BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012832
(455 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 169/291 (58%), Gaps = 12/291 (4%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
L +L+ T +F +G G FG V+KG + D VA+K E QG E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-------GAKVALKRRTPESSQGIEEFE 83
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRY--SVSLPWSTRMK 187
TE+ L RHPHLV LIG+C E +L+Y+YM G+L+ L+ ++S+ W R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
I +GAA+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E D TH+ V
Sbjct: 144 ICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
GT GY PEY + G LT SDVYSFGVVL E+L R ++ +S P+ +L EWA N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ +L +I+DP L + RK A +CL+ + RP+M V+ LE
Sbjct: 262 NG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 181/312 (58%), Gaps = 17/312 (5%)
Query: 53 SEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPV 112
ED + L L F+L EL+V + +FS+ N LG GGFG V+KG + D V
Sbjct: 15 EEDPEVHLG--QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-------GTLV 65
Query: 113 AVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
AVK L E QG ++ TEV + H +L++L G+C RLLVY YM GS+ +
Sbjct: 66 AVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 125
Query: 172 LFRRYSVSLP--WSTRMKIALGAAKGLAFLHDAEKP-VIYRDFKASNILLDSDYTAKLSD 228
L R P W R +IALG+A+GLA+LHD P +I+RD KA+NILLD ++ A + D
Sbjct: 126 LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 185
Query: 229 FGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
FGLAK + D HV V GT G+ APEY+ TG + +DV+ +GV+LLEL++G+++ D
Sbjct: 186 FGLAK-LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
Query: 289 KSRPQREQS--LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQ 346
+R + L++W + +L + +KL ++D L+G Y + + +A C P +
Sbjct: 245 LARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 303
Query: 347 RPTMSTVVKTLE 358
RP MS VV+ LE
Sbjct: 304 RPKMSEVVRMLE 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 168/291 (57%), Gaps = 12/291 (4%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
L +L+ T +F +G G FG V+KG + D VA+K E QG E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-------GAKVALKRRTPESSQGIEEFE 83
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRY--SVSLPWSTRMK 187
TE+ L RHPHLV LIG+C E +L+Y+YM G+L+ L+ ++S+ W R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
I +GAA+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E TH+ V
Sbjct: 144 ICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
GT GY PEY + G LT SDVYSFGVVL E+L R ++ +S P+ +L EWA N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ +L +I+DP L + RK A +CL+ + RP+M V+ LE
Sbjct: 262 NG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 179/312 (57%), Gaps = 17/312 (5%)
Query: 53 SEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPV 112
ED + L L F+L EL+V + +F + N LG GGFG V+KG + D V
Sbjct: 7 EEDPEVHLG--QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-------GXLV 57
Query: 113 AVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
AVK L E QG ++ TEV + H +L++L G+C RLLVY YM GS+ +
Sbjct: 58 AVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 117
Query: 172 LFRRYSVSLP--WSTRMKIALGAAKGLAFLHDAEKP-VIYRDFKASNILLDSDYTAKLSD 228
L R P W R +IALG+A+GLA+LHD P +I+RD KA+NILLD ++ A + D
Sbjct: 118 LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177
Query: 229 FGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
FGLAK + D HV V G G+ APEY+ TG + +DV+ +GV+LLEL++G+++ D
Sbjct: 178 FGLAK-LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Query: 289 KSRPQREQS--LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQ 346
+R + L++W + +L + +KL ++D L+G Y + + +A C P +
Sbjct: 237 LARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 347 RPTMSTVVKTLE 358
RP MS VV+ LE
Sbjct: 296 RPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 180/318 (56%), Gaps = 25/318 (7%)
Query: 54 EDLSISLAGSNLHVFTLAELKVTTQSFSS------SNFLGEGGFGAVHKGFIDDKLRPGL 107
E+ S+ ++ + H F+ ELK T +F N +GEGGFG V+KG++++
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN------ 54
Query: 108 QAQPVAVKNL----DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYM 163
VAVK L D+ + +++ E+ + + +H +LV+L+G+ + + LVY YM
Sbjct: 55 --TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 164 PRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
P GSL ++L + L W R KIA GAA G+ FLH E I+RD K++NILLD +
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAF 170
Query: 223 TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
TAK+SDFGLA+ + T + +R++GT Y APE + G +T SD+YSFGVVLLE+++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
Query: 283 GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSH 342
G +VD+ R Q L++ + ++ + + +D ++ S T ++A QCL
Sbjct: 230 GLPAVDEHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHE 286
Query: 343 RPKQRPTMSTVVKTLEPL 360
+ +RP + V + L+ +
Sbjct: 287 KKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 179/318 (56%), Gaps = 25/318 (7%)
Query: 54 EDLSISLAGSNLHVFTLAELKVTTQSFSS------SNFLGEGGFGAVHKGFIDDKLRPGL 107
E+ S+ ++ + H F+ ELK T +F N +GEGGFG V+KG++++
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN------ 54
Query: 108 QAQPVAVKNL----DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYM 163
VAVK L D+ + +++ E+ + + +H +LV+L+G+ + + LVY YM
Sbjct: 55 --TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 164 PRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
P GSL ++L + L W R KIA GAA G+ FLH E I+RD K++NILLD +
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAF 170
Query: 223 TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
TAK+SDFGLA+ + T + R++GT Y APE + G +T SD+YSFGVVLLE+++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
Query: 283 GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSH 342
G +VD+ R Q L++ + ++ + + +D ++ S T ++A QCL
Sbjct: 230 GLPAVDEHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHE 286
Query: 343 RPKQRPTMSTVVKTLEPL 360
+ +RP + V + L+ +
Sbjct: 287 KKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 174/312 (55%), Gaps = 25/312 (8%)
Query: 60 LAGSNLHVFTLAELKVTTQSFSS------SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVA 113
++ + H F+ ELK T +F N +GEGGFG V+KG++++ VA
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVA 52
Query: 114 VKNL----DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLE 169
VK L D+ + +++ E+ + + +H +LV+L+G+ + + LVY YMP GSL
Sbjct: 53 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 112
Query: 170 NQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSD 228
++L + L W R KIA GAA G+ FLH E I+RD K++NILLD +TAK+SD
Sbjct: 113 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISD 170
Query: 229 FGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
FGLA+ + + R++GT Y APE + G +T SD+YSFGVVLLE+++G +VD
Sbjct: 171 FGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
Query: 289 KSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRP 348
+ R Q L++ + ++ + + +D ++ S T ++A QCL + +RP
Sbjct: 230 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRP 286
Query: 349 TMSTVVKTLEPL 360
+ V + L+ +
Sbjct: 287 DIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 25/307 (8%)
Query: 63 SNLHVFTLAELKVTTQSFSS------SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN 116
+ H F+ ELK T +F N GEGGFG V+KG++++ VAVK
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--------TVAVKK 52
Query: 117 L----DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL 172
L D+ + +++ E+ + +H +LV+L+G+ + + LVY Y P GSL ++L
Sbjct: 53 LAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
Query: 173 -FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL 231
+ L W R KIA GAA G+ FLH E I+RD K++NILLD +TAK+SDFGL
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 232 AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSR 291
A+ + +R++GT Y APE + G +T SD+YSFGVVLLE+++G +VD+ R
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 292 PQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMS 351
Q L++ + ++ + + +D + S T ++A QCL + +RP +
Sbjct: 230 --EPQLLLDIKEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 352 TVVKTLE 358
V + L+
Sbjct: 287 KVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 31/279 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR--EWLTEVIFLGQLRHPHL 143
+G G FG VH R VAVK L + R E+L EV + +LRHP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYS-VSLPWSTRMKIALGAAKGLAFLHDA 202
V +G + + +V EY+ RGSL L + + L R+ +A AKG+ +LH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTG 262
P+++RD K+ N+L+D YT K+ DFGL++ + S GT + APE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR-LE 321
SDVYSFGV+L EL + ++ P + + V + K R+ PR L
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---------KCKRLEIPRNLN 265
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
Q AA+ C ++ P +RP+ +T++ L PL
Sbjct: 266 PQ--------VAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR--EWLTEVIFLGQLRHPHL 143
+G G FG VH R VAVK L + R E+L EV + +LRHP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYS-VSLPWSTRMKIALGAAKGLAFLHDA 202
V +G + + +V EY+ RGSL L + + L R+ +A AKG+ +LH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVMT 261
P+++R+ K+ N+L+D YT K+ DFGL++ T +S++ GT + APE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR-L 320
SDVYSFGV+L EL + ++ P + + V + K R+ PR L
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---------KCKRLEIPRNL 264
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
Q AA+ C ++ P +RP+ +T++ L PL
Sbjct: 265 NPQ--------VAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 13 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV+E+M G L + L R T + + L +G+A+L +A
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 121
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 177
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 226
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPLKD 362
A+ YQ ++H RP+ RP S +++ L + +
Sbjct: 227 ---------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV+E+M G L + L R T + + L +G+A+L +A
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--S 123
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 179
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 228
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPL 360
A+ YQ ++H RP+ RP S +++ L +
Sbjct: 229 ---------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 18 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV+E+M G L + L R T + + L +G+A+L +A
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 126
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 182
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 231
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPLKD 362
A+ YQ ++H RP+ RP S +++ L + +
Sbjct: 232 ---------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV+E+M G L + L R T + + L +G+A+L +A
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 123
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 179
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 228
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPLKD 362
A+ YQ ++H RP+ RP S +++ L + +
Sbjct: 229 ---------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 35 IGSGQFGLVHLGY-------WLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV+E+M G L + L R T + + L +G+A+L +A
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 143
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 199
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 248
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPLKD 362
A+ YQ ++H RP+ RP S +++ L + +
Sbjct: 249 ---------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 42/284 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH G+ L VA+K + EG +++ E + +L HP LV+
Sbjct: 16 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C E+ LV E+M G L + L R T + + L +G+A+L +A
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 124
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
VI+RD A N L+ + K+SDFG+ + DD + S+ GT+ +A+PE
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSS--TGTKFPVKWASPEVFSFS 180
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV+SFGV++ E+ S K ++R E ++ D R+ PRL
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL-- 229
Query: 323 QYSETGARKAAALAYQCLSH----RPKQRPTMSTVVKTLEPLKD 362
A+ YQ ++H RP+ RP S +++ L + +
Sbjct: 230 ---------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 30/283 (10%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
+G+GGFG VHKG + DK +++ + + E ++ +E+ EV + L HP++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
KL G +V E++P G L ++L + + + WS ++++ L A G+ ++ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 205 PVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
P+++RD ++ NI L S AK++DFGL++ H + ++G + APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 260 MTGH--LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
T +D YSF ++L +L+G D+ + + +N R+ G
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--------FINMIREEG---- 246
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L E + + C S PK+RP S +VK L L
Sbjct: 247 --LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 41/317 (12%)
Query: 71 AELKVTTQ----SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
A LK TT+ + +G G FG V+KG + K G + PVA+K L + R
Sbjct: 33 AVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGML--KTSSGKKEVPVAIKTLKAGYTEKQR 90
Query: 127 -EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR 185
++L E +GQ H ++++L G + + +++ EYM G+L ++ R
Sbjct: 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQL 149
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTH 242
+ + G A G+ +L A ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 150 VGMLRGIAAGMKYL--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
++ + APE + TS SDV+SFG+V+ E+++ + RP E S E
Sbjct: 208 SGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE-----RPYWELSNHEVM 260
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK------- 355
+ +ND +L MD L QC +RP + +V
Sbjct: 261 KA-INDGFRLPTPMD----------CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
Query: 356 ---TLEPLKDFDDDIAI 369
+L+ L DFD ++I
Sbjct: 310 APDSLKTLADFDPRVSI 326
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
+G+GGFG VHKG + DK +++ + + E ++ +E+ EV + L HP++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
KL G +V E++P G L ++L + + + WS ++++ L A G+ ++ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 205 PVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
P+++RD ++ NI L S AK++DFG ++ H + ++G + APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 260 MTGH--LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
T +D YSF ++L +L+G D+ + + +N R+ G
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--------FINMIREEG---- 246
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L E + + C S PK+RP S +VK L L
Sbjct: 247 --LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
+G+GGFG VHKG + DK +++ + + E ++ +E+ EV + L HP++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
KL G +V E++P G L ++L + + + WS ++++ L A G+ ++ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 205 PVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
P+++RD ++ NI L S AK++DF L++ H + ++G + APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 260 MTGH--LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
T +D YSF ++L +L+G D+ + + +N R+ G
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--------FINMIREEG---- 246
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L E + + C S PK+RP S +VK L L
Sbjct: 247 --LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KL VAVK + EG E+ E + +L HP LVK
Sbjct: 16 LGSGQFGVV-------KLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVK 67
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
G C +E +V EY+ G L N L R + L S +++ +G+AFL +
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ-- 124
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
I+RD A N L+D D K+SDFG+ + DD +VS+ +GT+ ++APE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEVFHYF 180
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SDV++FG+++ E+ S K E L + R+ P L
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL---------KVSQGHRLYRPHL-- 229
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKDFD 364
+ + Y C P++RPT ++ ++EPL++ D
Sbjct: 230 -----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
VF E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 61
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 224
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQY---SETGARKAAALAYQCLSHRPKQRPTMSTVV 354
L E L++ + L +MD G Y + + L C PK RPT +V
Sbjct: 225 LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 355 KTLE 358
L+
Sbjct: 281 NLLK 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLGQLRHPHLV 144
LGEG FG V + D G + VAVK L + HR W E+ L L H H++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 145 KLIGYCCE---EEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
K G CCE E+ LV EY+P GSL + L R+S+ L + + A +G+A+LH
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQQICEGMAYLHS 135
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYV 259
I+R+ A N+LLD+D K+ DFGLAK PEG + + R G + APE +
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECL 192
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
VF E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 227
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQY---SETGARKAAALAYQCLSHRPKQRPTMSTVV 354
L E L++ + L +MD G Y + + L C PK RPT +V
Sbjct: 228 LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 355 KTLE 358
L+
Sbjct: 284 NLLK 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLGQLRHPHLV 144
LGEG FG V + D G + VAVK L + HR W E+ L L H H++
Sbjct: 39 LGEGHFGKVSL-YCYDPTNDG-TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 145 KLIGYCCEEEHRL---LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
K G CCE+ LV EY+P GSL + L R+S+ L + + A +G+A+LH
Sbjct: 97 KYKG-CCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQQICEGMAYLH- 151
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYV 259
+ I+RD A N+LLD+D K+ DFGLAK PEG + + R G + APE +
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-RVREDGDSPVFWYAPECL 209
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLGQLRHPHLV 144
LGEG FG V + D G + VAVK L + HR W E+ L L H H++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 145 KLIGYCCE---EEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
K G CCE E+ LV EY+P GSL + L R+S+ L + + A +G+A+LH
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQQICEGMAYLH- 134
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYV 259
+ I+R+ A N+LLD+D K+ DFGLAK PEG + + R G + APE +
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECL 192
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGLA+ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 149
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 152
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 156
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 152
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 151
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 210
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 271 QKFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ FL A
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--AS 151
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E D H T + A E + T
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%)
Query: 62 GSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG 121
GS V A+ ++ + S +G G FG V G + KL P + VA+K L +
Sbjct: 1 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGY 56
Query: 122 LQGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL 180
+ R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQF 115
Query: 181 PWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPE 237
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 174 AAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%)
Query: 62 GSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG 121
GS V A+ ++ + S +G G FG V G + KL P + VA+K L +
Sbjct: 18 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGY 73
Query: 122 LQGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL 180
+ R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQF 132
Query: 181 PWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPE 237
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 133 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 191 AAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 28/301 (9%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
VF E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 227
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
L E L++ + L +MD Q + + L C PK RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 358 E 358
+
Sbjct: 287 K 287
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 33 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 86
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 145
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 146 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 204 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V EYM GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL + D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 46/305 (15%)
Query: 64 NLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+LH+ E++V +G G FG V K K R A+ VA+K ++ E +
Sbjct: 2 SLHMIDYKEIEV-------EEVVGRGAFGVVCKA----KWR----AKDVAIKQIESESER 46
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ ++ E+ L ++ HP++VKL G C LV EY GSL N L + LP+
Sbjct: 47 --KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHG--AEPLPYY 100
Query: 184 TR---MKIALGAAKGLAFLHDAE-KPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEG 238
T M L ++G+A+LH + K +I+RD K N+LL + T K+ DFG A D
Sbjct: 101 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD---- 156
Query: 239 DDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSL 298
TH+ T G+ + APE + + DV+S+G++L E+++ RK D
Sbjct: 157 IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---------- 205
Query: 299 VEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
E P + P L + + +L +C S P QRP+M +VK +
Sbjct: 206 -EIGGPAFRIMWAVHNGTRPPL----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 260
Query: 359 PLKDF 363
L +
Sbjct: 261 HLMRY 265
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 138/304 (45%), Gaps = 34/304 (11%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
V+ E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 227
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQY---SETGARKAAALAYQCLSHRPKQRPTMSTVV 354
L E L++ + L +MD G Y + + L C P RPT +V
Sbjct: 228 LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 355 KTLE 358
L+
Sbjct: 284 NLLK 287
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 46/305 (15%)
Query: 64 NLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+LH+ E++V +G G FG V K K R A+ VA+K ++ E +
Sbjct: 1 SLHMIDYKEIEV-------EEVVGRGAFGVVCKA----KWR----AKDVAIKQIESESER 45
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ ++ E+ L ++ HP++VKL G C LV EY GSL N L + LP+
Sbjct: 46 --KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHG--AEPLPYY 99
Query: 184 TR---MKIALGAAKGLAFLHDAE-KPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEG 238
T M L ++G+A+LH + K +I+RD K N+LL + T K+ DFG A D
Sbjct: 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD---- 155
Query: 239 DDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSL 298
TH+ T G+ + APE + + DV+S+G++L E+++ RK D
Sbjct: 156 IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---------- 204
Query: 299 VEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
E P + P L + + +L +C S P QRP+M +VK +
Sbjct: 205 -EIGGPAFRIMWAVHNGTRPPL----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
Query: 359 PLKDF 363
L +
Sbjct: 260 HLMRY 264
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 12/213 (5%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEV 132
++ + +G G FG V G + KL PG + PVA+K L + + R ++L E
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRL--KL-PGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
+GQ HP+++ L G + + ++V EYM GSL+ ++ + + G
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT-FLKKNDGQFTVIQLVGMLRGI 133
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVMG 249
+ G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T ++
Sbjct: 134 SAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 189
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + TS SDV+S+G+V+ E++S
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
L++ + +G GGFG V++ F I D++ A A + D + Q E
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEV-----AVKAARHDPDEDISQTIENVRQE 56
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
L+HP+++ L G C +E + LV E+ G L L + +P + A+
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQ 113
Query: 192 AAKGLAFLHD-AEKPVIYRDFKASNILLD--------SDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +LHD A P+I+RD K+SNIL+ S+ K++DFGLA++ H
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE------WH 167
Query: 243 VSTRVMGTQGYA--APEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVE 300
+T++ YA APE + + SDV+S+GV+L ELL+G
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF------------- 214
Query: 301 WARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
R + A G M+ +L T A L C + P RP+ + ++ L
Sbjct: 215 --RGIDGLAVAYGVAMN-KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLV 144
LGEG FG V + D G + VAVK L + G Q W E+ L L H H+V
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 145 KLIGYCCE---EEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
K G CCE E+ LV EY+P GSL + L R+ V L + + A +G+A+LH
Sbjct: 75 KYKG-CCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGL--AQLLLFAQQICEGMAYLH- 129
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYV 259
+ I+R A N+LLD+D K+ DFGLAK PEG + + R G + APE +
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECL 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLV 144
LGEG FG V + D G + VAVK L + G Q W E+ L L H H+V
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 145 KLIGYCCE---EEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
K G CCE E+ LV EY+P GSL + L R+ V L + + A +G+A+LH
Sbjct: 74 KYKG-CCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGL--AQLLLFAQQICEGMAYLH- 128
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYV 259
+ I+R A N+LLD+D K+ DFGLAK PEG + + R G + APE +
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECL 186
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V E M GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 150
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 133/314 (42%), Gaps = 40/314 (12%)
Query: 42 VDLSNPSSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDD 101
V L NP L + SL VF + E LGEG +G+V+K +
Sbjct: 5 VQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEK------------LGEGSYGSVYKAIHKE 52
Query: 102 KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYE 161
Q VA+K + +E +E + E+ + Q PH+VK G + +V E
Sbjct: 53 T------GQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104
Query: 162 YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD 221
Y GS+ + + R + +L I KGL +LH K I+RD KA NILL+++
Sbjct: 105 YCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTE 161
Query: 222 YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
AKL+DFG+A G D V+GT + APE + ++D++S G+ +E+
Sbjct: 162 GHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA 219
Query: 282 SGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLS 341
G+ P R ++ +P + E + QCL
Sbjct: 220 EGKPPYADIHPMRAIFMIP---------------TNPPPTFRKPELWSDNFTDFVKQCLV 264
Query: 342 HRPKQRPTMSTVVK 355
P+QR T + +++
Sbjct: 265 KSPEQRATATQLLQ 278
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 86 LGEGGFGAVHKGFIDD--KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LGEG FG V F+ + L P VAVK L L +++ E L L+H H+
Sbjct: 23 LGEGAFGKV---FLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLF--------------RRYSVSLPWSTRMKIA 189
VK G C + + ++V+EYM G L L R+ L S + IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A G+ +L A + ++RD N L+ ++ K+ DFG+++D D V M
Sbjct: 140 SQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA 309
+ PE +M T+ SDV+SFGV+L E+ + K Q + + + +
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK----------QPWFQLSNTEVIEC 247
Query: 310 RKLGRIMD-PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
GR+++ PR+ ++ + C P+QR + + K L L
Sbjct: 248 ITQGRVLERPRV-------CPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 62 GSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG 121
GS V A+ ++ + S +G G FG V G + KL P + VA+K L +
Sbjct: 1 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGY 56
Query: 122 LQGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL 180
+ R ++L E +GQ HP++++L G + + ++V E M GSL++ R++
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQF 115
Query: 181 PWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPE 237
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 174 AAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
VF E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
+ + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 227
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
L E L++ + L +MD Q + + L C PK RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 358 E 358
+
Sbjct: 287 K 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 15/222 (6%)
Query: 65 LHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG 124
+H F EL T + S +G G FG V G + KL P + VA+K L + +
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRL--KL-PSKKEISVAIKTLKVGYTEK 88
Query: 125 HR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
R ++L E +GQ HP++++L G + + ++V E M GSL++ R++
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQFTVI 147
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDD 240
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE
Sbjct: 148 QLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
T ++ + +PE + TS SDV+S+G+VL E++S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L+ A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLN-ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 227
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 228 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 285 ISSIKEEMEP 294
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 45 SNPSSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNF---LGEGGFGAVHKGFIDD 101
S+ SS L + I L+ N + + V S +F +G G FG V+ G + D
Sbjct: 12 SDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 71
Query: 102 KLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR-LLV 159
+ AVK+L+ + + ++LTE I + HP+++ L+G C E L+V
Sbjct: 72 NDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 128
Query: 160 YEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
YM G L N R + + + L AKG+ +L A K ++RD A N +LD
Sbjct: 129 LPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLD 185
Query: 220 SDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVL 277
+T K++DFGLA+D E H T + A E + T T+ SDV+SFGV+L
Sbjct: 186 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 245
Query: 278 LELLS 282
EL++
Sbjct: 246 WELMT 250
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 84 NFLGEGGFGAVHKGFIDDKLR-PGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHP 141
+G G G V G +LR PG + PVA+K L + R ++L+E +GQ HP
Sbjct: 55 KIIGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
++++L G ++V EYM GSL+ R + + + G G+ +L D
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVMGTQGYAAPEY 258
++RD A N+L+DS+ K+SDFGL++ D P+ T ++ + APE
Sbjct: 170 LG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEA 225
Query: 259 VMTGHLTSMSDVYSFGVVLLELLS 282
+ +S SDV+SFGVV+ E+L+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S VF E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 59
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 224
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 225 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 281
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 282 ISSIKEEMEP 291
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGHREWLTEVIFLGQLRHPHLV 144
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP------WSTRMKIALGAAKGL 196
+L+G + + L+V E M G L++ L R + + P +++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E D + + + AP
Sbjct: 143 AYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
E + G T+ SD++SFGVVL E+ SL E L++ + L +M
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 245
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
D Q + + L C PK RPT +V L+
Sbjct: 246 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 32/301 (10%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLT 130
E +V + + S LG+G FG V++G ++ + + VA+K ++ R E+L
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 62
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRRYSVSLP--W 182
E + + H+V+L+G + + L++ E M RG L++ L V P
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +D E D
Sbjct: 123 SKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+ + + +PE + G T+ SDV+SFGVVL E+ +L E
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQP 225
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT----MSTVVKTLE 358
L++ + L +M+ L + + L C + PK RP+ +S++ + +E
Sbjct: 226 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
Query: 359 P 359
P
Sbjct: 285 P 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 116/242 (47%), Gaps = 13/242 (5%)
Query: 48 SSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNF---LGEGGFGAVHKGFIDDKLR 104
SS L + I L+ N + + V S +F +G G FG V+ G + D
Sbjct: 16 SSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDG 75
Query: 105 PGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR-LLVYEY 162
+ AVK+L+ + + ++LTE I + HP+++ L+G C E L+V Y
Sbjct: 76 KKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 132
Query: 163 MPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
M G L N R + + + L AKG+ +L A K ++RD A N +LD +
Sbjct: 133 MKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKF 189
Query: 223 TAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLEL 280
T K++DFGLA+D E H T + A E + T T+ SDV+SFGV+L EL
Sbjct: 190 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
Query: 281 LS 282
++
Sbjct: 250 MT 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 151
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 84 NFLGEGGFGAVHKGFIDDKLR-PGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHP 141
+G G G V G +LR PG + PVA+K L + R ++L+E +GQ HP
Sbjct: 55 KIIGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
++++L G ++V EYM GSL+ R + + + G G+ +L D
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVMGTQGYAAPEY 258
++RD A N+L+DS+ K+SDFGL++ D P+ T ++ + APE
Sbjct: 170 LG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEA 225
Query: 259 VMTGHLTSMSDVYSFGVVLLELLS 282
+ +S SDV+SFGVV+ E+L+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 151
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG--AAKGLAFLHD 201
L+G C E L+V YM G L N F R P + + I G AKG+ +L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 148
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYV 259
A K ++RD A N +LD +T K++DFGLA+D E H T + A E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 260 MTGHLTSMSDVYSFGVVLLELLS 282
T T+ SDV+SFGV+L EL++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 146
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLV 144
+G G FG V G + KL PG + VA+K L + + R ++L E +GQ HP++V
Sbjct: 51 IGAGEFGEVCSGRL--KL-PGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L G + ++V E+M G+L + R++ + + G A G+ +L A+
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL--ADM 164
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
++RD A NIL++S+ K+SDFGL++ D PE T ++ + APE +
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQY 222
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
TS SDV+S+G+V+ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 148
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVS 179
R E+L E + + H+V+L+G + + L++ E M RG L++ L R +
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN 128
Query: 180 LP------WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 233
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 234 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 291 ISSIKEEMEP 300
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 143
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
V+ E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 65
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 66 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++R+ A N ++ D+T K+ DFG+ +D E
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 228
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
L E L++ + L +MD Q + + L C P RPT +V L
Sbjct: 229 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
Query: 358 E 358
+
Sbjct: 288 K 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRHPHLV 144
+G G FG V+ G + D + AVK+L+ + + ++LTE I + HP+++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 145 KLIGYCCEEEHR-LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
L+G C E L+V YM G L N R + + + L AKG+ +L A
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--AS 149
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQGYAAPEYVMT 261
K ++RD A N +LD +T K++DFGLA+D E H T + A E + T
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
T+ SDV+SFGV+L EL++
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGH 125
V+ E +V+ + + LG+G FG V++G D ++ G VAVK ++ L+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + H+V+L+G + + L+V E M G L++ L R + + P
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+++A A G+A+L+ K ++R+ A N ++ D+T K+ DFG+ +D E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + APE + G T+ SD++SFGVVL E+ S
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TS 227
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
L E L++ + L +MD Q + + L C P RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 358 E 358
+
Sbjct: 287 K 287
