++.|.++.|+++|.|+++++|.++.|+++++|++++.+.+.
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV~~~~I~~~~~v~~g~vv~~~ 210 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAAIGVTIPDGRYIPAGMVVTSQ 210 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEEESCEECTTBEECTTCEECSH
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEECCeEeCCCCEECCCCEEecC
Confidence 67777777777777775 7777777777777775577777777777777766777777777777766543
No 61
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.53 E-value=1.5e-13 Score=126.70 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=78.9
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+||. .. ||+|+|++|+|||+|+++. ..++++++|+++. . +.+ +.. ..+.
T Consensus 24 M~~~aiILAgG~s~Rm~----~~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~-~----~~~-~~~-----~~v~ 85 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLG----RG-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP-G----AEP-PKG-----LGAV 85 (236)
T ss_dssp CCCEEEEECCC-----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT-T----CCC-CTT-----CSCE
T ss_pred CceEEEEEcCCCCccCC----CC-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH-H----HHH-hhc-----CCcE
Confidence 55669999999999994 34 9999999999999999999 6789999999984 1 111 111 1244
Q ss_pred EEEccCCcChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhHHHHHHHhcCce
Q 012817 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAV 132 (456)
Q Consensus 81 ~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~ 132 (456)
++ .+..++..+++.+++.+..+.+++++||. +....++.+++.+.+.++.
T Consensus 86 ~~--~~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~ 137 (236)
T 2px7_A 86 FL--EGGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSGAA 137 (236)
T ss_dssp EE--ECCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHSEE
T ss_pred EE--eCCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 43 33457889999998887656699999993 4455789999988765543
No 62
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.53 E-value=1.8e-13 Score=129.18 Aligned_cols=115 Identities=11% Similarity=0.191 Sum_probs=83.2
Q ss_pred cccCCCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee---------------eEECCCCEECCCcEEe-C
Q 012817 334 NHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR---------------SVIGRHCRIGSNVKVV-N 397 (456)
Q Consensus 334 ~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~---------------s~Ig~~~~ig~~~~i~-~ 397 (456)
..+.....+++++.|++++.|++++.|++++.||++|.|+++|.|++ ++||++|.|++++.|. +
T Consensus 9 ~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~ 88 (273)
T 3fs8_A 9 AIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGD 88 (273)
T ss_dssp CEECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESS
T ss_pred eEECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCC
Confidence 33444444555666666666666677777777777777777777764 7888888888888886 8
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++|++++.||.++.|. +++|++++.|+.++.+. +++||+++.|++++.+..
T Consensus 89 ~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~ 141 (273)
T 3fs8_A 89 TIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGE 141 (273)
T ss_dssp CEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECT
T ss_pred CEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECC
Confidence 8888888888888885 88888888888887774 566666666666665553
No 63
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.53 E-value=2.5e-13 Score=133.20 Aligned_cols=15 Identities=7% Similarity=0.246 Sum_probs=6.7
Q ss_pred eEECCCCEECCCcEe
Q 012817 415 SVICSNAQLQERVAL 429 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i 429 (456)
++|+++|.||++++|
T Consensus 223 v~IGd~v~IGa~~~I 237 (372)
T 3pmo_A 223 VTIGDDVEIGANTTI 237 (372)
T ss_dssp EEECSSCEECTTCEE
T ss_pred eEECCCCEECCCcEE
Confidence 444444444444443
No 64
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.53 E-value=1.8e-13 Score=128.26 Aligned_cols=50 Identities=30% Similarity=0.482 Sum_probs=20.9
Q ss_pred ceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEE
Q 012817 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV 395 (456)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i 395 (456)
+.+++++.|++++.|++++.||++|.|++++.|. ++.||++|.|++++.|
T Consensus 18 a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 68 (262)
T 2qia_A 18 ASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASI 68 (262)
T ss_dssp CEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEE
Confidence 3333333333333333334444444444444443 3444444444444444
No 65
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.53 E-value=1.5e-13 Score=130.20 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=35.0
Q ss_pred eeEECCCCEECCCcEEeC--------eEECCCCEECCCcEE-cCeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 380 RSVIGRHCRIGSNVKVVN--------SVVMNHVTIGDGCSI-QGSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 380 ~s~Ig~~~~ig~~~~i~~--------s~i~~~~~ig~~~~i-~~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+++||++|.|+++|.|.. ++|+++|.|+.++.| .+|+|++++.|+.++.+. +++||++++|++++.+..
T Consensus 100 ~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~ 178 (283)
T 4eqy_A 100 RLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQ 178 (283)
T ss_dssp EEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eEEECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcC
Confidence 345555555555555543 455555555555555 245555555555555443 244555554444444443
No 66
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.53 E-value=2.4e-13 Score=127.61 Aligned_cols=113 Identities=16% Similarity=0.234 Sum_probs=63.1
Q ss_pred cCCCcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeE--------------eeeEECCCCEECCCcEEeC----
Q 012817 336 LSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV--------------KRSVIGRHCRIGSNVKVVN---- 397 (456)
Q Consensus 336 ~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i--------------~~s~Ig~~~~ig~~~~i~~---- 397 (456)
+..+.++.+++.|++++.|++++.|.+++.||++|.|++++.| .++.||++|.|++++.|..
T Consensus 25 I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~ 104 (266)
T 3r0s_A 25 IEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAK 104 (266)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTT
T ss_pred ECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCccc
Confidence 3333344444555555555555555556666666666666666 3567777777777777753
Q ss_pred ----eEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 398 ----SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 398 ----s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++|+++|.|+.++.+. +|.|++++.|+.++.+. +++||++++|++++.+..
T Consensus 105 ~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~ 161 (266)
T 3r0s_A 105 GDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQ 161 (266)
T ss_dssp TTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECC
Confidence 5566666666555553 55555555555555543 244555554444444433
No 67
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.53 E-value=2.2e-13 Score=127.81 Aligned_cols=109 Identities=17% Similarity=0.278 Sum_probs=71.4
Q ss_pred cCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEE--------------eCeEECCCCEE
Q 012817 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV--------------VNSVVMNHVTI 406 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i--------------~~s~i~~~~~i 406 (456)
+++.+.|++++.|++.+.|++++.||++|.|++++.|. ++.||++|.|++++.| .++.|+++|.|
T Consensus 13 I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~I 92 (266)
T 3r0s_A 13 IEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATI 92 (266)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEE
Confidence 33444445555555555555555555666666666665 4777777777777777 46677888888
Q ss_pred CCCcEEcC--------eEECCCCEECCCcEe-cCeEECCCCEECCCcEEcCCe
Q 012817 407 GDGCSIQG--------SVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKGES 450 (456)
Q Consensus 407 g~~~~i~~--------~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~~~ 450 (456)
++++.|.. ++||+++.|++++.+ ++|.||+++.+++++.+.+..
T Consensus 93 g~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v 145 (266)
T 3r0s_A 93 REFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHV 145 (266)
T ss_dssp CTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTC
T ss_pred CCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCe
Confidence 88877752 777777777777776 467777777776666665533
No 68
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.52 E-value=3.4e-13 Score=131.68 Aligned_cols=66 Identities=23% Similarity=0.494 Sum_probs=28.6
Q ss_pred eeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEEe-CeEECCCCEECCCcEE
Q 012817 347 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI 412 (456)
Q Consensus 347 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i 412 (456)
.+++++.|++++.|++++.||++|.|+++|.|. ++.||++|.|++++.|. +++|+++|.|+.++.|
T Consensus 116 ~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 116 VISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 333333333333333333344444444444443 34444444444444443 4445555555554444
No 69
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.52 E-value=2.7e-13 Score=121.02 Aligned_cols=120 Identities=13% Similarity=0.143 Sum_probs=75.3
Q ss_pred ccCHHHHHHHhHhhhccccccCCCcccCCCceeCCCCEeCCCcEEC--CCCEECCCCEECCCCeEeeeEECCCCEECCCc
Q 012817 316 LNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNV 393 (456)
Q Consensus 316 i~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~ 393 (456)
++++..+++....+...... ....++|++.+++++.|+ +++.|+++|.|++++ .||++|.|++++
T Consensus 54 ig~~~~r~~~~~~l~~~~~~--------~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~-----~IG~~~~I~~~~ 120 (194)
T 3bfp_A 54 IGNNEIRKKIYQKISENGFK--------IVNLIHKSALISPSAIVEENAGILIMPYVVINAKA-----KIEKGVILNTSS 120 (194)
T ss_dssp CCCHHHHHHHHHHHHTTTCC--------BCCEECTTCEECTTCEECTTSCCEECTTCEECTTC-----EECTTCEECTTC
T ss_pred eCCHHHHHHHHHHHHHcCCc--------cccccCCeEEECCCceeCCCCCcEEcCCCEECCCC-----EECCCCEECCCC
Confidence 45555555555444432211 234566666666666666 666666666665544 666777777777
Q ss_pred EEe-CeEECCCCEECCCcEEc-CeEECCCCEECCCcEe-cCeEECCCCEECCCcEEcC
Q 012817 394 KVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVAL-KDCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 394 ~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~~~ 448 (456)
.|. +|.|+++|.|+.++.|. +++|+++|.|+.+++| .+++||++++|++++.+..
T Consensus 121 ~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~ 178 (194)
T 3bfp_A 121 VIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVK 178 (194)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEEcc
Confidence 766 67777777777777775 4777777777777765 3677777777777776543
No 70
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.52 E-value=4.1e-13 Score=130.49 Aligned_cols=69 Identities=20% Similarity=0.355 Sum_probs=31.7
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEEe-CeEECCCCEECCCcEE
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI 412 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i 412 (456)
+.+.+++++.|++++.|++++.||++|.|+++|.|+ ++.||++|.|++++.|. ++.|+++|.|+.++.|
T Consensus 108 ~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 108 ATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEE
T ss_pred CCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEE
Confidence 333333444444444444444444444444444442 34445555555555553 4555555555555554
No 71
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.52 E-value=2.6e-13 Score=127.50 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=20.6
Q ss_pred ceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEE
Q 012817 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV 395 (456)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i 395 (456)
+.|++++.|++++.|++++.||++|.|+++|.|. ++.||++|.|++++.|
T Consensus 14 a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 14 AEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp SEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEE
Confidence 3333333333333333344444444444444443 3444444444444444
No 72
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.52 E-value=1.7e-13 Score=127.14 Aligned_cols=104 Identities=13% Similarity=0.269 Sum_probs=88.9
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-----eEECCCCEECCCcEEe----------------------
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-----SVIGRHCRIGSNVKVV---------------------- 396 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-----s~Ig~~~~ig~~~~i~---------------------- 396 (456)
....+++++.|++++.|.+++.||++|.|+++|.|.. .+||++|.|+++|.|.
T Consensus 58 ~~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~ 137 (247)
T 1qre_A 58 SAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGK 137 (247)
T ss_dssp CCCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTE
T ss_pred CCcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCc
Confidence 4556777777777777777788888888888888764 3899999999999997
Q ss_pred --CeEECCCCEECCCcEEcC-eEECCCCEECCCcEecCeEECCCCEECCCcEEc
Q 012817 397 --NSVVMNHVTIGDGCSIQG-SVICSNAQLQERVALKDCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 397 --~s~i~~~~~ig~~~~i~~-~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~~~~ 447 (456)
+++|+++|.||++|.|.+ ++|+++|.||++++|.++.||++++|++++.+.
T Consensus 138 ~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV~ 191 (247)
T 1qre_A 138 EYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAAI 191 (247)
T ss_dssp EESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEEE
T ss_pred cCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEEC
Confidence 378999999999999986 999999999999988669999999999998883
No 73
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.52 E-value=2.4e-13 Score=127.67 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=50.2
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeE-------------eeeEECCCCEECCCcEEe--------CeEECC
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-------------KRSVIGRHCRIGSNVKVV--------NSVVMN 402 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i-------------~~s~Ig~~~~ig~~~~i~--------~s~i~~ 402 (456)
+++.|++++.|++++.|++++.||++|.|++++.| .++.||++|.|++++.|. +++|++
T Consensus 36 ~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~ 115 (265)
T 4e6u_A 36 PQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGS 115 (265)
T ss_dssp TTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECS
T ss_pred CCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceEEcc
Confidence 33333444444444444444445555555555555 245666666666666664 244555
Q ss_pred CCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEc
Q 012817 403 HVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 403 ~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
+|.|+.++.|. +|+|++++.|+.++.+. +++||++++|++++.+.
T Consensus 116 ~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~ 162 (265)
T 4e6u_A 116 HNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIH 162 (265)
T ss_dssp SCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred CcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEEC
Confidence 55555555442 45555554444444443 24444444444444433
No 74
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.51 E-value=2.2e-13 Score=129.01 Aligned_cols=83 Identities=12% Similarity=0.199 Sum_probs=56.6
Q ss_pred ECCCCEECCCCeEee--------eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEE
Q 012817 366 LGEGSQMGDKCSVKR--------SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQV 434 (456)
Q Consensus 366 i~~~~~I~~~~~i~~--------s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i 434 (456)
||++|.|+++|.|.+ +.||++|.|+.++.|. +|+|+++|.|+.++.+. ++.|+++|.||.+++|. ++.|
T Consensus 103 IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~I 182 (283)
T 4eqy_A 103 IGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRI 182 (283)
T ss_dssp ECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEE
Confidence 355555556666653 6777777777777774 67777777777777775 57777777777777664 6777
Q ss_pred CCCCEECCCcEEcC
Q 012817 435 GQGYVVSAGCEYKG 448 (456)
Q Consensus 435 ~~~~~v~~~~~~~~ 448 (456)
|++++|++++.+..
T Consensus 183 g~~~vvg~~s~V~~ 196 (283)
T 4eqy_A 183 GAHSMLGGASALVQ 196 (283)
T ss_dssp CTTCEECTTCEECS
T ss_pred CCCcEECCCCeEec
Confidence 77777777766654
No 75
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.51 E-value=3.3e-13 Score=126.17 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=23.7
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEc
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
|.|++++.++.++.+. ++.|+++|.||.+++|. ++.||++++|++++.+.
T Consensus 122 ~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~s~V~ 173 (259)
T 3hsq_A 122 CILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLAKVV 173 (259)
T ss_dssp CEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSSEEEC
T ss_pred cEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCCCEEc
Confidence 3333333333333332 34455555555555443 45555555555555543
No 76
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.50 E-value=1.2e-13 Score=138.94 Aligned_cols=102 Identities=14% Similarity=0.179 Sum_probs=85.3
Q ss_pred ceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEcCeEECCCCEECC
Q 012817 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQE 425 (456)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~ 425 (456)
..+++++.|++++.+.+++.||++|.|+++|.|++++||++|.|+++|+|.+|+|+++|.||+++.|.+++||++|.||+
T Consensus 274 ~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~ 353 (496)
T 3c8v_A 274 AGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGF 353 (496)
T ss_dssp --CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECT
T ss_pred cccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECC
Confidence 44566666666676767778888888888888888999999999999999999999999999999999999999999999
Q ss_pred CcEec-C----eEECCCCEECCCcEEc
Q 012817 426 RVALK-D----CQVGQGYVVSAGCEYK 447 (456)
Q Consensus 426 ~~~i~-~----~~i~~~~~v~~~~~~~ 447 (456)
+++|. + ++||++++|++++.+.
T Consensus 354 ~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 354 NSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp TCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred CCEEeCCCCcceEECCCCEECCCCEEe
Confidence 99886 4 5899999999988887
No 77
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.50 E-value=3.8e-13 Score=126.23 Aligned_cols=86 Identities=13% Similarity=0.261 Sum_probs=67.1
Q ss_pred CCEECCCCEECCCCeEe--------eeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-C
Q 012817 363 HCMLGEGSQMGDKCSVK--------RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-D 431 (456)
Q Consensus 363 ~~~i~~~~~I~~~~~i~--------~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~ 431 (456)
++.||++|.|++++.|. ++.||++|.|+.++.|. +++|+++|.|+.++.+. +++|+++|.||.+++|. +
T Consensus 85 ~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 164 (265)
T 4e6u_A 85 WLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQF 164 (265)
T ss_dssp EEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred eEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCC
Confidence 44556677777777776 47888888888888885 78888888888888886 58888888888888764 6
Q ss_pred eEECCCCEECCCcEEcC
Q 012817 432 CQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 432 ~~i~~~~~v~~~~~~~~ 448 (456)
+.||++++|++++.+..
T Consensus 165 v~Ig~~~~i~~~svV~~ 181 (265)
T 4e6u_A 165 CKIDSYSMIGGASLILK 181 (265)
T ss_dssp CEECTTCEECTTCEECS
T ss_pred cEECCCCEEcCCCEEcc
Confidence 88888888888887754
No 78
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.50 E-value=4.5e-14 Score=126.56 Aligned_cols=114 Identities=19% Similarity=0.270 Sum_probs=86.1
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++|++++.. +.+.+++. .++
T Consensus 1 M~~~~iIlAgG~g~Rm----g--~~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~--~~~~~~~~------~~~- 62 (197)
T 3d5n_A 1 MNIGVIILAAGEGKRF----G--GDKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYV--NEMLPLLM------DQI- 62 (197)
T ss_dssp CCEEEEEECSCCTTCC----C--SSGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTH--HHHGGGCT------TSC-
T ss_pred CceEEEEECCcCcccC----C--CCeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCH--HHHHHHhc------CCE-
Confidence 8899999999999999 2 499999999999999999999876 8888887542 34544432 124
Q ss_pred EEEccC-CcChHHHHHHHHhcCCC-CcEEEEcCCc--ccCCChhHHHHHHHhcCceE
Q 012817 81 VATVPE-DVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (456)
Q Consensus 81 ~~~~~~-~~gt~~al~~~~~~l~~-~~~lv~~~D~--i~~~~l~~~l~~~~~~~a~~ 133 (456)
++..+. ..|+.++++.+++.+.+ +.+++++||. +....++.+++.+ +.++++
T Consensus 63 ~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 63 VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 443333 36999999999888864 5799999995 4455688888876 444443
No 79
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.50 E-value=6.1e-13 Score=124.42 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=62.6
Q ss_pred CcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeE-------------e-eeEECCCCEECCCcEEe-------C
Q 012817 339 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-------------K-RSVIGRHCRIGSNVKVV-------N 397 (456)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i-------------~-~s~Ig~~~~ig~~~~i~-------~ 397 (456)
+..+.++..|++++.|++++.|.+++.||++|.|++++.| . ++.||++|.|++++.|. .
T Consensus 24 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~ 103 (259)
T 3hsq_A 24 YSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSP 103 (259)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBC
T ss_pred CCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCc
Confidence 3333444444444455555555555555666666666666 2 36677777777777776 4
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcCC
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~ 449 (456)
+.|++++.|+.++.|. +|+|++++.|+.++.+. +++||++++|++++.+...
