Query 012821
Match_columns 456
No_of_seqs 166 out of 301
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 06:39:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012821.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012821hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3912 Predicted integral mem 100.0 3.1E-50 6.8E-55 389.4 20.9 308 118-440 5-333 (372)
2 PF06027 DUF914: Eukaryotic pr 100.0 1.1E-33 2.3E-38 287.4 23.1 285 128-448 26-312 (334)
3 PF08449 UAA: UAA transporter 99.9 7.8E-25 1.7E-29 219.8 25.2 289 126-447 10-303 (303)
4 PF04142 Nuc_sug_transp: Nucle 99.9 1.4E-23 3E-28 205.6 17.5 216 184-431 18-243 (244)
5 KOG2234 Predicted UDP-galactos 99.9 1.4E-21 3E-26 196.7 23.1 297 115-445 15-326 (345)
6 KOG2766 Predicted membrane pro 99.9 1.1E-23 2.5E-28 202.7 -0.6 272 126-442 28-300 (336)
7 KOG1583 UDP-N-acetylglucosamin 99.8 2.2E-21 4.9E-26 188.7 7.5 291 118-441 4-314 (330)
8 TIGR00817 tpt Tpt phosphate/ph 99.7 6.5E-16 1.4E-20 154.6 23.3 297 116-448 2-300 (302)
9 PTZ00343 triose or hexose phos 99.7 1.3E-15 2.9E-20 156.4 25.4 304 112-442 45-349 (350)
10 PF08627 CRT-like: CRT-like; 99.6 1.5E-15 3.2E-20 132.1 5.2 81 108-188 49-130 (130)
11 KOG1441 Glucose-6-phosphate/ph 99.5 5.6E-13 1.2E-17 134.9 16.5 298 113-447 14-313 (316)
12 KOG1581 UDP-galactose transpor 99.4 6.5E-12 1.4E-16 124.6 18.1 265 141-440 46-312 (327)
13 PLN00411 nodulin MtN21 family 99.4 8E-11 1.7E-15 121.7 23.9 298 113-446 10-333 (358)
14 KOG2765 Predicted membrane pro 99.3 7E-11 1.5E-15 120.1 17.7 237 187-451 163-400 (416)
15 TIGR00803 nst UDP-galactose tr 99.2 8.5E-11 1.8E-15 112.9 12.5 221 186-439 2-222 (222)
16 TIGR00950 2A78 Carboxylate/Ami 99.2 2.7E-09 5.8E-14 103.7 21.7 213 184-437 47-260 (260)
17 KOG1582 UDP-galactose transpor 99.1 1.7E-09 3.6E-14 106.1 16.2 292 112-443 39-334 (367)
18 PRK11272 putative DMT superfam 99.1 6.8E-08 1.5E-12 96.6 26.4 274 120-444 12-288 (292)
19 PRK11453 O-acetylserine/cystei 99.1 9.2E-08 2E-12 96.0 26.4 213 199-444 75-290 (299)
20 COG0697 RhaT Permeases of the 99.0 1.9E-07 4E-12 90.9 26.8 269 126-442 17-288 (292)
21 PRK11689 aromatic amino acid e 99.0 2.7E-07 5.9E-12 92.5 26.6 266 124-442 12-288 (295)
22 PRK15430 putative chlorampheni 98.9 1.4E-07 3.1E-12 94.5 20.6 207 188-441 78-285 (296)
23 TIGR03340 phn_DUF6 phosphonate 98.8 3E-07 6.5E-12 91.4 19.5 213 187-438 67-280 (281)
24 PRK10532 threonine and homoser 98.8 1.2E-05 2.5E-10 80.7 29.3 271 117-445 14-285 (293)
25 KOG1444 Nucleotide-sugar trans 98.7 2.5E-06 5.4E-11 85.9 20.8 292 110-443 6-302 (314)
26 KOG1443 Predicted integral mem 98.6 2.5E-06 5.4E-11 85.4 17.9 291 117-442 17-316 (349)
27 PF03151 TPT: Triose-phosphate 98.6 7.4E-07 1.6E-11 79.9 12.3 152 271-441 1-153 (153)
28 KOG1580 UDP-galactose transpor 98.5 5.1E-07 1.1E-11 87.4 10.6 232 179-440 81-312 (337)
29 TIGR00776 RhaT RhaT L-rhamnose 98.4 0.00026 5.5E-09 71.2 25.6 212 188-439 64-286 (290)
30 PF13536 EmrE: Multidrug resis 98.3 1.1E-06 2.3E-11 76.0 6.9 97 160-257 11-108 (113)
31 TIGR00688 rarD rarD protein. T 98.3 0.00015 3.3E-09 70.8 21.4 96 186-292 73-168 (256)
32 PF00892 EamA: EamA-like trans 98.1 1.4E-05 2.9E-10 68.1 8.8 119 130-253 5-124 (126)
33 KOG1442 GDP-fucose transporter 98.0 1.5E-06 3.3E-11 85.7 1.0 204 199-443 118-329 (347)
34 PF05653 Mg_trans_NIPA: Magnes 98.0 6.5E-05 1.4E-09 76.2 12.4 70 191-260 58-127 (300)
35 COG2510 Predicted membrane pro 97.6 0.00075 1.6E-08 60.1 11.5 132 119-254 6-138 (140)
36 PF03151 TPT: Triose-phosphate 97.4 0.0024 5.2E-08 57.0 12.2 67 186-252 84-150 (153)
37 KOG4510 Permease of the drug/m 97.3 0.00052 1.1E-08 68.0 6.9 132 112-254 35-168 (346)
38 TIGR00950 2A78 Carboxylate/Ami 97.1 0.0093 2E-07 57.8 13.1 65 187-251 195-260 (260)
39 PRK15051 4-amino-4-deoxy-L-ara 96.9 0.0071 1.5E-07 52.5 9.3 63 191-253 45-107 (111)
40 KOG4314 Predicted carbohydrate 96.8 0.0075 1.6E-07 57.6 9.5 218 193-445 63-280 (290)
41 KOG2922 Uncharacterized conser 96.4 0.025 5.3E-07 57.6 10.1 74 187-260 67-141 (335)
42 PF08449 UAA: UAA transporter 96.3 0.031 6.7E-07 56.4 10.8 135 116-252 155-294 (303)
43 TIGR03340 phn_DUF6 phosphonate 96.2 0.015 3.3E-07 57.8 8.0 65 188-252 216-280 (281)
44 PLN00411 nodulin MtN21 family 96.2 0.037 8E-07 57.6 10.9 62 195-256 268-329 (358)
45 PF10639 UPF0546: Uncharacteri 95.7 0.028 6.2E-07 49.2 6.2 70 184-253 42-112 (113)
46 PRK10452 multidrug efflux syst 95.6 0.036 7.8E-07 49.0 6.6 72 184-255 31-103 (120)
47 TIGR00776 RhaT RhaT L-rhamnose 95.4 0.1 2.2E-06 52.5 10.1 71 184-254 212-287 (290)
48 TIGR00803 nst UDP-galactose tr 95.3 0.17 3.8E-06 48.4 11.0 67 186-252 155-221 (222)
49 PTZ00343 triose or hexose phos 95.1 0.25 5.4E-06 51.1 12.1 65 188-252 281-345 (350)
50 PRK10532 threonine and homoser 95.1 0.24 5.3E-06 49.6 11.6 68 188-255 213-281 (293)
51 PRK11689 aromatic amino acid e 94.8 0.3 6.4E-06 49.0 11.4 68 188-255 220-287 (295)
52 TIGR00817 tpt Tpt phosphate/ph 94.6 0.14 3E-06 51.3 8.3 62 193-254 231-292 (302)
53 PRK02971 4-amino-4-deoxy-L-ara 94.5 0.57 1.2E-05 41.9 11.2 66 190-255 55-122 (129)
54 COG0697 RhaT Permeases of the 94.5 0.5 1.1E-05 45.7 11.7 69 186-254 217-286 (292)
55 PRK09541 emrE multidrug efflux 94.4 0.13 2.8E-06 44.8 6.7 65 190-254 37-102 (110)
56 PRK11272 putative DMT superfam 94.3 0.62 1.3E-05 46.6 12.3 61 193-253 223-283 (292)
57 PRK10650 multidrug efflux syst 94.1 0.17 3.7E-06 44.1 6.6 67 186-252 38-105 (109)
58 PF06800 Sugar_transport: Suga 93.9 7.8 0.00017 39.0 19.7 146 141-290 7-158 (269)
59 PRK11453 O-acetylserine/cystei 93.7 1.1 2.3E-05 45.1 12.7 58 198-255 230-287 (299)
60 COG5070 VRG4 Nucleotide-sugar 93.6 0.29 6.4E-06 47.8 8.0 128 120-253 10-138 (309)
61 PRK11431 multidrug efflux syst 93.6 0.23 4.9E-06 42.9 6.5 67 187-253 33-100 (105)
62 PRK15430 putative chlorampheni 93.5 1.3 2.8E-05 44.4 12.9 68 188-255 218-285 (296)
63 COG2076 EmrE Membrane transpor 93.0 0.37 8E-06 41.8 6.9 69 184-252 31-100 (106)
64 PF06800 Sugar_transport: Suga 92.5 0.86 1.9E-05 45.8 9.7 70 183-252 195-268 (269)
65 COG2962 RarD Predicted permeas 91.4 5.4 0.00012 40.5 13.9 77 179-255 66-144 (293)
66 PF00893 Multi_Drug_Res: Small 91.0 0.78 1.7E-05 38.4 6.5 58 189-246 35-93 (93)
67 PF04142 Nuc_sug_transp: Nucle 90.4 5 0.00011 39.6 12.7 129 115-246 114-244 (244)
68 PF00892 EamA: EamA-like trans 89.9 1.1 2.3E-05 37.7 6.5 64 372-440 62-125 (126)
69 PF04657 DUF606: Protein of un 88.9 6.8 0.00015 35.3 11.3 117 125-252 14-138 (138)
70 PF06027 DUF914: Eukaryotic pr 87.0 9.9 0.00021 39.4 12.5 58 199-256 249-306 (334)
71 KOG1441 Glucose-6-phosphate/ph 85.5 1 2.2E-05 46.3 4.4 66 187-252 239-304 (316)
72 KOG2765 Predicted membrane pro 85.3 9.5 0.00021 40.1 11.2 106 149-257 277-392 (416)
73 KOG1580 UDP-galactose transpor 80.7 7.2 0.00016 38.7 7.8 75 183-257 241-315 (337)
74 COG5006 rhtA Threonine/homoser 79.3 3.3 7.2E-05 41.4 5.1 54 198-251 225-278 (292)
75 PRK13499 rhamnose-proton sympo 79.2 87 0.0019 32.8 19.6 100 187-286 77-190 (345)
76 COG1742 Uncharacterized conser 73.6 43 0.00093 29.1 9.6 46 211-256 60-105 (109)
77 PF06570 DUF1129: Protein of u 72.9 24 0.00052 33.8 9.1 60 178-237 141-203 (206)
78 KOG4831 Unnamed protein [Funct 71.1 5.9 0.00013 34.5 3.9 73 182-254 51-124 (125)
79 KOG2234 Predicted UDP-galactos 70.5 72 0.0016 33.3 12.3 136 115-254 183-321 (345)
80 PF02694 UPF0060: Uncharacteri 70.0 41 0.00089 29.3 8.8 47 209-255 57-103 (107)
81 PRK13499 rhamnose-proton sympo 69.8 91 0.002 32.6 13.1 67 187-254 264-340 (345)
82 COG3238 Uncharacterized protei 64.0 81 0.0018 29.1 10.1 103 143-252 31-143 (150)
83 KOG1581 UDP-galactose transpor 63.6 33 0.00071 35.3 8.1 66 184-252 242-310 (327)
84 PF15169 DUF4564: Domain of un 63.5 10 0.00023 36.0 4.3 67 231-310 15-84 (187)
85 PRK02971 4-amino-4-deoxy-L-ara 60.3 61 0.0013 28.9 8.5 74 369-445 53-126 (129)
86 KOG4314 Predicted carbohydrate 60.1 66 0.0014 31.3 9.0 150 107-257 126-278 (290)
87 PF04973 NMN_transporter: Nico 59.8 78 0.0017 29.5 9.6 105 128-233 29-133 (181)
88 PRK02237 hypothetical protein; 58.9 1.3E+02 0.0027 26.4 9.7 47 209-255 59-105 (109)
89 COG4858 Uncharacterized membra 58.0 1.3E+02 0.0029 28.9 10.5 64 176-239 154-220 (226)
90 PRK10452 multidrug efflux syst 51.5 1.2E+02 0.0027 26.7 8.9 32 419-450 81-112 (120)
91 KOG1442 GDP-fucose transporter 45.9 37 0.0008 34.6 5.1 134 115-249 184-321 (347)
92 PF04342 DUF486: Protein of un 44.1 38 0.00082 29.5 4.2 64 189-252 40-105 (108)
93 PRK15051 4-amino-4-deoxy-L-ara 39.3 1.7E+02 0.0036 25.2 7.7 60 374-438 47-106 (111)
94 COG4975 GlcU Putative glucose 36.5 14 0.00031 36.9 0.6 59 184-242 210-268 (288)
95 KOG3392 Exon-exon junction com 35.9 20 0.00043 31.6 1.3 22 49-70 27-48 (147)
96 PF02792 Mago_nashi: Mago nash 34.6 15 0.00032 33.4 0.4 21 48-68 22-42 (143)
97 PF12398 DUF3660: Receptor ser 33.8 29 0.00064 25.2 1.7 28 33-60 3-30 (42)
98 PF13536 EmrE: Multidrug resis 33.1 2.6E+02 0.0056 23.6 7.9 63 376-444 47-109 (113)
99 COG3169 Uncharacterized protei 31.7 1E+02 0.0022 26.7 4.8 62 190-251 48-111 (116)
100 PRK09541 emrE multidrug efflux 29.9 3.7E+02 0.0079 23.3 8.6 26 419-444 81-106 (110)
101 KOG1583 UDP-N-acetylglucosamin 29.7 22 0.00047 36.2 0.6 70 180-252 230-311 (330)
102 PF05653 Mg_trans_NIPA: Magnes 29.0 5.6E+02 0.012 26.0 10.7 29 268-296 5-33 (300)
103 PF07857 DUF1632: CEO family ( 28.7 3.6E+02 0.0079 27.0 9.1 70 184-253 55-132 (254)
104 TIGR00688 rarD rarD protein. T 28.0 5.4E+02 0.012 24.6 11.5 58 376-438 82-139 (256)
105 COG1966 CstA Carbon starvation 25.7 9.8E+02 0.021 26.8 12.3 57 92-150 107-163 (575)
106 KOG1582 UDP-galactose transpor 25.5 2.1E+02 0.0045 29.4 6.6 72 188-259 261-336 (367)
107 TIGR01528 NMN_trans_PnuC nicot 24.5 1.2E+02 0.0027 28.6 4.7 24 211-234 114-137 (189)
108 PF02554 CstA: Carbon starvati 23.4 9.1E+02 0.02 25.7 11.1 27 227-253 233-262 (376)
No 1
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=100.00 E-value=3.1e-50 Score=389.36 Aligned_cols=308 Identities=21% Similarity=0.253 Sum_probs=254.3
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhC------cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCC---cc-------cccccC
Q 012821 118 VIAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGI---VT-------DEMLSM 181 (456)
Q Consensus 118 ~il~~~~v~~G~~N~V~~K~~~~------~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~---i~-------~e~~~~ 181 (456)
.++.+.||++|+.|+++.||+++ +-|+||+.|+..|++|+..++..+.++|.+... .. ++..++
T Consensus 5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf 84 (372)
T KOG3912|consen 5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF 84 (372)
T ss_pred hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence 46789999999999999999996 469999999999999987776666666554322 22 122245
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC---C
Q 012821 182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG---S 258 (456)
Q Consensus 182 p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg---~ 258 (456)
++..|+.|++||++++.++|+|+++|+++++||+|++.|+||.++|..||+|+.+..||+|++.+.+|++++...+ .
T Consensus 85 ~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~ 164 (372)
T KOG3912|consen 85 NPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV 164 (372)
T ss_pred CcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence 6677889999999999999999999999999999999999999999999999999999999999999999997653 2
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHH-HHHHHhhhhhcccCCCCC
Q 012821 259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQAL-FICLLLPFLSKLWGIPFS 337 (456)
Q Consensus 259 ~~~~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i-~~~lllP~~~~~~g~~~~ 337 (456)
++.-..-.+.+.|+++++++|++.|+|+|+|||.++++ ++++.+.+||||+||+. ++.+.+|++..+.|.+++
T Consensus 165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~------nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS 238 (372)
T KOG3912|consen 165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS------NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFS 238 (372)
T ss_pred cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc------cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCc
Confidence 22111112457899999999999999999999999987 88899999999999965 455779998888887887
Q ss_pred Cchhh-hhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccC
Q 012821 338 QLPIY-LRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLG 416 (456)
Q Consensus 338 ~~~~~-l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G 416 (456)
..|+. ++|..+.+...+..+. .......+++..++||+.++.++|+.||++|++.|++|+ ..+|++.++. |
T Consensus 239 ~~~~g~~eD~~~~~~~~~e~p~----l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt-~~IWv~si~m---~ 310 (372)
T KOG3912|consen 239 CNPRGVLEDWGDAFAALQESPS----LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRT-YVIWVFSIAM---G 310 (372)
T ss_pred CCCCcchhhHHHHHHHhcCCch----hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhh-hhhhHhHHHH---H
Confidence 77776 7777766654443320 011224456677799999999999999999999999997 8999999885 7
Q ss_pred CCCCCchhhHHHHHHHHHhhhhcc
Q 012821 417 VASSLPTGFVAGAVILVMGLLIYS 440 (456)
Q Consensus 417 ~~~~~~~~~liG~vilv~G~liYn 440 (456)
|+ .++..|+.||++++.|+++||
T Consensus 311 ~E-~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WE-YFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHH
Confidence 74 577799999999999999999
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=100.00 E-value=1.1e-33 Score=287.35 Aligned_cols=285 Identities=21% Similarity=0.213 Sum_probs=218.3
Q ss_pred hhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhc
Q 012821 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL 207 (456)
Q Consensus 128 G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~t 207 (456)
...|+....+..+ ..|.|.+|+..+.+..+++|.+++.+|+..++. .+..+.++|+|+++|+||+.+|.+.+.|+.||
T Consensus 26 ~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~-~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 26 TGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW-LKVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccc-hhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3345555556655 899999999998555566666666666554332 23456789999999999999999999999999
Q ss_pred chhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC--CCCCcchHHHHHHHHHHHHHHHH
Q 012821 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAAD 285 (456)
Q Consensus 208 s~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~--s~~~~~iig~lLiilS~i~~A~~ 285 (456)
+.++.|+|+|+.||+++++|++|||+||++.|++|++++++|+++++.++...++ +.+++.+.|++++++|++++|++
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~ 183 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS 183 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876533221 22356799999999999999999
Q ss_pred HHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcch
Q 012821 286 TVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPL 365 (456)
Q Consensus 286 ~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~l 365 (456)
+|+||+.+|++ |..++.||+|+||+++..+.++++.. +++.+.-+++ ....
