Query 012827
Match_columns 455
No_of_seqs 249 out of 465
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 17:00:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ano_A AP-4-A phosphorylase; d 99.3 1.5E-12 5.1E-17 124.7 7.0 116 134-254 39-174 (218)
2 3n1s_A HIT-like protein HINT; 99.2 4.3E-12 1.5E-16 109.9 4.9 78 177-254 20-107 (119)
3 4egu_A Histidine triad (HIT) p 99.2 1.2E-11 4.1E-16 106.6 4.8 79 177-255 21-109 (119)
4 1fit_A FragIle histidine prote 99.2 4.8E-11 1.6E-15 106.5 8.2 78 178-255 17-103 (147)
5 3oj7_A Putative histidine tria 99.2 4.5E-11 1.5E-15 102.8 7.6 79 176-254 23-109 (117)
6 3o0m_A HIT family protein; ssg 99.1 8.3E-11 2.8E-15 105.5 8.9 78 177-254 22-109 (149)
7 3lb5_A HIT-like protein involv 99.1 5.2E-11 1.8E-15 108.6 7.2 78 177-254 45-131 (161)
8 3o1c_A Histidine triad nucleot 99.1 5.3E-11 1.8E-15 104.0 6.3 79 176-254 31-118 (126)
9 3imi_A HIT family protein; str 99.1 1E-10 3.6E-15 104.6 8.3 79 176-254 25-112 (147)
10 3ksv_A Uncharacterized protein 99.1 1.8E-10 6.1E-15 103.8 9.6 78 177-254 28-114 (149)
11 1y23_A HIT, histidine triad pr 99.1 3.2E-11 1.1E-15 107.1 4.3 78 177-254 22-108 (145)
12 2eo4_A 150AA long hypothetical 99.1 1.4E-10 4.7E-15 103.8 8.3 77 178-254 17-102 (149)
13 3r6f_A HIT family protein; str 99.0 2.2E-10 7.6E-15 101.1 7.0 77 177-254 21-101 (135)
14 3l7x_A SMU.412C, putative HIT- 99.0 3.4E-10 1.2E-14 104.5 8.4 79 176-254 52-139 (173)
15 1xqu_A HIT family hydrolase; p 99.0 3.5E-10 1.2E-14 101.9 6.1 78 177-254 52-139 (147)
16 3p0t_A Uncharacterized protein 98.9 6.6E-09 2.3E-13 91.6 9.1 74 177-254 22-103 (138)
17 1ems_A Nitfhit, NIT-fragIle hi 98.8 8.5E-09 2.9E-13 106.7 8.1 79 176-254 311-398 (440)
18 2oik_A Histidine triad (HIT) p 98.8 2.1E-08 7.2E-13 90.1 8.8 74 178-255 24-105 (154)
19 3ohe_A Histidine triad (HIT) p 98.7 3.5E-08 1.2E-12 87.7 8.4 72 179-254 18-97 (137)
20 3i24_A HIT family hydrolase; s 98.6 8.2E-08 2.8E-12 86.6 8.1 72 179-254 18-97 (149)
21 1gup_A Galactose-1-phosphate u 98.4 5.5E-07 1.9E-11 91.3 9.4 76 178-253 214-301 (348)
22 3nrd_A Histidine triad (HIT) p 98.4 6.9E-07 2.3E-11 79.0 8.6 70 180-254 21-99 (135)
23 1z84_A Galactose-1-phosphate u 98.3 1.2E-06 4.2E-11 89.0 9.5 77 178-254 229-318 (351)
24 3sp4_A Aprataxin-like protein; 98.3 3.2E-07 1.1E-11 86.9 4.2 73 178-255 25-126 (204)
25 3i4s_A Histidine triad protein 98.1 7.8E-06 2.7E-10 73.7 8.6 69 181-254 25-102 (149)
26 1z84_A Galactose-1-phosphate u 98.1 0.00032 1.1E-08 71.2 20.6 75 182-256 88-194 (351)
27 1gup_A Galactose-1-phosphate u 92.9 0.98 3.4E-05 45.3 12.7 74 183-256 72-174 (348)
28 3bl9_A Scavenger mRNA-decappin 91.9 0.77 2.6E-05 45.7 10.2 71 182-255 163-248 (301)
29 1vlr_A MRNA decapping enzyme; 91.0 0.96 3.3E-05 45.8 9.8 71 182-255 210-295 (350)
30 2pof_A CDP-diacylglycerol pyro 90.8 0.18 6E-06 48.3 4.1 70 181-254 38-122 (227)
No 1
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.32 E-value=1.5e-12 Score=124.68 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=82.3
Q ss_pred ccccccCCCCCCcccccCC----------CcceeEEeecCCCCccccCCCCCcccCCCceEEEEcCCCCCCCeEEEeccc
Q 012827 134 VDKVLQPFDGNKFNFTKVG----------QEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRV 203 (455)
Q Consensus 134 ~~~~~~pFd~~~FnF~K~~----------~eE~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~vllN~~Pi~~gH~LlVP~~ 203 (455)
++.|..-|+|||..|.+.. .+.|+||--..+.+... .+.++++.+++++|.||+.+||+||||++
T Consensus 39 ~~~m~~l~~p~r~~y~~~~~~~~~~~~~~~~~CiFC~i~~~e~~~~-----~iV~edd~~~afld~~P~~pGH~LVIPkr 113 (218)
T 3ano_A 39 RDQLQRLWTPYRMNYLAEAPVKRDPNSSASPAQPFTEIPQLSDEEG-----LVVARGKLVYAVLNLYPYNPGHLMVVPYR 113 (218)
T ss_dssp CCSCCCCCCCCC-------------------CCHHHHGGGSCHHHH-----TEEEECSSEEEEECSSCSSTTCEEEEESS
T ss_pred CchhhhcccchHHHHhcCCCcccccccCCCCCCcCcccccCCCCCc-----eEEEECCcEEEEEccCCCCCcEEEEEech
Confidence 5789999999999987632 24699985433211111 12357888999999999999999999997
Q ss_pred CcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCC-CeeEEEEEec
Q 012827 204 LECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATI-NHLHFQAYYM 254 (455)
Q Consensus 204 ~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv-~HlHfQ~~~l 254 (455)
+......|+.+++..+.++++. ...+||++++|. ..||++| .|+|+|+++.