T Consensus 104 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 157 (259)
T 3hsq_A 104 TVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQF 157 (259)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTT
T ss_pred EEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCC
Confidence 5566666666666554 56666665555555553 4555555555555554443
No 80
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.49 E-value=2.6e-14 Score=137.23 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=98.3
Q ss_pred hhcccCHHHHHHHhHhhhccc------cccCCCcccCC-CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECC
Q 012817 313 CVRLNSIQAFMDINRDVIGEA------NHLSGYNFSAQ-NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGR 385 (456)
Q Consensus 313 ~~~i~~~~~y~~~~~~~l~~~------~~~~~~~~~~~-~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~ 385 (456)
..|+..+++|-++....+... .......++.. .+.+++++.|++++.|++++.|+++|.|+++|.|.+|.|++
T Consensus 26 l~ri~al~~f~~v~~g~lgg~i~~e~nl~~~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~ 105 (334)
T 2pig_A 26 LRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISD 105 (334)
T ss_dssp EEEEEESSCBTTBCTTCEEEEESSTTSBCSSSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEES
T ss_pred EEEEEEeeccccccCCccCCeEeccCCcccCCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcC
Confidence 456777777766666654432 12233446666 77778888888999999999999999999999999999999
Q ss_pred CCEECCCcEEeCeEECCCCEECCCc----------------------------EEcCeEECCCCEECCCcEecCeEECCC
Q 012817 386 HCRIGSNVKVVNSVVMNHVTIGDGC----------------------------SIQGSVICSNAQLQERVALKDCQVGQG 437 (456)
Q Consensus 386 ~~~ig~~~~i~~s~i~~~~~ig~~~----------------------------~i~~~ii~~~~~I~~~~~i~~~~i~~~ 437 (456)
++.|+++++|.+|+|+++|.|+.++ +|.+++|+.+|.|+.++.|.+++|+.+
T Consensus 106 ~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~~svI~~~ 185 (334)
T 2pig_A 106 GARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATITHAFIEHR 185 (334)
T ss_dssp SCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEESEEECTT
T ss_pred CCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEeCcEEcCC
Confidence 9999999999887766655544444 444455666666666666666677777
Q ss_pred CEECCCcEEcCC
Q 012817 438 YVVSAGCEYKGE 449 (456)
Q Consensus 438 ~~v~~~~~~~~~ 449 (456)
+.|++++.+.+.
T Consensus 186 a~I~~~a~V~~~ 197 (334)
T 2pig_A 186 AEVFDFALIEGD 197 (334)
T ss_dssp CEECTTCEEECC
T ss_pred CEECCCcEECCc
Confidence 777777666554
No 81
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.49 E-value=5.9e-13 Score=134.60 Aligned_cols=194 Identities=14% Similarity=0.107 Sum_probs=126.6
Q ss_pred CceEEEEecCCCCCCcCCCCCCCccccccc---CCcchHHHHHHHHHH--------CC----CCEEEEEecCchhhHHHH
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL--------SN----IKDLIVVVEGADAALRVG 66 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi---~gkpli~~~l~~l~~--------~g----i~~v~iv~~~~~~~~~i~ 66 (456)
++.+||||||.|+|| +...||+|+|+ .|+|+|++.++++.+ .| +..+++.+... .+.+.
T Consensus 102 kvavViLAGG~GTRL----g~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t--~e~t~ 175 (505)
T 1jv1_A 102 KVAVLLLAGGQGTRL----GVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRT--MESTK 175 (505)
T ss_dssp CEEEEEECCCCCCTT----SCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTT--HHHHH
T ss_pred ceEEEEEcCCccccC----CCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC--HHHHH
Confidence 578999999999999 67899999999 799999999999866 25 55555554432 34566
Q ss_pred hhhhhhccCcc---ceEEEEc---------------------cCCcChHHHHHHHHh-----cC---CCCcEEEEcCCcc
Q 012817 67 GWISAAYVDRL---HVEVATV---------------------PEDVGTAGALRAIAH-----HL---TAKDVLVVSGDLV 114 (456)
Q Consensus 67 ~~~~~~~~~~~---~i~~~~~---------------------~~~~gt~~al~~~~~-----~l---~~~~~lv~~~D~i 114 (456)
+|+.+.....+ ++.++.+ ..+.|+++.+..+.. .+ ..++++|.++|.+
T Consensus 176 ~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~ 255 (505)
T 1jv1_A 176 EFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI 255 (505)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred HHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcc
Confidence 66654211111 2444432 235788888765532 11 2478999999975
Q ss_pred -cCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecCCCc-EEEEeecccccccccccch
Q 012817 115 -SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRK 192 (456)
Q Consensus 115 -~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~-~l~~~~~~~~~~k~~~~~~ 192 (456)
...+...++.+|...++++++.+.+... .+..+|++..+ +++ .++.+.+.+. ...
T Consensus 256 L~~~~d~~~lg~~~~~~~~~~~~v~~k~~----------------~~e~~Gvl~~~-dg~~~vvEy~E~p~-----~~~- 312 (505)
T 1jv1_A 256 LVKVADPRFIGFCIQKGADCGAKVVEKTN----------------PTEPVGVVCRV-DGVYQVVEYSEISL-----ATA- 312 (505)
T ss_dssp TCCTTCHHHHHHHHHTTCSEEEEEEECCS----------------TTCSCCEEEEE-TTEEEEECGGGSCH-----HHH-
T ss_pred ccccchHHHHHHHHHcCCCEEEEEEEccC----------------CccCcceEEEE-CCeEEEEEEeeCCH-----HHh-
Confidence 7777888999999999999987765221 14568888775 343 2333332111 000
Q ss_pred HHHhhcceeEEecCCccceEEeechHHHHHHHhc
Q 012817 193 SILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (456)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~~~ 226 (456)
....+.-....+..|+|+|+|+.++|..+..+
T Consensus 313 --~~~~~~g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 313 --QKRSSDGRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp --HCBCTTSSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred --hhcccccccccceeeEEEEEecHHHHHHHHHh
Confidence 00000011234678999999999999887653
No 82
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.48 E-value=4.6e-13 Score=122.12 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=56.7
Q ss_pred ceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEECCCCEE
Q 012817 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQL 423 (456)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I 423 (456)
.+++|.+.+.+++.++++|.|++++.|++++ .||++|.|+.++.|. +|+|+++|.|+.++.|. +++|+++|.|
T Consensus 100 ~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~-----~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~I 174 (220)
T 4ea9_A 100 NAIHPSAVVSPSVRLGEGVAVMAGVAINADS-----WIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFL 174 (220)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTC-----EECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CcCCCCCEECCCCEECCCCEEcCCCEECCCC-----EECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEE
Confidence 3445555555555555555555555555443 555555555555555 55666666666666665 3666666666
Q ss_pred CCCcEec-CeEECCCCEECCCcEEc
Q 012817 424 QERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 424 ~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
|++++|. ++.||++++|++++.+.
T Consensus 175 g~~~~i~~~~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 175 GVGARVIPGVTIGADTIVGAGGVVV 199 (220)
T ss_dssp CTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCCEEcCCcEECCCCEECCCCEEc
Confidence 6666553 56666666666666654
No 83
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.47 E-value=9.9e-13 Score=129.00 Aligned_cols=12 Identities=8% Similarity=-0.092 Sum_probs=7.3
Q ss_pred cceEEeechHHH
Q 012817 209 DAHMYAFNRSVL 220 (456)
Q Consensus 209 ~~giYi~~~~vl 220 (456)
.++..+++++.+
T Consensus 77 ~a~~~i~~~~~~ 88 (372)
T 3pmo_A 77 RAGAVLLTAADA 88 (372)
T ss_dssp CCSEEEECHHHH
T ss_pred CCcEEEEcHHHH
Confidence 346777776644
No 84
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.47 E-value=3.5e-13 Score=118.08 Aligned_cols=103 Identities=13% Similarity=0.238 Sum_probs=83.9
Q ss_pred CCceeCCCCEeCCCcEECCC---CEECCCCEECCCCeEe-----eeEECCCCEECCCcEEeCeEECCCCEECCCcEEc-C
Q 012817 344 QNNIIHPSAELGSKTTVGPH---CMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-G 414 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~---~~i~~~~~I~~~~~i~-----~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~ 414 (456)
++..|++++.|++++.|..+ +.||++|.|+++|.|. +++||++|.|++++.|.+++|+++|.||.++.|. +
T Consensus 29 ~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~ 108 (173)
T 1xhd_A 29 GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDG 108 (173)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTT
T ss_pred CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCC
Confidence 34455555555555555443 6788999999999998 7999999999999999999999999999999996 7
Q ss_pred eEECCCCEECCCcEec-CeEECCCCEE-CCCcEE
Q 012817 415 SVICSNAQLQERVALK-DCQVGQGYVV-SAGCEY 446 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~-~~~i~~~~~v-~~~~~~ 446 (456)
+.|++++.|++++++. +..|++++++ |..+.+
T Consensus 109 ~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa~~ 142 (173)
T 1xhd_A 109 AEIGEGAFIGAGSLVSQGKKIPPNTLAFGRPAKV 142 (173)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEEEETTEEE
T ss_pred CEECCCCEECCCCEECCCcEeCCCCEEECCCCEE
Confidence 9999999999999886 5788888887 555543
No 85
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.47 E-value=9.1e-13 Score=126.12 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=6.3
Q ss_pred eEECCCCEECCCcEE
Q 012817 381 SVIGRHCRIGSNVKV 395 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i 395 (456)
++||++|.|++++.|
T Consensus 78 ~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 78 TFIGCNNIIGHHAVV 92 (305)
T ss_dssp EEECSSCEECTTCEE
T ss_pred eEECCceEECCccEe
Confidence 344444444444443
No 86
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.47 E-value=1e-12 Score=127.69 Aligned_cols=68 Identities=22% Similarity=0.435 Sum_probs=30.6
Q ss_pred eEECCCCEECCCcEEe-----CeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 381 SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i~-----~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++||++|.||.++.|. +++|++++.|+.++.|+ ++.|+++|.|+.++.+. +++||++++|++++.+.+
T Consensus 201 v~IGd~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~ 275 (341)
T 3eh0_A 201 VIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVING 275 (341)
T ss_dssp EEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECS
T ss_pred EEECCCcEECCccEeeccccCceEeccceEECCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECC
Confidence 4555555555555552 33344444444444442 44444444444444332 344555555554444443
No 87
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.46 E-value=1.1e-12 Score=117.00 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=15.6
Q ss_pred CEECCCcEec-CeEECCCCEECCCcEEcCCeee
Q 012817 421 AQLQERVALK-DCQVGQGYVVSAGCEYKGESLA 452 (456)
Q Consensus 421 ~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~~~~ 452 (456)
+.||+++.|. +++|.+++.|+.++.+....++
T Consensus 103 ~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV 135 (192)
T 3mqg_A 103 TIVRQGATLGANCTVVCGATIGRYAFVGAGAVV 135 (192)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCcEECCCCEECCCCEECCCCEEcCCCEE
Confidence 3444444443 4555555555555555444443
No 88
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.46 E-value=9.4e-13 Score=123.71 Aligned_cols=67 Identities=15% Similarity=0.292 Sum_probs=36.3
Q ss_pred eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEc
Q 012817 381 SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
+.||++|.|+.++.|. +|.|+++|.|+.++.+. ++.|++++.||.++.|. ++.||++++|++++.+.
T Consensus 105 ~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~s~V~ 174 (270)
T 1j2z_A 105 TLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALG 174 (270)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCceEEecCcEec
Confidence 3444444444444443 44444444444444443 45566666666666553 56777777777776653
No 89
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.46 E-value=3.3e-13 Score=118.21 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=83.1
Q ss_pred CceeCCCCEeCCCcEECCC---CEECCCCEECCCCeEe-----eeEECCCCEECCCcEEeCeEECCCCEECCCcEEc-Ce
Q 012817 345 NNIIHPSAELGSKTTVGPH---CMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-GS 415 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~---~~i~~~~~I~~~~~i~-----~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~~ 415 (456)
+..|++++.|++++.|..+ +.||++|.|+++|.|. +++||++|.|++++.|.+++|+++|.||.++.|. ++
T Consensus 28 ~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~ 107 (173)
T 1v3w_A 28 DVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGA 107 (173)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTC
T ss_pred CEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEeCCC
Confidence 4445555555555555443 6788888888898887 5899999999999999999999999999999986 89
Q ss_pred EECCCCEECCCcEec-CeEECCCCEE-CCCcEE
Q 012817 416 VICSNAQLQERVALK-DCQVGQGYVV-SAGCEY 446 (456)
Q Consensus 416 ii~~~~~I~~~~~i~-~~~i~~~~~v-~~~~~~ 446 (456)
.|++++.|++++++. ++.|++++++ |..+.+
T Consensus 108 ~Ig~~~~Ig~~s~V~~~~~i~~~~~v~G~pa~~ 140 (173)
T 1v3w_A 108 KIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKV 140 (173)
T ss_dssp EECSSEEECTTCEECTTCEECTTEEEEETTEEE
T ss_pred EECCCCEECCCCEECCCcEeCCCcEEECcCCEE
Confidence 999999999999886 5888999888 555543
No 90
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.46 E-value=1.3e-12 Score=116.63 Aligned_cols=96 Identities=23% Similarity=0.392 Sum_probs=60.1
Q ss_pred CCceeCCCCEeC--CCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEEC
Q 012817 344 QNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVIC 418 (456)
Q Consensus 344 ~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~ 418 (456)
+.+.+++++.|+ +++.|++++.|++++.||++|.|. +++|+++|.||++|.|. ++.|.++++||++|+|+ +++|.
T Consensus 80 ~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~ 159 (194)
T 3bfp_A 80 KSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL 159 (194)
T ss_dssp TTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEEC
Confidence 445555666666 666666666666666666666664 35666777777777776 56666677777777765 66666
Q ss_pred CCCEECCCcEecCeEECCCCEECCCc
Q 012817 419 SNAQLQERVALKDCQVGQGYVVSAGC 444 (456)
Q Consensus 419 ~~~~I~~~~~i~~~~i~~~~~v~~~~ 444 (456)
++++|++ +++||++++|..+.
T Consensus 160 ~~~~Ig~-----~~~Igagsvv~~~v 180 (194)
T 3bfp_A 160 PNLSLAD-----DSILGGGATLVKNQ 180 (194)
T ss_dssp TTCEECT-----TCEECTTCEECSCB
T ss_pred CCCEECC-----CCEECCCCEEcccc
Confidence 6666663 44555555555443
No 91
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.46 E-value=1.2e-12 Score=127.92 Aligned_cols=68 Identities=25% Similarity=0.495 Sum_probs=30.5
Q ss_pred eEECCCCEECCCcEE-----eCeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 381 SVIGRHCRIGSNVKV-----VNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i-----~~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++||++|.||.++.| .+++|++++.|+.++.|. ++.|+++|.|+.++.+. +++||++++|++++.+.+
T Consensus 206 v~IGd~v~IG~~~~I~~g~~~~t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~ 280 (357)
T 4e79_A 206 VLIGNDVRIGSNCSIDRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAG 280 (357)
T ss_dssp EEECTTCEECTTCEECCCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EEEcCCcEEccccEEeccccCCccccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECC
Confidence 344444444444444 233344444443333332 34444444444444332 355555555555555544
No 92
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.45 E-value=1.6e-12 Score=121.89 Aligned_cols=109 Identities=18% Similarity=0.174 Sum_probs=58.5
Q ss_pred cccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-------------eeEECCCCEECCCcEEeC--------e
Q 012817 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-------------RSVIGRHCRIGSNVKVVN--------S 398 (456)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-------------~s~Ig~~~~ig~~~~i~~--------s 398 (456)
..+..+..|++++.|++++.|++++.||++|.|++++.|. ++.||++|.|++++.|.. +
T Consensus 30 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~ 109 (262)
T 2qia_A 30 CIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLT 109 (262)
T ss_dssp CEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEE
T ss_pred CEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcC
Confidence 3334445555555555555555555566666666666654 356666666666666642 4
Q ss_pred EECCCCEECCCcEEc-C------------------eEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 399 VVMNHVTIGDGCSIQ-G------------------SVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 399 ~i~~~~~ig~~~~i~-~------------------~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+|++++.|+.++.|. + +.|++++.||.++.|. ++.||++++|++++.+..
T Consensus 110 ~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~~s~V~~ 179 (262)
T 2qia_A 110 KVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQ 179 (262)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECS
T ss_pred EECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCCEEccCCEECC
Confidence 455555444444442 3 4445555555555443 556666666666665543
No 93
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.45 E-value=2.8e-13 Score=121.71 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=83.3
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceE
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (456)
|++.+||||||.|+||. +.||+|+|++|+|||+|+++.+.. ++++|+|++++.. +.+. . .++.
T Consensus 5 m~~~~iILAgG~s~Rmg-----~~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~--~~~~----~-----~~~~ 67 (201)
T 1e5k_A 5 TTITGVVLAGGKARRMG-----GVDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQ--EIYQ----A-----SGLK 67 (201)
T ss_dssp CSEEEEEECCCCCSSSC-----SSCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSH--HHHH----T-----TSCC
T ss_pred CcceEEEEcCCCCCcCC-----CCCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcH--HHHh----h-----cCCe
Confidence 46889999999999993 379999999999999999999984 5899999987542 1221 1 1233
Q ss_pred EEEccC-C-cChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhHHHHH
Q 012817 81 VATVPE-D-VGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAA 125 (456)
Q Consensus 81 ~~~~~~-~-~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~~l~~ 125 (456)
++..+. . .|+.++++.+++.+..+.+++++||. +....++.+++.
T Consensus 68 ~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 68 VIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp EECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 443322 2 69999999999888767799999995 556668888875
No 94
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.45 E-value=1e-12 Score=117.28 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=66.8
Q ss_pred CEECCCCEECCCCeEe-----------------eeEECCCCEECCCcEEeCeEECCCCEECCCcEEc-CeEECCCCEECC
Q 012817 364 CMLGEGSQMGDKCSVK-----------------RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-GSVICSNAQLQE 425 (456)
Q Consensus 364 ~~i~~~~~I~~~~~i~-----------------~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~ 425 (456)
+.||++|.|++++.|. +++||+++.|+.++.+.++.|+++|.||.+|.|. ++.||++|.||+
T Consensus 52 i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~Iga 131 (194)
T 3tv0_A 52 IVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGA 131 (194)
T ss_dssp EEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECT
T ss_pred eEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeeeeecccceecceeeECCeEEECCCCEECC
Confidence 4567777777777774 2589999999999999999999999999999996 899999999999
Q ss_pred CcEec-CeEECCCCEECC
Q 012817 426 RVALK-DCQVGQGYVVSA 442 (456)
Q Consensus 426 ~~~i~-~~~i~~~~~v~~ 442 (456)
+++|. ++.|+++++|..
T Consensus 132 gsvV~~~~~Ip~~svv~G 149 (194)
T 3tv0_A 132 CCNLNTFEVIPENTVIYG 149 (194)
T ss_dssp TCEECCCEEECTTEEEES
T ss_pred CCEECCCcEECCCCEEEC
Confidence 99886 688888888743
No 95
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.44 E-value=1.7e-12 Score=118.41 Aligned_cols=86 Identities=19% Similarity=0.383 Sum_probs=59.5
Q ss_pred ccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEE
Q 012817 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVI 417 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii 417 (456)
++++...+.+.+.|++++.|++++.|++++.||++|.|. +++|+++|.||++|.|. ++.|.++++||++|+|+ +|+|
T Consensus 101 ~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i 180 (220)
T 4ea9_A 101 AIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARV 180 (220)
T ss_dssp EECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEE
T ss_pred cCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEE
Confidence 445666777777777777777777777777777777776 46777777777777776 56666667777766665 6666
Q ss_pred CCCCEECCC
Q 012817 418 CSNAQLQER 426 (456)
Q Consensus 418 ~~~~~I~~~ 426 (456)
.++++||++
T Consensus 181 ~~~~~Ig~~ 189 (220)
T 4ea9_A 181 IPGVTIGAD 189 (220)
T ss_dssp CTTCEECTT
T ss_pred cCCcEECCC
Confidence 666666643
No 96
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.44 E-value=1.1e-12 Score=116.78 Aligned_cols=76 Identities=24% Similarity=0.348 Sum_probs=63.1
Q ss_pred EECCCCEECCCCeEe------eeEECCCCEECCCcEEeCeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECC
Q 012817 365 MLGEGSQMGDKCSVK------RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQ 436 (456)
Q Consensus 365 ~i~~~~~I~~~~~i~------~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~ 436 (456)
.||++|.|+++|.|. +++||++|.||+++.|.+++|+++|.||.++.|. ++.|+++|.|+++++|. +..|++
T Consensus 74 ~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~~ 153 (191)
T 3ixc_A 74 EVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKS 153 (191)
T ss_dssp EECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCcCcCC
Confidence 457888888888887 7899999999999999999999999999999886 68888888888877765 366666
Q ss_pred CCEE
Q 012817 437 GYVV 440 (456)
Q Consensus 437 ~~~v 440 (456)
++++
T Consensus 154 ~~~v 157 (191)
T 3ixc_A 154 GELW 157 (191)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 6664
No 97
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.43 E-value=5.2e-13 Score=118.55 Aligned_cols=97 Identities=14% Similarity=0.291 Sum_probs=76.9
Q ss_pred CCceeCCCCEeCCCcEECCCC---EECCCCEECCCCeE------------eeeEECCCCEECCCcEEeCeEECCCCEECC
Q 012817 344 QNNIIHPSAELGSKTTVGPHC---MLGEGSQMGDKCSV------------KRSVIGRHCRIGSNVKVVNSVVMNHVTIGD 408 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~---~i~~~~~I~~~~~i------------~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~ 408 (456)
++..|++++.|++++.|..++ .||++|.|++++.| .+++||++|.|++++.|.+++|+++|.||.