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 226
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 227 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 284 ISSIKEEMEP 293
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 233
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 234 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 291 ISSIKEEMEP 300
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLV 144
+G G FG V +G + PG + VA+K L + R E+L+E +GQ HP+++
Sbjct: 24 IGAGEFGEVCRGRLK---APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
+L G +++ E+M G+L++ R + + G A G+ +L AE
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDS-FLRLNDGQFTVIQLVGMLRGIASGMRYL--AEM 137
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMT 261
++RD A NIL++S+ K+SDFGL++ E T +G + + APE +
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
TS SD +S+G+V+ E++S
Sbjct: 198 RKFTSASDAWSYGIVMWEVMS 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 32/306 (10%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
V+ E +V + + S LG+G FG V++G ++ + + VA+K ++ R
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 62
Query: 127 -EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLP-- 181
E+L E + + H+V+L+G + + L++ E M RG L++ L R + P
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 123 APPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + +PE + G T+ SDV+SFGVVL E+ +
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 225
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT----MSTV 353
L E L++ + L +M+ L + + L C + PK RP+ +S++
Sbjct: 226 LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
Query: 354 VKTLEP 359
+ +EP
Sbjct: 285 KEEMEP 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 226
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 227 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 284 ISSIKEEMEP 293
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 64
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 124 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 182 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 229
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 230 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 63 SNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL 122
S V+ E +V + + S LG+G FG V++G ++ + + VA+K ++
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 123 QGHR-EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRR 175
R E+L E + + H+V+L+G + + L++ E M RG L++ L
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 176 YSVSLP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK 233
V P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
D E D + + + +PE + G T+ SDV+SFGVVL E+
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI------------- 227
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT---- 349
+L E L++ + L +M+ L + + L C + PK RP+
Sbjct: 228 --ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 350 MSTVVKTLEP 359
+S++ + +EP
Sbjct: 285 ISSIKEEMEP 294
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 60
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 120 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 178 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 225
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 226 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 67
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 127 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 185 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 232
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 233 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 66
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 126 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 184 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 231
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 232 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 58
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 118 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 176 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 223
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 224 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 59
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 119 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 177 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 224
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 225 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 58
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 118 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 176 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 223
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 224 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 32/306 (10%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
V+ E +V + + S LG+G FG V++G ++ + + VA+K ++ R
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 94
Query: 127 -EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRRYSVS 179
E+L E + + H+V+L+G + + L++ E M RG L++ L V
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 180 LP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
P S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +D E
Sbjct: 155 APPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + +PE + G T+ SDV+SFGVVL E+ +
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 257
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT----MSTV 353
L E L++ + L +M+ L + + L C + PK RP+ +S++
Sbjct: 258 LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
Query: 354 VKTLEP 359
+ +EP
Sbjct: 317 KEEMEP 322
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 64
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 124 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 182 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 229
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 230 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 63
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 123 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 181 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 228
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 229 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLV 144
+G G FG V +G + PG + VA+K L + R E+L+E +GQ HP+++
Sbjct: 22 IGAGEFGEVCRGRLK---APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
+L G +++ E+M G+L++ R + + G A G+ +L AE
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDS-FLRLNDGQFTVIQLVGMLRGIASGMRYL--AEM 135
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMT 261
++RD A NIL++S+ K+SDFGL++ E T +G + + APE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
TS SD +S+G+V+ E++S
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 42/285 (14%)
Query: 86 LGEGGFGAVHKGFI--DDKLRPGLQAQPVAVKNL------DLEGLQGHREWLTEVIFLGQ 137
+G G FG V G + D+ L VAVK+ DL+ ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNTL--------VAVKSCRETLPPDLKA-----KFLQEARILKQ 168
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
HP++V+LIG C +++ +V E + G R L T +++ AA G+
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+L K I+RD A N L+ K+SDFG++++ +G + APE
Sbjct: 228 YLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
+ G +S SDV+SFG++L E S G Q+ + VE K GR+
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----------KGGRLP 335
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLK 361
P E L QC ++ P QRP+ ST+ + L+ ++
Sbjct: 336 CP-------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 58
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 118 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 176 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 223
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 224 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 68
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 128 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 186 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 233
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 234 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 53
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+RD +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 113 IAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 171 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 218
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 219 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 86 LGEGGFGAVHKGFIDD--KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LGEG FG V F+ + L P VAVK L +++ E L L+H H+
Sbjct: 21 LGEGAFGKV---FLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYS------------VSLPWSTRMKIALG 191
VK G C E + ++V+EYM G L N+ R + L S + IA
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A G+ +L A + ++RD N L+ + K+ DFG+++D D V M
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ PE +M T+ SDV+S GVVL E+ +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 32/301 (10%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLT 130
E +V + + S LG+G FG V++G ++ + + VA+K ++ R E+L
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 64
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRRYSVSLP--W 182
E + + H+V+L+G + + L++ E M RG L++ L V P
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
S +++A A G+A+L +A K ++RD A N ++ D+T K+ DFG+ +D E D
Sbjct: 125 SKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+ + + +PE + G T+ SDV+SFGVVL E+ +L E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQP 227
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT----MSTVVKTLE 358
L++ + L +M+ L + + L C + PK RP+ +S++ + +E
Sbjct: 228 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
Query: 359 P 359
P
Sbjct: 287 P 287
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 32/306 (10%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
V+ E +V + + S LG+G FG V++G ++ + + VA+K ++ R
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 59
Query: 127 -EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRRYSVS 179
E+L E + + H+V+L+G + + L++ E M RG L++ L V
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 180 LP--WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
P S +++A A G+A+L +A K ++RD A N + D+T K+ DFG+ +D E
Sbjct: 120 APPSLSKMIQMAGEIADGMAYL-NANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
D + + + +PE + G T+ SDV+SFGVVL E+ +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 222
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT----MSTV 353
L E L++ + L +M+ L + + L C + PK RP+ +S++
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
Query: 354 VKTLEP 359
+ +EP
Sbjct: 282 KEEMEP 287
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 48/288 (16%)
Query: 86 LGEGGFGAVHKGFI--DDKLRPGLQAQPVAVKNL------DLEGLQGHREWLTEVIFLGQ 137
+G G FG V G + D+ L VAVK+ DL+ ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNTL--------VAVKSCRETLPPDLKA-----KFLQEARILKQ 168
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
HP++V+LIG C +++ +V E + G R L T +++ AA G+
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST---RVMGTQGYA 254
+L K I+RD A N L+ K+SDFG++++ E D + ++ R + + +
Sbjct: 228 YLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSRE--EADGVYAASGGLRQVPVK-WT 282
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKLG 313
APE + G +S SDV+SFG++L E S G Q+ + VE K G
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----------KGG 332
Query: 314 RIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLK 361
R+ P E L QC ++ P QRP+ ST+ + L+ ++
Sbjct: 333 RLPCP-------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLR-PGLQAQPVAVKNLDLEGL-QGHREWLTEVIFLGQLRHPHL 143
+G G FG V G +L+ PG + VA+K L + R++L+E +GQ HP++
Sbjct: 37 IGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ L G + + +++ EYM GSL + R+ + + G G+ +L D
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVMGTQGYAAPEYVM 260
++RD A NIL++S+ K+SDFG+++ D PE T ++ + APE +
Sbjct: 152 --AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIA 207
Query: 261 TGHLTSMSDVYSFGVVLLELLS 282
TS SDV+S+G+V+ E++S
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMS 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLV 144
+G G FG V G + KL PG + VA+K L + R ++L+E +GQ HP+++
Sbjct: 41 IGAGEFGEVCSGHL--KL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L G + +++ E+M GSL++ R+ + + G A G+ +L D
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDS-FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN- 155
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMT 261
++RD A NIL++S+ K+SDFGL++ + T +G + + APE +
Sbjct: 156 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
TS SDV+S+G+V+ E++S
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLR-PGLQAQPVAVKNLDLEGL-QGHREWLTE 131
++ +G G FG V G +L+ PG + VA+K L + R++L+E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 65
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+GQ HP+++ L G + + +++ EYM GSL + R+ + + G
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRG 124
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVM 248
G+ +L D ++RD A NIL++S+ K+SDFG+++ D PE T ++
Sbjct: 125 IGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 181
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + TS SDV+S+G+V+ E++S
Sbjct: 182 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLR-PGLQAQPVAVKNLDLEGL-QGHREWLTE 131
++ +G G FG V G +L+ PG + VA+K L + R++L+E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 59
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+GQ HP+++ L G + + +++ EYM GSL + R+ + + G
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRG 118
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGDDTHVSTRVM 248
G+ +L D ++RD A NIL++S+ K+SDFG+++ D PE T ++
Sbjct: 119 IGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 175
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + TS SDV+S+G+V+ E++S
Sbjct: 176 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
E +V ++ LG G FG V G+ + + VAVK+L +G +L E
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAE 54
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ QL+H LV+L +E ++ EYM GSL + L + L + + +A
Sbjct: 55 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 113
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+AF+ E+ I+R+ +A+NIL+ + K++DFGLA+ + + T +
Sbjct: 114 IAEGMAFIE--ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 171
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDA 309
+ APE + G T SDV+SFG++L E+++ GR + P+ Q+L
Sbjct: 172 -WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------- 219
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ R++ P + + L C RP+ RPT + LE
Sbjct: 220 ERGYRMVRP-------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 130/288 (45%), Gaps = 25/288 (8%)
Query: 83 SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGHREWLTEVIFLGQLRHP 141
+ LGEG FG V++G + + VAVK + L ++++E + + L HP
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 85
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
H+VKLIG EEE ++ E P G L + L R + SL T + +L K +A+L
Sbjct: 86 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLES 143
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
++RD NIL+ S KL DFGL++ E +D + ++ + +PE +
Sbjct: 144 IN--CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
T+ SDV+ F V + E+LS K ++ ++ K R+ P L
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---------VIGVLEKGDRLPKPDLC 251
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKDFDDDIAI 369
T L +C + P RP + +V +L + + DIA+
Sbjct: 252 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 292
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 130/288 (45%), Gaps = 25/288 (8%)
Query: 83 SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGHREWLTEVIFLGQLRHP 141
+ LGEG FG V++G + + VAVK + L ++++E + + L HP
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 69
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
H+VKLIG EEE ++ E P G L + L R + SL T + +L K +A+L
Sbjct: 70 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLES 127
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
++RD NIL+ S KL DFGL++ E +D + ++ + +PE +
Sbjct: 128 IN--CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
T+ SDV+ F V + E+LS K ++ ++ K R+ P L
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---------VIGVLEKGDRLPKPDLC 235
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKDFDDDIAI 369
T L +C + P RP + +V +L + + DIA+
Sbjct: 236 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 276
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 130/288 (45%), Gaps = 25/288 (8%)
Query: 83 SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG-LQGHREWLTEVIFLGQLRHP 141
+ LGEG FG V++G + + VAVK + L ++++E + + L HP
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
H+VKLIG EEE ++ E P G L + L R + SL T + +L K +A+L
Sbjct: 74 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLES 131
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
++RD NIL+ S KL DFGL++ E +D + ++ + +PE +
Sbjct: 132 IN--CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
T+ SDV+ F V + E+LS K ++ ++ K R+ P L
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---------VIGVLEKGDRLPKPDLC 239
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKDFDDDIAI 369
T L +C + P RP + +V +L + + DIA+
Sbjct: 240 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 280
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 86 LGEGGFGAVHKGFIDD--KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LGEG FG V F+ + L P VAVK L +++ E L L+H H+
Sbjct: 49 LGEGAFGKV---FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS--------------LPWSTRMKIA 189
V+ G C E L+V+EYM G L N+ R + L + +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A G+ +L A ++RD N L+ K+ DFG+++D D V R M
Sbjct: 165 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA 309
+ PE ++ T+ SDV+SFGVVL E+ + K +P + S E A +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----QPWYQLSNTE-AIDCITQG 276
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
R+L R PR + A+ C P+QR ++ V L+ L
Sbjct: 277 RELER---PR-------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 86 LGEGGFGAVHKGFIDD--KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LGEG FG V F+ + L P VAVK L +++ E L L+H H+
Sbjct: 20 LGEGAFGKV---FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS--------------LPWSTRMKIA 189
V+ G C E L+V+EYM G L N+ R + L + +A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A G+ +L A ++RD N L+ K+ DFG+++D D V R M
Sbjct: 136 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA 309
+ PE ++ T+ SDV+SFGVVL E+ + K +P + S E A +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----QPWYQLSNTE-AIDCITQG 247
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
R+L R PR + A+ C P+QR ++ V L+ L
Sbjct: 248 RELER---PR-------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 86 LGEGGFGAVHKGFIDD--KLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LGEG FG V F+ + L P VAVK L +++ E L L+H H+
Sbjct: 26 LGEGAFGKV---FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS--------------LPWSTRMKIA 189
V+ G C E L+V+EYM G L N+ R + L + +A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A G+ +L A ++RD N L+ K+ DFG+++D D V R M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA 309
+ PE ++ T+ SDV+SFGVVL E+ + K +P + S E A +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----QPWYQLSNTE-AIDCITQG 253
Query: 310 RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
R+L R PR + A+ C P+QR ++ V L+ L
Sbjct: 254 RELER---PR-------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLGQLRHPHLV 144
+G G FG V G + KL PG + VA+K L + R ++L+E +GQ HP+++
Sbjct: 15 IGAGEFGEVCSGHL--KL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L G + +++ E+M GSL++ R+ + + G A G+ +L D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDS-FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN- 129
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMT 261
++R A NIL++S+ K+SDFGL++ + T +G + + APE +
Sbjct: 130 -YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 262 GHLTSMSDVYSFGVVLLELLS 282
TS SDV+S+G+V+ E++S
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 78 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 132
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 191
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 130
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 80
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 81 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 135
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 194
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ +G+G FG V KG ID++ + + VA+K +DLE + E + E+ L Q
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
P++ K G ++ ++ EY+ GS + L +T ++ L KGL +
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 139
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH +K I+RD KA+N+LL KL+DFG+A G D +GT + APE
Sbjct: 140 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEV 195
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDP 318
+ S +D++S G+ +EL G + P + L+ P P
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 242
Query: 319 RLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
LEG YS + CL+ P RPT ++K
Sbjct: 243 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 103
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 104 LIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 158
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 217
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 79 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 133
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 192
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P L KN + ++ ++L E + + Q HPH+VK
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 72
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 73 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 127
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 186
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G G V G+ + + VAVK+L +G +L E + QL+H LV+
Sbjct: 21 LGAGQAGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L +E ++ EYM GSL + L + L + + +A A+G+AF+ E+
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD +A+NIL+ + K++DFGLA+ + + T + + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYGTFT 188
Query: 266 SMSDVYSFGVVLLELLS-GRKSV-DKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ 323
SDV+SFG++L E+++ GR + P+ Q+L + R++ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP----- 232
Query: 324 YSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ + L C RP+ RPT + LE
Sbjct: 233 --DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G FG V G + VAVK + + + +L E + QLRH +LV+
Sbjct: 20 IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 69
Query: 146 LIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L+G EE+ L +V EYM +GSL + L R L +K +L + + +L
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 128
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT-HVSTRVMGTQGYAAPEYVMTGH 263
++RD A N+L+ D AK+SDFGL K+ DT + + + APE +
Sbjct: 129 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAA 181
Query: 264 LTSMSDVYSFGVVLLELLS 282
++ SDV+SFG++L E+ S
Sbjct: 182 FSTKSDVWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G FG V G + VAVK + + + +L E + QLRH +LV+
Sbjct: 29 IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 78
Query: 146 LIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L+G EE+ L +V EYM +GSL + L R L +K +L + + +L
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 137
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT-HVSTRVMGTQGYAAPEYVMTGH 263
++RD A N+L+ D AK+SDFGL K+ DT + + + APE +
Sbjct: 138 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 190
Query: 264 LTSMSDVYSFGVVLLELLS 282
++ SDV+SFG++L E+ S
Sbjct: 191 FSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G FG V G + VAVK + + + +L E + QLRH +LV+
Sbjct: 14 IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 63
Query: 146 LIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L+G EE+ L +V EYM +GSL + L R L +K +L + + +L
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 122
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT-HVSTRVMGTQGYAAPEYVMTGH 263
++RD A N+L+ D AK+SDFGL K+ DT + + + APE +
Sbjct: 123 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 175
Query: 264 LTSMSDVYSFGVVLLELLS 282
++ SDV+SFG++L E+ S
Sbjct: 176 FSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G FG V G + VAVK + + + +L E + QLRH +LV+
Sbjct: 201 IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 250
Query: 146 LIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L+G EE+ L +V EYM +GSL + L R L +K +L + + +L
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 309
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT-HVSTRVMGTQGYAAPEYVMTGH 263
++RD A N+L+ D AK+SDFGL K+ DT + + + APE +
Sbjct: 310 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 362
Query: 264 LTSMSDVYSFGVVLLELLS 282
++ SDV+SFG++L E+ S
Sbjct: 363 FSTKSDVWSFGILLWEIYS 381
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ +G+G FG V KG ID++ + + VA+K +DLE + E + E+ L Q
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
P++ K G ++ ++ EY+ GS + L +T ++ L KGL +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 134
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH +K I+RD KA+N+LL KL+DFG+A G D +GT + APE
Sbjct: 135 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 190
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDP 318
+ S +D++S G+ +EL G + P + L+ P P
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 237
Query: 319 RLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
LEG YS + CL+ P RPT ++K
Sbjct: 238 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ +G+G FG V KG ID++ + + VA+K +DLE + E + E+ L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
P++ K G ++ ++ EY+ GS + L +T ++ L KGL +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 119
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH +K I+RD KA+N+LL KL+DFG+A G D +GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 175
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDP 318
+ S +D++S G+ +EL G + P + L+ P P
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 222
Query: 319 RLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
LEG YS + CL+ P RPT ++K
Sbjct: 223 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P + KN + ++ ++L E + + Q HPH+VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R+YS+ L ++ + A + LA+L K
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES--K 130
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P + KN + ++ ++L E + + Q HPH+VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R++S+ L ++ + A + LA+L K
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES--K 130
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ S+ KL DFGL++ + S + + + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESINFRRF 189
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ +G+G FG V KG ID++ + + VA+K +DLE + E + E+ L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
P++ K G ++ ++ EY+ GS + L +T ++ L KGL +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 119
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH +K I+RD KA+N+LL KL+DFG+A G D +GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEV 175
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDP 318
+ S +D++S G+ +EL G + P + L+ P P
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 222
Query: 319 RLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
LEG YS + CL+ P RPT ++K
Sbjct: 223 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQLRHPHL 143
LGEG FG V K K R G VAVK L R+ L+E L Q+ HPH+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----------------------SLP 181
+KL G C ++ LL+ EY GSL L V +L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 182 WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT 241
+ A ++G+ +L AE +++RD A NIL+ K+SDFGL++D E D
Sbjct: 149 MGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 242 HVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVE 300
++ + A E + T+ SDV+SFGV+L E+++ G P+R +L+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 301 WARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
K G M + + + + L QC P +RP + + K LE +
Sbjct: 266 ----------KTGHRM------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 39/325 (12%)
Query: 48 SSTTLSE-DLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG 106
+ST +++ + + S AG + L E V ++ + LG G FG V++G + G
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS-----G 54
Query: 107 LQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYE 161
+ P VAVK L ++ Q ++L E + + +L H ++V+ IG + R ++ E
Sbjct: 55 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLE 114
Query: 162 YMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNI 216
M G L++ L R S P S M +A A G +L E I+RD A N
Sbjct: 115 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 172
Query: 217 LLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSF 273
LL AK+ DFG+A+D M + PE M G TS +D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 274 GVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAA 333
GV+L E+ S S+ +E +L GR MDP +
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNCPGPVY 276
Query: 334 ALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQLRHPHL 143
LGEG FG V K K R G VAVK L R+ L+E L Q+ HPH+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----------------------SLP 181
+KL G C ++ LL+ EY GSL L V +L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 182 WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT 241
+ A ++G+ +L AE +++RD A NIL+ K+SDFGL++D E D
Sbjct: 149 MGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 242 HVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVE 300
++ + A E + T+ SDV+SFGV+L E+++ G P+R +L+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 301 WARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
K G M + + + + L QC P +RP + + K LE +
Sbjct: 266 ----------KTGHRM------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQLRHPHL 143
LGEG FG V K K R G VAVK L R+ L+E L Q+ HPH+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----------------------SLP 181
+KL G C ++ LL+ EY GSL L V +L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 182 WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT 241
+ A ++G+ +L AE +++RD A NIL+ K+SDFGL++D E D
Sbjct: 149 MGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 242 HVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVE 300
++ + A E + T+ SDV+SFGV+L E+++ G P+R +L+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 301 WARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
K G M + + + + L QC P +RP + + K LE +
Sbjct: 266 ----------KTGHRM------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 31/277 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ + +G+G FG V+KG ID+ + + VA+K +DLE + E + E+ L Q
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTK-----EVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
P++ + G + ++ EY+ GS + L L + I KGL +
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDY 131
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH K I+RD KA+N+LL KL+DFG+A G D +GT + APE
Sbjct: 132 LHSERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 187
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDP 318
+ +D++S G+ +EL G P R L+ P P
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------P 234
Query: 319 RLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
LEGQ+S+ A CL+ P+ RPT ++K
Sbjct: 235 TLEGQHSKPFKEFVEA----CLNKDPRFRPTAKELLK 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 83 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH--A 138
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM--- 260
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR-IMDPR 319
+ + SDVY+FG+VL EL++G+ + S ++E +GR + P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE----------MVGRGSLSPD 246
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L S R +A +CL + +RP+ ++ +E L
Sbjct: 247 LSKVRSNCPKRMKRLMA-ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A+L++ ++ LG G FG V+KG + G + PVA+K L + G + + E
Sbjct: 7 AQLRILKETELKRVKVLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
++ E + + + HPHLV+L+G C +L V + MP G L + + ++ +
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCL-LEYVHEHKDNIGSQLLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+ +L E+ +++RD A N+L+ S K++DFGLA+ EGD+ +
Sbjct: 122 WCVQIAKGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNAD- 177
Query: 248 MGTQ---GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQRE 295
G + + A E + T SDV+S+GV + EL++ G K D P RE
Sbjct: 178 -GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTRE 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 49 STTLSEDLSISLAGSNLHVFTLAELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGL 107
T L E L+ S N A+L++ ++ LG G FG V+KG + G
Sbjct: 13 ETELVEPLTPSGTAPNQ-----AQLRILKETELKRVKVLGSGAFGTVYKGIW---VPEGE 64
Query: 108 QAQ-PVAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPR 165
+ PVA+K L + G + + E++ E + + + HPHLV+L+G C +L V + MP
Sbjct: 65 TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPH 123
Query: 166 GSLENQLFRRY-----SVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS 220
G L + + L W ++ AKG+ +L E+ +++RD A N+L+ S
Sbjct: 124 GCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE--ERRLVHRDLAARNVLVKS 175
Query: 221 DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTGHLTSMSDVYSFGVVL 277
K++DFGLA+ EGD+ + G + + A E + T SDV+S+GV +
Sbjct: 176 PNHVKITDFGLARLL-EGDEKEYNAD--GGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232
Query: 278 LELLS-GRKSVDKSRPQRE 295
EL++ G K D P RE
Sbjct: 233 WELMTFGGKPYD-GIPTRE 250
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 141/330 (42%), Gaps = 40/330 (12%)
Query: 44 LSNPSSTTLSEDLS--ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDD 101
LS ++T+ D + S AG + L E V ++ + LG G FG V++G +
Sbjct: 23 LSKLRTSTIMTDYNPNYSFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS- 79
Query: 102 KLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR 156
G+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R
Sbjct: 80 ----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 135
Query: 157 LLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDF 211
++ E M G L++ L R S P S M +A A G +L E I+RD
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDI 193
Query: 212 KASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS 268
A N LL AK+ DFG+A+D M + PE M G TS +
Sbjct: 194 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 253
Query: 269 DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETG 328
D +SFGV+L E+ S S+ +E +L GR MDP +
Sbjct: 254 DTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNC 297
Query: 329 ARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 298 PGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 39/325 (12%)
Query: 48 SSTTLSE-DLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG 106
+ST +++ + + S AG + L E V ++ + LG G FG V++G + G
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS-----G 54
Query: 107 LQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYE 161
+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R ++ E
Sbjct: 55 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 114
Query: 162 YMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNI 216
M G L++ L R S P S M +A A G +L E I+RD A N
Sbjct: 115 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 172
Query: 217 LLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSF 273
LL AK+ DFG+A+D M + PE M G TS +D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 274 GVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAA 333
GV+L E+ S S+ +E +L GR MDP +
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNCPGPVY 276
Query: 334 ALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + +V ++ SL + L + IA A+G+ +LH
Sbjct: 83 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH--A 138
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM--- 260
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR-IMDPR 319
+ + SDVY+FG+VL EL++G+ + S ++E +GR + P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE----------MVGRGSLSPD 246
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L S R +A +CL + +RP+ ++ +E L
Sbjct: 247 LSKVRSNCPKRMKRLMA-ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 30/251 (11%)
Query: 123 QGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW 182
+ R +L EV + L HP+++K IG +++ + EY+ G+L + + PW
Sbjct: 49 ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPW 107
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA------KDGP 236
S R+ A A G+A+LH +I+RD + N L+ + ++DFGLA K P
Sbjct: 108 SQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 237 EG------DDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
EG D V+G + APE + DV+SFG+VL E++ GR + D
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPD 224
Query: 291 RPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
R LN L R P + R C P++RP+
Sbjct: 225 YLPRTMDF------GLNVRGFLDRYCPPNCPPSFFPITVR--------CCDLDPEKRPSF 270
Query: 351 STVVKTLEPLK 361
+ LE L+
Sbjct: 271 VKLEHWLETLR 281
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 134/304 (44%), Gaps = 37/304 (12%)
Query: 69 TLAELK-VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGL 122
++++LK V ++ + LG G FG V++G + G+ P VAVK L ++
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSE 89
Query: 123 QGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLP 181
Q ++L E + + +L H ++V+ IG + R ++ E M G L++ L R S P
Sbjct: 90 QDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 149
Query: 182 WSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKD 234
S M +A A G +L E I+RD A N LL AK+ DFG+A+D
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 235 GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQR 294
M + PE M G TS +D +SFGV+L E+ S S+ +
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
Query: 295 EQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