T Consensus 114 Hv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~g~ni~~n~G~~aGq~V~~HlHiHIIPR 174 (218)
T 3ano_A 114 RVSELEDLTDLESAELMAFTQKAIRVIKNVSRPHGFNVGLNLGTSAGGSLAEHLHVHVVPR 174 (218)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCSEEEEEEEESGGGTCTTTTSCCEEEEEE
T ss_pred hhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCcccCEEEEEEEcc
Confidence 6666667888776666555443 235699999998 7788999 9999999986
No 2
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.24 E-value=4.3e-12 Score=109.92 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=60.8
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHH---HHHHHHHHH----HH--hCCCCeEEEEec-CCCCCCCCe
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRD---SFLLALYMA----AE--AGNPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~---~l~~~~~l~----~~--~~~~gf~vfyNs-~gAgASv~H 246 (455)
.++++..++++|.+|+.|||+||||+++......|+++ .+..++..+ +. .+.+|||+++|. ..||+||+|
T Consensus 20 v~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~g~ni~~n~g~~agq~V~H 99 (119)
T 3n1s_A 20 VYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYH 99 (119)
T ss_dssp EEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTTCEEEEEEEHHHHTCCSSS
T ss_pred EEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCCcCCCcCE
Confidence 35677899999999999999999999765555567766 333333333 32 235799999999 788999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|+++.
T Consensus 100 lH~Hiipr 107 (119)
T 3n1s_A 100 IHMHLLGG 107 (119)
T ss_dssp CCEEEEES
T ss_pred EEEEEeCC
Confidence 99999986
No 3
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.18 E-value=1.2e-11 Score=106.58 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=60.5
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHH---HHHHHHHHHH----HhC--CCCeEEEEec-CCCCCCCCe
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRD---SFLLALYMAA----EAG--NPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~---~l~~~~~l~~----~~~--~~gf~vfyNs-~gAgASv~H 246 (455)
.++++.+++++|.+|+.+||+||||+++......|+++ ++..++..++ ... .+||++++|. ..||+|++|
T Consensus 21 v~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~~~ni~~n~g~~agq~v~H 100 (119)
T 4egu_A 21 VYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQTGFRVINNCGSDGGQEVKH 100 (119)
T ss_dssp EEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHHCEEEEEEETTTTTCCSCS
T ss_pred EEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCCCCCCcCE
Confidence 45678899999999999999999999765555557654 3434433333 222 3589999999 889999999
Q ss_pred eEEEEEecC
Q 012827 247 LHFQAYYMA 255 (455)
Q Consensus 247 lHfQ~~~l~ 255 (455)
+|+|+++..
T Consensus 101 lH~Hiip~~ 109 (119)
T 4egu_A 101 LHYHILAGK 109 (119)
T ss_dssp CCEEEEESS
T ss_pred EEEEEeCCc
Confidence 999999863
No 4
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.17 E-value=4.8e-11 Score=106.52 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=63.8
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCeeE
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINHLH 248 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~HlH 248 (455)
++++.++++++.+|+.+||+||||+++......|+++++..++.+++. .+.+||++++|. ..||+++.|+|
T Consensus 17 ~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~agq~v~HlH 96 (147)
T 1fit_A 17 LKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVH 96 (147)
T ss_dssp EECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCCSSSCC
T ss_pred EECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCccEEE
Confidence 356778999999999999999999976666666888877766665554 235799999998 77899999999
Q ss_pred EEEEecC
Q 012827 249 FQAYYMA 255 (455)
Q Consensus 249 fQ~~~l~ 255 (455)
+|+++..
T Consensus 97 ~HiiPr~ 103 (147)
T 1fit_A 97 VHVLPRK 103 (147)
T ss_dssp EEEEEEC
T ss_pred EEEECCc
Confidence 9999863
No 5
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.16 E-value=4.5e-11 Score=102.78 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=60.0
Q ss_pred cccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHH---HHHHHHHHH----HHhCCCCeEEEEec-CCCCCCCCee
Q 012827 176 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRD---SFLLALYMA----AEAGNPYFRLGYNS-LGAFATINHL 247 (455)
Q Consensus 176 ~~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~---~l~~~~~l~----~~~~~~gf~vfyNs-~gAgASv~Hl 247 (455)
+.++++..++++|.+|+.+||+||||+++......|+++ .+..++..+ +..-.+||++++|. ..||+|+.|+
T Consensus 23 iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g~ni~~n~g~~agq~v~H~ 102 (117)
T 3oj7_A 23 IVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEGYRVVNNIGEDAGQTVKHI 102 (117)
T ss_dssp EEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTCEEEECCCSTTTTCCSSSC
T ss_pred EEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCCCCCeeeeEE
Confidence 345678899999999999999999999765555567654 333333322 22113599999999 8899999999
Q ss_pred EEEEEec
Q 012827 248 HFQAYYM 254 (455)
Q Consensus 248 HfQ~~~l 254 (455)
|+|+++.
