Your job contains 1 sequence.
>012821
MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNN
SNYKNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA
AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS
MPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL
FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL
KGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGC
DGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASS
LPTGFVAGAVILVMGLLIYSWTPTASPSSACSSSAN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012821
(456 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150250 - symbol:CLT1 "CRT (chloroquine-resist... 1005 9.5e-120 2
TAIR|locus:2177008 - symbol:CLT3 "CRT (chloroquine-resist... 1163 4.2e-118 1
TAIR|locus:2136032 - symbol:CLT2 "CRT (chloroquine-resist... 928 3.4e-93 1
DICTYBASE|DDB_G0270204 - symbol:crtp3 "chloroquine resist... 204 2.4e-20 2
DICTYBASE|DDB_G0277321 - symbol:crtp2 "chloroquine resist... 192 2.6e-19 2
DICTYBASE|DDB_G0276943 - symbol:crtp1 "chloroquine resist... 213 1.3e-14 1
>TAIR|locus:2150250 [details] [associations]
symbol:CLT1 "CRT (chloroquine-resistance
transporter)-like transporter 1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0002229
"defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IMP] EMBL:CP002688
GO:GO:0009536 GO:GO:0046686 GO:GO:0002229 GO:GO:0034635
IPI:IPI00938852 RefSeq:NP_001154721.1 UniGene:At.31299 PRIDE:F4K139
EnsemblPlants:AT5G19380.2 GeneID:832058 KEGG:ath:AT5G19380
OMA:GRRYRIN Uniprot:F4K139
Length = 507
Score = 1005 (358.8 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 195/284 (68%), Positives = 227/284 (79%)
Query: 157 YVAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILS 216
YVAVYFSILY RY AGIVT EMLS+PK PF+ LSG S +LS
Sbjct: 205 YVAVYFSILYFRYRAGIVTKEMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLS 264
Query: 217 QTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276
QTFLVWQIL SIIFLGRRYR+NQ+ GC LV GVI++VASGS HS K GI WSLLM+
Sbjct: 265 QTFLVWQILFSIIFLGRRYRINQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMV 324
Query: 277 VSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIP 335
SFLLQ ADTV+KEVIFLD+ +RLKG +DLFVVNSYGS FQ + I LLLPFLSKLWGIP
Sbjct: 325 FSFLLQGADTVMKEVIFLDSKKRLKGASLDLFVVNSYGSIFQVICIALLLPFLSKLWGIP 384
Query: 336 FSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSL 395
F+QLP Y+RDG ACFLN+G+ +GC+GAPLLP++FV++NM +NISLL L+KISSA+VSSL
Sbjct: 385 FNQLPSYIRDGGACFLNIGSRITGCEGAPLLPVMFVMMNMAYNISLLRLIKISSAVVSSL 444
Query: 396 ASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIY 439
AST SVPI+VY FTLPLPYLGVAS+LP GFVAG +ILV+G+L+Y
Sbjct: 445 ASTVSVPIAVYCFTLPLPYLGVASTLPRGFVAGTIILVVGMLLY 488
Score = 194 (73.4 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY 157
+ ++ +DR +EIVIAAA T LGVGNRVLYKLAL+PLK YPFFLAQL+TFG+
Sbjct: 93 HAVAGKDDRTMEIVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGF 145
>TAIR|locus:2177008 [details] [associations]
symbol:CLT3 "CRT (chloroquine-resistance
transporter)-like transporter 3" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0002229
"defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IMP] EMBL:CP002688
GO:GO:0009536 GO:GO:0046686 GO:GO:0002229 OMA:EYPFFLA GO:GO:0034635
EMBL:AY093019 EMBL:AY128939 EMBL:AK176437 IPI:IPI00533991
RefSeq:NP_001078575.1 UniGene:At.51404 EnsemblPlants:AT5G12170.2
GeneID:831090 KEGG:ath:AT5G12170 TAIR:At5g12170 PhylomeDB:Q8RWL5
