BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012818
(456 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WNR6|ARID5_ARATH AT-rich interactive domain-containing protein 5 OS=Arabidopsis
thaliana GN=ARID5 PE=2 SV=1
Length = 434
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/321 (68%), Positives = 258/321 (80%), Gaps = 3/321 (0%)
Query: 115 GESSTSKAEDESVRKSKNWL-NDIEMGEADE-GTPEEQAEFMKEIESFYRENALEFKPPK 172
G+ S+ +ESV+K K WL +D E E DE G P++Q F+KE+E+F +EN LEFK PK
Sbjct: 108 GDPSSPHVPEESVKKWKTWLLSDAEAREVDEAGAPQDQEAFIKEVEAFNKENFLEFKAPK 167
Query: 173 FYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLE 232
FYG+PLNCLKLWRAV++LGGY+VVT SKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLE
Sbjct: 168 FYGQPLNCLKLWRAVIKLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLE 227
Query: 233 YEKHKRLSGELQLPASSFPQPTNAGKEASGYQTPGSSRARRDAAARAMQGWHAQRLLGHG 292
YEKH R +GEL LP S+ + KEAS +Q GS R RRDAAARAMQGWH+QRLLG G
Sbjct: 228 YEKHLRQNGELNLPGSASLPSSGIEKEASSHQASGSGRTRRDAAARAMQGWHSQRLLGSG 287
Query: 293 EVAEPIIKDKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQIITEIVDVGPPAD 352
EV EPI+K+K L S ++K LKNIG+ K +T + E++KQ E++DVGPPAD
Sbjct: 288 EVTEPIVKEKGLNS-TPKQKNLKNIGVQKQKTTTGMDLVFSHESEKQSTAEVIDVGPPAD 346
Query: 353 WVKINVREAKDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVI 412
WVKINVRE KDC+E++ALVPGLLREEVRVQSDPAGRLVI G+PEQ+DNPWGITPFKKVV
Sbjct: 347 WVKINVRETKDCFEIFALVPGLLREEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVN 406
Query: 413 LPSRIDPLQTSAVVSLHGRLY 433
P+RIDPL TSAVVSLHGRL+
Sbjct: 407 FPARIDPLHTSAVVSLHGRLF 427
>sp|C0SUW7|ARID6_ARATH AT-rich interactive domain-containing protein 6 OS=Arabidopsis
thaliana GN=ARID6 PE=2 SV=1
Length = 398
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/314 (65%), Positives = 251/314 (79%), Gaps = 2/314 (0%)
Query: 121 KAEDESVRKSKNWLNDIEMGEADE-GTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLN 179
K E E+ +K K WL D E DE GTP EQ F++E+E+FY+E+ LEFKPPKFYG+PLN
Sbjct: 79 KTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQPLN 138
Query: 180 CLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRL 239
LKLWRAVV LGGYEVVT +KLWRQVGESF+PPKTCTTVS+TFR FYEKALLEYEK R
Sbjct: 139 ILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYEKALLEYEKCLRN 198
Query: 240 SGELQLPASSFPQPTNAGKEASGYQTPGSSRARRDAAARAMQGWHAQRLLGHGEVAEPII 299
+GEL LP S+ ++ KE S +Q GS RARRD+AARAMQGWHAQRL+G GEV P +
Sbjct: 199 NGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQRLVGSGEVTAPAV 258
Query: 300 KDKSLPSPARREKQLKNIGLPKNRTLDSAEKAALTEADKQIITEIVDVGPPADWVKINVR 359
KDK L S + K+LK+IGL K++ S + EADKQ+ E+VDVGP ADWVKINV+
Sbjct: 259 KDKGLISTPKH-KKLKSIGLQKHKQQTSMDHVVTNEADKQLAAEVVDVGPVADWVKINVK 317
Query: 360 EAKDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVILPSRIDP 419
E+KD +E++ALVPGLLR+EVR+QSDPAG++VITG+PEQ+DNPWGITPFKK+V L +RIDP
Sbjct: 318 ESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDLSARIDP 377
Query: 420 LQTSAVVSLHGRLY 433
L TSAV+S+HGRL+
Sbjct: 378 LHTSAVMSMHGRLF 391
>sp|Q940Y3|ARID3_ARATH AT-rich interactive domain-containing protein 3 OS=Arabidopsis
thaliana GN=ARID3 PE=2 SV=1
Length = 786
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/312 (62%), Positives = 236/312 (75%), Gaps = 7/312 (2%)
Query: 124 DESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLNCLKL 183
D ++R +++L D + GT E+Q+ FMKE++SF+RE ++FKPPKFYGE LNCLKL
Sbjct: 471 DGTMRAKRSFLLDDASDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKL 530
