Your job contains 1 sequence.
>012818
MGDTEMVDQDSLHISEANLVEASAQQQQASQQPSENGQSSCRETAEDKPETLPSVDEVFP
EKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVENEPKTNTSVTPIPHGESSTS
KAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLNC
LKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLS
GELQLPASSFPQPTNAGKEASGYQTPGSSRARRDAAARAMQGWHAQRLLGHGEVAEPIIK
DKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQIITEIVDVGPPADWVKINVRE
AKDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVILPSRIDPL
QTSAVVSLHGRLYGLKLGERQIYEGRDWNYVALLIQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012818
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037345 - symbol:AT1G20910 species:3702 "Arabi... 1042 2.8e-105 1
TAIR|locus:2827523 - symbol:AT2G17410 species:3702 "Arabi... 953 3.3e-98 2
UNIPROTKB|F1PXY8 - symbol:ARID5A "Uncharacterized protein... 152 1.6e-07 1
UNIPROTKB|Q3SWY1 - symbol:ARID5A "AT-rich interactive dom... 142 1.9e-06 1
UNIPROTKB|G3MY61 - symbol:ARID5A "AT-rich interactive dom... 142 2.1e-06 1
UNIPROTKB|F1SU48 - symbol:ARID5A "Uncharacterized protein... 141 2.5e-06 1
MGI|MGI:2443039 - symbol:Arid5a "AT rich interactive doma... 140 3.2e-06 1
UNIPROTKB|F1NIM8 - symbol:F1NIM8 "Uncharacterized protein... 143 3.4e-06 1
UNIPROTKB|F1NK39 - symbol:F1NK39 "Uncharacterized protein... 143 3.7e-06 1
ASPGD|ASPL0000041042 - symbol:AN2905 species:162425 "Emer... 142 3.8e-06 1
UNIPROTKB|F1LRI4 - symbol:Arid5a "Protein Arid5a" species... 137 7.2e-06 1
UNIPROTKB|Q03989 - symbol:ARID5A "AT-rich interactive dom... 135 1.1e-05 1
TAIR|locus:2199824 - symbol:AT1G76110 species:3702 "Arabi... 131 1.2e-05 1
UNIPROTKB|I3L5S4 - symbol:ARID3C "Uncharacterized protein... 130 2.0e-05 1
ZFIN|ZDB-GENE-081028-53 - symbol:ch1073-321c8.1 "ch1073-3... 136 2.3e-05 1
UNIPROTKB|F1SEC1 - symbol:ARID3C "Uncharacterized protein... 130 2.3e-05 1
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 137 2.6e-05 1
UNIPROTKB|J9JHT7 - symbol:ARID4B "Uncharacterized protein... 135 2.9e-05 1
UNIPROTKB|F1RGW9 - symbol:ARID4B "Uncharacterized protein... 135 3.1e-05 1
UNIPROTKB|F1PYK7 - symbol:ARID4B "Uncharacterized protein... 135 3.1e-05 1
UNIPROTKB|Q4LE39 - symbol:ARID4B "AT-rich interactive dom... 135 3.1e-05 1
UNIPROTKB|E2RGA0 - symbol:ARID3C "Uncharacterized protein... 129 3.3e-05 2
FB|FBgn0004795 - symbol:retn "retained" species:7227 "Dro... 131 5.5e-05 1
UNIPROTKB|F1LMH4 - symbol:Arid4b "AT-rich interactive dom... 136 9.7e-05 3
RGD|619919 - symbol:Arid4b "AT rich interactive domain 4B... 136 9.8e-05 3
UNIPROTKB|F1MNB5 - symbol:ARID4B "Uncharacterized protein... 130 0.00011 1
UNIPROTKB|E1BGK1 - symbol:ARID4A "Uncharacterized protein... 129 0.00013 1
MGI|MGI:2137512 - symbol:Arid4b "AT rich interactive doma... 136 0.00019 2
UNIPROTKB|F1NPA3 - symbol:ARID4A "Uncharacterized protein... 126 0.00028 1
UNIPROTKB|F1NG14 - symbol:ARID4A "Uncharacterized protein... 126 0.00028 1
UNIPROTKB|F1PVK5 - symbol:ARID4A "Uncharacterized protein... 126 0.00028 1
UNIPROTKB|F1SSK5 - symbol:ARID4A "Uncharacterized protein... 126 0.00028 1
UNIPROTKB|F1NG15 - symbol:ARID4A "Uncharacterized protein... 126 0.00029 1
UNIPROTKB|F1NAR1 - symbol:ARID5B "AT-rich interactive dom... 125 0.00031 1
UNIPROTKB|Q5ZJ69 - symbol:ARID5B "AT-rich interactive dom... 125 0.00034 1
ZFIN|ZDB-GENE-050809-105 - symbol:arid4a "AT rich interac... 125 0.00038 3
UNIPROTKB|F1S6T2 - symbol:ARID3A "Uncharacterized protein... 120 0.00050 1
UNIPROTKB|E1C9H0 - symbol:ARID2 "Uncharacterized protein"... 125 0.00055 1
UNIPROTKB|Q68CP9 - symbol:ARID2 "AT-rich interactive doma... 125 0.00055 1
UNIPROTKB|P29374 - symbol:ARID4A "AT-rich interactive dom... 123 0.00060 1
UNIPROTKB|F1NAK8 - symbol:LOC100858693 "Uncharacterized p... 116 0.00066 1
UNIPROTKB|C9J1Q0 - symbol:ARID5A "AT rich interactive dom... 118 0.00070 1
UNIPROTKB|G3MWU0 - symbol:ARID3C "Uncharacterized protein... 115 0.00092 1
>TAIR|locus:2037345 [details] [associations]
symbol:AT1G20910 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002068 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
Gene3D:1.10.150.60 SUPFAM:SSF46774 ProtClustDB:CLSN2680092
EMBL:AC007369 EMBL:AB493470 IPI:IPI00543271 PIR:G86341
RefSeq:NP_173515.2 UniGene:At.43690 ProteinModelPortal:C0SUW7
SMR:C0SUW7 PaxDb:C0SUW7 PRIDE:C0SUW7 EnsemblPlants:AT1G20910.1
GeneID:838684 KEGG:ath:AT1G20910 TAIR:At1g20910 eggNOG:NOG284320
HOGENOM:HOG000239411 OMA:ANNGHGM PhylomeDB:C0SUW7
Genevestigator:C0SUW7 Uniprot:C0SUW7
Length = 398
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 198/314 (63%), Positives = 241/314 (76%)
Query: 121 KAEDESVRKSKNWLNDIEMGEADE-GTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLN 179
K E E+ +K K WL D E DE GTP EQ F++E+E+FY+E+ LEFKPPKFYG+PLN
Sbjct: 79 KTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQPLN 138
Query: 180 CLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRL 239
LKLWRAVV LGGYEVVT +KLWRQVGESF+PPKTCTTVS+TFR FYEKALLEYEK R
Sbjct: 139 ILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYEKALLEYEKCLRN 198
Query: 240 SGELQLPASSFPQPTNAGKEASGYQTPGSSXXXXXXXXXXMQGWHAQRLLGHGEVAEPII 299
+GEL LP S+ ++ KE S +Q GS MQGWHAQRL+G GEV P +
Sbjct: 199 NGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQRLVGSGEVTAPAV 258
Query: 300 KDKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQIITEIVDVGPPADWVKINVR 359
KDK L S + +K LK+IGL K++ S + EADKQ+ E+VDVGP ADWVKINV+
Sbjct: 259 KDKGLISTPKHKK-LKSIGLQKHKQQTSMDHVVTNEADKQLAAEVVDVGPVADWVKINVK 317
Query: 360 EAKDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVILPSRIDP 419
E+KD +E++ALVPGLLR+EVR+QSDPAG++VITG+PEQ+DNPWGITPFKK+V L +RIDP
Sbjct: 318 ESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDLSARIDP 377
Query: 420 LQTSAVVSLHGRLY 433
L TSAV+S+HGRL+
Sbjct: 378 LHTSAVMSMHGRLF 391
>TAIR|locus:2827523 [details] [associations]
symbol:AT2G17410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Pfam:PF00011 InterPro:IPR002068 GO:GO:0005634 EMBL:CP002685
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 InterPro:IPR008978
SUPFAM:SSF49764 PROSITE:PS01031 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:AY052359 EMBL:BT002633 EMBL:AK176382 EMBL:AK230281
IPI:IPI00548500 PIR:G84551 RefSeq:NP_179333.2 UniGene:At.12107
ProteinModelPortal:Q940Y3 SMR:Q940Y3 PRIDE:Q940Y3
EnsemblPlants:AT2G17410.1 GeneID:816247 KEGG:ath:AT2G17410
TAIR:At2g17410 eggNOG:NOG313221 HOGENOM:HOG000151156
InParanoid:Q940Y3 OMA:NDANNES PhylomeDB:Q940Y3
ProtClustDB:CLSN2680092 Genevestigator:Q940Y3 Uniprot:Q940Y3
Length = 786
Score = 953 (340.5 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 190/339 (56%), Positives = 238/339 (70%)
Query: 97 THVENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKE 156
+++++E + + + H T D ++R +++L D + GT E+Q+ FMKE
Sbjct: 444 SNIKSEARGSGDLNNGVHKIVRTPPVFDGTMRAKRSFLLDDASDGNESGTEEDQSAFMKE 503
Query: 157 IESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCT 216
++SF+RE ++FKPPKFYGE LNCLKLWRAV RLGGY+ VT SKLWRQVGESF PPKTCT
Sbjct: 504 LDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCT 563