E +L GR MDP + + QC H+P+ RP + ++
Sbjct: 268 E---------VLEFVTSGGR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
Query: 355 KTLE 358
+ +E
Sbjct: 312 ERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 141/330 (42%), Gaps = 40/330 (12%)
Query: 44 LSNPSSTTLSEDLS--ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDD 101
LS ++T+ D + S AG + L E V ++ + LG G FG V++G +
Sbjct: 3 LSKLRTSTIMTDYNPNYSFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS- 59
Query: 102 KLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR 156
G+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R
Sbjct: 60 ----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 115
Query: 157 LLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDF 211
++ E M G L++ L R S P S M +A A G +L E I+RD
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDI 173
Query: 212 KASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS 268
A N LL AK+ DFG+A+D M + PE M G TS +
Sbjct: 174 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 233
Query: 269 DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETG 328
D +SFGV+L E+ S S+ +E +L GR MDP +
Sbjct: 234 DTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNC 277
Query: 329 ARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 278 PGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P + KN + ++ ++L E + + Q HPH+VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 455
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R++S+ L ++ + A + LA+L K
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES--K 510
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG-----YAAPEYV 259
++RD A N+L+ S+ KL DFGL++ + ST ++G + APE +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED------STYYKASKGKLPIKWMAPESI 564
Query: 260 MTGHLTSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 39/325 (12%)
Query: 48 SSTTLSE-DLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG 106
+ST +++ + + S AG + L E V ++ + LG G FG V++G + G
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS-----G 54
Query: 107 LQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYE 161
+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R ++ E
Sbjct: 55 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 114
Query: 162 YMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNI 216
M G L++ L R S P S M +A A G +L E I+RD A N
Sbjct: 115 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 172
Query: 217 LLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSF 273
LL AK+ DFG+A+D M + PE M G TS +D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 274 GVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAA 333
GV+L E+ S S+ +E +L GR MDP +
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNCPGPVY 276
Query: 334 ALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQL 138
F+ +G+G FG V KG ID++ + Q VA+K +DLE + E + E+ L Q
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQ-----QVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL----FRRYSVSLPWSTRMKIALGAAK 194
++ K G + ++ EY+ GS + L F + ++ T +K L K
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA----TMLKEIL---K 131
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
GL +LH +K I+RD KA+N+LL KL+DFG+A G D +GT +
Sbjct: 132 GLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWM 187
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR 314
APE + S +D++S G+ +EL G P R L+ P
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---------- 237
Query: 315 IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
P L G ++++ A CL+ P RPT ++K
Sbjct: 238 ---PTLVGDFTKSFKEFIDA----CLNKDPSFRPTAKELLK 271
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
LG G FG+V +G R + VA+K L +G + E + E + QL +P++
Sbjct: 18 LGCGNFGSVRQGV----YRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
V+LIG C+ E +LV E G L L + +P S ++ + G+ +L E
Sbjct: 73 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE--E 128
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMT 261
K ++RD A N+LL + + AK+SDFGL+K DD++ + R G + APE +
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 262 GHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPM 305
+S SDV+S+GV + E LS G+K K + + +E + M
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 20 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 71 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH--A 126
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM--- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR-IMDPR 319
+ + SDVY+FG+VL EL++G+ + S ++E +GR + P
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE----------MVGRGSLSPD 234
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
L S R +A +CL + +RP+ ++ +E L
Sbjct: 235 LSKVRSNCPKRMKRLMA-ECLKKKRDERPSFPRILAEIEEL 274
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 14/217 (6%)
Query: 73 LKVTTQSFSSSNF-----LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNL-DLEGLQGH 125
+KV + F + LG G FG VHKG +I + + PV +K + D G Q
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKI---PVCIKVIEDKSGRQSF 59
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR 185
+ ++ +G L H H+V+L+G C +L V +Y+P GSL + + R++ +L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGPQLL 117
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ +L E +++R+ A N+LL S +++DFG+A P D + +
Sbjct: 118 LNWGVQIAKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ A E + G T SDV+S+GV + EL++
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE---GLQGHREWLT 130
K + Q F LG G FG VH +R + A+K L E L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHL------IRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 55
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
E + L + HP ++++ G + + ++ +Y+ G L + L R S P A
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAA 113
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
L +LH K +IYRD K NILLD + K++DFG AK P+ V+ + GT
Sbjct: 114 EVCLALEYLH--SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGT 166
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y APE V T D +SFG+++ E+L+G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRH 140
LG G FG V++G + G+ P VAVK L ++ Q ++L E + + + H
Sbjct: 53 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNH 107
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKG 195
++V+ IG + R ++ E M G L++ L R S P S M +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+L E I+RD A N LL AK+ DFG+A+D M
Sbjct: 168 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKL 312
+ PE M G TS +D +SFGV+L E+ S S+ +E +L
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSG 276
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
GR MDP + + QC H+P+ RP + +++ +E
Sbjct: 277 GR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 74 KVTTQSFSSSNF-----LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNL-DLEGLQGHR 126
KV + F + LG G FG VHKG +I + + PV +K + D G Q +
Sbjct: 22 KVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKI---PVCIKVIEDKSGRQSFQ 78
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
++ +G L H H+V+L+G C +L V +Y+P GSL + + R++ +L +
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGPQLLL 136
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
+ AKG+ +L E +++R+ A N+LL S +++DFG+A P D + +
Sbjct: 137 NWGVQIAKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ A E + G T SDV+S+GV + EL++
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 69 TLAELK-VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGL 122
++++LK V ++ + LG G FG V++G + G+ P VAVK L ++
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSE 74
Query: 123 QGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLP 181
Q ++L E + + + H ++V+ IG + R ++ E M G L++ L R S P
Sbjct: 75 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 134
Query: 182 WSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKD 234
S M +A A G +L E I+RD A N LL AK+ DFG+A+D
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 235 GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQR 294
M + PE M G TS +D +SFGV+L E+ S S+ +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
Query: 295 EQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
E +L GR MDP + + QC H+P+ RP + ++
Sbjct: 253 E---------VLEFVTSGGR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
Query: 355 KTLE 358
+ +E
Sbjct: 297 ERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRH 140
LG G FG V++G + G+ P VAVK L ++ Q ++L E + + + H
Sbjct: 53 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKG 195
++V+ IG + R ++ E M G L++ L R S P S M +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+L E I+RD A N LL AK+ DFG+A+D M
Sbjct: 168 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKL 312
+ PE M G TS +D +SFGV+L E+ S S+ +E +L
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSG 276
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
GR MDP + + QC H+P+ RP + +++ +E
Sbjct: 277 GR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 132
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD +V + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 237
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 238 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 69 TLAELK-VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGL 122
++++LK V ++ + LG G FG V++G + G+ P VAVK L ++
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSE 74
Query: 123 QGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLP 181
Q ++L E + + + H ++V+ IG + R ++ E M G L++ L R S P
Sbjct: 75 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP 134
Query: 182 WSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKD 234
S M +A A G +L E I+RD A N LL AK+ DFG+A+D
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 235 GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQR 294
M + PE M G TS +D +SFGV+L E+ S S+ +
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
Query: 295 EQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
E +L GR MDP + + QC H+P+ RP + ++
Sbjct: 253 E---------VLEFVTSGGR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
Query: 355 KTLE 358
+ +E
Sbjct: 297 ERIE 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 44 LSNPSSTTLSEDLS--ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDD 101
LS ++T+ D + AG + L E V ++ + LG G FG V++G +
Sbjct: 13 LSKLRTSTIMTDYNPNYCFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS- 69
Query: 102 KLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR 156
G+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R
Sbjct: 70 ----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 125
Query: 157 LLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDF 211
++ E M G L++ L R S P S M +A A G +L E I+RD
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDI 183
Query: 212 KASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS 268
A N LL AK+ DFG+A+D M + PE M G TS +
Sbjct: 184 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 243
Query: 269 DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETG 328
D +SFGV+L E+ S S+ +E +L GR MDP +
Sbjct: 244 DTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNC 287
Query: 329 ARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 288 PGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 69 TLAELK-VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGL 122
++++LK V ++ + LG G FG V++G + G+ P VAVK L ++
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSE 66
Query: 123 QGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLP 181
Q ++L E + + + H ++V+ IG + R ++ E M G L++ L R S P
Sbjct: 67 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 126
Query: 182 WSTRM----KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKD 234
S M +A A G +L E I+RD A N LL AK+ DFG+A+D
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 235 GPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQR 294
M + PE M G TS +D +SFGV+L E+ S S+ +
Sbjct: 185 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 244
Query: 295 EQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
E +L GR MDP + + QC H+P+ RP + ++
Sbjct: 245 E---------VLEFVTSGGR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 288
Query: 355 KTLE 358
+ +E
Sbjct: 289 ERIE 292
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQLRH 140
S +G+G FG V+ G D+ + +Q A+K+L + +Q +L E + + L H
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQC---AIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 141 PHLVKLIGYCCEEE---HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
P+++ LIG E H LL YM G L Q R + + L A+G+
Sbjct: 82 PNVLALIGIMLPPEGLPHVLL--PYMCHGDL-LQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGD----DTHVSTRVMGTQGY 253
+L AE+ ++RD A N +LD +T K++DFGLA+D + + H R+ +
Sbjct: 139 YL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKW 194
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
A E + T T+ SDV+SFGV+L ELL+
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 44 LSNPSSTTLSEDLS--ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDD 101
LS ++T+ D + AG + L E V ++ + LG G FG V++G +
Sbjct: 14 LSKLRTSTIMTDYNPNYCFAGKTSSISDLKE--VPRKNITLIRGLGHGAFGEVYEGQVS- 70
Query: 102 KLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHR 156
G+ P VAVK L ++ Q ++L E + + + H ++V+ IG + R
Sbjct: 71 ----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 126
Query: 157 LLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKGLAFLHDAEKPVIYRDF 211
++ E M G L++ L R S P S M +A A G +L E I+RD
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDI 184
Query: 212 KASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS 268
A N LL AK+ DFG+A+D M + PE M G TS +
Sbjct: 185 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 244
Query: 269 DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETG 328
D +SFGV+L E+ S S+ +E +L GR MDP +
Sbjct: 245 DTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGR-MDP------PKNC 288
Query: 329 ARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
+ QC H+P+ RP + +++ +E
Sbjct: 289 PGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQP----VAVKNL-DLEGLQGHREWLTEVIFLGQLRH 140
LG G FG V++G + G+ P VAVK L ++ Q ++L E + + + H
Sbjct: 79 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRM----KIALGAAKG 195
++V+ IG + R ++ E M G L++ L R S P S M +A A G
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+L E I+RD A N LL AK+ DFG+A+D M
Sbjct: 194 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKL 312
+ PE M G TS +D +SFGV+L E+ S S+ +E +L
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSG 302
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
GR MDP + + QC H+P+ RP + +++ +E
Sbjct: 303 GR-MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 327 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 383
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 436
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 486
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 487 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD +V + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 233
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 234 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 244 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 353
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 403
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 404 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P + KN + ++ ++L E + + Q HPH+VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R++S+ L ++ + A + LA+L K
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES--K 130
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
++RD A N+L+ + KL DFGL++ + S + + + APE +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 265 TSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 244 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 353
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 403
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 404 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 132
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD +V + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 237
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 238 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G+ ++ + VAVK L G + +L E + L+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE ++ EYM +GSL + L + + + A+G+A++ K
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKN 130
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD +A+N+L+ K++DFGLA+ + + T + + APE + G T
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFT 189
Query: 266 SMSDVYSFGVVLLELLS 282
SDV+SFG++L E+++
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 67
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 125
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 126 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 184 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG FG VH+G P + KN + ++ ++L E + + Q HPH+VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 455
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQL-FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
LIG E ++ E G L + L R++S+ L ++ + A + LA+L K
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES--K 510
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG-----YAAPEYV 259
++RD A N+L+ + KL DFGL++ + ST ++G + APE +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED------STYYKASKGKLPIKWMAPESI 564
Query: 260 MTGHLTSMSDVYSFGVVLLELL 281
TS SDV+ FGV + E+L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD +V + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 233
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 234 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 122 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 53 SEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-P 111
+E+L +G + L LK T F LG G FG V+KG + G + + P
Sbjct: 17 TENLYFQGSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIP 71
Query: 112 VAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLEN 170
VA+K L + + ++E L E + + +PH+ +L+G C +L+ + MP G L +
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 171 QLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG 230
+ R + ++ + + AKG+ +L D + +++RD A N+L+ + K++DFG
Sbjct: 131 YV-REHKDNIGSQYLLNWCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFG 187
Query: 231 LAK-DGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
LAK G E + H + + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 188 LAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 138
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD +V + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 243
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 244 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 64
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 122
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 123 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 181 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
++RD +A+NIL+ + K++DFGLA+ + + T + + APE + G T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFT 193
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP------- 237
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 68 LYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 124
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
++RD +A+NIL+ + K++DFGLA+ + + T + + APE + G T
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFT 183
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP------- 227
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 65
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 124 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 17 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 73
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 131
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 132 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 190 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 66
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 125 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 57
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 58 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 115
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 116 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 174 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 122
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 231
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 232 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 65
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 124 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 36 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 87 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 142
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 251
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 252 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 290
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 70
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 129 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 13 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 69
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 127
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 128 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 186 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 64
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLN 122
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 123 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 181 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 244 LYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 353
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 403
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 404 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 66
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 125 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 122 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 71 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 127
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTAR----QGAKFPIKWTAPEAA 180
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 230
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 231 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 95 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 150
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 259
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 260 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 122 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 66
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 125 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 66
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 125 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIGSQYLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 122 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
LG G FG+V +G R + VA+K L +G + E + E + QL +P++
Sbjct: 344 LGCGNFGSVRQGVY----RMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
V+LIG C+ E +LV E G L L + +P S ++ + G+ +L E
Sbjct: 399 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE--E 454
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMT 261
K ++R+ A N+LL + + AK+SDFGL+K DD++ + R G + APE +
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 262 GHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPM 305
+S SDV+S+GV + E LS G+K K + + +E + M
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 558
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 18 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 241
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 242 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD V + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 233
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 234 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 25 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 137
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 248
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 249 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 23 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 135
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 246
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 247 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 296
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LTEVIFLG 136
FS +G G FGAV+ R ++ VA+K + G Q + +W + EV FL
Sbjct: 17 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGL 196
+LRHP+ ++ G E LV EY GS + L + L + GA +GL
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
A+LH +I+RD KA NILL KL DFG A + +GT + AP
Sbjct: 129 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAP 180
Query: 257 EYVMT---GHLTSMSDVYSFGVVLLEL 280
E ++ G DV+S G+ +EL
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LTEVIFLG 136
FS +G G FGAV+ R ++ VA+K + G Q + +W + EV FL
Sbjct: 56 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGL 196
+LRHP+ ++ G E LV EY GS + L + L + GA +GL
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
A+LH +I+RD KA NILL KL DFG A + +GT + AP
Sbjct: 168 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAP 219
Query: 257 EYVMT---GHLTSMSDVYSFGVVLLEL 280
E ++ G DV+S G+ +EL
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 36 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 259
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 260 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 18 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 241
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 242 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 67 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 123
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTAR----QGAKFPIKWTAPEAA 176
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 226
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 227 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 24 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 136
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 247
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 248 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 21 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 244
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 245 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 69 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 125
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 178
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 228
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 229 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 17 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 129
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 240
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 241 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 49 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 161
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 272
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 273 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 322
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWLTEVIFLGQLRHPH 142
LG+G FG V +G D P + VAVK L + L + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
L++L G ++ V E P GSL ++L R++ T + A+ A+G+ +L
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE-- 138
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ-GYAAPEYVMT 261
K I+RD A N+LL + K+ DFGL + P+ DD V + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLE 321
+ SD + FGV L E+ + + W LN ++ L +I
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE-------------PWIG--LNGSQILHKIDKEGER 243
Query: 322 GQYSETGARKAAALAYQCLSHRPKQRPT 349
E + + QC +H+P+ RPT
Sbjct: 244 LPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 36 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 259
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 260 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 117/225 (52%), Gaps = 13/225 (5%)
Query: 69 TLAELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGH 125
+A L++ ++ F LG G FG V+KG + G + + PVA+K L + + +
Sbjct: 2 AMALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKAN 58
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR 185
+E L E + + +PH+ +L+G C +L+ + MP G L + + R + ++
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYL 116
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVS 244
+ + A+G+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 117 LNWCVQIAEGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 175 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 22 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 134
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 245
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 246 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 295
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 16 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 128
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 239
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 240 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 289
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 18 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 241
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 242 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
+ L NL+ ++ + ++ + + LG G +G V+ G + VAVK L
Sbjct: 12 VDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKK------YSLTVAVKTL 65
Query: 118 DLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYS 177
+ ++ E+L E + +++HP+LV+L+G C E +V EYMP G+L + L
Sbjct: 66 KEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR 124
Query: 178 VSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+ + +A + + +L +K I+RD A N L+ ++ K++DFGL++
Sbjct: 125 EEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT- 181
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLEL 280
GD + APE + + SDV++FGV+L E+
Sbjct: 182 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 19 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L +++ + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+R+ NIL++++ K+ DFGL K P+ D + + G + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 242
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 243 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 155 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 262
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 263 KLLKEGHRMD------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + ++RH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 196 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 303
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 304 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 72 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 127
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 236
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 237 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 83
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 144 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 251
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 252 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 72 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 127
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 236
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 237 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 33/292 (11%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI 133
++ +S LG G FG V + + VAVK + G +L E
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEAN 62
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
+ L+H LVKL +E ++ E+M +GSL + L P + + A
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 121
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+G+AF+ ++ I+RD +A+NIL+ + K++DFGLA+ + + T + +
Sbjct: 122 EGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-W 178
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKL 312
APE + G T SDV+SFG++L+E+++ GR + P + A +
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----------SNPEVIRALER 227
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKDFD 364
G M PR E + + +C +RP++RPT + L+ DF+
Sbjct: 228 GYRM-PR-----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD---DFE 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 122
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 231
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 232 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + ++ A G+A++
Sbjct: 75 LYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTAR----QGAKFPIKWTAPEAA 184
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 234
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 235 ------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 21 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ EY+P GSL + L + ++ + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL- 133
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 244
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 245 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 18 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 69 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 124
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 233
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 234 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 147 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 254
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 255 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 43 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 94 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 149
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 258
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 259 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 297
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 148 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 255
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 256 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + + +V ++ SL + L + IA A+G+ +LH
Sbjct: 95 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 150
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 259
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 260 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 155 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 262
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 263 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +G L + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 84 NFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL-RHPH 142
+ +GEG FG V K I + GL+ + + HR++ E+ L +L HP+
Sbjct: 21 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV---------------SLPWSTRMK 187
++ L+G C + L EY P G+L + R+ V +L +
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L ++K I+RD A NIL+ +Y AK++DFGL++ G + +V +
Sbjct: 137 FAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 189
Query: 248 MGT--QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
MG + A E + T+ SDV+S+GV+L E++S
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 155 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 262
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 263 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI 133
++ +S LG G FG V + + VAVK + G +L E
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEAN 235
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
+ L+H LVKL +E ++ E+M +GSL + L P + + A
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+G+AF+ ++ I+RD +A+NIL+ + K++DFGLA+ + + T + +
Sbjct: 295 EGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-W 351
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKL 312
APE + G T SDV+SFG++L+E+++ GR P S E R + R
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI------PYPGMSNPEVIRALERGYRM- 404
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
PR E + + +C +RP++RPT + L+
Sbjct: 405 -----PR-----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + +A A G+A++
Sbjct: 245 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 301
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGL G +D + R QG + APE
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGL---GRLIEDNEYTAR----QGAKFPIKWTAPEAA 354
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 404
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 405 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 33/301 (10%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL--DLEGLQGHRE 127
L ++ + Q F+ LG+G FG+V + + + ++ VAVK L D+ E
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIEE 71
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHR------LLVYEYMPRGSLENQLFR----RYS 177
+L E + + HPH+ KL+G + +++ +M G L L
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 178 VSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+LP T ++ + A G+ +L + + I+RD A N +L D T ++DFGL++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQS 297
GD + A E + T SDV++FGV + E++ +R Q +
Sbjct: 190 GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM--------TRGQTPYA 241
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
+E A + N R+ P + L YQC S PKQRP+ + + L
Sbjct: 242 GIENAE-IYNYLIGGNRLKQP-------PECMEEVYDLMYQCWSADPKQRPSFTCLRMEL 293
Query: 358 E 358
E
Sbjct: 294 E 294
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 84 NFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL-RHPH 142
+ +GEG FG V K I + GL+ + + HR++ E+ L +L HP+
Sbjct: 31 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV---------------SLPWSTRMK 187
++ L+G C + L EY P G+L + R+ V +L +
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L ++K I+RD A NIL+ +Y AK++DFGL++ G + +V +
Sbjct: 147 FAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 199
Query: 248 MGT--QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
