BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012826
(455 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/483 (45%), Positives = 298/483 (61%), Gaps = 53/483 (10%)
Query: 13 QAEPRNVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVA 72
Q +++ FP FVFG A++AYQ EGA +E RG +IWD F HT GKI D SN DVA
Sbjct: 6 QQSGGGLTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVA 65
Query: 73 VDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-- 130
VD YHR++EDI L+A +G DAYRFSI+WSRI+P+G+G ++N GI YN +IDALL K
Sbjct: 66 VDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNGVG-QVNQAGIDHYNKLIDALLAKGI 124
Query: 131 -----------------------------------DTCFASFGDRVKNWITINEPLQTAV 155
+TCF FGDRVK+WIT+NEP A+
Sbjct: 125 QPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAI 184
Query: 156 NGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNI 205
GY G+ APGR +S TEPY+VAHH ILAHAAA S+Y+ KYK Q G +
Sbjct: 185 QGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQL 244
Query: 206 GLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQK 265
G+ D W E S+ D AA R +FQ+GW+ P ++GDYP MR +G++LP+F
Sbjct: 245 GIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTAD 304
Query: 266 DKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYE---AQEMERLVEWEGGEVIGEKAA 322
+ +V+ +LDFVG+NHYT+ + H + G+ A + ++ G+ IG++A
Sbjct: 305 EAAVVKGALDFVGINHYTTYYTRH-NNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRAN 363
Query: 323 SEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGY 382
S WLY+VP G+R ++NY+ + YN+PP+Y+TENGMDD N + + L D R++Y Y
Sbjct: 364 SIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDY 423
Query: 383 LSAVAQAIK-DGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 441
L+ +A +IK DG DVRGYF WSLLDN+EWA GY+ RFGL +VDYK+ L R+PK+S WF
Sbjct: 424 LTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 483
Query: 442 RFL 444
L
Sbjct: 484 ALL 486
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/469 (46%), Positives = 287/469 (61%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +TENGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITENGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 287/469 (61%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T N+P A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +TENGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITENGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 286/469 (60%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITSNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 286/469 (60%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITANGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 286/469 (60%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 286/469 (60%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/469 (45%), Positives = 286/469 (60%), Gaps = 47/469 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQK
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 131 -----------------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTG 161
D CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 162 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 215
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 216 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 275
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/483 (44%), Positives = 281/483 (58%), Gaps = 49/483 (10%)
Query: 11 YEQAEPRNVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
Y A VS+ FP F+FG A+S+YQ EG EG RG SIWD FTH KI D+SNG
Sbjct: 21 YNSAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNG 80
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALL 128
DVA D YH YKED+ L+ +G DAYRFSISW+RI P+G L +N EGI +YNN+I+ LL
Sbjct: 81 DVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELL 140
Query: 129 QK-------------------------------------DTCFASFGDRVKNWITINEPL 151
K + CF FGDRVKNWIT NEP
Sbjct: 141 SKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPW 200
Query: 152 QTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 201
NGY TG+FAPGR S EPY HHQ+LAHA +Y+ KY+ Q
Sbjct: 201 TFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQ 260
Query: 202 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 261
G IG+ + W S + AA R +DF GW++ P+ GDYP MR +G++LP+
Sbjct: 261 KGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQ 320
Query: 262 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA 321
F ++ +LV+ + DF+GLN+YT+ + + S + Y L G IG +A
Sbjct: 321 FTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQA 380
Query: 322 ASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKG 381
AS WLYV P G R +L Y+ + Y NP +Y+TENG+D+ N + PL E L D R+ Y+
Sbjct: 381 ASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHK 440
Query: 382 YLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 441
+L ++ AI+DGA+V+GYF WSLLDNFEW+ GYT RFG+ +VDY +G R+PK+SA+WF
Sbjct: 441 HLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFK 500
Query: 442 RFL 444
+FL
Sbjct: 501 KFL 503
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 289/492 (58%), Gaps = 69/492 (14%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQK------ 130
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 131 -------------------------------DTCFASFGDRVKNWITINEPLQTAVNGYC 159
+ CF FGDRVK+W+T+NEP +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYA 196
Query: 160 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 192
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 193 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 251
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 252 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 310
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 311 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 369
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 370 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 429
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 430 VRHPKSSAYWFM 441
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/476 (43%), Positives = 277/476 (58%), Gaps = 49/476 (10%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSNGDVAVDHY 76
+++++ F P FVFG A+SA+Q EGA E +G SIWD FTH KI D++NGDVA+D Y
Sbjct: 13 DLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEY 72
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQK----- 130
HRYKEDI ++ + DAYRFSISW R+ P G L +N EGI +YNN+I+ +L
Sbjct: 73 HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPY 132
Query: 131 --------------------------------DTCFASFGDRVKNWITINEPLQTAVNGY 158
+ CF FGDRVK+WIT+NEP ++N Y
Sbjct: 133 VTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAY 192
Query: 159 CTGIFAPGRHQH----------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLV 208
G FAPGR S EPYL AH+Q+LAHAAA +Y+ KY+ Q G IG+
Sbjct: 193 AYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGIT 252
Query: 209 VDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKE 268
+ W E S + D AA R LDF +GW++HP+ G YPE MR + +LPKF ++ +
Sbjct: 253 LVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESK 312
Query: 269 LVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYV 328
+ S DF+GLN+Y+S + A A + P + + G+ +G AAS WL +
Sbjct: 313 ELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCI 372
Query: 329 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 388
P G+RK+L Y+ YNNP IY+TENG ++ + + L E L D R+ Y+ +L V
Sbjct: 373 YPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLT 432
Query: 389 AIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
AI DG +V+GYF WSL DN EW GYT RFGLV+VD+KN L RHPK SA+WF FL
Sbjct: 433 AIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFL 488
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 289/492 (58%), Gaps = 69/492 (14%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQK------ 130
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 131 -------------------------------DTCFASFGDRVKNWITINEPLQTAVNGYC 159
+ CF FGDRVK+W+T+NEP +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYA 196
Query: 160 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 192
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 193 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 251
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 252 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 310
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 311 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 369
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 370 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 429
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 430 VRHPKSSAYWFM 441
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 289/492 (58%), Gaps = 69/492 (14%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQK------ 130
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 131 -------------------------------DTCFASFGDRVKNWITINEPLQTAVNGYC 159
+ CF FGDRVK+W+T+N+P +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYA 196
Query: 160 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 192
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 193 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 251
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 252 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 310
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 311 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 369
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 370 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 429
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 430 VRHPKSSAYWFM 441
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/470 (41%), Positives = 266/470 (56%), Gaps = 45/470 (9%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVDHYH 77
V + DFP +F+FG SAYQ EGA EGNRG SIWD FT + KI D SNG+ A++ YH
Sbjct: 38 VHRRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYH 97
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQK------ 130
YKEDI ++ + G ++YRFSISWSR+ P G L +N +G+ FY++ ID LL
Sbjct: 98 MYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSV 157
Query: 131 -------------------------------DTCFASFGDRVKNWITINEPLQTAVNGYC 159
+ CF FGD++K W T NEP AVNGY
Sbjct: 158 TLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYA 217
Query: 160 TGIFAPGR-----HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWA 214
G FAPGR + EPY+V H+ +LAH AA Y+ K++ Q G IG+V++ W
Sbjct: 218 LGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWM 277
Query: 215 EANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSL 274
E SD D A R LDF +GW+L P+ GDYP+ MR + +LPKF D E ++
Sbjct: 278 EPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCY 337
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 334
DF+G+N+YT+ ++ +A KS E YE + + IG W +VVPWGL
Sbjct: 338 DFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLY 397
Query: 335 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGA 394
K+L Y +TY+ P +YVTE+GM +E L E D R Y + +L++V AI DG
Sbjct: 398 KLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGV 457
Query: 395 DVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
+V+GYFVWS DNFEW GY R+G+++VDYK+ R+PK SA W+ F+
Sbjct: 458 NVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKS-FERYPKESAIWYKNFI 506
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/463 (44%), Positives = 273/463 (58%), Gaps = 55/463 (11%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++GVAT++YQIEG+ G SIW F+HT G + + GDVA DHY+
Sbjct: 9 NVKK--FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYN 66
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD------ 131
R+KEDI++I KLG AYRFSISW RI P+G G ++N +G+ FYN IID LL+K
Sbjct: 67 RWKEDIEIIEKLGVKAYRFSISWPRILPEGTG-RVNQKGLDFYNRIIDTLLEKGITPFVT 125
Query: 132 ------------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTG 161
F +FGDRVKNWIT NEPL +A+ GY +G
Sbjct: 126 IFHWDLPFALQLKGGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSG 185
Query: 162 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEA-NSDK 220
FAPGR S++EP+ V H+ ++AH A V++ KD G IG+V++ ++ ++
Sbjct: 186 TFAPGRQ--STSEPWTVGHNILVAHGRAVKVFRETVKD---GKIGIVLNGDFTYPWDAAD 240
Query: 221 IEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLN 280