T Consensus 32 ~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~ 111 (187)
T 3r3r_A 32 GDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGM 111 (187)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEEECT
T ss_pred CceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCEECC
Confidence 344555555555555554433 77888888888888 569999999999999999999999999999
Q ss_pred CcEEc-CeEECCCCEECCCcEec-CeEECCCCEE
Q 012817 409 GCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVV 440 (456)
Q Consensus 409 ~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v 440 (456)
++.|. ++.|+++|.|+++++|. +..|++++++
T Consensus 112 ~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv 145 (187)
T 3r3r_A 112 GSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLY 145 (187)
T ss_dssp TCEECTTCEECSSEEECTTCEECTTCEECTTEEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCcCcCCCcEE
Confidence 99995 89999999999888776 4677777764
No 98
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.43 E-value=9.4e-13 Score=125.09 Aligned_cols=103 Identities=19% Similarity=0.271 Sum_probs=63.1
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEeC---------eEECCCCEECCCcEEc
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCSIQ 413 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~~---------s~i~~~~~ig~~~~i~ 413 (456)
+++.|++++.|+++ .|+.++.||++|.|+.++.|++ +.||++|.|++++.|.+ ++|+++|.||.+|.|.
T Consensus 140 ~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~ 218 (304)
T 3eg4_A 140 HSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVV 218 (304)
T ss_dssp TTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEEC
T ss_pred CCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEc
Confidence 33444444444433 4444555555555555555543 56666666666666655 7778888888887764
Q ss_pred -CeEECCCCEECCCcEec-Ce-------------EECCCCEECCCcEEc
Q 012817 414 -GSVICSNAQLQERVALK-DC-------------QVGQGYVVSAGCEYK 447 (456)
Q Consensus 414 -~~ii~~~~~I~~~~~i~-~~-------------~i~~~~~v~~~~~~~ 447 (456)
+++||++|+|+++++|. ++ .|+++++|++|+.+.
T Consensus 219 ~gv~IG~~avIgagsvV~~g~~Igd~~~g~~~~~~Ip~~svV~~Gs~v~ 267 (304)
T 3eg4_A 219 EGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVVVAGTMPG 267 (304)
T ss_dssp TTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEEC
T ss_pred CCcEECCCcEECCCCEEcCCeEECccceeeeccCEeCCCCEEecCcEec
Confidence 78888888888888775 33 466666666555554
No 99
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.43 E-value=2.8e-12 Score=120.91 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=34.0
Q ss_pred eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 381 SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+.||++|.||+++.|. ++.|++++.|+.++.+. +++|++++.|++++.|. ++.|++++.+.+++.+.+
T Consensus 89 ~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~~~i~~~~~i~~ 159 (273)
T 3fs8_A 89 TIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTN 159 (273)
T ss_dssp CEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECTTCEECTTCEECC
T ss_pred CEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCceeCCceeecCceEecC
Confidence 4444555555555553 44555555555555553 45555555555555443 455555555555544443
No 100
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.42 E-value=1.6e-12 Score=120.05 Aligned_cols=99 Identities=20% Similarity=0.352 Sum_probs=71.9
Q ss_pred ccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-eeEECCCCEECCCcEEeC---------eEECCCCEECCCc
Q 012817 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGC 410 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-~s~Ig~~~~ig~~~~i~~---------s~i~~~~~ig~~~ 410 (456)
.+.+++.|++++.|++++.|+.++.||++|.|+.+|.|. +++||++|.|++++.+.+ ++|+++|.||.+|
T Consensus 99 ~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~ 178 (240)
T 3r8y_A 99 IIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANV 178 (240)
T ss_dssp EEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTC
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCC
Confidence 344556666666666666666666677777777667665 578888888888888875 7888888888888
Q ss_pred EE-cCeEECCCCEECCCcEecCeEECCCCEE
Q 012817 411 SI-QGSVICSNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 411 ~i-~~~ii~~~~~I~~~~~i~~~~i~~~~~v 440 (456)
.| .++.||++|.|++++++.+. |.+++++
T Consensus 179 ~I~~~~~Ig~~~~I~~gsvV~~~-vp~~~v~ 208 (240)
T 3r8y_A 179 VVLEGVTVGKGAVVAAGAVVTED-VPPYTVV 208 (240)
T ss_dssp EECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred EECCCcEECCCCEECCCCEECCC-cCCCcEE
Confidence 88 58888888888888887654 4555554
No 101
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.41 E-value=8.7e-13 Score=126.64 Aligned_cols=109 Identities=13% Similarity=0.206 Sum_probs=79.4
Q ss_pred CcccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCE----------------------------EC
Q 012817 339 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCR----------------------------IG 390 (456)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~----------------------------ig 390 (456)
...+.+.+.|++.+.|++++.|+ +|.|++++.|++++.|.+++|+++|. |+
T Consensus 77 ~~~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~ 155 (334)
T 2pig_A 77 NARITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIY 155 (334)
T ss_dssp TCEEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEEC
T ss_pred CcEEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEEC
Confidence 33444566666666666666665 67777777777777776665544444 45
Q ss_pred CCcEEeCeEECCCCEECCCcEEcCeEECCCCEECCCcEecCeE-----ECCCCEECCCcEEcC
Q 012817 391 SNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQ-----VGQGYVVSAGCEYKG 448 (456)
Q Consensus 391 ~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i~~~~-----i~~~~~v~~~~~~~~ 448 (456)
++++|.+|+|+++|+|+.+|.|++++|++++.|++++.+.+.. |++++.|+.++.+..
T Consensus 156 ~~a~I~~s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~V~R 218 (334)
T 2pig_A 156 DRATVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARVIA 218 (334)
T ss_dssp TTCEEESCEEETTCEECTTCEEESEEECTTCEECTTCEEECCSSCCEEECTTCEECTTCEEEC
T ss_pred CCCEEeccEEcCCCEEcCCeEEeCcEEcCCCEECCCcEECCceeccEEECCCcEEeeeEEEec
Confidence 5555666778888999999999999999999999999887654 888888888887754
No 102
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.41 E-value=8.5e-13 Score=118.97 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=82.0
Q ss_pred hhhccccccCCCcccCC--CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe----eeEECCCCEECCCcEE------
Q 012817 328 DVIGEANHLSGYNFSAQ--NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKV------ 395 (456)
Q Consensus 328 ~~l~~~~~~~~~~~~~~--~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i------ 395 (456)
..+.++..+.....+.. +..|++++.|++++.|++++.||++|.|++++.|. +++||++|.|+++|.|
T Consensus 33 ~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~ 112 (205)
T 3vbi_A 33 LSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDD 112 (205)
T ss_dssp SEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECC
T ss_pred eEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCC
Confidence 33455554544433333 67777888888888887888899999999999993 4899999999999999
Q ss_pred --------------------eCeEECCCCEECCCcEEc-CeEECCCCEECCCcEecCeEECCCCEE
Q 012817 396 --------------------VNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 396 --------------------~~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v 440 (456)
.+++|+++|.||.+|.|. ++.|+++|.|+++++|.+. |.+++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~-v~~~~v~ 177 (205)
T 3vbi_A 113 FSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKES-LDDWYIY 177 (205)
T ss_dssp CSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred cccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCc-cCCCeEE
Confidence 356777777777777775 7777777777777777654 3455444
No 103
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.41 E-value=4.5e-12 Score=124.84 Aligned_cols=15 Identities=7% Similarity=0.020 Sum_probs=6.3
Q ss_pred eEECCCCEECCCcEE
Q 012817 432 CQVGQGYVVSAGCEY 446 (456)
Q Consensus 432 ~~i~~~~~v~~~~~~ 446 (456)
+.||++++|++++.+
T Consensus 305 v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 305 ICIADHVIMMAQTGV 319 (374)
T ss_dssp CEECTTEEECTTCEE
T ss_pred cccCCCcEEccCcee
Confidence 344444444444443
No 104
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.40 E-value=3.1e-12 Score=121.86 Aligned_cols=91 Identities=20% Similarity=0.313 Sum_probs=47.0
Q ss_pred CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-CeEECC--------CCEECCCcEEc-
Q 012817 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMN--------HVTIGDGCSIQ- 413 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-~s~i~~--------~~~ig~~~~i~- 413 (456)
.+.+++++.||+++.|+++ .|+.++.||++|.|.+ ++||++|.||++|.|+ ++.|+. +++||++|+|+
T Consensus 151 ~a~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~ 229 (316)
T 3tk8_A 151 PAIARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGA 229 (316)
T ss_dssp TCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECT
T ss_pred CeEEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECC
Confidence 3444444444444444433 4444566666665554 5666666666666665 444444 45555555554
Q ss_pred CeEECCCCEECCCcEec-CeEECC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQ 436 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~ 436 (456)
+|+|++++.||++++|. +++|++
T Consensus 230 ~a~I~~gv~IG~g~vIgagsvV~~ 253 (316)
T 3tk8_A 230 RSEVVEGVIVEENSVISMGVYLGQ 253 (316)
T ss_dssp TCEECTTCEECTTCEECTTCEECT
T ss_pred CCEEcCCCEECCCCEEcCCCEEcC
Confidence 55555555555444442 344443
No 105
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.40 E-value=4.6e-13 Score=125.40 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEcC---------
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQG--------- 414 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~~--------- 414 (456)
..+.|+|.+.|.+++.||+++.|+++++|+.+ +.||++|.|+.++.++ ++|+++|.|+.++.|.+
T Consensus 183 ~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~n-----a~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~ 256 (347)
T 3r5d_A 183 AGVRIADTARVRLGAYIGEGTTVMHEGFVNFN-----AGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIV 256 (347)
T ss_dssp TTEEESSGGGBBTTEEECTTEEECTTCEECTT-----EEESSSEEECSEECTT-CEECTTEEECTTCEECC------CCC
T ss_pred CCcEECCcCEECCCCEECCCCEECCCCEECCC-----CEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCccc
Confidence 34555555555555555555544444444444 3556666666655443 66777777777777753
Q ss_pred eEECCCCEECCCcEecCeEECCCCEECCCcEEcCC
Q 012817 415 SVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~~~~~~ 449 (456)
++||++|.||++++| ++.||++++|++|+.+...
T Consensus 257 V~IGdnv~IGAnAtI-GVtIGd~~iIGAGSVVtkd 290 (347)
T 3r5d_A 257 ISVGEGCLIGANAGI-GIPLGDRNIVEAGLYITAG 290 (347)
T ss_dssp CEECTTCEECTTCEE-CSCBCTTCEECTTCEECTT
T ss_pred eEECCCCEECCCCEE-eeEECCCCEECCCCEECCC
Confidence 677777777777777 7777777777777665543
No 106
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.40 E-value=5.9e-12 Score=120.46 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=20.9
Q ss_pred CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+++|+++|.||.++.|. ++.||++++|++++.+..
T Consensus 168 ~v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V~~ 203 (305)
T 3t57_A 168 HVVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVVSQ 203 (305)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCEECCceEEcCCCEEcCCeEECCCCEEcCCCeEcc
Confidence 35555555566555443 566677777766666543
No 107
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.40 E-value=1.4e-12 Score=116.01 Aligned_cols=97 Identities=15% Similarity=0.264 Sum_probs=74.6
Q ss_pred CCceeCCCCEeCCCcEECC---CCEECCCCEECCCCeEeee------------EECCCCEECCCcEEeCeEECCCCEECC
Q 012817 344 QNNIIHPSAELGSKTTVGP---HCMLGEGSQMGDKCSVKRS------------VIGRHCRIGSNVKVVNSVVMNHVTIGD 408 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~---~~~i~~~~~I~~~~~i~~s------------~Ig~~~~ig~~~~i~~s~i~~~~~ig~ 408 (456)
.+..|++++.|++++.|.. ++.||++|.|++++.|..+ +||++|.|++++.|.+++|+++|.||.
T Consensus 36 ~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~ 115 (189)
T 3r1w_A 36 GDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIGM 115 (189)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEEECT
T ss_pred eeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcEECC
Confidence 3444555555555555542 2367888888888888654 999999999999999999999999999
Q ss_pred CcEEc-CeEECCCCEECCCcEec-CeEECCCCEE
Q 012817 409 GCSIQ-GSVICSNAQLQERVALK-DCQVGQGYVV 440 (456)
Q Consensus 409 ~~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~~v 440 (456)
++.|. ++.|+++|.|+++++|. +..|++++++
T Consensus 116 ~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~vv 149 (189)
T 3r1w_A 116 KSMIMDGAIVEDEVIVAAGATVSPGKVLESGFVY 149 (189)
T ss_dssp TCEECTTCEECSSCEECTTCEECTTCEECTTEEE
T ss_pred CCEEcCCCEECCCCEEccCCEECCCCEeCCCCEE
Confidence 99985 88899999998888775 4677777766
No 108
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.39 E-value=2.5e-12 Score=120.90 Aligned_cols=102 Identities=14% Similarity=0.239 Sum_probs=54.8
Q ss_pred CceeCCCCEeCCCcEEC-----CCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe---------CeEECCCCEECCC
Q 012817 345 NNIIHPSAELGSKTTVG-----PHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV---------NSVVMNHVTIGDG 409 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~-----~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~---------~s~i~~~~~ig~~ 409 (456)
.+.+++++.|++++.|+ .++.||++|.|+.++.|++ +.||++|.|++++.|. +++|+++|.||.+
T Consensus 110 ~a~I~~~~~Ig~g~~I~~~~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~ 189 (276)
T 3gos_A 110 PATVRKGAFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGAR 189 (276)
T ss_dssp TCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTT
T ss_pred CcEECCCCEECCCCEEcCCEEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCC
Confidence 33444444444444443 3555555555555554443 5556666666655553 3556666666666
Q ss_pred cEEc-CeEECCCCEECCCcEec-CeEECCCC-------EECCCcEE
Q 012817 410 CSIQ-GSVICSNAQLQERVALK-DCQVGQGY-------VVSAGCEY 446 (456)
Q Consensus 410 ~~i~-~~ii~~~~~I~~~~~i~-~~~i~~~~-------~v~~~~~~ 446 (456)
|.|. ++.||++|.||++++|. ++.|++.+ .|++++.+
T Consensus 190 a~I~~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svv 235 (276)
T 3gos_A 190 SEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVV 235 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred CEECCCCEECCCCEECCCCEECCCcEEccccccceeccccCCCcEE
Confidence 6664 66666666666666654 34444443 45555554
No 109
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.39 E-value=9.9e-13 Score=128.46 Aligned_cols=114 Identities=19% Similarity=0.264 Sum_probs=89.7
Q ss_pred CCceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHH-CCCCEEEEEecCchhhHHHHhhhhhhccCccce
Q 012817 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (456)
Q Consensus 1 m~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~-~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i 79 (456)
|++.+||||||.|+|| ....||+|+|++|+|||+|+++.+.+ .++++++|+++ . .+.+.+++.+ +
T Consensus 2 mki~aIILAaG~ssRm----g~~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~--~~~i~~~~~~-------v 67 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRF----NTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-N--ITYMKKFTKN-------Y 67 (371)
T ss_dssp CCEEEEEECCSCCTTT----CSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-C--HHHHHTTCSS-------S
T ss_pred CccEEEEECCCCCccC----CCCCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-C--HHHHHHHhCC-------C
Confidence 5789999999999999 44579999999999999999999998 57999999997 3 2344443321 3
Q ss_pred EEEEccCCcChHHHHHHHHhcCCCCcEEEEcCC--cccCCChhHHHHHHHhcC
Q 012817 80 EVATVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRHD 130 (456)
Q Consensus 80 ~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~ 130 (456)
.++ ....++.++++.+++.+..+.++++.|| ++....++++++.+.+.+
T Consensus 68 ~~v--~~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 68 EFI--EGGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp EEE--ECCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCS
T ss_pred EEE--eCCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcC
Confidence 343 3457788999999988866779999999 455567889998877654
No 110
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.39 E-value=4.7e-12 Score=118.97 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=56.9
Q ss_pred CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc---------C
Q 012817 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ---------G 414 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~---------~ 414 (456)
...++|++.|++++.|++++.|+++ .|+.+ +.||++|.|++++.|+ ++.|+++|.|+.++.|. +
T Consensus 104 g~~I~p~a~I~~~~~Ig~g~~I~~~-~i~~~-----~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~ 177 (276)
T 3gos_A 104 GFRVVPPATVRKGAFIARNTVLMPS-YVNIG-----AFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANP 177 (276)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSE-EECTT-----CEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCC
T ss_pred CcEECCCcEECCCCEECCCCEEcCC-EEcCC-----eEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCC
Confidence 3445555555555555555555443 23322 4666666666666666 36666666666666663 3
Q ss_pred eEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 415 SVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
++||++|.||++++|. ++.||++++|++|+.+..