T Consensus 184 nV~~E~~v~~~--------~~~~~lg~~Glfg~ii~~iq~~ile~------~~i~~~~w~~---------------~~~~ 234 (334)
T PF06027_consen 184 NVLEEKLVKKA--------PRVEFLGMLGLFGFIISGIQLAILER------SGIESIHWTS---------------QVIG 234 (334)
T ss_pred HHHHHHhcccC--------CHHHHHHHHHHHHHHHHHHHHHheeh------hhhhccCCCh---------------hhHH
Confidence 99999999875 33456799999999987776665431 1111111111 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCCC
Q 012821 366 LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTA 445 (456)
Q Consensus 366 l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~~ 445 (456)
+.+.|.++.+.++.....+++++||+..++......|.+. ++.+.+ .| .+++|++++|++++++|.++|+..+++
T Consensus 235 ~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~al-i~~i~~--f~--~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 235 LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYAL-IIDIFF--FG--YKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHH-HHHHHh--cC--ccccHHHHHHHHHHHHHhheEEccCCc
Confidence 5567888888899999999999999999997654444333 333332 23 357899999999999999999987765
Q ss_pred CCC
Q 012821 446 SPS 448 (456)
Q Consensus 446 ~~~ 448 (456)
..+
T Consensus 310 ~~~ 312 (334)
T PF06027_consen 310 EEE 312 (334)
T ss_pred ccc
Confidence 543
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.94 E-value=7.8e-25 Score=219.81 Aligned_cols=289 Identities=22% Similarity=0.272 Sum_probs=211.0
Q ss_pred HhhhhHHHHHHHHhC-cCCC-hhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHH
Q 012821 126 LLGVGNRVLYKLALV-PLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAA 203 (456)
Q Consensus 126 ~~G~~N~V~~K~~~~-~~f~-yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia 203 (456)
+.-..|.+..+.... +.++ ||.+++...++.+.++.+....... .++.++.|.+++++++++|++++.+++.+
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 333446566655444 4455 7999999876655544433322211 33456788899999999999999999999
Q ss_pred hhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCC---CCcchHHHHHHHHHHH
Q 012821 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSL---KGAGIFWSLLMIVSFL 280 (456)
Q Consensus 204 ~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~---~~~~iig~lLiilS~i 280 (456)
+.|+|.|.++++|++.++++|+++++++||||++.||+|++++++|+++...++..+++.. ......|.+++++|.+
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~ 164 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLL 164 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999887654332211 1122348999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCC
Q 012821 281 LQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGC 360 (456)
Q Consensus 281 ~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c 360 (456)
++|+++++|||++++| +.+.++...++.+|+.++..+..+.+. . ....++.+-......
T Consensus 165 ~~a~~~~~qe~~~~~~------~~~~~~~mfy~n~~~~~~~~~~~~~l~--~--------~~~~~~~~f~~~~p~----- 223 (303)
T PF08449_consen 165 LDAFTGVYQEKLFKKY------GKSPWELMFYTNLFSLPFLLILLFLLP--T--------GEFRSAIRFISAHPS----- 223 (303)
T ss_pred HHHHHHHHHHHHHHHh------CCcHHHHHHHHHHHHHHHHHHHHHHHH--h--------hHhhHHHHHHHHhHH-----
Confidence 9999999999999998 444566667777777765544333211 1 111222221111111
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821 361 DGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS 440 (456)
Q Consensus 361 ~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn 440 (456)
......++.++..+.+.+...++|+.||++.+++.++|.++++.+..+.| |+ .+++.+++|.++++.|+.+|+
T Consensus 224 --~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f---~~--~~~~~~~~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 224 --VLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIF---GH--PLSPLQWIGIVLVFAGIFLYS 296 (303)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhc---CC--cCChHHHHHHHHhHHHHHHHH
Confidence 12233556666677777888889999999999999999877766655444 44 478899999999999999999
Q ss_pred CCCCCCC
Q 012821 441 WTPTASP 447 (456)
Q Consensus 441 ~~~~~~~ 447 (456)
...+|++
T Consensus 297 ~~~~k~~ 303 (303)
T PF08449_consen 297 YAKKKKN 303 (303)
T ss_pred HhhccCC
Confidence 9877653
No 4
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.91 E-value=1.4e-23 Score=205.60 Aligned_cols=216 Identities=22% Similarity=0.295 Sum_probs=169.1
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC---
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP--- 260 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~--- 260 (456)
+++++||++|+++|.+.++++.+++++++|+++|+.|++|+++|+++||||+++.||++++++++|++++..++..+
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 77899999999999999999999999999999999999999999999999999999999999999999997643221
Q ss_pred --CCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccC
Q 012821 261 --GHS-----LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWG 333 (456)
Q Consensus 261 --~~s-----~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g 333 (456)
+.. .....+.|.++++++++++|+++||+||.+|+. +.++|..|.+..+|+.++..+...... +
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~------~~s~~~~N~qL~~~gi~~~~~~~~~~~---~ 168 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS------NVSLWIQNMQLYLFGILFNLLALLLSD---G 168 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc------chhHHHHHHHHHHHHHHHHHHHHhccc---c
Confidence 111 123457899999999999999999999999985 478899999999999877655433211 1
Q ss_pred CCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhcccccc
Q 012821 334 IPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLP 413 (456)
Q Consensus 334 ~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~ 413 (456)
.+. .++|+ |.|++ .+.++-++.+.+..+....++||.|++++.++.++.+.++..+....|
T Consensus 169 ~~~------~~~g~--f~G~~----------~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf- 229 (244)
T PF04142_consen 169 SAI------SESGF--FHGYS----------WWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLF- 229 (244)
T ss_pred ccc------ccCCc--hhhcc----------hHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 111 12222 22222 245667778889999999999999999999999988876666555444
Q ss_pred ccCCCCCCchhhHHHHHH
Q 012821 414 YLGVASSLPTGFVAGAVI 431 (456)
Q Consensus 414 ~~G~~~~~~~~~liG~vi 431 (456)
| .+++..+++|..+
T Consensus 230 --~--~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 230 --G--FPPSLSFLLGAAL 243 (244)
T ss_pred --C--CCCchHHhhheec
Confidence 2 3356667777654
No 5
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-21 Score=196.73 Aligned_cols=297 Identities=16% Similarity=0.189 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHH---HHHHHHHHHHHHhc------CCcccccccCC--C
Q 012821 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY---VAVYFSILYLRYHA------GIVTDEMLSMP--K 183 (456)
Q Consensus 115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y---~~v~f~il~~~~~~------~~i~~e~~~~p--~ 183 (456)
++-+.+ +.+.+.-++=..+-|...... ..+|+-+..-++.+ +++++..++...+. +..+++-..-| -
T Consensus 15 ~k~~~l-~~~t~~~~~l~l~l~ys~~~~-~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 92 (345)
T KOG2234|consen 15 MKYLSL-IVLTAQNTALTLLLRYSRTRE-KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRET 92 (345)
T ss_pred HHHHHH-HHHHHHHhhHHHHHHHHhcCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHH
Confidence 443333 333333444455555555443 44555544443344 33333333332211 11222222333 3
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCC--CC
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN--PG 261 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~--~~ 261 (456)
.+..+|+++++++|.+.++++.+.++..+|+..|..|..|+++++++|+||+++.||.+.++.++|++++..+..+ ++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999743211 11
Q ss_pred C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCc
Q 012821 262 H--SLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQL 339 (456)
Q Consensus 262 ~--s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~ 339 (456)
+ ....+.+.|...++.+|..+++++||.||++|+. +.+.|..|-.-.+||.++.++.+- +.+.+..
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s------~~s~wi~NiqL~~~g~~f~~l~~~------~~d~~~i 240 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS------NVSLWIRNIQLYFFGILFNLLTIL------LQDGEAI 240 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHHHHHh------hcccccc
Confidence 1 2245779999999999999999999999999874 578899998888888765543221 1222222
Q ss_pred hhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCC
Q 012821 340 PIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVAS 419 (456)
Q Consensus 340 ~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~ 419 (456)
. ++|+ |.|++ ...|+-++.|.+..+....++||.+++++..+.++.+.++.++....+ | .
T Consensus 241 ~---~~gf--f~G~s----------~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf---~--~ 300 (345)
T KOG2234|consen 241 N---EYGF--FYGYS----------SIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALF---D--F 300 (345)
T ss_pred c---cCCc--ccccc----------HHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHc---c--C
Confidence 1 3444 55554 345677788889999999999999999999999988777766653222 2 2
Q ss_pred CCchhhHHHHHHHHHhhhhccCCCCC
Q 012821 420 SLPTGFVAGAVILVMGLLIYSWTPTA 445 (456)
Q Consensus 420 ~~~~~~liG~vilv~G~liYn~~~~~ 445 (456)
.++..+++|..+++..+.+|+..|..
T Consensus 301 ~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 301 QLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred CchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 35668899999999999999976664
No 6
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.87 E-value=1.1e-23 Score=202.69 Aligned_cols=272 Identities=20% Similarity=0.192 Sum_probs=205.3
Q ss_pred HhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhh
Q 012821 126 LLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGA 205 (456)
Q Consensus 126 ~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~ 205 (456)
++.+.|....-.+..+.-|-|-+|+...-..-.++|..+..+|+. -.+..|+.|++.|+.|..+|.+..-|+.
T Consensus 28 L~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~~DVEaNy~vV~AyQ 100 (336)
T KOG2766|consen 28 LLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAFVDVEANYFVVKAYQ 100 (336)
T ss_pred HHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeEEeecccEEEeeehh
Confidence 344555666666667778999999887722224455555555541 2455667799999999999999999999
Q ss_pred hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCC-CCCcchHHHHHHHHHHHHHHH
Q 012821 206 ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS-LKGAGIFWSLLMIVSFLLQAA 284 (456)
Q Consensus 206 ~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s-~~~~~iig~lLiilS~i~~A~ 284 (456)
||+..+.++|++..||..+++||+|||.||++.|+.|+++|++|+++++.++-.+++. .+.|.+.|+.+++++.-++|+
T Consensus 101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaV 180 (336)
T KOG2766|consen 101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAV 180 (336)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeee
Confidence 9999999999999999999999999999999999999999999999999876433322 235778999999999999999
Q ss_pred HHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcc
Q 012821 285 DTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAP 364 (456)
Q Consensus 285 ~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ 364 (456)
+||.||.+.|+ .|..++.|+.|+||.+++.+. +++... +...-.||+ +.
T Consensus 181 SNv~EEflvkn--------~d~~elm~~lgLfGaIIsaIQ-~i~~~~------~~~tl~w~~----------------~i 229 (336)
T KOG2766|consen 181 SNVSEEFLVKN--------ADRVELMGFLGLFGAIISAIQ-FIFERH------HVSTLHWDS----------------AI 229 (336)
T ss_pred ccccHHHHHhc--------CcHHHHHHHHHHHHHHHHHHH-Hhhhcc------ceeeEeehH----------------HH
Confidence 99999999986 456677899999999998887 443321 111111221 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCC
Q 012821 365 LLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT 442 (456)
Q Consensus 365 ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~ 442 (456)
...+.|.++.++++-+...+.|..||+..++..--+ -.|...+ ..+|.+ ..|++++.|+.+..|.++|...
T Consensus 230 ~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTs---Dmwsl~i--~~FgYh--v~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 230 FLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTS---DMWSLLI--RTFGYH--VDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHH---HHHHHHH--HHHhcc--hhhhhHHHHHHHHHhhEEeecc
Confidence 233457777788999999999999999988854322 1222111 123554 6889999999999999999654
No 7
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2.2e-21 Score=188.74 Aligned_cols=291 Identities=18% Similarity=0.186 Sum_probs=195.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH--HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHH
Q 012821 118 VIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL--ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL 195 (456)
Q Consensus 118 ~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~--m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l 195 (456)
.++++..+..|.+..+.+--...+. +|-=.+.. .+|.|+.....+..-+.. .-+.++|.+.|++.....++
T Consensus 4 a~~ai~~vf~GCcsnvv~lE~L~~~--~pgsgNLITFaqFlFia~eGlif~skf~-----~~k~kiplk~Y~i~V~mFF~ 76 (330)
T KOG1583|consen 4 AAAAISLVFGGCCSNVVFLELLVRN--EPGSGNLITFAQFLFIATEGLIFTSKFF-----TVKPKIPLKDYAITVAMFFI 76 (330)
T ss_pred HHHHHHHHHHhhhchHHHHHHHHHh--CCCCeeehHHHHHHHHHHhceeeecccc-----ccCCCCchhhhheehheeee
Confidence 3456666777776555544333322 22222332 233344443332221211 12367888889998888999
Q ss_pred HHHHHHHHhh-hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC----------CC
Q 012821 196 AAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH----------SL 264 (456)
Q Consensus 196 ~~~L~~ia~~-~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~----------s~ 264 (456)
.|+.++.|+. ++|.|+|+++|++....||.++++++||||+..|+.+++++++|+++....++.+.+ ..
T Consensus 77 vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~ 156 (330)
T KOG1583|consen 77 VNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQ 156 (330)
T ss_pred eeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccc
Confidence 9999998885 599999999999999999999999999999999999999999999998542221110 11
Q ss_pred CC--cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhh
Q 012821 265 KG--AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIY 342 (456)
Q Consensus 265 ~~--~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~ 342 (456)
++ .-.+|+.++.+|.+.+|..++|||.++++|+|||||. +|+ .+ ++.+|.+..+.+ |+.+.
T Consensus 157 ~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~Ea--lFy--------tH---~LsLP~Flf~~~----div~~ 219 (330)
T KOG1583|consen 157 SDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEA--LFY--------TH---FLSLPLFLFMGD----DIVSH 219 (330)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH--HHH--------HH---HhccchHHHhcc----hHHHH
Confidence 11 1257889999999999999999999999999998887 243 33 344666554321 23222
Q ss_pred hhhhHHhhhccCC-CCCCCCCcchHHHHHHHHHHHHHHHHHHHH----hhhcHHHHHHHHHhhhhhhhhhccccccccCC
Q 012821 343 LRDGAACFLNLGT-LSSGCDGAPLLPLLFVLVNMGFNISLLHLL----KISSAIVSSLASTFSVPISVYVFTLPLPYLGV 417 (456)
Q Consensus 343 l~dg~~cf~g~~~-~~~~c~ga~ll~~lyii~ni~~N~~~~~v~----K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~ 417 (456)
+.-+..... ..+..+......+.|+++|.++|..++.-+ .+.+|++.+++.++|. ....++++.. +
T Consensus 220 ----~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRK-FvSLl~Siiy--F-- 290 (330)
T KOG1583|consen 220 ----WRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRK-FVSLLFSIIY--F-- 290 (330)
T ss_pred ----HHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHH-HHHHhheeeE--e--
Confidence 222222211 122233333466899999999999976544 5678888888889996 3444444442 1
Q ss_pred CCCCchhhHHHHHHHHHhhhhccC
Q 012821 418 ASSLPTGFVAGAVILVMGLLIYSW 441 (456)
Q Consensus 418 ~~~~~~~~liG~vilv~G~liYn~ 441 (456)
++++.+.-.+|..+++.|+++|..
T Consensus 291 ~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 291 ENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344666677899999999999983
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.73 E-value=6.5e-16 Score=154.62 Aligned_cols=297 Identities=15% Similarity=0.152 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhh-HHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH
Q 012821 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATF-GYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA 194 (456)
Q Consensus 116 ~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~-~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~ 194 (456)
+...+.+..-.+.+.-++..|+..+. +++|.+++....+ +.+... +.++....+ .++..+..+++.++.|++..
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 76 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCL---LSWSSGLPK-RLKISSALLKLLLPVAIVHT 76 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHH---HHHHhCCCC-CCCCCHHHHHHHHHHHHHHH
Confidence 34556677777888888999998874 8999999988522 222211 111111100 00111112345678899988
Q ss_pred HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHH
Q 012821 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274 (456)
Q Consensus 195 l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lL 274 (456)
....+.+.++.+++++..++++.+..+++++++++++|+|+++.+++|+++.++|+++.. +.+. +....|+++
T Consensus 77 ~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~--~~~~-----~~~~~G~~~ 149 (302)
T TIGR00817 77 IGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS--DTEL-----SFNWAGFLS 149 (302)
T ss_pred HHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc--CCcc-----cccHHHHHH
Confidence 888899999999999999999999999999999999999999999999999999997643 1111 123678999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccC
Q 012821 275 MIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLG 354 (456)
Q Consensus 275 iilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~ 354 (456)
.++|.+..|+..++.++..+++ +.|++....|...++.+ .++|+.....+.+. .++...+. ....
T Consensus 150 ~l~a~~~~a~~~v~~k~~~~~~------~~~~~~~~~~~~~~~~~---~l~p~~~~~~~~~~--~~~~~~~~----~~~~ 214 (302)
T TIGR00817 150 AMISNITFVSRNIFSKKAMTIK------SLDKTNLYAYISIMSLF---LLSPPAFITEGPPF--LPHGFMQA----ISGV 214 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhccC------CCCcccHHHHHHHHHHH---HHHHHHHHHcchHH--HHHHHHHh----hccc
Confidence 9999999999999999877632 35666666655555543 23454321111110 01000000 0000
Q ss_pred CCCCCCCCcch-HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHH
Q 012821 355 TLSSGCDGAPL-LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILV 433 (456)
Q Consensus 355 ~~~~~c~ga~l-l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv 433 (456)
.. +.... .......+..++|.+....+|+.||++.++...+. |+...+++..+ .|| +.+..+++|.++++
T Consensus 215 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~--lge--~lt~~~~~G~~lil 285 (302)
T TIGR00817 215 NV----TKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILF--FGT--KISPQQVFGTGIAI 285 (302)
T ss_pred Cc----hHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhh--cCC--CCchhHHHHHHHHH
Confidence 00 00000 11112224446777777889999999999998777 66665555443 466 48889999999999
Q ss_pred HhhhhccCCCCCCCC
Q 012821 434 MGLLIYSWTPTASPS 448 (456)
Q Consensus 434 ~G~liYn~~~~~~~~ 448 (456)
.|+++|+..+.+++.
T Consensus 286 ~Gv~l~~~~k~~~~~ 300 (302)
T TIGR00817 286 AGVFLYSRVKAQKPK 300 (302)
T ss_pred HHHHHHHHHhccCcC
Confidence 999999976554443
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.72 E-value=1.3e-15 Score=156.38 Aligned_cols=304 Identities=13% Similarity=0.094 Sum_probs=199.8
Q ss_pred CcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccc-ccccCCCchhhHHH
Q 012821 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTD-EMLSMPKAPFVAVG 190 (456)
Q Consensus 112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~-e~~~~p~~~f~i~a 190 (456)
+.++++.+++++--.+.+.-.+..|+..+. ++||++++....+.-.+........++++ .++ +..+..+++.+.+|
T Consensus 45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~llp~g 121 (350)
T PTZ00343 45 NFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRK--IPRIKSLKLFLKNFLPQG 121 (350)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999998876 67999999985333221111111111111 010 00112334577889
Q ss_pred HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchH
Q 012821 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIF 270 (456)
Q Consensus 191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~ii 270 (456)
+|........++|..+++++..++++.+..++|++++++++|+|+++.+++|++++++|++++...+. +..+.