DK AA RRL+F W+ PIY GDYP MR LGD+LP F +++ LV S DF G+N
Sbjct: 241 PADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMN 300
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
HYTS +I H +S + ++ L + G IG + A WL G R L +I
Sbjct: 301 HYTSNYIRH--RSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVWI 358
Query: 341 AKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DGADVR 397
+K Y PPIYVTENG DD ++ +H D+ R+ Y K Y+ A+ A++ DG +V+
Sbjct: 359 SKRYGYPPIYVTENGAAFDDVVSEDGRVH----DQNRIDYLKAYIGAMVTAVELDGVNVK 414
Query: 398 GYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
GYFVWSLLDNFEWA+GY+KRFG+VYVDY R K S YW+
Sbjct: 415 GYFVWSLLDNFEWAEGYSKRFGIVYVDYST-QKRIVKDSGYWY 456
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 264/484 (54%), Gaps = 53/484 (10%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI PDG G K+N GI +YN +I++L+
Sbjct: 120 GDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTG-KVNQAGIDYYNKLINSLI 178
Query: 129 QKD-------------------------------------TCFASFGDRVKNWITINEPL 151
D CF +FGDRVKNW T NEP
Sbjct: 179 DNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPH 238
Query: 152 QTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 201
Y GI APGR S EPY HH +LAHA A +++ +Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHG 298
Query: 202 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 261
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 262 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 319
F ++++E + +S D +GLN+YTSRF H SP+ + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 320 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 379
+ W+Y+ P GL +L + + Y NPP+++TENG+ D E D S + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYL 477
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
+ ++SAV AI GADVRG+F W L+DNFEW+ GY+ RFGLVY+D +G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKW 537
Query: 440 FMRF 443
F +F
Sbjct: 538 FSKF 541
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 353 bits (907), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/484 (40%), Positives = 263/484 (54%), Gaps = 53/484 (10%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI PDG G K+N GI +YN +I++L+
Sbjct: 120 GDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTG-KVNQAGIDYYNKLINSLI 178
Query: 129 QKD-------------------------------------TCFASFGDRVKNWITINEPL 151
D CF +FGDRVKNW T N P
Sbjct: 179 DNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPH 238
Query: 152 QTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 201
Y GI APGR S EPY HH +LAHA A +++ +Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHG 298
Query: 202 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 261
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 262 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 319
F ++++E + +S D +GLN+YTSRF H SP+ + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 320 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 379
+ W+Y+ P GL +L + + Y NPP+++TENG+ D E D S + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYL 477
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
+ ++SAV AI GADVRG+F W L+DNFEW+ GY+ RFGLVY+D +G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKW 537
Query: 440 FMRF 443
F +F
Sbjct: 538 FSKF 541
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 351 bits (901), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 262/483 (54%), Gaps = 53/483 (10%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN +G+ +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLE 183
Query: 130 K-----------DT--------------------------CFASFGDRVKNWITINEPLQ 152
DT CF FG VKNW+T N+P
Sbjct: 184 NGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPET 243
Query: 153 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 202
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 203 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 262
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 263 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 320
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 321 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 380
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 381 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 441 MRF 443
F
Sbjct: 543 QEF 545
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 351 bits (900), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 194/484 (40%), Positives = 263/484 (54%), Gaps = 53/484 (10%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI P+G G K N +GI +YNN+I++L+
Sbjct: 120 GDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNGTG-KPNQKGIDYYNNLINSLI 178
Query: 129 Q-------------------------------------KDTCFASFGDRVKNWITINEPL 151
+ + CF SFGDRVKNW T NEP
Sbjct: 179 RHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPH 238
Query: 152 QTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 201
Y GI APGR S EPY HH +LAHA A +++ Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHG 298
Query: 202 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 261
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 262 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 319
F ++++E + +S D +GLN+YTSRF H S + + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSETTGSDGNEIGP 418
Query: 320 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 379
+ W+Y+ P GL +L + + Y NPPI++TENG+ D E D + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPE-MPDPLDDWKRLDYL 477
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
+ ++SAV AI GADVRG+F W L+DNFEW GY+ RFGLVY+D ++G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKW 537
Query: 440 FMRF 443
F +F
Sbjct: 538 FAKF 541
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 351 bits (900), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 262/483 (54%), Gaps = 53/483 (10%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN + + +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLE 183
Query: 130 -------------------------------KD------TCFASFGDRVKNWITINEPLQ 152
KD CF FG +VKNW+T NEP
Sbjct: 184 NGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPET 243
Query: 153 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 202
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 203 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 262
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 263 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 320
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 321 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 380
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 381 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 441 MRF 443
F
Sbjct: 543 QEF 545
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 261/483 (54%), Gaps = 53/483 (10%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN + + +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLE 183
Query: 130 K-----------DT--------------------------CFASFGDRVKNWITINEPLQ 152
DT CF FG VKNW+T NEP
Sbjct: 184 NGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPET 243
Query: 153 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 202
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 203 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 262
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 263 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 320
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 321 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 380
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 381 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 441 MRF 443
F
Sbjct: 543 QEF 545
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/466 (40%), Positives = 264/466 (56%), Gaps = 50/466 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S P +FV+G AT+AYQIEG+ ++ R SIWD F GKI D S+GDVA D Y+R
Sbjct: 4 MSAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNR 63
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKDT----- 132
++ED+ L+ G AYRFS+SWSRI P G +N GI Y +I+ L+++
Sbjct: 64 WREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVT 123
Query: 133 ---------------------------------CFASFGDRVKNWITINEPLQTAVNGYC 159
CF SFGD V+NWIT NEP +V GY
Sbjct: 124 LYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYG 183
Query: 160 TGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSD 219
GIFAPG S+TEP++V+HH ILAHA A +Y+ ++K+KQGG IG+ +D W D
Sbjct: 184 NGIFAPG--HVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDD 241
Query: 220 KIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 279
K A R ++F++G + +PIY G+YP ++ LGD+LP+F ++ ELV+ S DF GL
Sbjct: 242 TDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFFGL 301
Query: 280 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNY 339
N YT+ + S E F + G +G ++ WL G R +LNY
Sbjct: 302 NTYTTHLVQDG-GSDELAGFVKTGHTR-----ADGTQLGTQSDMGWLQTYGPGFRWLLNY 355
Query: 340 IAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAI-KDGADVRG 398
+ K Y+ P+YVTENG + + P+ + +DD R Y++ Y A+ QA+ +DGADVRG
Sbjct: 356 LWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRG 414
Query: 399 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
YF WSLLDNFEWA+GY RFG+ +VDY+ R PK SA + R+
Sbjct: 415 YFGWSLLDNFEWAEGYKVRFGVTHVDYET-QKRTPKKSAEFLSRWF 459
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/455 (41%), Positives = 254/455 (55%), Gaps = 45/455 (9%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
P +F +G AT+AYQIEGA ++ RG SIWD F GKI D S+G A D Y+R EDI
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 84 DLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKDTC--------- 133
L+ LG +YRFSISWSRI P+G G +N GI Y +D LL
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 134 ---------------------FASFG-------DRVKNWITINEPLQTAVNGYCTGIFAP 165
F ++ +V+NWIT NEPL +A+ GY +G FAP
Sbjct: 129 LPEGLHQRYGGLLNRTEFPLDFENYARVMFRALPKVRNWITFNEPLCSAIPGYGSGTFAP 188
Query: 166 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG-GNIGLVVDCEWAEA-NSDKIED 223
GR S++EP+ V H+ ++AH A Y+ +K G G IG+V++ ++ ++ D
Sbjct: 189 GRQ--STSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAADPAD 246
Query: 224 KSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYT 283
K AA RRL+F W+ PIY GDYP MR LGD+LP F +++ LV S DF G+NHYT
Sbjct: 247 KEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMNHYT 306
Query: 284 SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKT 343
S +I H +S + ++ L + G IG + S WL G R L +I+K
Sbjct: 307 SNYIRH--RSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRDFLVWISKR 364
Query: 344 YNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DGADVRGYFVW 402
Y PPIYVTENG + P ++L+D RV+Y+ Y+ A+ A++ DG +V+GYF W
Sbjct: 365 YGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFAW 424
Query: 403 SLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSA 437
SL+DNFEWA GY RFG+ YVDY+NG R PK SA
Sbjct: 425 SLMDNFEWADGYVTRFGVTYVDYENGQKRFPKKSA 459
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 254/489 (51%), Gaps = 58/489 (11%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QK----------------------------------------DTCFASFGDRVKNWITIN 148
+ CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 149 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 198
EP Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 EPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 199 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 258
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 259 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 316
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 317 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 374
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 375 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 434
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 435 SSAYWFMRF 443
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 254/489 (51%), Gaps = 58/489 (11%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 6 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 65
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 66 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 125