Query: 217 TVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASGYQTPGSSXXXXXXX 276
TVSWTFR FYEKALLEYE+HK GELQ+P +P N +ASG S
Sbjct: 564 TVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASG-----SGRARRDAA 618
Query: 277 XXXMQGWHAQRLLGHGEVAEPIIKDKSLPSPARREKQLKNI-GLPKN-RTLDSAEKAALT 334
MQGWH+QRL G+GEV++P IKDK+L +REKQ+ GL K R + K A+
Sbjct: 619 SRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAAEHGAKNAIH 678
Query: 335 EADKQIITEIVDVGPPADWVKINVREAKDCYEVYALVPGLLREEVRVQSDPAGRLVITGE 394
+ + +VDVGPPADWVKINV+ +DC+EVYALVPGL+REEVRVQSDPAGRLVI+GE
Sbjct: 679 VSKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLVISGE 738
Query: 395 PEQVDNPWGITPFKKVVILPSRIDPLQTSAVVSLHGRLY 433
PE NPWG TPFKKVV LP+RIDP TSAVV+L+G+L+
Sbjct: 739 PENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTLNGQLF 777
Score = 42 (19.8 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 16/75 (21%), Positives = 29/75 (38%)
Query: 52 LPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVE---NEPKTNTS 108
+ S E E G + + G G D++ E+ ++ +G+ E E + +
Sbjct: 7 IESTMESLTEMESERVEQGTDKEIGSGEKRQDDVKETENENSGERVGEEAPVREHEDSPC 66
Query: 109 VTPIPHGESSTSKAE 123
+ I G S S E
Sbjct: 67 LIVIEEGTSLASLEE 81
>UNIPROTKB|F1PXY8 [details] [associations]
symbol:ARID5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 CTD:10865 OMA:GLMHFPP
EMBL:AAEX03010895 EMBL:AAEX03010894 RefSeq:XP_540165.2
ProteinModelPortal:F1PXY8 Ensembl:ENSCAFT00000010557 GeneID:483050
KEGG:cfa:483050 Uniprot:F1PXY8
Length = 602
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 47/164 (28%), Positives = 77/164 (46%)
Query: 100 ENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIES 159
E +P + SV+P P GE S S++ + S + E D+ EEQA F+ +
Sbjct: 14 EGDP-LDPSVSPQPDGEQSRSQSPIH-LEDSPEAGGE---REEDQEREEEQA-FLVSLYK 67
Query: 160 FYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTV 218
F +E + G + +N K+++AV +LG YE+VT +LW+ V + T+
Sbjct: 68 FMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYEMVTGRRLWKNVYDELGGSPGSTSA 127
Query: 219 SWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASG 262
+ R YE+ +L Y +H + + LP S + KE G
Sbjct: 128 ATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKEPRG 171
>UNIPROTKB|Q3SWY1 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 EMBL:BC104604 IPI:IPI00705467
RefSeq:NP_001030426.1 UniGene:Bt.45843 ProteinModelPortal:Q3SWY1
SMR:Q3SWY1 PRIDE:Q3SWY1 Ensembl:ENSBTAT00000026200 GeneID:524118
KEGG:bta:524118 CTD:10865 eggNOG:NOG265834 HOGENOM:HOG000034050
HOVERGEN:HBG062210 InParanoid:Q3SWY1 OrthoDB:EOG4BCDMM
NextBio:20873893 Uniprot:Q3SWY1
Length = 592
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/164 (27%), Positives = 72/164 (43%)
Query: 100 ENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIES 159
E EP + V+P P GE + VR + E G E EE+ F+ +
Sbjct: 14 EGEP-LDPPVSPQPDGEPRSRSP----VRLEE----PPEAGREREEEQEEEQAFLVSLYK 64
Query: 160 FYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTV 218
F +E + G + +N K+++AV +LG YE+VT +LW+ V + T+
Sbjct: 65 FMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSA 124
Query: 219 SWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASG 262
+ R YE+ +L Y +H + + LP S + KE G
Sbjct: 125 ATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKEPRG 168
>UNIPROTKB|G3MY61 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9913 "Bos taurus" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035066 "positive regulation of histone
acetylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005730 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
OMA:GLMHFPP EMBL:DAAA02030120 Ensembl:ENSBTAT00000064181
Uniprot:G3MY61
Length = 637
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/164 (27%), Positives = 72/164 (43%)
Query: 100 ENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIES 159
E EP + V+P P GE + VR + E G E EE+ F+ +
Sbjct: 14 EGEP-LDPPVSPQPDGEPRSRSP----VRLEE----PPEAGREREEEQEEEQAFLVSLYK 64
Query: 160 FYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTV 218
F +E + G + +N K+++AV +LG YE+VT +LW+ V + T+
Sbjct: 65 FMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSA 124
Query: 219 SWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASG 262
+ R YE+ +L Y +H + + LP S + KE G
Sbjct: 125 ATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKEPRG 168
>UNIPROTKB|F1SU48 [details] [associations]
symbol:ARID5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035066 "positive
regulation of histone acetylation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002062 "chondrocyte differentiation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005730 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 OMA:GLMHFPP EMBL:FP102745
Ensembl:ENSSSCT00000008899 Uniprot:F1SU48
Length = 597
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 141 EADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTAS 199
E ++ EEQA F+ + F +E + G + +N K+++AV +LG YE+VT
Sbjct: 50 EEEQEREEEQA-FLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGR 108
Query: 200 KLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKE 259
+LW+ V + T+ + R YE+ +L Y +H + + LP S + KE
Sbjct: 109 RLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKE 168
Query: 260 ASG 262
A G
Sbjct: 169 AQG 171
>MGI|MGI:2443039 [details] [associations]
symbol:Arid5a "AT rich interactive domain 5A (MRF1-like)"
species:10090 "Mus musculus" [GO:0002062 "chondrocyte
differentiation" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0035066 "positive regulation of histone
acetylation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
MGI:MGI:2443039 GO:GO:0005730 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0035066
GO:GO:0002062 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00510000046413 CTD:10865 eggNOG:NOG265834
HOVERGEN:HBG062210 OrthoDB:EOG4BCDMM OMA:GLMHFPP EMBL:AK041344
EMBL:AK085015 EMBL:AK149839 EMBL:AK150170 EMBL:AK156376
EMBL:AK156622 EMBL:AK156934 EMBL:AK157607 EMBL:BC027152
IPI:IPI00221978 IPI:IPI00652494 IPI:IPI00653928 IPI:IPI00831073
IPI:IPI00831466 RefSeq:NP_001165676.1 RefSeq:NP_001165677.1
RefSeq:NP_666108.2 UniGene:Mm.34316 ProteinModelPortal:Q3U108
SMR:Q3U108 PhosphoSite:Q3U108 PRIDE:Q3U108
Ensembl:ENSMUST00000115029 Ensembl:ENSMUST00000115031
Ensembl:ENSMUST00000115032 Ensembl:ENSMUST00000137906 GeneID:214855
KEGG:mmu:214855 UCSC:uc007apu.2 UCSC:uc007apv.2 UCSC:uc007apx.2
UCSC:uc007apy.2 NextBio:374489 Bgee:Q3U108 CleanEx:MM_ARID5A
Genevestigator:Q3U108 Uniprot:Q3U108
Length = 590
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/144 (28%), Positives = 67/144 (46%)
Query: 121 KAEDESVR-KSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPL 178
K +DE R +S L D EA G EE+ F+ + F +E + G + +
Sbjct: 26 KPDDEQSRSQSPTQLQDSP--EAG-GEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQI 82
Query: 179 NCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
N K+++AV +LG YE+VT +LW+ V + T+ + R YE+ +L Y +H +
Sbjct: 83 NLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLK 142
Query: 239 LSGELQLPASSFPQPTNAGKEASG 262
+ LP + + KE G
Sbjct: 143 GEDDKPLPPTKPRKQYKMAKELRG 166
>UNIPROTKB|F1NIM8 [details] [associations]