Query: 184 WRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGEL 243
WRAV RLGGY+ VT SKLWRQVGESF PPKTCTTVSWTFR FYEKALLEYE+HK GEL
Sbjct: 531 WRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALLEYERHKVSEGEL 590
Query: 244 QLPASSFPQPTNAGKEASGYQTPGSSRARRDAAARAMQGWHAQRLLGHGEVAEPIIKDKS 303
Q+P +P N +AS GS RARRDAA+RAMQGWH+QRL G+GEV++P IKDK+
Sbjct: 591 QIPLPLELEPMNIDNQAS-----GSGRARRDAASRAMQGWHSQRLNGNGEVSDPAIKDKN 645
Query: 304 LPSPARREKQLKNIG--LPKNRTLDSAEKAALTEADKQIITEIVDVGPPADWVKINVREA 361
L +REKQ+ L + R + K A+ + + +VDVGPPADWVKINV+
Sbjct: 646 LVLHQKREKQIGTTPGLLKRKRAAEHGAKNAIHVSKSMLDVTVVDVGPPADWVKINVQRT 705
Query: 362 KDCYEVYALVPGLLREEVRVQSDPAGRLVITGEPEQVDNPWGITPFKKVVILPSRIDPLQ 421
+DC+EVYALVPGL+REEVRVQSDPAGRLVI+GEPE NPWG TPFKKVV LP+RIDP
Sbjct: 706 QDCFEVYALVPGLVREEVRVQSDPAGRLVISGEPENPMNPWGATPFKKVVSLPTRIDPHH 765
Query: 422 TSAVVSLHGRLY 433
TSAVV+L+G+L+
Sbjct: 766 TSAVVTLNGQLF 777
>sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9 OS=Arabidopsis thaliana GN=HMGB9
PE=2 SV=1
Length = 338
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 148 EEQAEFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGE 207
++ + F + F+ + +F P G+ L+ L+ V R GGYE V K WR+VG
Sbjct: 39 KDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGG 98
Query: 208 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLS--GELQLPASSF-PQPTNAGKEASGYQ 264
F T T+ S+ R Y L YE+ + G L P ++F P+ + + A
Sbjct: 99 VFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHANPSTSKEMALVEY 158
Query: 265 TPGSSR 270
TP S R
Sbjct: 159 TPPSIR 164
>sp|Q68CP9|ARID2_HUMAN AT-rich interactive domain-containing protein 2 OS=Homo sapiens
GN=ARID2 PE=1 SV=2
Length = 1835
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 153 FMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F+ E+ F+ FK P G+ L+ L+ V LGG+ V+ W ++ E F+
Sbjct: 19 FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78
Query: 212 PKTCTTVSWTFRIFYEKALLEYEK 235
P++C+ ++ + +Y + L +YEK
Sbjct: 79 PRSCSNAAFALKQYYLRYLEKYEK 102
>sp|O02326|CFI1_CAEEL AT-rich interactive domain-containing protein cfi-1
OS=Caenorhabditis elegans GN=cfi-1 PE=1 SV=3
Length = 467
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 171 PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKAL 230
P + L+ +L+R VV+ GG + KLWR++ + + P + T+ ++T R Y+K L
Sbjct: 206 PIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYL 265
Query: 231 LEYEKHK-RLSGELQL 245
+YE K +LS + L
Sbjct: 266 YDYECEKEKLSNQSDL 281
>sp|A2BEA6|ARI3A_DANRE AT-rich interactive domain-containing protein 3A OS=Danio rerio
GN=arid3a PE=1 SV=1
Length = 570
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 148 EEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVG 206
E++ EF+ ++ SF ++ + P + L+ L++ V GG V K+WR++
Sbjct: 233 EKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYTLYKLVTEKGGLVEVINKKIWREIT 292
Query: 207 ESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LS--GELQ 244
+ + P + T+ ++T R Y K L YE KR LS GELQ
Sbjct: 293 KGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSSPGELQ 333
>sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15
PE=2 SV=1
Length = 448
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
FM +E + +F P G L+ KL+ V GG + + W++V +F P
Sbjct: 35 FMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFP 94
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPT 254
T T S+ R +Y L YE+ Q+P S P+
Sbjct: 95 PTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPS 136