Query: 129 QK----------------------------------------DTCFASFGDRVKNWITIN 148
+ CF +FGD+VKNW+T N
Sbjct: 126 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 185
Query: 149 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 198
EP Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 186 EPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 245
Query: 199 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 258
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 246 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 304
Query: 259 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 316
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 305 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 364
Query: 317 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 374
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 365 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 424
Query: 375 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 434
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 425 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 484
Query: 435 SSAYWFMRF 443
SA W F
Sbjct: 485 ESAKWLKEF 493
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 254/489 (51%), Gaps = 58/489 (11%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QK----------------------------------------DTCFASFGDRVKNWITIN 148
+ CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 149 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 198
+P Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 DPQTFTSVSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 199 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 258
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 259 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 316
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 317 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 374
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 375 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 434
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 435 SSAYWFMRF 443
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 254/489 (51%), Gaps = 58/489 (11%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QK----------------------------------------DTCFASFGDRVKNWITIN 148
+ CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 149 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 198
+P Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 DPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 199 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 258
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 259 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 316
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 317 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 374
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 375 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 434
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 435 SSAYWFMRF 443
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/462 (38%), Positives = 251/462 (54%), Gaps = 67/462 (14%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++GVAT++YQIEG+ G SIW F+HT G + + GDVA DHY+
Sbjct: 24 NVKK--FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYN 81
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD------ 131
R+KEDI++I KLG AYRFSISW RI P+G G ++N +G+ FYN IID LL+K
Sbjct: 82 RWKEDIEIIEKLGVKAYRFSISWPRILPEGTG-RVNQKGLDFYNRIIDTLLEKGITPFVT 140
Query: 132 ------------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTG 161
F +FGDRVKNWIT+NEP A+ G+ G
Sbjct: 141 IYHWDLPFALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYG 200
Query: 162 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKI 221
+ APG + H+ + AHA A V++ KD G IG+V + + E S+K
Sbjct: 201 VHAPGMRDIYVA--FRAVHNLLRAHARAVKVFRETVKD---GKIGIVFNNGYFEPASEKE 255
Query: 222 EDKSAAARRLDFQ-IGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLN 280
ED A F +L+PIY GDYPE++ + LP+ + D ++ +DFVGLN
Sbjct: 256 EDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGLN 315
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
+Y+ + +P + SF E + + WE +VP G+ +L +
Sbjct: 316 YYSGHLVKFDPDAPAKVSFVERDLPKTAMGWE---------------IVPEGIYWILKKV 360
Query: 341 AKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRG 398
+ YN P +Y+TENG DD ++ +H D+ R+ Y K ++ +AI++G ++G
Sbjct: 361 KEEYNPPEVYITENGAAFDDVVSEDGRVH----DQNRIDYLKAHIGQAWKAIQEGVPLKG 416
Query: 399 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
YFVWSLLDNFEWA+GY+KRFG+VYVDY R K S YW+
Sbjct: 417 YFVWSLLDNFEWAEGYSKRFGIVYVDYSTQK-RIVKDSGYWY 457
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 253/470 (53%), Gaps = 76/470 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD----------- 131
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 132 -------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
F +FGDRVK W+T NEPL T ++GY + I
Sbjct: 132 LPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPL-TFMDGYASEIGMAP 190
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 226
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED+++
Sbjct: 191 SINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRAS 250
Query: 227 AARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNSL 274
F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 251 CENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTH 310
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA-----SEWLYVV 329
DF+G+N YT+ KS EG YE + G ++ + AA S WL VV
Sbjct: 311 DFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKVV 359
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQA 389
PWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +A
Sbjct: 360 PWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLKA 411
Query: 390 I-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
I +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 412 IHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 291 bits (746), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 253/470 (53%), Gaps = 76/470 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD----------- 131
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 132 -------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
F +FGDRVK W+T N+PL T ++GY + I
Sbjct: 132 LPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPL-TFMDGYASEIGMAP 190
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 226
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED+++
Sbjct: 191 SINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRAS 250
Query: 227 AARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNSL 274
F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 251 CENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTH 310
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA-----SEWLYVV 329
DF+G+N YT+ KS EG YE + G ++ + AA S WL VV
Sbjct: 311 DFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKVV 359
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQA 389
PWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +A
Sbjct: 360 PWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLKA 411
Query: 390 I-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
I +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 412 IHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 76/470 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD----------- 131
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 132 -------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
F +FGDRVK W+T N PL T ++GY + I
Sbjct: 132 LPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPL-TFMDGYASEIGMAP 190
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 226
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED+++
Sbjct: 191 SINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRAS 250
Query: 227 AARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNSL 274
F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 251 CENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTH 310
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA-----SEWLYVV 329
DF+G+N YT+ KS EG YE + G ++ + AA S WL VV
Sbjct: 311 DFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKVV 359
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQA 389
PWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +A
Sbjct: 360 PWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLKA 411
Query: 390 I-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
I +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 412 IHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 291 bits (744), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 76/470 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD----------- 131
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 132 -------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
F +FGDRVK W+T N PL T ++GY + I
Sbjct: 132 LPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPL-TFMDGYASEIGMAP 190
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 226
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED+++
Sbjct: 191 SINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRAS 250
Query: 227 AARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNSL 274
F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 251 CENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTH 310
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA-----SEWLYVV 329
DF+G+N YT+ KS EG YE + G ++ + AA S WL VV
Sbjct: 311 DFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKVV 359
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQA 389
PWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +A
Sbjct: 360 PWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLKA 411
Query: 390 I-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
I +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 412 IHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 247/465 (53%), Gaps = 65/465 (13%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKDT---------- 132
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 133 --------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
CF++FGDRVK WITINE +V Y G+F PG
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG 182
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKS 225
H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 183 I-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQE 241
Query: 226 AAARRLDFQIGWYLHPIYY-GDYPEVMRNNLGD----------QLPKFMQKDKELVRNSL 274
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 242 AAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTA 301
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 334
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNV-------DWIYVVPWGVC 354
Query: 335 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DG 393
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 355 KLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLDK 408
Query: 394 ADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 409 VNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 247/465 (53%), Gaps = 65/465 (13%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKDT---------- 132
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 133 --------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
CF++FGDRVK WITINE +V Y G+F PG
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG 182
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKS 225
H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 183 I-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQE 241
Query: 226 AAARRLDFQIGWYLHPIYY-GDYPEVMRNNLGD----------QLPKFMQKDKELVRNSL 274
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 242 AAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTA 301
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 334
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWINV-------DWIYVVPWGVC 354
Query: 335 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DG 393
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 355 KLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLDK 408
