BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012821
(456 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GSB0|CRTP1_DICDI Crt homolog 1 OS=Dictyostelium discoideum GN=crtp1 PE=2 SV=1
Length = 473
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 169/354 (47%), Gaps = 37/354 (10%)
Query: 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSIL-YLRYHA 171
+ I+I + V GV N VL K + +Y FFL+QL FGYV ++ ++ Y +
Sbjct: 48 ETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGAVTAYKIFFT 107
Query: 172 GIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFL 231
+ E P F +G L+A+ + G SG +L+Q + + ++ S IFL
Sbjct: 108 KDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFL 167
Query: 232 GRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEV 291
RY + QL G LV IG ++T S G S G FW+ ++S + A V K++
Sbjct: 168 KERYSLIQLGGA-LVIIGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPGALSNVYKDI 226
Query: 292 IFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPIYLRDGAA 348
F A +D++ + + S +Q++F L P +L + F Q+ ++++GA
Sbjct: 227 GFQAVAD-----MDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQILPFMKEGAE 281
Query: 349 CFLNLGTL-------------------------SSGCDGAPLLPLLFVLVNMGFNISLLH 383
C + ++ C A ++ +L++ +N+ +NI +L
Sbjct: 282 CLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIILYMTINIIYNIFILL 341
Query: 384 LLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF-VAGAVILVMGL 436
+LK + A V S+A+T +P++ VF++ +G A S +G VAG VI+++GL
Sbjct: 342 VLKHAGATVYSIANTLRLPLTNIVFSIHF-IMGSAVSPFSGLSVAGLVIILVGL 394
>sp|Q55C66|CRTP3_DICDI Crt homolog 3 OS=Dictyostelium discoideum GN=crtp3 PE=3 SV=1
Length = 478
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 160/325 (49%), Gaps = 34/325 (10%)
Query: 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYF-SILYLRYHA 171
+ I+I + ++ GV N VL K ++ +Y FFL+Q+ +GY+ ++ ++ Y Y
Sbjct: 51 ETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNYGYLPIFLVAMWYKMYCT 110
Query: 172 GIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFL 231
V E + P+ FV +GLL+A+ + G SG +L+Q + + ++ S IFL
Sbjct: 111 SDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFL 170
Query: 232 GRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEV 291
RY + QL G ++ GVI+++ S G S G +F++ ++S + A V K++
Sbjct: 171 RERYSLFQLGGAAVILGGVIVSLIP-SLVGGSSGGNILFYNFFYLISVIPGALSNVYKDI 229
Query: 292 IFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP---FLSKLWGIPFSQLPIYLRDGAA 348
F Q + +D++ + + +Q+LF +L P +L I F+++ +RDGA
Sbjct: 230 AF----QSID--MDVWYLQFWDCLYQSLFGSILFPVNNWLPPPATIKFTEIIPSMRDGAL 283
Query: 349 CF-----------------------LNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLL 385
C +N + C ++ L+++ VN+ +NI +L +L
Sbjct: 284 CLGGKNTILPIFNGTTSTLAFGSCGINDNFVCDDCHNTWIIVLIYMTVNIAYNIFILLVL 343
Query: 386 KISSAIVSSLASTFSVPISVYVFTL 410
K + A V S+A+T +P++ F++
Sbjct: 344 KHAGATVYSIANTVILPLTNIFFSI 368
>sp|Q550A6|CRTP2_DICDI Crt homolog 2 OS=Dictyostelium discoideum GN=crtp2 PE=3 SV=1
Length = 484
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 184/375 (49%), Gaps = 40/375 (10%)
Query: 92 VDKRKSGERTVEF--NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFL 149