ProtClustDB:CLSN2689790 Genevestigator:Q8RWL5 Uniprot:Q8RWL5
Length = 452
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 244/440 (55%), Positives = 305/440 (69%)
Query: 1 MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFXXXXXXXXXXX 60
M + R T G AS + ++S + +S +R +H + RLP L+
Sbjct: 1 MATTSRRFTTGLFASITSVKSHSANRPQSISL-IRRNHIDHRLP--LIVPSSRRWIIQAA 57
Query: 61 XXXXXXXVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA 120
+ + A ++ + A+GD + S TV +VI + + EIVI
Sbjct: 58 RSWDG----FDDGAEAEIKKPGAYGYAIGDN-EIEGSSSSTV--HVIDGEHVKTAEIVIW 110
Query: 121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS 180
AAVT GVGNRV+YKLALVPLK YPFFLAQL+TFGYVAVY++ILY RY AG VTD MLS
Sbjct: 111 AAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTDAMLS 170
Query: 181 MPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL 240
+PK+PF+ LSG S +LSQTFLVWQI SIIFLGRRY VNQ+
Sbjct: 171 VPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYSVNQI 230
Query: 241 FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL 300
GC LV +GVI++VASGS HSL AG+ W LLM++SFLLQ A TVLKEVIF+D+ +RL
Sbjct: 231 LGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDSQRRL 290
Query: 301 KGG-VDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSG 359
KG +DLF+VNSYGSAFQA+ I LLLPFLSKLWGIPF+QL YL+DGA CFLN GT++ G
Sbjct: 291 KGASLDLFIVNSYGSAFQAICIALLLPFLSKLWGIPFNQLGTYLKDGAVCFLNNGTITKG 350
Query: 360 CDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVAS 419
CDGAP LPLLFV++N+G+NI+LL LLKISSA+VS LAST SVPI+V++FT+PLPYLGVAS
Sbjct: 351 CDGAPFLPLLFVIMNIGYNIALLRLLKISSAVVSCLASTVSVPIAVFLFTMPLPYLGVAS 410
Query: 420 SLPTGFVAGAVILVMGLLIY 439
SLP GF+ G +ILV+G+++Y
Sbjct: 411 SLPKGFMGGTIILVLGMILY 430
>TAIR|locus:2136032 [details] [associations]
symbol:CLT2 "CRT (chloroquine-resistance
transporter)-like transporter 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=IDA] [GO:0002229
"defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IMP] GO:GO:0009507
GO:GO:0046686 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0002229
eggNOG:NOG84011 OMA:FQAGASI GO:GO:0034635 EMBL:BT029757
IPI:IPI00546112 RefSeq:NP_001190820.1 RefSeq:NP_194177.2
UniGene:At.32342 PRIDE:A1L4X0 EnsemblPlants:AT4G24460.1
EnsemblPlants:AT4G24460.2 GeneID:828548 KEGG:ath:AT4G24460
TAIR:At4g24460 HOGENOM:HOG000220923 InParanoid:A1L4X0
PhylomeDB:A1L4X0 ProtClustDB:CLSN2918181 Genevestigator:A1L4X0
Uniprot:A1L4X0
Length = 431
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 182/343 (53%), Positives = 236/343 (68%)
Query: 98 GERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY 157
G T E ++ S N IV + V V L V NRVLYKLALVP+K YPFF+AQL TFGY
Sbjct: 79 GASTEESSIPSNRN----LIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGY 134
Query: 158 VAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQ 217
V +YF+ILY R GIVT+EM+ +PK F +L G IPIL+Q
Sbjct: 135 VLIYFTILYTRRRLGIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQ 194
Query: 218 TFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV 277
T+LVWQ+L +++ LGRR+ +NQ+ GC LV +GV++ V+SGS +L G G W +++
Sbjct: 195 TYLVWQLLFALLILGRRFLLNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVA 254
Query: 278 SFLLQAADTVLKEVIFLDAAQRLKG-GVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPF 336
S QA +++KE +F DAA+RL+G +D+FVVNS+GS FQALF+ LLLPFLS L GIPF
Sbjct: 255 SAAFQAGASIIKEFVFNDAAKRLEGKSLDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPF 314
Query: 337 SQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLA 396