Query: 394 ADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 409 VNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 247/465 (53%), Gaps = 65/465 (13%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKDT---------- 132
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 133 --------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
CF++FGDRVK WITIN+ +V Y G+F PG
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPPG 182
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDKS 225
H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 183 I-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQE 241
Query: 226 AAARRLDFQIGWYLHPIYY-GDYPEVMRNNLGD----------QLPKFMQKDKELVRNSL 274
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 242 AAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTA 301
Query: 275 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 334
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNV-------DWIYVVPWGVC 354
Query: 335 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DG 393
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 355 KLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLDK 408
Query: 394 ADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 437
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 409 VNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 245/463 (52%), Gaps = 65/463 (14%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++K FP +F++G ATS+YQIEGA E +G SIWD F+HT GKI + GD+A DHYH
Sbjct: 8 MAKIIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHL 67
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ--------- 129
Y+EDI+L+ ++G +YRFS SW RI P+G G ++N +G+ FY ++D LL+
Sbjct: 68 YREDIELMKEIGIRSYRFSTSWPRILPEGKG-RVNQKGLDFYKRLVDNLLKANIRPMITL 126
Query: 130 -----------------KDTC----------FASFGDRVKNWITINEPLQTAVNGYCTGI 162
+DT F F V W+T NEP A G+ G
Sbjct: 127 YHWDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGN 186
Query: 163 FAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIE 222
APG + VAHH +L+H A +++ ++ G IG+ ++ A D +
Sbjct: 187 HAPGTKDFKTA--LQVAHHLLLSHGMAVDIFR---EEDLPGEIGITLNLTPAYPAGDSEK 241
Query: 223 DKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQK--DKELVRNSLDFVGLN 280
D AA+ D+ W+L P++ G YPE + + L F + D +++ +DF+G+N
Sbjct: 242 DVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFLGIN 301
Query: 281 HYTSRFIAHATKSPEEGSF-YEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNY 339
+Y+ + H P + F E +ME E G W + P GL +L
Sbjct: 302 YYSRMVVRH---KPGDNLFNAEVVKMEDRPSTEMG----------W-EIYPQGLYDILVR 347
Query: 340 IAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVR 397
+ K Y + P+Y+TENG DD+ + +H D+ R+ Y + +A+KDG +R
Sbjct: 348 VNKEYTDKPLYITENGAAFDDKLTEEGKIH----DEKRINYLGDHFKQAYKALKDGVPLR 403
Query: 398 GYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
GY+VWSL+DNFEWA GY+KRFGL+YVDY+NG R K SA W+
Sbjct: 404 GYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWY 446
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 242/468 (51%), Gaps = 65/468 (13%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYHRYKED 82
FP +F+FG +T++YQIEG E +G +IWD HT ++I D +NGD+A D YH+YKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD----------- 131
+ +I L YRFSISW+RI P G+ + +GI +YNN+I+ L++ D
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 132 -------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
F FGDRVK WIT NEP+ GY +AP
Sbjct: 125 LPQYLQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPI-AVCKGYSIKAYAPN 183
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVD-CEWAEANSDKIEDKS 225
+ +T YL H Q++AH A+ +Y+ +K Q G I + + + N++ +D
Sbjct: 184 LNL-KTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIE 242
Query: 226 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLG----------DQLPKFMQKDKELVRNSLD 275
A R F+ GW+ HP+Y GDYP +M+ + +LPKF + + +L++ + D
Sbjct: 243 TAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTAD 302
Query: 276 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 335
F LNHY+SR + + P +A + + E + + ++ VP GLRK
Sbjct: 303 FYALNHYSSRLVTFGS-DPNPNFNPDASYVTSV-----DEAWLKPNETPYIIPVPEGLRK 356
Query: 336 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAI-KDGA 394
+L ++ Y NP + +TENG D+ LDD ++ Y K YL+A QA+ +D
Sbjct: 357 LLIWLKNEYGNPQLLITENGYGDDGQ--------LDDFEKISYLKNYLNATLQAMYEDKC 408
Query: 395 DVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMR 442
+V GY VWSLLDNFEW GY+ FGLV +D+ + K +Y + +
Sbjct: 409 NVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFK 456
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 231/456 (50%), Gaps = 61/456 (13%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F +GVAT+AYQIEGA E RG SIWD F HT GK+ + NG+VA D YHR +ED+
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK------------- 130
L+ LG YRFSISW R+ P G G ++N G+ +Y+ ++D LL
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTG-EVNRAGLDYYHRLVDELLANGIEPFCTLYHWDL 123
Query: 131 -----------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
+ F G ++K WIT NEP A G+ APG
Sbjct: 124 PQALQDQGGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGN 183
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 227
V+HH ++AH A ++++ G IG+ + WA ED A
Sbjct: 184 KDLQLAID--VSHHLLVAHGRAVTLFREL---GISGEIGIAPNTSWAVPYRRTKEDMEAC 238
Query: 228 ARRLDFQIGWYLHPIYYGDYPEVMRN---NLGDQLPKFMQKDKELVRNSLDFVGLNHYTS 284
R + WYL PIY+G+YP+ M + NLG + P + D EL+ +DF+G+N+YTS
Sbjct: 239 LRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPIDFIGINYYTS 297
Query: 285 RFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTY 344
+ Y E ++ E + K W + GL +L Y A Y
Sbjct: 298 SM-----------NRYNPGEAGGMLSSEAISMGAPKTDIGW-EIYAEGLYDLLRYTADKY 345
Query: 345 NNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSL 404
NP +Y+TENG ND L + D+ R+ Y +L ++AI+DG +++GY WSL
Sbjct: 346 GNPTLYITENGA--CYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSL 403
Query: 405 LDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+DNFEWA+GY RFGLV+VDY LVR PK S YW+
Sbjct: 404 MDNFEWAEGYGMRFGLVHVDYDT-LVRTPKDSFYWY 438
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 238/467 (50%), Gaps = 68/467 (14%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+ K FP +F+FG AT+AYQIEGA +E +G SIWD F+H G + NGD+A DHYHR
Sbjct: 1 MEKLRFPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHR 60
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKDT------ 132
YKED+ L+ LG +YRFSI+W RIFP G G +IN +GI FY ++ID L++ D
Sbjct: 61 YKEDVQLLKSLGIKSYRFSIAWPRIFPKGFG-EINQKGIQFYRDLIDELIKNDIEPAITI 119
Query: 133 ------------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGI 162
F FGDRVK WIT NEP + GY G+
Sbjct: 120 YHWDLPQKLQDIGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGV 179
Query: 163 FAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIE 222
APG L AH+ +L+H A Y+ +Q G IG+ ++ +NS E
Sbjct: 180 HAPGIKDMKMA--LLAAHNILLSHFKAVKAYREL---EQDGQIGITLNLSTCYSNSADEE 234
Query: 223 DKSAAARRLDFQIGWYLHPIYYGDYPEVM-----RNNLGDQLPKFMQKDKELVRNSLDFV 277
D +AA R + W+L G YPE M N+ +LPK + + V + DF+
Sbjct: 235 DIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTE---VFETSDFL 291
Query: 278 GLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVL 337
G+N+YT + + + + E + E + K W + P GL +L
Sbjct: 292 GINYYTRQVVKNNS--------------EAFIGAESVAMDNPKTEMGW-EIYPQGLYDLL 336
Query: 338 NYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVR 397
I + Y N +Y+TENG ND ++D+ R+ Y + +A AI+ G ++
Sbjct: 337 TRIHRDYGNIDLYITENGA--AFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLK 394
Query: 398 GYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
GY++WS +DNFEWA+GY KRFG+V+V+YK R K SAYW+ +
Sbjct: 395 GYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQ-ERTIKKSAYWYKELI 440
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 254/493 (51%), Gaps = 80/493 (16%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHY 76
++ + F +F+FGVA+SAYQIEG RG +IWD FTH + D NGD D +
Sbjct: 20 LNSSSFEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSF 76
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQK----- 130
+++DID++ +L YRFSI+WSRI P G ++ +N +GI +Y+ +ID L++K
Sbjct: 77 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPF 136
Query: 131 --------------------------------DTCFASFGDRVKNWITINEPLQTAVNGY 158
D CF FGD VK W+TIN+ GY
Sbjct: 137 VTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGY 196
Query: 159 CTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLV 208
+ + APGR +SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG
Sbjct: 197 GSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPT 255
Query: 209 VDCEWAEANSDKIEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDK 267
+ W +D AA R+ F +GW++ P+ G YP++M + +G +LP F ++
Sbjct: 256 MITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEET 315
Query: 268 ELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQE---------------MERLVEWE 312
LV+ S DF+GLN+Y +++ A + +P + + A + L E +
Sbjct: 316 NLVKGSYDFLGLNYYFTQY-AQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESD 374
Query: 313 GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDD 372
GG+ S +Y P G+ V++Y Y NP IYVTENG+ +++ E + D
Sbjct: 375 GGD------GSSNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENR--KESMLD 426
Query: 373 KLRVRYFKGYLSAVAQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVR 431
R+ Y +L + + IK+ +V+GY W+L DN+E+ G+T RFGL Y+++ N R
Sbjct: 427 YTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDR 486
Query: 432 HPKSSAYWFMRFL 444
K S W+ +F+
Sbjct: 487 DLKKSGQWYQKFI 499
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/465 (35%), Positives = 243/465 (52%), Gaps = 74/465 (15%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++G ATS+YQIEGA E +G SIWD FT GKI + +GDVA DHYH
Sbjct: 1 NVKK--FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYH 58
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD------ 131
RY++D+DL+ +LG YRFSI+W+RI PD +IN G+ FY +++ L ++D
Sbjct: 59 RYEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMAT 117
Query: 132 ------------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTG 161
A+ GD++ W+T NEP+ T GY G
Sbjct: 118 LYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMG 177
Query: 162 IFAPGRHQHSSTEPYL---VAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANS 218
+FAPG +P L VAHH +L+H A + + G +G+ ++ S
Sbjct: 178 LFAPGL-----KDPTLGGRVAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPVS 230
Query: 219 DKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQ-KDKELVRNSLDFV 277
+ D AA R FQ +L P+ G Y + + LP+F+ +D + + +DF+
Sbjct: 231 AEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDFL 289
Query: 278 GLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVL 337
G+N+Y + + + P E ++E V G E+ P GL +L
Sbjct: 290 GVNYYNPMRVKSSPQPPG----IEVVQVESPVTAMGWEI------------APEGLYDLL 333
Query: 338 NYIAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
I +TY PIY+TENG DD+ + S ++D RV YF+G++ A +A+ DG D
Sbjct: 334 MGITRTYGKLPIYITENGAAFDDQPDQSG----QVNDPQRVGYFQGHIGAARRALADGVD 389
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+RGY+ WSLLDNFEWA+GY+KRFG++YVD++ R K SA W+
Sbjct: 390 LRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET-QQRTLKQSAQWY 433
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/465 (35%), Positives = 243/465 (52%), Gaps = 74/465 (15%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++G ATS+YQIEGA E +G SIWD FT GKI + +GDVA DHYH
Sbjct: 22 NVKK--FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYH 79
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD------ 131
RY++D+DL+ +LG YRFSI+W+RI PD +IN G+ FY +++ L ++D
Sbjct: 80 RYEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMAT 138
Query: 132 ------------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTG 161
A+ GD++ W+T NEP+ T GY G
Sbjct: 139 LYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMG 198
Query: 162 IFAPGRHQHSSTEPYL---VAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANS 218
+FAPG +P L VAHH +L+H A + + G +G+ ++ S
Sbjct: 199 LFAPGL-----KDPTLGGRVAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPVS 251
Query: 219 DKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQ-KDKELVRNSLDFV 277