V K+ +R ++ N ISK + +++ + +L GV N +L K + +Y FFL
Sbjct: 36 VKKQSIIQRFKDYLKNSISK---QTATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFL 92
Query: 150 AQLATFGYVAVYFSI-LYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208
QL +GYV ++ +I LY + + S P+ FV +G L+A+ + G +
Sbjct: 93 NQLTNYGYVPIFGAIVLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTT 152
Query: 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAG 268
G +L+Q+ + + +LLS IFL RY + QL G ++ GV++++ G++ G
Sbjct: 153 GPLQQLLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNT-SGNM 211
Query: 269 IFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLP-- 326
+F++ ++S + A V K + F +D++ + + + +Q+L +L P
Sbjct: 212 LFYNFFYLISMIPYAFSNVYKAIGFSTVED-----MDVWYLQYFDALYQSLVGTVLFPIN 266
Query: 327 -FLSKLWGIPFSQLPIYLRDGAACFLNLGTL--------------------SSGCD---G 362
+L + F+Q+ L+ G C + TL + GCD G
Sbjct: 267 NWLPPPSDMKFNQVIPQLKAGGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHG 326
Query: 363 APLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLP 422
A ++ L+++ VN+ +N+ +L +LK + A V S+A+T +P++ F+ +G S+
Sbjct: 327 AWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFKF-IMGSDSNPF 385
Query: 423 TGF-VAGAVILVMGL 436
+G VAG I+++GL
Sbjct: 386 SGLSVAGLCIILLGL 400
>sp|Q9GSD8|CRT_PLABE Putative chloroquine resistance transporter OS=Plasmodium berghei
GN=CG10 PE=2 SV=1
Length = 425
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 39/334 (11%)
Query: 95 RKSGERTVE--FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL 152
SG V+ F +I V + + + + + + V N+V K L + +Y F ++
Sbjct: 35 NNSGRSCVKRFFKIIGNEMKNNVYVYLLSILYLCVCVMNKVFAKRTLNKMGNYSFVTSET 94
Query: 153 ATFGYVAVYFSILYLRYH----AGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208
+ V F +LY Y + + +E F + LL+A M +
Sbjct: 95 HNIICIIV-FQLLYFIYRKTSSSSVYKNESQKNFGWQFFLISLLDASTVIISMIGLTRTT 153
Query: 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIITVASGSNPGHSLKG 266
G + Q + + +FLG RY + G F L+ I V+ T S G +
Sbjct: 154 GNIQSFIMQLIIPVNMYFWFMFLGYRYHLFNYLGAFIILITIAVVETFLSFETQGEN--- 210
Query: 267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-- 324
I ++L+MI +F + + +EV+F K +++ +N+ FQ F LL
Sbjct: 211 -SIIFNLIMISAFNTLSFSNMTREVVF------KKHKINILRLNAMVVLFQ-FFTSLLVL 262
Query: 325 ----LPFLSKLWGIPFSQLPIYLRDGAACFL--------NLGT----LSSGCDGAPLLPL 368
+PFL +++ +PFS++ + +G C N G + C+GA +
Sbjct: 263 PVYNIPFLKEIY-MPFSEMSTNINNGLRCLFYGENTIVENCGVGMVKMCDNCEGAWKTFI 321
Query: 369 LFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
F N+ N+ +++ S + ++ S P
Sbjct: 322 TFSFFNICDNLLACYIIDKFSTMTYTIVSCIQGP 355
>sp|Q7REK3|CRT_PLAYO Putative chloroquine resistance transporter OS=Plasmodium yoelii
yoelii GN=PY05061 PE=3 SV=1
Length = 424
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 45/347 (12%)
Query: 81 SDGHEAAVGDLVDKRKSGERTVE--FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLA 138
++G E +GD SG ++ F +I V + + + + + V N+V K
Sbjct: 28 TNGSE--IGD-----NSGRSCIKRFFKIIGNEMKNNVYVYFLSILYLCVCVMNKVFAKRT 80
Query: 139 LVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVT---DEMLSMPKAPFVAVGLLEAL 195
L + +Y F ++ + V F +LY Y + +E F + LL+A
Sbjct: 81 LNKMGNYSFVTSETHNIICIVV-FQLLYFIYRKTSTSGYKNESQKNFGWQFFLISLLDAS 139