T Consensus 103 H~Hiipr 109 (117)
T 3oj7_A 103 HFHILGG 109 (117)
T ss_dssp CEEEEES
T ss_pred EEEEeCC
Confidence 9999986
No 6
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.15 E-value=8.3e-11 Score=105.54 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=64.2
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH---------hCCCCeEEEEec-CCCCCCCCe
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE---------AGNPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~---------~~~~gf~vfyNs-~gAgASv~H 246 (455)
.++++..++++|.+|+.+||+||||+++......|+++++..++.+++. .+.+||++++|. ..||++|.|
T Consensus 22 v~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~ni~~n~g~~aGq~v~H 101 (149)
T 3o0m_A 22 IYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFH 101 (149)
T ss_dssp EEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCSEEEEECCCSGGGTCCSSS
T ss_pred EEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCCCccce
Confidence 4567889999999999999999999976555566888877666655543 245799999999 778999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|++++
T Consensus 102 lHiHiiPR 109 (149)
T 3o0m_A 102 IHLHVVPR 109 (149)
T ss_dssp CCEEEEEE
T ss_pred EEEEEECC
Confidence 99999986
No 7
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.14 E-value=5.2e-11 Score=108.65 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=64.4
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCee
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINHL 247 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~Hl 247 (455)
.++++.+++++|.+|+.+||+||||+++......|+++++..++.+++. .+.+||++++|. ..||++|.|+
T Consensus 45 V~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~Hl 124 (161)
T 3lb5_A 45 VYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHL 124 (161)
T ss_dssp EEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEESGGGTCCSCSC
T ss_pred EEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCCCEE
Confidence 4567889999999999999999999976555566888877666555543 246799999998 8889999999
Q ss_pred EEEEEec
Q 012827 248 HFQAYYM 254 (455)
Q Consensus 248 HfQ~~~l 254 (455)
|+|++++
T Consensus 125 HiHiiPR 131 (161)
T 3lb5_A 125 HFHIIPR 131 (161)
T ss_dssp CEEEEEE
T ss_pred EEEEEcc
Confidence 9999986
No 8
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.12 E-value=5.3e-11 Score=103.95 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=60.1
Q ss_pred cccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHH---HHHHH----HHHHHhCC-CCeEEEEec-CCCCCCCCe
Q 012827 176 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDS---FLLAL----YMAAEAGN-PYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 176 ~~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~---l~~~~----~l~~~~~~-~gf~vfyNs-~gAgASv~H 246 (455)
+.++++..++++|.+|+.+||+||||+++......|++++ +..++ ++++.... +||++++|. ..||+||+|
T Consensus 31 iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~g~ni~~n~g~~agq~v~H 110 (126)
T 3o1c_A 31 IIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYH 110 (126)
T ss_dssp EEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEECCCHHHHTCCSSS
T ss_pred EEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCccCCccCE
Confidence 3457888999999999999999999997655545566543 33333 33333333 599999999 788999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|+++.
T Consensus 111 lH~Hiipr 118 (126)
T 3o1c_A 111 VHLHVLGG 118 (126)
T ss_dssp CCEEEEES
T ss_pred eEEEEeCC
Confidence 99999986
No 9
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.12 E-value=1e-10 Score=104.65 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=64.9
Q ss_pred cccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCe
Q 012827 176 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 176 ~~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~H 246 (455)
+.++++..++++|.+|+.|||+||||+++......|+++++..++.+++. .+.+||++++|. ..||++|.|
T Consensus 25 iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~aGq~v~H 104 (147)
T 3imi_A 25 KVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFH 104 (147)
T ss_dssp EEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSS
T ss_pred EEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCcccCCCcCE
Confidence 34578889999999999999999999976555566888877666555543 346799999998 888999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|++++
T Consensus 105 lHiHiiPR 112 (147)
T 3imi_A 105 FHLHLIPR 112 (147)
T ss_dssp CCEEEEEE
T ss_pred EEEEEeCC
Confidence 99999986
No 10
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.12 E-value=1.8e-10 Score=103.77 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=64.9
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHHh--------CCCCeEEEEec-CCCCCCCCee
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEA--------GNPYFRLGYNS-LGAFATINHL 247 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~~--------~~~gf~vfyNs-~gAgASv~Hl 247 (455)
.++++..++++|.+|+.+||+||||+++......|+++++..++.+++.+ +.+||++++|. ..||++++|+
T Consensus 28 V~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~v~Hl 107 (149)
T 3ksv_A 28 VAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVPHV 107 (149)
T ss_dssp EEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSTTTTCCSSSC
T ss_pred EEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEecCcccCCCCCEE
Confidence 35677899999999999999999999766555668888777776666542 34689999999 8889999999
Q ss_pred EEEEEec
Q 012827 248 HFQAYYM 254 (455)