+ D AA R FQ +L P+ G Y + + LP+F+ +D + + +DF+
Sbjct: 252 AEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDFL 310
Query: 278 GLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVL 337
G+N+Y + + + P E ++E V G E+ P GL +L
Sbjct: 311 GVNYYNPMRVKSSPQPPG----IEVVQVESPVTAMGWEI------------APEGLYDLL 354
Query: 338 NYIAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 395
I +TY PIY+TENG DD+ + S ++D RV YF+G++ A +A+ DG D
Sbjct: 355 MGITRTYGKLPIYITENGAAFDDQPDQSG----QVNDPQRVGYFQGHIGAARRALADGVD 410
Query: 396 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
+RGY+ WSLLDNFEWA+GY+KRFG++YVD++ R K SA W+
Sbjct: 411 LRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET-QQRTLKQSAQWY 454
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 268 bits (684), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 245/459 (53%), Gaps = 71/459 (15%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 128 ---LQ-----------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
LQ +T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL 183
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSA 226
+ V HH ++AH + R++++ G IG+ + WA S EDK+A
Sbjct: 184 TNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAA 237
Query: 227 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT- 283
AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 238 CARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSM 297
Query: 284 --SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 341
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 298 SVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYLQ 340
Query: 342 KTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFV 401
K Y N IY+TENG ND ++ DD+ R+ Y + +L V +AI DG V+GY
Sbjct: 341 K-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRAIHDGLHVKGYMA 396
Query: 402 WSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKQSYYWY 434
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 244/461 (52%), Gaps = 75/461 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 128 ---LQ-----------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
LQ +T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL 183
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSA 226
+ V HH ++AH + R++++ G IG+ + WA S EDK+A
Sbjct: 184 TNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAA 237
Query: 227 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT- 283
AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 238 CARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSM 297
Query: 284 --SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 341
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 298 SVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYLQ 340
Query: 342 KTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
K Y N IY+TENG ++DE + + D R+ Y + +L V + I DG V+GY
Sbjct: 341 K-YGNIDIYITENGACINDEVVNGK-----VQDDRRISYMQQHLVQVHRTIHDGLHVKGY 394
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 395 MAWSLLDNFEWAEGYNMRFGMIHVDFRTQ-VRTPKESYYWY 434
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 244/461 (52%), Gaps = 75/461 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 65
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L
Sbjct: 66 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 124
Query: 128 ---LQ-----------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
LQ +T F F ++++W+T NEP A G+ APG
Sbjct: 125 PQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL 184
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSA 226
+ V HH ++AH + R++++ G IG+ + WA S EDK+A
Sbjct: 185 TNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAA 238
Query: 227 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT- 283
AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 239 CARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSM 298
Query: 284 --SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 341
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 299 SVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYLQ 341
Query: 342 KTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
K Y N IY+TENG ++DE + + D R+ Y + +L V + I DG V+GY
Sbjct: 342 K-YGNIDIYITENGACINDEVVNGK-----VQDDRRISYMQQHLVQVHRTIHDGLHVKGY 395
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 396 MAWSLLDNFEWAEGYNMRFGMIHVDFRTQ-VRTPKESYYWY 435
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 244/461 (52%), Gaps = 75/461 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LG YRFS+SW RIFP+G G ++N +G+ +Y+ ++D L
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 128 ---LQ-----------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
LQ +T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL 183
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSA 226
+ V HH ++AH + R++++ G IG+ + WA S EDK+A
Sbjct: 184 TNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAA 237
Query: 227 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT- 283
AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 238 CARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSM 297
Query: 284 --SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 341
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 298 SVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYLQ 340
Query: 342 KTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
K Y N IY+TENG ++DE + + D R+ Y + +L V + I DG V+GY
Sbjct: 341 K-YGNIDIYITENGACINDEVVNGK-----VQDDRRISYMQQHLVQVHRTIHDGLHVKGY 394
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 395 MAWSLLDNFEWAEGYNMRFGMIHVDFRTQ-VRTPKQSYYWY 434
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 265 bits (676), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 244/459 (53%), Gaps = 71/459 (15%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LG YRFS+SW RIFP+G G ++N +G+ +Y+ ++D L
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 128 ---LQ-----------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
LQ +T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL 183
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKSA 226
+ V HH ++AH + R++++ G IG+ + WA S EDK+A
Sbjct: 184 TNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAA 237
Query: 227 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT- 283
AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 238 CARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSM 297
Query: 284 --SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 341
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 298 SVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYLQ 340
Query: 342 KTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFV 401
K Y N IY+TENG ND ++ DD+ R+ Y + +L V + I DG V+GY
Sbjct: 341 K-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRTIHDGLHVKGYMA 396
Query: 402 WSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRTQ-VRTPKESYYWY 434
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 241/468 (51%), Gaps = 69/468 (14%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G AT++YQIEGA E R SIWD + T G++ + GDVA DHYHR++ED+
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDV 77
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD------------ 131
L+A+LG AYRFS++W RI P G G + +G+ FY + D LL K
Sbjct: 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQ-KGLDFYRRLADELLAKGIQPVATLYHWDL 136
Query: 132 ------------------------TCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
+ GDRVK W T+NEP +A GY +G+ APGR
Sbjct: 137 PQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR 196
Query: 168 HQHSSTEPYLV---AHHQILAHAAAF-SVYQRKYKDKQGG---NIGLVVDCEWAEANSDK 220
T+P AHH L H A ++ R D Q NI V ++A++D
Sbjct: 197 -----TDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSDADADA 251
Query: 221 IEDKSAAARRLDFQIGWYLHPIYYGDYPE-VMRNNLGDQLPKFMQK-DKELVRNSLDFVG 278
+ A A R+ + P+ G YPE ++++ G F++ D L LDF+G
Sbjct: 252 VRRIDALANRV------FTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFLG 305
Query: 279 LNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVI------GEKAASEWLYVVPWG 332
+N+Y+ ++ A S S + W G + + GE A W V P G
Sbjct: 306 VNYYSPTLVSEADGSGTHNSDGHGRSAHS--PWPGADRVAFHQPPGETTAMGWA-VDPSG 362
Query: 333 LRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKD 392
L ++L ++ + P+ +TENG +D + ++D R+ Y + +L+AV +AIKD
Sbjct: 363 LYELLRRLSSDFPALPLVITENGA--AFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKD 420
Query: 393 GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
G+DVRGYF+WSLLDNFEWA GY+KRFG VYVDY G R PK+SA W+
Sbjct: 421 GSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTG-TRIPKASARWY 467
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 250/479 (52%), Gaps = 76/479 (15%)
Query: 31 GVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHYHRYKEDIDLIAK 88
GVA+SAYQIEG RG +IWD FTH D NGD D + +++DID++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 89 LGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQK----------------- 130
L YRFSI+WSRI P G ++ +N +GI +Y+ +I L++K
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 131 --------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ- 169
D CF FGD VK W+TIN+ GY + + APGR
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 170 ---------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDK 220
+SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG + W +D
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 265
Query: 221 IEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 279
AA R+ +F +GW++ P+ G YP++M + +G++LP F ++ LV+ S DF+GL
Sbjct: 266 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 325
Query: 280 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWE----GGEVIG-----EKA-ASEWLYVV 329
N+Y +++ A + +P + + A M+ + G IG +KA +++ +Y
Sbjct: 326 NYYFTQY-AQPSPNPVNSTNHTAM-MDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYY 383
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMD---DEENDSSPLHEMLDDKLRVRYFKGYLSAV 386
P G+ V++Y Y NP IYVTENG+ DE + S L D R+ Y +L +
Sbjct: 384 PKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSML-----DYTRIDYLCSHLCFL 438
Query: 387 AQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
+ IK+ +V+GY W+L DN+E+ +G+T RFGL Y+D+ N R K S W+ F+
Sbjct: 439 NKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQTFI 497
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 244/465 (52%), Gaps = 73/465 (15%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LGF YRFS++W RI P IN EG+ FY +++D +
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 131
Query: 128 ---------------LQKDTCFAS-----FGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
+Q +AS FG+R+ W TINEP ++ GY TG APG
Sbjct: 132 PQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG- 190
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 227
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +AA
Sbjct: 191 -HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAAA 246
Query: 228 ARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYTS 284
RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 247 IRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTR 306
Query: 285 RFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 342
I +S + S + ++ ME V G E+ P K+L I K
Sbjct: 307 SII----RSTNDASLLQVEQVHMEEPVTDMGWEI------------HPESFYKLLTRIEK 350
Query: 343 TYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
++ PI +TENG M DE + ++D R RY + +L A + I++G ++GY
Sbjct: 351 DFSKGLPILITENGAAMRDELVNGQ-----IEDTGRQRYIEEHLKACHRFIEEGGQLKGY 405
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
FVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 406 FVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 449
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 250/479 (52%), Gaps = 76/479 (15%)
Query: 31 GVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHYHRYKEDIDLIAK 88
GVA+SAYQIEG RG +IWD FTH D NGD D + +++DID++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 89 LGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQK----------------- 130
L YRFSI+WSRI P G ++ +N +GI +Y+ +I L++K
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 131 --------------------DTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ- 169