Query: 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIIT 253
M +G + Q + + +FLG RY + G F L+ I V+ T
Sbjct: 140 TVIISMIGLTRTTGNIQSFIMQLIIPVNMYFCFMFLGYRYHLFNYLGAFIILITIAVVET 199
Query: 254 VASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYG 313
S + I ++L+MI + + + + +EV+F K +++ +N+
Sbjct: 200 FLSFETQSEN----SIIFNLIMISALIPLSFSNMTREVVF------KKHKINILRLNAMV 249
Query: 314 SAFQALFICLL------LPFLSKLWGIPFSQLPIYLRDGAACFL--------NLGT---- 355
FQ F LL +PFL +++ +PFS++ + +G C N G
Sbjct: 250 VLFQ-FFTSLLVLPVYNIPFLKEIY-MPFSEMSTNINNGLRCLFYGQNTVVENCGVGMVK 307
Query: 356 LSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
+ C+GA + F N+ N+ +++ S + ++ S P
Sbjct: 308 MCDNCEGAWKTFITFSFFNICDNLLACYIIDKFSTMTYTIVSCIQGP 354
>sp|Q9N623|CRT_PLAFA Chloroquine resistance transporter OS=Plasmodium falciparum GN=CRT
PE=1 SV=1
Length = 424
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 44/325 (13%)
Query: 104 FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFS 163
F +I K + I I + + + + V N++ K L + +Y F ++ F + ++F
Sbjct: 48 FKLIFKEIKDNIFIYILSIIYLSVCVMNKIFAKRTLNKIGNYSFVTSETHNFICMIMFFI 107
Query: 164 ILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA---------LAAATGMAAGAILSGASIPI 214
+ L + + E F A+ +L+A L TG +L SIPI
Sbjct: 108 VYSLFGNKKGNSKERHRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQ-LSIPI 166
Query: 215 LSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274
+ + L RY + G V I V I + + + I ++L+
Sbjct: 167 --------NMFFCFLILRYRYHLYNYLGA--VIIVVTIALVEMKLSFETQEENSIIFNLV 216
Query: 275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-----LPFLS 329
+I + + + +E++F K +D+ +N+ S FQ CL+ LPFL
Sbjct: 217 LISALIPVCFSNMTREIVF------KKYKIDILRLNAMVSFFQLFTSCLILPVYTLPFLK 270
Query: 330 KLWGIPFSQLPIYLRDGAACF------------LNLGTLSSGCDGAPLLPLLFVLVNMGF 377
+L +P++++ +++G AC L + L CDGA LF N+
Sbjct: 271 QL-HLPYNEIWTNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGAWKTFALFSFFNICD 329
Query: 378 NISLLHLLKISSAIVSSLASTFSVP 402
N+ +++ S + ++ S P
Sbjct: 330 NLITSYIIDKFSTMTYTIVSCIQGP 354
>sp|Q8IBZ9|CRT_PLAF7 Putative chloroquine resistance transporter OS=Plasmodium
falciparum (isolate 3D7) GN=CG10 PE=3 SV=1
Length = 424
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 44/325 (13%)
Query: 104 FNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFS 163
F +I K + I I + + + + V N++ K L + +Y F ++ F + ++F
Sbjct: 48 FKLIFKEIKDNIFIYILSIIYLSVCVMNKIFAKRTLNKIGNYSFVTSETHNFICMIMFFI 107
Query: 164 ILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA---------LAAATGMAAGAILSGASIPI 214
+ L + + E F A+ +L+A L TG +L SIPI
Sbjct: 108 VYSLFGNKKGNSKERHRSFNLQFFAISMLDACSVILAFIGLTRTTGNIQSFVLQ-LSIPI 166
Query: 215 LSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274
+ + L RY + G V I V I + + + I ++L+
Sbjct: 167 --------NMFFCFLILRYRYHLYNYLGA--VIIVVTIALVEMKLSFETQEENSIIFNLV 216
Query: 275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-----LPFLS 329
+I + + + +E++F K +D+ +N+ S FQ CL+ LPFL
Sbjct: 217 LISALIPVCFSNMTREIVF------KKYKIDILRLNAMVSFFQLFTSCLILPVYTLPFLK 270
Query: 330 KLWGIPFSQLPIYLRDGAACF------------LNLGTLSSGCDGAPLLPLLFVLVNMGF 377
+L +P++++ +++G AC L + L CDGA LF N+