Q Consensus 248 HfQ~~~l 254 (455)
|+|++++
T Consensus 108 HiHiiPR 114 (149)
T 3ksv_A 108 HFHIIPK 114 (149)
T ss_dssp CEEEEEE
T ss_pred EEEEEec
Confidence 9999986
No 11
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.11 E-value=3.2e-11 Score=107.10 Aligned_cols=78 Identities=14% Similarity=0.069 Sum_probs=62.6
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCee
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINHL 247 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~Hl 247 (455)
.++++.++++++.+|+.+||+||||+++......|+++++..++.+++. .+.+||++++|. ..+|+++.|+
T Consensus 22 v~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~g~~v~Hl 101 (145)
T 1y23_A 22 VYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHY 101 (145)
T ss_dssp EEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSSC
T ss_pred EEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCcCCCCCcCEE
Confidence 3567889999999999999999999976666666788766555443332 345799999998 7789999999
Q ss_pred EEEEEec
Q 012827 248 HFQAYYM 254 (455)
Q Consensus 248 HfQ~~~l 254 (455)
|+|++++
T Consensus 102 H~HiiPr 108 (145)
T 1y23_A 102 HMHIIPR 108 (145)
T ss_dssp CEEEEEE
T ss_pred EEEEEcc
Confidence 9999986
No 12
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.11 E-value=1.4e-10 Score=103.81 Aligned_cols=77 Identities=22% Similarity=0.172 Sum_probs=63.9
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCeeE
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINHLH 248 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~HlH 248 (455)
++++.+++++|.+|+.+||+||||+++......|+++++..++.+++. .+.+||++++|. ..+|+++.|+|
T Consensus 17 ~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~HlH 96 (149)
T 2eo4_A 17 YEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVIFHLH 96 (149)
T ss_dssp EECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSCSCC
T ss_pred EECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCCCCCcCEEE
Confidence 457789999999999999999999976666667888877776655543 245799999998 77899999999
Q ss_pred EEEEec
Q 012827 249 FQAYYM 254 (455)
Q Consensus 249 fQ~~~l 254 (455)
+|++++
T Consensus 97 iHviPr 102 (149)
T 2eo4_A 97 VHIIPT 102 (149)
T ss_dssp EEEEEE
T ss_pred EEEECC
Confidence 999986
No 13
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.05 E-value=2.2e-10 Score=101.10 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=59.9
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHH----HHHHHhCCCCeEEEEecCCCCCCCCeeEEEEE
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLAL----YMAAEAGNPYFRLGYNSLGAFATINHLHFQAY 252 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~----~l~~~~~~~gf~vfyNs~gAgASv~HlHfQ~~ 252 (455)
.++++..++++|.+|+.+||+||||+++......|+++++..++ ++++..+.++|++++|... |+++.|+|+|++
T Consensus 21 v~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~~n~g~-gq~v~HlH~Hii 99 (135)
T 3r6f_A 21 IYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNILQNNGN-HQEVFHVHFHVI 99 (135)
T ss_dssp CEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEECCSSS-SCSSSSCCEEEE
T ss_pred EEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEcCC-CCCccEEEEEEe
Confidence 35678899999999999999999999765545557766544333 3444456679999999833 889999999999
Q ss_pred ec
Q 012827 253 YM 254 (455)
Q Consensus 253 ~l 254 (455)
++
T Consensus 100 PR 101 (135)
T 3r6f_A 100 PF 101 (135)
T ss_dssp EC
T ss_pred cc
Confidence 86
No 14
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.04 E-value=3.4e-10 Score=104.55 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=64.8
Q ss_pred cccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCe
Q 012827 176 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 176 ~~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~H 246 (455)
+.++++.+++++|.+|+.|||+||||+++......|+++++..++.+++. .+.+||++++|. ..||++++|
T Consensus 52 iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~H 131 (173)
T 3l7x_A 52 KVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKADGLNIINNNEETAGQTVFH 131 (173)
T ss_dssp EEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCSEEEEEECCSGGGTCCSCS
T ss_pred EEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCcCE
Confidence 34578889999999999999999999976555566888877666555433 346799999999 888999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|++++
T Consensus 132 lHiHiIPR 139 (173)
T 3l7x_A 132 AHVHLVPR 139 (173)
T ss_dssp CCEEEEEE
T ss_pred EEEEEEec
Confidence 99999986
No 15
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.00 E-value=3.5e-10 Score=101.86 Aligned_cols=78 Identities=23% Similarity=0.270 Sum_probs=59.7
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHH---HHHHHHHHH----HHhC--CCCeEEEEec-CCCCCCCCe
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRD---SFLLALYMA----AEAG--NPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~---~l~~~~~l~----~~~~--~~gf~vfyNs-~gAgASv~H 246 (455)
.++++..++++|.+|+.+||+||||+++......|+++ ++..+++++ +... ..||++++|. ..||+++.|
T Consensus 52 V~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~gyni~~n~g~~aGq~v~H 131 (147)
T 1xqu_A 52 YYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEKGYRLITNCGVAAGQTVFH 131 (147)
T ss_dssp EEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTTCEEEECCCSTTTTCCSCS
T ss_pred EEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCcccCCCccE
Confidence 35677899999999999999999999765555556543 344444433 3333 3499999999 888999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|+++.