D CF FGD VK W+TIN+ GY + + APGR
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 170 ---------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDK 220
+SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG + W +D
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 267
Query: 221 IEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 279
AA R+ +F +GW++ P+ G YP++M + +G++LP F ++ LV+ S DF+GL
Sbjct: 268 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 327
Query: 280 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWE----GGEVIG-----EKA-ASEWLYVV 329
N+Y +++ A + +P + + A M+ + G IG +KA +++ +Y
Sbjct: 328 NYYFTQY-AQPSPNPVNSTNHTAM-MDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYY 385
Query: 330 PWGLRKVLNYIAKTYNNPPIYVTENGMD---DEENDSSPLHEMLDDKLRVRYFKGYLSAV 386
P G+ V++Y Y NP IYVTENG+ DE + S L D R+ Y +L +
Sbjct: 386 PKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSML-----DYTRIDYLCSHLCFL 440
Query: 387 AQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
+ IK+ +V+GY W+L DN+E+ +G+T RFGL Y+D+ N R K S W+ F+
Sbjct: 441 NKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFI 499
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 244/465 (52%), Gaps = 73/465 (15%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LGF YRFS++W RI P IN EG+ FY +++D +
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 129
Query: 128 ---------------LQKDTCFAS-----FGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
+Q +AS FG+R+ W TINEP ++ GY TG APG
Sbjct: 130 PQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG- 188
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 227
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +AA
Sbjct: 189 -HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAAA 244
Query: 228 ARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYTS 284
RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 245 IRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTR 304
Query: 285 RFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 342
I +S + S + ++ ME V G E+ P K+L I K
Sbjct: 305 SII----RSTNDASLLQVEQVHMEEPVTDMGWEI------------HPESFYKLLTRIEK 348
Query: 343 TYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
++ PI +TENG M DE + ++D R RY + +L A + I++G ++GY
Sbjct: 349 DFSKGLPILITENGAAMRDELVNGQ-----IEDTGRQRYIEEHLKACHRFIEEGGQLKGY 403
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
FVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 404 FVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 447
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/465 (35%), Positives = 243/465 (52%), Gaps = 73/465 (15%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDAL---------------- 127
L+ +LGF YRFS++W RI P IN EG+ FY +++D +
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 131
Query: 128 ---------------LQKDTCFAS-----FGDRVKNWITINEPLQTAVNGYCTGIFAPGR 167
+Q +AS FG+R+ W TINEP ++ GY TG APG
Sbjct: 132 PQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG- 190
Query: 168 HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAA 227
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +AA
Sbjct: 191 -HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAAA 246
Query: 228 ARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYTS 284
RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 247 IRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTR 306
Query: 285 RFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 342
I +S + S + ++ ME V G E+ P K+L I K
Sbjct: 307 SII----RSTNDASLLQVEQVHMEEPVTDMGWEI------------HPESFYKLLTRIEK 350
Query: 343 TYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGY 399
++ PI +TENG M DE + ++D R Y + +L A + I++G ++GY
Sbjct: 351 DFSKGLPILITENGAAMRDELVNGQ-----IEDTGRHGYIEEHLKACHRFIEEGGQLKGY 405
Query: 400 FVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 444
FVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 406 FVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 449
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 224/457 (49%), Gaps = 84/457 (18%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHY RY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-----------DTCFA 135
LG AYRFS++W RI P+G G +IN +G+ FY+ ++D LL D A
Sbjct: 67 QSLGVRAYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 136 -------------------------SFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH 170
+ DRV + T+NEP +A G+ TG APG
Sbjct: 126 LEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRNL 185
Query: 171 SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR 230
+ AHH +L H A + +G+V++ +A A + E A R
Sbjct: 186 EAA--LRAAHHLLLGHGLAVEA----LRAAGARRVGIVLN--FAPAYGEDPEAVDVADR- 236
Query: 231 LDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIAH 289
+ ++L PI YPE + D P + +D ELV LDF+G+N+Y +A
Sbjct: 237 --YHNRFFLDPILGKGYPE---SPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAP 291
Query: 290 ATKS------PEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKT 343
T + P EG A M WE V P GL +L + +
Sbjct: 292 GTGTLPVRYLPPEGP---ATAM----GWE---------------VYPEGLYHLLKRLGRE 329
Query: 344 YNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWS 403
P+YVTENG + + +++D RV Y + ++ A +A ++G D+RGYFVWS
Sbjct: 330 VPW-PLYVTENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWS 386
Query: 404 LLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
L+DNFEWA GYT+RFGL YVD+ + R PK SA W+
Sbjct: 387 LMDNFEWAFGYTRRFGLYYVDFPSQR-RIPKRSALWY 422
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 222/451 (49%), Gaps = 72/451 (15%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHYHRY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDTFARRPGAIRDGSTGEPACDHYHRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKD-TCFAS--------- 136
LG YRFS++W RI P+G G +IN +G+ FY+ ++D LL T F +
Sbjct: 67 QSLGVGVYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQA 125
Query: 137 --------------------------FGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH 170
DRV + T+NEP +A G+ TG APG
Sbjct: 126 LEDRGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRNL 185
Query: 171 SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR 230
+ AHH +L H A + + +G+V++ +A A + E A R
Sbjct: 186 EAA--LRAAHHLLLGHGLAVEALRAAGARR----VGIVLN--FAPAYGEDPEAVDVADR- 236
Query: 231 LDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIAH 289
+ ++L PI YPE + D P + +D E + LDF+G+N+Y +A
Sbjct: 237 --YHNRYFLDPILGRGYPE---SPFQDPPPAPILSRDLEAIARPLDFLGVNYYAPVRVAP 291
Query: 290 ATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPI 349
T P + + + WE V P GL +L + + P+
Sbjct: 292 GT-GPLPVRYLPPEGPVTAMGWE---------------VYPEGLYHLLKRLGREVPW-PL 334
Query: 350 YVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFE 409
Y+TENG + + +++D RV Y + ++ A +A ++G D+RGYFVWSL+DNFE
Sbjct: 335 YITENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFE 392
Query: 410 WAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
WA GYT+RFGL YVD+ + R PK SA W+
Sbjct: 393 WAFGYTRRFGLYYVDFPSQR-RIPKRSALWY 422
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 223/457 (48%), Gaps = 84/457 (18%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHY RY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-----------DTCFA 135
LG AYRFS++W RI P+G G +IN +G+ FY+ ++D LL D A
Sbjct: 67 QSLGVRAYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 136 -------------------------SFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQH 170
+ DRV + T+NEP +A G+ TG APG
Sbjct: 126 LEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRNL 185
Query: 171 SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARR 230
+ AHH +L H A + +G+V++ +A A + E A R
Sbjct: 186 EAA--LRAAHHLLLGHGLAVEA----LRAAGARRVGIVLN--FAPAYGEDPEAVDVADR- 236
Query: 231 LDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIAH 289
+ ++L PI YPE + D P + +D ELV LDF+G+N+Y +A
Sbjct: 237 --YHNRFFLDPILGKGYPE---SPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAP 291
Query: 290 ATKS------PEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKT 343
T + P EG A M WE V P GL +L + +
Sbjct: 292 GTGTLPVRYLPPEGP---ATAM----GWE---------------VYPEGLHHLLKRLGRE 329
Query: 344 YNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWS 403
P+YVTENG + + +++D RV Y + ++ A +A ++G D+RGYFVWS
Sbjct: 330 VPW-PLYVTENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWS 386
Query: 404 LLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 440
L+DNFEWA GYT+R GL YVD+ + R PK SA W+
Sbjct: 387 LMDNFEWAFGYTRRSGLYYVDFPSQR-RIPKRSALWY 422
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 212/453 (46%), Gaps = 98/453 (21%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTE--GKIIDKSNGDVAVDHYHRYKE 81
FP F+FG ATS++QIEG NR W+D+ + E GK+ +S A +H+ Y++
Sbjct: 5 FPEMFLFGTATSSHQIEG----NNR----WNDWWYYEQIGKLPYRSGK--ACNHWELYRD 54
Query: 82 DIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKDTC-------- 133
DI L+ LG++AYRFSI WSR+FP+ K N + Y IID LL +
Sbjct: 55 DIQLMTSLGYNAYRFSIEWSRLFPEE--NKFNEDAFMKYREIIDLLLTRGITPLVTLHHF 112
Query: 134 ---------------------------FASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 166
A ++VK T NEP+ + GY T + P
Sbjct: 113 TSPLWFMKKGGFLREENLKHWEKYIEKVAELLEKVKLVATFNEPMVYVMMGYLTAYWPP- 171
Query: 167 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 226
S + + VA + + AHA A+ + K+K NI +++ SDK D+ A
Sbjct: 172 -FIRSPFKAFKVAANLLKAHAIAYELLHGKFKVGIVKNIPIILPA------SDKERDRKA 224
Query: 227 AARRLDFQIGW-YLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSR 285
A + D W +L I+ G Y V K + ++ DF+G+N+YT+
Sbjct: 225 A-EKADNLFNWHFLDAIWSGKYRGVF-------------KTYRIPQSDADFIGVNYYTAS 270
Query: 286 FIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYN 345
+ H T +P + F+E + + I E+ V P G+ L ++
Sbjct: 271 EVRH-TWNPLK-FFFEVKLAD----------ISERKTQMGWSVYPKGIYMALKKASRY-- 316
Query: 346 NPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLL 405
P+Y+TENG+ LDD+ RV + +L V +AI+DG DVRGYF WS +
Sbjct: 317 GRPLYITENGI-----------ATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFM 365
Query: 406 DNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 438
DN+EW +G+ RFGLV VDY+ R P+ SAY
Sbjct: 366 DNYEWKEGFGPRFGLVEVDYQT-FERRPRKSAY 397
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 220/484 (45%), Gaps = 82/484 (16%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 131 ---DT-------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGI 162
DT CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGK 173
Query: 163 FAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDKI 221
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 174 FPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP--- 229
Query: 222 EDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VRN 272
D AA + L Y G Y E + + L + + +D++ ++
Sbjct: 230 ADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKD 289
Query: 273 SLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 323
DF+G+N+Y S + I H K + S Y+ + + R V +
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV------APDYVPRT 343
Query: 324 EWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRYF 379
+W +++ P GL + + Y N IY+TENG+ DE D++ + D R+ Y
Sbjct: 344 DWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-----VYDDGRIDYV 398
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+W
Sbjct: 399 KQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAHW 457
Query: 440 FMRF 443
+ +
Sbjct: 458 YKKL 461
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 220/484 (45%), Gaps = 82/484 (16%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 131 ---DT-------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGI 162
DT CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGK 173
Query: 163 FAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDKI 221
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 174 FPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP--- 229
Query: 222 EDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VRN 272
D AA + L Y G Y E + + L + + +D++ ++
Sbjct: 230 ADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDAAKD 289
Query: 273 SLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 323