>sp|Q24573|DRI_DROME Protein dead ringer OS=Drosophila melanogaster GN=retn PE=1 SV=2
Length = 911
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 152 EFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFH 210
EF+ ++ SF ++ + P L+ +L+ V+ GG V KLW+++ + H
Sbjct: 298 EFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLH 357
Query: 211 PPKTCTTVSWTFRIFYEKALLEYEKHKR 238
P + T+ ++T R Y K L YE K+
Sbjct: 358 LPSSITSAAFTLRTQYMKYLYPYECEKK 385
>sp|Q99856|ARI3A_HUMAN AT-rich interactive domain-containing protein 3A OS=Homo sapiens
GN=ARID3A PE=1 SV=2
Length = 593
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
+G P+ + EF+ ++ SF ++ + P + L+ L+ V GG V KLW
Sbjct: 236 DGDPKRK-EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLW 294
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
R++ + + P + T+ ++T R Y K L YE KR
Sbjct: 295 REITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKR 330
>sp|Q6GQD7|ARI3A_XENLA AT-rich interactive domain-containing protein 3A OS=Xenopus laevis
GN=arid3a PE=2 SV=1
Length = 539
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
+G P+ + EF+ ++ SF ++ + P + L+ L+ V GG V KLW
Sbjct: 207 DGDPKRK-EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLW 265
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
R++ + + P + T+ ++T R Y K L YE KR
Sbjct: 266 REITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKR 301
>sp|Q4H3P5|DRI_CIOIN Protein dead ringer homolog OS=Ciona intestinalis GN=Ci-DRIL1/2
PE=2 SV=1
Length = 571
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 152 EFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFH 210
EF+ ++ SF ++ + P + L+ +L+R VV GG V K+WR++ + +
Sbjct: 254 EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYQLYRLVVEKGGLVEVINKKIWREITKGLN 313
Query: 211 PPKTCTTVSWTFRIFYEKALLEYE 234
P + T+ ++T R Y K L +E
Sbjct: 314 LPSSITSAAFTLRTQYMKYLYPFE 337
>sp|Q62431|ARI3A_MOUSE AT-rich interactive domain-containing protein 3A OS=Mus musculus
GN=Arid3a PE=1 SV=1
Length = 601
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 149 EQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGE 207
++ EF+ ++ SF ++ + P + L+ L+ V GG V KLWR++ +
Sbjct: 245 KRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITK 304
Query: 208 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
+ P + T+ ++T R Y K L YE +R
Sbjct: 305 GLNLPTSITSAAFTLRTQYMKYLYPYECERR 335
>sp|Q5XGD9|ARI3A_XENTR AT-rich interactive domain-containing protein 3A OS=Xenopus
tropicalis GN=arid3a PE=2 SV=1
Length = 541
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
+G P+ + EF+ ++ SF ++ + P + L+ L+ V GG V KLW
Sbjct: 210 DGDPKRK-EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLW 268
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
R++ + + P + T+ ++T R Y K L YE KR
Sbjct: 269 REITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKR 304
>sp|Q03989|ARI5A_HUMAN AT-rich interactive domain-containing protein 5A OS=Homo sapiens
GN=ARID5A PE=1 SV=2
Length = 594
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 152 EFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
+FMKE R +E P + + +N K+++AV +LG YE+VT +LW+ V +
Sbjct: 67 KFMKE-----RHTPIERVPHLGFKQ-INLWKIYKAVEKLGAYELVTGRRLWKNVYDELGG 120
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPAS 248
T+ + R YE+ +L Y +H + + LP S
Sbjct: 121 SPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPTS 157
>sp|A6PWV5|ARI3C_MOUSE AT-rich interactive domain-containing protein 3C OS=Mus musculus