symbol:F1NIM8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR012603 Pfam:PF08169
GeneTree:ENSGT00510000046413 EMBL:AADN02051930 EMBL:AADN02051931
EMBL:AADN02051932 EMBL:AADN02051933 EMBL:AADN02051934
EMBL:AADN02051935 IPI:IPI00814389 Ensembl:ENSGALT00000023152
ArrayExpress:F1NIM8 Uniprot:F1NIM8
Length = 1101
Score = 143 (55.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 116 ESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFY 174
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 180 DSSSSEAEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLG 239
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L +E
Sbjct: 240 YRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFE 299
Query: 235 KH---KRLSGELQLPASSFPQP 253
++ + ++ LP +P
Sbjct: 300 EYCTSANIEFQMALPEKVTSKP 321
>UNIPROTKB|F1NK39 [details] [associations]
symbol:F1NK39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160 OMA:FRLVHKL
GeneTree:ENSGT00510000046413 EMBL:AADN02051930 EMBL:AADN02051931
EMBL:AADN02051932 EMBL:AADN02051933 EMBL:AADN02051934
EMBL:AADN02051935 IPI:IPI00595162 Ensembl:ENSGALT00000000385
ArrayExpress:F1NK39 Uniprot:F1NK39
Length = 1184
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 116 ESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFY 174
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 180 DSSSSEAEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLG 239
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L +E
Sbjct: 240 YRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFE 299
Query: 235 KH---KRLSGELQLPASSFPQP 253
++ + ++ LP +P
Sbjct: 300 EYCTSANIEFQMALPEKVTSKP 321
>ASPGD|ASPL0000041042 [details] [associations]
symbol:AN2905 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0044732 "mitotic
spindle pole body" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071585 "detoxification
of cadmium ion" evidence=IEA] [GO:0010972 "negative regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0071276
"cellular response to cadmium ion" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
EMBL:BN001306 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
EnsemblFungi:CADANIAT00010184 OMA:TRNMLLR Uniprot:C8VJ78
Length = 980
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 147 PEEQAEFMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQV 205
P FM+ ++ F L F P P G P+N ++L+ AV++LGG + VTA+ +W+ +
Sbjct: 282 PPNPEGFMRSLQKFMMSRNLPFDPNPIVSGRPINLVQLYAAVMKLGGSKKVTAANMWQVI 341
Query: 206 GESFH-PPKTCTTVSWTFRIFYEKALLEYEK------HKRLSGELQLPASSFP-QPTN-A 256
+ PP R Y++ L YE+ K+ + ++Q P S P QP++ +
Sbjct: 342 AQQLQFPPVQFPMAVQEIRDLYQRTLAAYEQAFLSSQQKQFADQVQQP--SIPRQPSDPS 399
Query: 257 GKEASG---YQTPG 267
G + QTPG
Sbjct: 400 GMQLQSPAVKQTPG 413
>UNIPROTKB|F1LRI4 [details] [associations]
symbol:Arid5a "Protein Arid5a" species:10116 "Rattus
norvegicus" [GO:0002062 "chondrocyte differentiation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0035066 "positive
regulation of histone acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 RGD:1311041 GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774 IPI:IPI00777468
Ensembl:ENSRNOT00000059916 ArrayExpress:F1LRI4 Uniprot:F1LRI4
Length = 615
Score = 137 (53.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 121 KAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLN 179
K +DE KS++ + +E G EE+ F+ + F +E + G + +N
Sbjct: 51 KPQDEQ-SKSQSPIQ-LEDSPKAGGEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQIN 108
Query: 180 CLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRL 239
K+++AV +LG YE+VT +LW+ V + T+ + R YE+ +L Y +H +
Sbjct: 109 LWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKG 168
Query: 240 SGELQLPASSFPQPTNAGKEASG 262
+ LP + + KE G
Sbjct: 169 EDDKPLPPTKPRKQYKMAKELRG 191
>UNIPROTKB|Q03989 [details] [associations]
symbol:ARID5A "AT-rich interactive domain-containing
protein 5A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002062 "chondrocyte differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0035066 "positive regulation of histone acetylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0045892 GO:GO:0005730 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q14865 CTD:10865
eggNOG:NOG265834 HOGENOM:HOG000034050 HOVERGEN:HBG062210
OrthoDB:EOG4BCDMM EMBL:M62324 IPI:IPI00012918 PIR:S27962
RefSeq:NP_997646.1 UniGene:Hs.920 ProteinModelPortal:Q03989
SMR:Q03989 IntAct:Q03989 MINT:MINT-2868767 STRING:Q03989
PhosphoSite:Q03989 DMDM:148840818 PRIDE:Q03989 DNASU:10865
Ensembl:ENST00000357485 GeneID:10865 KEGG:hsa:10865 UCSC:uc002swe.3
GeneCards:GC02P097203 HGNC:HGNC:17361 HPA:HPA023879 MIM:611583
neXtProt:NX_Q03989 PharmGKB:PA134937822 InParanoid:Q03989
OMA:GLMHFPP ChiTaRS:ARID5A GenomeRNAi:10865 NextBio:41253
ArrayExpress:Q03989 Bgee:Q03989 CleanEx:HS_ARID5A
Genevestigator:Q03989 Uniprot:Q03989
Length = 594
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 141 EADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTAS 199
E ++ EEQA F+ + F +E + G + +N K+++AV +LG YE+VT
Sbjct: 50 EEEQEREEEQA-FLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGR 108
Query: 200 KLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKE 259
+LW+ V + T+ + R YE+ +L Y +H + + LP S + KE
Sbjct: 109 RLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPTSKPRKQYKMAKE 168
Query: 260 ASG 262
G
Sbjct: 169 NRG 171
>TAIR|locus:2199824 [details] [associations]
symbol:AT1G76110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006333 "chromatin
assembly or disassembly" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR009071 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Pfam:PF00505
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC009978 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG327790 HOGENOM:HOG000243289
ProtClustDB:CLSN2681954 HSSP:P11632 EMBL:AY099630 EMBL:BT008823
IPI:IPI00540147 PIR:B96789 RefSeq:NP_177738.1 UniGene:At.43665
ProteinModelPortal:Q9SGS2 SMR:Q9SGS2 IntAct:Q9SGS2 PaxDb:Q9SGS2
PRIDE:Q9SGS2 EnsemblPlants:AT1G76110.1 GeneID:843943
KEGG:ath:AT1G76110 TAIR:At1g76110 InParanoid:Q9SGS2 OMA:FMIPVIG
PhylomeDB:Q9SGS2 Genevestigator:Q9SGS2 Uniprot:Q9SGS2
Length = 338
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/157 (29%), Positives = 71/157 (45%)
Query: 116 ESSTSKAEDESVRKSKNWLNDI-EMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFY 174
ES+ S+A E + S + + E E ++ + F + F+ + +F P
Sbjct: 6 ESTPSQATVEMMATSPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIG 65
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
G+ L+ L+ V R GGYE V K WR+VG F T T+ S+ R Y L YE
Sbjct: 66 GKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYE 125
Query: 235 K-HKRLS-GELQLPASSFPQPTNAGKEASGYQ-TPGS 268
+ H + G L P ++F + KE + + TP S
Sbjct: 126 QVHLFTARGPLLHPIATFHANPSTSKEMALVEYTPPS 162
>UNIPROTKB|I3L5S4 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:CU928717 Ensembl:ENSSSCT00000025460 Uniprot:I3L5S4
Length = 386
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 48/196 (24%), Positives = 81/196 (41%)
Query: 60 PEKSDAEATAGVNTKSGG-GGAGTDELPESTSKTNGDDTHVENEPKTNTSVTPIPHGESS 118