DF+G+N+Y S + I H K + S Y+ + + R V +
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV------APDYVPRT 343
Query: 324 EWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRYF 379
+W +++ P GL + + Y N IY+TENG+ DE D++ + D R+ Y
Sbjct: 344 DWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-----VYDDGRIDYV 398
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+W
Sbjct: 399 KQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAHW 457
Query: 440 FMRF 443
+ +
Sbjct: 458 YKKL 461
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 219/484 (45%), Gaps = 82/484 (16%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK-------- 130
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 131 ---DT-------------------------CFASFGDRVKNWITINEPLQTAVNGYCTGI 162
DT CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGK 173
Query: 163 FAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDKI 221
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 174 FPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP--- 229
Query: 222 EDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VRN 272
D AA + L Y G Y E + + L + + +D++ ++
Sbjct: 230 ADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKD 289
Query: 273 SLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 323
DF+G+N+Y S + I H K + S Y+ + + R V +
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV------APDYVPRT 343
Query: 324 EWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRYF 379
+W +++ P GL + + Y N IY+T NG+ DE D++ + D R+ Y
Sbjct: 344 DWDWIIYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEFVDNT-----VYDDGRIDYV 398
Query: 380 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 439
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+W
Sbjct: 399 KQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAHW 457
Query: 440 FMRF 443
+ +
Sbjct: 458 YKKL 461
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 196/481 (40%), Gaps = 91/481 (18%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYHRYKED 82
FP F +G ATS Q EG + +R +++D + E + D D A D YH+ + D
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHR--NLFDYWYEEEPDLFYDYVGPDTASDAYHQIESD 60
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ------------- 129
+ L+A LG ++YR SI W+R+ D IN +G+ +YN +IDA L
Sbjct: 61 LTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFD 120
Query: 130 ------------------------KDTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 165
CF FGDRVK+W NEP+ Y P
Sbjct: 121 LPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYP 180
Query: 166 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 225
+ VA++ LA A Y+R + G IG +++ A S D +
Sbjct: 181 A--IVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQSEADMA 238
Query: 226 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELV---RNSLDFVGLNHY 282
AA + ++ +G +PE + L + +EL N +D++GLN Y
Sbjct: 239 AAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVDYLGLNFY 298
Query: 283 TSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLY--------------- 327
+ + P VI + EW Y
Sbjct: 299 HPKRVKAPDAIP---------------------VISPSWSPEWYYDPYLMPGRRMNVDKG 337
Query: 328 --VVPWGLRKVLNYIAKTYNNPPIYVTENGM----DDEENDSSPLHEMLDDKLRVRYFKG 381
+ P + + + Y+N P +++ENG+ +D D + + D R+++ K
Sbjct: 338 WEIYPEAVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDET---GQIQDDYRIQFLKE 394
Query: 382 YLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 441
+L+ + + I+ G++ GY VW+ +D + W Y R+GLV + VR PK+SAYWF
Sbjct: 395 HLTYLHKGIEAGSNCFGYHVWTPIDGWSWLNAYKNRYGLVENNIHTQ-VRRPKASAYWFK 453
Query: 442 R 442
+
Sbjct: 454 K 454
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 209/489 (42%), Gaps = 90/489 (18%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV------- 71
V K P +F++G A +A+Q+EG +G +G SI D T + + +V
Sbjct: 3 VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYP 62
Query: 72 ---AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
AVD Y YKEDI L A++GF +R SI+W+RIFP G + N EG+ FY+++ D LL
Sbjct: 63 NHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELL 122
Query: 129 Q-------------------------------------KDTCFASFGDRVKNWITINE-- 149
+ + F + +VK W+T NE
Sbjct: 123 KYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
Query: 150 ---PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIG 206
+ + GYC H++ Y V HHQ +A A A +R + + G +
Sbjct: 183 NQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCML 242
Query: 207 LVVDCEWAEANSDKIEDKSAAARR----LDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 262
+V N D + + R D Q+ Y +P Y + E N+ K
Sbjct: 243 AMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY-YPSYVLNEWERRGFNI-----KM 296
Query: 263 MQKDKELVR-NSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA 321
D +++R + D++G ++Y + + + + S +E V+
Sbjct: 297 EDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVK----------- 345
Query: 322 ASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENGM---DDEENDSSPLHEMLDDKLRVR 377
AS+W + + P GLR L + + Y P+++ ENG D E D S ++D R+
Sbjct: 346 ASDWGWQIDPVGLRYALCELYERYQR-PLFIVENGFGAYDKVEEDGS-----INDDYRID 399
Query: 378 YFKGYLSAVAQAIK-DGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYV----DYKNGLVR 431
Y + ++ + +A+ DG D+ GY W +D + G Y+KR+G +YV D + R
Sbjct: 400 YLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSR 459
Query: 432 HPKSSAYWF 440
K S W+
Sbjct: 460 SRKKSFNWY 468
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 210/487 (43%), Gaps = 86/487 (17%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AMSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A++GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 -------------------------------------KDTCFASFGDRVKNWITINE--- 149
+ CF + D+VK W+T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN 182
Query: 150 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 207
Q + Y AH++++A A A + + G +
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVA 242
Query: 208 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--FMQK 265
+ A N I A ++ + ++H G YPE + + K F ++
Sbjct: 243 MCPIYPATCNPKDILMAQKAMQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDFTER 298
Query: 266 D-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 323
D K+L ++D++G ++Y S I AH +P +Y+ E E LV+ AS
Sbjct: 299 DKKDLFEGTVDYIGFSYYMSFVIDAHRENNP----YYDYLETEDLVK------NPYVKAS 348
Query: 324 EWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRVRYF 379
+W + + P GLR LN+ Y + P+++ ENG +D E D M+ D R+ Y
Sbjct: 349 DWDWQIDPQGLRYALNWFTDMY-HLPLFIVENGFGAIDQVEADG-----MVHDDYRIDYL 402
Query: 380 KGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLVRHP 433
++ + +A+ +DG ++ GY W +D G KR+G +YVD K L R P
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSP 462
Query: 434 KSSAYWF 440
K S W+
Sbjct: 463 KLSFNWY 469
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 210/487 (43%), Gaps = 86/487 (17%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AMSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A++GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 -------------------------------------KDTCFASFGDRVKNWITINE--- 149
+ CF + D+VK W+T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN 182
Query: 150 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 207
Q + Y AH++++A A A + + G +
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVA 242
Query: 208 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--FMQK 265
+ A N I A ++ + ++H G YPE + + K F ++
Sbjct: 243 MCPIYPATCNPKDILMAQKAMQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDFTER 298
Query: 266 D-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 323
D K+L ++D++G ++Y S I AH +P +Y+ E E LV+ AS
Sbjct: 299 DKKDLFEGTVDYIGFSYYMSFVIDAHRENNP----YYDYLETEDLVK------NPYVKAS 348
Query: 324 EWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRVRYF 379
+W + + P GLR LN+ Y + P+++ +NG +D E D M+ D R+ Y
Sbjct: 349 DWDWQIDPQGLRYALNWFTDMY-HLPLFIVQNGFGAIDQVEADG-----MVHDDYRIDYL 402
Query: 380 KGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLVRHP 433
++ + +A+ +DG ++ GY W +D G KR+G +YVD K L R P
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSP 462
Query: 434 KSSAYWF 440
K S W+
Sbjct: 463 KLSFNWY 469
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 209/494 (42%), Gaps = 92/494 (18%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AXSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A+ GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 -------------------------------------KDTCFASFGDRVKNWITINE--- 149
+ CF + D+VK W T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINN 182
Query: 150 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 207
Q + Y AH++++A A A + + NIG
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIXYQAAHYELVASARAVKI---GHAINPNLNIGC 239
Query: 208 -VVDCEW--AEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--F 262
V C A N I A ++ + ++H G YPE + + K F
Sbjct: 240 XVAXCPIYPATCNPKDILXAQKAXQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDF 295
Query: 263 MQKD-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEK 320
++D K+L ++D++G ++Y S I AH +P +Y+ E E LV+
Sbjct: 296 TERDKKDLFEGTVDYIGFSYYXSFVIDAHRENNP----YYDYLETEDLVK------NPYV 345
Query: 321 AASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRV 376
AS+W + + P GLR LN+ Y + P+++ ENG +D E D + D R+
Sbjct: 346 KASDWDWQIDPQGLRYALNWFTDXY-HLPLFIVENGFGAIDQVEADGX-----VHDDYRI 399
Query: 377 RYFKGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLV 430
Y ++ +A+ +DG ++ GY W +D G KR+G +YVD K L
Sbjct: 400 DYLGAHIKEXIKAVDEDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLK 459
Query: 431 RHPKSSAYWFMRFL 444
R PK S W+ +
Sbjct: 460 RSPKLSFNWYKEVI 473
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 214/492 (43%), Gaps = 100/492 (20%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFT-HTEGKIIDKSNGDVA---------V 73
FP F++G A +A+Q+EG +EG +G S D T T + + ++G VA +
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 74 DHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQK--- 130
D YHRY EDI+L A+ GF +R SI+W+RIFP+G ++ N G+ FY+++ D L+
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 131 ----------------------------------DTCFASFGDRVKNWITINEPLQTAVN 156
CF + D+V W T NE + N
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNE-INNQTN 189
Query: 157 GYCTG--------IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ-GGNIGL 207
G I PG ++ Y AH++++A AAA + + D Q G I
Sbjct: 190 FESDGAXLTDSGIIHQPGENRERWX--YQAAHYELVASAAAVQLGHQINPDFQIGCXIAX 247
Query: 208 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYY-GDYPEVMRNNLGDQ---LPKFM 263
A +D + + A R Y ++ G YP+ +RN + L
Sbjct: 248 CPIYPLTAAPADVLFAQRAXQTRF------YFADVHCNGTYPQWLRNRFESEHFNLDITA 301
Query: 264 QKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEK--A 321
+ K L ++D++G ++Y S + ++ +L E +++
Sbjct: 302 EDLKILQAGTVDYIGFSYYXS---------------FTVKDTGKLAYNEEHDLVKNPYVK 346
Query: 322 ASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENGMD--DEENDSSPLHEMLDDKLRVRY 378
AS+W + V P GLR N+ Y + P+++ ENG+ D++ + +H D R+ Y
Sbjct: 347 ASDWGWQVDPVGLRYAXNWFTDRY-HLPLFIVENGLGAIDKKTADNQIH----DDYRIDY 401
Query: 379 FKGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDYKN----GLVRH 432
+L + A+ +DG D+ GY W +D + G +KR+G +YVD + L R+
Sbjct: 402 LTDHLRQIKLAVLEDGVDLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRY 461
Query: 433 PKSSAYWFMRFL 444
K S WF +
Sbjct: 462 KKDSFTWFQHVI 473
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 134/307 (43%), Gaps = 71/307 (23%)
Query: 134 FASF-----GDRVKNWITINEPLQTAVNGYCT--GIFAPGRHQHSSTEPYLVAHHQILAH 186
FA+F D V W T+NEP GY F PG + E + I AH
Sbjct: 188 FAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEK--AKFNLIQAH 245
Query: 187 AAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGD 246
A+ ++Y +K ++G++ W + +++ +D+ R+ D++ LH
Sbjct: 246 IGAYDAI-KEYSEK---SVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHS----- 296
Query: 247 YPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFI-----AHATKSPEEGSFYE 301
+ LD++G+N+Y SR + H P G E
Sbjct: 297 ------------------------KGKLDWIGVNYY-SRLVYGAKDGHLVPLPGYGFMSE 331
Query: 302 AQEMERLVEWEGGEVIGEKAASEWLY-VVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEE 360
GG + AS++ + + P GL +L Y+ Y P I +TENGM D