GN=Arid3c PE=2 SV=2
Length = 409
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 152 EFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFH 210
EF+ ++ SF ++ + P + L+ L+R V GG V K+WR+V
Sbjct: 115 EFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLS 174
Query: 211 PPKTCTTVSWTFRIFYEKALLEYEKHKRL---SGELQ 244
P T T+ ++T R Y K L YE R GELQ
Sbjct: 175 LPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQ 211
>sp|Q3SWY1|ARI5A_BOVIN AT-rich interactive domain-containing protein 5A OS=Bos taurus
GN=ARID5A PE=2 SV=1
Length = 592
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 152 EFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
+FMKE R +E P + + +N K+++AV +LG YE+VT +LW+ V +
Sbjct: 64 KFMKE-----RHTPIERVPHLGFKQ-INLWKIYKAVEKLGAYELVTGRRLWKNVYDELGG 117
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPAS 248
T+ + R YE+ +L Y +H + + LP S
Sbjct: 118 SPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPPS 154
>sp|Q3U108|ARI5A_MOUSE AT-rich interactive domain-containing protein 5A OS=Mus musculus
GN=Arid5a PE=1 SV=1
Length = 590
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 152 EFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
+FMKE R +E P + + +N K+++AV +LG YE+VT +LW+ V +
Sbjct: 62 KFMKE-----RHTPIERVPHLGFKQ-INLWKIYKAVEKLGAYELVTGRRLWKNVYDELGG 115
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGE 242
T+ + R YE+ +L Y +H L GE
Sbjct: 116 SPGSTSAATCTRRHYERLVLPYVRH--LKGE 144
>sp|A6NKF2|ARI3C_HUMAN AT-rich interactive domain-containing protein 3C OS=Homo sapiens
GN=ARID3C PE=2 SV=1
Length = 412
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 149 EQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGE 207
++ EF+ ++ SF ++ + P + L+ L+R V GG V K+WR+V
Sbjct: 115 KRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTR 174
Query: 208 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LS--GELQ 244
P T T+ ++T R Y K L YE R LS GELQ
Sbjct: 175 GLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQ 214
>sp|Q8IVW6|ARI3B_HUMAN AT-rich interactive domain-containing protein 3B OS=Homo sapiens
GN=ARID3B PE=1 SV=2
Length = 561
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
+G PE + EF+ ++ F ++ + P + L+ L++ V GG + K+W
Sbjct: 213 DGDPERK-EFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIW 271
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LSGELQLPAS 248
R++ + + P + T+ ++T R Y K L YE K+ LS +L A+
Sbjct: 272 REITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAA 318
>sp|A2CG63|ARI4B_MOUSE AT-rich interactive domain-containing protein 4B OS=Mus musculus
GN=Arid4b PE=1 SV=1
Length = 1314
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 153 FMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F++++ F + K P LN KL+R V +LGG++ + + +W+QV +
Sbjct: 312 FLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGI 371
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKR---LSGELQLPASSFPQP 253
P + + + Y+K L +E++ R + ++ LP +P
Sbjct: 372 PVLNSAAGYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKVLNKP 416
>sp|Q9Z1N7|ARI3B_MOUSE AT-rich interactive domain-containing protein 3B OS=Mus musculus
GN=Arid3b PE=2 SV=1
Length = 568
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
+G PE + EF+ ++ F ++ + P + L+ L++ V GG + K+W
Sbjct: 211 DGDPERK-EFLDDLFIFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIW 269
Query: 203 RQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR-LSGELQLPAS 248
R++ + + P + T+ ++T R Y K L YE K+ LS +L A+