P + T + GG G G +E ++ G++ E+E S P + +
Sbjct: 29 PPRPSFPGTRTLQAPEGGLGKVGAEEEEDAQEDEEGEEAGPEDEAAEGESH---PGTQDT 85
Query: 119 TSKAEDESVRKSKNWLNDIEMGEADE-GTPEEQAEFMKEIESFYRENALEF-KPPKFYGE 176
+S + W + + + E ++ EF+ ++ SF ++ + P +
Sbjct: 86 SSPSSQPPGPHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQ 145
Query: 177 PLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE-K 235
L+ L+R V GG V K+WR+V P T T+ ++T R Y K L YE +
Sbjct: 146 VLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECE 205
Query: 236 HKRLS--GELQLPASS 249
+ LS GELQ S
Sbjct: 206 TQALSSPGELQAAIDS 221
>ZFIN|ZDB-GENE-081028-53 [details] [associations]
symbol:ch1073-321c8.1 "ch1073-321c8.1" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00298 SMART:SM00501 InterPro:IPR002999
ZFIN:ZDB-GENE-081028-53 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 GeneTree:ENSGT00510000046413 EMBL:CU638703
EMBL:CU639406 EMBL:CU639467 EMBL:CU681839 IPI:IPI00629769
Ensembl:ENSDART00000128415 ArrayExpress:F1R2N8 Bgee:F1R2N8
Uniprot:F1R2N8
Length = 1249
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 106 NTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENA 165
NT T + SS+ E+E + + + E E E PEE+ F++++ F +
Sbjct: 265 NTWRTEVKDESSSSEDEEEEEEEEQEEEASSEEEEEEVEPFPEEKDNFLQQLYKFMEDRG 324
Query: 166 LEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRI 224
K P + LN KL+R V +LGG++ + + +W+QV + P + + +
Sbjct: 325 TPINKRPVLGYKNLNLFKLYRLVHKLGGFDNIESGSVWKQVYQDLGIPVLNSAAGYNVKC 384
Query: 225 FYEKALLEYEKHKRLSG 241
Y K L +E + +G
Sbjct: 385 AYRKYLYGFEDYCTSTG 401
>UNIPROTKB|F1SEC1 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
OMA:FARRQPV EMBL:CU928717 RefSeq:XP_003130719.1 UniGene:Ssc.88977
Ensembl:ENSSSCT00000012008 GeneID:100524334 KEGG:ssc:100524334
Uniprot:F1SEC1
Length = 416
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/196 (24%), Positives = 81/196 (41%)
Query: 60 PEKSDAEATAGVNTKSGG-GGAGTDELPESTSKTNGDDTHVENEPKTNTSVTPIPHGESS 118
P + T + GG G G +E ++ G++ E+E S P + +
Sbjct: 29 PPRPSFPGTRTLQAPEGGLGKVGAEEEEDAQEDEEGEEAGPEDEAAEGESH---PGTQDT 85
Query: 119 TSKAEDESVRKSKNWLNDIEMGEADE-GTPEEQAEFMKEIESFYRENALEF-KPPKFYGE 176
+S + W + + + E ++ EF+ ++ SF ++ + P +
Sbjct: 86 SSPSSQPPGPHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQ 145
Query: 177 PLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE-K 235
L+ L+R V GG V K+WR+V P T T+ ++T R Y K L YE +
Sbjct: 146 VLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECE 205
Query: 236 HKRLS--GELQLPASS 249
+ LS GELQ S
Sbjct: 206 TQALSSPGELQAAIDS 221
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 137 (53.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWR 203
EG+ ++ + F+ +N E + P +PL+ KL +AV GG++ V SK W
Sbjct: 157 EGSTRVNMNYVDALVKFHNQNGKEIRLPYVDKKPLDLYKLKKAVENRGGFDKVCKSKKWA 216
Query: 204 QVGESF-HPPKTCTTVSWTFRIFYEKALLEYEKHKRLS--G-----ELQLPASSFPQPTN 255
++G + K +++S + + Y+K L YE++ R + G EL+ P P
Sbjct: 217 EIGRDLGYSGKIMSSLSTSLKNSYQKFLCPYEEYLRAARPGVHQQLELEYGGPLTPSPAP 276
Query: 256 AGKEASGYQTPGSSXXXXXXXXXXMQGWHAQRLLGHGE---VAEPIIKDKSLPSPA 308
+ + S TP S+ Q A + +G+ + + KS PSPA
Sbjct: 277 SPMKKSNINTPASARAGSPTR----QASDALQATVNGKSTTTKDSVNSTKSAPSPA 328
>UNIPROTKB|J9JHT7 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 InterPro:IPR002999
GO:GO:0003677 GO:GO:0005622 SMART:SM00333 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR012603 Pfam:PF08169
GeneTree:ENSGT00510000046413 EMBL:AAEX03002684 EMBL:AAEX03002683
Ensembl:ENSCAFT00000043863 Uniprot:J9JHT7
Length = 1226
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 270 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 329
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 330 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 389
Query: 232 EYEKHKRLSG-ELQL 245
+E++ R + E Q+
Sbjct: 390 GFEEYCRSANIEFQM 404
>UNIPROTKB|F1RGW9 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:CU407042 Ensembl:ENSSSCT00000011120 Uniprot:F1RGW9
Length = 1307
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 270 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 329
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 330 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 389
Query: 232 EYEKHKRLSG-ELQL 245
+E++ R + E Q+
Sbjct: 390 GFEEYCRSANIEFQM 404
>UNIPROTKB|F1PYK7 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 CTD:51742 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:AAEX03002684 EMBL:AAEX03002683 RefSeq:XP_546077.2
RefSeq:XP_856659.1 ProteinModelPortal:F1PYK7
Ensembl:ENSCAFT00000018209 GeneID:488959 KEGG:cfa:488959
Uniprot:F1PYK7
Length = 1312
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 272 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 331
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 332 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 391
Query: 232 EYEKHKRLSG-ELQL 245
+E++ R + E Q+
Sbjct: 392 GFEEYCRSANIEFQM 406
>UNIPROTKB|Q4LE39 [details] [associations]
symbol:ARID4B "AT-rich interactive domain-containing
protein 4B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000953
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00298
SMART:SM00501 InterPro:IPR002999 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG248805
HOVERGEN:HBG058247 InterPro:IPR016197 InterPro:IPR012603
InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
EMBL:AF214114 EMBL:AY220790 EMBL:AF208045 EMBL:AB030181
EMBL:AB210032 EMBL:AL391994 EMBL:AL133418 EMBL:BC048959
EMBL:BC062536 EMBL:BC104632 EMBL:BC130418 EMBL:BX648820
EMBL:AL133594 EMBL:AF227899 EMBL:AF083249 EMBL:AK023144
IPI:IPI00302917 IPI:IPI00328828 IPI:IPI00647132 IPI:IPI00647647
PIR:T43497 RefSeq:NP_001193723.1 RefSeq:NP_057458.4
RefSeq:NP_112739.2 UniGene:Hs.575782 HSSP:Q14865
ProteinModelPortal:Q4LE39 SMR:Q4LE39 IntAct:Q4LE39 STRING:Q4LE39
PhosphoSite:Q4LE39 DMDM:143955276 PaxDb:Q4LE39 PRIDE:Q4LE39
DNASU:51742 Ensembl:ENST00000264183 Ensembl:ENST00000349213
Ensembl:ENST00000366603 Ensembl:ENST00000418304
Ensembl:ENST00000421364 GeneID:51742 KEGG:hsa:51742 UCSC:uc001hwq.3
UCSC:uc001hwr.3 UCSC:uc001hwt.4 CTD:51742 GeneCards:GC01M235295
HGNC:HGNC:15550 HPA:HPA027333 MIM:609696 neXtProt:NX_Q4LE39
PharmGKB:PA134940494 InParanoid:Q4LE39 OMA:FRLVHKL PhylomeDB:Q4LE39
ChiTaRS:ARID4B GenomeRNAi:51742 NextBio:55820 ArrayExpress:Q4LE39
Bgee:Q4LE39 Genevestigator:Q4LE39 Uniprot:Q4LE39
Length = 1312
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 272 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 331
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 332 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 391
Query: 232 EYEKHKRLSG-ELQL 245
+E++ R + E Q+
Sbjct: 392 GFEEYCRSANIEFQM 406
>UNIPROTKB|E2RGA0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:138715 OMA:FARRQPV EMBL:AAEX03007945 RefSeq:XP_854656.1
ProteinModelPortal:E2RGA0 Ensembl:ENSCAFT00000028460 GeneID:611843
KEGG:cfa:611843 NextBio:20897379 Uniprot:E2RGA0
Length = 411
Score = 129 (50.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 56/206 (27%), Positives = 82/206 (39%)