MG + A E + T+ SDV+S+GV+L E++S
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 67
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 125
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 126 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 184 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +GSL + L L + ++ A G+A++
Sbjct: 75 LYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
++RD +A+NIL+ + K++DFGLA+ + + T + + APE + G T
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-WTAPEAALYGRFT 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP------- 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 65
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 124 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI 133
++ +S LG G FG V G + + VA+K L G +L E
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTK-------VAIKTLK-PGTMSPESFLEEAQ 56
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
+ +L+H LV+L EE +V EYM +GSL + L +L + +A A
Sbjct: 57 IMKKLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVA 115
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
G+A++ I+RD +++NIL+ + K++DFGLA+ + + T + +
Sbjct: 116 AGMAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-W 172
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
APE + G T SDV+SFG++L EL++
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F L G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 70
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 129 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L EE +V EYM +G L + L L + +A A G+A++
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG------YAAPEYV 259
++RD +A+NIL+ + K++DFGLA+ +D + R QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTAR----QGAKFPIKWTAPEAA 187
Query: 260 MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPR 319
+ G T SDV+SFG++L EL + + RE +L+ + R+ P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRMPCP- 237
Query: 320 LEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L QC P++RPT + LE
Sbjct: 238 ------PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 65
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L++ + MP G L + + R + ++ +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 124 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+ L + + ++E
Sbjct: 41 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIMELREATSPKANKE 97
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 98 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 155
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 156 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 214 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+G G FG V+KG VAVK L++ Q + + EV L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+ +GY + +V ++ SL + L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH--A 122
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT-- 261
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 -GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRL 320
+ SDVY+FG+VL EL++G+ R+Q + R L+ P L
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS----------PDL 231
Query: 321 EGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
S + L +CL + +RP ++ ++E L
Sbjct: 232 SKVRSNC-PKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 65
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 124 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F L G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 70
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFGLAK G E + H
Sbjct: 129 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHREWLTEVIFLGQ 137
F L G FG V+KG + G + + PVA+K L + + ++E L E +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
+ +PH+ +L+G C +L+ + MP G L + + R + ++ + + AKG+
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMN 131
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTRVMGTQGYAAP 256
+L D + +++RD A N+L+ + K++DFGLAK G E + H + + + A
Sbjct: 132 YLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMAL 188
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
E ++ T SDV+S+GV + EL++ G K D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI 133
++ +S LG G FG V + + VAVK + G +L E
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEAN 229
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
+ L+H LVKL +E ++ E+M +GSL + L P + + A
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+G+AF+ ++ I+RD +A+NIL+ + K++DFGLA+ G + +
Sbjct: 289 EGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKW 335
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKL 312
APE + G T SDV+SFG++L+E+++ GR + P + A +
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----------SNPEVIRALER 384
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
G M PR E + + +C +RP++RPT + L+
Sbjct: 385 GYRM-PR-----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+F LK +Q LG+G FG+V D L A VAVK L G R
Sbjct: 6 IFEERHLKYISQ-------LGKGNFGSVELCRYD-PLGDNTGAL-VAVKQLQHSGPDQQR 56
Query: 127 EWLTEVIFLGQLRHPHLVKLIG--YCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
++ E+ L L +VK G Y + LV EY+P G L + +R+ L S
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASR 115
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
+ + KG+ +L + ++RD A NIL++S+ K++DFGLAK P D +V
Sbjct: 116 LLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV- 172
Query: 245 TRVMGTQG--YAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
R G + APE + + SDV+SFGVVL EL +
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G+ ++ + VAVK L G + +L E + L+H LV+
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L +EE ++ E+M +GSL + L + + + A+G+A++ K
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKN 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD +A+N+L+ K++DFGLA+ + + T + + APE + G T
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFT 188
Query: 266 SMSDVYSFGVVLLELLS 282
S+V+SFG++L E+++
Sbjct: 189 IKSNVWSFGILLYEIVT 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 63
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 122 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ---AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
LG+G FG+V D LQ + VAVK L + R++ E+ L L+H +
Sbjct: 21 LGKGNFGSVEMCRYDP-----LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 143 LVKLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+VK G C R L+ E++P GSL L +++ + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEY 258
K I+RD NIL++++ K+ DFGL K P+ D + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDA--------- 309
+ + SDV+SFGVVL EL + ++KS+ E+ R + ND
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT---YIEKSK----SPPAEFMRMIGNDKQGQMIVFHL 244
Query: 310 ----RKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ GR+ PR +G E + +C ++ QRP+ + ++ ++D
Sbjct: 245 IELLKNNGRL--PRPDGCPDEI-----YMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
Query: 71 AELKVTTQS-FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNL-DLEGLQGHRE 127
A L++ ++ F LG G FG V+KG + G + + PVA+K L + + ++E
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKE 70
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E + + +PH+ +L+G C +L+ + MP G L + + R + ++ +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGDDTHVSTR 246
+ AKG+ +L D + +++RD A N+L+ + K++DFG AK G E + H
Sbjct: 129 WCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS-GRKSVD 288
+ + + A E ++ T SDV+S+GV + EL++ G K D
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 108/245 (44%), Gaps = 28/245 (11%)
Query: 46 NPSSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRP 105
+PS + +E++ +SLA + +VT F LG+G FG V ++
Sbjct: 124 SPSDNSGAEEMEVSLAKP--------KHRVTMNEFEYLKLLGKGTFGKV------ILVKE 169
Query: 106 GLQAQPVAVKNLDLEGLQGHRE---WLTEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYE 161
+ A+K L E + E LTE L RHP L L Y + RL V E
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVME 228
Query: 162 YMPRGSLENQLFRRYSVSLPWSTRMKIALGA--AKGLAFLHDAEKPVIYRDFKASNILLD 219
Y G L L R S R + GA L +LH +EK V+YRD K N++LD
Sbjct: 229 YANGGELFFHLSRERVFS---EDRARF-YGAEIVSALDYLH-SEKNVVYRDLKLENLMLD 283
Query: 220 SDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLE 279
D K++DFGL K+G + D GT Y APE + D + GVV+ E
Sbjct: 284 KDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341
Query: 280 LLSGR 284
++ GR
Sbjct: 342 MMCGR 346
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQLRHPHLV 144
LGEG FG V D + + VAVK+L E H + E+ L L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 145 KLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
K G C E+ L+ E++P GSL+ L + + + ++K A+ KG+ +L
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL--G 143
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYVM 260
+ ++RD A N+L++S++ K+ DFGL K E D + + + APE +M
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 261 TGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+F LK +Q LG+G FG+V D L A VAVK L G R
Sbjct: 7 IFEERHLKYISQ-------LGKGNFGSVELCRYD-PLGDNTGAL-VAVKQLQHSGPDQQR 57
Query: 127 EWLTEVIFLGQLRHPHLVKLIG--YCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
++ E+ L L +VK G Y + LV EY+P G L + +R+ L S
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASR 116
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
+ + KG+ +L + ++RD A NIL++S+ K++DFGLAK P D +V
Sbjct: 117 LLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV- 173
Query: 245 TRVMGTQG--YAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
R G + APE + + SDV+SFGVVL EL +
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 17 LGTGQFGVVKYG----KWRG---QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 125
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+R G++ ++ PE +M
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSR--GSKFPVRWSPPEVLMYS 181
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 230
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 231 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 24/243 (9%)
Query: 46 NPSSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRP 105
+PS + +E++ +SLA + +VT F LG+G FG V ++
Sbjct: 127 SPSDNSGAEEMEVSLAK--------PKHRVTMNEFEYLKLLGKGTFGKV------ILVKE 172
Query: 106 GLQAQPVAVKNLDLEGLQGHRE---WLTEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYE 161
+ A+K L E + E LTE L RHP L L Y + RL V E
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVME 231
Query: 162 YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD 221
Y G L L R S + + +A L +LH +EK V+YRD K N++LD D
Sbjct: 232 YANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKD 288
Query: 222 YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
K++DFGL K+G + D GT Y APE + D + GVV+ E++
Sbjct: 289 GHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 282 SGR 284
GR
Sbjct: 347 CGR 349
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L + +
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 140 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 247
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 248 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHLV 144
LGEG FG V D + + VAVK+L E H L E+ L L H ++V
Sbjct: 17 LGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 145 KLIGYCCEEEHR--LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
K G C E+ L+ E++P GSL+ L + + + ++K A+ KG+ +L
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL--G 131
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG--YAAPEYVM 260
+ ++RD A N+L++S++ K+ DFGL K E D + + + APE +M
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 261 TGHLTSMSDVYSFGVVLLELLS 282
SDV+SFGV L ELL+
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+F LK +Q LG+G FG+V D L A VAVK L G R
Sbjct: 19 IFEERHLKYISQ-------LGKGNFGSVELCRYD-PLGDNTGAL-VAVKQLQHSGPDQQR 69
Query: 127 EWLTEVIFLGQLRHPHLVKLIG--YCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
++ E+ L L +VK G Y + LV EY+P G L + +R+ L S
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASR 128
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
+ + KG+ +L + ++RD A NIL++S+ K++DFGLAK P D +V
Sbjct: 129 LLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV- 185
Query: 245 TRVMGTQG--YAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
R G + APE + + SDV+SFGVVL EL +
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 19 LGGGQFGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 SMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQY 324
SDV++FGV+L E+ + G P + L+E D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMER-- 231
Query: 325 SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P + VAVK L + + + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--------------MK 187
+++ L+G C ++ ++ EY +G+L L R L + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L A K I+RD A N+L+ D K++DFGLA+D D +T
Sbjct: 155 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV+L E+ + S P E L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LF 262
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 263 KLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 84 NFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL-RHPH 142
+ +GEG FG V K I + GL+ + + HR++ E+ L +L HP+
Sbjct: 28 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV---------------SLPWSTRMK 187
++ L+G C + L EY P G+L + R+ V +L +
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A A+G+ +L ++K I+R+ A NIL+ +Y AK++DFGL++ G + +V +
Sbjct: 144 FAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 196
Query: 248 MGT--QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
MG + A E + T+ SDV+S+GV+L E++S
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKG-FIDDKLRPGLQA--QPVAVKNLDLEGLQGHREW 128
++K+ + F LG+G FG V F ++A + V + + D+E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L+ HP L + +E+ V EY+ G L + + L +T
Sbjct: 72 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--Y 124
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A GL FLH K ++YRD K NILLD D K++DFG+ K+ GD +
Sbjct: 125 AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFC 180
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 19 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 SMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQY 324
SDV++FGV+L E+ + G P + L+E D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMER-- 231
Query: 325 SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 92
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 147
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 92
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 147
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 434
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L ++
Sbjct: 435 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESN-- 489
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 549 FSSKSDVWSFGVLMWEAFS 567
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL------PWSTR--MKIA 189
+H ++V L+G C L++ EY G L N L R+ L P R + +
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D + V
Sbjct: 159 SQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+S+G++L E+ S
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 435
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L ++
Sbjct: 436 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESN-- 490
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 550 FSSKSDVWSFGVLMWEAFS 568
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 90
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 91 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 145
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL------PWSTR--MKIA 189
+H ++V L+G C L++ EY G L N L R+ L P R + +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D + V
Sbjct: 167 SQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+S+G++L E+ S
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEV 132
V ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 57
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 117 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 172
Query: 253 YAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ + ++ D++S G + E+++ R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 12 LGTGQFGVVKYG----KWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 120
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+ +G++ ++ PE +M
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLMYS 176
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 225
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 226 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 82
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 83 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 137
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 16 LGTGQFGVVKYG----KWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 124
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+ +G++ ++ PE +M
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLMYS 180
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 229
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 230 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 17 LGTGQFGVVKYG----KWRG---QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 125
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+ +G++ ++ PE +M
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLMYS 181
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 230
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 231 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 76
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 72
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 73 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 127
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 70
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 71 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 125
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + + G + APE +
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 67 VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+F LK +Q LG+G FG+V D L A VAVK L G R
Sbjct: 3 IFEERHLKYISQ-------LGKGNFGSVELCRYD-PLGDNTGAL-VAVKQLQHSGPDQQR 53
Query: 127 EWLTEVIFLGQLRHPHLVKLIG--YCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
++ E+ L L +VK G Y LV EY+P G L + +R+ L S
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRD-FLQRHRARLDASR 112
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
+ + KG+ +L + ++RD A NIL++S+ K++DFGLAK P D V
Sbjct: 113 LLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV- 169
Query: 245 TRVMGTQG--YAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
R G + APE + + SDV+SFGVVL EL +
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 23 LGTGQFGVVKYG----KWRG---QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+ +G++ ++ PE +M
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLMYS 187
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 236
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 237 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 32 LGTGQFGVVKYG----KWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 140
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ---GYAAPEYVMTG 262
++RD A N L++ K+SDFGL++ DD + S+ +G++ ++ PE +M
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLMYS 196
Query: 263 HLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEG 322
+S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL-- 245
Query: 323 QYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 246 -----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQG-HR 126
++K + + +FLGEG F V+K R Q VA+K + L E G +R
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA------RDKNTNQIVAIKKIKLGHRSEAKDGINR 57
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
L E+ L +L HP+++ L+ + + LV+++M LE + + S+ L S
Sbjct: 58 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLE-VIIKDNSLVLTPSHIK 115
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
L +GL +LH + +++RD K +N+LLD + KL+DFGLAK G
Sbjct: 116 AYMLMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXH 171
Query: 247 VMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELL 281
+ T+ Y APE + + + D+++ G +L ELL
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 28/277 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V G K R VA+K + EG E++ E + L H LV+
Sbjct: 32 LGTGQFGVVKYG----KWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G C ++ ++ EYM G L N L R +++ + + +L K
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQ 140
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
++RD A N L++ K+SDFGL++ + ++T + ++ PE +M +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMYSKFS 199
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
S SD+++FGV++ E+ S K P + E A + A+ L R+ P L
Sbjct: 200 SKSDIWAFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGL-RLYRPHL----- 245
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
+ K + Y C + +RPT ++ + + D
Sbjct: 246 --ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 19 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 SMSDVYSFGVVLLELLS-GRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQY 324
SDV++FGV+L E+ + G P + L+E D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMER-- 231
Query: 325 SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 72 ELKVTTQSFSSSNFLGEGGFGAVHKG-FIDDKLRPGLQA--QPVAVKNLDLEGLQGHREW 128
++K+ + F LG+G FG V F ++A + V + + D+E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L+ HP L + +E+ V EY+ G L + + L +T
Sbjct: 71 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--Y 123
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A GL FLH K ++YRD K NILLD D K++DFG+ K+ GD +
Sbjct: 124 AAEIILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFC 179
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + + FLG+GGF ++ I D + A V K++ L+ Q + TE+
Sbjct: 24 TMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIH 80
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP---WSTRMKIALGA 192
L +PH+V G+ +++ +V E R SL RR +V+ P + R I
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 136
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK----DGPEGDDTHVSTRVM 248
+G+ +LH+ VI+RD K N+ L+ D K+ DFGLA DG D +
Sbjct: 137 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD------LC 187
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
GT Y APE + + D++S G +L LL G+ + S
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + + FLG+GGF ++ I D + A V K++ L+ Q + TE+
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIH 96
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP---WSTRMKIALGA 192
L +PH+V G+ +++ +V E R SL RR +V+ P + R I
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK----DGPEGDDTHVSTRVM 248
+G+ +LH+ VI+RD K N+ L+ D K+ DFGLA DG D +
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD------LC 203
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
GT Y APE + + D++S G +L LL G+ + S
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY PRG + +L + + L A L+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANALS 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 128 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 181
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 224
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + ++ A VAVK L RE L +E+ L L H ++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI--------------- 188
V L+G C L++ EY G L N L R+ + T I
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 189 -ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+AFL A K I+RD A NILL K+ DFGLA+D + V
Sbjct: 150 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+S+G+ L EL S S P +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYK 259
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
++ R++ P E + + C P +RPT +V+ +E
Sbjct: 260 MIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 170
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K R + A V K LE + EV
Sbjct: 5 EDFEIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 61
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 119
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 120 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 173
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 216
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 217 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 74 KVTTQSFSSSNF---LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WL 129
K+ S S+ F LGE FG V+KG + PG Q Q VA+K L + RE +
Sbjct: 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST----R 185
E + +L+HP++V L+G +++ +++ Y G L L R S ST
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 186 MKIAL----------GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG 235
+K AL A G+ +L + V+++D N+L+ K+SD GL ++
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 236 PEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
D + + + APE +M G + SD++S+GVVL E+ S
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 123 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 178
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 123 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 178
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----------SLPWSTR-- 185
+H ++V L+G C L++ EY G L N L R+ V + STR
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D + V
Sbjct: 167 LHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+S+G++L E+ S
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG V KG+ K A + + L+ E L E + QL +P++V+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 76
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+IG CE E +LV E G L L + V +++ + G+ +L E
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE--ESN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ--GYAAPEYVMTGH 263
++RD A N+LL + + AK+SDFGL+K D+ + G + APE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 264 LTSMSDVYSFGVVLLELLS 282
+S SDV+SFGV++ E S
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + ++ A VAVK L RE L +E+ L L H ++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI--------------- 188
V L+G C L++ EY G L N L R+ + T I
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 189 -ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+AFL A K I+RD A NILL K+ DFGLA+D + V
Sbjct: 166 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+S+G+ L EL S S P +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYK 275
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
++ R++ P E + + C P +RPT +V+ +E
Sbjct: 276 MIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 84 NFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR--EWLTEVIFLGQLRHP 141
LGEG FG+V +G + + L+ VAVK + L+ E+L+E + HP
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLK---VAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 142 HLVKLIGYCCEEEHR-----LLVYEYMPRGSLENQL-FRRYSVS---LPWSTRMKIALGA 192
++++L+G C E + +++ +M G L L + R +P T +K +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
A G+ +L + + ++RD A N +L D T ++DFGL+K GD
Sbjct: 157 ALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLEL 280
+ A E + TS SDV++FGV + E+
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + ++ A VAVK L RE L +E+ L L H ++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI--------------- 188
V L+G C L++ EY G L N L R+ + T I
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 189 -ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+AFL A K I+RD A NILL K+ DFGLA+D + V
Sbjct: 168 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+S+G+ L EL S S P +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYK 277
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
++ R++ P E + + C P +RPT +V+ +E
Sbjct: 278 MIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 74 KVTTQSFSSSNF---LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WL 129
K+ S S+ F LGE FG V+KG + PG Q Q VA+K L + RE +
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST----R 185
E + +L+HP++V L+G +++ +++ Y G L L R S ST
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 186 MKIAL----------GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG 235
+K AL A G+ +L + V+++D N+L+ K+SD GL ++
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 236 PEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
D + + + APE +M G + SD++S+GVVL E+ S
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + + FLG+GGF ++ I D + A V K++ L+ Q + TE+
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIH 96
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP---WSTRMKIALGA 192
L +PH+V G+ +++ +V E R SL RR +V+ P + R I
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+G+ +LH+ VI+RD K N+ L+ D K+ DFGLA E D T + GT
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKT-LCGTPN 207
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
Y APE + + D++S G +L LL G+ + S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGL-QAQP---VAVKNLDLEG-LQGHREWLTEVIFLGQLRH 140
+GEG FG V + PGL +P VAVK L E ++ E + + +
Sbjct: 55 IGEGAFGRVFQA-----RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-----------------RYSVSLP-- 181
P++VKL+G C + L++EYM G L N+ R R VS P
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 182 ----WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 237
+ ++ IA A G+A+L +E+ ++RD N L+ + K++DFGL+++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 238 GDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
D + PE + T+ SDV+++GVVL E+ S
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----------SLPWSTR-- 185
+H ++V L+G C L++ EY G L N L R+ V + STR
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D + V
Sbjct: 167 LHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+S+G++L E+ S
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR------------ 185
+H ++V L+G C L++ EY G L N L R+ L +S
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 186 --MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHV 243
+ + A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D + V
Sbjct: 167 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+S+G++L E+ S
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT--E 131
K F LG+G FG V F+ K+ Q A+K L L+ T E
Sbjct: 20 KADPSQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
L ++ HP +VKL Y + E +L L+ +++ G L F R S + ++
Sbjct: 77 RDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
A LA H +IYRD K NILLD + KL+DFGL+K+ + + S GT
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y APE V T +D +SFGV++ E+L+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + ++ A VAVK L RE L +E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI--------------- 188
V L+G C L++ EY G L N L R+ + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 189 -ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+AFL A K I+RD A NILL K+ DFGLA+D + V
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+S+G+ L EL S S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYK 282
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
++ R++ P E + + C P +RPT +V+ +E
Sbjct: 283 MIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT--E 131
K F LG+G FG V F+ K+ Q A+K L L+ T E
Sbjct: 20 KADPSQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
L ++ HP +VKL Y + E +L L+ +++ G L F R S + ++
Sbjct: 77 RDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
A LA H +IYRD K NILLD + KL+DFGL+K+ + + S GT
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y APE V T +D +SFGV++ E+L+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 83 SNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPH 142
S +G G FG V+KG K + + + V + E Q R EV L + RH +
Sbjct: 41 STRIGSGSFGTVYKG----KWHGDVAVKILKVVDPTPEQFQAFR---NEVAVLRKTRHVN 93
Query: 143 LVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
++ +GY ++ + +V ++ SL L + + IA A+G+ +LH
Sbjct: 94 ILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH-- 149
Query: 203 EKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM-- 260
K +I+RD K++NI L T K+ DFGLA + + G+ + APE +
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 261 -TGHLTSMSDVYSFGVVLLELLSG 283
+ SDVYS+G+VL EL++G
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV--SLPWSTRMKIALG 191
L +L HP++VKL+ E LV+E++ S++ + F S +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ + ++ D++S G + E+++ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT--E 131
K F LG+G FG V F+ K+ Q A+K L L+ T E
Sbjct: 21 KADPSQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
L ++ HP +VKL Y + E +L L+ +++ G L F R S + ++
Sbjct: 78 RDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 132
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
A LA H +IYRD K NILLD + KL+DFGL+K+ + + S GT
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 190
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y APE V T +D +SFGV++ E+L+G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 22 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 132
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 235
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV--SLPWSTRMKIALG 191
L +L HP++VKL+ E LV+E++ S++ + F S +P
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 113 LLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 168
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ + ++ D++S G + E+++ R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L++ + +P
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L+F H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 65
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 123
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T +S GT Y PE
Sbjct: 124 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPE 177
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 220
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 221 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 23 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV--SLPWSTRMKIALG 191
L +L HP++VKL+ E LV+E++ S++ + F S +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ + ++ D++S G + E+++ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 34 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 86
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 144
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 204 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 247
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 25 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 77
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 135
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 195 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 238
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + + FLG+GGF ++ I D + A V K++ L+ Q + TE+
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIH 96
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP---WSTRMKIALGA 192
L +PH+V G+ +++ +V E R SL RR +V+ P + R I
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
+G+ +LH+ VI+RD K N+ L+ D K+ DFGLA D + GT
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATK--IEFDGERKKXLCGTPN 207
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
Y APE + + D++S G +L LL G+ + S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 23 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 22 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 132
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 235
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 56
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV--SLPWSTRMKIALG 191
L +L HP++VKL+ E LV+E++ S++ + F S +P
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 114 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ + ++ D++S G + E+++ R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 71 AELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE--- 127
A +VT F LG+G FG V ++ + A+K L E + E
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAH 55
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
LTE L RHP L L Y + RL V EY G L L R S +
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
+ +A L +LH +EK V+YRD K N++LD D K++DFGL K+G + D
Sbjct: 115 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKX 169
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 23 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+RD A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 56
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 171
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 56
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 171
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE---WLT 130
+VT F LG+G FG V ++ + A+K L E + E LT
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G L L R S +
Sbjct: 60 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
+ +A L +LH +EK V+YRD K N++LD D K++DFGL K+G + D G
Sbjct: 119 IVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCG 173
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
T Y APE + D + GVV+ E++ GR
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+ ELK F + LG G G V K G I + L+ +P A++N
Sbjct: 10 VGELK--DDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKP-AIRN------- 59
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 60 ---QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEE 114
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHV 243
K+++ +GLA+L + + +++RD K SNIL++S KL DFG++ + +
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----M 169
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWAR 303
+ +GT+ Y APE + H + SD++S G+ L+EL GR + + +++ + R
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI--FGR 227
Query: 304 PMLN 307
P+++
Sbjct: 228 PVVD 231
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 170
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE---WLT 130
+VT F LG+G FG V ++ + A+K L E + E LT
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G L L R S +
Sbjct: 58 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
+ +A L +LH +EK V+YRD K N++LD D K++DFGL K+G + D G
Sbjct: 117 IVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCG 171
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
T Y APE + D + GVV+ E++ GR
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 58