Sbjct: 270 REITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAA 316
>sp|E7F888|ARI5B_DANRE AT-rich interactive domain-containing protein 5B OS=Danio rerio
GN=arid5b PE=3 SV=1
Length = 1044
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 142 ADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASK 200
DE +EQA F+ + + +E + + G + +N +++A +LGGYEV+TA +
Sbjct: 208 GDECRTDEQA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYEVITARR 266
Query: 201 LWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK 235
W+ V + T+ + R YE+ +L YE+
Sbjct: 267 QWKNVYDELGGNPGSTSAATCTRRHYERLILPYER 301
>sp|Q9JKB5|ARI4B_RAT AT-rich interactive domain-containing protein 4B OS=Rattus
norvegicus GN=Arid4b PE=2 SV=1
Length = 1228
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 153 FMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F++++ F + K P LN KL+R V +LGG++ + + +W+QV +
Sbjct: 312 FLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGI 371
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKR---LSGELQLPASSFPQP 253
P + + + Y+K L +E++ R + ++ LP +P
Sbjct: 372 PVLNSAAGYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKVLNKP 416
>sp|Q9LTT3|HMG10_ARATH High mobility group B protein 10 OS=Arabidopsis thaliana GN=HMGB10
PE=2 SV=1
Length = 319
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 103 PKTNTSVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYR 162
P + T V P+ S + +D SV + L A F +++ +F
Sbjct: 8 PYSQTHVEPVNGYPSDNKRCDDSSVPAKYDDL------------VRNSALFWEKLRAFLG 55
Query: 163 ENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTF 222
+ K P G L+ +L+ V GG E V + W++V +F P T T+ S+
Sbjct: 56 LTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTITSASFVL 115
Query: 223 RIFYEKALLEYE 234
R +Y K L + E
Sbjct: 116 RKYYLKFLFQLE 127
>sp|Q4LE39|ARI4B_HUMAN AT-rich interactive domain-containing protein 4B OS=Homo sapiens
GN=ARID4B PE=1 SV=2
Length = 1312
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 153 FMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F++++ F + K P LN KL+R V +LGG++ + + +W+QV +
Sbjct: 312 FLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGI 371
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSG-ELQL 245
P + + + Y+K L +E++ R + E Q+
Sbjct: 372 PVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQM 406
>sp|P29374|ARI4A_HUMAN AT-rich interactive domain-containing protein 4A OS=Homo sapiens
GN=ARID4A PE=1 SV=3
Length = 1257
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 153 FMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHP 211
F++++ F + KPP + LN KL+R V GG + + + +W+Q+
Sbjct: 315 FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGI 374
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQP 253
P + S+ + Y K L +E++ R S +Q +P
Sbjct: 375 PILNSAASYNVKTAYRKYLYGFEEYCR-SANIQFRTVHHHEP 415
>sp|Q8MQH7|DRI_STRPU Protein dead ringer homolog OS=Strongylocentrotus purpuratus GN=dri
PE=2 SV=1
Length = 490
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 146 TPEEQAEFMKEIESFYRENALEF-KPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQ 204
T ++ EF+ ++ S+ ++ + P + L+ +L+ VV GG V K WR+
Sbjct: 201 TDSKRKEFLDDLFSYMQKRGTPVNRIPIMAKQVLDLYELYNLVVAKGGLVEVINKKQWRE 260
Query: 205 VGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 238
+ + + P + T+ ++T R Y K L YE K+
Sbjct: 261 ITKGLNLPASITSAAFTLRTQYMKYLYPYECEKK 294
>sp|Q5ZJ69|ARI5B_CHICK AT-rich interactive domain-containing protein 5B OS=Gallus gallus
GN=ARID5B PE=2 SV=1