Query: 49 PETLPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVENEPKTNTS 108
P LP + P +A G G GT+E ++ G++ E E T S
Sbjct: 22 PHPLPPPLPLLPGPRTLQAPEGAL-----GEVGTEEEEDAEEDEEGEEAGAEEEA-TEES 75
Query: 109 VTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADE-GTPEEQAEFMKEIESFYRENALE 167
T G SS S W + + + E ++ EF+ ++ SF ++
Sbjct: 76 HTGT-RGPSSPSSQPPGP--HPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTP 132
Query: 168 F-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFY 226
+ P + L+ L+R V GG V K+WR+V P T T+ ++T R Y
Sbjct: 133 VNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQY 192
Query: 227 EKALLEYEKHKR-LS--GELQLPASS 249
K L YE R LS GELQ S
Sbjct: 193 MKYLYPYECETRALSSPGELQAAIDS 218
Score = 41 (19.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 241 GELQLPASSFPQPTNAGKEASG 262
G++ P ++ P PT + + A G
Sbjct: 246 GQISTPGAAAPAPTPSPRPAPG 267
>FB|FBgn0004795 [details] [associations]
symbol:retn "retained" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0003677 "DNA binding"
evidence=NAS;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS;IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007435 "salivary gland morphogenesis"
evidence=NAS] [GO:0042063 "gliogenesis" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007431 "salivary gland development" evidence=NAS] [GO:0045924
"regulation of female receptivity" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008049 "male courtship behavior"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 EMBL:AE013599 GO:GO:0005634 GO:GO:0007411
GO:GO:0045893 GO:GO:0009952 GO:GO:0007435 GO:GO:0048477
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0007517
GO:GO:0045924 GO:GO:0008049 GO:GO:0000976 GO:GO:0009880
GO:GO:0042063 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 eggNOG:NOG327790 InterPro:IPR023334
PROSITE:PS51486 EMBL:U62542 EMBL:AY118955 PIR:JC6093
RefSeq:NP_476864.2 RefSeq:NP_788434.1 UniGene:Dm.20640 PDB:1C20
PDB:1KQQ PDBsum:1C20 PDBsum:1KQQ ProteinModelPortal:Q24573
SMR:Q24573 STRING:Q24573 PaxDb:Q24573 EnsemblMetazoa:FBtr0072073
GeneID:45976 KEGG:dme:Dmel_CG5403 CTD:56729 FlyBase:FBgn0004795
InParanoid:Q24573 OMA:MEYLQLI OrthoDB:EOG4C2FTG PhylomeDB:Q24573
EvolutionaryTrace:Q24573 GenomeRNAi:45976 NextBio:838560
Bgee:Q24573 GermOnline:CG5403 Uniprot:Q24573
Length = 911
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 76 GGGGAGTDELP--ESTSKTNGDDT-HVENEPKTNTSVTPIPHGESSTSKAEDESVRKSKN 132
GGGG G + T+ +G + H +N+S + E+S S ++ +
Sbjct: 225 GGGGVGGHQFSFASPTAAPSGKEARHFAANSASNSSTS----SEASNSSQQNNGWSFEEQ 280
Query: 133 WLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLG 191
+ ++ E ++ P+ + EF+ ++ SF ++ + P L+ +L+ V+ G
Sbjct: 281 FKQVRQLYEINDD-PKRK-EFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARG 338
Query: 192 GYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE-KHKRLSGELQLPAS 248
G V KLW+++ + H P + T+ ++T R Y K L YE + K LS +L A+
Sbjct: 339 GLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAA 396
>UNIPROTKB|F1LMH4 [details] [associations]
symbol:Arid4b "AT-rich interactive domain-containing
protein 4B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002999 RGD:619919 GO:GO:0003677 GO:GO:0005622
SMART:SM00333 Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR012603
Pfam:PF08169 GeneTree:ENSGT00510000046413 IPI:IPI00202459
EMBL:AC131129 Ensembl:ENSRNOT00000022445 ArrayExpress:F1LMH4
Uniprot:F1LMH4
Length = 1226
Score = 136 (52.9 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 271 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 330
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 331 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 390
Query: 232 EYEKHKRLSG---ELQLPASSFPQP 253
+E++ R + ++ LP +P
Sbjct: 391 GFEEYCRSANIDFQMALPEKVLNKP 415
Score = 46 (21.3 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 23/95 (24%), Positives = 39/95 (41%)
Query: 296 EPI-IKDKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQ--IITEIVDVGPPAD 352
+P+ + D+ P+ + N P T +S +TE +Q +T V + P +
Sbjct: 914 KPLEVSDRKTEFPSSGSNSVLNT--PPT-TPESPSSVTVTETSQQQSSVTVSVPLPPNQE 970
Query: 353 WVKINVREAKDCYEVYALVPGLLREEVRVQSDPAG 387
V+ E EV ++V L + S PAG
Sbjct: 971 EVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAG 1005
Score = 37 (18.1 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 42 RETAEDKPETLPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVEN 101
R AE ETL + PE T + K+ G ++ +PE S ++ D ++
Sbjct: 111 RHFAES--ETLDQLPLTNPEHF---GTPVIGKKTNRGRR-SNHIPEEESSSSSSDDDEDD 164
Query: 102 EPKTN 106
+T+
Sbjct: 165 RKQTD 169
>RGD|619919 [details] [associations]
symbol:Arid4b "AT rich interactive domain 4B (Rbp1 like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=ISO] [GO:0036124 "histone H3-K9 trimethylation"
evidence=ISO] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 InterPro:IPR002999 RGD:619919 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG248805
HOGENOM:HOG000015398 HOVERGEN:HBG058247 InterPro:IPR012603
Pfam:PF08169 HSSP:Q14865 CTD:51742 EMBL:AF245512 IPI:IPI00202459
RefSeq:NP_445873.1 UniGene:Rn.47249 ProteinModelPortal:Q9JKB5
STRING:Q9JKB5 PRIDE:Q9JKB5 GeneID:84481 KEGG:rno:84481
UCSC:RGD:619919 NextBio:617002 ArrayExpress:Q9JKB5
Genevestigator:Q9JKB5 Uniprot:Q9JKB5
Length = 1228
Score = 136 (52.9 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 272 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 331
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 332 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 391
Query: 232 EYEKHKRLSG---ELQLPASSFPQP 253
+E++ R + ++ LP +P
Sbjct: 392 GFEEYCRSANIDFQMALPEKVLNKP 416
Score = 46 (21.3 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 23/95 (24%), Positives = 39/95 (41%)
Query: 296 EPI-IKDKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQ--IITEIVDVGPPAD 352
+P+ + D+ P+ + N P T +S +TE +Q +T V + P +
Sbjct: 916 KPLEVSDRKTEFPSSGSNSVLNT--PPT-TPESPSSVTVTETSQQQSSVTVSVPLPPNQE 972
Query: 353 WVKINVREAKDCYEVYALVPGLLREEVRVQSDPAG 387
V+ E EV ++V L + S PAG
Sbjct: 973 EVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAG 1007
Score = 37 (18.1 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 42 RETAEDKPETLPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVEN 101
R AE ETL + PE T + K+ G ++ +PE S ++ D ++
Sbjct: 112 RHFAES--ETLDQLPLTNPEHF---GTPVIGKKTNRGRR-SNHIPEEESSSSSSDDDEDD 165
Query: 102 EPKTN 106
+T+
Sbjct: 166 RKQTD 170
>UNIPROTKB|F1MNB5 [details] [associations]
symbol:ARID4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 OMA:FRLVHKL GeneTree:ENSGT00510000046413
EMBL:DAAA02061466 EMBL:DAAA02061464 EMBL:DAAA02061465
IPI:IPI00705177 Ensembl:ENSBTAT00000061477 Uniprot:F1MNB5
Length = 1319
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENA---LEFK 169
+SS+S+AE+E + + N E E E PEE+ F++++ F + + +
Sbjct: 272 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRVGTPINKR 331
Query: 170 PPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKA 229
P Y LN KL+R V +LGG++ + + +W+QV + P + + + Y+K
Sbjct: 332 PVLGYRN-LNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKY 390