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~ 212 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQ 212 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 6666666666666553 566666666666666554
No 111
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.38 E-value=4.6e-12 Score=120.31 Aligned_cols=94 Identities=20% Similarity=0.331 Sum_probs=46.8
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-CeEECC--------CCEECCCcEEc
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMN--------HVTIGDGCSIQ 413 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-~s~i~~--------~~~ig~~~~i~ 413 (456)
+.+.|++++.|++++.|+++ .|+.++.||++|.|.+ ++||++|.||++|.|. ++.|.. .++||++|+|+
T Consensus 134 p~a~I~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG 212 (304)
T 3eg4_A 134 PNCIVRHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIG 212 (304)
T ss_dssp TTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEEC
T ss_pred CCEEECCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEEC
Confidence 34444444444444444443 4455555555555553 5555555555555555 344444 35555555554
Q ss_pred -CeEECCCCEECCCcEec-CeEECCCC
Q 012817 414 -GSVICSNAQLQERVALK-DCQVGQGY 438 (456)
Q Consensus 414 -~~ii~~~~~I~~~~~i~-~~~i~~~~ 438 (456)
+|+|.+++.||++++|. +++|.+++
T Consensus 213 ~~a~I~~gv~IG~~avIgagsvV~~g~ 239 (304)
T 3eg4_A 213 ARSEVVEGCIVREGSVLGMGVFIGKST 239 (304)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCEEcCCcEECCCcEECCCCEEcCCe
Confidence 55555555555444443 34444433
No 112
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.37 E-value=6.7e-13 Score=119.26 Aligned_cols=103 Identities=23% Similarity=0.276 Sum_probs=79.7
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEE
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~ 81 (456)
++.+||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++++|++++... +++. ++.+
T Consensus 14 ~~~~iILA~G~g~Rm----g--~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~-----~~~~-------~~~~ 74 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRF----G--EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK-----FSFL-------NAPV 74 (201)
T ss_dssp CCEEEEEEESSCCCC----S--TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG-----GGGG-------TCCE
T ss_pred CceEEEECCCCCccC----C--CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH-----hhcC-------CceE
Confidence 458999999999999 2 799999999999999999999988 8999999985532 1121 2444
Q ss_pred EEcc-CCcChHHHHHHHHhcCCCCcEEEEcCCc--ccCCChhH-HH
Q 012817 82 ATVP-EDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGA-VT 123 (456)
Q Consensus 82 ~~~~-~~~gt~~al~~~~~~l~~~~~lv~~~D~--i~~~~l~~-~l 123 (456)
+..+ ...|++++++.+++.+..+.+++++||. +....++. ++
T Consensus 75 v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 4433 3579999999999888767899999995 33334555 54
No 113
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.36 E-value=1.9e-12 Score=120.39 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=14.0
Q ss_pred eEECCCCEECCCcEecCeEECCCCEECCCcEE
Q 012817 415 SVICSNAQLQERVALKDCQVGQGYVVSAGCEY 446 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~~~ 446 (456)
++||++|.||++++| ++.||++++|++|+.+
T Consensus 234 V~IGDnv~IGanAtI-gVtIGd~~iIGAGSVV 264 (332)
T 3fsy_A 234 ISIGKRCLLGANSGL-GISLGDDCVVEAGLYV 264 (332)
T ss_dssp CEECTTCEECTTCEE-CSCBCSSCEECTTCEE
T ss_pred eEECCCCEECCCCEE-eeEECCCCEECCCCEE
Confidence 444444444444444 4444444444444443
No 114
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.36 E-value=2.2e-12 Score=131.22 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=57.4
Q ss_pred CCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-----------------CeEECCCCEEC
Q 012817 363 HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-----------------GSVICSNAQLQ 424 (456)
Q Consensus 363 ~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-----------------~~ii~~~~~I~ 424 (456)
++.||++|.|+ ++.|.+++||++|.||+++.|. +++|+++|.||+++.+. ++.||++|.||
T Consensus 309 ~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig 387 (468)
T 1hm9_A 309 DSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFG 387 (468)
T ss_dssp SCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEEC
T ss_pred ccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccccCCcEEC
Confidence 33455566666 6666677888888888888887 77777777766655554 35566777777
Q ss_pred CCcEec--------CeEECCCCEECCCcEEcCC
Q 012817 425 ERVALK--------DCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 425 ~~~~i~--------~~~i~~~~~v~~~~~~~~~ 449 (456)
+++++. .++||+++.||+++.+.+.
T Consensus 388 ~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~ 420 (468)
T 1hm9_A 388 AGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAP 420 (468)
T ss_dssp TTCEEECBCSSCBCCEEECTTCEECTTCEEESS
T ss_pred CCcEEecCcCccCCCcEECCCeEECCCCEEeCC
Confidence 776653 3677777777777665443
No 115
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.36 E-value=2e-12 Score=116.52 Aligned_cols=114 Identities=17% Similarity=0.244 Sum_probs=83.7
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEEEEEecCchhhHHHHhhhhhhccCccceEEE
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~ 82 (456)
|.+||||||.|+|| + .||+|+|++|+|||+|+++.+..+ +++|++++.+ .+..+. .. .++.++
T Consensus 1 m~aiILAgG~s~Rm----g--~~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~~~---~~~~~~-~~----~~~~~v 63 (208)
T 3ngw_A 1 MKVAVLVGGVGRRI----G--MEKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRDEK---QAEKLS-SR----YEAEFI 63 (208)
T ss_dssp CEEEEECCCCCTTT----T--SCGGGCEETTEEHHHHHHHHHTTS---EEEEECSSHH---HHHHHH-TT----SCSCEE
T ss_pred CEEEEECCCchhhC----C--CCCcccEECCeeHHHHHHHHhcCC---CEEEEECCHH---HHHHHH-Hh----cCCeEE
Confidence 68999999999999 3 799999999999999999999876 8998887432 233222 11 123343
Q ss_pred Ecc-CCcChHHHHHHHHhcCCCCcEEEEcCC--cccCCChhHHHHHHHhcCceEEE
Q 012817 83 TVP-EDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTA 135 (456)
Q Consensus 83 ~~~-~~~gt~~al~~~~~~l~~~~~lv~~~D--~i~~~~l~~~l~~~~~~~a~~t~ 135 (456)
... ...|...+++.+++.+ .+.+ +++|| ++....++.+++.+.+.++++.+
T Consensus 64 ~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 64 WDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred ecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 222 2357889999998877 5667 99999 45556788898887765555443
No 116
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.35 E-value=3.2e-12 Score=128.62 Aligned_cols=97 Identities=15% Similarity=0.290 Sum_probs=83.6
Q ss_pred CCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEc-C----eEEC
Q 012817 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-G----SVIC 418 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~-~----~ii~ 418 (456)
+++.|++++.|++++.| .++.||++|.|+++|.|.+++||++|.|++++.|.+++|+++|.||.+|.|. + ++|+
T Consensus 290 g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~IG 368 (496)
T 3c8v_A 290 GDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIG 368 (496)
T ss_dssp SSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEEEC
T ss_pred CCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceEEC
Confidence 45555666666666666 5677899999999999999999999999999999999999999999999997 5 6999
Q ss_pred CCCEECCCcEec---CeEECCCCEEC
Q 012817 419 SNAQLQERVALK---DCQVGQGYVVS 441 (456)
Q Consensus 419 ~~~~I~~~~~i~---~~~i~~~~~v~ 441 (456)
++|.||++++|. ++.|+++++|.
T Consensus 369 ~~a~IGagsvV~~~~~~~I~~~s~v~ 394 (496)
T 3c8v_A 369 DGCVVMPHTIIDLEEPLEIPAGHLVW 394 (496)
T ss_dssp TTCEECTTCEEECSSCEEECSSEEEC
T ss_pred CCCEECCCCEEecCCCcEeCCCCEEE
Confidence 999999999887 68888888877
No 117
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.35 E-value=5.5e-12 Score=120.16 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=48.0
Q ss_pred cCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEeC---------eEECCCCEECCCcE
Q 012817 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCS 411 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~~---------s~i~~~~~ig~~~~ 411 (456)
+...+.|++++.|+++ .++.++.||++|.|+.++.|++ +.||++|.|++++.|.+ ++|+++|.||.+|.
T Consensus 154 I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~ 232 (316)
T 3tk8_A 154 ARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSE 232 (316)
T ss_dssp EBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCE
T ss_pred EeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCE
Confidence 3344555555555443 4444444555555444444442 45666666666665554 55666666666666
Q ss_pred Ec-CeEECCCCEECCCcEec
Q 012817 412 IQ-GSVICSNAQLQERVALK 430 (456)
Q Consensus 412 i~-~~ii~~~~~I~~~~~i~ 430 (456)
|. ++.||++|+||+|++|.
T Consensus 233 I~~gv~IG~g~vIgagsvV~ 252 (316)
T 3tk8_A 233 VVEGVIVEENSVISMGVYLG 252 (316)
T ss_dssp ECTTCEECTTCEECTTCEEC
T ss_pred EcCCCEECCCCEEcCCCEEc
Confidence 54 56666666666666554
No 118
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.35 E-value=3.3e-12 Score=129.50 Aligned_cols=83 Identities=17% Similarity=0.326 Sum_probs=45.5
Q ss_pred ECCCCEECCCCeEeeeEECCCCEECCCcEEe-CeEEC----------------------------------CCCEECCCc
Q 012817 366 LGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVM----------------------------------NHVTIGDGC 410 (456)
Q Consensus 366 i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-~s~i~----------------------------------~~~~ig~~~ 410 (456)
||++|.|++++.|.++.||++|.||+++.|. +++|+ ++|.||.++
T Consensus 303 ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~ 382 (456)
T 2v0h_A 303 IGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGV 382 (456)
T ss_dssp ECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTC
T ss_pred EeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEeccEECCCCEeccceeecCcEECCCcEECCce
Confidence 4555555555555555566655555555554 44444 444444444
Q ss_pred EEc--------CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 411 SIQ--------GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 411 ~i~--------~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
.+. ++.||++|.||++++|. ++.||++++|++++.+.+
T Consensus 383 ~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v~~ 429 (456)
T 2v0h_A 383 ITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITR 429 (456)
T ss_dssp EEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEECS
T ss_pred EEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEECC
Confidence 442 35566666666666543 566666666666665543
No 119
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.34 E-value=4e-12 Score=118.24 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=14.8
Q ss_pred EECCCCEECCCcEe-cCeEECCCCEECCCcEE
Q 012817 416 VICSNAQLQERVAL-KDCQVGQGYVVSAGCEY 446 (456)
Q Consensus 416 ii~~~~~I~~~~~i-~~~~i~~~~~v~~~~~~ 446 (456)
+|+++|.||++++| .+++||++++|++++.+
T Consensus 165 ~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 196 (252)
T 3jqy_B 165 IISSYVWVGRNVSIMKGVSVGSGSVIGYGSIV 196 (252)
T ss_dssp EECSSCEECSSEEECTTCEECTTCEECTTCEE
T ss_pred EEecCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 45555555555433 24444444444444444
No 120
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.31 E-value=9.9e-12 Score=115.56 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=61.0
Q ss_pred cCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEe-----eeEECCCCEECCCcEEeC---------eEECCCCEEC
Q 012817 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVN---------SVVMNHVTIG 407 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~-----~s~Ig~~~~ig~~~~i~~---------s~i~~~~~ig 407 (456)
+++.++|.+++.|++++.|+++++|..++.|+.+|.|. .+.||++|.|++++.|.. ++|+++|.||
T Consensus 164 I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IG 243 (332)
T 3fsy_A 164 IADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLG 243 (332)
T ss_dssp ESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTCEEC
T ss_pred ECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCCEEC
Confidence 34555555666666666666666666666666666654 257888888888888864 6788888888
Q ss_pred CCcEEcCeEECCCCEECCCcEec
Q 012817 408 DGCSIQGSVICSNAQLQERVALK 430 (456)
Q Consensus 408 ~~~~i~~~ii~~~~~I~~~~~i~ 430 (456)
.++.| ++.||++|+||+|++|.
T Consensus 244 anAtI-gVtIGd~~iIGAGSVVt 265 (332)
T 3fsy_A 244 ANSGL-GISLGDDCVVEAGLYVT 265 (332)
T ss_dssp TTCEE-CSCBCSSCEECTTCEEC
T ss_pred CCCEE-eeEECCCCEECCCCEEC
Confidence 88888 77788887777777664
No 121
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.29 E-value=7.9e-12 Score=111.50 Aligned_cols=51 Identities=24% Similarity=0.461 Sum_probs=32.8
Q ss_pred CCceeCC--CCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeC
Q 012817 344 QNNIIHP--SAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVN 397 (456)
Q Consensus 344 ~~~~i~~--~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~ 397 (456)
..+.|.| .+.++.++.||++++|+.+|.|.+++. .+||++|.||++|.|..
T Consensus 61 ~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i~~~~~---i~IG~~~~Ig~~~~I~~ 113 (195)
T 3nz2_A 61 HKSCVQPPFHCEFGKTIRIGDHTFINMNVVMLDGAP---ITIGDHVLIGPSTQFYT 113 (195)
T ss_dssp TTCEECSSEEESCSTTEEECTTCEECTTEEEECSSC---EEECTTCEECTTCEEEC
T ss_pred CCcEEcCCeEEEeCCCeEECCCcEECcCCEEecCce---EEECCCCEECCCCEEec
Confidence 4555655 334555556666666655555544433 38999999999998874
No 122
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.28 E-value=1.7e-11 Score=111.15 Aligned_cols=103 Identities=11% Similarity=0.100 Sum_probs=59.6
Q ss_pred ceeCCCCEeCCC-cEECC---CCEECCCCEECCCCeEe----eeEECCCCEECCCcEE----eCeEECCCCEECCCcEEc
Q 012817 346 NIIHPSAELGSK-TTVGP---HCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKV----VNSVVMNHVTIGDGCSIQ 413 (456)
Q Consensus 346 ~~i~~~~~i~~~-~~i~~---~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i----~~s~i~~~~~ig~~~~i~ 413 (456)
.++++++.|.+. +.+.+ ++.||++|.|++++.|. ++.||++|.|++.+.+ .+++|+++|.||++|.|.
T Consensus 37 v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~ 116 (215)
T 2wlg_A 37 VYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIR 116 (215)
T ss_dssp EEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEE
T ss_pred EEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEE
Confidence 344444444443 23322 25555555565555554 2666666666664443 345666666666666665
Q ss_pred C--------------------eEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 414 G--------------------SVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 414 ~--------------------~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+ ++|+++|.||++++|. +++||++++|++++.+..
T Consensus 117 ~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~ 172 (215)
T 2wlg_A 117 NTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYK 172 (215)
T ss_dssp SCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEECS
T ss_pred CCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEEcC
Confidence 3 3677777777776553 666677777766666543
No 123
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.28 E-value=1.2e-11 Score=115.93 Aligned_cols=89 Identities=15% Similarity=0.170 Sum_probs=61.5
Q ss_pred cccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee-----eEECCCCEECCCcEEeC---------eEECCCCE
Q 012817 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-----SVIGRHCRIGSNVKVVN---------SVVMNHVT 405 (456)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~-----s~Ig~~~~ig~~~~i~~---------s~i~~~~~ 405 (456)
..+++.+.|.+++.|++++.|+++++|+.++.|+++|.|.. +.||++|.|++++.|.. ++|+++|.
T Consensus 185 v~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~ 264 (347)
T 3r5d_A 185 VRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCL 264 (347)
T ss_dssp EEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTTCE
T ss_pred cEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCCCE
Confidence 35667788888888888888888888888888888887753 56777777777777653 45666666
Q ss_pred ECCCcEEcCeEECCCCEECCCcEe
Q 012817 406 IGDGCSIQGSVICSNAQLQERVAL 429 (456)
Q Consensus 406 ig~~~~i~~~ii~~~~~I~~~~~i 429 (456)
||.++.| ++.||++|+||+|++|
T Consensus 265 IGAnAtI-GVtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 265 IGANAGI-GIPLGDRNIVEAGLYI 287 (347)
T ss_dssp ECTTCEE-CSCBCTTCEECTTCEE
T ss_pred ECCCCEE-eeEECCCCEECCCCEE
Confidence 6666665 5555555555555444
No 124
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.27 E-value=2.4e-11 Score=117.29 Aligned_cols=134 Identities=13% Similarity=0.207 Sum_probs=79.4
Q ss_pred CcchhhcccC--HHHHHHHhHhhhccc--cccC---CC------cccCCCceeCCCCEeCCCcEECCCCEECCC-CEECC
Q 012817 309 NSKYCVRLNS--IQAFMDINRDVIGEA--NHLS---GY------NFSAQNNIIHPSAELGSKTTVGPHCMLGEG-SQMGD 374 (456)
Q Consensus 309 ~~~~~~~i~~--~~~y~~~~~~~l~~~--~~~~---~~------~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~-~~I~~ 374 (456)
...+|.+.+. +..|.....++.... ..+. .. ........|+|++.|++++.||+++.|+++ |.|+.
T Consensus 168 ~~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~ 247 (387)
T 2rij_A 168 SNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVRMGASLAAGTTIMPGASYVNF 247 (387)
T ss_dssp CCEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBBTTCBCCTTCEECSSSCEECT
T ss_pred ceeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEECCCeEEcCCCEEeCCeeEECC
Confidence 4567777776 666666666554221 1111 11 111125556666666655566556665554 55555
Q ss_pred CCeEeeeEECCCCEECCCcEEe-CeEECCCCEECCCcEE----cC-----eEECCCCEECCCcEecCeEECCCCEECCCc
Q 012817 375 KCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI----QG-----SVICSNAQLQERVALKDCQVGQGYVVSAGC 444 (456)
Q Consensus 375 ~~~i~~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i----~~-----~ii~~~~~I~~~~~i~~~~i~~~~~v~~~~ 444 (456)
++. +||+ |.|+. .|+ +++|+++|.|+.++.| .+ ++||++|.||++++ .+++||++++|++|+
T Consensus 248 nv~----vIG~-~~I~~--~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdgavIGAGs 319 (387)
T 2rij_A 248 NAG----TTGA-CMVEG--RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDNCIVDAGI 319 (387)
T ss_dssp TCE----ESSC-CEECS--EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTTCEECTTC
T ss_pred CcE----EECC-EEEee--EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCCCEECCCC
Confidence 542 2555 55543 454 5666667777766653 22 78888888888888 778888888888887
Q ss_pred EEcCCe
Q 012817 445 EYKGES 450 (456)
Q Consensus 445 ~~~~~~ 450 (456)
.+...+
T Consensus 320 VVt~dv 325 (387)
T 2rij_A 320 AVLEGT 325 (387)
T ss_dssp EECTTC
T ss_pred EECCCc
Confidence 766543
No 125
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.24 E-value=3.3e-11 Score=112.01 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=74.4
Q ss_pred CceeCCCCEeCCCcEE--CCCCEECCCCEECCCCeEe----eeEECCCCEECCCcEEeCe--------------------
Q 012817 345 NNIIHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVVNS-------------------- 398 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~i~----~s~Ig~~~~ig~~~~i~~s-------------------- 398 (456)
...|++++.|.+++.+ +.++.||++|.|+++|.|. +++||++|.||++|.|.++
T Consensus 85 ~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v 164 (252)
T 3jqy_B 85 YVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDI 164 (252)
T ss_dssp EEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCE
T ss_pred eEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCe
Confidence 3456666666666666 3477889999999999888 7999999999999999864
Q ss_pred EECCCCEECCCcEEc-CeEECCCCEECCCcEecCeEECCCCEE
Q 012817 399 VVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 399 ~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v 440 (456)
+|+++|.||.+|.|. ++.|+++|.||++++|.+. |.+++++
T Consensus 165 ~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~~-vp~~~~~ 206 (252)
T 3jqy_B 165 IISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTKD-VPSMCAA 206 (252)
T ss_dssp EECSSCEECSSEEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred EEecCcEECCCCEECCCCEECCCCEECCCCEECcc-cCCCCEE
Confidence 788888888888775 7888888888888887654 4555554
No 126
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.24 E-value=1.9e-11 Score=109.39 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCceeCCCCEe--CCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCe-------------------EECC
Q 012817 344 QNNIIHPSAEL--GSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNS-------------------VVMN 402 (456)
Q Consensus 344 ~~~~i~~~~~i--~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s-------------------~i~~ 402 (456)
.+..|.+++.+ +.++.||+++.|+++|.|.+++. .+||++|.||++|.|..+ +|++
T Consensus 59 ~~~~i~~~~~~~~g~~~~IG~~~~I~~~~~i~~~~~---v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 135 (199)
T 3ftt_A 59 DNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQ---ITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGS 135 (199)
T ss_dssp SSEEECSSEEESSSTTEEECSSEEECTTEEEECSSC---EEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred CCeEEeCCEEEEecCCcEECCCeEECCCeEEecCCE---EEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcC
Confidence 56666666665 56666666666666666654432 489999999999999532 3444
Q ss_pred CCEECCCcEEc-CeEECCCCEECCCcEecC
Q 012817 403 HVTIGDGCSIQ-GSVICSNAQLQERVALKD 431 (456)
Q Consensus 403 ~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~ 431 (456)
+|.||.+|.|. ++.||++|+||++++|..