Length = 1185
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 108 SVTPIPHGESSTSKAEDESVRKSKNWLNDIEMGEADEGTPEEQAEFMKEIESFYRENALE 167
S P P +S K + S KSK I +GE E +EQA F+ + + +E
Sbjct: 291 SALPKPKSNNSNCK-KGSSEDKSK-----IAVGE--ECRADEQA-FLVALYKYMKERKTP 341
Query: 168 FKPPKFYG-EPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFY 226
+ + G + +N +++A +LGGYE +TA + W+ + + T+ + R Y
Sbjct: 342 IERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHY 401
Query: 227 EKALLEYEK 235
E+ +L YE+
Sbjct: 402 ERLILPYER 410
>sp|E1BLP6|ARI5B_BOVIN AT-rich interactive domain-containing protein 5B OS=Bos taurus
GN=ARID5B PE=3 SV=1
Length = 1173
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 75 SGGGGAGTDELPESTSKTNGDDTHVENEPKTNTSVTPIPHGESSTSKAEDESVRKSKNWL 134
SGG + +S +K + N+PK N ++ K +E K
Sbjct: 269 SGGKDPNNNSDGKSVAKVKCEARSALNKPKNN---------HNNCKKVSNEEKPK----- 314
Query: 135 NDIEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGY 193
+ +GE E +EQA F+ + + +E + + G + +N +++A +LGGY
Sbjct: 315 --VAIGE--ECRADEQA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGY 369
Query: 194 EVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK 235
E +TA + W+ + + T+ + R YE+ +L YE+
Sbjct: 370 ETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYER 411
>sp|Q9LG02|HMG11_ARATH Putative high mobility group B protein 11 OS=Arabidopsis thaliana
GN=HMGB11 PE=3 SV=2
Length = 337
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
F + + F+ + +FK P G+ L+ +L+ V GG E V + ++V ++F+
Sbjct: 40 FWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRCKEVIDAFNFK 99
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
T T ++ R Y K L E+E H Q P S+F
Sbjct: 100 TTITNSAFVLRKSYLKMLFEFE-HLYY---FQAPLSTF 133
>sp|Q14865|ARI5B_HUMAN AT-rich interactive domain-containing protein 5B OS=Homo sapiens
GN=ARID5B PE=1 SV=3
Length = 1188
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 137 IEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEV 195
+ +GE E +EQA F+ + + +E + + G + +N +++A +LGGYE
Sbjct: 311 VAIGE--ECRADEQA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYET 367
Query: 196 VTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTN 255
+TA + W+ + + T+ + R YE+ +L YE+ + + LP + N
Sbjct: 368 ITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPRKQEN 427
Query: 256 AGKEA-SGYQTPGSSRARRDAAARAMQGWHAQRLLGHGEVA-------EPIIKDKSLPSP 307
+ +E + + G+ R + + + +A + EV+ E +I KS+P P
Sbjct: 428 SSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEP 487
>sp|Q8BM75|ARI5B_MOUSE AT-rich interactive domain-containing protein 5B OS=Mus musculus
GN=Arid5b PE=1 SV=3
Length = 1188
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 137 IEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEV 195
+ +GE E +EQA F+ + + +E + + G + +N +++A +LGGYE
Sbjct: 312 LSIGE--ECRADEQA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYET 368
Query: 196 VTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK 235
+TA + W+ + + T+ + R YE+ +L YE+
Sbjct: 369 ITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYER 408
>sp|O74365|SOL1_SCHPO SWI/SNF chromatin-remodeling complex subunit sol1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sol1 PE=1 SV=1
Length = 865
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 140 GEADEGTPEEQA---EFMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEV 195
G A++ TP A +FM + SF + K P+ P+N + L+ V+R GG
Sbjct: 178 GNANQLTPAYAASFDKFMVSLISFMEKRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQ 237