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~ 194 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWL 194 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHH
Confidence 99988888888999999999999999999999999999999999999999999999999999764211 12367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhh
Q 012821 271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACF 350 (456)
Q Consensus 271 g~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf 350 (456)
|.++.++|.+..|+.+++-++..++++. +.++.+....-.+...++++ +++|+.....+. +..... +.. .
T Consensus 195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~l---~~lp~~~~~e~~---~~~~~~-~~~--~ 264 (350)
T PTZ00343 195 AFWCAMLSNLGSSLRSIFAKKTMKNKSE-IGENLTASNIYMLLTLIASL---ISLPLVLFFEGK---KWVPVW-TNY--T 264 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc-ccccCCHHHHHHHHHHHHHH---HHHHHHHHHhhH---HHHHHH-HHh--h
Confidence 8999999999999999999998876521 00123322111111223332 345553211100 000100 000 0
Q ss_pred hccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHH
Q 012821 351 LNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAV 430 (456)
Q Consensus 351 ~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~v 430 (456)
....... ........+...+...++|.+....+|+.|+++.++...++ |+..++++..+ .|+ +.++.+++|.+
T Consensus 265 ~~~~~~~--~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk-~V~~iv~s~l~--~ge--~lt~~~~iG~~ 337 (350)
T PTZ00343 265 ANMTNYT--KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK-RVVIIVSSIII--FQT--QVTLLGYLGMA 337 (350)
T ss_pred hcccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-HHHHhhhhHHH--hCC--CCchHhHHHHH
Confidence 0000000 00000122233445567888888899999999999999988 55565555443 354 48889999999
Q ss_pred HHHHhhhhccCC
Q 012821 431 ILVMGLLIYSWT 442 (456)
Q Consensus 431 ilv~G~liYn~~ 442 (456)
+++.|+++|+..
T Consensus 338 lii~Gv~lYs~~ 349 (350)
T PTZ00343 338 VAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHhhc
Confidence 999999999864
No 10
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.58 E-value=1.5e-15 Score=132.12 Aligned_cols=81 Identities=41% Similarity=0.742 Sum_probs=76.0
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHH-HHhcCCcccccccCCCchh
Q 012821 108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAPF 186 (456)
Q Consensus 108 ~~~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~-~~~~~~i~~e~~~~p~~~f 186 (456)
.+-.+++.++++++++|++.|++|+|++|++..+|.|||||++|+.++||+++||+++++ +|+++.+++||+++|+++|
T Consensus 49 ~s~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyKF 128 (130)
T PF08627_consen 49 QSYSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYKF 128 (130)
T ss_pred HhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCccccc
Confidence 445688999999999999999999999999999999999999999999999999999876 5889999999999999999
Q ss_pred hH
Q 012821 187 VA 188 (456)
Q Consensus 187 ~i 188 (456)
++
T Consensus 129 aI 130 (130)
T PF08627_consen 129 AI 130 (130)
T ss_pred cC
Confidence 74
No 11
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.50 E-value=5.6e-13 Score=134.87 Aligned_cols=298 Identities=20% Similarity=0.267 Sum_probs=204.0
Q ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHhCc-CCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHH
Q 012821 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL 191 (456)
Q Consensus 113 ~~~~v~il~~~~v~~G~~N~V~~K~~~~~-~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~al 191 (456)
+.....+....-.++.++..+..|+..++ .|+||++++..+++.=.+.+...-..+..+. .+-..+.+++..+.+|+
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~--~~~~~~~~~~~llpl~~ 91 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP--SKISSKLPLRTLLPLGL 91 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--CccccccchHHHHHHHH
Confidence 44555566677777888888889988886 8999999999963332322221111121111 11114466777889999
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHH
Q 012821 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFW 271 (456)
Q Consensus 192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig 271 (456)
+..++.++++.++.++|.+-.|+...+..|+|.++++++.+++|++.-++.++.++.|+.+...... +..+.|
T Consensus 92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G 164 (316)
T KOG1441|consen 92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFG 164 (316)
T ss_pred HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998765111 123788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhh
Q 012821 272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFL 351 (456)
Q Consensus 272 ~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~ 351 (456)
.+..++|.+..++++++.|+.+++. ++++|...+-...+-.+++ ++++|......+. .. . ++.
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~ll~y~ap~s~~--~Ll~P~~~~~~~~---------~~-~-~~~ 227 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSK----GESLNSMNLLYYTAPISLI--FLLIPFLDYVEGN---------KF-V-GFL 227 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHHHHHhhhHHHH--HHhcchHhhhccc---------ce-e-eee
Confidence 8899999999999999999999642 1235433322222222222 1223654322110 00 0 110
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhcc-ccccccCCCCCCchhhHHHHH
Q 012821 352 NLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFT-LPLPYLGVASSLPTGFVAGAV 430 (456)
Q Consensus 352 g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~-l~~~~~G~~~~~~~~~liG~v 430 (456)
. .+. +- +...+ ++--++..+.|++...++.+.||++.+++..++.. .+++.+ +.| ++ +.++.++.|..
T Consensus 228 ~-~~~--~~-~~~~~-~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~-~vi~~s~~iF---~~--pvt~~n~~G~~ 296 (316)
T KOG1441|consen 228 T-APW--FV-TFLIL-LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRI-VVIVVSWLIF---GN--PVTFLNALGYA 296 (316)
T ss_pred c-ccc--ch-hhHHH-HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEE-EEEEeEeeee---cC--CCchhhHHHHH
Confidence 0 000 00 01111 11125667899999999999999999999988864 444444 333 44 57889999999
Q ss_pred HHHHhhhhccCCCCCCC
Q 012821 431 ILVMGLLIYSWTPTASP 447 (456)
Q Consensus 431 ilv~G~liYn~~~~~~~ 447 (456)
+=++|+++|+..+.+..
T Consensus 297 iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 297 IAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 99999999998765544
No 12
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.43 E-value=6.5e-12 Score=124.61 Aligned_cols=265 Identities=15% Similarity=0.171 Sum_probs=192.0
Q ss_pred cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhH
Q 012821 141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFL 220 (456)
Q Consensus 141 ~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~I 220 (456)
..|+||-|+.....++..++-... .+.++. +.+.+.|+|+|...++-..+++.+++-|+-|++=|.+.+-..+.+
T Consensus 46 ~rF~~~~fL~~~q~l~~~~~s~~~--l~~~k~---~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKm 120 (327)
T KOG1581|consen 46 ERFEHSLFLVFCQRLVALLVSYAM--LKWWKK---ELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKM 120 (327)
T ss_pred ccccccHHHHHHHHHHHHHHHHHH--Hhcccc---cCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhh
Confidence 358999999999877777666333 222221 134467899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012821 221 VWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG--HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQ 298 (456)
Q Consensus 221 p~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~--~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~ 298 (456)
+-+|++..+.-||||+.++++.++++.+|+.+-...+++++ ++..++.+.|.+|+.....+.++-+..|.++|++|
T Consensus 121 IPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-- 198 (327)
T KOG1581|consen 121 IPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-- 198 (327)
T ss_pred hHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC--
Confidence 99999999999999999999999999999988765433332 22345789999999999999999999999999987
Q ss_pred hhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHH
Q 012821 299 RLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFN 378 (456)
Q Consensus 299 ~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N 378 (456)
++..+.+.....+|.+++..+-+ ...|. +.++.. |....+ +| +.-..+|-.+++..|
T Consensus 199 ----k~s~~~mM~~vNLf~~i~~~~~l----i~qg~--------~~~av~-F~~~hp---~~---~~Di~l~s~~gavGQ 255 (327)
T KOG1581|consen 199 ----KVSSLHMMFGVNLFSAILNGTYL----ILQGH--------LLPAVS-FIKEHP---DV---AFDILLYSTCGAVGQ 255 (327)
T ss_pred ----CccHhHHHHHHHHHHHHHHHHhh----hcCCC--------CchHHH-HHHcCh---hH---HHHHHHHHHhhhhhh
Confidence 44444444444555554433210 01110 011110 111111 11 223467888889999
Q ss_pred HHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821 379 ISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS 440 (456)
Q Consensus 379 ~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn 440 (456)
.+..+-++.-++++...+++.|...++.+.++.+ |+ +..+.|..|..+++.|+.+=.
T Consensus 256 ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f---~h--~~s~~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 256 LFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVF---GH--PLSSEQWLGVLIVFGGIFLEI 312 (327)
T ss_pred heehhhHhhcccHHHHHHHHHHHHHHHHHHHHHh---CC--ccchhhccCeeeehHHHHHHH
Confidence 9999888988999999999999766666655554 33 467788888877766655433
No 13
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.39 E-value=8e-11 Score=121.69 Aligned_cols=298 Identities=13% Similarity=0.161 Sum_probs=176.9
Q ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH-HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHH
Q 012821 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL-ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL 191 (456)
Q Consensus 113 ~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~-m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~al 191 (456)
|+.+.....+++-+.-....++.|...+.-- .|+..... ..++.++. +.+.+.+.+....++.. ...+.++++.|+
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~-~~~~~~~~R~~iA~l~L-l~~~~~~~~~~~~~~~~-~~~~~~l~l~g~ 86 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGL-NIYPFLGYSYLLASLLL-LPSLFFTNRSRSLPPLS-VSILSKIGLLGF 86 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCC-CccHHHHHHHHHHHHHH-HHHHHHHHHhcccCcch-HHHHHHHHHHHH
Confidence 4556666666666666677888888885422 22322222 22222222 22222332211111100 001134566777
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHH------hcCcccchhhhHHHHHhhheeeEEecCCCC-----
Q 012821 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP----- 260 (456)
Q Consensus 192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iF------LkrRy~~~q~lGv~lVi~Gviivv~sg~~~----- 260 (456)
+-.+...+.+.|+.++++..-.++..+.-++|++++++| +|+|.++.|++|+++.++|+.++...+...
T Consensus 87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~ 166 (358)
T PLN00411 87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVAS 166 (358)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 665555678899999999999999999999999999999 699999999999999999998765321110
Q ss_pred ----------C--CCC-CCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhh
Q 012821 261 ----------G--HSL-KGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPF 327 (456)
Q Consensus 261 ----------~--~s~-~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~ 327 (456)
. ... .+..++|+++.++|++..|+.++++.+..++| .+......|.++++.+... +|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~-------~~~~~~t~~~~~~~~~~~~--~~~ 237 (358)
T PLN00411 167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY-------PAAFTVSFLYTVCVSIVTS--MIG 237 (358)
T ss_pred ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CcHhHHHHHHHHHHHHHHH--HHH
Confidence 0 001 11225688999999999999999999988776 2223333343333322111 111
Q ss_pred hhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCCcchHHHHHHH-HHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhh
Q 012821 328 LSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVL-VNMGFNISLLHLLKISSAIVSSLASTFSVPISVY 406 (456)
Q Consensus 328 ~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii-~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~ 406 (456)
.. ..+.+. .... . .- ....+.++|.. +..+.+.+-...+|+.++...++...+. |+...
T Consensus 238 l~-~~~~~~---~~~~-~-------------~~-~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~-PV~a~ 297 (358)
T PLN00411 238 LV-VEKNNP---SVWI-I-------------HF-DITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLS-ILIAV 297 (358)
T ss_pred HH-HccCCc---ccce-e-------------cc-chHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHH-HHHHH
Confidence 11 100000 0000 0 00 00112233322 1223444555677899998888877766 66666
Q ss_pred hccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCCCC
Q 012821 407 VFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTAS 446 (456)
Q Consensus 407 ~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~~~ 446 (456)
+++..+ +||. +++.+++|.++++.|+.+-.+++.++
T Consensus 298 llg~l~--LgE~--lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 298 VMGAIF--LNDS--LYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHH--hCCC--CcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 655444 4664 88899999999999999988764433
No 14
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.32 E-value=7e-11 Score=120.09 Aligned_cols=237 Identities=22% Similarity=0.262 Sum_probs=165.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCC-CC
Q 012821 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS-LK 265 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s-~~ 265 (456)
+..+.+=++++...+.|+.+|+.++..++..+.=.||+.++.+|.+.|+++.+.+++++.+.|++++...++.+.++ ..
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a 242 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA 242 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence 45566778899999999999999999999999999999999999999999999999999999999998866543222 12
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhh
Q 012821 266 GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRD 345 (456)
Q Consensus 266 ~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~d 345 (456)
.....|+++-++|++.+|.-.|.--+...+++ +++|+-.+-|++|+|-+++..+.+-++... +.|--++|....
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg----~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q- 316 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEG----ERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQ- 316 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccccc----ccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCce-
Confidence 34589999999999999999888777666642 247776667888998887554322121222 222223433211
Q ss_pred hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821 346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF 425 (456)
Q Consensus 346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~ 425 (456)
+.| ..+...+.+++--.+=..-+-..|.++.++.+++.+||+.++=. .+ .| ...++.+
T Consensus 317 -~~~----------------vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~-l~--k~--~~~S~~~ 374 (416)
T KOG2765|consen 317 -FSL----------------VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADV-LI--KG--KHPSALY 374 (416)
T ss_pred -eEe----------------eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHH-HH--cC--CCCCHHH
Confidence 000 11111122222122212222346888889999999998876533 22 23 3467799
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCC
Q 012821 426 VAGAVILVMGLLIYSWTPTASPSSAC 451 (456)
Q Consensus 426 liG~vilv~G~liYn~~~~~~~~~~~ 451 (456)
++|.+-++.|.++=|...+..+.+.+
T Consensus 375 iiGsi~Ifv~Fv~vn~~~~~~~~~~~ 400 (416)
T KOG2765|consen 375 IIGSIPIFVGFVIVNISSENSKKDPL 400 (416)
T ss_pred HHHHHHHHHHHhheeccccccccccc
Confidence 99999999999999987666555543
No 15
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.23 E-value=8.5e-11 Score=112.87 Aligned_cols=221 Identities=17% Similarity=0.165 Sum_probs=154.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCC
Q 012821 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK 265 (456)
Q Consensus 186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~ 265 (456)
..+|+...+.++.+..+++....+.-.+.. |..+..+++++...++|+++..||.+......|+.++......+.....
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 457889999999999999999888889988 9999999999999999999999999998888888876543222111112
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhh
Q 012821 266 GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRD 345 (456)
Q Consensus 266 ~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~d 345 (456)
++.+.+..+++.+++..++..+|+|+.+|++ +.. .|+..++.-+..+...+..... .+.
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------~~~-----~~~~~~~l~~~~~~~~~~~~~~-~~~--------- 139 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDG------DTM-----FWSRNLQLPLFGLFSTFSVLLW-SDG--------- 139 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcccCC------CCc-----hHHHHHHHHHHHHHHHHHHHhh-ccc---------
Confidence 3456777888899999999999999987764 222 2333333321111100100000 000
Q ss_pred hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821 346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF 425 (456)
Q Consensus 346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~ 425 (456)
-.+ .+. +.+++-+...+..++.+...+++...++|+.|+++.+++.++|..++..+..+.| |+ +++..+
T Consensus 140 -~~~-~~~----~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f---~~--~ls~~~ 208 (222)
T TIGR00803 140 -TLI-SNF----GFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLF---DA--KISSTF 208 (222)
T ss_pred -chh-hcc----CcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHh---cC--CccHHH
Confidence 000 000 0122334455666677778888899999999999999999999776666654443 43 477889
Q ss_pred HHHHHHHHHhhhhc
Q 012821 426 VAGAVILVMGLLIY 439 (456)
Q Consensus 426 liG~vilv~G~liY 439 (456)
++|..+++.|+.+|
T Consensus 209 ~~g~~lV~~~~~lY 222 (222)
T TIGR00803 209 YLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHeeeEeC
Confidence 99999999999988
No 16
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.20 E-value=2.7e-09 Score=103.68 Aligned_cols=213 Identities=20% Similarity=0.145 Sum_probs=143.3
Q ss_pred chhhHHHH-HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCC
Q 012821 184 APFVAVGL-LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (456)
Q Consensus 184 ~~f~i~al-lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~ 262 (456)
+++++.|. +..+...+.+.|..+++.+.-.++.+..-+++++++.+|+|+|.++.||.|+.+.++|++++...+..
T Consensus 47 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--- 123 (260)
T TIGR00950 47 LRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--- 123 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---
Confidence 34455554 56777788889999999999999999999999999999999999999999999999999887643211
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhh
Q 012821 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIY 342 (456)
Q Consensus 263 s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~ 342 (456)
+....|.++.++|.+..+..+++.-+..+++ +++....+.|....+.+ .++|..... +.+.. . .
T Consensus 124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~---~l~~~~~~~-~~~~~-~--~ 187 (260)
T TIGR00950 124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKE------GPELLQFTGWVLLLGAL---LLLPFAWFL-GPNPQ-A--L 187 (260)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcC------CchHHHHHHHHHHHHHH---HHHHHHHhc-CCCCC-c--c
Confidence 1235788999999999999999988776543 32223333333333332 234442211 11110 0 0
Q ss_pred hhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCc
Q 012821 343 LRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLP 422 (456)
Q Consensus 343 l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~ 422 (456)
..+ + .....+.++...+.+.+-...+|+.++...++..... |+...+++..+ .+| +.+
T Consensus 188 ~~~-~----------------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~-pv~~~ll~~~~--~~E--~~~ 245 (260)
T TIGR00950 188 SLQ-W----------------GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAE-PLVALLLGLLI--LGE--TLS 245 (260)
T ss_pred hHH-H----------------HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH-HHHHHHHHHHH--hCC--CCC
Confidence 000 0 0012233344455666667778999999999988877 55555555443 344 477
Q ss_pred hhhHHHHHHHHHhhh
Q 012821 423 TGFVAGAVILVMGLL 437 (456)
Q Consensus 423 ~~~liG~vilv~G~l 437 (456)
..+++|.++++.|++
T Consensus 246 ~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 246 LPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcC
Confidence 889999999998863
No 17
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1.7e-09 Score=106.15 Aligned_cols=292 Identities=15% Similarity=0.215 Sum_probs=190.7
Q ss_pred CcchHHHHHHHHHHHhhhhHHHHHHHHhCc--CCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHH
Q 012821 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP--LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV 189 (456)
Q Consensus 112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~--~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~ 189 (456)
.+-.+..++.....+.=..|..+.-+..+. +..|-|+++...++.|..+.... .. .++.+++.+||+.|.+.