T Consensus 136 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~ 165 (199)
T 3ftt_A 136 NTWFGGHVAVLPGVTIGEGSVIGAGSVVTK 165 (199)
T ss_dssp SEEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEEcCCCEECCCCEECCCCEECCCCEECc
Confidence 44444444443 444555555554444443
No 127
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.23 E-value=2.4e-11 Score=123.15 Aligned_cols=26 Identities=12% Similarity=0.174 Sum_probs=17.1
Q ss_pred eeeEEEEecCcchh--hcccCHHHHHHHhH
Q 012817 300 HKCCVYIASNSKYC--VRLNSIQAFMDINR 327 (456)
Q Consensus 300 ~~~~~yi~~~~~~~--~~i~~~~~y~~~~~ 327 (456)
.++..| ...++| .+++++++|..+..
T Consensus 213 ~~v~~~--~~~~~~~~~~I~tp~Dl~~ae~ 240 (459)
T 4fce_A 213 KKIATV--HPTRLSEVEGVNNRLQLSALER 240 (459)
T ss_dssp CCEEEE--CCSSGGGGCCCSSHHHHHHHHH
T ss_pred CeEEEE--EcCCHHHhhCCCCHHHHHHHHH
Confidence 345555 455555 45889999988764
No 128
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.22 E-value=3.3e-11 Score=120.73 Aligned_cols=99 Identities=15% Similarity=0.246 Sum_probs=81.3
Q ss_pred CCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEcCeEECCCCEECCCcEe
Q 012817 350 PSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVAL 429 (456)
Q Consensus 350 ~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i 429 (456)
+...+.+.+.+.+++.|+++. ++.++.+.++.||++|.| +++.|.+|+|+++|+||++|.|.+|+|+++|.|+++++|
T Consensus 295 ~~~~i~~~~~i~~~~~i~~~~-~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i 372 (420)
T 3brk_X 295 KSWPIWTYAEITPPAKFVHDD-EDRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQL 372 (420)
T ss_dssp CSSCCCCCCCCCCCCEEECBC-SSCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred CCCceeeccccCCCcEEeccc-ccCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEE
Confidence 333444444455555554421 233777888999999999 899999999999999999999999999999999999999
Q ss_pred cCeEECCCCEECCCcEEcCCe
Q 012817 430 KDCQVGQGYVVSAGCEYKGES 450 (456)
Q Consensus 430 ~~~~i~~~~~v~~~~~~~~~~ 450 (456)
.+|+||+++.|++|+.+.+..
T Consensus 373 ~~~~ig~~~~i~~~~~i~~~~ 393 (420)
T 3brk_X 373 SNVVIDHGVVIPEGLIVGEDP 393 (420)
T ss_dssp EEEEECTTCEECTTCEESSCH
T ss_pred eceEECCCCEECCCCEEeCCC
Confidence 999999999999999988653
No 129
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.21 E-value=6.7e-11 Score=104.83 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=52.5
Q ss_pred CCCceeCCCCEe--CCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-------------------CeEEC
Q 012817 343 AQNNIIHPSAEL--GSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-------------------NSVVM 401 (456)
Q Consensus 343 ~~~~~i~~~~~i--~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-------------------~s~i~ 401 (456)
+.+..|.|++.+ |.++.||+++.|+.+|.|.+.+. ..||++|.||++|.|. .++|+
T Consensus 60 g~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~---i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG 136 (188)
T 3srt_A 60 GKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCK---IEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIG 136 (188)
T ss_dssp CSCEEECSCEEESSSTTEEECTTEEECTTEEEECSSC---EEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEEC
T ss_pred CCCCEEcCCEEEEeCCCeEECCcccccCceEEecCCc---eEECCeeEECCCcEEeeCCccCchhhccccceECCCcEEC
Confidence 356667776665 35566666666666666655443 3899999999999993 34455
Q ss_pred CCCEECCCcEEc-CeEECCCCEECCCcEecCe
Q 012817 402 NHVTIGDGCSIQ-GSVICSNAQLQERVALKDC 432 (456)
Q Consensus 402 ~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~ 432 (456)
++|.||.+|.|. ++.||++|+||++++|.+.
T Consensus 137 ~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 137 DNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp SSCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred CCcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 555555555553 4555555555555544433
No 130
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.21 E-value=1.2e-10 Score=103.50 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=33.6
Q ss_pred CceeCCCCEe--CCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeC
Q 012817 345 NNIIHPSAEL--GSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVN 397 (456)
Q Consensus 345 ~~~i~~~~~i--~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~ 397 (456)
.+.|+|++.+ +.++.||++++|+++|.|.+.+ +..||++|.||++|.|.+
T Consensus 64 ~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~---~v~IG~~~~Ig~~~~I~~ 115 (190)
T 3hjj_A 64 KAQINPDFRCDYGYNIHVGKSFFANFNCVILDVC---EVRIGDHCMFAPGVHIYT 115 (190)
T ss_dssp CCEECSSCEESSSTTEEECTTCEECTTCEEECSS---CEEECTTCEECTTCEEEC
T ss_pred CcEECCCEEEEeCCceEECCceeeCCCeEEEeCC---CeEECCceEEcCCcEEec
Confidence 5666666655 5555666666666555555433 358999999999999953
No 131
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.21 E-value=9.1e-11 Score=120.23 Aligned_cols=110 Identities=12% Similarity=0.156 Sum_probs=70.3
Q ss_pred ccCCCceeCCCCEeCCCcEECCCCEECCCCEECCCCeEee----------------------------------eEECCC
Q 012817 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----------------------------------SVIGRH 386 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~----------------------------------s~Ig~~ 386 (456)
++.....|++.+.|++++.+.+++.++.+|.|++++.+.+ ++|+++
T Consensus 279 ~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~ 358 (501)
T 3st8_A 279 WIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGAD 358 (501)
T ss_dssp EECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTT
T ss_pred cccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccc
Confidence 4456677777788877777777777777777766655432 344455
Q ss_pred CEECCCcEEeCeEECCCCEECCCcEEcCeEECCCCEECCCcEec--------CeEECCCCEECCCcEEcCCe
Q 012817 387 CRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALK--------DCQVGQGYVVSAGCEYKGES 450 (456)
Q Consensus 387 ~~ig~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~~~I~~~~~i~--------~~~i~~~~~v~~~~~~~~~~ 450 (456)
|.||.+|.+.+|+|+++++|++.+.+++|+||++|.||+|+++. .++||+++.||.++.+....
T Consensus 359 v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v 430 (501)
T 3st8_A 359 GKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPV 430 (501)
T ss_dssp CEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSE
T ss_pred cccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCc
Confidence 55555555556666666666666666677777777777776652 26666666666665554433
No 132
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.20 E-value=7.6e-11 Score=118.48 Aligned_cols=134 Identities=14% Similarity=0.127 Sum_probs=93.4
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccC-CcchHHHHHHHHHHCCCC-----EEEEEecCchhhHHHHhhhh-h--h
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELSNIK-----DLIVVVEGADAALRVGGWIS-A--A 72 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~-gkpli~~~l~~l~~~gi~-----~v~iv~~~~~~~~~i~~~~~-~--~ 72 (456)
++-+||||||.|+|| ....||+|+|++ |||+|++.++++...+.. .++|.+... ..+.+.+|+. + +
T Consensus 75 k~avViLAGGlGTRL----g~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~-t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 75 STVVLKLNGGLGTGM----GLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFN-TSASTKSFLKARYPW 149 (505)
T ss_dssp TEEEEEEECCCCGGG----TCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHH-HHHHHHHHHHHHCHH
T ss_pred cceEEEEcCCccccc----CCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCC-CHHHHHHHHhhhhhc
Confidence 357899999999999 567999999999 999999999999876533 555665433 2346666665 3 2
Q ss_pred cc-CccceEEEE-----------------------ccCCcChHHHHHHH-----HhcC---CCCcEEEEcCCcccC-CCh
Q 012817 73 YV-DRLHVEVAT-----------------------VPEDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPP 119 (456)
Q Consensus 73 ~~-~~~~i~~~~-----------------------~~~~~gt~~al~~~-----~~~l---~~~~~lv~~~D~i~~-~~l 119 (456)
+. ..-++.+.. ...+.|+++++..+ ++.+ ..++++|.++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 21 100122110 11235898887644 2222 257899999998764 467
Q ss_pred hHHHHHHHhcCceEEEEEeecc
Q 012817 120 GAVTAAHRRHDAVVTAMICSVP 141 (456)
Q Consensus 120 ~~~l~~~~~~~a~~t~~~~~~~ 141 (456)
.++.+|.++++++++.+.+..
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~ 250 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRT 250 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECC
T ss_pred -HHHHHHHhcCCcEEEEEEEec
Confidence 899999999999998887654
No 133
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.20 E-value=3.6e-11 Score=113.92 Aligned_cols=87 Identities=20% Similarity=0.334 Sum_probs=53.4
Q ss_pred CceeCCCCEeCCCcEE--CCCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-----CeEECCCCEECCCcEEc-Ce
Q 012817 345 NNIIHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSIQ-GS 415 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-----~s~i~~~~~ig~~~~i~-~~ 415 (456)
...|+|++.||+++.| +.++.||++|.||++|.|.+ ++||+++.+++++.+. +++|+++|.||.+|.|. ++
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv 242 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNI 242 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSC
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCc
Confidence 4455566666555555 44455555555555554442 4444444444444443 34788888888888774 78
Q ss_pred EECCCCEECCCcEecC
Q 012817 416 VICSNAQLQERVALKD 431 (456)
Q Consensus 416 ii~~~~~I~~~~~i~~ 431 (456)
.||++|.||+|++|..
T Consensus 243 ~IG~~a~IGagsvV~~ 258 (313)
T 3q1x_A 243 IVGSHVRIGANCWIDR 258 (313)
T ss_dssp EECSSEEECTTCEECS
T ss_pred EECCCCEECCCCEECC
Confidence 8888888888887753
No 134
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.18 E-value=8.5e-11 Score=111.35 Aligned_cols=95 Identities=18% Similarity=0.316 Sum_probs=58.1
Q ss_pred CCCCEeCCCcEECCCCEE--CCCCEECCCCeEeeeEECCCCEECCCcEEe-CeEECCCCEECCCcEEcCeEECCCCEECC
Q 012817 349 HPSAELGSKTTVGPHCML--GEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQGSVICSNAQLQE 425 (456)
Q Consensus 349 ~~~~~i~~~~~i~~~~~i--~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~~~ii~~~~~I~~ 425 (456)
..++.|++++.||+++.| +.+++||++| .||++|.|+++++|+ ++.+++++.++.++. ..++||++|.||+
T Consensus 161 ~~gv~I~p~a~IG~~v~I~~g~gvvIG~~~-----~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~-~~~~IGd~v~IGa 234 (313)
T 3q1x_A 161 YTSIDIHPGASIKGHFFIDHGVGVVIGETA-----IIGEWCRIYQSVTLGAMHFQEEGGVIKRGTK-RHPTVGDYVTIGT 234 (313)
T ss_dssp HHCCEECTTCEECSSCEESSCTTCEECTTC-----EECSSCEECTTCEEECCCCCCTTCCCCCCSS-CSCEECSSCEECT
T ss_pred cCCeEECCCCEECCCEEECCCCceEECCCc-----EECCCCEECCCcEEeCCcEECCCceEcCCCc-cCCEECCCCEECC
Confidence 345555555555555555 3344444443 555566665555555 344555555544431 3468888888888
Q ss_pred CcEe-cCeEECCCCEECCCcEEcCC
Q 012817 426 RVAL-KDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 426 ~~~i-~~~~i~~~~~v~~~~~~~~~ 449 (456)
+++| .+++||++++||+|+.+...
T Consensus 235 ga~Ilggv~IG~~a~IGagsvV~~d 259 (313)
T 3q1x_A 235 GAKVLGNIIVGSHVRIGANCWIDRD 259 (313)
T ss_dssp TCEEESSCEECSSEEECTTCEECSC
T ss_pred CCEECCCcEECCCCEECCCCEECCC
Confidence 8865 46888888888888877543
No 135
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.16 E-value=9.6e-11 Score=104.62 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCCceeCCCCE--eCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe
Q 012817 343 AQNNIIHPSAE--LGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV 396 (456)
Q Consensus 343 ~~~~~i~~~~~--i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~ 396 (456)
+.++.|.|.+. ++.++.||+++.|+.+|.|.+.. ...||++|.||++|.|.
T Consensus 59 g~~~~I~~~~~~~~g~~i~IG~~~~I~~~~~i~~~~---~i~IG~~v~Ig~~v~I~ 111 (203)
T 1krr_A 59 GENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDY---TVTIGDNVLIAPNVTLS 111 (203)
T ss_dssp CSSCEECSCEEESCSTTEEECSSCEECSCEEEECSS---CEEECSSCEECSSCEEE
T ss_pred CCCcEEcCCeEEEeCCCeEECCeeEECCccEEeccc---ceEECCCCEECCCCEEe
Confidence 34566666643 34444555555555444444322 25899999999999886
No 136
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.15 E-value=3.3e-10 Score=99.60 Aligned_cols=83 Identities=23% Similarity=0.358 Sum_probs=50.4
Q ss_pred CceeCCCCE--eCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-------------------CeEECCC
Q 012817 345 NNIIHPSAE--LGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-------------------NSVVMNH 403 (456)
Q Consensus 345 ~~~i~~~~~--i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-------------------~s~i~~~ 403 (456)
+..|+|++. ++.++.||+++.|+++|.|.+.+ +..||++|.|+++|.|. +++|+++
T Consensus 58 ~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~---~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~ 134 (182)
T 1ocx_A 58 EAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVC---PIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNN 134 (182)
T ss_dssp SEEECSCEEESSSTTEEECSSEEECSSEEEECSS---CEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTT
T ss_pred CEEEeCCEEEEeCCCEEECCCcEEeCCeEEEecc---ceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCC
Confidence 566666633 45566666666666666554332 35899999999999984 3445555
Q ss_pred CEECCCcEEc-CeEECCCCEECCCcEec
Q 012817 404 VTIGDGCSIQ-GSVICSNAQLQERVALK 430 (456)
Q Consensus 404 ~~ig~~~~i~-~~ii~~~~~I~~~~~i~ 430 (456)
|.||.+|.|. ++.||++|+|+++++|.
T Consensus 135 v~Ig~~a~I~~gv~IG~~~vIgagsvV~ 162 (182)
T 1ocx_A 135 VWIGGRAVINPGVTIGDNVVVASGAVVT 162 (182)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCcEECCCCEECCCCEEC
Confidence 5555555553 55555555555555544
No 137
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.14 E-value=2.3e-10 Score=106.72 Aligned_cols=96 Identities=20% Similarity=0.232 Sum_probs=54.4
Q ss_pred CceeCCCCEeCCCcEEC--CCCEECCCCEECCCCeEeeeEECCCCEECCCcEE---eCeEECCCCEECCCcEEc-CeEEC
Q 012817 345 NNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKV---VNSVVMNHVTIGDGCSIQ-GSVIC 418 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i---~~s~i~~~~~ig~~~~i~-~~ii~ 418 (456)
++.|+|++.||+++.|+ .++.||++|.||++| .|+.+|.|+..... ++++|+++|.||.+|.|. +++||
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v-----~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG 238 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVEDNV-----SILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVG 238 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEECSSC-----EEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEEC
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEECCCC-----EEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEEC
Confidence 44555555555555554 344444444444443 33333333332111 136889999999998886 79999
Q ss_pred CCCEECCCcEecCeEECCCCEECCCcE
Q 012817 419 SNAQLQERVALKDCQVGQGYVVSAGCE 445 (456)
Q Consensus 419 ~~~~I~~~~~i~~~~i~~~~~v~~~~~ 445 (456)
++|+||++++|.+.+-....++|..++
T Consensus 239 ~~a~IGagsvV~kdVp~~svvvG~PAk 265 (287)
T 3mc4_A 239 QCSKIAAGSVVLKSVPHNVTVAGVPAR 265 (287)
T ss_dssp TTCEECTTCEECSCBCTTEEEETTTTE
T ss_pred CCCEECCCCEEccccCCCCEEEccCCE
Confidence 999999998887654333333344443
No 138
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.13 E-value=2e-10 Score=108.55 Aligned_cols=90 Identities=19% Similarity=0.331 Sum_probs=55.7
Q ss_pred CceeCCCCEeCCCcEE--CCCCEECCCCEECCCCeEeeeEECCCCEECCCcE-----------E-eCeEECCCCEECCCc
Q 012817 345 NNIIHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVK-----------V-VNSVVMNHVTIGDGC 410 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~-----------i-~~s~i~~~~~ig~~~ 410 (456)
...|+|++.||+++.| +.++.||++|.||++| .|+.+|.||.++. + ++.+|+++|.||.+|
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v-----~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga 264 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNV-----KLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNA 264 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSC-----EEETTCEEECC--------------CCSCEECTTCEECTTC
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCC-----EECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCC
Confidence 4556666666666666 5555555555555555 4455555555441 1 144788888888888
Q ss_pred EEc-CeEECCCCEECCCcEecCeEECCCCEE
Q 012817 411 SIQ-GSVICSNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 411 ~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v 440 (456)
.|. ++.||++|+||+|++|... |.++++|
T Consensus 265 ~Il~gv~IGd~a~IGagsvV~~d-Vp~~svv 294 (310)
T 3f1x_A 265 TILGRVTIGKGATVGGNIWVTEN-VPAGSRI 294 (310)
T ss_dssp EEESSCEECTTCEECSSCEECSC-BCTTCEE
T ss_pred EECCCcEECCCCEECCCCEECCc-cCCCcEE
Confidence 885 8888888888888877654 3444444
No 139
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.11 E-value=2.1e-10 Score=101.23 Aligned_cols=94 Identities=27% Similarity=0.369 Sum_probs=56.2
Q ss_pred CCceeCCCC--EeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEe-------------------CeEECC
Q 012817 344 QNNIIHPSA--ELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-------------------NSVVMN 402 (456)
Q Consensus 344 ~~~~i~~~~--~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~-------------------~s~i~~ 402 (456)
....|.+.. .++.++.||+++.|+.+|+|.+. .+..||++|.||++|.|. +++|++
T Consensus 59 ~~~~I~~p~~~~~g~~v~IG~~~~i~~~~~i~~~---~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd 135 (185)
T 2p2o_A 59 ERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDV---CEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGH 135 (185)
T ss_dssp SCEEECSCEEESCSTTEEECTTEEECSSEEEECS---SCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECS
T ss_pred CCcEEeccEEEEecCCEEECCeeEEcCCeEEEec---cceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcC
Confidence 345555543 33455555555555555555332 246899999999999994 345666
Q ss_pred CCEECCCcEEc-CeEECCCCEECCCcEecCeEECCCCEEC
Q 012817 403 HVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVGQGYVVS 441 (456)
Q Consensus 403 ~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v~ 441 (456)
+|.||.+|.|. ++.||++|+||+|++|... |+++++++
T Consensus 136 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~~-vp~~~vv~ 174 (185)
T 2p2o_A 136 NVWIGGRAVINPGVTIGDNAVIASGAVVTKD-VPANAVVG 174 (185)
T ss_dssp SCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred CeEECCCCEECCCCEECCCCEECCCCEECCC-CCCCcEEE
Confidence 66666666664 6666666666666666543 44555443
No 140
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.10 E-value=4.5e-10 Score=101.79 Aligned_cols=95 Identities=19% Similarity=0.259 Sum_probs=70.9
Q ss_pred ceeCCCCEeCCCcEECC---CCEECCCCEECCCCeE----eeeEECCCCEECCCcEEeCe--------------------
Q 012817 346 NIIHPSAELGSKTTVGP---HCMLGEGSQMGDKCSV----KRSVIGRHCRIGSNVKVVNS-------------------- 398 (456)
Q Consensus 346 ~~i~~~~~i~~~~~i~~---~~~i~~~~~I~~~~~i----~~s~Ig~~~~ig~~~~i~~s-------------------- 398 (456)
..|++.+.|++++.+.. ++.||++|.|++.+.+ .+++||++|.|+++|.|.++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 56666666666666642 4788888888884444 56899999999999999863
Q ss_pred EECCCCEECCCcEEc-CeEECCCCEECCCcEecCeEECCCCEEC
Q 012817 399 VVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVGQGYVVS 441 (456)
Q Consensus 399 ~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v~ 441 (456)
+|+++|.||.++.|. ++.|+++|.|++++++.+. |.+++++.