+ LP YL+DGA CF N G SGCDGAP+LPLL++ N+ FNISLLHL+KISSAIVSSL
Sbjct: 315 ASLPSYLKDGAGCFFNTGAKISGCDGAPILPLLYISTNLAFNISLLHLVKISSAIVSSLT 374
Query: 397 STFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIY 439
SVP++VY+ + PLPYL SSL + F G ++LV+GLL+Y
Sbjct: 375 MMLSVPLAVYIMSKPLPYLPGGSSLSSNFTMGCIVLVLGLLLY 417
>DICTYBASE|DDB_G0270204 [details] [associations]
symbol:crtp3 "chloroquine resistance transporter-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0270204 GO:GO:0016021 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0030659 eggNOG:NOG84011
ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR009262
InterPro:IPR017258 PANTHER:PTHR14233 Pfam:PF08627 PIRSF:PIRSF037671
RefSeq:XP_646615.1 EnsemblProtists:DDB0232252 GeneID:8617587
KEGG:ddi:DDB_G0270204 InParanoid:Q55C66 OMA:FQAGASI Uniprot:Q55C66
Length = 478
Score = 204 (76.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 66/255 (25%), Positives = 121/255 (47%)
Query: 107 ISKSNDRR-VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYF-SI 164
+ KS + + I+I + ++ GV N VL K ++ +Y FFL+Q+ +GY+ ++ ++
Sbjct: 44 LKKSMTKETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNYGYLPIFLVAM 103
Query: 165 LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQI 224
Y Y V E + P+ FV SG +L+Q + + +
Sbjct: 104 WYKMYCTSDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTM 163
Query: 225 LLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAA 284
+ S IFL RY + QL G ++ GVI+++ S G S G +F++ ++S + A
Sbjct: 164 IASFIFLRERYSLFQLGGAAVILGGVIVSLIP-SLVGGSSGGNILFYNFFYLISVIPGAL 222
Query: 285 DTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPI 341
V K++ F Q + +D++ + + +Q+LF +L P +L I F+++
Sbjct: 223 SNVYKDIAF----QSID--MDVWYLQFWDCLYQSLFGSILFPVNNWLPPPATIKFTEIIP 276
Query: 342 YLRDGAACFLNLGTL 356
+RDGA C T+
Sbjct: 277 SMRDGALCLGGKNTI 291
Score = 105 (42.0 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 348 ACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYV 407
+C +N + C ++ L+++ VN+ +NI +L +LK + A V S+A+T +P++
Sbjct: 306 SCGINDNFVCDDCHNTWIIVLIYMTVNIAYNIFILLVLKHAGATVYSIANTVILPLTNIF 365
Query: 408 FTLPLPYLGVASSLPTGF-VAGAVILVMGL 436
F++ +G A++ + VAG ++++ GL
Sbjct: 366 FSIHF-IMGAATTPFSALSVAGLLLILFGL 394
>DICTYBASE|DDB_G0277321 [details] [associations]
symbol:crtp2 "chloroquine resistance transporter-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0277321 GO:GO:0016021 GenomeReviews:CM000151_GR
GO:GO:0030659 EMBL:AAFI02000019 eggNOG:NOG84011
ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR009262
InterPro:IPR017258 PANTHER:PTHR14233 Pfam:PF08627 PIRSF:PIRSF037671
RefSeq:XP_642710.1 PRIDE:Q550A6 EnsemblProtists:DDB0232251
GeneID:8620902 KEGG:ddi:DDB_G0277321 InParanoid:Q550A6 OMA:ITLNMAF
Uniprot:Q550A6
Length = 484
Score = 192 (72.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 63/256 (24%), Positives = 116/256 (45%)
Query: 105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
N ISK +++ + +L GV N +L K + +Y FFL QL +GYV ++ +I
Sbjct: 51 NSISKQT---ATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFLNQLTNYGYVPIFGAI 107
Query: 165 -LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
LY + + S P+ FV +G +L+Q+ + +
Sbjct: 108 VLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFT 167
Query: 224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
+LLS IFL RY + QL G ++ GV++++ G++ G +F++ ++S + A