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 118 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 173
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 170
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 172
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 56
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 171
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY PRG + +L + + L A L+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANALS 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 128 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLXGTLDYLPPE 181
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 224
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+ LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 56
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 172
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+ LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 55
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 228 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 280
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 338
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+R+ A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 398 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 441
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 86 LGEGGFGAVHKG-FIDDKLRPGLQAQPVAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHL 143
LG G FG V+KG +I D + PVA+K L + + ++E L E + + P++
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKI---PVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+L+G C +L V + MP G L + + R L + + AKG+++L D
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHV-RENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAK----DGPE--GDDTHVSTRVMGTQGYAAPE 257
+++RD A N+L+ S K++DFGLA+ D E D V + M A E
Sbjct: 140 --LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWM------ALE 191
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLS-GRKSVDKSRPQRE 295
++ T SDV+S+GV + EL++ G K D P RE
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPARE 229
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVIFL 135
++F +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+L HP++VKL+ E LV+E++ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 172
Query: 256 PEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
PE ++ + ++ D++S G + E+++ R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ L+ + +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 172
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTELCGTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRR--------YSVS------LPW 182
+H +++ L+G C ++ ++ EY +G+L L R Y ++ + +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
+ A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 128 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 181
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 224
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 179
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 222
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLL-VYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+F HP LV L C + E RL V EY+ G L + R+ LP +
Sbjct: 105 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAE 161
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+ L +LH E+ +IYRD K N+LLDS+ KL+D+G+ K+G DT ++ GT
Sbjct: 162 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTP 217
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
Y APE + D ++ GV++ E+++GR D
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD---LEGLQGHREWLT 130
+V + + LG G FG V G + L VAVK L+ + L +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVG------KHELTGHKVAVKILNRQKIRSLDVVGKIRR 65
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
E+ L RHPH++KL +V EY+ G L + + + + S R+ +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ G+ + H V++RD K N+LLD+ AK++DFGL+ +G+ S G+
Sbjct: 126 LS--GVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GS 178
Query: 251 QGYAAPEYVMTGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
YAAPE V++G L + D++S GV+L LL G D
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 225 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 277
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 335
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+R+ A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 395 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 438
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 439 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 140 HPHLVKLIGYCCEEEHRLL-VYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
HP LV L C + E RL V EY+ G L + R+ LP + + L +
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNY 121
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH E+ +IYRD K N+LLDS+ KL+D+G+ K+G DT ++ GT Y APE
Sbjct: 122 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEI 177
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
+ D ++ GV++ E+++GR D
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 267 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 319
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G C E ++ E+M G+L + L + + +A + + +L +K
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 377
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
I+R+ A N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 266 SMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYS 325
SDV++FGV+L E+ + S P + D ++ +++ +
Sbjct: 437 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 480
Query: 326 ETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
E K L C P RP+ + + + E +
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCGTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLL-VYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+F HP LV L C + E RL V EY+ G L + R+ LP +
Sbjct: 73 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAE 129
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+ L +LH E+ +IYRD K N+LLDS+ KL+D+G+ K+G DT ++ GT
Sbjct: 130 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTP 185
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
Y APE + D ++ GV++ E+++GR D
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 128 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 181
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 224
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 68 FTLAELKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEG 121
L ELK F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MALGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN----- 52
Query: 122 LQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP 181
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 53 -----QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIP 105
Query: 182 WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT 241
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ G D+
Sbjct: 106 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE- 161
Query: 242 HVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
++ +GT+ Y +PE + H + SD++S G+ L+E+ GR
Sbjct: 162 -MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ-GHREWLTEVI 133
+ + +G G V + K + VA+K ++LE Q E L E+
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPK------KEKVAIKRINLEKCQTSMDELLKEIQ 60
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLF------RRYSVSLPWSTRMK 187
+ Q HP++V ++ LV + + GS+ + + S L ST
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDD---THVS 244
I +GL +LH + I+RD KA NILL D + +++DFG++ G D V
Sbjct: 121 ILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 245 TRVMGTQGYAAPEYV--MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+GT + APE + + G+ +D++SFG+ +EL +G K P + L
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT--- 234
Query: 303 RPMLNDARKLGR-IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
+ ND L + D + +Y ++ RK +L CL P++RPT + +++
Sbjct: 235 --LQNDPPSLETGVQDKEMLKKYGKS-FRKMISL---CLQKDPEKRPTAAELLR 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 34 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFK-AQLEKAGVEHQLRREVEIQSH 90
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 148
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + T + GT Y PE
Sbjct: 149 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPE 202
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 245
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 246 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 128 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 181
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 224
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 7 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 63
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 121
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 122 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 175
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 218
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 219 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 65
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 123
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 177
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 220
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 221 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 25 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFK-AQLEKAGVEHQLRREVEIQSH 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 139
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + T + GT Y PE
Sbjct: 140 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPE 193
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 236
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 237 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + G+ Q VAVK L + RE L +E+ + QL H ++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQ-VAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQL------FRRYSVSLPWSTRMK---------- 187
V L+G C L++EY G L N L F + R++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A AKG+ FL K ++RD A N+L+ K+ DFGLA+D +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
V + APE + G T SDV+S+G++L E+ S
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 140 HPHLVKLIGYCCEEEHRLL-VYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
HP LV L C + E RL V EY+ G L + R+ LP + + L +
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNY 125
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
LH E+ +IYRD K N+LLDS+ KL+D+G+ K+G DT ++ GT Y APE
Sbjct: 126 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEI 181
Query: 259 VMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
+ D ++ GV++ E+++GR D
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 12 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 68
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 126
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 127 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 180
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 223
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 224 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ-GHREWLTEVI 133
+ + +G G V + K + VA+K ++LE Q E L E+
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPK------KEKVAIKRINLEKCQTSMDELLKEIQ 65
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLF------RRYSVSLPWSTRMK 187
+ Q HP++V ++ LV + + GS+ + + S L ST
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDD---THVS 244
I +GL +LH + I+RD KA NILL D + +++DFG++ G D V
Sbjct: 126 ILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 245 TRVMGTQGYAAPEYV--MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+GT + APE + + G+ +D++SFG+ +EL +G K P + L
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT--- 239
Query: 303 RPMLNDARKLGR-IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
+ ND L + D + +Y ++ RK +L CL P++RPT + +++
Sbjct: 240 --LQNDPPSLETGVQDKEMLKKYGKS-FRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPE 179
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 222
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN--LDLEGLQGHREWLTEVI 133
+ ++F +GEG +G V+K R L + VA+K LD E + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 57
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L +L HP++VKL+ E LV+E++ + L+ + +P
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 172
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ + ++ D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNF------LGEGGFGAVHKGFIDDKLRPGLQAQP 111
+ L NL+ ++ + + T+ + +F LG+G FG V+K +K L
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVL---- 64
Query: 112 VAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
A K +D + + +++ E+ L HP++VKL+ E + ++ E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 172 LFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL 231
+ L S + L +LHD + +I+RD KA NIL D KL+DFG+
Sbjct: 125 MLE-LERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 232 AKDGPEGDDTHVSTR---VMGTQGYAAPEYVMTGH-----LTSMSDVYSFGVVLLEL 280
+ +T R +GT + APE VM +DV+S G+ L+E+
Sbjct: 182 S-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEEDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 24/274 (8%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIF 134
VT +F LG+GGFG V + G ++ ++ +G L E
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRAT---GKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 135 LGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L ++ +V L Y E + L LV M G L+ ++ P + + A
Sbjct: 238 LEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
GL LH + ++YRD K NILLD ++SD GLA PEG + RV GT GY
Sbjct: 297 CGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGY 351
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLG 313
APE V T D ++ G +L E+++G+ + + + ++ VE
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE------------- 398
Query: 314 RIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
R++ E +YSE + +A +L Q L P +R
Sbjct: 399 RLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNF------LGEGGFGAVHKGFIDDKLRPGLQAQP 111
+ L NL+ ++ + + T+ + +F LG+G FG V+K +K L
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVL---- 64
Query: 112 VAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
A K +D + + +++ E+ L HP++VKL+ E + ++ E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 172 LFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL 231
+ L S + L +LHD + +I+RD KA NIL D KL+DFG+
Sbjct: 125 MLE-LERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 232 AKDGPEGDDTHVSTR---VMGTQGYAAPEYVMTGH-----LTSMSDVYSFGVVLLEL 280
+ +T R +GT + APE VM +DV+S G+ L+E+
Sbjct: 182 S-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNF------LGEGGFGAVHKGFIDDKLRPGLQAQP 111
+ L NL+ ++ + + T+ + +F LG+G FG V+K +K L
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVL---- 64
Query: 112 VAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
A K +D + + +++ E+ L HP++VKL+ E + ++ E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 172 LFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL 231
+ L S + L +LHD + +I+RD KA NIL D KL+DFG+
Sbjct: 125 MLE-LERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 232 AKDGPEGDDTHVSTR---VMGTQGYAAPEYVMTGH-----LTSMSDVYSFGVVLLEL 280
+ +T R +GT + APE VM +DV+S G+ L+E+
Sbjct: 182 S-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 115/291 (39%), Gaps = 36/291 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL-RHPHL 143
LG G FG V + ++ A VAVK L RE L +E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI--------------- 188
V L+G C L++ EY G L N L R+ + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 189 -ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+AFL A K I+RD A NILL K+ DFGLA+ + V
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+S+G+ L EL S S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYK 282
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
++ R++ P E + + C P +RPT +V+ +E
Sbjct: 283 MIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQ-PVAVKNLDLEGLQG---HREWLTEVIFLGQLRHP 141
LGEG FG V KL + Q VA+K + + L+ H E+ +L LRHP
Sbjct: 17 LGEGSFGKV-------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
H++KL ++V EY G L + + + ++ R + A H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
+++RD K N+LLD + K++DFGL+ +G+ S G+ YAAPE V+
Sbjct: 129 ----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VIN 180
Query: 262 GHLTS--MSDVYSFGVVLLELLSGRKSVD 288
G L + DV+S G+VL +L GR D
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 85
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 86 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 144 KDLVSCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 254
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 255 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 24/274 (8%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIF 134
VT +F LG+GGFG V + G ++ ++ +G L E
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRAT---GKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 135 LGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
L ++ +V L Y E + L LV M G L+ ++ P + + A
Sbjct: 238 LEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
GL LH + ++YRD K NILLD ++SD GLA PEG + RV GT GY
Sbjct: 297 CGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGY 351
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLG 313
APE V T D ++ G +L E+++G+ + + + ++ VE
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE------------- 398
Query: 314 RIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
R++ E +YSE + +A +L Q L P +R
Sbjct: 399 RLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 87
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 88 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 146 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 256
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 257 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL---EGLQGHREWLT 130
K+ + + + LG GG V+ + VA+K + + E + + +
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLA------EDTILNIKVAIKAIFIPPREKEETLKRFER 60
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV QL H ++V +I E++ LV EY+ +L + +S+ T +
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV--DTAINFTN 118
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
G+ HD +++RD K NIL+DS+ T K+ DFG+AK E T + V+GT
Sbjct: 119 QILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGT 175
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
Y +PE +D+YS G+VL E+L G
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIFLGQL-RHP 141
LGEG FG V + DK +P +A VAVK L + + + ++E+ + + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK-------------- 187
+++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D +T
Sbjct: 154 CTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + T SDV+SFGV++ E+ + S P E L
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----------LF 261
Query: 308 DARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
K G MD + + C P QRPT +V+ L+
Sbjct: 262 KLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 113/280 (40%), Gaps = 33/280 (11%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG--DDTHVSTRVMGTQGYAA 255
+ H K VI+RD K N+LL S K++DFG + P DD + GT Y
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD------LCGTLDYLP 177
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRI 315
PE + D++S GV+ E L G+ + + Q +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------------- 222
Query: 316 MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 ---RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 93/220 (42%), Gaps = 21/220 (9%)
Query: 71 AELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW-- 128
A KVT F LG+G FG V +R + A+K L E + E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 129 -LTEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+TE L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEER 109
Query: 187 KIALGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATM 165
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 144
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 145 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 203 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 313
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 314 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 113/280 (40%), Gaps = 33/280 (11%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 34 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFK-AQLEKAGVEHQLRREVEIQSH 90
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 148
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG--DDTHVSTRVMGTQGYAA 255
+ H K VI+RD K N+LL S K++DFG + P DD + GT Y
Sbjct: 149 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD------LCGTLDYLP 200
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRI 315
PE + D++S GV+ E L G+ + + Q +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------------- 245
Query: 316 MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 246 ---RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-----QGHREWLTEVIFLGQLRH 140
LGEG FG V + Q VA+K ++ + L QG E E+ +L LRH
Sbjct: 22 LGEGSFGKVKLAY------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 73
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
PH++KL ++ ++V EY L + + +R +S + R + +A H
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++RD K N+LLD K++DFGL+ +G+ S G+ YAAPE V+
Sbjct: 133 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VI 184
Query: 261 TGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
+G L + DV+S GV+L +L R D
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-----QGHREWLTEVIFLGQLRH 140
LGEG FG V + Q VA+K ++ + L QG E E+ +L LRH
Sbjct: 21 LGEGSFGKVKLAY------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 72
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
PH++KL ++ ++V EY L + + +R +S + R + +A H
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++RD K N+LLD K++DFGL+ +G+ S G+ YAAPE V+
Sbjct: 132 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VI 183
Query: 261 TGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
+G L + DV+S GV+L +L R D
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 36 LGRGAFGQVIEADAFGIDK---TATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 91
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTRMKI----------- 188
++V L+G C + L+V E+ G+L L + + +P+ T +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 189 --ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
+ AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+++ F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN---------- 49
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV------DKSRP 292
+GT+ Y +PE + H + SD++S G+ L+E+ GR + + SRP
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-----QGHREWLTEVIFLGQLRH 140
LGEG FG V + Q VA+K ++ + L QG E E+ +L LRH
Sbjct: 12 LGEGSFGKVKLAY------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 63
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
PH++KL ++ ++V EY L + + +R +S + R + +A H
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++RD K N+LLD K++DFGL+ +G+ S G+ YAAPE V+
Sbjct: 123 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VI 174
Query: 261 TGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
+G L + DV+S GV+L +L R D
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH---REWLTEVIF 134
+ F N LG+G F V++ + + GL+ VA+K +D + + + EV
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA---ESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--MKIALGA 192
QL+HP +++L Y + + LV E G + L R P+S
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQI 121
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
G+ +LH +++RD SN+LL + K++DFGLA + H + + GT
Sbjct: 122 ITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
Y +PE SDV+S G + LL GR D
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG-LQAQPVAVKNLDLEGLQGHREWLTEV 132
K+ + F LG+GG+G V + G + A V K + + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRR----YSVSLPWSTRMK 187
L +++HP +V LI Y + +L L+ EY+ G L QL R + + +
Sbjct: 73 NILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ALG H +K +IYRD K NI+L+ KL+DFGL K+ D V+
Sbjct: 132 MALG--------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHXF 181
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG---------RKSVDK 289
GT Y APE +M D +S G ++ ++L+G +K++DK
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 113/279 (40%), Gaps = 31/279 (11%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 65
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 123
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG-DDTHVSTRVMGTQGYAAP 256
+ H K VI+RD K N+LL S K++DFG + P DT + GT Y P
Sbjct: 124 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-----LCGTLDYLPP 176
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
E + D++S GV+ E L G+ + + Q +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---------------- 220
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 221 --RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K+++FG + P T + GT Y PE
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDYLPPE 179
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 222
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 10 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 66
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 124
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K+++FG + P T + GT Y PE
Sbjct: 125 YCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTTLCGTLDYLPPE 178
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 221
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 222 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG-LQAQPVAVKNLDLEGLQGHREWLTEV 132
K+ + F LG+GG+G V + G + A V K + + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRR----YSVSLPWSTRMK 187
L +++HP +V LI Y + +L L+ EY+ G L QL R + + +
Sbjct: 73 NILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ALG H +K +IYRD K NI+L+ KL+DFGL K+ D V+
Sbjct: 132 MALG--------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHTF 181
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG---------RKSVDK 289
GT Y APE +M D +S G ++ ++L+G +K++DK
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 86 LGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
LG G FG V + G D L+ VAVK L +E L +E+ + L
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 139 -RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSL----------------- 180
+H ++V L+G C L++ EY G L N L R+ L
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 181 --PWSTR--MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 236
P R + + A+G+AFL A K I+RD A N+LL + + AK+ DFGLA+D
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 237 EGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ V + APE + T SDV+S+G++L E+ S
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 29/285 (10%)
Query: 71 AELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT 130
A+ + + F LG+G FG V+ +K + A V K LE +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVY--LAREKNSKFILALKVLFKA-QLEKAGVEHQLRR 57
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV LRHP++++L GY + L+ EY P G++ +L + + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
A L++ H K VI+RD K N+LL S K++DFG + P + GT
Sbjct: 118 --ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCGT 169
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDAR 310
Y PE + D++S GV+ E L G+ + + Q + +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-------------DTYK 216
Query: 311 KLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
++ R+ E + + A L + L H P QRP + V++
Sbjct: 217 RISRV-----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 114/285 (40%), Gaps = 29/285 (10%)
Query: 71 AELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT 130
A+ + + F LG+G FG V+ +K + A V K LE +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRR 57
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV LRHP++++L GY + L+ EY P G++ +L + + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
A L++ H K VI+RD K N+LL S K++DFG + P + GT
Sbjct: 118 --ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCGT 169
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDAR 310
Y PE + D++S GV+ E L G+ + + Q +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---------- 219
Query: 311 KLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD---LEGLQGHREWLT 130
+V + + LG G FG V G L VAVK L+ + L +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
E+ L RHPH++KL +V EY+ G L + + + V + R+ +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
+A H V++RD K N+LLD+ AK++DFGL+ +G+ S G+
Sbjct: 121 LSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GS 173
Query: 251 QGYAAPEYVMTGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
YAAPE V++G L + D++S GV+L LL G D
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 109
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 YGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXF 165
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ EY +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + +++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-----QGHREWLTEVIFLGQLRH 140
LGEG FG V + Q VA+K ++ + L QG E E+ +L LRH
Sbjct: 16 LGEGSFGKVKLAY------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 67
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
PH++KL ++ ++V EY L + + +R +S + R + +A H
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++RD K N+LLD K++DFGL+ +G+ S G+ YAAPE V+
Sbjct: 127 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VI 178
Query: 261 TGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
+G L + DV+S GV+L +L R D
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 10 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 66
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 124
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 125 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPE 178
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 221
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 222 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+++ F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN---------- 49
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+ ELK F + LG G G V K G + + L+ +P A++N
Sbjct: 62 VGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN------- 111
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 112 ---QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQ 166
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHV 243
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ G D +
Sbjct: 167 ILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 221
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+ +GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 109
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 YGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXF 165
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 60 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 114
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 115 YGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXF 170
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 109
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 YGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXF 165
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 109
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 YGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTF 165
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LT 130
KVT F LG+G FG V +R + A+K L E + E +T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA 189
E L RHP L L Y + RL V EY G +LF S ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARF 109
Query: 190 LGA--AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
GA L +LH + V+YRD K N++LD D K++DFGL K+G D
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTF 165
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCGTLDYLPPE 179
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 222
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 126 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPE 179
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 222
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
+ F LG+G FG V+ +K + A V K LE + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
LRHP++++L GY + L+ EY P G++ +L + + L A L+
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALS 122
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 123 YCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYLPPE 176
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMD 317
+ D++S GV+ E L G+ + + Q +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------------- 219
Query: 318 PRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
R+E + + A L + L H P QRP + V++
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+++ F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN---------- 49
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+ ELK F + LG G G V K G + + L+ +P A++N
Sbjct: 19 VGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN------- 68
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 69 ---QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQ 123
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHV 243
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ G D +
Sbjct: 124 ILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 178
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
+ +GT+ Y +PE + H + SD++S G+ L+E+ GR
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V K K R Q V V N + L EV L +L HP+++K
Sbjct: 30 LGKGSFGEVLKC----KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L + +V E G L +++ +R S + R I G+ ++H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMH--KHN 141
Query: 206 VIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTG 262
+++RD K NILL+S D K+ DFGL+ + +T + R+ GT Y APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPE-VLRG 197
Query: 263 HLTSMSDVYSFGVVLLELLSG 283
DV+S GV+L LLSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+ ELK F + LG G G V K G + + L+ +P A++N
Sbjct: 27 VGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN------- 76
Query: 124 GHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWS 183
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 77 ---QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQ 131
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHV 243
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ G D +
Sbjct: 132 ILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 186
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+ +GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+++ F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN---------- 49
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHK------GFIDDKLRPGLQAQPVAVKNLDLEGLQGHR 126
+++ F + LG G G V K G + + L+ +P A++N
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN---------- 49
Query: 127 EWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM 186
+ + E+ L + P++V G + + E+M GSL+ L + + +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSV 287
+GT+ Y +PE + H + SD++S G+ L+E+ GR +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD---LEGLQGHREWLT 130
+V + + LG G FG V G L VAVK L+ + L +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
E+ L RHPH++KL +V EY+ G L + + + V + R+ +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
+A H V++RD K N+LLD+ AK++DFGL+ +G+ S G+
Sbjct: 121 LSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GS 173
Query: 251 QGYAAPEYVMTGHLTS--MSDVYSFGVVLLELLSGRKSVD 288
YAAPE V++G L + D++S GV+L LL G D
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G G V+ Q VA++ ++L+ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ + +V EY+ GSL + + + + + L FLH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ PE + ST V GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 265 TSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEW-ARPMLNDARKLGRI 315
D++S G++ +E++ G P R L+ P L + KL I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G G V+ Q VA++ ++L+ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ + +V EY+ GSL + + + + + L FLH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ PE + ++GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAY 193
Query: 265 TSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEW-ARPMLNDARKLGRI 315
D++S G++ +E++ G P R L+ P L + KL I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 121/296 (40%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ Y +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 90
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTRMK----------IA 189
++V L+G C + L+V E+ G+L L + + +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKT---ATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 81
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 49/227 (21%)
Query: 89 GGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE--VIFLGQLRHPHLVKL 146
G FG V K L + VAVK + Q + W E V L ++H ++++
Sbjct: 35 GRFGCVWKA--------QLLNEYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQF 83
Query: 147 IGYCCEEEHR--------LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
IG E R L+ + +GSL + F + +V + W+ IA A+GLA+
Sbjct: 84 IG----AEKRGTSVDVDLWLITAFHEKGSLSD--FLKANV-VSWNELCHIAETMARGLAY 136
Query: 199 LH-------DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLA---KDGPEGDDTHVSTRV 247
LH D KP I +RD K+ N+LL ++ TA ++DFGLA + G DTH
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--- 193
Query: 248 MGTQGYAAPEYVMTGHLTSMS------DVYSFGVVLLELLSGRKSVD 288
+GT+ Y APE V+ G + D+Y+ G+VL EL S + D
Sbjct: 194 VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLTEVIFLGQLRHP 141
+GEG +G V+K Q + VA+K + L EG+ + E+ L +L HP
Sbjct: 29 VGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHP 79
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGLAFLH 200