Query: 230 LLEYEKHKRLSG-ELQL 245
L +E++ R + E Q+
Sbjct: 391 LYGFEEYCRSANIEFQM 407
>UNIPROTKB|E1BGK1 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00298 SMART:SM00501 InterPro:IPR002999 GO:GO:0017053
GO:GO:0045892 GO:GO:0003677 SMART:SM00333 Gene3D:1.10.150.60
SUPFAM:SSF46774 CTD:5926 OMA:TCSIIVQ InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 GeneTree:ENSGT00510000046413 EMBL:DAAA02029263
EMBL:DAAA02029264 IPI:IPI00685606 RefSeq:NP_001243510.1
UniGene:Bt.32819 ProteinModelPortal:E1BGK1
Ensembl:ENSBTAT00000025155 GeneID:531515 KEGG:bta:531515
NextBio:20875474 Uniprot:E1BGK1
Length = 1261
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 123 EDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCL 181
E+E +++K + EM E +E PEE+ F++++ F + KPP + LN
Sbjct: 288 EEEKEKEAKK--EEEEMPE-EEPDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLF 344
Query: 182 KLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSG 241
KL+R V GG + + + +W+Q+ P + S+ + Y K L +E++ R S
Sbjct: 345 KLFRLVYHQGGCDSIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCR-SA 403
Query: 242 ELQLPASSFPQP 253
+Q +P
Sbjct: 404 NIQFRTIHHHEP 415
>MGI|MGI:2137512 [details] [associations]
symbol:Arid4b "AT rich interactive domain 4B (RBP1-like)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=IGI] [GO:0036124 "histone H3-K9 trimethylation"
evidence=IGI] InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00298 SMART:SM00501 InterPro:IPR002999
MGI:MGI:2137512 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SMART:SM00333 GO:GO:0006349 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG248805 HOVERGEN:HBG058247
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160 CTD:51742 OMA:FRLVHKL
ChiTaRS:ARID4B EMBL:CT025604 EMBL:BC137783 EMBL:AK031062
EMBL:AK041414 IPI:IPI00380954 IPI:IPI00776412 RefSeq:NP_919238.1
RefSeq:NP_937755.1 UniGene:Mm.439784 ProteinModelPortal:A2CG63
SMR:A2CG63 IntAct:A2CG63 STRING:A2CG63 PhosphoSite:A2CG63
PaxDb:A2CG63 PRIDE:A2CG63 Ensembl:ENSMUST00000039538
Ensembl:ENSMUST00000110533 Ensembl:ENSMUST00000110534
Ensembl:ENSMUST00000110536 Ensembl:ENSMUST00000129488 GeneID:94246
KEGG:mmu:94246 UCSC:uc007pmz.1 UCSC:uc007pna.1
GeneTree:ENSGT00510000046413 InParanoid:B2RQ67 OrthoDB:EOG4GQQ47
NextBio:352259 Bgee:A2CG63 CleanEx:MM_ARID4B Genevestigator:A2CG63
GO:GO:0036124 GO:GO:0034773 Uniprot:A2CG63
Length = 1314
Score = 136 (52.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 116 ESSTSKAEDESVRKS---KNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPP 171
+SS+S+AE+E + + N E E E PEE+ F++++ F + K P
Sbjct: 272 DSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRP 331
Query: 172 KFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALL 231
LN KL+R V +LGG++ + + +W+QV + P + + + Y+K L
Sbjct: 332 VLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLY 391
Query: 232 EYEKHKRLSG---ELQLPASSFPQP 253
+E++ R + ++ LP +P
Sbjct: 392 GFEEYCRSANIDFQMALPEKVLNKP 416
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 42 RETAEDKPETLPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTNGDDTHVEN 101
R AE ETL + PE T + K+ G ++ +PE S ++ D E
Sbjct: 112 RHFAES--ETLDQLPLTNPEHF---GTPVIGKKTNRGRR-SNHIPEEESSSSSSDDDEEE 165
Query: 102 EPKTN 106
+T+
Sbjct: 166 RKQTD 170
>UNIPROTKB|F1NPA3 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 GeneTree:ENSGT00510000046413 EMBL:AC145958
IPI:IPI00582216 Ensembl:ENSGALT00000000022 ArrayExpress:F1NPA3
Uniprot:F1NPA3
Length = 1250
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 32/139 (23%), Positives = 68/139 (48%)
Query: 116 ESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFY 174
+ + ++ ++E +++ + N+ + E +E PEE+ F++++ F + KPP
Sbjct: 279 DGAAAETDEEEIKREEK--NEEVLPE-EELDPEERDNFLQQLYKFMEDRGTPINKPPVLG 335
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
+ LN KL+R V + GG + + + +W+Q+ P + S+ + Y K L +E
Sbjct: 336 YKDLNLFKLFRLVYQQGGCDNIESGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFE 395
Query: 235 KHKRLSGELQLPASSFPQP 253
++ R S +Q +P
Sbjct: 396 EYCR-SANIQFRTIHHNEP 413
>UNIPROTKB|F1NG14 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 GeneTree:ENSGT00510000046413 EMBL:AC145958
IPI:IPI00573660 Ensembl:ENSGALT00000019652 ArrayExpress:F1NG14
Uniprot:F1NG14
Length = 1252
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 32/139 (23%), Positives = 68/139 (48%)
Query: 116 ESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFY 174
+ + ++ ++E +++ + N+ + E +E PEE+ F++++ F + KPP
Sbjct: 281 DGAAAETDEEEIKREEK--NEEVLPE-EELDPEERDNFLQQLYKFMEDRGTPINKPPVLG 337
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
+ LN KL+R V + GG + + + +W+Q+ P + S+ + Y K L +E
Sbjct: 338 YKDLNLFKLFRLVYQQGGCDNIESGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFE 397
Query: 235 KHKRLSGELQLPASSFPQP 253
++ R S +Q +P
Sbjct: 398 EYCR-SANIQFRTIHHNEP 415
>UNIPROTKB|F1PVK5 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 GO:GO:0005634 GO:GO:0003677 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 CTD:5926 OMA:TCSIIVQ
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
GeneTree:ENSGT00510000046413 EMBL:AAEX03005757 RefSeq:XP_537461.3
Ensembl:ENSCAFT00000024422 GeneID:480339 KEGG:cfa:480339
Uniprot:F1PVK5
Length = 1258
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 34/133 (25%), Positives = 59/133 (44%)
Query: 122 AEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNC 180
AE+ K K + E +E PEE+ F++++ F + KPP + LN
Sbjct: 284 AEENDEEKEKEAKKEEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNL 343
Query: 181 LKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLS 240
KL+R V GG + + + +W+Q+ P + S+ + Y K L +E++ R S
Sbjct: 344 FKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCR-S 402
Query: 241 GELQLPASSFPQP 253
+Q +P
Sbjct: 403 ANIQFRTVHHHEP 415
>UNIPROTKB|F1SSK5 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00298 SMART:SM00501 InterPro:IPR002999 GO:GO:0017053
GO:GO:0045892 GO:GO:0003677 SMART:SM00333 Gene3D:1.10.150.60
SUPFAM:SSF46774 OMA:TCSIIVQ InterPro:IPR016197 InterPro:IPR012603
InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
GeneTree:ENSGT00510000046413 EMBL:FP312661
Ensembl:ENSSSCT00000005590 Uniprot:F1SSK5
Length = 1259
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 123 EDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCL 181
E+E +++K + EM E +E PEE+ F++++ F + KPP + LN
Sbjct: 289 EEEKEKEAKK--EEEEMPE-EELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLF 345
Query: 182 KLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSG 241
KL+R V GG + + + +W+Q+ P + S+ + Y K L +E++ R S
Sbjct: 346 KLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCR-SA 404
Query: 242 ELQLPASSFPQP 253
+Q +P
Sbjct: 405 NIQFRTVHHHEP 416
>UNIPROTKB|F1NG15 [details] [associations]
symbol:ARID4A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00298 SMART:SM00501 InterPro:IPR002999 GO:GO:0017053
GO:GO:0045892 GO:GO:0003677 SMART:SM00333 Gene3D:1.10.150.60
SUPFAM:SSF46774 OMA:TCSIIVQ InterPro:IPR016197 InterPro:IPR012603
InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