T Consensus 132 lHlHiiP~ 139 (147)
T 1xqu_A 132 LHYHLLGG 139 (147)
T ss_dssp CCEEEEES
T ss_pred EEEEEeCC
Confidence 99999985
No 16
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=98.86 E-value=6.6e-09 Score=91.64 Aligned_cols=74 Identities=20% Similarity=0.228 Sum_probs=56.5
Q ss_pred ccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHHh--------CCCCeEEEEecCCCCCCCCeeE
Q 012827 177 DVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEA--------GNPYFRLGYNSLGAFATINHLH 248 (455)
Q Consensus 177 ~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~~--------~~~gf~vfyNs~gAgASv~HlH 248 (455)
.++++..++++|.+|+.+||+||||+++......|+++++..++.+++.+ +.+++ |...||++|.|+|
T Consensus 22 V~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~----n~~~~gq~v~HlH 97 (138)
T 3p0t_A 22 VYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERS----GLIIAGLEVPHLH 97 (138)
T ss_dssp EEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE----EEEECCSSCSSCC
T ss_pred EEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCC----cEEECCcccCEEE
Confidence 45678899999999999999999999765555568888776666665542 33433 3334788999999
Q ss_pred EEEEec
Q 012827 249 FQAYYM 254 (455)
Q Consensus 249 fQ~~~l 254 (455)
+|++++
T Consensus 98 ~HiiPr 103 (138)
T 3p0t_A 98 VHVFPT 103 (138)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999987
No 17
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=98.78 E-value=8.5e-09 Score=106.73 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=65.5
Q ss_pred cccCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCCCCCCe
Q 012827 176 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAFATINH 246 (455)
Q Consensus 176 ~~~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAgASv~H 246 (455)
+.++++..+++++.+|..+||+||||+++......|+++++..++.+++. .+.+||++++|. ..||+++.|
T Consensus 311 iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~~n~~~~~g~~~gq~v~H 390 (440)
T 1ems_A 311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPH 390 (440)
T ss_dssp EEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSSS
T ss_pred EEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCCCccE
Confidence 34678889999999999999999999986666667888877766665554 245799999999 788999999
Q ss_pred eEEEEEec
Q 012827 247 LHFQAYYM 254 (455)
Q Consensus 247 lHfQ~~~l 254 (455)
+|+|+++.
T Consensus 391 lH~Hiipr 398 (440)
T 1ems_A 391 VHIHILPR 398 (440)
T ss_dssp CCEEEEEE
T ss_pred EEEEEeCC
Confidence 99999986
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=98.75 E-value=2.1e-08 Score=90.10 Aligned_cols=74 Identities=8% Similarity=-0.101 Sum_probs=56.9
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEecCCCCCCCCeeEE
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNSLGAFATINHLHF 249 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs~gAgASv~HlHf 249 (455)
++++..+++++.+|+.+||+||||+++......|+++++..++++++. .+.+||++. .+|.++.|+|+
T Consensus 24 ~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g~ni~----~~gq~v~HlHi 99 (154)
T 2oik_A 24 WQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKINLA----SLGNMTPHVHW 99 (154)
T ss_dssp EECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE----ECCSSSCSCEE
T ss_pred EECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEhH----HhCCCCCEEEE
Confidence 467789999999999999999999976666667888776655544443 234566665 46788999999
Q ss_pred EEEecC
Q 012827 250 QAYYMA 255 (455)
Q Consensus 250 Q~~~l~ 255 (455)
|+++..
T Consensus 100 HiiPr~ 105 (154)
T 2oik_A 100 HVIPRF 105 (154)
T ss_dssp EEEEEC
T ss_pred EEeCCC
Confidence 999863
No 19
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=98.70 E-value=3.5e-08 Score=87.67 Aligned_cols=72 Identities=10% Similarity=-0.055 Sum_probs=52.5
Q ss_pred CCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHH--------HhCCCCeEEEEecCCCCCCCCeeEEE
Q 012827 179 ENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAA--------EAGNPYFRLGYNSLGAFATINHLHFQ 250 (455)
Q Consensus 179 ~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~--------~~~~~gf~vfyNs~gAgASv~HlHfQ 250 (455)
+.....+++|++|+.|||+||+|+++...-..|++++...++..+. ..+.++++++ .||++|+|+|+|
T Consensus 18 ~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~----~aGq~V~HlH~H 93 (137)
T 3ohe_A 18 ESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVA----ALGNMVPQLHLH 93 (137)
T ss_dssp ECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE----ECCSSCCSCCEE
T ss_pred ECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe----eccCcCCEEEEE
Confidence 3556899999999999999998886555555577775543433332 2344566555 889999999999
Q ss_pred EEec
Q 012827 251 AYYM 254 (455)
Q Consensus 251 ~~~l 254 (455)
++++
T Consensus 94 viPR 97 (137)
T 3ohe_A 94 HIVR 97 (137)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9986
No 20
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=98.60 E-value=8.2e-08 Score=86.63 Aligned_cols=72 Identities=8% Similarity=-0.050 Sum_probs=52.1
Q ss_pred CCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHH--------HhCCCCeEEEEecCCCCCCCCeeEEE
Q 012827 179 ENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAA--------EAGNPYFRLGYNSLGAFATINHLHFQ 250 (455)
Q Consensus 179 ~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~--------~~~~~gf~vfyNs~gAgASv~HlHfQ 250 (455)
+.....+++|.+|+.|||+||+|+++......|++++...++..+. ..+.++++++ .||++|+|+|+|
T Consensus 18 ~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~----~aGq~V~HlH~H 93 (149)
T 3i24_A 18 NLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIG----ALGNLVPQLHIH 93 (149)
T ss_dssp ECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE----ECCSSCCSCCEE
T ss_pred ECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEh----hhhCCCCEEEEE
Confidence 3556899999999999999988885555555577775544433332 2344565554 589999999999
Q ss_pred EEec
Q 012827 251 AYYM 254 (455)
Q Consensus 251 ~~~l 254 (455)
++++
T Consensus 94 vIPR 97 (149)
T 3i24_A 94 HIAR 97 (149)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9986
No 21
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=98.42 E-value=5.5e-07 Score=91.32 Aligned_cols=76 Identities=13% Similarity=0.045 Sum_probs=59.5
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCC-CeEEEEec-C--CCCCCCC
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNP-YFRLGYNS-L--GAFATIN 245 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~-gf~vfyNs-~--gAgASv~ 245 (455)
++++..+++++.+|+.+||+||||+++......|+.++...+..+++. .+.+ +|++++|. . |++.++.