Sbjct: 332 ----------RGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMI-ITENGMADAA 380
Query: 361 NDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGL 420
D+ R Y +L AV A+K+GADVRGY WSL DN+EWAQG+ RFGL
Sbjct: 381 -----------DRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGL 429
Query: 421 VYVDYKN 427
VYVD++
Sbjct: 430 VYVDFET 436
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDK-SNGDVAVD---HYHRY 79
FP NF+FG + S +Q E G+ S W + H + I +GD+ + ++H Y
Sbjct: 4 FPKNFMFGYSWSGFQFEMGLP-GSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLY 62
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFP 105
K+D D+ KLG D R I W+RIFP
Sbjct: 63 KQDHDIAEKLGMDCIRGGIEWARIFP 88
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 216 ANSDKIEDKSA---AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRN 272
ANSD A AA R F W + V+R LG ++ ++
Sbjct: 264 ANSDFTPLTDADREAAERAKFDNRWAF-------FDAVVRGQLGGST-------RDDLKG 309
Query: 273 SLDFVGLNHYTSRFIAHATKSPEEGSFYE-AQEMERLVEWEGGEVIGEKAASEWLYVVPW 331
LD++G+N+YT + + GS YE E G G + P
Sbjct: 310 RLDWIGVNYYTRQVVR------ARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPE 363
Query: 332 GLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK 391
GL VL Y+ P + VTENG+ DE D R Y ++ V +A++
Sbjct: 364 GLYNVLKEYWDRYHLP-LLVTENGIADE-----------GDYQRPYYLVSHVYQVHRALQ 411
Query: 392 DGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 438
DG +V GY WSL DN+EWA G++KRFGL+ VDY + H + SA+
Sbjct: 412 DGVNVIGYLHWSLADNYEWASGFSKRFGLLMVDYSTKRL-HWRPSAF 457
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVD-------HY 76
FP +F+FG + + +Q E S W + H I + G V+ D ++
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENI---AAGLVSGDFPENGPGYW 60
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFP 105
Y++ D +G A R + WSRIFP
Sbjct: 61 GNYRKFHDAAQAMGLTAARIGVEWSRIFP 89
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 166/401 (41%), Gaps = 51/401 (12%)
Query: 36 AYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHY-HRYKEDIDLIAKLGFDAY 94
+ ++ E G+ + D + +D+ AV+HY YK+ ++ KL + Y
Sbjct: 91 TFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLY 150
Query: 95 RFSIS-W--SRIFPDGLGTKINMEGITFYNNIIDALLQKDTCFASFGDRVKNWITINEPL 151
+ + W + I +G G ++++ G+ W T+NEP
Sbjct: 151 HWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVMWSTMNEPN 210
Query: 152 QTAVNGY--CTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVV 209
GY G F PG + + + I AHA A+ +R K +GL+
Sbjct: 211 VVYEQGYMFVKGGFPPGYLSLEAADK--ARRNMIQAHARAYDNIKRFSKKP----VGLIY 264
Query: 210 DCEWAEANSDKIE--DKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDK 267
+W E E DK +++ +YY + +++ G + ++ +
Sbjct: 265 AFQWFELLEGPAEVFDKFKSSK------------LYY--FTDIVSK--GSSIIN-VEYRR 307
Query: 268 ELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLY 327
+L N LD++G+N+Y+ P Y + GG E S++ +
Sbjct: 308 DLA-NRLDWLGVNYYSRLVYKIVDDKPIILHGYG------FLCTPGGISPAENPCSDFGW 360
Query: 328 -VVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAV 386
V P GL +L + Y I VTENG+ D D LR Y ++ +V
Sbjct: 361 EVYPEGLYLLLKELYNRYGVDLI-VTENGVSDSR-----------DALRPAYLVSHVYSV 408
Query: 387 AQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN 427
+A +G V+GY WSL DN+EWAQG+ ++FGLV VD+K
Sbjct: 409 WKAANEGIPVKGYLHWSLTDNYEWAQGFRQKFGLVMVDFKT 449
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 24 FPPNFVFGVATSAYQIEGAC---EEGNRGASIW-DDFTHTEGKIIDKSNGDVAVDHYHRY 79
FP +F+ G ++S +Q E E+ N +W D +T ++ + +++
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLN 62
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFP 105
+ D DL KLG + R + WSRIFP
Sbjct: 63 QNDHDLAEKLGVNTIRVGVEWSRIFP 88
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 137 FGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL-AHAAAFSVY 193
F D V + T+NEP + F PG + S E A + I+ AHA A+
Sbjct: 194 FDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNIIQAHARAYDGI 250
Query: 194 QRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRL--DFQIGWYLHPIYYGDYPEVM 251
+ K +G++ +A ++ + DK A + + W+ I G E+
Sbjct: 251 KSVSKKP----VGII----YANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRG---EIT 299
Query: 252 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEAQEMERLVE 310
R N K ++ D ++ LD++G+N+YT + K G + E +
Sbjct: 300 RGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSV-- 349
Query: 311 WEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEML 370
+ G + P GL VL Y+ +YVTENG+ D+
Sbjct: 350 ----SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYH-LYMYVTENGIADDA---------- 394
Query: 371 DDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNG-L 429
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+ VDY L
Sbjct: 395 -DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL 453
Query: 430 VRHPKSSAY 438
P S Y
Sbjct: 454 YWRPSSLVY 462
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINME 115
K + K+G R + WSR FP+ L N +
Sbjct: 64 KTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFD 99
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 137 FGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL-AHAAAFSVY 193
F D V + T+NEP + F PG + S E A + I+ AHA A+
Sbjct: 194 FDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNIIQAHARAYDGI 250
Query: 194 QRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRN 253
+ K +G++ + +DK D A + W+ I G E+ R
Sbjct: 251 KSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAIIRG---EITRG 301
Query: 254 NLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEAQEMERLVEWE 312
N K ++ D ++ LD++G+N+YT + K G + E +
Sbjct: 302 N-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV---- 349
Query: 313 GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDD 372
+ G + P GL VL Y+ +YVTENG+ D+ D
Sbjct: 350 --SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYH-LYMYVTENGIADDA-----------D 395
Query: 373 KLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDY 425
R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+ VDY
Sbjct: 396 YQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDY 448
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 24 FPPNFVFGVATSAYQIE---GACEEGNRGASIW-DDFTHTEGKIIDKSNGDVAVDHYHRY 79
FP +F FG + + +Q E E+ N W D + ++ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINME 115
K D K+G R ++ WSRIFP+ L N +
Sbjct: 64 KTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFD 99
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 137 FGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL-AHAAAFSVY 193
F D V + T+NEP + F PG + S E A + I+ AHA A+
Sbjct: 194 FDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNIIQAHARAYDGI 250
Query: 194 QRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRN 253
+ K +G++ + +DK D A + W+ I G E+ R
Sbjct: 251 KSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAIIRG---EITRG 301
Query: 254 NLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEAQEMERLVEWE 312
N K ++ D ++ LD++G+N+YT + K G + E +
Sbjct: 302 N-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV---- 349
Query: 313 GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDD 372
+ G + P GL VL Y+ +YVTENG+ D+ D
Sbjct: 350 --SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYH-LYMYVTENGIADDA-----------D 395
Query: 373 KLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDY 425
R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+ VDY
Sbjct: 396 YQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDY 448
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINME 115
K D K+G R ++ WSRIFP+ L N +
Sbjct: 64 KTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFD 99
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 137 FGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL-AHAAAFSVY 193
F D V + T+NEP + F PG + S E A + I+ AHA A+
Sbjct: 194 FDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNIIQAHARAYDGI 250
Query: 194 QRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRL--DFQIGWYLHPIYYGDYPEVM 251
+ K +G++ +A ++ + DK A + + W+ I G E+
Sbjct: 251 KSVSKKP----VGII----YANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRG---EIT 299
Query: 252 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEAQEMERLVE 310
R N K ++ D ++ LD++G+N+YT + K G + E +
Sbjct: 300 RGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV-- 349
Query: 311 WEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEML 370
+ G + P GL VL Y+ +YVTENG+ D+
Sbjct: 350 ----SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYH-LYMYVTENGIADDA---------- 394
Query: 371 DDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDY 425
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+ VDY
Sbjct: 395 -DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDY 448
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINME 115
K D K+G R + WSR FP+ L N +
Sbjct: 64 KTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFD 99
>pdb|1V8F|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
Synthetase) From Thermus Thermophilus Hb8
pdb|1V8F|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
Synthetase) From Thermus Thermophilus Hb8
Length = 276
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 74 DHYHRYKEDID----LIAKLGFDAYRFSISWSRIFPDGLGTKINMEG 116
+ YHRY D++ L+ + G D F+ ++P+G T++ +EG
Sbjct: 61 EDYHRYPRDLERDRALLQEAGVDLL-FAPGVEEMYPEGFATRVQVEG 106
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 103 HEDDKFIADKTK------FALGQGVGVILSI--GETLEEKKAGKTLDVVERQLNAVLEEV 154
Query: 341 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 383
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 155 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 213
Query: 384 SAVAQAIKDGADVRGYFV 401
+ A KD ADV G+ V
Sbjct: 214 GSNAVTFKDKADVDGFLV 231
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 26/138 (18%)
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 341 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 383
K + N P+ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDFTNVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 384 SAVAQAIKDGADVRGYFV 401
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 26/138 (18%)
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 103 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 154
Query: 341 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 383
K + N P+ G+ D+ +H L DK LR+ Y
Sbjct: 155 -KDFTNVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 213
Query: 384 SAVAQAIKDGADVRGYFV 401
+ A KD ADV G+ V
Sbjct: 214 GSNAVTFKDKADVDGFLV 231
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 341 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 383
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 384 SAVAQAIKDGADVRGYFV 401
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 281 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 340
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 341 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 383
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 384 SAVAQAIKDGADVRGYFV 401
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces
Cerevisiae Presents Some Novel Features Of Structure
That Lead To A Surprising "dimer- Monomer" State Change
Induced By Substrate Binding
pdb|4FMM|B Chain B, Dimeric Sec14 Family Homolog 3 From Saccharomyces
Cerevisiae Presents Some Novel Features Of Structure
That Lead To A Surprising "dimer- Monomer" State Change
Induced By Substrate Binding
Length = 360
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 334 RKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDG 393
+K+ + + K ++NP + V + + E+D PL E L F YL A +KD
Sbjct: 45 QKMYDEVLKHFSNPDLKVYTSEKNKSEDDLKPLEEEEKAWLTRECFLRYLRATKWVLKDC 104
Query: 394 AD 395
D
Sbjct: 105 ID 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,431,885
Number of Sequences: 62578
Number of extensions: 701608
Number of successful extensions: 2040
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1556
Number of HSP's gapped (non-prelim): 157
length of query: 455
length of database: 14,973,337
effective HSP length: 102
effective length of query: 353
effective length of database: 8,590,381
effective search space: 3032404493
effective search space used: 3032404493
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)