GeneTree:ENSGT00510000046413 EMBL:AC145958 IPI:IPI00602511
Ensembl:ENSGALT00000019651 ArrayExpress:F1NG15 Uniprot:F1NG15
Length = 1273
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 32/139 (23%), Positives = 68/139 (48%)
Query: 116 ESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFY 174
+ + ++ ++E +++ + N+ + E +E PEE+ F++++ F + KPP
Sbjct: 279 DGAAAETDEEEIKREEK--NEEVLPE-EELDPEERDNFLQQLYKFMEDRGTPINKPPVLG 335
Query: 175 GEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYE 234
+ LN KL+R V + GG + + + +W+Q+ P + S+ + Y K L +E
Sbjct: 336 YKDLNLFKLFRLVYQQGGCDNIESGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFE 395
Query: 235 KHKRLSGELQLPASSFPQP 253
++ R S +Q +P
Sbjct: 396 EYCR-SANIQFRTIHHNEP 413
>UNIPROTKB|F1NAR1 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9031 "Gallus gallus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0001822 "kidney development" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0030325 "adrenal gland development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0048008 "platelet-derived growth factor receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0051091 GO:GO:0005622 GO:GO:0044212
GO:GO:0048008 GO:GO:0003713 GO:GO:0045444 GO:GO:0006807
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00510000046413
GO:GO:0010761 IPI:IPI00580568 OMA:ILPYERF EMBL:AADN02035211
EMBL:AADN02035212 EMBL:AADN02035213 Ensembl:ENSGALT00000004734
Uniprot:F1NAR1
Length = 1092
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 50/215 (23%), Positives = 89/215 (41%)
Query: 90 SKTNGDDTHVENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEE 149
S N + V S P P +S K + S KSK I +GE E +E
Sbjct: 180 SNNNSESKAVAKVKCEAKSALPKPKSNNSNCK-KGSSEDKSK-----IAVGE--ECRADE 231
Query: 150 QAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGES 208
QA F+ + + +E + + G + +N +++A +LGGYE +TA + W+ + +
Sbjct: 232 QA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 290
Query: 209 FHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASGY-QTPG 267
T+ + R YE+ +L YE+ + + LP + N+ +E + G
Sbjct: 291 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPVKPRKQDNSSQEGEAKTKVSG 350
Query: 268 SSXXXXXXXXXXMQGWHAQRLLGHGEVAEPIIKDK 302
+ + +AQ+ EV+ KD+
Sbjct: 351 TKRIKNENQKSKKEKDNAQKPQDASEVSSEQEKDQ 385
>UNIPROTKB|Q5ZJ69 [details] [associations]
symbol:ARID5B "AT-rich interactive domain-containing
protein 5B" species:9031 "Gallus gallus" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0060612 "adipose tissue development" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0051091 GO:GO:0060612 GO:GO:0006351
GO:GO:0044212 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q14865
EMBL:AJ720565 IPI:IPI00580568 RefSeq:NP_001026391.1
UniGene:Gga.22372 ProteinModelPortal:Q5ZJ69 SMR:Q5ZJ69
GeneID:423661 KEGG:gga:423661 CTD:84159 eggNOG:NOG115121
HOGENOM:HOG000034051 HOVERGEN:HBG050575 InParanoid:Q5ZJ69
OrthoDB:EOG4N5VW9 NextBio:20826099 Uniprot:Q5ZJ69
Length = 1185
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 50/215 (23%), Positives = 89/215 (41%)
Query: 90 SKTNGDDTHVENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEE 149
S N + V S P P +S K + S KSK I +GE E +E
Sbjct: 273 SNNNSESKAVAKVKCEAKSALPKPKSNNSNCK-KGSSEDKSK-----IAVGE--ECRADE 324
Query: 150 QAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGES 208
QA F+ + + +E + + G + +N +++A +LGGYE +TA + W+ + +
Sbjct: 325 QA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 383
Query: 209 FHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASGY-QTPG 267
T+ + R YE+ +L YE+ + + LP + N+ +E + G
Sbjct: 384 LGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPVKPRKQDNSSQEGEAKTKVSG 443
Query: 268 SSXXXXXXXXXXMQGWHAQRLLGHGEVAEPIIKDK 302
+ + +AQ+ EV+ KD+
Sbjct: 444 TKRIKNENQKSKKEKDNAQKPQDASEVSSEQEKDQ 478
>ZFIN|ZDB-GENE-050809-105 [details] [associations]
symbol:arid4a "AT rich interactive domain 4A
(RBP1-like)" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00298 SMART:SM00501
InterPro:IPR002999 ZFIN:ZDB-GENE-050809-105 GO:GO:0005634
GO:GO:0003677 SMART:SM00333 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR016197 InterPro:IPR012603 InterPro:IPR025995
Pfam:PF08169 Pfam:PF11717 SUPFAM:SSF54160
GeneTree:ENSGT00510000046413 EMBL:CU076099 EMBL:FP102895
IPI:IPI00997065 Ensembl:ENSDART00000128291
Ensembl:ENSDART00000151847 Uniprot:F1QWQ1
Length = 1332
Score = 125 (49.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 116 ESSTSKAEDESV----RKSKNWLNDIEMGEAD-EGTPEEQAEFMKEIESFYRENALEF-K 169
ESS+S +DE ++ + + E E D E PEE+ F++++ F + K
Sbjct: 272 ESSSSDEDDEDEDGEGKEGEEEEKEPEPEEPDDEPDPEERDHFLQQLYKFMEDRGTPINK 331
Query: 170 PPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKA 229
PP + LN KL+R V GG + + + +W+Q+ P + S+ + Y K
Sbjct: 332 PPVLGYKDLNLFKLFRLVHIHGGCDNIESGSIWKQIYMDLGIPVLNSAASYNVKTAYRKY 391
Query: 230 LLEYEKHKRLSGELQLPASSFPQP 253
L +E++ R S ++Q +P
Sbjct: 392 LYGFEEYCR-SAQIQFRTVHHNEP 414
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 28/118 (23%), Positives = 48/118 (40%)
Query: 297 PIIKDKSLP--SPARREKQLKNIGLPKNRTLDSAEKAALTEADKQIITEIVDVGPPADWV 354
P+ K + P SP R K ++ G + + + T A K+ I E P +
Sbjct: 879 PVKKSQETPHSSPVERIKLVETAGSDTDSATEDIDPPERTSAAKRKINE---QRTPEKKI 935
Query: 355 KINVREAKDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVI 412
+++ +E P E + +S+ R I +PE+ NP +P K+V I
Sbjct: 936 RLDRKEEPKTPSPVKTSP----LEKKPESEK--RTEIVQKPEEPPNPTLSSPSKEVEI 987
Score = 38 (18.4 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 34 SENGQSSCRETAEDKPETLPSVDE 57
+ G+ S + AED+ E+ S D+
Sbjct: 140 TNRGRRSSQAVAEDEKESSSSEDD 163
>UNIPROTKB|F1S6T2 [details] [associations]
symbol:ARID3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 CTD:1820 OMA:NGIMYTG
InterPro:IPR023334 PROSITE:PS51486 EMBL:FP475994
RefSeq:XP_003354004.1 Ensembl:ENSSSCT00000014658 GeneID:100622803
KEGG:ssc:100622803 Uniprot:F1S6T2
Length = 596
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 52/213 (24%), Positives = 81/213 (38%)
Query: 43 ETAEDKPETLPSVDEVFPEKSDAEATAGVNTKSGGGGAGTDELPESTSKTN---GDDTHV 99
E ED E L +E E D E G+ G T P GD
Sbjct: 135 EEEEDLEEDLGDEEEEEEEDEDYEDEEGLGPPGSAGLGPTTLFPRKAQPLQAFRGDGGSR 194
Query: 100 ENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADE--GTPEEQAEFMKEI 157
+ P H + A +W + + + E G P+ + EF+ ++
Sbjct: 195 ALGGQERPGAGPA-HPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPKRK-EFLDDL 252
Query: 158 ESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCT 216
SF ++ + P + L+ L+ V GG V KLWR++ + + P + T
Sbjct: 253 FSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSIT 312
Query: 217 TVSWTFRIFYEKALLEYEKHKR-LSGELQLPAS 248
+ ++T R Y K L YE KR LS +L A+
Sbjct: 313 SAAFTLRTQYMKYLYPYECEKRGLSNPNELQAA 345
>UNIPROTKB|E1C9H0 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355 SMART:SM00501
GO:GO:0006355 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337 Gene3D:1.10.150.60
SUPFAM:SSF46774 OMA:IQNSIPQ GeneTree:ENSGT00390000016138
EMBL:AADN02010001 EMBL:AADN02010002 EMBL:AADN02010003
IPI:IPI00593469 Ensembl:ENSGALT00000015735 Uniprot:E1C9H0
Length = 1831