T Consensus 214 ~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~ 293 (348)
T 1gup_A 214 VETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHW 293 (348)
T ss_dssp EECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTC
T ss_pred EeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCccc
Confidence 467789999999999999999999986666667887766655544432 2444 99999998 3 3446789
Q ss_pred eeEEEEEe
Q 012827 246 HLHFQAYY 253 (455)
Q Consensus 246 HlHfQ~~~ 253 (455)
|+|+|+++
T Consensus 294 HlHiHiiP 301 (348)
T 1gup_A 294 QLHAHFYP 301 (348)
T ss_dssp CCEEEEEC
T ss_pred EEEEEEec
Confidence 99999998
No 22
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=98.41 E-value=6.9e-07 Score=79.05 Aligned_cols=70 Identities=9% Similarity=-0.004 Sum_probs=48.3
Q ss_pred CCceEEEEcCCCCCCCeEEEecc-cCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEecCCCCCCCCeeEEE
Q 012827 180 NSPSVVAINVSPIEYGHVLLIPR-VLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNSLGAFATINHLHFQ 250 (455)
Q Consensus 180 ~~~~~vllN~~Pi~~gH~LlVP~-~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs~gAgASv~HlHfQ 250 (455)
.....+++|.+|+.|| +||||+ ++......|++++...++..+.. .+..|++++ .||++|+|+|+|
T Consensus 21 ~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~----~aGq~V~HlH~H 95 (135)
T 3nrd_A 21 LGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG----ALGNIVRQLHVH 95 (135)
T ss_dssp CSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE----ECCSSCCSCCEE
T ss_pred CCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe----eccCCCCEEEEE
Confidence 4467999999999995 567888 44444445777655434333332 344565444 789999999999
Q ss_pred EEec
Q 012827 251 AYYM 254 (455)
Q Consensus 251 ~~~l 254 (455)
++++
T Consensus 96 viPR 99 (135)
T 3nrd_A 96 VIAR 99 (135)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9986
No 23
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.33 E-value=1.2e-06 Score=88.96 Aligned_cols=77 Identities=12% Similarity=-0.014 Sum_probs=60.1
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEec-CCCC----CCC
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNS-LGAF----ATI 244 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs-~gAg----ASv 244 (455)
++++.+++++..+|..|+|+||||+++......|+.++...+.++++. .+.++|++++|. ..+| .++
T Consensus 229 ~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~yn~~~n~gp~~g~~~~q~v 308 (351)
T 1z84_A 229 DESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTSPLKVTESQLPY 308 (351)
T ss_dssp EECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECCCTTCCGGGGGG
T ss_pred ecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCCccCCCCCCcc
Confidence 356678999999999999999999976666667887766555554442 345699999999 5555 478
Q ss_pred CeeEEEEEec
Q 012827 245 NHLHFQAYYM 254 (455)
Q Consensus 245 ~HlHfQ~~~l 254 (455)
.|+|+|+++.
T Consensus 309 ~HlHiHiiPR 318 (351)
T 1z84_A 309 THWFLQIVPQ 318 (351)
T ss_dssp CCCEEEEEEC
T ss_pred ceEEEEEEcc
Confidence 9999999984
No 24
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.30 E-value=3.2e-07 Score=86.86 Aligned_cols=73 Identities=16% Similarity=0.237 Sum_probs=49.3
Q ss_pred cCCCceEEEEcCCCCCCCeEEEecccCcccCCCCCHH--------HHHHHHHHHH-H-----h-----------CCC---
Q 012827 178 VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRD--------SFLLALYMAA-E-----A-----------GNP--- 229 (455)
Q Consensus 178 ~~~~~~~vllN~~Pi~~gH~LlVP~~~~~~~Q~L~~~--------~l~~~~~l~~-~-----~-----------~~~--- 229 (455)
++++..+++.++||+.+||+||||+. |......+. .+..+..++. . . ...