Query: 196 VTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK 235
V+A W ++ S P +S + +Y LL YE+
Sbjct: 238 VSAHNFWPKISASLGFPSP-DAISLLIQ-YYNSYLLPYEE 275
>sp|E2R9X2|ARI5B_CANFA AT-rich interactive domain-containing protein 5B OS=Canis
familiaris GN=ARID5B PE=3 SV=1
Length = 1187
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 137 IEMGEADEGTPEEQAEFMKEIESFYRENALEFKPPKFYG-EPLNCLKLWRAVVRLGGYEV 195
+ +GE E +EQA F+ + + +E + + G + +N +++A +LGGYE
Sbjct: 312 VAIGE--ECRADEQA-FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYET 368
Query: 196 VTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEK 235
+TA + W+ + + T+ + R YE+ +L YE+
Sbjct: 369 ITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYER 408
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
++ +I F+ K P + L+ L + V+ GGYE + + W +V + H P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYP 144
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
+ R YE+ + YE + + +Q F
Sbjct: 145 PG-KNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHPF 181
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
++ +I F+ K P + L+ L + V+ GGYE + + W +V + H P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYP 144
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
+ R YE+ + YE + + +Q F
Sbjct: 145 PG-KNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHPF 181
>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila melanogaster GN=osa PE=1
SV=1
Length = 2716
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 171 PKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKAL 230
P +PL+ +L+ V GG+ VT SK W+ + ++ ++T R Y K L
Sbjct: 1025 PTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLG-IGASSSAAYTLRKHYTKNL 1083
Query: 231 LEYEKH 236
L +E H
Sbjct: 1084 LTFECH 1089
>sp|Q9P7W8|RSC9_SCHPO Chromatin structure-remodeling complex subunit rsc9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc9 PE=1 SV=1
Length = 780
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 142 ADEGTPEEQAEFMKEIESFYRENALEFKP-PKFYGEPLNCLKLWRAVVRLGGYEVVTASK 200
+++ E F+ IESF +E + PK +P+ +L++ V++ GGY+ V+A++
Sbjct: 15 SNKSLTNENDSFLSLIESFSQERGVPIDINPKIGRKPILLYELYKKVIKRGGYDAVSATE 74
Query: 201 L-WRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKH 236
W + E F+ + +++ K L+ +E H
Sbjct: 75 DGWTNIAEEFNQSDPARSAGILQNVYF-KYLISWEIH 110
>sp|Q7N3M0|NUDL_PHOLL Uncharacterized Nudix hydrolase NudL OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=nudL PE=3 SV=1
Length = 187
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 272 RRDAAARAMQGWHAQRLLGHGEVAEPIIKDKSLPSPARREKQLKNIGLPKNRTLDSAEKA 331
RR A R+ HA ++ G VA+P KDKS+ + A RE + + + +P + + A
Sbjct: 47 RRSATLRS----HAGQVAFPGGVADP--KDKSIIATALREAE-EEVNIPHQKVQVLGQLA 99
Query: 332 ALTEADKQIITEIVDVGPPADWVKINVREAKDCYEV 367
L + ++T IV + PP + N E +EV
Sbjct: 100 PLNSSGGYLVTPIVGLLPPGLSLHSNPAEVAKIFEV 135
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESF-HP 211
++ +I F+ K P L+ L + VV GGYE + + W +V + +P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYETICKDRRWARVAQRLNYP 144
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
P + R YE+ + YE ++ + +Q F
Sbjct: 145 PG--KNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPF 181
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESF-HP 211
++ +I F+ K P L+ L + VV GGYE + + W +V + +P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYP 144
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
P + R YE+ + YE ++ + +Q F