Sbjct: 271 QL-HLPYNEIWTNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGAWKTFALFSFFNICD 329
Query: 378 NISLLHLLKISSAIVSSLASTFSVP 402
N+ +++ S + ++ S P
Sbjct: 330 NLITSYIIDKFSTMTYTIVSCIQGP 354
>sp|Q9GSD3|CRT_PLAVS Putative chloroquine resistance transporter OS=Plasmodium vivax
(strain Salvador I) GN=CG10 PE=3 SV=1
Length = 424
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 15/257 (5%)
Query: 111 NDRRVEIVIAAAVTVLLGVG--NRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLR 168
N+ R I I + V L V N++L K L + +Y F ++ + V+F++ ++
Sbjct: 52 NEIRENISIYLLIIVYLCVCVMNKLLAKRTLKKIGNYSFVTSETHNCICMVVFFALYFMF 111
Query: 169 YHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSI 228
+ E F+ + LL+A + +G + Q + +
Sbjct: 112 GRRVMSAKERHRNFGVQFLLISLLDACSVIIAFIGLTRTTGNIQSFVMQLSIPINMFFCF 171
Query: 229 IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL 288
+ L RY + G F+ I V I V + + I ++L++I S + + +
Sbjct: 172 LILRYRYHLFNYVGAFI--IVVTIAVVEFMLSFETQEENSIVFNLVLIASLIPLSFSNMT 229
Query: 289 KEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLS----KLWGIPFSQLPIYLR 344
+E++F K +++ +N+ S FQ CL+LP + K +PFS++ ++
Sbjct: 230 REIVF------KKYKINILRLNAVVSFFQIFTSCLMLPMYTLPFLKQINLPFSEIGTNIK 283
Query: 345 DGAAC-FLNLGTLSSGC 360
+G C FL T+ C
Sbjct: 284 NGFRCLFLGQNTIVENC 300
>sp|Q7Z0V9|CRT_PLACH Putative chloroquine resistance transporter OS=Plasmodium chabaudi
GN=CG10 PE=3 SV=1
Length = 424
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 139/341 (40%), Gaps = 37/341 (10%)
Query: 84 HEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLK 143
+++ +G+ + R G + + +I + + + + + + + V N+V K L +
Sbjct: 29 NDSEIGN--NSRWGGAKRI-CKLIGNEMRNNIYVYLLSILYLCVSVMNKVFSKRTLNKIG 85
Query: 144 HYPFFLAQLATFGYVAVYFSILYLRYHAG---IVTDEMLSMPKAPFVAVGLLEALAAATG 200
+Y F +++ + F +LY Y +E F + LL+A
Sbjct: 86 NYSFVTSEVHNM-ICTIVFQLLYFIYRKTSNPASRNESQKNFGWQFFLISLLDASTVIIT 144
Query: 201 MAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCF--LVGIGVIITVASGS 258
M +G + Q + + IFLG RY + G F L+ I + TV S
Sbjct: 145 MIGLTRTTGNIQSFIMQLIIPVNMYFCFIFLGYRYHLFNYLGAFIILITIAAVETVLSYE 204
Query: 259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQA 318
+ I ++L+MI + + + + +EV+F K +++ +N+ + FQ
Sbjct: 205 TQSDN----SIIFNLIMIFALIPLSFSNMTREVVF------KKHKINIIRLNAMVALFQF 254
Query: 319 LFICLLLP-----FLSKLWGIPFSQLPIYLRDGAACFL--------NLGT----LSSGCD 361
L+LP FL +++ +PFS++ + DG C N G + C+
Sbjct: 255 FTSLLVLPVYNISFLKEIY-MPFSEMGTNINDGLRCLFYGQSTIVENCGVGMVKMCDQCE 313
Query: 362 GAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVP 402
GA + + N+ N+ + +++ S + ++ S P
Sbjct: 314 GAWKTFITYSFFNICDNLLVCYIIDKFSTMTYTIVSCIQGP 354
>sp|Q9GSD7|CRT_PLAKN Putative chloroquine resistance transporter OS=Plasmodium knowlesi
GN=CG10 PE=2 SV=1
Length = 424
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 123/311 (39%), Gaps = 49/311 (15%)
Query: 82 DGHEAAVGDLVDKRKSGERTVEF-NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV 140
D H ++ D+ + + + ++ + I + + + + V N+++ K L
Sbjct: 24 DSHAPNENEIADEAPMSRKILYYLKLVYHEIRENITIYLLIILYLCVCVMNKIMAKRTLK 83
Query: 141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA------ 194
+ +Y F ++ + V+FS+ ++ E F+ + LL+A