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie-----~~-~~~~k~r~iP~rtY~~l 112 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIE-----LQ-LIQTKRRVIPWRTYVIL 112 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheE-----EE-eecccceecchhHhhhh
Confidence 344455666555555556677777766654 44588999999877775543321 11 13445678999999999
Q ss_pred HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcch
Q 012821 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (456)
Q Consensus 190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~i 269 (456)
+++-+-.--|.+-.+.|+.=|.|.|+.+..++=.|+-+.++=||||.++.+.++.+..+|++.-.+.+++.+ .+..+
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s---PNF~~ 189 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS---PNFNL 189 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC---CCcce
Confidence 998887777777777889999999999999999999999999999999999999999999998765544332 23457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCC-CC-eeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhH
Q 012821 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VD-LFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGA 347 (456)
Q Consensus 270 ig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~-~~-lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~ 347 (456)
+|.+++-.|-+..|+-+=+|||.+|++.. . .. +|+--+ .|+ .+++.|+.- .|.-+ ...-
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~----ss~EmvfySy~----iG~--vflf~~mvl--Tge~f-------~a~~ 250 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMNPA----SSSEMVFYSYG----IGF--VFLFAPMVL--TGELF-------SAWT 250 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhCCC----CcceEEEeeec----ccH--HHHHHHHHh--cccch-------hhhH
Confidence 88888889999999999999999998722 2 22 222111 122 223334321 12111 1111
Q ss_pred HhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHH
Q 012821 348 ACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVA 427 (456)
Q Consensus 348 ~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~li 427 (456)
.|..+--.. --..+++...-.+...+++.++|..+|.+...+.+.|..+++.+..+.| ..++.-..+-
T Consensus 251 fcaehp~~t-------yGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllF-----sKPfT~qy~~ 318 (367)
T KOG1582|consen 251 FCAEHPVRT-------YGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLF-----SKPFTEQYVW 318 (367)
T ss_pred HHHhCcHhH-------HHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHH-----cCchHHHHhh
Confidence 232211000 0022333344445667778888999999999998888655555444444 1112334455
Q ss_pred HHHHHHHhhhhccCCC
Q 012821 428 GAVILVMGLLIYSWTP 443 (456)
Q Consensus 428 G~vilv~G~liYn~~~ 443 (456)
|..++++|+++=-+..
T Consensus 319 ~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 319 SGLLVVLGIYLNMYSK 334 (367)
T ss_pred hhHHHHHHHHhhcccC
Confidence 6677888988744433
No 18
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.09 E-value=6.8e-08 Score=96.61 Aligned_cols=274 Identities=15% Similarity=0.139 Sum_probs=162.7
Q ss_pred HHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHH-HHHHH
Q 012821 120 AAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE-ALAAA 198 (456)
Q Consensus 120 l~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD-~l~~~ 198 (456)
+.+++.+.=..|-+..|...+.+ -|+..+..=.+.-.++.+.+... ++++.+ .+..+....+.|.+- .....
T Consensus 12 ~~~~~~~iWg~~~~~~K~~~~~~--~p~~~~~~R~~~a~l~ll~~~~~--~~~~~~---~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 12 ALFALYIIWGSTYLVIRIGVESW--PPLMMAGVRFLIAGILLLAFLLL--RGHPLP---TLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHhhHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHH--hCCCCC---cHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555999999887743 34433333211112222222222 111111 111223345566554 45566
Q ss_pred HHHHHh-hhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHH
Q 012821 199 TGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV 277 (456)
Q Consensus 199 L~~ia~-~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiil 277 (456)
+.+.+. .+++.+.-.++..+.-+++++++.+ +|+|++++||+|+++.++|+.++...+.. + ....|+++.++
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--~----~~~~G~l~~l~ 157 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--S----GNPWGAILILI 157 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--c----cchHHHHHHHH
Confidence 777887 8898888889999999999999985 69999999999999999998876432111 1 12468899999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHH-HhhhhhcccCCCCCCchhhhhhhHHhhhccCCC
Q 012821 278 SFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICL-LLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTL 356 (456)
Q Consensus 278 S~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~l-llP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~ 356 (456)
|.+..|+.+++.++.-++ + +. ....+|..+..+ ++|+.. ..+.+....++ .++ +
T Consensus 158 a~~~~a~~~~~~~~~~~~-------~-~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~--------- 212 (292)
T PRK11272 158 ASASWAFGSVWSSRLPLP-------V-GM-----MAGAAEMLAAGVVLLIASL-LSGERLTALPT-LSG-F--------- 212 (292)
T ss_pred HHHHHHHHHHHHHhcCCC-------c-ch-----HHHHHHHHHHHHHHHHHHH-HcCCcccccCC-HHH-H---------
Confidence 999999999998874321 1 11 123344443332 333322 11111110000 000 0
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhh
Q 012821 357 SSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGL 436 (456)
Q Consensus 357 ~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~ 436 (456)
..+..+.++...+.+.+-...+|+.++...++...+. |+...+++..+ .|| +.+..+++|.++++.|+
T Consensus 213 -------~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~-Pi~a~i~~~~~--l~E--~~t~~~iiG~~lIi~gv 280 (292)
T PRK11272 213 -------LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVN-PVVAVLLGTGL--GGE--TLSPIEWLALGVIVFAV 280 (292)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH-HHHHHHHHHHH--cCC--CCcHHHHHHHHHHHHHH
Confidence 0112223334456666777788999998888887766 55555444333 355 47888999999999999
Q ss_pred hhccCCCC
Q 012821 437 LIYSWTPT 444 (456)
Q Consensus 437 liYn~~~~ 444 (456)
++-+..+.
T Consensus 281 ~~~~~~~~ 288 (292)
T PRK11272 281 VLVTLGKY 288 (292)
T ss_pred HHHHHHHh
Confidence 99877544
No 19
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.07 E-value=9.2e-08 Score=96.01 Aligned_cols=213 Identities=16% Similarity=0.167 Sum_probs=131.0
Q ss_pred HHHHHhhh-cchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHH
Q 012821 199 TGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV 277 (456)
Q Consensus 199 L~~ia~~~-ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiil 277 (456)
+.+.+..+ +|.+.-.++.++..+++++++++++|+|++++||+|+++.++|+.+....+.++ .+....|+++.++
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~----~~~~~~G~~l~l~ 150 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG----QHVAMLGFMLTLA 150 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC----cchhHHHHHHHHH
Confidence 44566666 577777888888889999999999999999999999999999988776332111 1123568999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCC
Q 012821 278 SFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLS 357 (456)
Q Consensus 278 S~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~ 357 (456)
|.+..|..+++..+..+++ +.++......|....+.+ ++.+......+ +. ...+.. ...
T Consensus 151 aal~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~-~~~~~~-------~~~---- 209 (299)
T PRK11453 151 AAFSWACGNIFNKKIMSHS-----TRPAVMSLVVWSALIPII---PFFVASLILDG-SA-TMIHSL-------VTI---- 209 (299)
T ss_pred HHHHHHHHHHHHHHHhccc-----CccchhHHHHHHHHHHHH---HHHHHHHHhcC-ch-hhhhhh-------ccC----
Confidence 9999999999999865543 112222222222222221 11111000011 00 000000 000
Q ss_pred CCCCCcchHHHHH--HHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHh
Q 012821 358 SGCDGAPLLPLLF--VLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMG 435 (456)
Q Consensus 358 ~~c~ga~ll~~ly--ii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G 435 (456)
+...+..++| ++...+-+.+-....|+.++...++...+. |+...++...+ .||. +++.+++|.++++.|
T Consensus 210 ---~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~-Pv~a~~~~~l~--lgE~--~~~~~~iG~~lI~~g 281 (299)
T PRK11453 210 ---DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLV-PVVGLASAALL--LDER--LTGLQFLGAVLIMAG 281 (299)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHHHHH--hCCC--ccHHHHHHHHHHHHH
Confidence 0001122334 334445555666677888888777766655 77666666443 4654 788999999999999
Q ss_pred hhhccCCCC
Q 012821 436 LLIYSWTPT 444 (456)
Q Consensus 436 ~liYn~~~~ 444 (456)
+++=.++.+
T Consensus 282 v~l~~~~~~ 290 (299)
T PRK11453 282 LYINVFGLR 290 (299)
T ss_pred HHHHhcchh
Confidence 987655443
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.05 E-value=1.9e-07 Score=90.86 Aligned_cols=269 Identities=25% Similarity=0.243 Sum_probs=159.7
Q ss_pred HhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCch-hhHHHHHHHHHHHHHHHHh
Q 012821 126 LLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAP-FVAVGLLEALAAATGMAAG 204 (456)
Q Consensus 126 ~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~-f~i~allD~l~~~L~~ia~ 204 (456)
+....+....|...+. +.|++......+...... .+...++.. ......+.++++ ...-+++......+.+.+.
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (292)
T COG0697 17 LLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL--LLPLLLLEP-RGLRPALRPWLLLLLLALLGLALPFLLLFLAL 91 (292)
T ss_pred HHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH--HHHHHHhhc-ccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666665 566666555322222222 111222211 001111222233 3445566777777778889
Q ss_pred hhcchhHHHHhcchhHHHHHHHHH-HHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHHHHHHHH
Q 012821 205 AILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283 (456)
Q Consensus 205 ~~ts~s~~~mLrq~~Ip~T~llS~-iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiilS~i~~A 283 (456)
.+++.+...++..+..+++.+++. +++|+|.++.+|.|.++..+|++++..++..+... ...|.++.+++.+..|
T Consensus 92 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~----~~~g~~~~l~a~~~~a 167 (292)
T COG0697 92 KYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL----SLLGLLLALAAALLWA 167 (292)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH----HHHHHHHHHHHHHHHH
Confidence 999999999999999999999996 77799999999999999999999988654332110 4678899999999999
Q ss_pred HHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHH-HHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCCCCCC
Q 012821 284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQAL-FICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSSGCDG 362 (456)
Q Consensus 284 ~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i-~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~~c~g 362 (456)
+..++.++.. ++ + ......+ ++.+ ...+.+|...... + .+....+ .
T Consensus 168 ~~~~~~~~~~-~~------~--~~~~~~~---~~~~~~~~~~~~~~~~~~--~---~~~~~~~-~--------------- 214 (292)
T COG0697 168 LYTALVKRLS-RL------G--PVTLALL---LQLLLALLLLLLFFLSGF--G---APILSRA-W--------------- 214 (292)
T ss_pred HHHHHHHHhc-CC------C--hHHHHHH---HHHHHHHHHHHHHHhccc--c---ccCCHHH-H---------------
Confidence 9999999877 32 1 1111111 3332 1112222211100 0 0000000 0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCC
Q 012821 363 APLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWT 442 (456)
Q Consensus 363 a~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~ 442 (456)
.....+.++.....+.+-....+..++...+...... |+....+...+ .|| .....+++|.++++.|.++.+..
T Consensus 215 -~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~l~--~~e--~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 215 -LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLE-PVFAALLGVLL--LGE--PLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHHHHHH--hCC--CCcHHHHHHHHHHHHHHHHHhcc
Confidence 0111222222224555666677888887777766444 33333323222 244 46778999999999999999876
No 21
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.01 E-value=2.7e-07 Score=92.52 Aligned_cols=266 Identities=14% Similarity=0.041 Sum_probs=156.1
Q ss_pred HHHhhhhHHHHHHHHhCcCCChhHHHHHHH-hhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH-HHHHHHH
Q 012821 124 TVLLGVGNRVLYKLALVPLKHYPFFLAQLA-TFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGM 201 (456)
Q Consensus 124 ~v~~G~~N~V~~K~~~~~~f~yPff~~~~m-~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~-l~~~L~~ 201 (456)
-.+.=..|-+..|...+. -.|+.++..= .++.++. +. ++.++ + .++. +++..+.+.+-. ....+.+
T Consensus 12 a~~~Wg~~~~~~k~~~~~--~~P~~~~~~R~~~a~l~l-~~---~~~~~----~-~~~~-~~~~~~~~~l~~~~~~~~~~ 79 (295)
T PRK11689 12 AILLWSTMVGLIRGVSES--LGPVGGAAMIYSVSGLLL-LL---TVGFP----R-LRQF-PKRYLLAGGLLFVSYEICLA 79 (295)
T ss_pred HHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHH-HH---Hcccc----c-cccc-cHHHHHHHhHHHHHHHHHHH
Confidence 333345678888887765 3566666553 2222222 11 11111 1 1122 234455555533 3333444
Q ss_pred HHhh----hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCC--C--CCCCcchHHHH
Q 012821 202 AAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG--H--SLKGAGIFWSL 273 (456)
Q Consensus 202 ia~~----~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~--~--s~~~~~iig~l 273 (456)
.|.. .+++..-.++..+.-+++++++++++|+|.++.||+|+++.++|+.+...++.+.+ + ........|++
T Consensus 80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~ 159 (295)
T PRK11689 80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG 159 (295)
T ss_pred HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence 5554 35555667888888999999999999999999999999999999988764432110 0 00012346889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhcc
Q 012821 274 LMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNL 353 (456)
Q Consensus 274 LiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~ 353 (456)
+.++|.++.|+.+++-++.-+++ |.... ++......+.+... ..+.+..+.. .+.+
T Consensus 160 ~~l~aa~~~A~~~v~~k~~~~~~--------~~~~~------~~~~~~~~l~~~~~-~~~~~~~~~~---~~~~------ 215 (295)
T PRK11689 160 LAFIGAFIWAAYCNVTRKYARGK--------NGITL------FFILTALALWIKYF-LSPQPAMVFS---LPAI------ 215 (295)
T ss_pred HHHHHHHHHHHHHHHHhhccCCC--------CchhH------HHHHHHHHHHHHHH-HhcCccccCC---HHHH------
Confidence 99999999999999999964432 32221 11111112222111 1111100000 0111
Q ss_pred CCCCCCCCCcchHHHHHH-HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHH
Q 012821 354 GTLSSGCDGAPLLPLLFV-LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVIL 432 (456)
Q Consensus 354 ~~~~~~c~ga~ll~~lyi-i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vil 432 (456)
..++|. +...+.+.+-...+|+.++...++...+. |+...++...+ .||. .++.+++|.+++
T Consensus 216 ------------~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~i~~~~~--lgE~--~~~~~~iG~~lI 278 (295)
T PRK11689 216 ------------IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFT-PVLSAALAALL--LSTP--LSFSFWQGVAMV 278 (295)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhH-HHHHHHHHHHH--hCCC--CcHHHHHHHHHH
Confidence 112222 23345677777888999999999887766 67666666544 4554 788999999999
Q ss_pred HHhhhhccCC
Q 012821 433 VMGLLIYSWT 442 (456)
Q Consensus 433 v~G~liYn~~ 442 (456)
+.|+++-.+.
T Consensus 279 ~~gv~~~~~~ 288 (295)
T PRK11689 279 TAGSLLCWLA 288 (295)
T ss_pred HHhHHHHhhh
Confidence 9998766543
No 22
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.91 E-value=1.4e-07 Score=94.54 Aligned_cols=207 Identities=12% Similarity=0.085 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCc
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~ 267 (456)
.-+++-..+..+.+.|..++|.+.-.++..+.-+++++++++|+|+|.++.||+|+++.++|++++..++ + + .
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~--~-~----~ 150 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF--G-S----L 150 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc--C-C----c
Confidence 3345566677888899999999999999999999999999999999999999999999999998865321 1 0 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHH-hhhhhcccCCCCCCchhhhhhh
Q 012821 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL-LPFLSKLWGIPFSQLPIYLRDG 346 (456)
Q Consensus 268 ~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~ll-lP~~~~~~g~~~~~~~~~l~dg 346 (456)
..+.++|.+..|+..++.++.-++ +..+.+ ....++..+..+. +|... .+..+.. .+.
T Consensus 151 ----~~~~l~aa~~~a~~~i~~r~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~ 209 (296)
T PRK15430 151 ----PIIALGLAFSFAFYGLVRKKIAVE------AQTGML----IETMWLLPVAAIYLFAIAD----SSTSHMG---QNP 209 (296)
T ss_pred ----cHHHHHHHHHHHHHHHHHHhcCCC------CchhHH----HHHHHHHHHHHHHHHHHcc----CCccccc---CCc
Confidence 135667889999999988874321 111111 1123333322221 12110 0000000 000
Q ss_pred HHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhH
Q 012821 347 AACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFV 426 (456)
Q Consensus 347 ~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~l 426 (456)
. ..+.+.....+...+.+++.....|+.+|...++...+. |+...+++..+ .|| +.++.++
T Consensus 210 ~--------------~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~-Pv~a~~~g~l~--l~E--~~~~~~~ 270 (296)
T PRK15430 210 M--------------SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIG-PTLMFLLAVTF--YGE--KPGADKM 270 (296)
T ss_pred H--------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH-HHHHHHHHHHH--HcC--CCCHHHH
Confidence 0 000011111123446677788888999999999987766 44444444332 244 4788899
Q ss_pred HHHHHHHHhhhhccC
Q 012821 427 AGAVILVMGLLIYSW 441 (456)
Q Consensus 427 iG~vilv~G~liYn~ 441 (456)
+|.++++.|..+...
T Consensus 271 ~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 271 VTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888777654
No 23
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.83 E-value=3e-07 Score=91.40 Aligned_cols=213 Identities=14% Similarity=0.026 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCC
Q 012821 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKG 266 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~ 266 (456)
+.-+........+.+.|+.+++.+.-.++..+..+++++++++++|+|++++||+|+.+.++|+.++..++.+. .
T Consensus 67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~--~--- 141 (281)
T TIGR03340 67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ--H--- 141 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc--c---
Confidence 33455677777888899999999999999999999999999999999999999999999999998765432111 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHH-HHHhhhhhcccCCCCCCchhhhhh
Q 012821 267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFI-CLLLPFLSKLWGIPFSQLPIYLRD 345 (456)
Q Consensus 267 ~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~-~lllP~~~~~~g~~~~~~~~~l~d 345 (456)
...+..+.+++.+..|+.+++..+.-++ .+......+...++.+.. .++.+........+.. +. +
T Consensus 142 -~~~g~~~~l~aal~~a~~~i~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~ 207 (281)
T TIGR03340 142 -RRKAYAWALAAALGTAIYSLSDKAAALG--------VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF--PY---A 207 (281)
T ss_pred -chhHHHHHHHHHHHHHHhhhhccccccc--------hhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh--hh---H
Confidence 1234567788888899988865553222 121111111112333221 1111110000000000 00 0
Q ss_pred hHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhh
Q 012821 346 GAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGF 425 (456)
Q Consensus 346 g~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~ 425 (456)
. ....+.....+...+-+.+-....++.++...+....+. |+...+++..+ .|| +.++.+
T Consensus 208 -~--------------~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~--lgE--~~~~~~ 267 (281)
T TIGR03340 208 -R--------------QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWF--LNE--RWYLTR 267 (281)
T ss_pred -H--------------HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHH--hCC--CccHHH
Confidence 0 000111222333445566666677777775555444333 54444444332 355 478899
Q ss_pred HHHHHHHHHhhhh
Q 012821 426 VAGAVILVMGLLI 438 (456)
Q Consensus 426 liG~vilv~G~li 438 (456)
++|.++++.|+.+
T Consensus 268 ~iG~~lil~Gv~l 280 (281)
T TIGR03340 268 LMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHhHHh
Confidence 9999999999875
No 24
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.79 E-value=1.2e-05 Score=80.68 Aligned_cols=271 Identities=13% Similarity=-0.023 Sum_probs=157.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHH-HhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHH
Q 012821 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL-ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL 195 (456)
Q Consensus 117 v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~-m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l 195 (456)
+..+.+.++..+ .|.++.|...+.. -|+..... +.++.+.+ +. +.+.++...++ ..++..+..|++...