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 153 FMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F+ E+ F+ FK P G+ L+ L+ V LGG+ V+ W ++ E F+
Sbjct: 19 FLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNF 78
Query: 212 PKTCTTVSWTFRIFYEKALLEYEK--HKRLSGELQLPASSFPQ-PTNAGKEASGYQ 264
P++C+ ++ + +Y + L +YEK H E P + PQ P A + YQ
Sbjct: 79 PRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDEEVQPGNPKPQLPIGAIPTSYNYQ 134
>UNIPROTKB|Q68CP9 [details] [associations]
symbol:ARID2 "AT-rich interactive domain-containing protein
2" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006337 "nucleosome disassembly" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 EMBL:DQ096628 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0016568 GO:GO:0006337
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AY727870 EMBL:AL832200
EMBL:BX537879 EMBL:CR749833 EMBL:AK027718 EMBL:AK127872
EMBL:BC090062 EMBL:AB046777 IPI:IPI00444237 IPI:IPI00470537
IPI:IPI00647133 RefSeq:NP_689854.2 UniGene:Hs.317304
ProteinModelPortal:Q68CP9 SMR:Q68CP9 DIP:DIP-33391N IntAct:Q68CP9
STRING:Q68CP9 PhosphoSite:Q68CP9 DMDM:73921721 PaxDb:Q68CP9
PRIDE:Q68CP9 DNASU:196528 Ensembl:ENST00000334344 GeneID:196528
KEGG:hsa:196528 UCSC:uc001ror.3 CTD:196528 GeneCards:GC12P046123
HGNC:HGNC:18037 MIM:609539 neXtProt:NX_Q68CP9 PharmGKB:PA134916396
eggNOG:NOG311317 HOVERGEN:HBG068777 InParanoid:Q68CP9 KO:K11765
OMA:IQNSIPQ OrthoDB:EOG49KFPP GenomeRNAi:196528 NextBio:89525
PMAP-CutDB:Q68CP9 ArrayExpress:Q68CP9 Bgee:Q68CP9
Genevestigator:Q68CP9 Uniprot:Q68CP9
Length = 1835
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 147 PEEQAE---FMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
P+E+ + F+ E+ F+ FK P G+ L+ L+ V LGG+ V+ W
Sbjct: 10 PDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQW 69
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK-HKRLSGELQLPASS-FPQ-PTNAGKE 259
++ E F+ P++C+ ++ + +Y + L +YEK H + ++P + PQ P A
Sbjct: 70 GEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPS 129
Query: 260 ASGYQ 264
+ YQ
Sbjct: 130 SYNYQ 134
>UNIPROTKB|P29374 [details] [associations]
symbol:ARID4A "AT-rich interactive domain-containing
protein 4A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000953
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00298
SMART:SM00501 InterPro:IPR002999 GO:GO:0017053 GO:GO:0045892
GO:GO:0003677 GO:GO:0003700 GO:GO:0006366 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:S66427 EMBL:AL132989
EMBL:AL139021 EMBL:S57153 EMBL:S57160 EMBL:S57162 IPI:IPI00218648
IPI:IPI00296069 IPI:IPI00328418 PIR:I58383 RefSeq:NP_002883.3
RefSeq:NP_075376.2 RefSeq:NP_075377.2 UniGene:Hs.161000 PDB:2LCC
PDB:2LCD PDB:2YRV PDBsum:2LCC PDBsum:2LCD PDBsum:2YRV
ProteinModelPortal:P29374 SMR:P29374 DIP:DIP-463N IntAct:P29374
STRING:P29374 PhosphoSite:P29374 DMDM:206729929 PaxDb:P29374
PRIDE:P29374 DNASU:5926 Ensembl:ENST00000348476
Ensembl:ENST00000355431 Ensembl:ENST00000395168
Ensembl:ENST00000431317 GeneID:5926 KEGG:hsa:5926 UCSC:uc001xdo.3
UCSC:uc001xdp.3 UCSC:uc001xdq.3 CTD:5926 GeneCards:GC14P058766
H-InvDB:HIX0037655 HGNC:HGNC:9885 HPA:HPA048899 MIM:180201
neXtProt:NX_P29374 PharmGKB:PA34249 eggNOG:NOG248805
HOGENOM:HOG000015398 HOVERGEN:HBG058247 InParanoid:P29374
OMA:TCSIIVQ OrthoDB:EOG498V0C PhylomeDB:P29374 ChiTaRS:ARID4A
EvolutionaryTrace:P29374 GenomeRNAi:5926 NextBio:23080
ArrayExpress:P29374 Bgee:P29374 CleanEx:HS_ARID4A CleanEx:HS_RBP1
Genevestigator:P29374 GermOnline:ENSG00000032219 InterPro:IPR016197
InterPro:IPR012603 InterPro:IPR025995 Pfam:PF08169 Pfam:PF11717
SUPFAM:SSF54160 Uniprot:P29374
Length = 1257
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 34/133 (25%), Positives = 58/133 (43%)
Query: 122 AEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNC 180
AE+ K K E +E PEE+ F++++ F + KPP + LN
Sbjct: 284 AEENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNL 343
Query: 181 LKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLS 240
KL+R V GG + + + +W+Q+ P + S+ + Y K L +E++ R S
Sbjct: 344 FKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCR-S 402
Query: 241 GELQLPASSFPQP 253
+Q +P
Sbjct: 403 ANIQFRTVHHHEP 415
>UNIPROTKB|F1NAK8 [details] [associations]
symbol:LOC100858693 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
EMBL:AADN02068975 EMBL:AADN02068976 IPI:IPI00651600
Ensembl:ENSGALT00000009379 OMA:RQTFGTA Uniprot:F1NAK8
Length = 368
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 138 EMGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVV 196
++ E DE P+ + EF+ ++ SF ++ + P + L+ L+R V GG V
Sbjct: 82 QLYELDED-PKRK-EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYTLYRLVTDKGGLVEV 139
Query: 197 TASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LS--GELQLPASS 249
K+WR++ + + P + T+ + T R Y K L YE KR LS GELQ S
Sbjct: 140 INKKIWREITKGLNLPTSITSAALTVRTQYMKYLYPYECEKRALSSPGELQAAIDS 195
>UNIPROTKB|C9J1Q0 [details] [associations]
symbol:ARID5A "AT rich interactive domain 5A (MRF1-like),
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002062 "chondrocyte differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0035066 "positive regulation of histone acetylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
HOGENOM:HOG000034050 UniGene:Hs.920 HGNC:HGNC:17361 ChiTaRS:ARID5A
EMBL:CH471207 EMBL:AC013270 IPI:IPI00925645 SMR:C9J1Q0
STRING:C9J1Q0 Ensembl:ENST00000454558 Uniprot:C9J1Q0
Length = 526
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 162 RENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWT 221
R +E + P + +N K+++AV +LG YE+VT +LW+ V + T+ +
Sbjct: 4 RHTPIE-RVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATC 62
Query: 222 FRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAGKEASG 262
R YE+ +L Y +H + + LP S + KE G
Sbjct: 63 TRRHYERLVLPYVRHLKGEDDKPLPTSKPRKQYKMAKENRG 103
>UNIPROTKB|G3MWU0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:DAAA02023880 Ensembl:ENSBTAT00000064321 Uniprot:G3MWU0
Length = 385
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 51/175 (29%), Positives = 76/175 (43%)
Query: 81 GTDELPESTSKTNGDDTHVENEPKTNTSVTPI--PHGESSTSKAEDESVRKSKNWLNDIE 138
G DE E D+ E+ P T S +P P G +E ++ L +++
Sbjct: 63 GQDEEEEEAGAE--DEAAKESRPGTRGSSSPSSQPPGPHPHEWTYEEQFKQ----LYELD 116
Query: 139 MGEADEGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVT 197
AD P+ + EF+ ++ SF ++ + P + L+ L+R V GG V
Sbjct: 117 ---AD---PKRK-EFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVI 169
Query: 198 ASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LS--GELQLPASS 249
K+WR+V P T T+ ++T R Y K L YE R LS GELQ S
Sbjct: 170 NRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDS 224
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.130 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 435 0.00087 118 3 11 23 0.37 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 615 (65 KB)
Total size of DFA: 277 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.01u 0.10s 42.11t Elapsed: 00:00:02
Total cpu time: 42.01u 0.11s 42.12t Elapsed: 00:00:02
Start: Sat May 11 15:12:44 2013 End: Sat May 11 15:12:46 2013