++V LI E LV+E+M + ++ L +++KI L +G+A H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH 136
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+ +++RD K N+L++SD KL+DFGLA+ G T + T Y AP+ +M
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 261 TGHLTSMS-DVYSFGVVLLELLSGR 284
S S D++S G + E+++G+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G G V+ Q VA++ ++L+ + E++ + + ++P++V
Sbjct: 29 IGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ + +V EY+ GSL + + + + + L FLH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ PE + ++GT + APE V
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 194
Query: 265 TSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEW-ARPMLNDARKLGRI 315
D++S G++ +E++ G P R L+ P L + KL I
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 90
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTRMK----------IA 189
++V L+G C + L+V E+ G+L L + + +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 92
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR------------MK 187
++V L+G C + L+V E+ G+L L + + +P+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLTEVIFLGQLRHP 141
+GEG +G V+K Q + VA+K + L EG+ + E+ L +L HP
Sbjct: 29 VGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHP 79
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGLAFLH 200
++V LI E LV+E+M + ++ L +++KI L +G+A H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH 136
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+ +++RD K N+L++SD KL+DFGLA+ G T + T Y AP+ +M
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 261 TGHLTSMS-DVYSFGVVLLELLSGR 284
S S D++S G + E+++G+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDK---TATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 90
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G G V+ Q VA++ ++L+ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ + +V EY+ GSL + + + + + L FLH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ PE + ++GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 193
Query: 265 TSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEW-ARPMLNDARKLGRI 315
D++S G++ +E++ G P R L+ P L + KL I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKT---ATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 81
Query: 141 PHLVKLIGYCCEEEHRLLV-YEYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V K K R Q V V N + L EV L +L HP+++K
Sbjct: 30 LGKGSFGEVLKC----KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L + +V E G L +++ +R S + R I G+ ++H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMH--KHN 141
Query: 206 VIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTG 262
+++RD K NILL+S D K+ DFGL+ + +T + R+ GT Y APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPE-VLRG 197
Query: 263 HLTSMSDVYSFGVVLLELLSG 283
DV+S GV+L LLSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V K K R Q V V N + L EV L +L HP+++K
Sbjct: 30 LGKGSFGEVLKC----KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L + +V E G L +++ +R S + R I G+ ++H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMH--KHN 141
Query: 206 VIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTG 262
+++RD K NILL+S D K+ DFGL+ + +T + R+ GT Y APE V+ G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPE-VLRG 197
Query: 263 HLTSMSDVYSFGVVLLELLSG 283
DV+S GV+L LLSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 34/237 (14%)
Query: 62 GSNLH----VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
G +LH +F + + + LG+G FG V DK+ Q AVK +
Sbjct: 29 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKI----TGQECAVKVI 82
Query: 118 DLEGLQGHRE---WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR 174
++ + L EV L QL HP+++KL + ++ + LV E G L +++
Sbjct: 83 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 142
Query: 175 RYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGL 231
R S + R I G+ ++H + +++RD K N+LL+S D ++ DFGL
Sbjct: 143 RKRFSEVDAAR--IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGL 198
Query: 232 AKDGPEGDDTHVSTRV-----MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ TH +GT Y APE V+ G DV+S GV+L LLSG
Sbjct: 199 S--------THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 34/237 (14%)
Query: 62 GSNLH----VFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
G +LH +F + + + LG+G FG V DK+ Q AVK +
Sbjct: 30 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKI----TGQECAVKVI 83
Query: 118 DLEGLQGHRE---WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR 174
++ + L EV L QL HP+++KL + ++ + LV E G L +++
Sbjct: 84 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 143
Query: 175 RYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGL 231
R S + R I G+ ++H + +++RD K N+LL+S D ++ DFGL
Sbjct: 144 RKRFSEVDAAR--IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGL 199
Query: 232 AKDGPEGDDTHVSTRV-----MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ TH +GT Y APE V+ G DV+S GV+L LLSG
Sbjct: 200 S--------THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT--E 131
K F LG+G FG V F+ K+ A+K L L+ T E
Sbjct: 24 KADPSHFELLKVLGQGSFGKV---FLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIAL 190
L + HP +VKL Y + E +L + RG LF R S + ++ +K L
Sbjct: 81 RDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRG---GDLFTRLSKEVMFTEEDVKFYL 136
Query: 191 GA-AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
A GL LH +IYRD K NILLD + KL+DFGL+K+ + + S G
Sbjct: 137 AELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCG 192
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T Y APE V + +D +S+GV++ E+L+G
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 121/296 (40%), Gaps = 47/296 (15%)
Query: 86 LGEGGFGAV--HKGFIDDKLRPGLQAQPVAVKNL-------DLEGLQGHREWLTEVIFLG 136
LGEG FG V + DK +P +A VAVK L DL L E + +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMK---MIG 98
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--------- 187
+H +++ L+G C ++ ++ Y +G+L L R + +S +
Sbjct: 99 --KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 188 -----IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
A+G+ +L A + I+RD A N+L+ + K++DFGLA+D D
Sbjct: 157 KDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
+T + APE + T SDV+SFGV++ E+ + S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
L K G MD + + C P QRPT +V+ L+
Sbjct: 268 ---LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + F LG+G FG V+ ++ + A V K LE + EV
Sbjct: 10 TLEDFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQ 66
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
LRHP++++L GY + L+ EY P G++ +L ++ S T I A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELANA 124
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L++ H K VI+RD K N+LL S+ K++DFG + P T + GT Y
Sbjct: 125 LSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RTTLCGTLDYLP 178
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ---REQSLVEWARPMLNDARKL 312
PE + D++S GV+ E L G + Q R S VE+ P
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP-------- 230
Query: 313 GRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
+ GAR L + L H QR T++ V++
Sbjct: 231 ----------DFVTEGARD---LISRLLKHNASQRLTLAEVLE 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDK---TATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 90
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV + L HP++
Sbjct: 15 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + Y V+ W MK AK +
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFD-----YLVAHGW---MKEKEARAKFRQIVSAVQ 120
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G+ YAAPE
Sbjct: 121 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 175
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
DV+S GV+L L+SG S P Q+L E +L ++ M
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYM 229
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKT---------------LEPLK 361
E L + L P +R T+ ++K +EPL
Sbjct: 230 STDCEN------------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 277
Query: 362 DFDD 365
D+ D
Sbjct: 278 DYKD 281
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKT---ATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 81
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQL 138
++ ++GEG +G V + D +R VA+K + E + L E+ L +
Sbjct: 45 YTQLQYIGEGAYGMVSSAY--DHVR----KTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRY-SVSLPWSTRMKIALGAAKGLA 197
RH +++ + + Y+ + +E L++ S L +GL
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAAP 256
++H A V++RD K SN+L+++ K+ DFGLA+ PE D T T + T+ Y AP
Sbjct: 159 YIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 257 EYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
E ++ T D++S G +L E+LS R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDK---TATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 81
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 122/304 (40%), Gaps = 61/304 (20%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
DV+S GV+L L+SG S P Q+L E +L ++ M
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKT---------------LEPLK 361
E L + L P +R T+ ++K +EPL
Sbjct: 237 STDCEN------------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
Query: 362 DFDD 365
D+ D
Sbjct: 285 DYKD 288
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPG-LQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQLRHPHL 143
+G GGF V KL L + VA+K +D L + TE+ L LRH H+
Sbjct: 18 IGTGGFAKV-------KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
+L +V EY P G L + + + +S TR+ + +A++H
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRV-VFRQIVSAVAYVH--S 126
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM-TG 262
+ +RD K N+L D + KL DFGL D H+ T G+ YAAPE +
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKS 185
Query: 263 HLTSMSDVYSFGVVLLELLSG 283
+L S +DV+S G++L L+ G
Sbjct: 186 YLGSEADVWSMGILLYVLMCG 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDK---TATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 90
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 89 GGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE--VIFLGQLRHPHLVKL 146
G FG V K + + VAVK L Q + W +E + ++H +L++
Sbjct: 26 GRFGCVWKAQLMNDF--------VAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQF 74
Query: 147 I-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
I G E E L+ + +GSL + L + W+ +A ++GL++LH+
Sbjct: 75 IAAEKRGSNLEVE-LWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHE 130
Query: 202 --------AEKPVI-YRDFKASNILLDSDYTAKLSDFGLA---KDGPEGDDTHVSTRVMG 249
KP I +RDFK+ N+LL SD TA L+DFGLA + G DTH +G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ---VG 187
Query: 250 TQGYAAPEYVMTGHLTSMS------DVYSFGVVLLELLSGRKSVD 288
T+ Y APE V+ G + D+Y+ G+VL EL+S K+ D
Sbjct: 188 TRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 143 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 140 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 143
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 144 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 134
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 135 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE---WLTE 131
+ + + LG+G FG V DK+ Q AVK + ++ + L E
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVI--LCKDKI----TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
V L QL HP+++KL + ++ + LV E G L +++ R S + R I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQ 134
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRV- 247
G+ ++H + +++RD K N+LL+S D ++ DFGL+ TH
Sbjct: 135 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKK 184
Query: 248 ----MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+GT Y APE V+ G DV+S GV+L LLSG
Sbjct: 185 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 135
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 136 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 47/227 (20%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE--VIFLGQLRHPH 142
+G G +GAV+KG +D++ PVAVK Q ++ E + + + H +
Sbjct: 20 LIGRGRYGAVYKGSLDER--------PVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 143 LVKLIGYCCEEE-------HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
+ + I +E LLV EY P GSL L S W + ++A +G
Sbjct: 69 IARFI--VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRG 123
Query: 196 LAFLH------DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLA------KDGPEGDDTH 242
LA+LH D KP I +RD + N+L+ +D T +SDFGL+ + G++ +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 243 VSTRVMGTQGYAAPEYVMTGHLT--------SMSDVYSFGVVLLELL 281
+ +GT Y APE V+ G + D+Y+ G++ E+
Sbjct: 184 AAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 22/254 (8%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+GEG G V R + VAVK +DL Q EV+ + +H ++V+
Sbjct: 53 IGEGSTGIVCLA------REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ E ++ E++ G+L + + + V L + + LA+LH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLH--AQG 161
Query: 206 VIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
VI+RD K+ +ILL D KLSDFG ++KD P+ ++GT + APE +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISR 215
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKSRP-QREQSLVEWARPMLNDARKLGRIMDPRL 320
+ D++S G++++E++ G P Q + L + P L ++ K+ ++ L
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFL 275
Query: 321 EGQYSETGARKAAA 334
E +A A
Sbjct: 276 ERMLVRDPQERATA 289
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G+G G V+ Q VA++ ++L+ + E++ + + ++P++V
Sbjct: 29 IGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
+ + +V EY+ GSL + + + + + L FLH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
VI+R+ K+ NILL D + KL+DFG A+ PE + ST V GT + APE V
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 265 TSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEW-ARPMLNDARKLGRI 315
D++S G++ +E++ G P R L+ P L + KL I
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 115/298 (38%), Gaps = 61/298 (20%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
F +G GGFG V K + + + +K + + RE V L +L
Sbjct: 13 FKEIELIGSGGFGQVFKA------KHRIDGKTYVIKRVKYNNEKAERE----VKALAKLD 62
Query: 140 HPHLVKLIG------YCCEEEHR----------LLVYEYMPRGSLENQLFRRYSVSLPWS 183
H ++V G Y E + + E+ +G+LE + +R L
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA----KDGPEGD 239
+++ KG+ ++H K +I RD K SNI L K+ DFGL DG
Sbjct: 123 LALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-- 178
Query: 240 DTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
R GT Y +PE + + D+Y+ G++L ELL
Sbjct: 179 -----XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----------------- 216
Query: 300 EWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
+ + A + + +G S+ +K L + LS +P+ RP S +++TL
Sbjct: 217 -----VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQL 138
+++ +++GEG +G V + L VA+K + E + L E+ L +
Sbjct: 23 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGLA 197
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAAP 256
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y AP
Sbjct: 137 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 257 EYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
E ++ T D++S G +L E+LS R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 127
Query: 141 PHLVKLIGYCCEEEHRLLV-YEYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 24/240 (10%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI 133
++ +F LG+G FG V + K L A V K++ L+ + I
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARV--KETGDLYAVKVLKKDVILQDDDVECTMTEKRI 76
Query: 134 FLGQLRHPHLVKLIGYCCEE--EHRLLVYEYMPRGSL--ENQLFRRYSVSLPWSTRMKI- 188
HP L +L +CC + + V E++ G L Q RR+ R +
Sbjct: 77 LSLARNHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-----EARARFY 129
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A L FLHD K +IYRD K N+LLD + KL+DFG+ K+G T +
Sbjct: 130 AAEIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFC 185
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLND 308
GT Y APE + D ++ GV+L E+L G + + E L E +LND
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA---ENEDDLFE---AILND 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 146 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 138 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 158 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 121/304 (39%), Gaps = 61/304 (20%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
DV+S GV+L L+SG S P Q+L E +L ++ M
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKT---------------LEPLK 361
E L + L P +R T+ ++K +EPL
Sbjct: 237 STDCEN------------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
Query: 362 DFDD 365
D+ D
Sbjct: 285 DYKD 288
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 69 TLAEL---KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN-LDLEGLQG 124
LAE+ K T F LG+G FG V+ +K + A V K+ L+ EG++
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 59
Query: 125 HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
+ E+ LRHP+++++ Y + + L+ E+ PRG L +L + S
Sbjct: 60 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
L A L + H E+ VI+RD K N+L+ K++DFG + P +
Sbjct: 119 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LR 169
Query: 245 TRVM-GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
R M GT Y PE + D++ GV+ E L G D
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVD 288
DV+S GV+L L+SG D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 86 LGEGGFGAVHKG--FIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQL-RH 140
LG G FG V + F DK + VAVK L EG HR ++E+ L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLK-EGATHSEHRALMSELKILIHIGHH 92
Query: 141 PHLVKLIGYCCEEEHRLLVY-EYMPRGSLENQLFRRYSVSLPWSTR-------------- 185
++V L+G C + L+V E+ G+L L + + +P+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
+ + AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 140 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFL 135
T + F LG+G FG V+ ++ + A V K LE + EV
Sbjct: 10 TLEDFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQ 66
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
LRHP++++L GY + L+ EY P G++ +L ++ S T I A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELANA 124
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG-DDTHVSTRVMGTQGYA 254
L++ H K VI+RD K N+LL S+ K++DFG + P DT + GT Y
Sbjct: 125 LSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-----LCGTLDYL 177
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ---REQSLVEWARPMLNDARK 311
PE + D++S GV+ E L G + Q R S VE+ P
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP------- 230
Query: 312 LGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
+ GAR L + L H QR T++ V++
Sbjct: 231 -----------DFVTEGARD---LISRLLKHNASQRLTLAEVLE 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 69 TLAEL---KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN-LDLEGLQG 124
LAE+ K T F LG+G FG V+ +K + A V K+ L+ EG++
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 58
Query: 125 HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
+ E+ LRHP+++++ Y + + L+ E+ PRG L +L + S
Sbjct: 59 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
L A L + H E+ VI+RD K N+L+ K++DFG + P +
Sbjct: 118 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LR 168
Query: 245 TRVM-GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
R M GT Y PE + D++ GV+ E L G D
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE---WLTE 131
+ + + LG+G FG V DK+ Q AVK + ++ + L E
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVI--LCKDKI----TGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
V L QL HP+++KL + ++ + LV E G L +++ R S + R I
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQ 140
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRV- 247
G+ ++H + +++RD K N+LL+S D ++ DFGL+ TH
Sbjct: 141 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKK 190
Query: 248 ----MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+GT Y APE V+ G DV+S GV+L LLSG
Sbjct: 191 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL-DLEGLQGHREWLTEVIFLGQLRHPHLV 144
+G+G +G V G + + VAVK E RE TE+ +RH +++
Sbjct: 45 IGKGRYGEVWMG--------KWRGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENIL 94
Query: 145 KLIGYCCE----EEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
I + L+ +Y GSL + L S +L + +K+A + GL LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 201 DA-----EKPVI-YRDFKASNILLDSDYTAKLSDFGLA----KDGPEGDDTHVSTRVMGT 250
KP I +RD K+ NIL+ + T ++D GLA D E D +TRV GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV-DIPPNTRV-GT 209
Query: 251 QGYAAPEY----VMTGHLTS--MSDVYSFGVVLLELLSGRKSVDKSRPQREQ----SLVE 300
+ Y PE + H S M+D+YSFG++L E+ R+ V + Q LV
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVP 267
Query: 301 WARPMLNDARKLGRI--MDPRLEGQY-SETGARKAAALAYQCLSHRPKQRPTMSTVVKTL 357
+ P D R++ I + P ++ S+ R+ L +C +H P R T V KTL
Sbjct: 268 -SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326
Query: 358 EPLKDFDD 365
+ + D
Sbjct: 327 AKMSESQD 334
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 122/304 (40%), Gaps = 61/304 (20%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAV+ +D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPE 182
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
DV+S GV+L L+SG S P Q+L E +L ++ M
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKT---------------LEPLK 361
E L + L P +R T+ ++K +EPL
Sbjct: 237 STDCEN------------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
Query: 362 DFDD 365
D+ D
Sbjct: 285 DYKD 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 122/304 (40%), Gaps = 61/304 (20%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAV+ +D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
DV+S GV+L L+SG S P Q+L E +L ++ M
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKT---------------LEPLK 361
E L + L P +R T+ ++K +EPL
Sbjct: 237 STDCEN------------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLP 284
Query: 362 DFDD 365
D+ D
Sbjct: 285 DYKD 288
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL---DLEGLQGHREWLTEV 132
T +F +G G F V++ L PVA+K + DL + + + E+
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAAC------LLDGVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQL--FRRYSVSLPWSTRMKIAL 190
L QL HP+++K E+ +V E G L + F++ +P T K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
L +H + V++RD K +N+ + + KL D GL + T + ++GT
Sbjct: 144 QLCSALEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGT 199
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLEL 280
Y +PE + SD++S G +L E+
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 69 TLAEL---KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN-LDLEGLQG 124
LAE+ K T F LG+G FG V+ +K + A V K+ L+ EG++
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 58
Query: 125 HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWST 184
+ E+ LRHP+++++ Y + + L+ E+ PRG L +L + S
Sbjct: 59 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS 244
L A L + H E+ VI+RD K N+L+ K++DFG + P +
Sbjct: 118 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LR 168
Query: 245 TRVM-GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD 288
R M GT Y PE + D++ GV+ E L G D
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ--GHREWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV + L HP++
Sbjct: 23 IGKGNFAKVKLA------RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ LV EY G + + L RMK AK +
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 128
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD D K++DFG + + G+ G+ YAAPE
Sbjct: 129 YCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPE 183
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSG 283
DV+S GV+L L+SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA++ + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-------VAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+ Y A
Sbjct: 140 KYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 81 SSSNF-----LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH-REWLTEVIF 134
SSS F LG G + V+KG VA+K + L+ +G + E+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTT------GVYVALKEVKLDSEEGTPSTAIREISL 56
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYM----------------PRGSLENQLFRRYSV 178
+ +L+H ++V+L E LV+E+M PRG LE L + +
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG-LELNLVKYFQW 115
Query: 179 SLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 238
L +GLAF H E +++RD K N+L++ KL DFGLA+
Sbjct: 116 QL------------LQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161
Query: 239 DDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGR 284
+T S V T Y AP+ +M S S D++S G +L E+++G+
Sbjct: 162 VNTFSSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 36/265 (13%)
Query: 83 SNFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRH 140
+NF+ GEG G V I + G Q VAVK +DL Q EV+ + H
Sbjct: 48 ANFIKIGEGSTGIV---CIATEKHTGKQ---VAVKKMDLRKQQRRELLFNEVVIMRDYHH 101
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAK 194
++V + + +V E++ G+L + + TRM + L +
Sbjct: 102 DNVVDMYSSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIATVCLSVLR 152
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDTHVSTRVMGT 250
L++LH+ + VI+RD K+ +ILL SD KLSDFG ++K+ P+ ++GT
Sbjct: 153 ALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK------RKXLVGT 204
Query: 251 QGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRP-QREQSLVEWARPMLNDA 309
+ APE + + D++S G++++E++ G P Q + + + P + D
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDL 264
Query: 310 RKLGRIMDPRLEGQYSETGARKAAA 334
K+ ++ L+ +++A A
Sbjct: 265 HKVSSVLRGFLDLMLVREPSQRATA 289
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V+K +K L A K ++ + + +++ E+ L HP++VK
Sbjct: 27 LGDGAFGKVYKA--KNKETGAL----AAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G + ++ E+ P G++ + + L + + L FLH K
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS--KR 137
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
+I+RD KA N+L+ + +L+DFG++ + S +GT + APE VM +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMK 195
Query: 266 SM-----SDVYSFGVVLLEL 280
+D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G FG V+K +K L A K ++ + + +++ E+ L HP++VK
Sbjct: 19 LGDGAFGKVYKA--KNKETGAL----AAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L+G + ++ E+ P G++ + + L + + L FLH K
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS--KR 129
Query: 206 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLT 265
+I+RD KA N+L+ + +L+DFG++ + S +GT + APE VM +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMK 187
Query: 266 SM-----SDVYSFGVVLLEL 280
+D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T + T+ Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 80 FSSSNFLGEGGFGAVHKGFID-DKLRPGLQAQPVAVKNLD-LEGLQGHREWLTEVIFLGQ 137
+++ +++GEG +G V + + +K+R VA+K + E + L E+ L +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVR-------VAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL-GAAKGL 196
RH +++ + + Y+ + +E L++ + + L +GL
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQGYAA 255
++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T + T+ Y A
Sbjct: 143 KYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 256 PEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
PE ++ T D++S G +L E+LS R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 161 EYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS 220
E+ +G+LE + +R L +++ KG+ ++H K +I+RD K SNI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVD 171
Query: 221 DYTAKLSDFGLA----KDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVV 276
K+ DFGL DG TR GT Y +PE + + D+Y+ G++
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKR-------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 277 LLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALA 336
L ELL + + A + + +G S+ +K L
Sbjct: 225 LAELLH----------------------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLL 262
Query: 337 YQCLSHRPKQRPTMSTVVKTL 357
+ LS +P+ RP S +++TL
Sbjct: 263 QKLLSKKPEDRPNTSEILRTL 283
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 80 FSSSNFLGEGGFGAVH--KGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLG 136
F LG GGFG V K +DD A+K + L + RE + EV L
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDD--------CNYAIKRIRLPNRELAREKVMREVKALA 58
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL--ENQLFRRYSVSLPW------------ 182
+L HP +V+ E+ + P+ L + QL R+ ++ W
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK-DWMNGRCTIEERER 117
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL--AKDGPEGDD 240
S + I L A+ + FLH K +++RD K SNI D K+ DFGL A D E +
Sbjct: 118 SVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 241 THVS--------TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
T ++ T +GT+ Y +PE + + D++S G++L ELL
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQA-----QPVAVKNLDLEGLQGHREW 128
+V F+ LG+G FG V D K L A + V +++ D+E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVM--LADRKGTEELYAIKILKKDVVIQDDDVECT------ 66
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
+ E L L P + + C + RL V EY+ G L + + P +
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY- 125
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK----DGPEGDDTHV 243
A + GL FLH ++ +IYRD K N++LDS+ K++DFG+ K DG V
Sbjct: 126 -AAEISIGLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG-------V 175
Query: 244 STR-VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVD-KSRPQREQSLVE 300
+TR GT Y APE + D +++GV+L E+L+G+ D + + QS++E
Sbjct: 176 TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE---WLTE 131
+ + + LG+G FG V DK+ Q AVK + ++ + L E
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVI--LCKDKI----TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
V L QL HP++ KL + ++ + LV E G L +++ R S + R I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQ 134
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRV- 247
G+ + H + +++RD K N+LL+S D ++ DFGL+ TH
Sbjct: 135 VLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKK 184
Query: 248 ----MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+GT Y APE V+ G DV+S GV+L LLSG
Sbjct: 185 XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRP----GLQAQPVAVKNLDLEGLQGHREWL 129
KV ++F LG G +G V F+ K+ L A V K ++ +
Sbjct: 50 KVGIENFELLKVLGTGAYGKV---FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
TE L +R + + Y + E +L L+ +Y+ G L L +R + ++I
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQI 163
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
+G LA H + +IYRD K NILLDS+ L+DFGL+K+ D+T +
Sbjct: 164 YVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFC 221
Query: 249 GTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSG 283
GT Y AP+ V +GH ++ D +S GV++ ELL+G
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAV-DWWSLGVLMYELLTG 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 13 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 123
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 50 TTLSE---DLSISLAGSNLHVF---TLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKL 103
TTL + D++ S +GS L + T+A V +S +G+G FG V +G
Sbjct: 14 TTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQES------IGKGRFGEVWRG------ 61
Query: 104 RPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHLVKLIGYCCEEE----HRL 157
+ + VAVK + + R W E+ LRH +++ I ++
Sbjct: 62 --KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116
Query: 158 LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH-----DAEKPVI-YRDF 211
LV +Y GSL + L RY+V++ +K+AL A GLA LH KP I +RD
Sbjct: 117 LVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173
Query: 212 KASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQGYAAPEY----VMTGHLT 265
K+ NIL+ + T ++D GLA DT +GT+ Y APE + H
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233
Query: 266 SM--SDVYSFGVVLLEL 280
S +D+Y+ G+V E+
Sbjct: 234 SFKRADIYAMGLVFWEI 250
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK-SRPQREQSLVEWARPMLNDARKL 312
+ DV+S G+VL +L+G D+ S +E S + + LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI 233
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 50 TTLSE---DLSISLAGSNLHVF---TLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKL 103
TTL + D++ S +GS L + T+A V +S +G+G FG V +G
Sbjct: 1 TTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQES------IGKGRFGEVWRG------ 48
Query: 104 RPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHLVKLIGYCCEEE----HRL 157
+ + VAVK + + R W E+ LRH +++ I ++
Sbjct: 49 --KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 103
Query: 158 LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH-----DAEKPVI-YRDF 211
LV +Y GSL + L RY+V++ +K+AL A GLA LH KP I +RD
Sbjct: 104 LVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 160
Query: 212 KASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQGYAAPEY----VMTGHLT 265
K+ NIL+ + T ++D GLA DT +GT+ Y APE + H
Sbjct: 161 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 220
Query: 266 SM--SDVYSFGVVLLEL 280
S +D+Y+ G+V E+
Sbjct: 221 SFKRADIYAMGLVFWEI 237
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG VH+ ++DK + G Q AVK + LE + E++ L P +V
Sbjct: 82 LGRGSFGEVHR--MEDK-QTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 130
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G E + E + GSL QL + LP + A +GL +LH +
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLVKEQGC-LPEDRALYYLGQALEGLEYLHS--RR 186
Query: 206 VIYRDFKASNILLDSDYT-AKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++ D KA N+LL SD + A L DFG L DG G D + GT+ + APE V+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKDLLTGDYIPGTETHMAPEVVL 245
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ DV+S ++L +L+G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE-GLQGHREWLTEVIFLGQLRHPHLV 144
LGEG +G V + + VAVK +D++ + E+ L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 79
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 135
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
VI+RD K N+ L+ D K+ DFGLA E D T + GT Y APE +
Sbjct: 136 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKT-LCGTPNYIAPEVLSK 191
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG +G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 101
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 157
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
VI+RD K N+ L+ D K+ DFGLA K +G+ V + GT Y APE +
Sbjct: 158 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 212
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 213 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 83
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 139
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
VI+RD K N+ L+ D K+ DFGLA E D T + GT Y APE +
Sbjct: 140 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKT-LCGTPNYIAPEVLSK 195
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 103
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 159
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
VI+RD K N+ L+ D K+ DFGLA K +G+ V + GT Y APE +
Sbjct: 160 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 214
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 79
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 135
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
VI+RD K N+ L+ D K+ DFGLA E D T + GT Y APE +
Sbjct: 136 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKT-LCGTPNYIAPEVLSK 191
Query: 262 GHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT-EVIFLGQLRHPHL 143
FLG+GGF + I D + A + K+L L+ Q RE ++ E+ L H H+
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 77
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAFLHD 201
V G+ + + +V E R SL RR +++ P + +I LG +LH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR 133
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
VI+RD K N+ L+ D K+ DFGLA K +G+ V + GT Y APE +
Sbjct: 134 NR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 188
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKS 290
+ DV+S G ++ LL G+ + S
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
+ + LG G F V +DK L A K LEG +G E E+ L +++
Sbjct: 20 YDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKA-LEGKEGSME--NEIAVLHKIK 74
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP++V L H L+ + + G L +++ + + ++R+ + A + +L
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 200 HDAEKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
HD +++RD K N+L LD D +SDFGL+K D V + GT GY AP
Sbjct: 133 HDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAP 187
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSG 283
E + + D +S GV+ LL G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 76 TTQSFSSSNF---LGE-GGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTE 131
T+ + +F +GE G FG V+K +K L A K +D + + +++ E
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA--QNKETSVL----AAAKVIDTKSEEELEDYMVE 57
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALG 191
+ L HP++VKL+ E + ++ E+ G+++ + L S +
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQ 116
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR--VMG 249
L +LHD + +I+RD KA NIL D KL+DFG++ T + R +G
Sbjct: 117 TLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---TXIQRRDSFIG 171
Query: 250 TQGYAAPEYVMTGH-----LTSMSDVYSFGVVLLEL 280
T + APE VM +DV+S G+ L+E+
Sbjct: 172 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
+ + LG G F V +DK L A K LEG +G E E+ L +++
Sbjct: 20 YDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEA-LEGKEGSME--NEIAVLHKIK 74
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP++V L H L+ + + G L +++ + + ++R+ + A + +L
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 200 HDAEKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
HD +++RD K N+L LD D +SDFGL+K G V + GT GY AP
Sbjct: 133 HDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAP 187
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSG 283
E + + D +S GV+ LL G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
+ + LG G F V +DK L A K LEG +G E E+ L +++
Sbjct: 20 YDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEA-LEGKEGSME--NEIAVLHKIK 74
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP++V L H L+ + + G L +++ + + ++R+ + A + +L