T Consensus 25 ~edd~~~af~D~~P~a~~H~LVIPk~--h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 25 YYDDDVVLVRDMFPKSKMHLLLMTRD--PHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EECSSEEEEECSSCSSSSEEEEEECC--TTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEcCCEEEEeCCCCCCCccEEEEecc--ccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 45677899999999999999999995 666655421 2333333333 1 1 011
Q ss_pred -CeEEEEecCCCCCCCCeeEEEEEecC
Q 012827 230 -YFRLGYNSLGAFATINHLHFQAYYMA 255 (455)
Q Consensus 230 -gf~vfyNs~gAgASv~HlHfQ~~~l~ 255 (455)
.+++||-+ +.|++|||+|++..+
T Consensus 103 ~~i~~GfHa---~PSm~HLHLHVIS~D 126 (204)
T 3sp4_A 103 NYIKVGFHA---GPSMNNLHLHIMTLD 126 (204)
T ss_dssp TTEEEEEES---SCSSSSCCEEEEESC
T ss_pred eeEeccCCC---CCcccceeEEEeccC
Confidence 35566654 558999999999864
No 25
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=98.10 E-value=7.8e-06 Score=73.68 Aligned_cols=69 Identities=16% Similarity=0.079 Sum_probs=48.4
Q ss_pred CceEEEEcCCCCCCCeEEEeccc-CcccCCCCCHHHHHHHHHHHHH--------hCCCCeEEEEecCCCCCCCCeeEEEE
Q 012827 181 SPSVVAINVSPIEYGHVLLIPRV-LECLPQRIDRDSFLLALYMAAE--------AGNPYFRLGYNSLGAFATINHLHFQA 251 (455)
Q Consensus 181 ~~~~vllN~~Pi~~gH~LlVP~~-~~~~~Q~L~~~~l~~~~~l~~~--------~~~~gf~vfyNs~gAgASv~HlHfQ~ 251 (455)
....|++|..| .++|+||||++ +......|+++++..++..+.. .+..|| |...||++|+|+|+|+
T Consensus 25 p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~----N~~~aGq~V~HlH~Hv 99 (149)
T 3i4s_A 25 PLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKL----NIAALGNLVPQLHVHI 99 (149)
T ss_dssp SSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE----EEEECCSSCCSCCEEE
T ss_pred CceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeE----EEeecCCcCCEEEEEE
Confidence 34678888655 56699999997 4455556777766555444442 233454 5558899999999999
Q ss_pred Eec
Q 012827 252 YYM 254 (455)
Q Consensus 252 ~~l 254 (455)
+++
T Consensus 100 IPR 102 (149)
T 3i4s_A 100 IAR 102 (149)
T ss_dssp EEE
T ss_pred ECC
Confidence 986
No 26
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.06 E-value=0.00032 Score=71.19 Aligned_cols=75 Identities=21% Similarity=0.126 Sum_probs=59.8
Q ss_pred ceEEEEcCCCCCC------------C-----------eEEEecccCcccCCCCCHHHHHHHHHHHHH----hC----CCC
Q 012827 182 PSVVAINVSPIEY------------G-----------HVLLIPRVLECLPQRIDRDSFLLALYMAAE----AG----NPY 230 (455)
Q Consensus 182 ~~~vllN~~Pi~~------------g-----------H~LlVP~~~~~~~Q~L~~~~l~~~~~l~~~----~~----~~g 230 (455)
...++.|+||+.. | ++++.+..+......|+.+.+..++++..+ +. ..+
T Consensus 88 ~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls~~e~~~vi~~~~~~~~~L~~~~~~~y 167 (351)
T 1z84_A 88 KLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINY 167 (351)
T ss_dssp SEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSCHHHHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred eEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCCHHHHHHHHHHHHHHHHHHhcccCCCE
Confidence 4799999999994 4 778888876666678999888877766653 21 358
Q ss_pred eEEEEec-CCCCCCCCeeEEEEEecCC
Q 012827 231 FRLGYNS-LGAFATINHLHFQAYYMAL 256 (455)
Q Consensus 231 f~vfyNs-~gAgASv~HlHfQ~~~l~~ 256 (455)
+.+|-|- ..||||+.|.|.|++-.+.
T Consensus 168 v~iF~N~G~~aGaSl~HpH~QI~a~~~ 194 (351)
T 1z84_A 168 IQVFKNQGASAGASMSHSHSQMMALPV 194 (351)
T ss_dssp EEEEEEESGGGTCCCSSCEEEEEEESS
T ss_pred EEEEEEcCcccCCCCcCccceeEecCc
Confidence 8999999 9999999999999998754
No 27
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=92.94 E-value=0.98 Score=45.35 Aligned_cols=74 Identities=9% Similarity=-0.081 Sum_probs=50.0
Q ss_pred eEEEEcCCCCCCC---------------------eEEEecc-cCcccCCCCCHHHHHHHHHHHHH----h--CCCCeEEE
Q 012827 183 SVVAINVSPIEYG---------------------HVLLIPR-VLECLPQRIDRDSFLLALYMAAE----A--GNPYFRLG 234 (455)
Q Consensus 183 ~~vllN~~Pi~~g---------------------H~LlVP~-~~~~~~Q~L~~~~l~~~~~l~~~----~--~~~gf~vf 234 (455)
..|+-|+||.... |-.||=. .+......|+.+++..+++...+ + .-....+|
T Consensus 72 ~~v~~N~fpal~~~~~~~~~~~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~~yV~iF 151 (348)
T 1gup_A 72 TYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVF 151 (348)
T ss_dssp CEEEECTTCSCCTTCCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred EEEecCCCceeccCCCCccccCccceecCccceeEEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcCCEEEEe
Confidence 5789999998841 3333333 23333346787777666555543 1 12466688
Q ss_pred Eec-CCCCCCCCeeEEEEEecCC
Q 012827 235 YNS-LGAFATINHLHFQAYYMAL 256 (455)
Q Consensus 235 yNs-~gAgASv~HlHfQ~~~l~~ 256 (455)
=|- ..||||..|-|-|++-.+.