T Consensus 139 ~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~~-vp~~~i~~ 181 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYKS-FKEPNCVI 181 (215)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECTTCEECSC-CCCCSCEE
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEEcCc-cCCCeEEE
Confidence 788888888888775 7888888888888877654 46666655
No 141
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.10 E-value=3.7e-10 Score=106.69 Aligned_cols=92 Identities=13% Similarity=0.294 Sum_probs=41.2
Q ss_pred CCCCEeCCCcEECCCCEE--CCCCEECCCCeEeeeEECCCCEECCCcEEeCeE-ECCCCEECCC--cEEcCeEECCCCEE
Q 012817 349 HPSAELGSKTTVGPHCML--GEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSV-VMNHVTIGDG--CSIQGSVICSNAQL 423 (456)
Q Consensus 349 ~~~~~i~~~~~i~~~~~i--~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~-i~~~~~ig~~--~~i~~~ii~~~~~I 423 (456)
..++.|++++.||+++.| +.+++||+++ +||++|.|+++|+|++.. ..+.. |.. ..-..++||++|.|
T Consensus 188 ~~gv~I~p~a~IG~~v~I~hg~gvvIG~~~-----~IG~~v~I~~gvtIg~~~~~~~~~--g~~i~~~~~~~~IGd~V~I 260 (310)
T 3f1x_A 188 ETGIDIHPGAQIGHHFTIDHGTGVVIGATS-----IIGNNVKLYQGVTLGAKSFPLDNN--GNPIKGIPRHPILEDDVIV 260 (310)
T ss_dssp HHSCEECTTCEECSSCEEESCTTCEECTTC-----EECSSCEEETTCEEECC----------------CCSCEECTTCEE
T ss_pred cCCcEECCCCEECCCcEECCCCCeEECCce-----EEcCCCEECCCCEECCCccccccc--cccccCCCCCCEECCCcEE
Confidence 344455555555444444 3444444333 555555555555555221 11000 000 00123455555555
Q ss_pred CCCcEec-CeEECCCCEECCCcEEc
Q 012817 424 QERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 424 ~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
|++++|. +++||++++|++|+.+.
T Consensus 261 Gaga~Il~gv~IGd~a~IGagsvV~ 285 (310)
T 3f1x_A 261 YSNATILGRVTIGKGATVGGNIWVT 285 (310)
T ss_dssp CTTCEEESSCEECTTCEECSSCEEC
T ss_pred cCCCEECCCcEECCCCEECCCCEEC
Confidence 5555543 55666666666665554
No 142
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.08 E-value=3.4e-09 Score=106.74 Aligned_cols=193 Identities=11% Similarity=0.147 Sum_probs=118.1
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccC---CcchHHHHHHHHHHC--------C------CCEEEEEecCchhhHH
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS--------N------IKDLIVVVEGADAALR 64 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~---gkpli~~~l~~l~~~--------g------i~~v~iv~~~~~~~~~ 64 (456)
++.+|+||||.|+|| +...||+|+|++ |||++++.++++... | +..+++.+.+. .+.
T Consensus 103 kvavvlLaGG~GTRL----g~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t--~~~ 176 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRL----GSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT--RNA 176 (486)
T ss_dssp CEEEEEEEESBCGGG----TCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG--HHH
T ss_pred CeEEEEEcCCccccC----CCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC--HHH
Confidence 478999999999999 788999999999 999999999999875 5 55555555433 345
Q ss_pred HHhhhhhh--cc-CccceEEEEcc----------------------CCcChHHHHHHHHh-----cC---CCCcEEEEcC
Q 012817 65 VGGWISAA--YV-DRLHVEVATVP----------------------EDVGTAGALRAIAH-----HL---TAKDVLVVSG 111 (456)
Q Consensus 65 i~~~~~~~--~~-~~~~i~~~~~~----------------------~~~gt~~al~~~~~-----~l---~~~~~lv~~~ 111 (456)
+++++.+. +. ..-.+.+..|. .+.|+++....+.+ .+ .-+++.+...
T Consensus 177 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 177 TESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 66666542 21 11123222211 24578776654422 11 2356777777
Q ss_pred C-ccc-CCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecC-CCc-EEEEeecccccccc
Q 012817 112 D-LVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP-TKQ-FLLHIATGAELEKD 187 (456)
Q Consensus 112 D-~i~-~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~-~~~-~l~~~~~~~~~~k~ 187 (456)
| ++. ..| ..++..|.+.++++++.+.+... + ....|++.... +++ .++.+.+.+.
T Consensus 257 DN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~--~--------------~e~~Gvl~~~~~dg~~~vvEy~E~~~---- 315 (486)
T 2yqc_A 257 DNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRD--A--------------NESVGLIVLDQDNQKPCVIEYSEISQ---- 315 (486)
T ss_dssp TBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCS--T--------------TCCCCEEEEETTTTEEEEECGGGSCH----
T ss_pred CCceeeccC-HHHHHHHHHcCCCEEEEEEEcCC--C--------------CCceeEEEEEecCCCEEEEEEecCCH----
Confidence 7 333 334 35788999999999887665421 1 23567776542 444 3444433211
Q ss_pred cccchHHHhhcce--eEEecCCccceEEeechHHHHHHHh
Q 012817 188 TRIRKSILRAVGQ--MDIRADLMDAHMYAFNRSVLQEVLD 225 (456)
Q Consensus 188 ~~~~~~~~~~~~~--~~~~~~~~~~giYi~~~~vl~~~~~ 225 (456)
.... ...+. -....+..|+++|+|+.++|...+.
T Consensus 316 -~~~~---~~~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~ 351 (486)
T 2yqc_A 316 -ELAN---KKDPQDSSKLFLRAANIVNHYYSVEFLNKMIP 351 (486)
T ss_dssp -HHHH---CEETTEEEEESSCEEEEEEEEEEHHHHHHHHH
T ss_pred -HHhh---cccccccccccccceeEEEEEEeHHHHHHHHH
Confidence 0000 00010 1234567899999999999987443
No 143
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.08 E-value=4.6e-09 Score=102.32 Aligned_cols=192 Identities=9% Similarity=0.115 Sum_probs=119.7
Q ss_pred CceEEEEecCCCCCCcCCCCCCCccccccc---CCcchHHHHHHHHHH-------------CCCCEEEEEecCchhhHHH
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL-------------SNIKDLIVVVEGADAALRV 65 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi---~gkpli~~~l~~l~~-------------~gi~~v~iv~~~~~~~~~i 65 (456)
++-+|+||||.|+|| +...||+|+|+ .|||++++.++++.+ .++.-+ |.+.... .+.+
T Consensus 35 kvavvlLAGG~GTRL----G~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~-IMtS~~t-~e~t 108 (405)
T 3oc9_A 35 KTALITPAGGQGSRL----GFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWF-LMTNEET-IEEI 108 (405)
T ss_dssp CEEEEEECCSBCTTT----TCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEE-EEECTTT-HHHH
T ss_pred ceEEEEecCCCcccc----cCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEE-EEeCCcc-HHHH
Confidence 456899999999999 77899999999 899999999988854 345544 4444332 3467
Q ss_pred Hhhhhhhc--c-CccceEEEEc---------------------cCCcChHHHHHHHHhc-----C---CCCcEEEEcCCc
Q 012817 66 GGWISAAY--V-DRLHVEVATV---------------------PEDVGTAGALRAIAHH-----L---TAKDVLVVSGDL 113 (456)
Q Consensus 66 ~~~~~~~~--~-~~~~i~~~~~---------------------~~~~gt~~al~~~~~~-----l---~~~~~lv~~~D~ 113 (456)
.+++.+.. . +.-++.+..| ..+.|.++....+... + .-+++.+...|.
T Consensus 109 ~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 109 NNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 77775422 1 1112433321 1235777665543221 1 235788888897
Q ss_pred -ccCCChhHHHHHHHhcCceEEEEEeecccCCCccCCCCCCcccCCCCCcccEEEecCCCcEEEEeecccccccccccch
Q 012817 114 -VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRK 192 (456)
Q Consensus 114 -i~~~~l~~~l~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~d~~~~~l~~~~~~~~~~k~~~~~~ 192 (456)
+.......++.+|.+.++++++-+.+... | ....|++........++.+.+.+.. ...
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~--~--------------dek~Gvl~~~dg~~~vvEysei~~e-~e~---- 247 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKKGF--K--------------EEKVGVLVKEQERIKVVEYTELTDE-LNK---- 247 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEECCS--T--------------TCSCCEEEEETTEEEEECGGGCCTT-TTC----
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEECCC--C--------------CCccceEEEECCeeEEEEEeeCCHH-Hhh----
Confidence 88888888999999999999877765432 1 1356777643222234444432221 100
Q ss_pred HHHhhcceeEEecCCccceEEeechHHHHHHH
Q 012817 193 SILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (456)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~giYi~~~~vl~~~~ 224 (456)
+.+.-....+..|.++++|+.++|+.+.
T Consensus 248 ----~~~~g~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 248 ----QLSNGEFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp ----BCTTSCBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ----cCCCCceeeccceeEeeecCHHHHHHhh
Confidence 0000111234567889999999998875
No 144
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.05 E-value=8.1e-10 Score=100.38 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=18.1
Q ss_pred CCEECCCCeEee-eEECCCCEECCCcEE
Q 012817 369 GSQMGDKCSVKR-SVIGRHCRIGSNVKV 395 (456)
Q Consensus 369 ~~~I~~~~~i~~-s~Ig~~~~ig~~~~i 395 (456)
+|.|++++.|++ ++||++|.|+++++|
T Consensus 54 ~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i 81 (220)
T 4hur_A 54 DQVLYHYEVIGDKLIIGRFCSIGPGTTF 81 (220)
T ss_dssp GGEESCCTTTCCCEEECSSCEECTTCEE
T ss_pred CeEEeCCCEECCCeEECCCCEECCCCEE
Confidence 566666665554 577777777777775
No 145
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.04 E-value=5e-10 Score=108.13 Aligned_cols=54 Identities=20% Similarity=0.266 Sum_probs=36.9
Q ss_pred ccCCCceeCCCCEeCCCcEECCC-CEECCCCE-ECCCCeEeeeEECCCCEECCCcEEe
Q 012817 341 FSAQNNIIHPSAELGSKTTVGPH-CMLGEGSQ-MGDKCSVKRSVIGRHCRIGSNVKVV 396 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~-~~i~~~~~-I~~~~~i~~s~Ig~~~~ig~~~~i~ 396 (456)
.+++.+.|.+++.|++++.|+++ +.|+.++. ||+ |.|.. .|+++|.||++|.|+
T Consensus 219 ~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~nv~vIG~-~~I~~-~Ig~~vvIGdnv~Ig 274 (387)
T 2rij_A 219 RILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGA-CMVEG-RISSSAIVGEGSDVG 274 (387)
T ss_dssp EESCGGGBBTTCBCCTTCEECSSSCEECTTCEESSC-CEECS-EECTTCEECTTCEEC
T ss_pred EEcCCCEECCCeEEcCCCEEeCCeeEECCCcEEECC-EEEee-EECCCCEECCCCEEC
Confidence 45567777788888888888875 88888887 777 66643 555555555555555
No 146
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.04 E-value=2e-09 Score=99.70 Aligned_cols=85 Identities=22% Similarity=0.268 Sum_probs=52.6
Q ss_pred CceeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeC---------eEECCCCEECCCcEEc-C
Q 012817 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCSIQ-G 414 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~---------s~i~~~~~ig~~~~i~-~ 414 (456)
...|+|++.||+++.|+.+ .+++||++| +||++|.|+++++|++ ++|+++|.||.++.|. +
T Consensus 137 g~~I~p~a~IG~g~~I~~~----~~vvIG~~~-----~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~g 207 (267)
T 1ssq_A 137 DVDIHPAAKIGHGIMFDHA----TGIVVGETS-----VIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGN 207 (267)
T ss_dssp SCEECTTCEECSSCEESSC----TTCEECTTC-----EECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESS
T ss_pred ceEeCCCCEECCCEEECCC----CceEECCee-----EECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCC
Confidence 4556666666665555531 233333333 4444444455555543 5788888888888885 7
Q ss_pred eEECCCCEECCCcEecCeEECCCCE
Q 012817 415 SVICSNAQLQERVALKDCQVGQGYV 439 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~~~~i~~~~~ 439 (456)
++||++|+||+|++|... |.++++
T Consensus 208 v~IG~~a~IGagsvV~~d-Vp~~~~ 231 (267)
T 1ssq_A 208 IEVGKYAKIGANSVVLNP-VPEYAT 231 (267)
T ss_dssp CEECTTCEECTTCEECSC-BCTTCE
T ss_pred cEECCCCEECCCCEEccC-CCCCCE
Confidence 888888888888887654 344443
No 147
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.04 E-value=2.9e-10 Score=103.35 Aligned_cols=33 Identities=15% Similarity=0.297 Sum_probs=16.6
Q ss_pred eEECCCCEECCCcEec-CeEECCCCEECCCcEEc
Q 012817 415 SVICSNAQLQERVALK-DCQVGQGYVVSAGCEYK 447 (456)
Q Consensus 415 ~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~ 447 (456)
++||++|.||++++|. +++||++++|++++.+.
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 4455555555555443 45555555555555443
No 148
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.04 E-value=7.7e-10 Score=98.53 Aligned_cols=91 Identities=13% Similarity=0.085 Sum_probs=51.6
Q ss_pred cCCCceeCCCCEeCCCcEEC--CCCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeE
Q 012817 342 SAQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSV 416 (456)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~i 416 (456)
++.+..|++++.|++++.|. ..+.||++|.|+++|.|.. +...+.+....++.+. +++|+++|.||.+|.|. ++.
T Consensus 73 ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~ 152 (195)
T 3nz2_A 73 FGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVT 152 (195)
T ss_dssp CSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCE
T ss_pred eCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCE
Confidence 34455555555555555552 2345666666666665553 3333333333444444 55666777777776664 667
Q ss_pred ECCCCEECCCcEecCe
Q 012817 417 ICSNAQLQERVALKDC 432 (456)
Q Consensus 417 i~~~~~I~~~~~i~~~ 432 (456)
||++|+||++++|...
T Consensus 153 IG~~~vIgagsvV~~d 168 (195)
T 3nz2_A 153 IGARSVVAANSVVNQD 168 (195)
T ss_dssp ECTTCEECTTCEECSC
T ss_pred ECCCCEECCCCEEccc
Confidence 7777777777666544
No 149
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.04 E-value=4e-10 Score=113.96 Aligned_cols=95 Identities=21% Similarity=0.268 Sum_probs=78.2
Q ss_pred eeCCCCEeCCCcEECCCCEECCCCEECCCCeEeeeEECCCCEECCCcEEeCeEECCCCEECCCcEEcCeEECCC------
Q 012817 347 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSN------ 420 (456)
Q Consensus 347 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~i~~s~i~~~~~ig~~~~i~~~ii~~~------ 420 (456)
+++|.+.|++++.|+ +++.| .++.|.++.||++|.|+. +.|.+++|+++|.||++|.|.++++..+
T Consensus 304 ~~~~~~~i~~~~~i~------~~~~i-~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~ 375 (451)
T 1yp2_A 304 FYDRSAPIYTQPRYL------PPSKM-LDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETD 375 (451)
T ss_dssp SCCSSSCCCCCCCCC------CCEEE-EEEEEEEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCH
T ss_pred ccCCCCeeccCCccC------CCeEE-cceEEeCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCcccc
Confidence 445555555555444 44444 456777789999999997 8999999999999999999998887777
Q ss_pred -------------CEECCCcEecCeEECCCCEECCCcEEcCC
Q 012817 421 -------------AQLQERVALKDCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 421 -------------~~I~~~~~i~~~~i~~~~~v~~~~~~~~~ 449 (456)
+.||+++.|.+++||+++.||+++.+.+.
T Consensus 376 ~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~ 417 (451)
T 1yp2_A 376 ADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINK 417 (451)
T ss_dssp HHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECCS
T ss_pred cccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeCC
Confidence 99999999999999999999999998875
No 150
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.03 E-value=7.1e-10 Score=98.38 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=41.1
Q ss_pred CCceeCCCCEeCCCcEECC--CCEECCCCEECCCCeEee-eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEEC
Q 012817 344 QNNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVIC 418 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~i~~-s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii~ 418 (456)
.+..|++.+.|++++.|.+ ++.||++|.|+++|.|.. +..++.+....++.+. +++|+++|.||.+|.|. ++.||
T Consensus 77 ~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 156 (190)
T 3hjj_A 77 YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIG 156 (190)
T ss_dssp TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEEC
T ss_pred CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEEC
Confidence 3444444444444444433 334555555555554432 2222222223333333 34455555555555554 55555
Q ss_pred CCCEECCCcEecC
Q 012817 419 SNAQLQERVALKD 431 (456)
Q Consensus 419 ~~~~I~~~~~i~~ 431 (456)
++|+||++++|.+
T Consensus 157 ~~~vIgagsvV~~ 169 (190)
T 3hjj_A 157 DNAVIASGAVVTK 169 (190)
T ss_dssp TTCEECTTCEECS
T ss_pred CCCEECCCCEECc
Confidence 5555555555543
No 151
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.01 E-value=2.9e-09 Score=99.50 Aligned_cols=90 Identities=19% Similarity=0.242 Sum_probs=53.7
Q ss_pred CceeCCCCEeCCCcEECC--CCEECCCCEECCCCeEeeeEECCCCEECCCcE---EeCeEECCCCEECCCcEEc-CeEEC
Q 012817 345 NNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVK---VVNSVVMNHVTIGDGCSIQ-GSVIC 418 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~i~~s~Ig~~~~ig~~~~---i~~s~i~~~~~ig~~~~i~-~~ii~ 418 (456)
...|+|++.||+++.|+. ++.||++|+||++| .|+.+|+||.... ..+++|+++|.||.++.|. ++.||
T Consensus 157 g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v-----~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG 231 (289)
T 1t3d_A 157 QVDIHPAAKIGRGIMLDHATGIVVGETAVIENDV-----SILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVG 231 (289)
T ss_dssp SCEECTTCEECSSCEECSCTTCEECTTCEECSSC-----EECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEEC
T ss_pred ceEEcCCCEEcCCEEECCCCceEECCCcEECCCC-----EEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEEC
Confidence 456666666666666653 44444444444443 3333444333211 1136788888888888885 78888
Q ss_pred CCCEECCCcEecCeEECCCCEE
Q 012817 419 SNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 419 ~~~~I~~~~~i~~~~i~~~~~v 440 (456)
++|+||+|++|... |.+++++
T Consensus 232 ~~a~IGagsvV~~d-Vp~~s~v 252 (289)
T 1t3d_A 232 RGAKIGAGSVVLQP-VPPHTTA 252 (289)
T ss_dssp TTCEECTTCEECSC-BCTTCEE
T ss_pred CCCEECCCCEEccC-CCCCCEE
Confidence 88888888877654 3444443
No 152
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.01 E-value=1.4e-09 Score=96.30 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=21.5
Q ss_pred CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcCC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKGE 449 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~~ 449 (456)
.++||++|.||.+++|. +++||++++|++|+.+...