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 200 HDAEKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
HD +++RD K N+L LD D +SDFGL+K G V + GT GY AP
Sbjct: 133 HDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAP 187
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSG 283
E + + D +S GV+ LL G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 125 HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV-SLPWS 183
H E E+ L L HP+++KL ++++ LV E+ G L Q+ R+ +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDD 240
MK L G+ +LH + +++RD K NILL++ K+ DFGL+ + D
Sbjct: 150 NIMKQILS---GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--D 202
Query: 241 THVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ R +GT Y APE V+ DV+S GV++ LL G
Sbjct: 203 YKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH---REWLTEV 132
+ + + + +GEG +G V K R + VA+K LE + + E+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMK------CRNKDTGRIVAIKKF-LESDDDKMVKKIAMREI 75
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
L QLRH +LV L+ C +++ LV+E++ L++ + L + K
Sbjct: 76 KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQI 133
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GP-EGDDTHVSTRVMG 249
G+ F H +I+RD K NIL+ KL DFG A+ P E D V+TR
Sbjct: 134 INGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR--- 188
Query: 250 TQGYAAPEYVMTGHLT--SMSDVYSFGVVLLELLSG 283
Y APE ++ G + DV++ G ++ E+ G
Sbjct: 189 --WYRAPE-LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V DKL +A + +K + L EV L QL HP+++K
Sbjct: 12 LGSGAYGEVL--LCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS-LPWSTRMKIALGAAKGLAFLHDAEK 204
L + ++ + LV E G L +++ R S + + MK L G +LH +
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH--KH 123
Query: 205 PVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
+++RD K N+LL+S D K+ DFGL+ G +GT Y APE V+
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLR 179
Query: 262 GHLTSMSDVYSFGVVLLELLSG 283
DV+S GV+L LL G
Sbjct: 180 KKYDEKCDVWSCGVILYILLCG 201
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
+ + LG G F V +DK L A K LEG +G E E+ L +++
Sbjct: 20 YDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEA-LEGKEGSME--NEIAVLHKIK 74
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP++V L H L+ + + G L +++ + + ++R+ + A + +L
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 200 HDAEKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
HD +++RD K N+L LD D +SDFGL+K D V + GT GY AP
Sbjct: 133 HDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAP 187
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSG 283
E + + D +S GV+ LL G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEV 132
L++ + + +G G FG V + K + A + K ++ W E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQ--LVRHKASQKVYAMKLLSKFEMIKRSDSAFFW-EER 126
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW----STRMKI 188
+ P +V+L ++++ +V EYMP G L N L Y V W + + +
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVL 185
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
AL A + +H RD K N+LLD KL+DFG E H T V
Sbjct: 186 ALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 249 GTQGYAAPEYVMT----GHLTSMSDVYSFGVVLLELLSG 283
GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG VH+ + DK + G Q AVK + LE + + E++ L P +V
Sbjct: 80 LGRGSFGEVHR--MKDK-QTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 128
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G E + E + GSL QL ++ LP + A +GL +LH +
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLHT--RR 184
Query: 206 VIYRDFKASNILLDSDYT-AKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++ D KA N+LL SD + A L DFG L DG G + GT+ + APE VM
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVM 243
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ D++S ++L +L+G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG---HREWLTEVIF 134
+ + +GEG +G V K D Q VA+K LE + L E+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRD------TGQIVAIKKF-LESEDDPVIKKIALREIRM 55
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
L QL+HP+LV L+ + LV+EY L RY +P I +
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTLQ 113
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGP-EGDDTHVSTRVMGTQ 251
+ F H I+RD K NIL+ KL DFG A+ GP + D V+TR
Sbjct: 114 AVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR----- 166
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSG 283
Y +PE ++ DV++ G V ELLSG
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G +G V DKL +A + +K + L EV L QL HP+++K
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS-LPWSTRMKIALGAAKGLAFLHDAEK 204
L + ++ + LV E G L +++ R S + + MK L G +LH +
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH--KH 140
Query: 205 PVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
+++RD K N+LL+S D K+ DFGL+ G +GT Y APE V+
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLR 196
Query: 262 GHLTSMSDVYSFGVVLLELLSG 283
DV+S GV+L LL G
Sbjct: 197 KKYDEKCDVWSCGVILYILLCG 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ--GHREWLTEVIFLGQLRHPHL 143
+G+G F V R L + VA+K +D L ++ EV + L HP++
Sbjct: 20 IGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ L+ EY G + + L RMK +K +
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--------GRMKEKEARSKFRQIVSAVQ 125
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G G+ YAAPE
Sbjct: 126 YCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPE 180
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSG 283
DV+S GV+L L+SG
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
+ L ++HP LV L + V +Y+ G L L R P + + +
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 150
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
A L +LH ++YRD K NILLDS L+DFGL K+ E + T ++ GT
Sbjct: 151 A--LGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y APE + D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ-LRHPHLV 144
LGEG G V + + VAVK +D++ E + + I + + L H ++V
Sbjct: 14 LGEGAAGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
K G+ E + L EY G L +++ + P + R L A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TSMS-DVYSFGVVLLELLSGRKSVDK 289
+ DV+S G+VL +L+G D+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGDDTHVSTRVMGTQG 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA+ P+ D T T + T+
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 253 YAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGR 284
Y APE ++ T D++S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ--GHREWLTEVIFLGQLRHPHL 143
+G+G F V R L + VA+K +D L ++ EV + L HP++
Sbjct: 23 IGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK------GLA 197
VKL E+ L+ EY G + + L RMK +K +
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--------GRMKEKEARSKFRQIVSAVQ 128
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
+ H +K +++RD KA N+LLD+D K++DFG + + G G YAAPE
Sbjct: 129 YCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPE 183
Query: 258 YVMTGHLTSMS-DVYSFGVVLLELLSG 283
DV+S GV+L L+SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 118/298 (39%), Gaps = 51/298 (17%)
Query: 80 FSSSNFL---GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE--GLQGHREWLTEVIF 134
F NFL E G + KG Q + VK L + + R++ E
Sbjct: 9 FKQLNFLTKLNENHSGELWKG--------RWQGNDIVVKVLKVRDWSTRKSRDFNEECPR 60
Query: 135 LGQLRHPHLVKLIGYC--CEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
L HP+++ ++G C H L+ +MP GSL N L + + S +K AL
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLS--DFGLAKDGPEGDDTHVSTRVMGT 250
A+G+AFLH E + + ++++D D TA++S D + P M
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYA 171
Query: 251 QGYAAPEYVMTGHLTS---MSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ APE + + +D++SF V+L EL++ RE
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-----------REVPFA-------- 212
Query: 308 DARKLGRIMDPRLEGQYSETG---ARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
D + M LEG + + L C++ P +RP +V LE ++D
Sbjct: 213 DLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HPH++ LI LV++ M +G L + L + V+L I + ++FL
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFL 216
Query: 200 HDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
H +++RD K NILLD + +LSDFG + G+ + GT GY APE +
Sbjct: 217 H--ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEIL 271
Query: 260 MTGHLTSMS------DVYSFGVVLLELLSG 283
+ D+++ GV+L LL+G
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLGQLRHPHLV 144
LG GGFG V + D + VA+K E +RE W E+ + +L HP++V
Sbjct: 23 LGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 145 KL------IGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRMKIALGAAKGLA 197
+ + LL EY G L L + L + + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 198 FLHDAEKPVIYRDFKASNILLD---SDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
+LH E +I+RD K NI+L K+ D G AK+ +G+ + T +GT Y
Sbjct: 137 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYL 191
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE + T D +SFG + E ++G
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G FG V +G + + VAVK + + R W E+ LRH ++
Sbjct: 12 IGKGRFGEVWRG--------KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENI 60
Query: 144 VKLIGYCCEEE----HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I ++ LV +Y GSL + L RY+V++ +K+AL A GLA L
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHL 117
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQ 251
H KP I +RD K+ NIL+ + T ++D GLA DT +GT+
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 252 GYAAPEY----VMTGHLTSM--SDVYSFGVVLLEL 280
Y APE + H S +D+Y+ G+V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-WLTEVIFLGQLRHPHLV 144
LG GGFG V + D + VA+K E +RE W E+ + +L HP++V
Sbjct: 22 LGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 145 KL------IGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRMKIALGAAKGLA 197
+ + LL EY G L L + L + + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 198 FLHDAEKPVIYRDFKASNILLD---SDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
+LH E +I+RD K NI+L K+ D G AK+ +G+ + T +GT Y
Sbjct: 136 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYL 190
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE + T D +SFG + E ++G
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G FG V +G + + VAVK + + R W E+ LRH ++
Sbjct: 11 IGKGRFGEVWRG--------KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENI 59
Query: 144 VKLIGYCCEEE----HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I ++ LV +Y GSL + L RY+V++ +K+AL A GLA L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHL 116
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQ 251
H KP I +RD K+ NIL+ + T ++D GLA DT +GT+
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 252 GYAAPEY----VMTGHLTSM--SDVYSFGVVLLEL 280
Y APE + H S +D+Y+ G+V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 86 LGEGGFGAV----HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
LG+G FG V KG D+ + + V +++ D+E + E L P
Sbjct: 349 LGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECT------MVEKRVLALPGKP 401
Query: 142 HLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
+ + C + RL V EY+ G L + + P + A A GL FL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQ 459
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
K +IYRD K N++LDS+ K++DFG+ K+ D + GT Y APE +
Sbjct: 460 S--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIA 515
Query: 261 TGHLTSMSDVYSFGVVLLELLSGR 284
D ++FGV+L E+L+G+
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH--REWLTEVIFLGQLRHPHL 143
+G+G F V R L + VAVK +D L ++ EV L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
VKL E+ LV EY G + + L + R K + + H +
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVA-HGRXKEKEARAKFR-QIVSAVQYCH--Q 131
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH 263
K +++RD KA N+LLD+D K++DFG + + G+ G YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKK 188
Query: 264 LTSMS-DVYSFGVVLLELLSGRKSVD 288
DV+S GV+L L+SG D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 34/270 (12%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 33 NFIKIGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 86
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 137
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L+ LH + VI+RD K+ +ILL D KLSDFG + ++GT + A
Sbjct: 138 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 193
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDARKLGR 314
PE + D++S G++++E++ G P + ++ + P L + K+
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS- 252
Query: 315 IMDPRLEGQYSETGARKAA--ALAYQCLSH 342
P L+G R A A A + L H
Sbjct: 253 ---PSLKGFLDRLLVRDPAQRATAAELLKH 279
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG VH+ ++DK + G Q AVK + LE + E++ L P +V
Sbjct: 101 LGRGSFGEVHR--MEDK-QTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 149
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G E + E + GSL QL + LP + A +GL +LH +
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSL-GQLVKEQGC-LPEDRALYYLGQALEGLEYLHS--RR 205
Query: 206 VIYRDFKASNILLDSDYT-AKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++ D KA N+LL SD + A L DFG L DG G + GT+ + APE V+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAPEVVL 264
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ DV+S ++L +L+G
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G FG V +G + + VAVK + + R W E+ LRH ++
Sbjct: 17 IGKGRFGEVWRG--------KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENI 65
Query: 144 VKLIGYCCEEE----HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I ++ LV +Y GSL + L RY+V++ +K+AL A GLA L
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHL 122
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQ 251
H KP I +RD K+ NIL+ + T ++D GLA DT +GT+
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 252 GYAAPEY----VMTGHLTSM--SDVYSFGVVLLEL 280
Y APE + H S +D+Y+ G+V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G FG V +G + + VAVK + + R W E+ LRH ++
Sbjct: 14 IGKGRFGEVWRG--------KWRGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENI 62
Query: 144 VKLIGYCCEEE----HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I ++ LV +Y GSL + L RY+V++ +K+AL A GLA L
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHL 119
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT--HVSTRVMGTQ 251
H KP I +RD K+ NIL+ + T ++D GLA DT +GT+
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 252 GYAAPEY----VMTGHLTSM--SDVYSFGVVLLEL 280
Y APE + H S +D+Y+ G+V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH+ + DK + G Q AVK + LE + + E++ L P +V
Sbjct: 66 VGRGSFGEVHR--MKDK-QTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 114
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G E + E + GSL QL ++ LP + A +GL +LH +
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLHT--RR 170
Query: 206 VIYRDFKASNILLDSDYT-AKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++ D KA N+LL SD + A L DFG L DG G + GT+ + APE VM
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVM 229
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ D++S ++L +L+G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 28 NFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 132
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDTHVSTRVMGTQ 251
L+ LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 133 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTP 184
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDAR 310
+ APE + D++S G++++E++ G P + ++ + P L +
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 244
Query: 311 KLGRIMDPRLEGQYSETGARKAA--ALAYQCLSH 342
K+ P L+G R A A A + L H
Sbjct: 245 KVS----PSLKGFLDRLLVRDPAQRATAAELLKH 274
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 34/270 (12%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 155 NFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 259
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L+ LH + VI+RD K+ +ILL D KLSDFG + ++GT + A
Sbjct: 260 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 315
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDARKLGR 314
PE + D++S G++++E++ G P + ++ + P L + K+
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS- 374
Query: 315 IMDPRLEGQYSETGARKAA--ALAYQCLSH 342
P L+G R A A A + L H
Sbjct: 375 ---PSLKGFLDRLLVRDPAQRATAAELLKH 401
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 34/270 (12%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 35 NFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 88
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 139
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L+ LH + VI+RD K+ +ILL D KLSDFG + ++GT + A
Sbjct: 140 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 195
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDARKLGR 314
PE + D++S G++++E++ G P + ++ + P L + K+
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS- 254
Query: 315 IMDPRLEGQYSETGARKAA--ALAYQCLSH 342
P L+G R A A A + L H
Sbjct: 255 ---PSLKGFLDRLLVRDPAQRATAAELLKH 281
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG VH+ + DK + G Q AVK + LE + + E++ L P +V
Sbjct: 82 VGRGSFGEVHR--MKDK-QTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 130
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L G E + E + GSL QL ++ LP + A +GL +LH +
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLHT--RR 186
Query: 206 VIYRDFKASNILLDSDYT-AKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPEYVM 260
+++ D KA N+LL SD + A L DFG L DG G + GT+ + APE VM
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVM 245
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ D++S ++L +L+G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 24 NFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 128
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDTHVSTRVMGTQ 251
L+ LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 129 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTP 180
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDAR 310
+ APE + D++S G++++E++ G P + ++ + P L +
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 240
Query: 311 KLGRIMDPRLEGQYSETGARKAA--ALAYQCLSH 342
K+ P L+G R A A A + L H
Sbjct: 241 KVS----PSLKGFLDRLLVRDPAQRATAAELLKH 270
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V + D +LR Q VAVK L + L R E+ L L+H ++
Sbjct: 36 VGSGAYGSVCSAY-DARLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ E+ + + + L N + S +L + +GL +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KSQALSDEHVQFLVYQLLRGLKY 146
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR Y APE
Sbjct: 147 IHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEI 199
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 43/279 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIFLGQLRHPHL 143
+GEG FG K + G Q +K +++ + + E EV L ++HP++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQ---YVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-------ENQLFRRYSVSLPWSTRMKIALGAAKGL 196
V+ E +V +Y G L + LF+ + L W ++ +AL
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQICLALK----- 139
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
H ++ +++RD K+ NI L D T +L DFG+A+ ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
E + SD+++ G VL EL + + + + A M N K+
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE-------------AGSMKNLVLKIISGS 241
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVK 355
P + YS +L Q P+ RP+++++++
Sbjct: 242 FPPVSLHYS----YDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 74 KVTTQSFSSSNFLGEGGFGAV----HKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
++ F+ LG+G FG V KG D+ + + V +++ D+E +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECT------M 68
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
E L P + + C + RL V EY+ G L + + P +
Sbjct: 69 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY-- 126
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A A GL FL K +IYRD K N++LDS+ K++DFG+ K+ D +
Sbjct: 127 AAEIAIGLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--DGVTTKXFC 182
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT Y APE + D ++FGV+L E+L+G+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 34/270 (12%)
Query: 84 NFL--GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHP 141
NF+ GEG G V + + VAVK +DL Q EV+ + +H
Sbjct: 78 NFIKIGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 131
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK------IALGAAKG 195
++V++ + +V E++ G+L + + TRM + L +
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQA 182
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
L+ LH + VI+RD K+ +ILL D KLSDFG + ++GT + A
Sbjct: 183 LSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 238
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV-EWARPMLNDARKLGR 314
PE + D++S G++++E++ G P + ++ + P L + K+
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV-- 296
Query: 315 IMDPRLEGQYSETGARKAA--ALAYQCLSH 342
P L+G R A A A + L H
Sbjct: 297 --SPSLKGFLDRLLVRDPAQRATAAELLKH 324
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR------KSVDK--------SRPQRE 295
+ Y APE + TS DV+S G VL ELL G+ VD+ P RE
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 296 Q------SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT 349
Q + E+A P + A ++ PR + A AL + L + P R T
Sbjct: 246 QIREMNPNYTEFAFPQIK-AHPWTKVFRPRTPPE--------AIALCSRLLEYTPTARLT 296
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
+ +L++ + + +G G FG V + K + A + K ++ W
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFW- 117
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW----STR 185
E + P +V+L ++ + +V EYMP G L N L Y V W +
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 176
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDT 241
+ +AL A + F+H RD K N+LLD KL+DFG + K+G DT
Sbjct: 177 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 242 HVSTRVMGTQGYAAPEYVMT----GHLTSMSDVYSFGVVLLELLSG 283
V GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 229 AV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 75 VTTQSFSSSNF-----LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKN-LDLEGLQGHREW 128
+ T+ F+ +F LG+G FG V+ +K + A V K+ ++ EG++ +
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVY--LAREKKSHFIVALKVLFKSQIEKEGVE--HQL 70
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
E+ L HP++++L Y + L+ EY PRG L +L + S + I
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQRTATI 128
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A L + H K VI+RD K N+LL K++DFG + P + + M
Sbjct: 129 MEELADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS-----LRRKTM 181
Query: 249 -GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
GT Y PE + D++ GV+ ELL G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
+ S + LG G FG VHK ++ GL+ +A K + G++ E E+ + QL
Sbjct: 90 TVSKTEILGGGRFGQVHKC---EETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
H +L++L + +LV EY+ G L +++ S +L + +G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRH 202
Query: 199 LHDAEKPVIYRDFKASNIL-LDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
+H + +++ D K NIL ++ D K+ DFGLA+ + V+ GT + AP
Sbjct: 203 MH--QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSG 283
E V ++ +D++S GV+ LLSG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
+ +L++ + + +G G FG V + K + A + K ++ W
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFW- 122
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW----STR 185
E + P +V+L ++ + +V EYMP G L N L Y V W +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDT 241
+ +AL A + F+H RD K N+LLD KL+DFG + K+G DT
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 242 HVSTRVMGTQGYAAPEYVMT----GHLTSMSDVYSFGVVLLELLSG 283
V GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 234 AV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLENQLFRRYS---VSLPWSTRMKIA 189
H ++V+L G +E + LV +Y+P + ++ R YS +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVM 248
+ LA++H + +RD K N+LLD D KL DFG AK G+ + +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXI 183
Query: 249 GTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR------KSVDK--------SRPQ 293
++ Y APE + TS DV+S G VL ELL G+ VD+ P
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 294 REQ------SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
REQ + E+A P + A ++ PR + A AL + L + P R
Sbjct: 244 REQIREMNPNYTEFAFPQIK-AHPWTKVFRPRTPPE--------AIALCSRLLEYTPTAR 294
Query: 348 PT 349
T
Sbjct: 295 LT 296
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL 129
+ +L++ + + +G G FG V + K + A + K ++ W
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFW- 122
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW----STR 185
E + P +V+L ++ + +V EYMP G L N L Y V W +
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDT 241
+ +AL A + F+H RD K N+LLD KL+DFG + K+G DT
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 242 HVSTRVMGTQGYAAPEYVMT----GHLTSMSDVYSFGVVLLELLSG 283
V GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 234 AV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWL 129
+ +T FS +G GGFG V+ R + A+K LD + + QG L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 236
Query: 130 TEVIFLGQLRH---PHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTR 185
E I L + P +V + Y +L + + M G L L ++ V R
Sbjct: 237 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMR 294
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
A GL +H+ + V+YRD K +NILLD ++SD GLA D + H S
Sbjct: 295 F-YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS- 349
Query: 246 RVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSG 283
+GT GY APE + G S +D +S G +L +LL G
Sbjct: 350 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWL 129
+ +T FS +G GGFG V+ R + A+K LD + + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 130 TEVIFLGQLRH---PHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTR 185
E I L + P +V + Y +L + + M G L L ++ V R
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMR 295
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
A GL +H+ + V+YRD K +NILLD ++SD GLA D + H S
Sbjct: 296 F-YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS- 350
Query: 246 RVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSG 283
+GT GY APE + G S +D +S G +L +LL G
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWL 129
+ +T FS +G GGFG V+ R + A+K LD + + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 130 TEVIFLGQLRH---PHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTR 185
E I L + P +V + Y +L + + M G L L ++ V R
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMR 295
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
A GL +H+ + V+YRD K +NILLD ++SD GLA D + H S
Sbjct: 296 F-YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS- 350
Query: 246 RVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSG 283
+GT GY APE + G S +D +S G +L +LL G
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V + D +LR Q VAVK L + L R E+ L L+H ++
Sbjct: 28 VGSGAYGSVCSAY-DARLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 144 VKLIGYCC------EEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
+ L+ + LV M G+ N + + ++S + L +GL
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL--LRGLK 137
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR Y APE
Sbjct: 138 YIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPE 190
Query: 258 YVMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL G+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL---QGHREWL 129
+ +T FS +G GGFG V+ R + A+K LD + + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 130 TEVIFLGQLRH---PHLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTR 185
E I L + P +V + Y +L + + M G L L ++ V R
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMR 295
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
A GL +H+ + V+YRD K +NILLD ++SD GLA D + H S
Sbjct: 296 F-YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS- 350
Query: 246 RVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSG 283
+GT GY APE + G S +D +S G +L +LL G
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 165 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 219
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 98
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 159 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 213
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 89
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 150 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 204
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 165 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 219
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 78
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 139 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 193
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 143 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 197
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V + D +LR Q VAVK L + L R E+ L L+H ++
Sbjct: 36 VGSGAYGSVCSAY-DARLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 144 VKLI-----GYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
+ L+ E+ + LV M G+ N + + ++S + L +GL
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL--LRGLK 145
Query: 198 FLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPE 257
++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR Y APE
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 258 YVMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 83
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 144 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 198
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 75
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 136 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 190
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 106
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 167 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 221
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 143 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 197
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG--HREWLTEVIFLGQLRHPHL 143
LG+G F V + L Q A K ++ + L H++ E L+HP++
Sbjct: 30 LGKGAFSVVRRCV------KVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
V+L EE H L+++ + G L E+ + R Y S ++ L A LH
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHCH 138
Query: 203 EKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
+ V++RD K N+LL S KL+DFGLA + EG+ GT GY +PE +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPGYLSPEVL 196
Query: 260 MTGHLTSMSDVYSFGVVLLELLSG 283
D+++ GV+L LL G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 71
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 132 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 186
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 108
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 169 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 223
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 74
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 135 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 189
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 149
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 210 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 264
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 37/250 (14%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE-GLQGH-REWLTEVIFL 135
Q + +GEG +G V K L+ G + VA+K + ++ G +G + EV L
Sbjct: 11 QQYECVAEIGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 136 GQLR---HPHLVKLIGYCC----EEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L HP++V+L C + E +L LV+E++ + L L + +P T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ +GL FLH V++RD K NIL+ S KL+DFGLA+ T V
Sbjct: 125 MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSV 179
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ T Y APE ++ + D++S G + E+ R + L + +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF------------RRKPLFRGS----S 223
Query: 308 DARKLGRIMD 317
D +LG+I+D
Sbjct: 224 DVDQLGKILD 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 139 RHPHLVKL------IGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L G +E + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG-LQAQPVAVKNLDLEGLQGHREWLTEV 132
K+ + + LG+G F + KG + G L V +K LD + HR + +E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD----KAHRNY-SES 58
Query: 133 IF-----LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRM 186
F + +L H HLV G C + +LV E++ GSL+ L + + +++ W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
++A A + FL E +I+ + A NILL + K + K G V +
Sbjct: 117 EVAKQLAAAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174
Query: 247 VMGTQ--GYAAPEYVMT-GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWAR 303
+ + + PE + +L +D +SFG L E+ SG +
Sbjct: 175 DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD-----------------K 217
Query: 304 PM--LNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
P+ L+ RKL D Q A + A L C+ + P RP+ +++ L L
Sbjct: 218 PLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE----GLQGHREWLTEVIFLGQLRHP 141
+GEG +G V+K + A+K + LE G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
++VKL ++ +LV+E++ + +L L T L G+A+ HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM- 260
+ V++RD K N+L++ + K++DFGLA+ G T + T Y AP+ +M
Sbjct: 119 --RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ ++ D++S G + E+++G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 37/250 (14%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE-GLQGH-REWLTEVIFL 135
Q + +GEG +G V K L+ G + VA+K + ++ G +G + EV L
Sbjct: 11 QQYECVAEIGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 136 GQLR---HPHLVKLIGYCC----EEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L HP++V+L C + E +L LV+E++ + L L + +P T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ +GL FLH V++RD K NIL+ S KL+DFGLA+ T V
Sbjct: 125 MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSV 179
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ T Y APE ++ + D++S G + E+ + +P S +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-------RRKPLFRGS---------S 223
Query: 308 DARKLGRIMD 317
D +LG+I+D
Sbjct: 224 DVDQLGKILD 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
S++ + +G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 139 RHPHLVKL--IGYCCEEEHRL----LVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
H ++V+L Y E+ + LV +Y+P + + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICS 185
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + TS DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NIL+ + K+ DFG+A+ G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE----GLQGHREWLTEVIFLGQLRHP 141
+GEG +G V+K + A+K + LE G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
++VKL ++ +LV+E++ + +L L T L G+A+ HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM- 260
+ V++RD K N+L++ + K++DFGLA+ G T + T Y AP+ +M
Sbjct: 119 --RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ ++ D++S G + E+++G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEG--LQGHREWLTEVIFLGQLRHPHL 143
LGE G G + + K+R +AVK + G + R + + L P++
Sbjct: 30 LGEMGSGTCGQVW---KMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAE 203
V+ G + E M G+ +L +R +P K+ + K L +L +
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 204 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH 263
VI+RD K SNILLD KL DFG++ G DD R G Y APE +
Sbjct: 145 G-VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDD-KAKDRSAGCAAYMAPERIDPPD 200
Query: 264 LTS-----MSDVYSFGVVLLELLSGR 284
T +DV+S G+ L+EL +G+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE----GLQGHREWLTEVIFLGQLRHP 141
+GEG +G V+K + A+K + LE G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 142 HLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHD 201
++VKL ++ +LV+E++ + +L L T L G+A+ HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM- 260
+ V++RD K N+L++ + K++DFGLA+ G T + T Y AP+ +M
Sbjct: 119 --RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 261 TGHLTSMSDVYSFGVVLLELLSG 283
+ ++ D++S G + E+++G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 37/250 (14%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE-GLQGH-REWLTEVIFL 135
Q + +GEG +G V K L+ G + VA+K + ++ G +G + EV L
Sbjct: 11 QQYECVAEIGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 136 GQLR---HPHLVKLIGYCC----EEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L HP++V+L C + E +L LV+E++ + L L + +P T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ +GL FLH V++RD K NIL+ S KL+DFGLA+ T V
Sbjct: 125 MMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSV 179
Query: 248 MGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLN 307
+ T Y APE ++ + D++S G + E+ + +P S +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-------RRKPLFRGS---------S 223
Query: 308 DARKLGRIMD 317
D +LG+I+D
Sbjct: 224 DVDQLGKILD 233
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS-LPWSTRMK 187
L EV L L HP+++KL + ++ + LV E G L +++ R + + + +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVS 244
L G+ +LH + +++RD K N+LL+S D K+ DFGL+ ++
Sbjct: 144 QVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKM 195
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+GT Y APE V+ DV+S GV+L LL+G
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 37 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 90
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLV-YEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAA 193
+ +L HP VKL +C +++ +L Y G L + R+ TR A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 147
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQG 252
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 204
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y +PE + SD+++ G ++ +L++G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EYMP G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D K++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EYMP G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D K++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 77 TQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLG 136