T Consensus 152 ~N~G~~~G~Sl~HpH~Qi~a~~~ 174 (348)
T 1gup_A 152 ENKGAAMGCSNPHPGGQIWANSF 174 (348)
T ss_dssp EEESGGGTCSCCSSEEEEEEESS
T ss_pred cccCCcCCcCCCCCceeEEeccc
Confidence 888 9999999999999997754
No 28
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=91.94 E-value=0.77 Score=45.68 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=46.4
Q ss_pred ceEEEEcCC----CCCCCeEEEecccC-cccCCCCCHHHH---HH----HHHHHHHh---CCCCeEEEEecCCCCCCCCe
Q 012827 182 PSVVAINVS----PIEYGHVLLIPRVL-ECLPQRIDRDSF---LL----ALYMAAEA---GNPYFRLGYNSLGAFATINH 246 (455)
Q Consensus 182 ~~~vllN~~----Pi~~gH~LlVP~~~-~~~~Q~L~~~~l---~~----~~~l~~~~---~~~gf~vfyNs~gAgASv~H 246 (455)
+++++-+.. |...-|+|.||++. -.....|+++.+ .. +.+++.+. ....+|+||=-.- |..|
T Consensus 163 gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~rlgfHy~P---S~yH 239 (301)
T 3bl9_A 163 GFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLP---SYYH 239 (301)
T ss_dssp CEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEESSC---SSSS
T ss_pred CEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEecCCC---Ccce
Confidence 467777655 99999999999963 222234665433 22 22333321 2458999999833 6789
Q ss_pred eEEEEEecC
Q 012827 247 LHFQAYYMA 255 (455)
Q Consensus 247 lHfQ~~~l~ 255 (455)
+|+|++...
T Consensus 240 LHlHvis~~ 248 (301)
T 3bl9_A 240 LHVHFTALG 248 (301)
T ss_dssp CEEEEEETT
T ss_pred EEEEEEecC
Confidence 999999864
No 29
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=91.00 E-value=0.96 Score=45.82 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=46.5
Q ss_pred ceEEEEcCC----CCCCCeEEEecccC-cccCCCCCHHHH---HH----HHHHHHHh---CCCCeEEEEecCCCCCCCCe
Q 012827 182 PSVVAINVS----PIEYGHVLLIPRVL-ECLPQRIDRDSF---LL----ALYMAAEA---GNPYFRLGYNSLGAFATINH 246 (455)
Q Consensus 182 ~~~vllN~~----Pi~~gH~LlVP~~~-~~~~Q~L~~~~l---~~----~~~l~~~~---~~~gf~vfyNs~gAgASv~H 246 (455)
+++++-+.. |+..-|+|.||++. ......|+.+.+ .. +.+++.+. ....||+||=-.- |..|
T Consensus 210 gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgfHy~P---S~yH 286 (350)
T 1vlr_A 210 GFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYLHYLP---SYYH 286 (350)
T ss_dssp CEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEESSC---SSSS
T ss_pred CeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEecCCC---Ccce
Confidence 467777655 99999999999963 222234665433 22 22333321 2458999999833 6789
Q ss_pred eEEEEEecC
Q 012827 247 LHFQAYYMA 255 (455)
Q Consensus 247 lHfQ~~~l~ 255 (455)
+|+|++...
T Consensus 287 LHlHvis~~ 295 (350)
T 1vlr_A 287 LHVHFTALG 295 (350)
T ss_dssp CEEEEEETT
T ss_pred EEEEEEecc
Confidence 999999864
No 30
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=90.77 E-value=0.18 Score=48.34 Aligned_cols=70 Identities=24% Similarity=0.196 Sum_probs=47.6
Q ss_pred CceEEEEcCCCCCCCeEEEecccCcc---cCCCC---CHHHHHHHHHH----HHHh----CCCCeEEEEec-CCCCCCCC
Q 012827 181 SPSVVAINVSPIEYGHVLLIPRVLEC---LPQRI---DRDSFLLALYM----AAEA----GNPYFRLGYNS-LGAFATIN 245 (455)
Q Consensus 181 ~~~~vllN~~Pi~~gH~LlVP~~~~~---~~Q~L---~~~~l~~~~~l----~~~~----~~~gf~vfyNs-~gAgASv~ 245 (455)
..++|+-+ +.-+.|+||||..... .|+.+ +++.|..|+.. .... ....+-+..|| .|- |||
T Consensus 38 ~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gR--SQn 113 (227)
T 2pof_A 38 AGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGR--TQN 113 (227)
T ss_dssp TTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGGGC--SCC
T ss_pred CCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCCCc--ccc
Confidence 45677766 7799999999974222 34445 45566666654 2222 23578899999 444 689
Q ss_pred eeEEEEEec
Q 012827 246 HLHFQAYYM 254 (455)
Q Consensus 246 HlHfQ~~~l 254 (455)
|||+|+-.+
T Consensus 114 QLHIHIsCl 122 (227)
T 2pof_A 114 HFHIHISCI 122 (227)
T ss_dssp SCCEEEEEB
T ss_pred ceeeehhhC
Confidence 999999876
Done!