T Consensus 132 ~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 132 PVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp CEEECSSCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred CcEECCCcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 45566666666666553 5666666666666665543
No 153
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.00 E-value=1.2e-09 Score=97.70 Aligned_cols=34 Identities=12% Similarity=0.250 Sum_probs=13.7
Q ss_pred CceeCCCCEeCCCcEEC--CCCEECCCCEECCCCeE
Q 012817 345 NNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSV 378 (456)
Q Consensus 345 ~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~i 378 (456)
+..|++++.|++++.|. ..+.||++|.|+++|.|
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I 109 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGF 109 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEE
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEE
Confidence 33344444444444432 12344444444444444
No 154
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.95 E-value=1.8e-09 Score=99.93 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=46.1
Q ss_pred ccCCCceeCCCCEeC--CCcEECCCCEECCCCEECCCCeEee---------eEECCCCEECCCcEEe-CeEECCCCEECC
Q 012817 341 FSAQNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVKR---------SVIGRHCRIGSNVKVV-NSVVMNHVTIGD 408 (456)
Q Consensus 341 ~~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~i~~---------s~Ig~~~~ig~~~~i~-~s~i~~~~~ig~ 408 (456)
.+++.+.|++++.|+ .++.||++|.||++|.|+.+++|+. ++||++|.||.+++|. +++|+++|.||.
T Consensus 139 ~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGa 218 (267)
T 1ssq_A 139 DIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGA 218 (267)
T ss_dssp EECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred EeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECC
Confidence 345666777777776 4667777777777777777777764 3566666666666654 444555555555
Q ss_pred CcEEc
Q 012817 409 GCSIQ 413 (456)
Q Consensus 409 ~~~i~ 413 (456)
+++|.
T Consensus 219 gsvV~ 223 (267)
T 1ssq_A 219 NSVVL 223 (267)
T ss_dssp TCEEC
T ss_pred CCEEc
Confidence 55554
No 155
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.92 E-value=2.6e-09 Score=99.82 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=25.1
Q ss_pred CCCCcEE--EEcCCcccCCChhHHHHHHHhcC
Q 012817 101 LTAKDVL--VVSGDLVSDVPPGAVTAAHRRHD 130 (456)
Q Consensus 101 l~~~~~l--v~~~D~i~~~~l~~~l~~~~~~~ 130 (456)
...|++| ++++|.+...+|.+.+.+|...+
T Consensus 37 ~~~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 37 ADCEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HHHCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred HhcCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 4457888 88999999999999999987753
No 156
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.90 E-value=1.1e-08 Score=91.35 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=49.6
Q ss_pred CCCceeCCCCEeCCCcEECC--CCEECCCCEECCCCeEeee-EECCCCEECCCcEEe-CeEECCCCEECCCcEEc-CeEE
Q 012817 343 AQNNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVKRS-VIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVI 417 (456)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~i~~s-~Ig~~~~ig~~~~i~-~s~i~~~~~ig~~~~i~-~~ii 417 (456)
+.+..|++++.|+.++.|.. .+.||++|.|+++|.|..+ ...+......+..+. +++|+++|.||.+|.|. ++.|
T Consensus 73 g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~I 152 (203)
T 1krr_A 73 GSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTI 152 (203)
T ss_dssp STTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEE
Confidence 34445555555555544432 2556666666666665431 111111112222233 45566666666666664 6666
Q ss_pred CCCCEECCCcEecCeEECCCCE
Q 012817 418 CSNAQLQERVALKDCQVGQGYV 439 (456)
Q Consensus 418 ~~~~~I~~~~~i~~~~i~~~~~ 439 (456)
|++|+||+|++|... |.++++
T Consensus 153 G~~~vIgagsvV~~d-vp~~~v 173 (203)
T 1krr_A 153 GDNSVIGAGSIVTKD-IPPNVV 173 (203)
T ss_dssp CTTCEECTTCEECSC-BCTTEE
T ss_pred CCCCEECCCCEECCC-cCCCcE
Confidence 666666666666543 344444
No 157
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.89 E-value=3.7e-09 Score=92.81 Aligned_cols=15 Identities=7% Similarity=0.295 Sum_probs=6.6
Q ss_pred CEECCCCEECCCCeE
Q 012817 364 CMLGEGSQMGDKCSV 378 (456)
Q Consensus 364 ~~i~~~~~I~~~~~i 378 (456)
+.||++|.|+++|.|
T Consensus 93 i~IG~~v~Ig~~v~I 107 (182)
T 1ocx_A 93 IRIGDNCMLAPGVHI 107 (182)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEEcCCcEEeCCcEE
Confidence 334444444444444
No 158
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.83 E-value=1.7e-08 Score=88.79 Aligned_cols=35 Identities=9% Similarity=0.055 Sum_probs=15.7
Q ss_pred CCceeCCCCEeCCCcEEC--CCCEECCCCEECCCCeE
Q 012817 344 QNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSV 378 (456)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~i 378 (456)
.+..|++.+.|++++.|. .++.||++|.|+++|.|
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I 109 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHI 109 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEE
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEE
Confidence 334444444444444332 33445555555555544
No 159
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.76 E-value=7.9e-09 Score=93.28 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=14.9
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK 430 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~ 430 (456)
++|+++|.||.+|.|. ++.||++|+||++++|.
T Consensus 112 v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 112 TIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 3444444444444443 44444444444444443
No 160
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.72 E-value=2.7e-08 Score=89.81 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=22.5
Q ss_pred CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+++||++|.||.+++|. ++.||++++|++++.+..
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 56666666666666554 566666666666666543
No 161
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.71 E-value=3.1e-08 Score=89.44 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=16.9
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK 430 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~ 430 (456)
++|+++|.||.+|.|. ++.||+++.|+++++|.
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 4455555555555553 45555555555555444
No 162
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.71 E-value=3.7e-08 Score=88.82 Aligned_cols=15 Identities=47% Similarity=0.769 Sum_probs=7.7
Q ss_pred eEECCCCEECCCcEE
Q 012817 381 SVIGRHCRIGSNVKV 395 (456)
Q Consensus 381 s~Ig~~~~ig~~~~i 395 (456)
..||++|.|+++|.|
T Consensus 59 v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 59 LVIGSFCSIGSGAVF 73 (212)
T ss_dssp EEECSSCEECTTCEE
T ss_pred cEECCCCEECCCCEE
Confidence 355555555555544
No 163
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.62 E-value=7.3e-08 Score=86.49 Aligned_cols=35 Identities=14% Similarity=0.314 Sum_probs=19.7
Q ss_pred CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
.++||++|.||.+++|. +++||++++|++++.+..
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 45566666666655543 555566666655555543
No 164
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.62 E-value=2.4e-08 Score=89.58 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=15.9
Q ss_pred eEECCCCEECCCcEEc-CeEECCCCEECCCcEec
Q 012817 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK 430 (456)
Q Consensus 398 s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~ 430 (456)
++|+++|.||.++.|. ++.||+++.|++++++.
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~ 147 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVV 147 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEc
Confidence 4444555555544443 44455555555444443
No 165
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.49 E-value=7.5e-08 Score=86.35 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=23.8
Q ss_pred CeEECCCCEECCCcEec-CeEECCCCEECCCcEEcC
Q 012817 414 GSVICSNAQLQERVALK-DCQVGQGYVVSAGCEYKG 448 (456)
Q Consensus 414 ~~ii~~~~~I~~~~~i~-~~~i~~~~~v~~~~~~~~ 448 (456)
+++||++|.||.+++|. ++.||++++|++++.+..
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~ 148 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVK 148 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 56677777777777664 577777777777766654
No 166
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.36 E-value=1.1e-06 Score=78.72 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=24.0
Q ss_pred CeEECCCCEECCCcEEc-CeEECCCCEECCCcEecCeEECCCCEE
Q 012817 397 NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVGQGYVV 440 (456)
Q Consensus 397 ~s~i~~~~~ig~~~~i~-~~ii~~~~~I~~~~~i~~~~i~~~~~v 440 (456)
.++|+++|.||.+|.|. ++.||++|.||+++++... |.+++++
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~-vp~~~~~ 153 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGD-VEPYAIV 153 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEccc-CCCCcEE
Confidence 35566666666666664 5666666666666655543 3444433
No 167
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.88 E-value=0.0012 Score=66.11 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=48.0
Q ss_pred CceEEEEecCCCCCCcCCCCCCCcccccccC-CcchHHHHHHHHHHC----CC-CEEEEEecCchhhHHHHhhhhh
Q 012817 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NI-KDLIVVVEGADAALRVGGWISA 71 (456)
Q Consensus 2 ~~~aiIlagG~g~rl~pl~~~~~pK~llpi~-gkpli~~~l~~l~~~----gi-~~v~iv~~~~~~~~~i~~~~~~ 71 (456)
++-+|+||||.|+|| +...||.++|+. |+++++..++++... |. --.+|.++... .+...+++.+
T Consensus 127 kvavvlLaGGlGTRL----G~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T-~~~T~~~f~k 197 (528)
T 3r3i_A 127 KLVVVKLNGGLGTSM----GCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNT-DEDTKKILQK 197 (528)
T ss_dssp TEEEEEECCCBCTTT----TCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHSSCGG
T ss_pred ceEEEEeCCCCcccc----CCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccch-hHHHHHHHHh
Confidence 356799999999999 888999999996 899999999998654 42 24455555432 3456666654
No 168
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.64 E-value=6.6e-05 Score=67.23 Aligned_cols=104 Identities=17% Similarity=0.176 Sum_probs=74.0
Q ss_pred CceEEEEe--cCCCCCCcCCCCCCCcccccccCCcchHHHHHHHHHHCCCCEE-EEEecCchhhHHHHhhhhhhccCccc
Q 012817 2 DFQVVVLA--GGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDL-IVVVEGADAALRVGGWISAAYVDRLH 78 (456)
Q Consensus 2 ~~~aiIla--gG~g~rl~pl~~~~~pK~llpi~gkpli~~~l~~l~~~gi~~v-~iv~~~~~~~~~i~~~~~~~~~~~~~ 78 (456)
+|.+||++ |...|||.|. .........++||++|+++.+..++++.+ ++++++.. ...+ +.
T Consensus 3 ~~~~vip~k~g~~KtRL~~~----l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~----~~~~--------~~ 66 (211)
T 2i5e_A 3 AMRAVIPYKKAGAKSRLSPV----LSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG----LEEM--------TE 66 (211)
T ss_dssp CCEEEEECCCTTTTGGGTTT----SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT----CSSC--------CS
T ss_pred ceEEEEEeCCCCCccccCcc----CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH----HHhh--------cC
Confidence 47899999 7777888432 23333346679999999999999988888 88876432 1111 23
Q ss_pred eEEEEccCCcChHHHHHHHHhcCCCCcEEEEcCC--cccCCChhHHHH
Q 012817 79 VEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTA 124 (456)
Q Consensus 79 i~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~~D--~i~~~~l~~~l~ 124 (456)
+.++.++ .|.+++++.+.+.+ .+.++++.|| ++....++.+++
T Consensus 67 ~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 67 ARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 5555444 88899999988776 4789999999 566666777765
No 169
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=96.07 E-value=0.26 Score=48.87 Aligned_cols=133 Identities=15% Similarity=0.132 Sum_probs=78.1
Q ss_pred ceEEEEecCCCCCCcCCCCCCCccccccc-CCcchHHHHHHHHHH----CCC-CEEEEEecCchhhHHHHhhhhhh--cc
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPV-ANRPVLSYVLEQLEL----SNI-KDLIVVVEGADAALRVGGWISAA--YV 74 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi-~gkpli~~~l~~l~~----~gi-~~v~iv~~~~~~~~~i~~~~~~~--~~ 74 (456)
+-+|.||||.|+|| +...||.++|+ .|+++++..++++.. .+. --.+|.++... .+...+++.++ +.
T Consensus 77 vavvlLaGGlGTRL----G~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T-~~~T~~~~~k~~~Fg 151 (484)
T 3gue_A 77 AVVLKLNGGLGTGM----GLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFST-SGETKNFLRKYPTLY 151 (484)
T ss_dssp EEEEEEECCCCGGG----TCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHHHGGGCHHHH
T ss_pred cEEEEEcCCccccc----CCCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcch-hHHHHHHHHhCcccC
Confidence 45789999999999 88899999999 678999999888754 232 24566665432 23455555432 11
Q ss_pred -CccceEEEEc-----------------cC------CcChHH---HHHHH--HhcC---CCCcEEEEcCCcccCCChhHH
Q 012817 75 -DRLHVEVATV-----------------PE------DVGTAG---ALRAI--AHHL---TAKDVLVVSGDLVSDVPPGAV 122 (456)
Q Consensus 75 -~~~~i~~~~~-----------------~~------~~gt~~---al~~~--~~~l---~~~~~lv~~~D~i~~~~l~~~ 122 (456)
..-.+.+..| .. +.|.++ +|+.. ++.+ .-+++.+...|.+....=-.+
T Consensus 152 l~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~ 231 (484)
T 3gue_A 152 EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRL 231 (484)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHH
T ss_pred CCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHH
Confidence 1001111111 00 124333 22211 1222 235777778886544333457
Q ss_pred HHHHHhcCceEEEEEeec
Q 012817 123 TAAHRRHDAVVTAMICSV 140 (456)
Q Consensus 123 l~~~~~~~a~~t~~~~~~ 140 (456)
+-++.+.++++.+-+.+.
T Consensus 232 lG~~~~~~~d~~~kvv~K 249 (484)
T 3gue_A 232 LDYMHEKQLGFLMEVCRR 249 (484)
T ss_dssp HHHHHHTTCSEEEEEEEC
T ss_pred HHHHHhcCCCEEEEEEEC
Confidence 888888889877665543
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=95.69 E-value=0.0097 Score=60.69 Aligned_cols=64 Identities=22% Similarity=0.283 Sum_probs=48.2
Q ss_pred ceEEEEecCCCCCCcCCCCCCCcccccccC---CcchHHHHHHHHHH-CCC-CEEEEEecCchhhHHHHhhhhh
Q 012817 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLEL-SNI-KDLIVVVEGADAALRVGGWISA 71 (456)
Q Consensus 3 ~~aiIlagG~g~rl~pl~~~~~pK~llpi~---gkpli~~~l~~l~~-~gi-~~v~iv~~~~~~~~~i~~~~~~ 71 (456)
+-+|+||||.|+|| +...||.++|++ |++++++.++++.+ .|. --.+|.++... .+...+++.+
T Consensus 115 vavvllaGGlGTRL----G~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T-~~~T~~~~~~ 183 (630)
T 3ogz_A 115 TVFVLVAGGLGERL----GYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDT-HDRTLQLLRE 183 (630)
T ss_dssp EEEEEECCCEEGGG----TEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTT-HHHHHHHHHH
T ss_pred ceEEEecCCccccc----CCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccc-hHHHHHHHHH
Confidence 45799999999999 888999999997 99999999999975 343 24556665432 3455666655
No 171
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=87.80 E-value=4.8 Score=35.75 Aligned_cols=93 Identities=8% Similarity=0.016 Sum_probs=58.1
Q ss_pred cchHHHHHHHHHHCCCC--EEEEEecCchhhHHHHhhhhhhccCccceEEEEcc--------CCcChHHHHHHHHhcCCC
Q 012817 34 RPVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVP--------EDVGTAGALRAIAHHLTA 103 (456)
Q Consensus 34 kpli~~~l~~l~~~gi~--~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~--------~~~gt~~al~~~~~~l~~ 103 (456)
...|..+|+.+.+.... +++|+-+... +...+.+.+... ...+.++..+ ...|.+.+.-.+++....
T Consensus 13 ~~~l~~~l~Sl~~q~~~~~eiivvDd~S~--d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g 89 (255)
T 1qg8_A 13 SDYVAKSISSILSQTFSDFELFIMDDNSN--EETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEG 89 (255)
T ss_dssp TTTHHHHHHHHHTCSCCCEEEEEEECSCC--HHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhccCCceEEEEEECCCC--chHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHHHHHHcCC
Confidence 36788899998765433 5555543221 112222222111 2346777665 567888888778887777
Q ss_pred CcEEEEcCCccc-CCChhHHHHHHHhc
Q 012817 104 KDVLVVSGDLVS-DVPPGAVTAAHRRH 129 (456)
Q Consensus 104 ~~~lv~~~D~i~-~~~l~~~l~~~~~~ 129 (456)
+.++++.+|.+. +..+..+++.+.+.
T Consensus 90 ~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 90 EYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp SEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred CEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 789999999544 44588888887765
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=85.37 E-value=2.5 Score=37.27 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=62.8
Q ss_pred cccCC-cchHHHHHHHHHHCCCC--EEEEEecCc-hh-hHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHhcCCC
Q 012817 29 LPVAN-RPVLSYVLEQLELSNIK--DLIVVVEGA-DA-ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTA 103 (456)
Q Consensus 29 lpi~g-kpli~~~l~~l~~~gi~--~v~iv~~~~-~~-~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~~l~~ 103 (456)
+|.-+ ...|..+|+.+.+.... +++|+-+.. +. .+.++++.... ..+.++. .+..|.+.+.-.+++....
T Consensus 11 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~----~~i~~i~-~~n~G~~~a~N~g~~~a~g 85 (240)
T 3bcv_A 11 VPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY----PNIKVIH-KKNAGLGMACNSGLDVATG 85 (240)
T ss_dssp EEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC----SSEEEEE-CCCCCHHHHHHHHHHHCCS
T ss_pred EecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC----CCEEEEE-CCCCChHHHHHHHHHHcCC
Confidence 34333 35788999998765433 566654321 11 22344433221 1355554 4568888888888888777
Q ss_pred CcEEEEcCCcccCC-ChhHHHHHHHhcCceEE
Q 012817 104 KDVLVVSGDLVSDV-PPGAVTAAHRRHDAVVT 134 (456)
Q Consensus 104 ~~~lv~~~D~i~~~-~l~~~l~~~~~~~a~~t 134 (456)
+.++++..|.+... -|+.+++.+.+.+.++.
T Consensus 86 ~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v 117 (240)
T 3bcv_A 86 EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAV 117 (240)
T ss_dssp SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEE
T ss_pred CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 78899999955544 48888888777666654
No 173
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=83.98 E-value=2.3 Score=38.25 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=56.7
Q ss_pred cchHHHHHHHHHHCCCCEEEEEecCchhhHHH--HhhhhhhccCccceEEEEccCCcChHHHHHHHHhcC---CCCcEEE
Q 012817 34 RPVLSYVLEQLELSNIKDLIVVVEGADAALRV--GGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL---TAKDVLV 108 (456)
Q Consensus 34 kpli~~~l~~l~~~gi~~v~iv~~~~~~~~~i--~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~~l---~~~~~lv 108 (456)
++|+.++++.+...+...++++++.... ... ..+.. ..+.+.. ....|.+.+|..+...+ ..+.+++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~-~~~~~~~~~~------~~~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vli 108 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDAD-LPEKFKAWLG------PQHMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVL 108 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTT-HHHHHHHHHC------TTSEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchh-hhhhhhhhcc------CCcEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 4899999999998887766666553321 112 33221 1233332 23468888888887654 2356999
Q ss_pred EcCC--cccCCChhHHHHHHHh
Q 012817 109 VSGD--LVSDVPPGAVTAAHRR 128 (456)
Q Consensus 109 ~~~D--~i~~~~l~~~l~~~~~ 128 (456)
+.+| .+...+|..+++.+..