Sbjct: 84 KIGNYSFVTSETHNTICMVVFFSLYFIFGRRVTSAKERHQNFGLQFLLISLLDACSVIIA 143
Query: 195 ---LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251
L TG ++ SIPI F + IL RYR LF VG +I
Sbjct: 144 FIGLTRTTGNIQSFVMQ-LSIPI--NMFFCFLIL--------RYRY-HLFN--YVGASII 189
Query: 252 ---ITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFV 308
I + + + I ++L++I S + + + +E++F K +++
Sbjct: 190 VLTIAIVEFILSFETQEENSIVFNLVLIASLIPMSFSNMTREIVF------KKYKINILR 243
Query: 309 VNSYGSAFQALFICLLLPFLS----KLWGIPFSQLPIYLRDGAACF------------LN 352
+N+ S FQ CL+LP + K +PFS++ +++G C L
Sbjct: 244 LNAVVSFFQIFTSCLMLPMYTLPFLKQINLPFSEIGTNIKNGFRCLILGQNTIVENCGLG 303
Query: 353 LGTLSSGCDGA 363
+ + C+GA
Sbjct: 304 MAKMCDDCEGA 314
>sp|P0ABT8|YIJE_ECOLI Uncharacterized inner membrane transporter yiJE OS=Escherichia coli
(strain K12) GN=yijE PE=1 SV=1
Length = 301
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 181 MPKAPF---VAVGLLEALAAATGMAAGAILSGAS--IPILSQTFLVWQILLSIIFLGRRY 235
M PF +A+ LL+ G+A A++SG + + ILS T W ++ + +FLG R
Sbjct: 64 MRPTPFKYTLAIALLQT-CGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERL 122
Query: 236 RVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLD 295
R Q F + G+ + + S+K A +L I+S + A ++ + ++
Sbjct: 123 RRGQYFAILIAAFGLFLVLQPWQLDFSSMKSA-----MLAILSGVSWGASAIVAKRLYAR 177
Query: 296 AAQRLKGGVDLFVVNSYGSAFQAL---FICLLLP 326
+ VDL + S+ + AL + LL+P
Sbjct: 178 HPR-----VDLLSLTSWQMLYAALVMSVVALLVP 206
>sp|P0ABT9|YIJE_ECOL6 Uncharacterized inner membrane transporter yiJE OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yijE PE=3
SV=1
Length = 301
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 181 MPKAPF---VAVGLLEALAAATGMAAGAILSGAS--IPILSQTFLVWQILLSIIFLGRRY 235
M PF +A+ LL+ G+A A++SG + + ILS T W ++ + +FLG R
Sbjct: 64 MRPTPFKYTLAIALLQT-CGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERL 122
Query: 236 RVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLD 295
R Q F + G+ + + S+K A +L I+S + A ++ + ++
Sbjct: 123 RRGQYFAILIAAFGLFLVLQPWQLDFSSMKSA-----MLAILSGVSWGASAIVAKRLYAR 177
Query: 296 AAQRLKGGVDLFVVNSYGSAFQAL---FICLLLP 326
+ VDL + S+ + AL + LL+P
Sbjct: 178 HPR-----VDLLSLTSWQMLYAALVMSVVALLVP 206
>sp|Q8C261|NCKX5_MOUSE Sodium/potassium/calcium exchanger 5 OS=Mus musculus GN=Slc24a5
PE=2 SV=1
Length = 501
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 136 KLALVPLKHYP--FFLAQLATFGYVAVYF-SILYLRYHAGIVTDEMLSMPKAPFV--AVG 190
+ A+ P +P FF Q +T G + +YF ILY+ IV D+ +P + ++G
Sbjct: 45 QCAVSPASEFPEGFFTKQESTDGGIVIYFLIILYMCMAISIVCDKYF-LPSLEIISDSLG 103
Query: 191 LLEALAAATGMAAGAILSGASIPILSQTFL 220
L + +A AT MAA G+S P L FL
Sbjct: 104 LSQDVAGATFMAA-----GSSAPELVTAFL 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,521,758
Number of Sequences: 539616
Number of extensions: 6529392
Number of successful extensions: 39772
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 39701
Number of HSP's gapped (non-prelim): 109
length of query: 456
length of database: 191,569,459
effective HSP length: 121
effective length of query: 335
effective length of database: 126,275,923
effective search space: 42302434205
effective search space used: 42302434205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)