T Consensus 14 ~~~~~la~~~~~-~~~~~~K~~~~~~--~~~~~~~~R~~~a~l~l-~~--~~~~~~~~~~~----~~~~~~~~~g~~~~~ 83 (293)
T PRK10532 14 ILLLLIAMASIQ-SGASLAKSLFPLV--GAPGVTALRLALGTLIL-IA--IFKPWRLRFAK----EQRLPLLFYGVSLGG 83 (293)
T ss_pred HHHHHHHHHHHH-hhHHHHHHHHHHc--CHHHHHHHHHHHHHHHH-HH--HHhHHhccCCH----HHHHHHHHHHHHHHH
Confidence 455556666666 5556799887742 23333332 33332222 11 12211111111 112335577888788
Q ss_pred HHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHH
Q 012821 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLM 275 (456)
Q Consensus 196 ~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLi 275 (456)
.+.+.+.|..++|.+.-.++..+.-.++++++ +||..+ +.++.+.++|+.+....+.+.+ +....|+++.
T Consensus 84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~----~~~~~G~ll~ 153 (293)
T PRK10532 84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVS----HVDLTGAALA 153 (293)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcc----cCChHHHHHH
Confidence 88888889999999987777777777777766 355544 4556677888877653332211 1235689999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCC
Q 012821 276 IVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGT 355 (456)
Q Consensus 276 ilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~ 355 (456)
++|.+..|+..++-.|.-+++ ++... .+..+++. .+++|+.....+ +. ... ....
T Consensus 154 l~aa~~~a~~~v~~r~~~~~~--------~~~~~-~~~~~~~~---~~l~~~~~~~~~-~~---~~~-~~~~-------- 208 (293)
T PRK10532 154 LGAGACWAIYILSGQRAGAEH--------GPATV-AIGSLIAA---LIFVPIGALQAG-EA---LWH-WSIL-------- 208 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccC--------CchHH-HHHHHHHH---HHHHHHHHHccC-cc---cCC-HHHH--------
Confidence 999999999999877764432 22221 22222222 233443221111 00 000 0000
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHh
Q 012821 356 LSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMG 435 (456)
Q Consensus 356 ~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G 435 (456)
.....+.++..++.+.+....+|+.+|...++...+. |+...+++..+ +|| +.++.+++|.++++.|
T Consensus 209 --------~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~-Pv~a~l~~~l~--lgE--~~~~~~~iG~~lIl~~ 275 (293)
T PRK10532 209 --------PLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSME-PALAAVSGMIF--LGE--TLTLIQWLALGAIIAA 275 (293)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhH-HHHHHHHHHHH--hCC--CCcHHHHHHHHHHHHH
Confidence 0112344555566777778888999999999988766 55555555443 355 4788999999999999
Q ss_pred hhhccCCCCC
Q 012821 436 LLIYSWTPTA 445 (456)
Q Consensus 436 ~liYn~~~~~ 445 (456)
.+.+.+..++
T Consensus 276 ~~~~~~~~~~ 285 (293)
T PRK10532 276 SMGSTLTIRR 285 (293)
T ss_pred HHHHHhcCCC
Confidence 9999765443
No 25
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.69 E-value=2.5e-06 Score=85.95 Aligned_cols=292 Identities=18% Similarity=0.196 Sum_probs=186.3
Q ss_pred CCCcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHH--HHhhHHHHHHHHHHHHHHhcCCcccccccCC-Cchh
Q 012821 110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMP-KAPF 186 (456)
Q Consensus 110 ~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~--~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p-~~~f 186 (456)
.++...+.+..++.+.+....=++.-|+.... ++||-.+.. ...+..+++ ++..++.|-++.|+.... .+++
T Consensus 6 ~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~----v~~lk~~~lv~~~~l~~~~~kk~ 80 (314)
T KOG1444|consen 6 GSKKQSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLV----VLVLKRLGLVNFRPLDLRTAKKW 80 (314)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHH----HHHHHHhceeecCCcChHHHHHH
Confidence 34444566788889999999999999988753 445444433 332222222 233344445554443322 2667
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCC
Q 012821 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKG 266 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~ 266 (456)
+.+.++....-..+..++.|++.+.+.++|...++.|++.=..|+|+|.++.-|.+++..++|-.+...++.+-
T Consensus 81 ~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf------ 154 (314)
T KOG1444|consen 81 FPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF------ 154 (314)
T ss_pred ccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee------
Confidence 77888888877777788899999999999999999999999999999999999999999998866654332211
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhh
Q 012821 267 AGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDG 346 (456)
Q Consensus 267 ~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg 346 (456)
...|-..+...++..+.-+++-++..+..+. ++.+....| -+++.+.+++....+| |.. .+
T Consensus 155 -~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l---~~~~lv~yN-------nl~~L~~l~~~~~~~g----e~~-~l--- 215 (314)
T KOG1444|consen 155 -NLRGYSWALANCLTTAAFVVYVKKSVDSANL---NKFGLVFYN-------NLLSLPPLLILSFITG----ELD-AL--- 215 (314)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhhccccc---cceeEEeeh-------hHHHHHHHHHHHHHhc----chH-HH---
Confidence 1223344567888899999999988875311 123333333 3333444455444443 211 11
Q ss_pred HHhhhccCCCCCCCCCcch--HHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchh
Q 012821 347 AACFLNLGTLSSGCDGAPL--LPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTG 424 (456)
Q Consensus 347 ~~cf~g~~~~~~~c~ga~l--l~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~ 424 (456)
..+.+ .|..... ...+--++-++.|++...-+...||++.+++...-. +...+-.+. +++...++.
T Consensus 216 ---~~~~~----~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~-l~t~l~~ll----~~d~~~~~~ 283 (314)
T KOG1444|consen 216 ---SLNFD----NWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNK-LLTYLGGLL----FGDKPFTFL 283 (314)
T ss_pred ---Hhhcc----cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhh-HHHHHHHHh----cCCceechh
Confidence 01111 1111111 222333455678888999999999999999984333 222222211 234457888
Q ss_pred hHHHHHHHHHhhhhccCCC
Q 012821 425 FVAGAVILVMGLLIYSWTP 443 (456)
Q Consensus 425 ~liG~vilv~G~liYn~~~ 443 (456)
-++|..+=++|-++|++.+
T Consensus 284 n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 284 NVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred hhHHHHHHhhhhhHHhhhh
Confidence 8999999999999999875
No 26
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.61 E-value=2.5e-06 Score=85.39 Aligned_cols=291 Identities=16% Similarity=0.213 Sum_probs=176.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHH-HHHHHHHHhcCCcccccccCCCchh----hHHHH
Q 012821 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVY-FSILYLRYHAGIVTDEMLSMPKAPF----VAVGL 191 (456)
Q Consensus 117 v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~-f~il~~~~~~~~i~~e~~~~p~~~f----~i~al 191 (456)
++.+++++-.+...=+-.+|+.... +.+|-|.+... +.+-| |+.+..+-+....++....+.|..+ +.-|+
T Consensus 17 ~L~lVl~yY~~Si~Ltf~~~~~~~~-f~fPLf~ts~h---~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal 92 (349)
T KOG1443|consen 17 TLALVLLYYFLSIGLTFYFKWLTKN-FHFPLFVTSLH---LAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL 92 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcC-cCCchHHHHHH---HHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh
Confidence 3334455555555556666666554 89999998886 43333 4444333222222332234444322 34455
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHH
Q 012821 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFW 271 (456)
Q Consensus 192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig 271 (456)
+-++---+.+.++.|++.+.+.|.+.+.|+|..+||.+|-=.|+++.=.+-++++.+|+++......+ ..+.|
T Consensus 93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq-------f~i~G 165 (349)
T KOG1443|consen 93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ-------FNIEG 165 (349)
T ss_pred hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc-------eeehh
Confidence 54444458899999999999999999999999999999988888888888888888888887764322 34778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhh
Q 012821 272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFL 351 (456)
Q Consensus 272 ~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~ 351 (456)
-.++..|...+++--.+-++++++..- +| -+|+... .--|-.+...++|.....-|.. ........-++
T Consensus 166 f~lv~~aS~~sGlRW~~tQ~ll~~~~~-~~--~~P~~ti---~~l~p~M~~~Ll~~~l~fEG~~-----~~~~s~~f~~~ 234 (349)
T KOG1443|consen 166 FFLVLAASLLSGLRWAFTQMLLRNQPS-AK--RNPIDTI---FHLQPWMSIGLLPLSLLFEGLH-----LITSSSIFRFQ 234 (349)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCcc-cc--CCCeeeH---HHhhhHHHHHHHHHHHHHcccc-----cchhhhHHHhc
Confidence 899999999999999999999998632 12 2334322 1122233334556533332211 11111110011
Q ss_pred ccCCCCCCCCCcchHHHHHH----HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHH
Q 012821 352 NLGTLSSGCDGAPLLPLLFV----LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVA 427 (456)
Q Consensus 352 g~~~~~~~c~ga~ll~~lyi----i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~li 427 (456)
+.+ ..+.++.++ ...++.-++...++...|.++.+++.-+.- +...++.+.. .+++ ++.....
T Consensus 235 d~~--------~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Ke-l~tl~la~ii--~~d~--ls~lN~~ 301 (349)
T KOG1443|consen 235 DTG--------LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKE-VCTLLLAIII--LKDQ--LSLLNWL 301 (349)
T ss_pred Ccc--------HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHH-HHHHHHHHHH--hhcc--hhhhHHH
Confidence 100 011111111 122334455566677889999999877663 3333333332 2333 5667889
Q ss_pred HHHHHHHhhhhccCC
Q 012821 428 GAVILVMGLLIYSWT 442 (456)
Q Consensus 428 G~vilv~G~liYn~~ 442 (456)
|+.+-+.|+.+|+.+
T Consensus 302 Gl~i~~agi~~~~~~ 316 (349)
T KOG1443|consen 302 GLAICLAGILLHRNE 316 (349)
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999999543
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.58 E-value=7.4e-07 Score=79.87 Aligned_cols=152 Identities=20% Similarity=0.262 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhh
Q 012821 271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACF 350 (456)
Q Consensus 271 g~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf 350 (456)
|.++.++|.+++|+..|+.|+.+++..+ -+.+.|.+.+..+.+...+++..+..++.... +..+...+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~-~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~------~~~~~~~~~~--- 70 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSS-NSKKLNPLNLLYYNSPISFIILLPLAFLLEGP------QLSSFFSEIF--- 70 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHhhh------hhhhHHHHhh---
Confidence 3567889999999999999999988421 01236666666666666665444333332211 1111111000
Q ss_pred hccCCCCCCCC-CcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHH
Q 012821 351 LNLGTLSSGCD-GAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGA 429 (456)
Q Consensus 351 ~g~~~~~~~c~-ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~ 429 (456)
. .+ . +.+ ......+..-+...+.|++...++|+.|+++.+++..++.++.+.+..+.+ |++ .++.+++|.
T Consensus 71 ~-~~-~--~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f---~~~--~t~~~~~G~ 141 (153)
T PF03151_consen 71 G-EE-L--SSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFF---GEP--ITPLQIIGI 141 (153)
T ss_pred h-hh-h--cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhc---CCc--CCHHHHHHH
Confidence 0 00 0 000 111223334455668999999999999999999999999876665555444 543 788999999
Q ss_pred HHHHHhhhhccC
Q 012821 430 VILVMGLLIYSW 441 (456)
Q Consensus 430 vilv~G~liYn~ 441 (456)
++.+.|.++|++
T Consensus 142 ~l~~~G~~~Ysy 153 (153)
T PF03151_consen 142 VLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHheeeC
Confidence 999999999985
No 28
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.54 E-value=5.1e-07 Score=87.40 Aligned_cols=232 Identities=14% Similarity=0.148 Sum_probs=156.6
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCC
Q 012821 179 LSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS 258 (456)
Q Consensus 179 ~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~ 258 (456)
.+.|-|.|+.-++-+.++-+-.+-|+.+.|-|.+.+=....-+=.|++.+.|+||+|++.+|.+++++++|+++-.....
T Consensus 81 D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~ 160 (337)
T KOG1580|consen 81 DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN 160 (337)
T ss_pred cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence 45677778777777778777788889999999866655555555899999999999999999999999999999875421
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCC
Q 012821 259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQ 338 (456)
Q Consensus 259 ~~~~s~~~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~ 338 (456)
.-++.......+|-+|+++|--..++-++.||++=+.|.+ .+.--+++.|-|..++--. -+-+ .| |
T Consensus 161 Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~--~g~~MM~~~NlwStL~Lg~----g~lf----TG----E 226 (337)
T KOG1580|consen 161 KVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR--TGTSMMFYTNLWSTLYLGA----GLLF----TG----E 226 (337)
T ss_pred ccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc--CchhhHHHHHHHHHHHhhh----hhee----hh----h
Confidence 1110000112467799999999999999999998777744 1222245566555444211 0111 11 2
Q ss_pred chhhhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCC
Q 012821 339 LPIYLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVA 418 (456)
Q Consensus 339 ~~~~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~ 418 (456)
+.+.+ .|...-+. .+.-..++-+...+.+++...-+.+.+-++.+++.+-|.-+++++..+.| +
T Consensus 227 lweF~-----yF~~RhP~------~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf-----~ 290 (337)
T KOG1580|consen 227 LWEFF-----YFVQRHPY------VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLF-----N 290 (337)
T ss_pred HHHHH-----HHHHhccH------HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHh-----c
Confidence 22322 12111110 01122345567778888888888999999999999888766666655555 2
Q ss_pred CCCchhhHHHHHHHHHhhhhcc
Q 012821 419 SSLPTGFVAGAVILVMGLLIYS 440 (456)
Q Consensus 419 ~~~~~~~liG~vilv~G~liYn 440 (456)
+.++..|.+|.++++.|+..=-
T Consensus 291 npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 291 NPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred CcCcHHHHHHHHHHHHHhhhHh
Confidence 3467789999999999986544
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.37 E-value=0.00026 Score=71.24 Aligned_cols=212 Identities=17% Similarity=0.028 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcc-hhHHHHHHHHHHHhcCcccchh----hhHHHHHhhheeeEEecCCCCCC
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGH 262 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq-~~Ip~T~llS~iFLkrRy~~~q----~lGv~lVi~Gviivv~sg~~~~~ 262 (456)
+.|++-..++...+.+..++..+.-..+.+ ...++..+++.+++|+|.++.| ++|++++++|++++...+.++.+
T Consensus 64 l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~ 143 (290)
T TIGR00776 64 LSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG 143 (290)
T ss_pred HHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc
Confidence 445568889999999999999998877777 6677899999999999999999 99999999998887654322211
Q ss_pred CCC-CcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchh
Q 012821 263 SLK-GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPI 341 (456)
Q Consensus 263 s~~-~~~iig~lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~ 341 (456)
..+ .+...|++.-++|.+.++...+.-++. +| |++....+...-.++.+.++.+.+ . ...|+ .++
T Consensus 144 ~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~--------~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~~--~~~ 209 (290)
T TIGR00776 144 IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV--------DGLSVLLPQAIGMVIGGIIFNLGH-I-LAKPL--KKY 209 (290)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC--------CcceehhHHHHHHHHHHHHHHHHH-h-cccch--HHH
Confidence 000 122458888899999999999988853 23 334432111111111122222222 1 10111 011
Q ss_pred hhhhhHHhhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHh-hhcHHHHHHHHHhhhhhhhhhccccccccCCCCC
Q 012821 342 YLRDGAACFLNLGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLK-ISSAIVSSLASTFSVPISVYVFTLPLPYLGVASS 420 (456)
Q Consensus 342 ~l~dg~~cf~g~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K-~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~ 420 (456)
.. + ...+..++ -.+-|++-..-.+ +..+....+.+.+- |++..+++..+ .+| .
T Consensus 210 ~~---~-----------------~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~-pvia~~~~v~~--l~E--~ 263 (290)
T TIGR00776 210 AI---L-----------------LNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLG-VIISTLGGILI--LGE--K 263 (290)
T ss_pred HH---H-----------------HHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHH-HHHHHHHHHHH--hcc--C
Confidence 11 1 01111222 2333333333445 66777777776666 55555555443 344 3
Q ss_pred CchhhH----HHHHHHHHhhhhc
Q 012821 421 LPTGFV----AGAVILVMGLLIY 439 (456)
Q Consensus 421 ~~~~~l----iG~vilv~G~liY 439 (456)
..+.++ +|.++++.|.++=
T Consensus 264 ~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 264 KTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred CCcceeehhHHHHHHHHHHHHHH
Confidence 566666 9999999998764
No 30
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.35 E-value=1.1e-06 Score=76.04 Aligned_cols=97 Identities=21% Similarity=0.203 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH-HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccch
Q 012821 160 VYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVN 238 (456)
Q Consensus 160 v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~-l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~ 238 (456)
+...+...+.+.++..++.++.|+......|.+.. .+..+.+.|..++|+ ...++.+...+++++++.+++|+|.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~ 89 (113)
T PF13536_consen 11 FLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPR 89 (113)
T ss_pred HHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 33333444433333333444444444455588876 778888899999995 6679999999999999999999999999
Q ss_pred hhhHHHHHhhheeeEEecC
Q 012821 239 QLFGCFLVGIGVIITVASG 257 (456)
Q Consensus 239 q~lGv~lVi~Gviivv~sg 257 (456)
+|+|++++++|++++..++
T Consensus 90 ~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 90 RWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 9999999999999987654
No 31
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.29 E-value=0.00015 Score=70.80 Aligned_cols=96 Identities=17% Similarity=0.124 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCC
Q 012821 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK 265 (456)
Q Consensus 186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~ 265 (456)
..+.|.+-.....+.+.|..+++.+.-.++..+.-+++++++.+|+|+|.+++||+|+++.++|++++..++ ++
T Consensus 73 ~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~~--- 146 (256)
T TIGR00688 73 LLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---GS--- 146 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---CC---
Confidence 455677777778888899999999999999999999999999999999999999999999999988764321 11
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHh
Q 012821 266 GAGIFWSLLMIVSFLLQAADTVLKEVI 292 (456)
Q Consensus 266 ~~~iig~lLiilS~i~~A~~~V~eEk~ 292 (456)
.. .+.+++.+..|+.+++.++.