T Consensus 109 igaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 109 MGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp ECSSCTTCCHHHHHHHHHHTTT
T ss_pred EcCCCCCCCHHHHHHHHHHhcc
Confidence 9999 6777788888876554
No 174
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=79.64 E-value=10 Score=37.36 Aligned_cols=102 Identities=10% Similarity=0.080 Sum_probs=67.0
Q ss_pred cccCCc--chHHHHHHHHHHCCC----CEEEEEecCch---hhHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHh
Q 012817 29 LPVANR--PVLSYVLEQLELSNI----KDLIVVVEGAD---AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (456)
Q Consensus 29 lpi~gk--pli~~~l~~l~~~gi----~~v~iv~~~~~---~~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~ 99 (456)
+|.-+. ..|..+|+.+.+... .+|+||-+... ..+.++++.... ...+.++..+...|.+.+.-.+++
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~---~~~v~vi~~~~n~G~~~a~N~g~~ 111 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL---KVPVHVIRMEQRSGLIRARLKGAA 111 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS---SSCEEEEECSSCCCHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC---CCcEEEEECCCCCChHHHHHHHHH
Confidence 565565 589999999977542 26777754221 122344443321 113677766667898888888888
Q ss_pred cCCCCcEEEEcCCccc-CCChhHHHHHHHhcCceE
Q 012817 100 HLTAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVV 133 (456)
Q Consensus 100 ~l~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~a~~ 133 (456)
....+.++++..|... +.-|+.+++.+.+....+
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 7777789999999544 456888998887665443
No 175
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=74.55 E-value=13 Score=37.84 Aligned_cols=99 Identities=9% Similarity=0.039 Sum_probs=64.8
Q ss_pred cccCCc--chHHHHHHHHHHCCC-C---EEEEEecCc--hh-hHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHh
Q 012817 29 LPVANR--PVLSYVLEQLELSNI-K---DLIVVVEGA--DA-ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (456)
Q Consensus 29 lpi~gk--pli~~~l~~l~~~gi-~---~v~iv~~~~--~~-~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~ 99 (456)
+|.-+. ..|..+|+.+.+... . +|+||-+.. .. .+.++++.... ..+.++..+...|.+.+.-.+++
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~----~~v~vi~~~~n~G~~~A~N~G~~ 193 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF----PSVRILRTKKREGLIRTRMLGAS 193 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS----TTEEEEECSSCCCHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC----CeEEEEECCCCCCHHHHHHHHHH
Confidence 555665 488899988865432 2 677775422 11 22344443321 24777766677899998888888
Q ss_pred cCCCCcEEEEcCCccc-CCChhHHHHHHHhcCc
Q 012817 100 HLTAKDVLVVSGDLVS-DVPPGAVTAAHRRHDA 131 (456)
Q Consensus 100 ~l~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~a 131 (456)
....+.++++..|... +.-|+.+++...+...
T Consensus 194 ~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 194 VATGDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred hcCCCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 7776778999999544 4568889988776543
No 176
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=67.44 E-value=23 Score=35.14 Aligned_cols=100 Identities=11% Similarity=0.038 Sum_probs=64.5
Q ss_pred ccccCCc-c-hHHHHHHHHHHCCC-C---EEEEEecCchhhHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHhcC
Q 012817 28 LLPVANR-P-VLSYVLEQLELSNI-K---DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL 101 (456)
Q Consensus 28 llpi~gk-p-li~~~l~~l~~~gi-~---~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~~l 101 (456)
.+|.-+. . .|..+|+.+.+... . +|+||=+.... ..+...+... ..+.++..+...|.+.+.-.+++..
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D-~t~~~~~~~~----~~v~vi~~~~n~G~~~A~N~G~~~A 145 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSND-PEDGALLGKI----EKVRVLRNDRREGLMRSRVRGADAA 145 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSC-THHHHGGGGB----TTEEEEECSSCCHHHHHHHHHHHHC
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCc-hHHHHHHhcC----CCEEEEECCCCcCHHHHHHHHHHhc
Confidence 3566665 3 79999998865432 2 67776542211 1222222221 2366776666788888888888887
Q ss_pred CCCcEEEEcCCc-ccCCChhHHHHHHHhcCce
Q 012817 102 TAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAV 132 (456)
Q Consensus 102 ~~~~~lv~~~D~-i~~~~l~~~l~~~~~~~a~ 132 (456)
..+.++++.+|. +.+.-|..+++.+.+....
T Consensus 146 ~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 146 QAKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp CSSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CCCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 767788889995 4455699999988776554
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=53.75 E-value=40 Score=34.39 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=59.5
Q ss_pred cccCC-cchHHHHHHHHHHCCCC--EEEEEecCc-h-hhHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHhcCCC
Q 012817 29 LPVAN-RPVLSYVLEQLELSNIK--DLIVVVEGA-D-AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTA 103 (456)
Q Consensus 29 lpi~g-kpli~~~l~~l~~~gi~--~v~iv~~~~-~-~~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~~l~~ 103 (456)
+|.-+ ...|..+|+.+.+.... +++|+-+.. + ..+.++++... ...+.++. ....|.+.++-.+++....
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~----~~~i~~~~-~~n~G~~~a~n~g~~~a~g 455 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYAN----HPRVRFIS-QKNKGIGSASNTAVRLCRG 455 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTT----CTTEEEEE-ECCCCHHHHHHHHHHHCCS
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhh----CCcEEEEe-CCCCCHHHHHHHHHHhcCC
Confidence 44444 47999999999765332 566654322 1 12234443322 11355553 4567888888888887776
Q ss_pred CcEEEEcCCcccC-CChhHHHHHHHhc
Q 012817 104 KDVLVVSGDLVSD-VPPGAVTAAHRRH 129 (456)
Q Consensus 104 ~~~lv~~~D~i~~-~~l~~~l~~~~~~ 129 (456)
+.++++.+|.+.. ..|..+++.+.+.
T Consensus 456 ~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 456 FYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp SEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred CEEEEECCCcccChhHHHHHHHHHHhC
Confidence 7788999995544 4488888776554
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=48.07 E-value=1.1e+02 Score=31.04 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=61.7
Q ss_pred ccccCCc-chHHHHHHHHHHCC---CCEEEEEecCchhhHHHHhhhhhhccCccceEEEEccCC-cChHHHHHHHHhcCC
Q 012817 28 LLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPED-VGTAGALRAIAHHLT 102 (456)
Q Consensus 28 llpi~gk-pli~~~l~~l~~~g---i~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~-~gt~~al~~~~~~l~ 102 (456)
++|.-+. ..|..+|+.+.... --+++|+-+.... ...+.+.+. .....+.++..+.. .|.+.++-.+++...
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d--~t~~~~~~~-~~~~~i~~i~~~~~~~g~~~a~N~g~~~a~ 174 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKE--NIEEIVREF-ESLLNIKYVRQKDYGYQLCAVRNLGLRAAK 174 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSS--CHHHHHHTT-TTTSCEEEEEECCCSCCHHHHHHHHHHHCC
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCch--hHHHHHHHh-hhcCCeEEEEeCCCCcchhHHHHHHHHhCC
Confidence 3565565 58999999997653 3466666542211 122222221 11234566554432 457788777887777
Q ss_pred CCcEEEEcCCcccCC-ChhHHHHHHHhcCce
Q 012817 103 AKDVLVVSGDLVSDV-PPGAVTAAHRRHDAV 132 (456)
Q Consensus 103 ~~~~lv~~~D~i~~~-~l~~~l~~~~~~~a~ 132 (456)
.+.++++.+|.+... .+..+++.+.+....
T Consensus 175 g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 175 YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 678999999965554 478888877765444
No 179
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=41.53 E-value=1.2e+02 Score=32.24 Aligned_cols=96 Identities=20% Similarity=0.215 Sum_probs=60.6
Q ss_pred ccccCCcc--hHHHHHHHHHHCCC----CEEEEEecCchh-h----------------HHHHhhhhhhccCccceEEEEc
Q 012817 28 LLPVANRP--VLSYVLEQLELSNI----KDLIVVVEGADA-A----------------LRVGGWISAAYVDRLHVEVATV 84 (456)
Q Consensus 28 llpi~gkp--li~~~l~~l~~~gi----~~v~iv~~~~~~-~----------------~~i~~~~~~~~~~~~~i~~~~~ 84 (456)
++|.-|.+ ++..+|+.+.+... -+++|+.+...+ . +.++++.. ..++.+...
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~-----~~~v~~i~~ 219 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR-----ELGVVYSTR 219 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH-----HHTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH-----hcCcEEEEe
Confidence 46766664 66999999976543 257777653211 1 01222221 124556554
Q ss_pred cCC-cChHHHHHHHHhcCCCCcEEEEcCCcccCC-ChhHHHHHHHh
Q 012817 85 PED-VGTAGALRAIAHHLTAKDVLVVSGDLVSDV-PPGAVTAAHRR 128 (456)
Q Consensus 85 ~~~-~gt~~al~~~~~~l~~~~~lv~~~D~i~~~-~l~~~l~~~~~ 128 (456)
++. .|.++++..+++....+.++++.+|.+... .++.+++.+.+
T Consensus 220 ~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~ 265 (802)
T 4hg6_A 220 ERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVE 265 (802)
T ss_dssp SSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhc
Confidence 444 577788888888887778999999965554 48888887754
No 180
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=40.75 E-value=36 Score=32.65 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=61.3
Q ss_pred ccccCCc-chHHHHHHHHHH----CC-CCEEEEEecCc-hhh-HHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHh
Q 012817 28 LLPVANR-PVLSYVLEQLEL----SN-IKDLIVVVEGA-DAA-LRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (456)
Q Consensus 28 llpi~gk-pli~~~l~~l~~----~g-i~~v~iv~~~~-~~~-~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~ 99 (456)
.+|.-|. ..|..+|+.+.. .. ..+|+|+-+.. +.. +.++++.... .. ..+.+...+...|.+.++..+++
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v-~~-~~~~~i~~~~n~G~g~A~n~G~~ 176 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEV-YS-ENELMSGYGDAHGKGDAMWRALS 176 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEE-EE-GGGTTGGGCSCCSHHHHHHHHTT
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchh-cc-cceeEecCCccCCHHHHHHHHHH
Confidence 3555453 567777777643 32 45777775422 111 2223221100 00 00001112345789999988888
Q ss_pred cCCCCcEEEEcCCcc--cCCChhHHHHHHHhc-CceEEEEEe
Q 012817 100 HLTAKDVLVVSGDLV--SDVPPGAVTAAHRRH-DAVVTAMIC 138 (456)
Q Consensus 100 ~l~~~~~lv~~~D~i--~~~~l~~~l~~~~~~-~a~~t~~~~ 138 (456)
....+.++++.+|.. .+..+..+++...+. ++++.....
T Consensus 177 ~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 177 VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 776677888899965 445688888887664 566655543
No 181
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=33.76 E-value=2e+02 Score=26.33 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=59.7
Q ss_pred cccCC-cchHHHHHHHHHHC--C-CCEEEEEecCc-hhh-HHHHhhhhhhccCccceEEEE-ccCCcChHHHHHHHHhcC
Q 012817 29 LPVAN-RPVLSYVLEQLELS--N-IKDLIVVVEGA-DAA-LRVGGWISAAYVDRLHVEVAT-VPEDVGTAGALRAIAHHL 101 (456)
Q Consensus 29 lpi~g-kpli~~~l~~l~~~--g-i~~v~iv~~~~-~~~-~~i~~~~~~~~~~~~~i~~~~-~~~~~gt~~al~~~~~~l 101 (456)
+|.-| ...|..+|+.+.+. . ..+++|+-+.. +.. +.++++.... .. .+.++. .+...|.+.++..+++..
T Consensus 54 Ip~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~-~~--~~~~~~~~~~n~G~~~a~n~g~~~a 130 (329)
T 3ckj_A 54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARV-VS--REQALPEVPIRPGKGEALWRSLAAS 130 (329)
T ss_dssp EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEE-EE--HHHHCTTSCCCCSHHHHHHHHHHHC
T ss_pred EeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhh-cc--ceeeeccCCCCCCHHHHHHHHHHhC
Confidence 45544 46888999998764 2 25777775422 211 2223221100 00 011110 244578889988888877
Q ss_pred CCCcEEEEcCCcc-c-CCChhHHHHHHHh-cCceEEE
Q 012817 102 TAKDVLVVSGDLV-S-DVPPGAVTAAHRR-HDAVVTA 135 (456)
Q Consensus 102 ~~~~~lv~~~D~i-~-~~~l~~~l~~~~~-~~a~~t~ 135 (456)
..+.++++.+|.+ . +..+..+++...+ .+.++..
T Consensus 131 ~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~ 167 (329)
T 3ckj_A 131 RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVK 167 (329)
T ss_dssp CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEE
T ss_pred CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEE
Confidence 7678899999965 4 4558888887544 3445433
No 182
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=23.41 E-value=2.4e+02 Score=26.27 Aligned_cols=93 Identities=18% Similarity=0.091 Sum_probs=49.5
Q ss_pred ccccCCcchHHHHHHHHHHCC--C--CEEEEEecCchhhHHHHhhhhhhccCccceEEEEcc---------CCcCh----
Q 012817 28 LLPVANRPVLSYVLEQLELSN--I--KDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVP---------EDVGT---- 90 (456)
Q Consensus 28 llpi~gkpli~~~l~~l~~~g--i--~~v~iv~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~---------~~~gt---- 90 (456)
+++..+||=+..+|+.|.++. . ..++|.-... .+.+++.+... . .++....++ ...|.
T Consensus 7 iI~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs--~~~~~~vi~~~-~--~~I~~~~~~d~~~~~~~~~N~g~~~y~ 81 (343)
T 1fo8_A 7 LVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCG--HEETAQVIASY-G--SAVTHIRQPDLSNIAVQPDHRKFQGYY 81 (343)
T ss_dssp EEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTT--CHHHHHHHHTT-G--GGSEEEECSCCCCCCCCTTCGGGHHHH
T ss_pred EEEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCC--CHHHHHHHHHc-C--CceEEEEcCCccccccchhhcCcccch
Confidence 456678887899999997753 2 2444443322 23444434332 1 123333221 12332
Q ss_pred --HHHHHHHH----hcCCCCcEEEEcCCcccCCChhHHHHH
Q 012817 91 --AGALRAIA----HHLTAKDVLVVSGDLVSDVPPGAVTAA 125 (456)
Q Consensus 91 --~~al~~~~----~~l~~~~~lv~~~D~i~~~~l~~~l~~ 125 (456)
+..+..++ +....+.++++-.|++...++-+.+++
T Consensus 82 ~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~ 122 (343)
T 1fo8_A 82 KIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHH
Confidence 23333343 333457799999999888885554444
No 183
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=21.76 E-value=4.1e+02 Score=25.25 Aligned_cols=49 Identities=6% Similarity=-0.044 Sum_probs=36.8
Q ss_pred CcChHHHHHHHH----hcCCCCcEEEEcCCcc--cCCChhHHHHHHHhcCceEEEE
Q 012817 87 DVGTAGALRAIA----HHLTAKDVLVVSGDLV--SDVPPGAVTAAHRRHDAVVTAM 136 (456)
Q Consensus 87 ~~gt~~al~~~~----~~l~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~a~~t~~ 136 (456)
..|-+.|++.++ .....+.++++.+|.- .+..+.++++...+ ++++++.
T Consensus 73 n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g 127 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRH 127 (397)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEE
Confidence 579999999988 6665567888999973 45668888887654 5776654
No 184
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=21.36 E-value=1.5e+02 Score=26.39 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=21.3
Q ss_pred CcchHHHHHHHHHHCCCCEEEEEec
Q 012817 33 NRPVLSYVLEQLELSNIKDLIVVVE 57 (456)
Q Consensus 33 gkpli~~~l~~l~~~gi~~v~iv~~ 57 (456)
+.|-+.-+|+.|...|+++++|+.-
T Consensus 63 ~~P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AAPSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEec
Confidence 6788999999999999999888864
No 185
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=20.79 E-value=1.9e+02 Score=29.73 Aligned_cols=99 Identities=18% Similarity=0.207 Sum_probs=55.9
Q ss_pred cccCC-cchHHHHHHHHHHC-----CCCEEEEEecCchh---hHHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHh
Q 012817 29 LPVAN-RPVLSYVLEQLELS-----NIKDLIVVVEGADA---ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (456)
Q Consensus 29 lpi~g-kpli~~~l~~l~~~-----gi~~v~iv~~~~~~---~~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~ 99 (456)
+|.-| ...|..+|+.+.+. ...+|+|+=+...+ ...+.+...... ..+.++..+ ..|.+.+.-.+++
T Consensus 186 IptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---~~I~vI~~~-N~G~a~a~N~Gl~ 261 (657)
T 4fix_A 186 IPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---SRLSIHDQP-NLGGSGGYSRVMY 261 (657)
T ss_dssp CCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---GGEEEEECC-CCHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---CCEEEEECC-CCCHHHHHHHHHH
Confidence 44434 46899999998653 23366666542211 112233232221 146666555 6666655444433
Q ss_pred cC----CCCcEEEEcCCcccCC-ChhHHHHHHHhcCc
Q 012817 100 HL----TAKDVLVVSGDLVSDV-PPGAVTAAHRRHDA 131 (456)
Q Consensus 100 ~l----~~~~~lv~~~D~i~~~-~l~~~l~~~~~~~a 131 (456)
.. ..+.++++..|.+... .|..+++.+.....
T Consensus 262 ~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~ 298 (657)
T 4fix_A 262 EALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKA 298 (657)
T ss_dssp HHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSS
T ss_pred HHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCC
Confidence 32 3467899999965544 58888888776533
No 186
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=20.45 E-value=21 Score=37.42 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHCCCC--EEEEEecCc-hhh-HHHHhhhhhhccCccceEEEEccCCcChHHHHHHHHhcCCCCcEEEEc
Q 012817 35 PVLSYVLEQLELSNIK--DLIVVVEGA-DAA-LRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVS 110 (456)
Q Consensus 35 pli~~~l~~l~~~gi~--~v~iv~~~~-~~~-~~i~~~~~~~~~~~~~i~~~~~~~~~gt~~al~~~~~~l~~~~~lv~~ 110 (456)
..|..+|+.+.+.... +++|+-+.. +.. +.++++.... ...+.++..++..|.+.+.-.+++....+.++++.
T Consensus 15 ~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~---~~~i~~i~~~~n~G~~~arN~gi~~A~gdyI~flD 91 (729)
T 3l7i_A 15 EYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDY---DKNIRFIDLDENSGHAHARNIALEEVETPYFMFLD 91 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhC---CCCEEEEECCCCCCHHHHHHHHHHhccCCEEEEEC
Confidence 4566677776544322 455543321 111 2233322211 11355555455677777777777776667788899
Q ss_pred CCc-ccCCChhHHHHHHH
Q 012817 111 GDL-VSDVPPGAVTAAHR 127 (456)
Q Consensus 111 ~D~-i~~~~l~~~l~~~~ 127 (456)
+|. +.+.-++.+++...
T Consensus 92 ~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 92 ADDELASYAITFYLEKFN 109 (729)
T ss_dssp ------------------
T ss_pred CCCCCChhHHHHHHHHhc
Confidence 984 44455788887766
Done!