Sbjct: 145 PG--KNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPF 181
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESF-HP 211
++ +I F+ K P L+ L + VV GGYE + + W +V + +P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYP 144
Query: 212 PKTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSF 250
P + R YE+ + YE ++ + +Q F
Sbjct: 145 PG--KNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPF 181
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
F+ +I F+ K P + L+ L R V GG E T + W +V P
Sbjct: 232 FLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYP 291
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFPQPTNAG 257
+ +V T + YE+ L +E + SG++ P PT++G
Sbjct: 292 SS-KSVGATLKAHYERILHPFEVYT--SGKVLGPT-----PTSSG 328
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae
GN=rbr-2 PE=3 SV=2
Length = 1482
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEFK-PPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLW 202
E +E+ F++ + +F R + L+F+ P G ++ +L R V GG E V + W
Sbjct: 123 EAIVKEKHTFIERLVNFNRYSGLQFEFPVDRDGNVVDLYRLHRIVQNFGGCEEVNDEERW 182
Query: 203 RQVGESFHPPKTCT 216
R V + P + T
Sbjct: 183 RDVAREYLPKEQMT 196
>sp|O14368|HSP16_SCHPO Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hsp16 PE=2 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 356 INVREAKDCYEVYALVPGLLREEVRVQSDPAGRLVITG--------EPEQVDNPWG---I 404
I+V E KD V +PG+ +E+V+V D +G+L I+G E + + W
Sbjct: 39 IDVHEGKDTVSVDVELPGVKKEDVQVHYD-SGKLTISGEVVNERKNESTEGNQRWSERRF 97
Query: 405 TPFKKVVILPSRID 418
F + + +P++ID
Sbjct: 98 GSFSRTITIPAKID 111
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
++ +I F+ K P L+ L + V+ GGYE + + W +V + + P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVMEEGGYEAICKDRRWARVAQRLNYP 144
Query: 213 KTCTTVSWTFRIFYEKALLEYEKHKRLSGELQLPASSFP 251
+ R YE+ + YE + SG + +++P
Sbjct: 145 AG-KNIGSLLRSHYERIIYPYEMFQ--SGANLVQCNTYP 180
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWR 203
E + +F+ ++ F+ K P + L+ L + V GG+E+VT K W
Sbjct: 81 EAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEIVTKEKKWS 140
Query: 204 QVGE--SFHPPKTCTTVSWTFRIFYEKALLEYE 234
+VG + P K ++ + YE+ L YE
Sbjct: 141 KVGSRLGYLPGKGTGSL---LKSHYERILYPYE 170
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 153 FMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWRQVGESFHPP 212
++ +I F+ K P + L+ L + V+ GGYE + + W +V + + P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVMEEGGYEAICKDRRWARVAQRLNYP 144
Query: 213 KTCTTVSWTFRIFYEKALLEYE 234
+ R YE+ + YE
Sbjct: 145 SG-KNIGSLLRSHYERIIYPYE 165
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 144 EGTPEEQAEFMKEIESFYRENALEFKPPKFYGEPLNCLKLWRAVVRLGGYEVVTASKLWR 203
E + +F+ ++ F+ K P + L+ L + V GG+E+VT K W
Sbjct: 81 EAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKEKKWS 140
Query: 204 QVGE--SFHPPKTCTTVSWTFRIFYEKALLEYE 234
+VG + P K ++ + YE+ L YE
Sbjct: 141 KVGSRLGYLPGKGTGSL---LKSHYERILYPYE 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,688,849
Number of Sequences: 539616
Number of extensions: 8011899
Number of successful extensions: 22299
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 21862
Number of HSP's gapped (non-prelim): 605
length of query: 456
length of database: 191,569,459
effective HSP length: 121
effective length of query: 335
effective length of database: 126,275,923
effective search space: 42302434205
effective search space used: 42302434205
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)