T Consensus 147 -~~----~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 147 -LP----WEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred -ch----HHHHHHHHHHHHHHHHHhhc
Confidence 11 34567889999988888774
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.12 E-value=1.4e-05 Score=68.07 Aligned_cols=119 Identities=23% Similarity=0.198 Sum_probs=81.2
Q ss_pred hHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHH-HHHHHHHHHHHhhhcc
Q 012821 130 GNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLL-EALAAATGMAAGAILS 208 (456)
Q Consensus 130 ~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~all-D~l~~~L~~ia~~~ts 208 (456)
...+..|...++ ..|...+....+.-.+ .+.+.....+.+ .++.....+...++.+.+ -.++..+.+.|..+++
T Consensus 5 ~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 5 IYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred eHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 456677777776 3344444444222222 222222332221 111111122334566766 4888888899999999
Q ss_pred hhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 209 ~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
++...++.....+++++++++++|+|+++.|++|++++++|++++
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998754
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.02 E-value=1.5e-06 Score=85.74 Aligned_cols=204 Identities=15% Similarity=0.219 Sum_probs=132.8
Q ss_pred HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHHH
Q 012821 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVS 278 (456)
Q Consensus 199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiilS 278 (456)
.++.-+.|.+.+-+++=|+...|||.++++.+||.|=+..-..||+++++|..+ |.+++.+.+...+.|.++=+.|
T Consensus 118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVla 193 (347)
T KOG1442|consen 118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLA 193 (347)
T ss_pred ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHH
Confidence 344556789999999999999999999999999999999999999999999877 3344333344668888888999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhccCCCCC
Q 012821 279 FLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLNLGTLSS 358 (456)
Q Consensus 279 ~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g~~~~~~ 358 (456)
++..|+-.+|-.|..-.- ++ .+|.+..+..++..+ +++|..... | ++.+ ..+....
T Consensus 194 Sl~vAlnaiytkk~l~~v-----~~-~iw~lt~ynnv~a~l---Lflpll~ln-g----e~~~--------v~~~~~l-- 249 (347)
T KOG1442|consen 194 SLAVALNAIYTKKVLPPV-----GD-CIWRLTAYNNVNALL---LFLPLLILN-G----EFQA--------VVGFPHL-- 249 (347)
T ss_pred HHHHHHHHHhhheecccc-----cC-eehhhHHHHHHHHHH---HHHHHHHHc-c----hHHH--------HcCcccc--
Confidence 999999888877655332 11 245555555555543 345543321 1 1111 1111111
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHH----hhhcHHHHHHHHHhhh----hhhhhhccccccccCCCCCCchhhHHHHH
Q 012821 359 GCDGAPLLPLLFVLVNMGFNISLLHLL----KISSAIVSSLASTFSV----PISVYVFTLPLPYLGVASSLPTGFVAGAV 430 (456)
Q Consensus 359 ~c~ga~ll~~lyii~ni~~N~~~~~v~----K~~SA~~~~lv~svr~----pLsi~~f~l~~~~~G~~~~~~~~~liG~v 430 (456)
. ...+|+-+...-++|+..-+++ |-.|.++.++..+.+- .+.+.. .+| +.+.++.-|-+
T Consensus 250 ---~-a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~-------y~E--~ks~lwwtsn~ 316 (347)
T KOG1442|consen 250 ---P-AIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAY-------YSE--TKSGLWWTSNI 316 (347)
T ss_pred ---h-HHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHH-------HHH--HhhhheeeeeE
Confidence 0 1133444555556777777776 7788888888765552 222221 122 34555666777
Q ss_pred HHHHhhhhccCCC
Q 012821 431 ILVMGLLIYSWTP 443 (456)
Q Consensus 431 ilv~G~liYn~~~ 443 (456)
+++.|...|.+..
T Consensus 317 ~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 317 VVLVGSLAYTLVK 329 (347)
T ss_pred EEEehhHHHHHHH
Confidence 8899999999753
No 34
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=6.5e-05 Score=76.21 Aligned_cols=70 Identities=23% Similarity=0.391 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC
Q 012821 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP 260 (456)
Q Consensus 191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~ 260 (456)
.++.++..++++|+.+.|.++.+-|....++++++++..+||+|+++.++.|+.++++|.++.+..++.+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~ 127 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE 127 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence 3578889999999999999999999999999999999999999999999999999999998877655433
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.65 E-value=0.00075 Score=60.11 Aligned_cols=132 Identities=24% Similarity=0.272 Sum_probs=84.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHH-HHHHHHHH
Q 012821 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALAA 197 (456)
Q Consensus 119 il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~-allD~l~~ 197 (456)
+++++--.+-....++.|+-.+.+ -|-|.+..=++.-... ...+...+.+-+...| .....|.|++. |+.-.++-
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~v--dp~~At~IRtiVi~~~-l~~v~~~~g~~~~~~~-~~~k~~lflilSGla~glsw 81 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGV--DPDFATTIRTIVILIF-LLIVLLVTGNWQAGGE-IGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc--CccHHHHHHHHHHHHH-HHHHHHhcCceecccc-cCcceehhhhHHHHHHHHHH
Confidence 344455556677899999988732 3444544432222211 1111222222111111 11222556554 54555555
Q ss_pred HHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 198 ~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
.+-|-|+..=.+|...-++....+++.++|++|||.|++..||+|+.++++|++++-
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 566678888888877888999999999999999999999999999999999988763
No 36
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.42 E-value=0.0024 Score=57.02 Aligned_cols=67 Identities=27% Similarity=0.392 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
++..+++-...|...+....++++-.++++.....+.+.++|+++++.+.+..|++|+.+.++|+++
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 4556777778888888888899999999999999999999999999999999999999999999764
No 37
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.31 E-value=0.00052 Score=68.02 Aligned_cols=132 Identities=16% Similarity=0.202 Sum_probs=87.3
Q ss_pred CcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHH-HHHHHHHHHHHHhcCCcccccccCCCchhh-HH
Q 012821 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY-VAVYFSILYLRYHAGIVTDEMLSMPKAPFV-AV 189 (456)
Q Consensus 112 ~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y-~~v~f~il~~~~~~~~i~~e~~~~p~~~f~-i~ 189 (456)
+.+...+.+.+. ..+.++-.+..|...+. |--+++.-.++= .+.|-|.+++++- + --+.++++++ +=
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~----p~e~a~~r~l~~mlit~pcliy~~~~---v---~gp~g~R~~LiLR 103 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND----PMELASFRLLVRMLITYPCLIYYMQP---V---IGPEGKRKWLILR 103 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccC----hhHhhhhhhhhehhhhheEEEEEeee---e---ecCCCcEEEEEee
Confidence 666777777666 66677777777766542 222222221111 1111111111211 1 1122334443 44
Q ss_pred HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
|+.-..+-.++|.|+.|++.+=-.+..-+.-++|.++++++||.+|++.+-+|..+.+.|+++.+
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 77777888899999999998877777778889999999999999999999999999999999875
No 38
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.09 E-value=0.0093 Score=57.81 Aligned_cols=65 Identities=25% Similarity=0.318 Sum_probs=56.9
Q ss_pred hHHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhhee
Q 012821 187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (456)
Q Consensus 187 ~i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvi 251 (456)
+..+.+ -.++..+.+.+..+++++....+.....+++++++++++|.+++..|++|+.+++.|+.
T Consensus 195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 445555 45677777789999999999999999999999999999999999999999999999863
No 39
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.90 E-value=0.0071 Score=52.54 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
.+..++..+...++..+|.+.-..+-+...+++++++++++|.|.+..|++|+.++++|++++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 456666777778888899987666667999999999999999999999999999999998764
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=96.84 E-value=0.0075 Score=57.63 Aligned_cols=218 Identities=18% Similarity=0.220 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCCCCCCCCcchHHH
Q 012821 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (456)
Q Consensus 193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~ 272 (456)
-..+|.+-..|+..++++.-.-+....--|.-+++++.||.|+...+++++.+.+.|+++.-..+.. +. .+++|+
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~--~a---~e~iGi 137 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE--HA---DEIIGI 137 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch--hh---hhhhhH
Confidence 3456777777888888888888888888999999999999999999999999999998887654322 22 358898
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCCCeeeehhhhhHHHHHHHHHHhhhhhcccCCCCCCchhhhhhhHHhhhc
Q 012821 273 LLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIYLRDGAACFLN 352 (456)
Q Consensus 273 lLiilS~i~~A~~~V~eEk~fk~y~~~~k~~~~lf~~~g~~g~fq~i~~~lllP~~~~~~g~~~~~~~~~l~dg~~cf~g 352 (456)
..-+.|...+|+--|...++.....- ++...| .+--|+|.+.+.. +-|......|++. +...-...+.|+.
T Consensus 138 ~~AV~SA~~aAlYKV~FK~~iGnAn~---Gdaa~F--mS~LGF~NL~~~~-~~~lIL~~T~VE~--~qsFA~~PWG~l~- 208 (290)
T KOG4314|consen 138 ACAVGSAFMAALYKVLFKMFIGNANF---GDAAHF--MSCLGFFNLCFIS-FPALILAFTGVEH--LQSFAAAPWGCLC- 208 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcc---hhHHHH--HHHHHHHHHHHHh-hhHHHHHHhchHH--HHHHhhCCchhhh-
Confidence 88888888888877777666644210 122222 2344555443322 1122222333221 1001111122222
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHH
Q 012821 353 LGTLSSGCDGAPLLPLLFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVIL 432 (456)
Q Consensus 353 ~~~~~~~c~ga~ll~~lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vil 432 (456)
|+ ..+.+.+|+..|+-... ..-++-++-+.+.+|.-.. ..+.+ ++..+..++++|.+++
T Consensus 209 ---------G~---A~L~lAFN~~iN~GiaL----~~PilISiG~l~~iP~Naa-iDiL~----q~l~~ntl~La~T~iI 267 (290)
T KOG4314|consen 209 ---------GA---AGLSLAFNFLINFGIAL----LNPILISIGMLCGIPGNAA-IDILF----QELEFNTLFLAATCII 267 (290)
T ss_pred ---------hH---HHHHHHHhhheeehhhh----hchhhheehheecCcchhH-HHHHH----HHHHHHHHHHHHHHHH
Confidence 21 12344445544443322 2233333333333443221 12222 2223566889999999
Q ss_pred HHhhhhccCCCCC
Q 012821 433 VMGLLIYSWTPTA 445 (456)
Q Consensus 433 v~G~liYn~~~~~ 445 (456)
.+|.++--.+.++
T Consensus 268 ~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 268 CIGFILIIIPEDK 280 (290)
T ss_pred HHhHHheecccch
Confidence 9998887665444
No 41
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.35 E-value=0.025 Score=57.65 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=62.4
Q ss_pred hHHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCCC
Q 012821 187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP 260 (456)
Q Consensus 187 ~i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~~ 260 (456)
+..|++ -.++...++.|+.+-|+++..-|....++.+++++..|||+|++..-.+||+++++|-.+.+...+.+
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 344554 45677777888899999999999999999999999999999999999999999999977766544433
No 42
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.32 E-value=0.031 Score=56.37 Aligned_cols=135 Identities=19% Similarity=0.189 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccccc---ccCCC--chhhHHH
Q 012821 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM---LSMPK--APFVAVG 190 (456)
Q Consensus 116 ~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~---~~~p~--~~f~i~a 190 (456)
-+.++.+.+ ++.....+..|...++...+|+-+-..+++--++..+.....-. .++..+.. .+.|. ...++.+
T Consensus 155 G~~ll~~sl-~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSL-LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 444554444 44555556666666666667743333332222222222211101 11111100 11121 2223445
Q ss_pred HHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 191 llD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
++-.++....+.-....++....+....--+.|+++|+++.+++++..||+|++++..|+.+
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence 55555555555444567777778888888899999999999999999999999999999765
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.25 E-value=0.015 Score=57.79 Aligned_cols=65 Identities=28% Similarity=0.400 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
..+++..++..+.+.+..+.+++....+.....+++.+++++++|.+.+..|++|+.++++|+.+
T Consensus 216 ~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 216 LGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 44556777777888899999999989999999999999999999999999999999999999864
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.21 E-value=0.037 Score=57.63 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEec
Q 012821 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (456)
Q Consensus 195 l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~s 256 (456)
++-.+.+.+..+.+++.-.++.-..-++++++++++|+.+++..|++|++++++|+.++...
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 34444556777899999999999999999999999999999999999999999999887643
No 45
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.69 E-value=0.028 Score=49.19 Aligned_cols=70 Identities=14% Similarity=0.095 Sum_probs=62.4
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchhHH-HHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~-~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
|+|++|=++...++.+-+..+...+.|+- ++.+....++|++.++++.++..++..|+|+.+++.|+.++
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 67889999999999999999999998854 55579999999999998888888889999999999999875
No 46
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.59 E-value=0.036 Score=49.04 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=60.9
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
+++++...+..++-.+...++..+|.+ -+.+..+..++.+.+.+++|+|.+++..|++|+.++++|++..-.
T Consensus 31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 445666677777777777888888888 577778999999999999999999999999999999999987643
No 47
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=95.43 E-value=0.1 Score=52.50 Aligned_cols=71 Identities=20% Similarity=0.146 Sum_probs=63.6
Q ss_pred chhhHHHHHHHHHHHHHHHHhh-hcchhHHHHhcchhHHHHHHHHHHHhcCcccchhh----hHHHHHhhheeeEE
Q 012821 184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITV 254 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~-~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~----lGv~lVi~Gviivv 254 (456)
+..++.|.+..++..+.+.+.. +.+.+...++.+.-.+.+.+++++++|++.++.|+ +|+++++.|+++..
T Consensus 212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 4456688888888888888888 99999999999999999999999999999999999 99999999987754
No 48
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.33 E-value=0.17 Score=48.40 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 186 f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
.+.+.++-+++..+......+.+.....+....-++++.++|+++.+++++..||+|+.+|+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3455666777777777777888888888999999999999999999999999999999999999764
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=95.11 E-value=0.25 Score=51.06 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
..+++..+.|...+.+...+++..+.+.....-+++.++|+++++.+.+..|++|++++++|+.+
T Consensus 281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 34556666666666788899999999999999999999999999999999999999999999865
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.08 E-value=0.24 Score=49.56 Aligned_cols=68 Identities=21% Similarity=0.144 Sum_probs=58.0
Q ss_pred HHHHH-HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 188 AVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 188 i~all-D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
..|.+ -.++-.+.+.+..+++++...++.....+++.++++++++.+++..|++|+.++++|++....
T Consensus 213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 34444 445555667889999999999999999999999999999999999999999999999877643
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=94.81 E-value=0.3 Score=48.98 Aligned_cols=68 Identities=12% Similarity=-0.019 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
..++.-.++-.+.+.++.+++++...++.-...++++++++++++.+++..|++|++++++|+.+...
T Consensus 220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 34444555566667888999999999999999999999999999999999999999999999877543
No 52
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=94.58 E-value=0.14 Score=51.35 Aligned_cols=62 Identities=19% Similarity=0.182 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
....+.+.+.+..++++....++....-++++++++++++.+.+..|++|..++++|+.+..
T Consensus 231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 33344455567889999999999888888888999999999999999999999999987753
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.54 E-value=0.57 Score=41.89 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHH--HhcCcccchhhhHHHHHhhheeeEEe
Q 012821 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 190 allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~i--FLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
-.+..++..+-..++...|.+.-.-+.....+++++.++. ++|.+.+..||+|+.++++|++++..
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3456666667777777788775555545555667777774 89999999999999999999988653
No 54
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=94.46 E-value=0.5 Score=45.70 Aligned_cols=69 Identities=28% Similarity=0.402 Sum_probs=59.0
Q ss_pred hhHHHHHHH-HHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 186 FVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 186 f~i~allD~-l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
....+++-. ++..+.+.+....++....++.-..+++++++++++++.+++..|++|+.+++.|+.+..
T Consensus 217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 445566655 577777889999999999999988899999999999999999999999999999987653
No 55
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=94.44 E-value=0.13 Score=44.77 Aligned_cols=65 Identities=22% Similarity=0.201 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 190 GLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 190 allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
-.+..++-.+...++..+|.+ -+.+..+..++.+.+++++++|.+.+..|++|+.++++|++..-
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 333444444444556666666 56777888999999999999999999999999999999988763
No 56
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=94.32 E-value=0.62 Score=46.58 Aligned_cols=61 Identities=13% Similarity=0.014 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
-.++..+-+.+..+.+++...++.-...+++++++++++|.+++..|++|+++++.|+.+.
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 3455556667888999999999999999999999999999999999999999999998764
No 57
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=94.07 E-value=0.17 Score=44.07 Aligned_cols=67 Identities=12% Similarity=0.035 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 186 FVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 186 f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
..+...+..++-.+.-.+...+|.+ -+.+..+..+..+.+.++++.|.+.+..|++|+.++++|++.
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 3455556666666667777788877 688999999999999999999999999999999999999875
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=93.94 E-value=7.8 Score=39.02 Aligned_cols=146 Identities=16% Similarity=0.105 Sum_probs=93.6
Q ss_pred cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHh-cchh
Q 012821 141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPIL-SQTF 219 (456)
Q Consensus 141 ~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mL-rq~~ 219 (456)
+.+-+|.=|...|++|-.++-.....++ +. ..+. .....+.-++-|++-.+++..++.+..+...|.-+=+ .+.=
T Consensus 7 k~gG~~~~Q~lG~t~Gali~alv~~~~~-~p-~~~~--~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q 82 (269)
T PF06800_consen 7 KIGGKPANQILGTTIGALIFALVVFLFR-QP-AFSM--SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ 82 (269)
T ss_pred eeCCcHHHHHHHHHHHHHHHHHHHHHHh-CC-Ccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence 4566777788888888765544333332 11 1000 0012222357799999999999999988777744333 3556
Q ss_pred HHHHHHHHHHHhcCcccchhhh----HHHHHhhheeeEEecCCCCCCC-CCCcchHHHHHHHHHHHHHHHHHHHHH
Q 012821 220 LVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSNPGHS-LKGAGIFWSLLMIVSFLLQAADTVLKE 290 (456)
Q Consensus 220 Ip~T~llS~iFLkrRy~~~q~l----Gv~lVi~Gviivv~sg~~~~~s-~~~~~iig~lLiilS~i~~A~~~V~eE 290 (456)
++.+.++.+++++.--+..|++ +++++++|+++....+.+++++ ...+.--+.+..++|.+-+..-.+.-.
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999977766665 7788888988876654433321 122334566777788887776555533
No 59
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=93.71 E-value=1.1 Score=45.05 Aligned_cols=58 Identities=19% Similarity=0.116 Sum_probs=48.2
Q ss_pred HHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 198 ~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
.+.+.+..++++....++.....++++++++++|+.+++..|++|..++++|+.+...
T Consensus 230 ~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 230 GIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 3334556678887777777788888999999999999999999999999999887543
No 60
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.64 E-value=0.29 Score=47.83 Aligned_cols=128 Identities=14% Similarity=0.155 Sum_probs=82.4
Q ss_pred HHHHHHHhhhhHHHHHHHHhC-cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHH
Q 012821 120 AAAVTVLLGVGNRVLYKLALV-PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAA 198 (456)
Q Consensus 120 l~~~~v~~G~~N~V~~K~~~~-~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~ 198 (456)
..+.+......-|+.-|.... +.||--|.+....+..++.- .+++-+ .+-++-+.++. ++++++.++=..--.