Sbjct: 168 MLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNT-SGNMLFYNFFYLISMIPYA 226
Query: 284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLP 340
V K + F +D++ + + + +Q+L +L P +L + F+Q+
Sbjct: 227 FSNVYKAIGFSTVED-----MDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVI 281
Query: 341 IYLRDGAACFLNLGTL 356
L+ G C + TL
Sbjct: 282 PQLKAGGKCLGGINTL 297
Score = 109 (43.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 352 NLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLP 411
NLG C GA ++ L+++ VN+ +N+ +L +LK + A V S+A+T +P++ F+
Sbjct: 318 NLGC--DNCHGAWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFK 375
Query: 412 LPYLGVASSLPTGF-VAGAVILVMGL 436
+G S+ +G VAG I+++GL
Sbjct: 376 F-IMGSDSNPFSGLSVAGLCIILLGL 400
>DICTYBASE|DDB_G0276943 [details] [associations]
symbol:crtp1 "chloroquine resistance transporter-like
protein" species:44689 "Dictyostelium discoideum" [GO:0012506
"vesicle membrane" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0276943 Pfam:PF03151 GO:GO:0016021
GenomeReviews:CM000151_GR GO:GO:0030659 GO:GO:0012506
EMBL:AAFI02000019 EMBL:AF317500 RefSeq:XP_642959.1 PRIDE:Q9GSB0
EnsemblProtists:DDB0185065 GeneID:8620828 KEGG:ddi:DDB_G0276943
eggNOG:NOG84011 InParanoid:Q9GSB0 OMA:EYPFFLA
ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR004853
InterPro:IPR009262 InterPro:IPR017258 PANTHER:PTHR14233
Pfam:PF08627 PIRSF:PIRSF037671 Uniprot:Q9GSB0
Length = 473
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 66/256 (25%), Positives = 114/256 (44%)
Query: 105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
N +SK + I+I + V GV N VL K + +Y FFL+QL FGYV ++ ++
Sbjct: 43 NSMSKET---ITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGAV 99
Query: 165 L-YLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
Y + + E P F SG +L+Q + +
Sbjct: 100 TAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFT 159
Query: 224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
++ S IFL RY + QL G ++ IG ++T S G S G FW+ ++S + A
Sbjct: 160 MIASFIFLKERYSLIQLGGALVI-IGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPGA 218
Query: 284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLP 340
V K++ F A +D++ + + S +Q++F L P +L + F Q+
Sbjct: 219 LSNVYKDIGFQAVAD-----MDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQIL 273
Query: 341 IYLRDGAACFLNLGTL 356
++++GA C + ++
Sbjct: 274 PFMKEGAECLAGINSI 289
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 44/146 (30%), Positives = 80/146 (54%)
Query: 303 GVDLFVVNSYGSAFQALFICLLLPFLSK----LWGIPFSQLPIYLRD-----GAAC-FLN 352
G+ LF VN++ + +LPF+ + L GI S +P Y+ +C +
Sbjct: 251 GLFLFPVNNWLPPPATVKFEQILPFMKEGAECLAGIN-SIIPSYINGTSSFTATSCTYAP 309
Query: 353 LGTLS-SGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLP 411
T++ C A ++ +L++ +N+ +NI +L +LK + A V S+A+T +P++ VF++
Sbjct: 310 DATITCDDCHNAWIVIILYMTINIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVFSIH 369
Query: 412 LPYLGVASSLPTGF-VAGAVILVMGL 436
+G A S +G VAG VI+++GL
Sbjct: 370 F-IMGSAVSPFSGLSVAGLVIILVGL 394
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.141 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 456 404 0.00099 117 3 11 22 0.44 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 607 (65 KB)
Total size of DFA: 212 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.26u 0.08s 31.34t Elapsed: 00:00:02
Total cpu time: 31.27u 0.08s 31.35t Elapsed: 00:00:02
Start: Sat May 11 15:24:19 2013 End: Sat May 11 15:24:21 2013