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~-l~iLk~---l~~~~fR~t~a--K~WfpiSfLLv~MIy 83 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVG-LLILKF---LRLVEFRLTKA--KKWFPISFLLVVMIY 83 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHH-HHHHHH---HhHhheehhhh--hhhcCHHHHHHHHHH
Confidence 345555666667788886654 66777777666655555432 222211 11111111222 234455555443333
Q ss_pred HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
..-.++.|++.|++.++....|+..+..=+.|.|+|.+-.+.++-+++++.-++.
T Consensus 84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va 138 (309)
T COG5070 84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVA 138 (309)
T ss_pred hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHh
Confidence 3346678999999999999999999999999999999999999988877664443
No 61
>PRK11431 multidrug efflux system protein; Provisional
Probab=93.58 E-value=0.23 Score=42.95 Aligned_cols=67 Identities=16% Similarity=0.071 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeE
Q 012821 187 VAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviiv 253 (456)
++...+..++-.+...+...+|.+ -+.+..+..++.+.+.++++.|.+.+..|++|+.++++|++..
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 444555666666666777777777 6889999999999999999999999999999999999998764
No 62
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=93.49 E-value=1.3 Score=44.38 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 188 i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
..+..-.++..+.+.++.+.+++.-.++.-...+++.++++++++.+++..|++|+.++++|+.+...
T Consensus 218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34556667777778888999999999999999999999999999999999999999999988777654
No 63
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=92.98 E-value=0.37 Score=41.77 Aligned_cols=69 Identities=19% Similarity=0.127 Sum_probs=56.3
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
++..+...+...+=.+.-.+...+|.+ -+.+..+..++-|.+.+++++|.+.+..+++|+.++++|++.
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~ 100 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIG 100 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHH
Confidence 344555555555555566677777776 688999999999999999999999999999999999999875
No 64
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=92.47 E-value=0.86 Score=45.79 Aligned_cols=70 Identities=21% Similarity=0.198 Sum_probs=58.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhh----hHHHHHhhheee
Q 012821 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVII 252 (456)
Q Consensus 183 ~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~----lGv~lVi~Gvii 252 (456)
.|+=.+.|++..++|..++++....-...--.|.|..++++.+.+.++||.+=+++|+ +|++++++|.++
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 3556899999999999999999998888888899999999999999999987666655 466667666543
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=91.43 E-value=5.4 Score=40.48 Aligned_cols=77 Identities=21% Similarity=0.092 Sum_probs=50.3
Q ss_pred ccCCCch-hhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhH-HHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 179 LSMPKAP-FVAVGLLEALAAATGMAAGAILSGASIPILSQTFL-VWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 179 ~~~p~~~-f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~I-p~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
++.|+.. .+..+.+++..|...|+-..+-.-.+-.=|.=..- .+..++..+|||.|+++.||+++.+..+||.+-..
T Consensus 66 ~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 66 LKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 4455433 34567777887877775443321111111222223 35667899999999999999999999999987543
No 66
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=90.97 E-value=0.78 Score=38.43 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHH
Q 012821 189 VGLLEALAAATGMAAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (456)
Q Consensus 189 ~allD~l~~~L~~ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lV 246 (456)
.-.+..++-.+...++.++|.+ .+.+..+..++.+.+.++++.|.+.+..|++|+.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3335666666666778888887 578999999999999999999999999999998764
No 67
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=90.45 E-value=5 Score=39.60 Aligned_cols=129 Identities=14% Similarity=0.064 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccccc--ccCCCchhhHHHHH
Q 012821 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFVAVGLL 192 (456)
Q Consensus 115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~--~~~p~~~f~i~all 192 (456)
+-+...++..++.|......-|.+-++. .-.|.|+..+.+.=+++.+.....+. .+.+.++. ....++ .+++-++
T Consensus 114 ~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~~~g~f~G~~~~-~~~~i~~ 190 (244)
T PF04142_consen 114 LGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSD-GSAISESGFFHGYSWW-VWIVIFL 190 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhccc-ccccccCCchhhcchH-HHHHHHH
Confidence 3344444555666777777777766654 55777777762222222222222221 11222221 112222 3456678
Q ss_pred HHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHH
Q 012821 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (456)
Q Consensus 193 D~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lV 246 (456)
-++++.+.-+-.-|.+.-.--.-....++.|.++|+.+.+.+++....+|+.+|
T Consensus 191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 888888887778888877777777888999999999999999999999998764
No 68
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=89.91 E-value=1.1 Score=37.66 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhcc
Q 012821 372 LVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYS 440 (456)
Q Consensus 372 i~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn 440 (456)
+...+.+.+...-.|+.++...+...... |+...+++..+ .+| +.++.+++|.++++.|+++-+
T Consensus 62 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-pv~~~i~~~~~--~~e--~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 62 LGTALAYLLYFYALKYISASIVSILQYLS-PVFAAILGWLF--LGE--RPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cceehHHHHHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHH--cCC--CCCHHHHHHHHHHHHHHHHHH
Confidence 33456667777778999888888888766 55555555443 244 477889999999999998753
No 69
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=88.87 E-value=6.8 Score=35.28 Aligned_cols=117 Identities=21% Similarity=0.210 Sum_probs=65.9
Q ss_pred HHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHh
Q 012821 125 VLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAG 204 (456)
Q Consensus 125 v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~ 204 (456)
.+-+..|.-+.|... .|+.-+...+..=.++...+.....+. -.++..+.|||.|+ -|++-...-..+....
T Consensus 14 ~~q~~~N~~L~~~~g-----s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~v 85 (138)
T PF04657_consen 14 ALQAAFNGQLGKALG-----SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLGVFFVLSNIILV 85 (138)
T ss_pred HHHHHHHHHHHHHhC-----ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHHHHHHHHHHHHh
Confidence 334555665555433 366666554322222223332332222 12334567877665 7777777666777666
Q ss_pred hhcchhHHHHhcchhHHHHHHHHHHH--------hcCcccchhhhHHHHHhhheee
Q 012821 205 AILSGASIPILSQTFLVWQILLSIIF--------LGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 205 ~~ts~s~~~mLrq~~Ip~T~llS~iF--------LkrRy~~~q~lGv~lVi~Gvii 252 (456)
+.+.+.....+. +.=+++.|.++ -|++.+..+++|+.++++|+.+
T Consensus 86 p~lG~~~~~~l~---~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 86 PRLGAALTTILI---VAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hhhhHHHHHHHH---HHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 666665544332 22233333333 4789999999999999999763
No 70
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=86.96 E-value=9.9 Score=39.44 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=45.8
Q ss_pred HHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEec
Q 012821 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (456)
Q Consensus 199 L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~s 256 (456)
+.-+.+.++++....+=--+..|+++++.+++-|.++++..++|.+++++|+++--..
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 3334455666665555445679999999999999999999999999999999987543
No 71
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=85.54 E-value=1 Score=46.30 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
.+.+.|-...|...+.....+++-.++++....-.+..+.|+++++++.+..|.+|+++.++|+.+
T Consensus 239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 444566666677777777899999999999999988999999999999999999999999999765
No 72
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=85.31 E-value=9.5 Score=40.14 Aligned_cols=106 Identities=15% Similarity=0.232 Sum_probs=71.2
Q ss_pred HHHHHhhHHHHHHHHHHH-----HHHhcCCcccccccCCC-chhhHHHHHHHHHH----HHHHHHhhhcchhHHHHhcch
Q 012821 149 LAQLATFGYVAVYFSILY-----LRYHAGIVTDEMLSMPK-APFVAVGLLEALAA----ATGMAAGAILSGASIPILSQT 218 (456)
Q Consensus 149 ~~~~m~~~y~~v~f~il~-----~~~~~~~i~~e~~~~p~-~~f~i~allD~l~~----~L~~ia~~~ts~s~~~mLrq~ 218 (456)
+..-++|||+++|-.+++ .-.+.+ +|..+.|. .++..+-+-..+++ .+=..|...|++-+-.+=-..
T Consensus 277 vdi~lffGfvGLfnllllwP~l~iL~~~~---~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSl 353 (416)
T KOG2765|consen 277 VDIQLFFGFVGLFNLLLLWPPLIILDFFG---EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSL 353 (416)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhc---cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeE
Confidence 455577888777644322 223332 24445554 23322222223444 444567777887776666677
Q ss_pred hHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC
Q 012821 219 FLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (456)
Q Consensus 219 ~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg 257 (456)
.||..|+.=.++-+|.|+..+++|...+.+|.+++-.++
T Consensus 354 tIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 354 TIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred eeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 899999999999999999999999999999988886544
No 73
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=80.67 E-value=7.2 Score=38.75 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=56.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC
Q 012821 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (456)
Q Consensus 183 ~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg 257 (456)
+|...+.|.+..++....+.-..+-.+-.-.+....-=.||.+.|+++.+..++..||+|..+|..|+..-+..|
T Consensus 241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 355678899999998888755544443333344444457899999999999999999999999999988755443
No 74
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=79.33 E-value=3.3 Score=41.38 Aligned_cols=54 Identities=20% Similarity=0.110 Sum_probs=48.4
Q ss_pred HHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhhee
Q 012821 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (456)
Q Consensus 198 ~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvi 251 (456)
.+-++++..+|.+.+.+|-..--.+-++..++||+.+++..||+|+..++++.+
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 344689999999999999999888889999999999999999999999987754
No 75
>PRK13499 rhamnose-proton symporter; Provisional
Probab=79.16 E-value=87 Score=32.76 Aligned_cols=100 Identities=19% Similarity=0.037 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhcchhHHH-HhcchhHHHHHHHHHHHhcCc-------ccchhhhHHHHHhhheeeEEec--
Q 012821 187 VAVGLLEALAAATGMAAGAILSGASIP-ILSQTFLVWQILLSIIFLGRR-------YRVNQLFGCFLVGIGVIITVAS-- 256 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~ts~s~~~-mLrq~~Ip~T~llS~iFLkrR-------y~~~q~lGv~lVi~Gviivv~s-- 256 (456)
++-|++-.+++.+.+.+..++..+.-+ +--+..++.+.++..+++++= -...=.+|++++++|++++...
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 467889999999999999888888544 445667888899988887631 1133567889999999887542
Q ss_pred --CCCCCC--CCCCcchHHHHHHHHHHHHHHHHH
Q 012821 257 --GSNPGH--SLKGAGIFWSLLMIVSFLLQAADT 286 (456)
Q Consensus 257 --g~~~~~--s~~~~~iig~lLiilS~i~~A~~~ 286 (456)
+.+++. ..+.+.--|+++.++|.+.++.-+
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 211110 112244567888899999998887
No 76
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=73.59 E-value=43 Score=29.11 Aligned_cols=46 Identities=11% Similarity=0.116 Sum_probs=39.7
Q ss_pred HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEec
Q 012821 211 SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (456)
Q Consensus 211 ~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~s 256 (456)
.+.--.+..|..++++-+..=|+|+.++.|.|..++++|+.+.++.
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 5556667788899999999999999999999999999998887653
No 77
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=72.89 E-value=24 Score=33.76 Aligned_cols=60 Identities=10% Similarity=0.145 Sum_probs=33.2
Q ss_pred cccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHH---HHHHHHHHhcCcccc
Q 012821 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVW---QILLSIIFLGRRYRV 237 (456)
Q Consensus 178 ~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~---T~llS~iFLkrRy~~ 237 (456)
..+.++|+.++.+++-++.=...+.....+|..+.+.|....... .++....++||||+.
T Consensus 141 ~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 141 KKRPSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344566776666655555444444445556666666665443222 333445677888764
No 78
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=71.12 E-value=5.9 Score=34.51 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=59.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhhhcchhHH-HHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 182 PKAPFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 182 p~~~f~i~allD~l~~~L~~ia~~~ts~s~~-~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
-.|.|.+|=++.-+++.+-|.-+..+|.++- ++-+...+.||+++....=.+...+.-++|..+++.|+.+.+
T Consensus 51 l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 51 LNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 3478899999999999999988888888854 455566899999999987777777888899999998876643
No 79
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=70.46 E-value=72 Score=33.34 Aligned_cols=136 Identities=14% Similarity=0.111 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHH-HHHhcCCcccccccC-CC-chhhHHHH
Q 012821 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILY-LRYHAGIVTDEMLSM-PK-APFVAVGL 191 (456)
Q Consensus 115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~-~~~~~~~i~~e~~~~-p~-~~f~i~al 191 (456)
.-.......+++.|-+..-+-|+.-+. ..--|.++..|.+ +...|..+. .......+. +..-+ .+ +.-+++.+
T Consensus 183 ~G~~avl~~c~~SgfAgvYfEkiLK~s-~~s~wi~NiqL~~--~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl 258 (345)
T KOG2234|consen 183 LGLVAVLVACFLSGFAGVYFEKILKGS-NVSLWIRNIQLYF--FGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVL 258 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHH--HHHHHHHHHHhhccccccc-cCCccccccHHHHHHHH
Confidence 444555566667777777777766443 3557888888721 233333322 121111111 11011 11 22356777
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEE
Q 012821 192 LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 192 lD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv 254 (456)
..+.++.+.-+-.-|.+.-.--.-.+..|++|.+.|+.+.+++++..=.+|+.+|+..+.+-.
T Consensus 259 ~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 259 LNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 888888887766677777766666677899999999999999999999999999988766643
No 80
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=70.03 E-value=41 Score=29.28 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=41.3
Q ss_pred hhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 209 ~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
+=++.-=.+..|+.++++.+.+=|+|+.++.++|..++++|+.+.+.
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 33666667888999999999999999999999999999999888764
No 81
>PRK13499 rhamnose-proton symporter; Provisional
Probab=69.78 E-value=91 Score=32.60 Aligned_cols=67 Identities=13% Similarity=0.064 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhc----chhHHHHhcchhHHHHHHHHHHHhcCc------ccchhhhHHHHHhhheeeEE
Q 012821 187 VAVGLLEALAAATGMAAGAIL----SGASIPILSQTFLVWQILLSIIFLGRR------YRVNQLFGCFLVGIGVIITV 254 (456)
Q Consensus 187 ~i~allD~l~~~L~~ia~~~t----s~s~~~mLrq~~Ip~T~llS~iFLkrR------y~~~q~lGv~lVi~Gviivv 254 (456)
++.|++-.+++....++.... +.+++.+-.|+.+++..+...+ ||.+ -.+.-++|++++++|.+++.
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 678889999999998888655 3446777779999999999995 7643 33555677777777766544
No 82
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.05 E-value=81 Score=29.11 Aligned_cols=103 Identities=14% Similarity=0.236 Sum_probs=52.8
Q ss_pred CChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhh--HHHHHHHHHHHHHHHHhhhcchhHHHHhcchhH
Q 012821 143 KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFV--AVGLLEALAAATGMAAGAILSGASIPILSQTFL 220 (456)
Q Consensus 143 f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~--i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~I 220 (456)
-+.|+.-+...+..=..+...+.+.+....... ...+.|||.|. +.|.....++.+.+ +.+-+...+.+ .+
T Consensus 31 ~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~pwW~~~GG~lGa~~vt~s~~l~---p~lGa~~t~~l---~i 103 (150)
T COG3238 31 LGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASAPWWAWIGGLLGAIFVTSSILLA---PRLGAATTIAL---VI 103 (150)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCCchHHHHccchhhhhhhhhHHhc---cchhHHHHHHH---HH
Confidence 446777777765443334444444443322222 23456777663 33444444444333 33333322221 12
Q ss_pred HHHHHHHHHH--------hcCcccchhhhHHHHHhhheee
Q 012821 221 VWQILLSIIF--------LGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 221 p~T~llS~iF--------LkrRy~~~q~lGv~lVi~Gvii 252 (456)
.=+++.+.+. =+|+++..+++|++++++|+.+
T Consensus 104 ~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 104 AGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred HHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 2233333322 2689999999999999999544
No 83
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=63.56 E-value=33 Score=35.31 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=47.6
Q ss_pred chhhHHHHHHHHHHHHHHHHhhh---cchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 184 APFVAVGLLEALAAATGMAAGAI---LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~---ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
+-.++.+.|-+++....+.-... +.-......||. +++++|.+.-+++.+..||+|+.+|..|+..
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~---~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKM---VSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHH---HHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 33466777777777776644422 222344556664 7889999999999999999999999877655
No 84
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=63.52 E-value=10 Score=36.02 Aligned_cols=67 Identities=25% Similarity=0.380 Sum_probs=51.0
Q ss_pred hcCcccchhh-hHHHHHhhheeeEEecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH--HHHhhhhhhhhhcCCCCee
Q 012821 231 LGRRYRVNQL-FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL--KEVIFLDAAQRLKGGVDLF 307 (456)
Q Consensus 231 LkrRy~~~q~-lGv~lVi~Gviivv~sg~~~~~s~~~~~iig~lLiilS~i~~A~~~V~--eEk~fk~y~~~~k~~~~lf 307 (456)
|+|++..+.| +++.++.+|++.+.+++. .++|=++++++|++.|+|++= ||.+|.|- |+++.+=
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys~d---------~~~wK~fyv~~c~fva~~n~edwee~iFdK~----kg~V~lk 81 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYSSD---------SLLWKLFYVAGCLFVALQNMEDWEEAIFDKS----KGKVTLK 81 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeecCC---------chHHHHHHHHHHHHHHHhcchhhhheeEecc----CCEEEEE
Confidence 6788888888 567788888888777543 378899999999999999985 57777764 4456555
Q ss_pred eeh
Q 012821 308 VVN 310 (456)
Q Consensus 308 ~~~ 310 (456)
+.|
T Consensus 82 ~~n 84 (187)
T PF15169_consen 82 YFN 84 (187)
T ss_pred eee
Confidence 554
No 85
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=60.31 E-value=61 Score=28.87 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCCC
Q 012821 369 LFVLVNMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPTA 445 (456)
Q Consensus 369 lyii~ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~~ 445 (456)
+.+++..+..++-...+|+.......=..+.. +..+.+....+.++|| +.++.+++|.++++.|+++-+...++
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~-~~~v~~~~~~~~~~~E--~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLS-YALVYLAAMLLPWFNE--TFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH-HHHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 34444455455555566665544433222222 1111111110001244 48889999999999999998876665
No 86
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=60.15 E-value=66 Score=31.34 Aligned_cols=150 Identities=15% Similarity=0.142 Sum_probs=98.3
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhHHHHHHHHhC--cCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCccccc-ccCCC
Q 012821 107 ISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM-LSMPK 183 (456)
Q Consensus 107 ~~~~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~--~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~-~~~p~ 183 (456)
.+.|.+..|-=+..++.--.+...-+|++|+..- ..++-.-|.+..-++--|...+.-+ ..+.++-.+-+. -..||
T Consensus 126 ~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~l-IL~~T~VE~~qsFA~~PW 204 (290)
T KOG4314|consen 126 ADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPAL-ILAFTGVEHLQSFAAAPW 204 (290)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHH-HHHHhchHHHHHHhhCCc
Confidence 3455555555555555555555556777776654 3566666665554433344444322 223332211121 13466
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecC
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg 257 (456)
-...=++.+.+.-|.+.++|...+.+-+..+=.-..||-....-.+|-+-.++.....|..++.+|.++.+.+.
T Consensus 205 G~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 205 GCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 66677888888889999999988887776665556688888888888888888889999999999988887753
No 87
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=59.76 E-value=78 Score=29.50 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=47.6
Q ss_pred hhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHHHHHHHHHHHhhhc
Q 012821 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL 207 (456)
Q Consensus 128 G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~l~~~L~~ia~~~t 207 (456)
|.++++++=...-..++|.-+..|..++. .-++.-+.+.|.+.++...+.++.+++.......+-.++......-....
T Consensus 29 giis~~~y~~i~~~~~ly~~~~lq~~~~~-~~i~G~~~W~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 107 (181)
T PF04973_consen 29 GIISSLLYAYIFYQAGLYGDMLLQLFYFI-MSIYGWYQWKKGRDENDEVKVRRLSKKQWILLLIGILIGTAIFGFILKFL 107 (181)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHhhhccCcccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455555444445566655555554222 22222222222221111222244454444444444444444444334444
Q ss_pred chhHHHHhcchhHHHHHHHHHHHhcC
Q 012821 208 SGASIPILSQTFLVWQILLSIIFLGR 233 (456)
Q Consensus 208 s~s~~~mLrq~~Ip~T~llS~iFLkr 233 (456)
..+-.+.++....+.+.+-.++.-||
T Consensus 108 ~~~~~~~~Da~~~~~siva~~l~~~k 133 (181)
T PF04973_consen 108 TDSPFPWLDALTTVLSIVAQWLMARK 133 (181)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 44455777777666665555544444
No 88
>PRK02237 hypothetical protein; Provisional
Probab=58.87 E-value=1.3e+02 Score=26.43 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=40.5
Q ss_pred hhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEe
Q 012821 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (456)
Q Consensus 209 ~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~ 255 (456)
+=++.-=.+..|..++++.+..=|.|++++.++|+.++++|+.+.+.
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 33566667788999999999999999999999999999999877654
No 89
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=58.04 E-value=1.3e+02 Score=28.93 Aligned_cols=64 Identities=19% Similarity=0.164 Sum_probs=46.2
Q ss_pred cccccCCCchhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHH--HH-HHHhcCcccchh
Q 012821 176 DEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQIL--LS-IIFLGRRYRVNQ 239 (456)
Q Consensus 176 ~e~~~~p~~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~l--lS-~iFLkrRy~~~q 239 (456)
+..++-++||++..+.+-++-=...+++..++|.++..-|.-....+... +. -+.||||++...
T Consensus 154 d~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 154 DNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 44567788999888888888777888999999999988877654433222 22 345788887653
No 90
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=51.45 E-value=1.2e+02 Score=26.71 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=25.9
Q ss_pred CCCchhhHHHHHHHHHhhhhccCCCCCCCCCC
Q 012821 419 SSLPTGFVAGAVILVMGLLIYSWTPTASPSSA 450 (456)
Q Consensus 419 ~~~~~~~liG~vilv~G~liYn~~~~~~~~~~ 450 (456)
+++++.+++|..+++.|+++=|...++..+++
T Consensus 81 E~~s~~~~~gi~lIi~GVi~l~l~~~~~~~~~ 112 (120)
T PRK10452 81 ESLSLMKIAGLTTLVAGIVLIKSGTRKARKPE 112 (120)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhcCCCCCCccc
Confidence 35788999999999999999998776654443
No 91
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=45.94 E-value=37 Score=34.63 Aligned_cols=134 Identities=16% Similarity=0.077 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHHHHHhhHHHHHHHHHHHHHHhcCCcccccccCCCchhhHHHHHHH
Q 012821 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA 194 (456)
Q Consensus 115 ~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~~~m~~~y~~v~f~il~~~~~~~~i~~e~~~~p~~~f~i~allD~ 194 (456)
|.=+++-+.-=.+-.+|.|..|.-..+-.|--|-++..|++-.++.|.+.+....--+.+..- ...|-++|+++=.+..
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~-~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF-PHLPAIKFWILMTLSG 262 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc-ccchHHHHHHHHHHHH
Confidence 333333333334456799999988888899999999999988888888876543211111110 1233455655444443
Q ss_pred HHHHHHHHHh----hhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhh
Q 012821 195 LAAATGMAAG----AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIG 249 (456)
Q Consensus 195 l~~~L~~ia~----~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~G 249 (456)
+.+..+.+.- -.|++-.|.+=..+.-.-+-++.+.+++..-+...|-|.++|++|
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 3333333222 247777888877778888889999999998888889888777766
No 92
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=44.12 E-value=38 Score=29.49 Aligned_cols=64 Identities=19% Similarity=0.235 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHH-HHhhhcchhHHHHhcchh-HHHHHHHHHHHhcCcccchhhhHHHHHhhheee
Q 012821 189 VGLLEALAAATGM-AAGAILSGASIPILSQTF-LVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (456)
Q Consensus 189 ~allD~l~~~L~~-ia~~~ts~s~~~mLrq~~-Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvii 252 (456)
+|+++.+-.+-.+ +|....++.-..+++-.+ +..=+++|++++|.++++.|..|-+.++.++..
T Consensus 40 IAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 40 IAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 4556555444444 555544444444444432 344567899999999999999998887766544
No 93
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=39.28 E-value=1.7e+02 Score=25.21 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhh
Q 012821 374 NMGFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLI 438 (456)
Q Consensus 374 ni~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~li 438 (456)
.....++-...+|+.+.-...-.-++.. +.+.+.+..+ +|| +.++.+.+|.++++.|+++
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~-v~~~~~~~l~--f~E--~ls~~~~~Gi~lii~Gv~~ 106 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNF-VWVTLAAVKL--WHE--PVSPRHWCGVAFIIGGIVI 106 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHH-HHHHHHHHHH--hCC--CCCHHHHHHHHHHHHHHHH
Confidence 3445555566667665544444444332 2222222222 344 5888999999999999875
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=36.46 E-value=14 Score=36.93 Aligned_cols=59 Identities=20% Similarity=0.146 Sum_probs=44.1
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhH
Q 012821 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFG 242 (456)
Q Consensus 184 ~~f~i~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lG 242 (456)
|+-.+||+.-..+|..++.+........-=-|+|..++.+-+=..+|||.|=++.|+..
T Consensus 210 ~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~ 268 (288)
T COG4975 210 WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVY 268 (288)
T ss_pred HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhh
Confidence 44579999999999999998876555544455777777777777778887777777643
No 95
>KOG3392 consensus Exon-exon junction complex, Magoh component [RNA processing and modification]
Probab=35.88 E-value=20 Score=31.64 Aligned_cols=22 Identities=50% Similarity=0.777 Sum_probs=16.0
Q ss_pred eecCccccccCCCCCCCCchhh
Q 012821 49 FRSSKRNYYHNNSNYKNNNVIY 70 (456)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~ 70 (456)
+|+--.-.|.|||||||...++
T Consensus 27 fr~dg~lryannsnykndt~ir 48 (147)
T KOG3392|consen 27 FRPDGKLRYANNSNYKNDTMIR 48 (147)
T ss_pred ecCCCcEEeccCCCcccchhhh
Confidence 4554445689999999987654
No 96
>PF02792 Mago_nashi: Mago nashi protein; InterPro: IPR004023 This family was originally identified in drosophila and called mago nashi, it is a strict maternal effect, grandchildless-like, gene []. The human homologue has been shown to interact with an RNA binding protein, ribonucleoprotein rbm8 (Q9Y5S9 from SWISSPROT) []. An RNAi knockout of the Caenorhabditis elegans homologue causes masculinization of the germ line (Mog phenotype) hermaphrodites, suggesting it is involved in hermaphrodite germ-line sex determination [] but the protein is also found in hermaphrodites and other organisms without a sexual differentiation.; GO: 0005634 nucleus; PDB: 2XB2_Y 2J0S_C 3EX7_A 2J0Q_F 1P27_C 2HYI_A 2X1G_B 1HL6_B 1RK8_B 1OO0_A ....
Probab=34.58 E-value=15 Score=33.40 Aligned_cols=21 Identities=48% Similarity=0.741 Sum_probs=16.5
Q ss_pred EeecCccccccCCCCCCCCch
Q 012821 48 LFRSSKRNYYHNNSNYKNNNV 68 (456)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~ 68 (456)
=+|+..+-.|-|||||||.+.
T Consensus 22 Efr~dG~lRYaNnSnYknd~~ 42 (143)
T PF02792_consen 22 EFRPDGKLRYANNSNYKNDSM 42 (143)
T ss_dssp EEETTSEEEEEEEESCCCSEE
T ss_pred EeccCCeEEEcccCCCCCcce
Confidence 356666677899999999874
No 97
>PF12398 DUF3660: Receptor serine/threonine kinase ; InterPro: IPR022126 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00954 from PFAM, PF01453 from PFAM, PF00069 from PFAM, PF08276 from PFAM. There is a conserved ELPL sequence motif. ; GO: 0004674 protein serine/threonine kinase activity
Probab=33.78 E-value=29 Score=25.19 Aligned_cols=28 Identities=29% Similarity=0.235 Sum_probs=21.1
Q ss_pred ecccccccCCCCceeEeecCccccccCC
Q 012821 33 YLRDHHANQRLPTTLLFRSSKRNYYHNN 60 (456)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (456)
||...+-||-+|..=++-||||.+++.|
T Consensus 3 ~i~~~~RnQ~llmN~~v~sskr~~s~En 30 (42)
T PF12398_consen 3 PIVNRQRNQDLLMNGMVLSSKRQLSGEN 30 (42)
T ss_pred ccccccccccccccceEEeccccccccC
Confidence 4555677899987777779999887744
No 98
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=33.15 E-value=2.6e+02 Score=23.56 Aligned_cols=63 Identities=14% Similarity=0.295 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhhccCCCC
Q 012821 376 GFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLIYSWTPT 444 (456)
Q Consensus 376 ~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~liYn~~~~ 444 (456)
..+.....-.++.++.+. ...... |+...+.+-.+ ++| +.+...++|..+.+.|+++=++...
T Consensus 47 ~~~~~~~~a~~~~~~~v~-~i~~~~-pi~~~ll~~~~--~~e--r~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 47 VAYLLFFYALSYAPALVA-AIFSLS-PIFTALLSWLF--FKE--RLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHhCcHHHH-HHHHHH-HHHHHHHHHHH--hcC--CCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 455555566677775333 444443 44443333222 344 5788889999999999998776543
No 99
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.72 E-value=1e+02 Score=26.70 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHH-HHhhhcchhHHHHhcchh-HHHHHHHHHHHhcCcccchhhhHHHHHhhhee
Q 012821 190 GLLEALAAATGM-AAGAILSGASIPILSQTF-LVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (456)
Q Consensus 190 allD~l~~~L~~-ia~~~ts~s~~~mLrq~~-Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gvi 251 (456)
|+++.+-.+-.+ +|..-.++.-..+++..+ +.+=..+|+++||..+++.|+.|.++++.|+.
T Consensus 48 A~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~ 111 (116)
T COG3169 48 AFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVY 111 (116)
T ss_pred HHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 555554443333 555555555555555432 33345789999999999999999877776653
No 100
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=29.94 E-value=3.7e+02 Score=23.26 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=22.5
Q ss_pred CCCchhhHHHHHHHHHhhhhccCCCC
Q 012821 419 SSLPTGFVAGAVILVMGLLIYSWTPT 444 (456)
Q Consensus 419 ~~~~~~~liG~vilv~G~liYn~~~~ 444 (456)
++.++.+++|..+++.|+++=|...+
T Consensus 81 e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 81 QRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 34788999999999999999998665
No 101
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=29.67 E-value=22 Score=36.21 Aligned_cols=70 Identities=20% Similarity=0.244 Sum_probs=45.3
Q ss_pred cCCCchhhHH-HHHHHHHHHHHHHH---hhh--------cchhHHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHh
Q 012821 180 SMPKAPFVAV-GLLEALAAATGMAA---GAI--------LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVG 247 (456)
Q Consensus 180 ~~p~~~f~i~-allD~l~~~L~~ia---~~~--------ts~s~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi 247 (456)
..|..-+.+| ...|.+.|++.-.+ ..| +..++.--||- -+++++|.+..+-.++.+||+|+.+|.
T Consensus 230 ~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRK---FvSLl~SiiyF~Npft~~h~lGa~lVF 306 (330)
T KOG1583|consen 230 LIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRK---FVSLLFSIIYFENPFTPWHWLGAALVF 306 (330)
T ss_pred eccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHH---HHHHhheeeEecCCCCHHHHHHHHHHH
Confidence 3444444444 44577777765311 111 22223333343 368899999999999999999999999
Q ss_pred hheee
Q 012821 248 IGVII 252 (456)
Q Consensus 248 ~Gvii 252 (456)
.|-++
T Consensus 307 ~Gt~~ 311 (330)
T KOG1583|consen 307 FGTLL 311 (330)
T ss_pred HHHHH
Confidence 99665
No 102
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=28.95 E-value=5.6e+02 Score=26.01 Aligned_cols=29 Identities=24% Similarity=0.117 Sum_probs=26.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012821 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (456)
Q Consensus 268 ~iig~lLiilS~i~~A~~~V~eEk~fk~y 296 (456)
.++|.++-++|+++.+...++|++-.++-
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~ 33 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRL 33 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47899999999999999999999988764
No 103
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=28.74 E-value=3.6e+02 Score=26.96 Aligned_cols=70 Identities=17% Similarity=-0.013 Sum_probs=49.2
Q ss_pred chhhH-HHHHHHHHHHHHHHHhhhcchhHHHHhcchhHHHHHHHHHHH----hcC---cccchhhhHHHHHhhheeeE
Q 012821 184 APFVA-VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF----LGR---RYRVNQLFGCFLVGIGVIIT 253 (456)
Q Consensus 184 ~~f~i-~allD~l~~~L~~ia~~~ts~s~~~mLrq~~Ip~T~llS~iF----Lkr---Ry~~~q~lGv~lVi~Gviiv 253 (456)
+++++ -|++-+.+|.+.......+-..+-+++=++.-..+.-.+--| +++ +-....++|++++++|.++-
T Consensus 55 ~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f 132 (254)
T PF07857_consen 55 YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIF 132 (254)
T ss_pred eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhe
Confidence 45544 468899999999888888888887777777555555444323 333 34577889999999997764
No 104
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=28.04 E-value=5.4e+02 Score=24.64 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHhhhhhhhhhccccccccCCCCCCchhhHHHHHHHHHhhhh
Q 012821 376 GFNISLLHLLKISSAIVSSLASTFSVPISVYVFTLPLPYLGVASSLPTGFVAGAVILVMGLLI 438 (456)
Q Consensus 376 ~~N~~~~~v~K~~SA~~~~lv~svr~pLsi~~f~l~~~~~G~~~~~~~~~liG~vilv~G~li 438 (456)
..+.+-..-+++.++...++.... .|+-+.++.-.+ .+| +.+..+++|.++-+.|+++
T Consensus 82 ~~~~~~~~a~~~~~~~~a~~l~~~-~Pi~~~lla~~~--l~E--k~~~~~~l~~~~~~~Gv~l 139 (256)
T TIGR00688 82 FNWWLFIWAVNNGSSLEVSLGYLI-NPLVMVALGRVF--LKE--RISRFQFIAVIIATLGVIS 139 (256)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHH-HHHHHHHHHHHH--Hhc--CCCHHHHHHHHHHHHHHHH
Confidence 444555555677777777776554 466554444332 344 4777778788777778664
No 105
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=25.69 E-value=9.8e+02 Score=26.85 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=34.3
Q ss_pred ccccccCCceeeecccccCCCcchHHHHHHHHHHHhhhhHHHHHHHHhCcCCChhHHHH
Q 012821 92 VDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLA 150 (456)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~v~il~~~~v~~G~~N~V~~K~~~~~~f~yPff~~ 150 (456)
.+-|..|+.++|.. +.+--+..+...+....++.=..+.++.=...+-+.|.||=+.
T Consensus 107 ~SvR~~G~Si~~ia--~~~lG~~a~~~~~~~~l~iliiv~Avfa~vv~~~l~~~p~~~f 163 (575)
T COG1966 107 LSVRHGGKSIGEIA--GKYLGRTAKVFFLLLALILLILVGAVFAAVIAKLLANSPWGVF 163 (575)
T ss_pred eeeccCCccHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHH
Confidence 33466666666654 5566666666666665555555666665555555666777553
No 106
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=25.48 E-value=2.1e+02 Score=29.39 Aligned_cols=72 Identities=24% Similarity=0.317 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHH---HHhhhcchh-HHHHhcchhHHHHHHHHHHHhcCcccchhhhHHHHHhhheeeEEecCCC
Q 012821 188 AVGLLEALAAATGM---AAGAILSGA-SIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN 259 (456)
Q Consensus 188 i~allD~l~~~L~~---ia~~~ts~s-~~~mLrq~~Ip~T~llS~iFLkrRy~~~q~lGv~lVi~Gviivv~sg~~ 259 (456)
=.+++..+++.++. .++....+. +-.+....-=-.|.++|+++.-|.++.++.-|-++|++|+.+-++|..+
T Consensus 261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 34666666666654 222222222 2233333334578899999999999999999999999999998887643
No 107
>TIGR01528 NMN_trans_PnuC nicotinamide mononucleotide transporter PnuC. The PnuC protein of E. coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see TIGR01526). This model defines a region corresponding to most of the length of PnuC, found primarily in pathogens. The extreme N- and C-terminal regions are poorly conserved and not included in the alignment and model.
Probab=24.49 E-value=1.2e+02 Score=28.60 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=17.2
Q ss_pred HHHHhcchhHHHHHHHHHHHhcCc
Q 012821 211 SIPILSQTFLVWQILLSIIFLGRR 234 (456)
Q Consensus 211 ~~~mLrq~~Ip~T~llS~iFLkrR 234 (456)
..+.++......+.+-.++.-||+
T Consensus 114 ~~p~~Da~~t~~Siva~~l~~~k~ 137 (189)
T TIGR01528 114 NFPWLDSITFVIGIVAQILMVRRY 137 (189)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH
Confidence 457888888777777777666664
No 108
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=23.40 E-value=9.1e+02 Score=25.70 Aligned_cols=27 Identities=26% Similarity=0.137 Sum_probs=17.1
Q ss_pred HHHHhcCcccchh---hhHHHHHhhheeeE
Q 012821 227 SIIFLGRRYRVNQ---LFGCFLVGIGVIIT 253 (456)
Q Consensus 227 S~iFLkrRy~~~q---~lGv~lVi~Gviiv 253 (456)
=+.+|++|+...- +.+++...+|+++.
T Consensus 233 Vw~Llqprdyl~~~~L~~~~~~~~igli~~ 262 (376)
T PF02554_consen 233 VWKLLQPRDYLNGFLLIGMLIGLVIGLIIG 262 (376)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHheeec
Confidence 3567889987654 44555566666664
Done!