T+ + LG+G F V + K+ G + + + L + H++ E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCV---KVLAGQEYAAMIINTKKLSA-RDHQKLEREARICR 65
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKG 195
L+HP++V+L EE H L+++ + G L E+ + R Y S ++ L A
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-- 123
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
LH + V++R+ K N+LL S KL+DFGLA + EG+ GT G
Sbjct: 124 ---LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPG 178
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y +PE + D+++ GV+L LL G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 35 IGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 145
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 146 IHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 96/235 (40%), Gaps = 50/235 (21%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIF 134
F LG+G FG V K R L ++ A+K + H E L+EV+
Sbjct: 8 FEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVML 55
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLV---------------YEYMPRGSLENQLFRRYSVS 179
L L H ++V+ Y E R V EY G+L + L +++
Sbjct: 56 LASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLN 112
Query: 180 LPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGD 239
++ + L+++H + +I+RD K NI +D K+ DFGLAK+
Sbjct: 113 QQRDEYWRLFRQILEALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 240 D------------THVSTRVMGTQGYAAPEYV-MTGHLTSMSDVYSFGVVLLELL 281
D + T +GT Y A E + TGH D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 147
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 148 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 74 KVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPG-LQAQPVAVKNLDLEGLQGHREWLTEV 132
K+ + + LG+G F + KG + G L V +K LD + HR + +E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD----KAHRNY-SES 58
Query: 133 IF-----LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFR-RYSVSLPWSTRM 186
F + +L H HLV G C + +LV E++ GSL+ L + + +++ W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
++A A + FL E +I+ + A NILL + K + K G V +
Sbjct: 117 EVAKQLAWAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174
Query: 247 VMGTQ--GYAAPEYVMT-GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWAR 303
+ + + PE + +L +D +SFG L E+ SG +
Sbjct: 175 DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD-----------------K 217
Query: 304 PM--LNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPL 360
P+ L+ RKL D Q A + A L C+ + P RP+ +++ L L
Sbjct: 218 PLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 76 TTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL-DLEGLQGHREWLTEV-I 133
T + +G G +G+V+K +P Q +AVK + + ++ L ++ +
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMV----HKPS--GQIMAVKRIRSTVDEKEQKQLLMDLDV 73
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVS-----LPWSTRMKI 188
+ P++V+ G E + E M S F +Y S +P KI
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELM---STSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
L K L L + K +I+RD K SNILLD KL DFG++ + D+ TR
Sbjct: 131 TLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDA 186
Query: 249 GTQGYAAPEYVMTGH----LTSMSDVYSFGVVLLELLSGR 284
G + Y APE + SDV+S G+ L EL +GR
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 147
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 148 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 147
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 148 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 147
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 148 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 200
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 142
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 143 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 145
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 146 IHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NI++ + K+ DFG+A+ G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NI++ + K+ DFG+A+ G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NI++ + K+ DFG+A+ G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NI++ + K+ DFG+A+ G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 145
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 146 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 29 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 83 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 139
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 140 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 192
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 142
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 143 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 142
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 143 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 137
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 138 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 190
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE ++ V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 145
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 146 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 152
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 153 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 152
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 153 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 53/273 (19%)
Query: 52 LSEDLSISLAGSNLHVFTLAELKVTTQS---------FSSSNFLGEGGFGAVHKGF---- 98
L+ + I+L+ S VF +L V QS + S LG G G V F
Sbjct: 100 LNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKT 159
Query: 99 -------IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCC 151
I K + + + A L++E TE+ L +L HP ++K+ +
Sbjct: 160 CKKVAIRIISKRKFAIGSAREADPALNVE---------TEIEILKKLNHPCIIKIKNFFD 210
Query: 152 EEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPV 206
E++ +V E M G L N+ + + L + +M +A+ +LH E +
Sbjct: 211 AEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV------QYLH--ENGI 260
Query: 207 IYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM--- 260
I+RD K N+LL S D K++DFG +K E T + + GT Y APE ++
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 317
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
T D +S GV+L LSG + R Q
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 152
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 153 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + S L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGL + + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 26 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 136
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 137 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 189
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 53 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 163
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 164 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEI 216
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 28 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 138
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 139 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 191
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 137
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 138 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 190
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G +G V +G + VAVK + + + W TE+ LRH ++
Sbjct: 16 VGKGRYGEVWRGL--------WHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 144 VKLIGYCCEEEHR----LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I + L+ Y GSL + L R+ +L +++A+ AA GLA L
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAHL 121
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLA---KDGPEGDDTHVSTRVMGT 250
H KP I +RDFK+ N+L+ S+ ++D GLA G + D + RV GT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GT 180
Query: 251 QGYAAPEY----VMTGHLTS--MSDVYSFGVVLLEL 280
+ Y APE + T S +D+++FG+VL E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 53/273 (19%)
Query: 52 LSEDLSISLAGSNLHVFTLAELKVTTQS---------FSSSNFLGEGGFGAVHKGF---- 98
L+ + I+L+ S VF +L V QS + S LG G G V F
Sbjct: 114 LNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKT 173
Query: 99 -------IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCC 151
I K + + + A L++E TE+ L +L HP ++K+ +
Sbjct: 174 CKKVAIRIISKRKFAIGSAREADPALNVE---------TEIEILKKLNHPCIIKIKNFFD 224
Query: 152 EEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPV 206
E++ +V E M G L N+ + + L + +M +A+ +LH E +
Sbjct: 225 AEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV------QYLH--ENGI 274
Query: 207 IYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVM--- 260
I+RD K N+LL S D K++DFG +K E T + + GT Y APE ++
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVG 331
Query: 261 TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
T D +S GV+L LSG + R Q
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 364
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVS 244
+++ A + L F H + +I+RD K +NI++ + K+ DFG+A+ G+ +
Sbjct: 136 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 245 TRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V+GT Y +PE + + SDVYS G VL E+L+G
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 142
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 143 IHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 211
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 36 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 146
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y APE
Sbjct: 147 IHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 199
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-QGHREWL-TEVIFLGQLRHPHL 143
+G G +G K +R + + K LD + + ++ L +EV L +L+HP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 144 VKLIGYCCEEEHRLL--VYEYMPRGSLENQLF-----RRY---SVSLPWSTRMKIALGAA 193
V+ + + L V EY G L + + R+Y L T++ +AL
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+ D V++RD K +N+ LD KL DFGLA+ DT + +GT Y
Sbjct: 128 HRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYY 182
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+PE + SD++S G +L EL +
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 217
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 53/229 (23%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL------DLEGLQGHREWLTE 131
+++ S +G G +G+V ID + + VA+K L ++ + +RE
Sbjct: 24 KTYVSPTHVGSGAYGSVCSA-IDKR-----SGEKVAIKKLSRPFQSEIFAKRAYRE---- 73
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW-STRMKIAL 190
++ L ++H +++ L+ + P SL N F + + +P+ T ++ +
Sbjct: 74 LLLLKHMQHENVIGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIM 119
Query: 191 GAA--------------KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 236
G KGL ++H A V++RD K N+ ++ D K+ DFGLA+
Sbjct: 120 GLKFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177
Query: 237 EGDDTHVSTRVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+V TR Y APE +++ H D++S G ++ E+L+G+
Sbjct: 178 AEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE ++ V GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 197
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-QGHREWL-TEVIFLGQLRHPHL 143
+G G +G K +R + + K LD + + ++ L +EV L +L+HP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 144 VKLIGYCCEEEHRLL--VYEYMPRGSLENQLF-----RRY---SVSLPWSTRMKIALGAA 193
V+ + + L V EY G L + + R+Y L T++ +AL
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+ D V++RD K +N+ LD KL DFGLA+ DT + +GT Y
Sbjct: 128 HRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYY 182
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+PE + SD++S G +L EL +
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 10 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 121
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 122 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 178
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHR-EWLTEVIFLG 136
+++ + LGEG + V+KG + L VA+K + LE +G + EV L
Sbjct: 2 ETYIKLDKLGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLK 55
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLE-----NQLFRRYSVSLPWSTRMKIALG 191
L+H ++V L E+ LV+EY+ + + + ++V L
Sbjct: 56 DLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-------FLFQ 108
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
+GLA+ H + V++RD K N+L++ KL+DFGLA+ T+ + V T
Sbjct: 109 LLRGLAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TL 164
Query: 252 GYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
Y P+ ++ + ++ D++ G + E+ +GR
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ DFGLA+ DD T + T+ Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE--MTGXVATRWYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE ++ V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 201
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 53/229 (23%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL------DLEGLQGHREWLTE 131
+++ S +G G +G+V ID + + VA+K L ++ + +RE
Sbjct: 42 KTYVSPTHVGSGAYGSVCSA-IDKR-----SGEKVAIKKLSRPFQSEIFAKRAYRE---- 91
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPW-STRMKIAL 190
++ L ++H +++ L+ + P SL N F + + +P+ T ++ +
Sbjct: 92 LLLLKHMQHENVIGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIM 137
Query: 191 GAA--------------KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 236
G KGL ++H A V++RD K N+ ++ D K+ DFGLA+
Sbjct: 138 GMEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHA- 194
Query: 237 EGDDTHVSTRVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
D ++ V+ T+ Y APE +++ H D++S G ++ E+L+G+
Sbjct: 195 ---DAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 7 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 118
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 175
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 9 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 120
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 121 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 177
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 8 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 119
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 176
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT---- 130
+ T + +G G +G V+K R VA+K++ + G L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 131 -EVIFLGQLR---HPHLVKLIGYCC-----EEEHRLLVYEYMPRGSLENQLFRRYSVSLP 181
EV L +L HP++V+L+ C E LV+E++ + L L + LP
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 118
Query: 182 WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDT 241
T + +GL FLH +++RD K NIL+ S T KL+DFGLA+
Sbjct: 119 AETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 173
Query: 242 HVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
T V+ T Y APE ++ + D++S G + E+
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQY 198
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVI-----F 134
+ +G+G F V + + Q AVK +D+ TE +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRE------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-----MKIA 189
L+HPH+V+L+ + +V+E+M L ++ +R +S M+
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
L A L + HD +I+RD K N+LL S + KL DFG+A G+ V+
Sbjct: 140 LEA---LRYCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGG 192
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+GT + APE V DV+ GV+L LLSG
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 14 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 67
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 125
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 182
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
AKG+ FL A + I+RD A NILL K+ DFGLA+D + D
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + T SDV+SFGV+L E+ S
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D K++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 197
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 201
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
+ L NL+ +A T + LG+G F V + K P Q A K +
Sbjct: 11 VDLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCV---KKTP---TQEYAAKII 64
Query: 118 DLEGLQG--HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFR 174
+ + L H++ E L+HP++V+L EE LV++ + G L E+ + R
Sbjct: 65 NTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR 124
Query: 175 RYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY---TAKLSDFGL 231
Y S + L + H + +++RD K N+LL S KL+DFGL
Sbjct: 125 EYYSEADASHCIHQILESVN-----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL 179
Query: 232 AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
A + +G+ GT GY +PE + D+++ GV+L LL G
Sbjct: 180 AIE-VQGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LTEVIFLG 136
F LG G FG V + + G A+K LD + + +E L E L
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGL 196
+ P LVKL + + +V EY P G + + L R S P R A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-YAAQIVLTF 154
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR---VMGTQGY 253
+LH + +IYRD K N+++D K++DFGLAK V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE +++ D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 46/237 (19%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL--DLEGLQGHREWLTEVIFLGQ 137
+ + +G G +G V + + DKL + + VA+K + E L + L E+ L +
Sbjct: 55 YEIRHLIGTGSYGHVCEAY--DKL----EKRVVAIKKILRVFEDLIDCKRILREIAILNR 108
Query: 138 LRHPHLVKLIGYC----CEEEHRLLVYEYMPRGSLENQLFRR--YSVSLPWSTRMKIALG 191
L H H+VK++ E+ L V + + +LFR Y L T + L
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFK-KLFRTPVYLTELHIKTLLYNLLV 167
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEG----------- 238
G+ ++H A +++RD K +N L++ D + K+ DFGLA+ D PE
Sbjct: 168 ---GVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 239 DDTHVST---------RVMG---TQGYAAPEYV-MTGHLTSMSDVYSFGVVLLELLS 282
DD ++ T ++ G T+ Y APE + + + T DV+S G + ELL+
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ D+GLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQL 138
F LG G F V ++K L AVK + + L+G + E+ L ++
Sbjct: 24 FEFKETLGTGAFSEV--VLAEEKATGKL----FAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 139 RHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRR-YSVSLPWSTRMKIALGAAKGLA 197
+H ++V L H LV + + G L +++ + + ST ++ L A +
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VY 134
Query: 198 FLHDAEKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
+LH +++RD K N+L D + +SDFGL+K +GD V + GT GY
Sbjct: 135 YLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYV 189
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE + + D +S GV+ LL G
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLT 130
+ T + +G G +G V+K R VA+K++ + EGL +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPIST--VR 52
Query: 131 EVIFLGQLR---HPHLVKLIGYCC-----EEEHRLLVYEYMPRGSLENQLFRRYSVSLPW 182
EV L +L HP++V+L+ C E LV+E++ + L L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
T + +GL FLH +++RD K NIL+ S T KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
V+ T Y APE ++ + D++S G + E+
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 35 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 88
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 146
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 203
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 113 AVKNLDLEG--------LQGHREW-LTEVIFLGQLR-HPHLVKLIGYCCEEEHRLLVYEY 162
AVK +D+ G +Q RE L EV L ++ HP++++L LV++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 163 MPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
M +G L + L + V+L KI + + LH +++RD K NILLD D
Sbjct: 106 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM 161
Query: 223 TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH------LTSMSDVYSFGVV 276
KL+DFG + G+ V GT Y APE + D++S GV+
Sbjct: 162 NIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 277 LLELLSG 283
+ LL+G
Sbjct: 219 MYTLLAG 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT-EVIF 134
+ F LGEG F V R ++ A+K L+ + + ++T E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAK 194
+ +L HP VKL ++E Y G L + R+ TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGDDTHVSTRVMGTQGY 253
L +LH K +I+RD K NILL+ D +++DFG AK PE + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+PE + SD+++ G ++ +L++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 113 AVKNLDLEG--------LQGHREW-LTEVIFLGQLR-HPHLVKLIGYCCEEEHRLLVYEY 162
AVK +D+ G +Q RE L EV L ++ HP++++L LV++
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 163 MPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
M +G L + L + V+L KI + + LH +++RD K NILLD D
Sbjct: 93 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM 148
Query: 223 TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH------LTSMSDVYSFGVV 276
KL+DFG + G+ V GT Y APE + D++S GV+
Sbjct: 149 NIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 205
Query: 277 LLELLSG 283
+ LL+G
Sbjct: 206 MYTLLAG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 113 AVKNLDLEG--------LQGHREW-LTEVIFLGQLR-HPHLVKLIGYCCEEEHRLLVYEY 162
AVK +D+ G +Q RE L EV L ++ HP++++L LV++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 163 MPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY 222
M +G L + L + V+L KI + + LH +++RD K NILLD D
Sbjct: 106 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM 161
Query: 223 TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH------LTSMSDVYSFGVV 276
KL+DFG + G+ V GT Y APE + D++S GV+
Sbjct: 162 NIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 277 LLELLSG 283
+ LL+G
Sbjct: 219 MYTLLAG 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLT 130
+ T + +G G +G V+K R VA+K++ + EGL +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPIST--VR 52
Query: 131 EVIFLGQLR---HPHLVKLIGYCC-----EEEHRLLVYEYMPRGSLENQLFRRYSVSLPW 182
EV L +L HP++V+L+ C E LV+E++ + L L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
T + +GL FLH +++RD K NIL+ S T KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
V+ T Y APE ++ + D++S G + E+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 121/306 (39%), Gaps = 43/306 (14%)
Query: 64 NLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQ 123
+L L+ L+ F +G G +G V+KG R Q A+K +D+ G +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG------RHVKTGQLAAIKVMDVTGDE 63
Query: 124 GHREWLTEVIFLGQL-RHPHLVKLIGYCCE------EEHRLLVYEYMPRGSLENQLFRRY 176
E E+ L + H ++ G + ++ LV E+ GS+ + +
Sbjct: 64 -EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 177 SVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 236
+L I +GL+ LH + VI+RD K N+LL + KL DFG++
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL- 179
Query: 237 EGDDTHVSTR--VMGTQGYAAPEYVMTGH-----LTSMSDVYSFGVVLLELLSGRKSVDK 289
D V R +GT + APE + SD++S G+ +E+ G +
Sbjct: 180 ---DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
Query: 290 SRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT 349
P R L+ R PRL+ S+ ++K + CL QRP
Sbjct: 237 MHPMRALFLIP-------------RNPAPRLK---SKKWSKKFQSFIESCLVKNHSQRPA 280
Query: 350 MSTVVK 355
++K
Sbjct: 281 TEQLMK 286
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL-QGHREWL-TEVIFLGQLRHPHL 143
+G G +G K +R + + K LD + + ++ L +EV L +L+HP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 144 VKLIGYCCEEEHRLL--VYEYMPRGSLENQLF-----RRY---SVSLPWSTRMKIALGAA 193
V+ + + L V EY G L + + R+Y L T++ +AL
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+ D V++RD K +N+ LD KL DFGLA+ +D + +GT Y
Sbjct: 128 HRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYY 182
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+PE + SD++S G +L EL +
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G F V + + A+ + K L Q E +L+HP++V+
Sbjct: 37 LGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVR 92
Query: 146 LIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L EE LV++ + G L E+ + R + S ++ L + +A+ H
Sbjct: 93 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCH--SN 147
Query: 205 PVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
+++R+ K N+LL S KL+DFGLA E +D+ GT GY +PE +
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKK 204
Query: 262 GHLTSMSDVYSFGVVLLELLSG 283
+ D+++ GV+L LL G
Sbjct: 205 DPYSKPVDIWACGVILYILLVG 226
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 167
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 217
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLT 130
+ T + +G G +G V+K R VA+K++ + EGL +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPIST--VR 52
Query: 131 EVIFLGQLR---HPHLVKLIGYCC-----EEEHRLLVYEYMPRGSLENQLFRRYSVSLPW 182
EV L +L HP++V+L+ C E LV+E++ + L L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 183 STRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTH 242
T + +GL FLH +++RD K NIL+ S T KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 243 VSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELL 281
V+ T Y APE ++ + D++S G + E+
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 128/309 (41%), Gaps = 51/309 (16%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE--GLQGHRE 127
L E + + +G+G FG V+ G + VA++ +D+E +
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---------VAIRLIDIERDNEDQLKA 75
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
+ EV+ Q RH ++V +G C H L + + +G + R + L + +
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ 134
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGL------AKDGPEGDDT 241
IA KG+ +LH K ++++D K+ N+ D+ ++DFGL + G D
Sbjct: 135 IAQEIVKGMGYLH--AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKL 191
Query: 242 HVSTRVMGTQGYAAPEYVMTGH---------LTSMSDVYSFGVVLLELLSGRKSVDKSRP 292
+ G + APE + + SDV++ G + E L R+ K++P
Sbjct: 192 RIQN---GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQP 247
Query: 293 QREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETG-ARKAAALAYQCLSHRPKQRPTMS 351
+ W ++G M P L S+ G ++ + + C + ++RPT +
Sbjct: 248 AEA---IIW---------QMGTGMKPNL----SQIGMGKEISDILLFCWAFEQEERPTFT 291
Query: 352 TVVKTLEPL 360
++ LE L
Sbjct: 292 KLMDMLEKL 300
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 139
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 189
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R S P R
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF-Y 132
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 133 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 182
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQ 251
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T+
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 252 GYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRK 285
Y APE +++ H T D++S G + E+L+ R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 50/235 (21%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIF 134
F LG+G FG V K R L ++ A+K + H E L+EV+
Sbjct: 8 FEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVML 55
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLV---------------YEYMPRGSLENQLFRRYSVS 179
L L H ++V+ Y E R V EY +L + L +++
Sbjct: 56 LASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLN 112
Query: 180 LPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGD 239
++ + L+++H + +I+RD K NI +D K+ DFGLAK+
Sbjct: 113 QQRDEYWRLFRQILEALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 240 D------------THVSTRVMGTQGYAAPEYV-MTGHLTSMSDVYSFGVVLLELL 281
D + T +GT Y A E + TGH D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREW---LTEVIFLG 136
F LG G FG V + + G A+K LD + + +E L E L
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGL 196
+ P LVKL + + +V EY P G + + L R S P R A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-YAAQIVLTF 154
Query: 197 AFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR---VMGTQGY 253
+LH + +IYRD K N+++D +++DFGLAK V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 254 AAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE +++ D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLG 136
++ + +G G +G V+ + + + VA+K ++ E L + L E+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKN------ANKNVAIKKVNRMFEDLIDCKRILREITILN 82
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYE--YMPRGSLENQLFRRYSVSLPWSTR--MKIALGA 192
+L+ ++++L E+ LL ++ Y+ ++ L + + + + + I
Sbjct: 83 RLKSDYIIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS-------- 244
G F+H E +I+RD K +N LL+ D + K+ DFGLA+ D H+
Sbjct: 141 LLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 245 ---------------TRVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGRKS 286
T + T+ Y APE ++ + T+ D++S G + ELL+ KS
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 77 TQSFSSSNFLGEGGFGAV----HKGFIDDKLRPGLQAQPVAVKNLD-----LEGLQGHRE 127
+ F + LGEG +G V HK + VA+K ++ L L+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKP----------TGEIVAIKKIEPFDKPLFALRT--- 56
Query: 128 WLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK 187
L E+ L +H +++ + + Y+ + ++ L R S + ++
Sbjct: 57 -LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 188 IAL-GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEGDDTHVS 244
+ + + LH + VI+RD K SN+L++S+ K+ DFGLA+ D D++ +
Sbjct: 116 YFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 245 ------TRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQS 297
T + T+ Y APE ++T S + DV+S G +L EL R+ + R R Q
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQL 232
Query: 298 LV 299
L+
Sbjct: 233 LL 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 77 TQSFSSSNFLGEGGFGAV----HKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTE 131
+ F + LGEG +G V HK + VA+K ++ + L E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKP----------TGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL- 190
+ L +H +++ + + Y+ + ++ L R S + ++ +
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY 119
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEGDDTHVS---- 244
+ + LH + VI+RD K SN+L++S+ K+ DFGLA+ D D++ +
Sbjct: 120 QTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 245 --TRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
T + T+ Y APE ++T S + DV+S G +L EL R+ + R R Q L+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGDDTHVSTRVMGTQ 251
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T+
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 252 GYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRK 285
Y APE +++ H T D++S G + E+L+ R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 44/302 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G +G V +G Q + VAVK + + + W TE+ LRH ++
Sbjct: 45 VGKGRYGEVWRG--------SWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENI 93
Query: 144 VKLIGYCCEEEHR----LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I H L+ Y GSL + L +L + ++I L A GLA L
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHL 150
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLA---KDGPEGDDTHVSTRVMGT 250
H KP I +RD K+ NIL+ + ++D GLA D + RV GT
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 209
Query: 251 QGYAAPEY----VMTGHLTSMS--DVYSFGVVLLEL---LSGRKSVDKSRPQREQSLVEW 301
+ Y APE + S D+++FG+VL E+ + V+ +P +
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN- 268
Query: 302 ARPMLNDARKLGRI--MDPRLEGQY-SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
P D RK+ + P + ++ S+ A L +C P R T + KTL
Sbjct: 269 -DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 327
Query: 359 PL 360
+
Sbjct: 328 KI 329
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 44/302 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G +G V +G Q + VAVK + + + W TE+ LRH ++
Sbjct: 16 VGKGRYGEVWRG--------SWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 144 VKLIGYCCEEEHR----LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I H L+ Y GSL + L +L + ++I L A GLA L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLA---KDGPEGDDTHVSTRVMGT 250
H KP I +RD K+ NIL+ + ++D GLA D + RV GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 180
Query: 251 QGYAAPEY----VMTGHLTSMS--DVYSFGVVLLEL---LSGRKSVDKSRPQREQSLVEW 301
+ Y APE + S D+++FG+VL E+ + V+ +P +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN- 239
Query: 302 ARPMLNDARKLGRI--MDPRLEGQY-SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
P D RK+ + P + ++ S+ A L +C P R T + KTL
Sbjct: 240 -DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 359 PL 360
+
Sbjct: 299 KI 300
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ FGLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ--AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LG+G F V + GL+ A+ + K L Q E +L+HP++
Sbjct: 14 LGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNI 67
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
V+L EE LV++ + G L E+ + R + S ++ L + +A+ H
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCH-- 122
Query: 203 EKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
+++R+ K N+LL S KL+DFGLA E +D+ GT GY +PE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVL 179
Query: 260 MTGHLTSMSDVYSFGVVLLELLSG 283
+ D+++ GV+L LL G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
GL LH ++ +IYRD K N+LLD D ++SD GLA + G + GT G+
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 44/302 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL--TEVIFLGQLRHPHL 143
+G+G +G V +G Q + VAVK + + + W TE+ LRH ++
Sbjct: 16 VGKGRYGEVWRG--------SWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 144 VKLIGYCCEEEHR----LLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
+ I H L+ Y GSL + L +L + ++I L A GLA L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 200 H-----DAEKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGD---DTHVSTRVMGT 250
H KP I +RD K+ NIL+ + ++D GLA + D + RV GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 180
Query: 251 QGYAAPEY----VMTGHLTSMS--DVYSFGVVLLEL---LSGRKSVDKSRPQREQSLVEW 301
+ Y APE + S D+++FG+VL E+ + V+ +P +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN- 239
Query: 302 ARPMLNDARKLGRI--MDPRLEGQY-SETGARKAAALAYQCLSHRPKQRPTMSTVVKTLE 358
P D RK+ + P + ++ S+ A L +C P R T + KTL
Sbjct: 240 -DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 359 PL 360
+
Sbjct: 299 KI 300
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
GL LH ++ +IYRD K N+LLD D ++SD GLA + G + GT G+
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ--AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHL 143
LG+G F V + GL+ A+ + K L Q E +L+HP++
Sbjct: 13 LGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNI 66
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
V+L EE LV++ + G L E+ + R + S ++ L + +A+ H
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCH-- 121
Query: 203 EKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
+++R+ K N+LL S KL+DFGLA E +D+ GT GY +PE +
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVL 178
Query: 260 MTGHLTSMSDVYSFGVVLLELLSG 283
+ D+++ GV+L LL G
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVG 202
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
GL LH ++ +IYRD K N+LLD D ++SD GLA + G + GT G+
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
GL LH ++ +IYRD K N+LLD D ++SD GLA + G + GT G+
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSGR 284
APE ++ D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG+G F V + + A+ + K L Q E +L+HP++V+
Sbjct: 14 LGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVR 69
Query: 146 LIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEK 204
L EE LV++ + G L E+ + R + S ++ L + +A+ H
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCH--SN 124
Query: 205 PVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMT 261
+++R+ K N+LL S KL+DFGLA E +D+ GT GY +PE +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 262 GHLTSMSDVYSFGVVLLELLSG 283
+ D+++ GV+L LL G
Sbjct: 182 DPYSKPVDIWACGVILYILLVG 203
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
+GL ++H A+ +I+RD K SN+ ++ D K+ DF LA+ + +V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 254 AAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
APE ++ H D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH---- 125
+AEL ++ F+ G +GAV G +D + PVA+K + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAG-VDS------EGIPVAIKRVFNTVSDGRTVNI 66
Query: 126 -------REWLTEVIFLGQLRHPHLVKLIGYCCEEE----HRLLVYEYMPRGSLENQLFR 174
+ L E+ L HP+++ L E H+L + + R L +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 175 RYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK- 233
+ V P + GL LH+A V++RD NILL + + DF LA+
Sbjct: 127 QRIVISPQHIQY-FMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSV 287
D + + TH T + Y APE VM T + D++S G V+ E+ + RK++
Sbjct: 184 DTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 53/232 (22%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH---REWLTEVIFLGQLR-HP 141
LG+G +G V K ID + + VAVK + + Q + E++ L +L H
Sbjct: 17 LGKGAYGIVWKS-IDRR-----TGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 142 HLVKLIGYCCEEEHR--LLVYEYMP-------RGSLENQLFRRYSVSLPWSTRMKIALGA 192
++V L+ + R LV++YM R ++ + ++Y +
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-----------VVYQL 118
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK-----------------DG 235
K + +LH +++RD K SNILL+++ K++DFGL++ +
Sbjct: 119 IKVIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 236 PEG--DDTHVSTRVMGTQGYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSGR 284
E DD + T + T+ Y APE ++ + T D++S G +L E+L G+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGH---- 125
+AEL ++ F+ G +GAV G +D + PVA+K + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAG-VDS------EGIPVAIKRVFNTVSDGRTVNI 66
Query: 126 -------REWLTEVIFLGQLRHPHLVKLIGYCCEEE----HRLLVYEYMPRGSLENQLFR 174
+ L E+ L HP+++ L E H+L + + R L +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 175 RYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK- 233
+ V P + GL LH+A V++RD NILL + + DF LA+
Sbjct: 127 QRIVISPQHIQY-FMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 234 DGPEGDDTHVSTRVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSV 287
D + + TH T + Y APE VM T + D++S G V+ E+ + RK++
Sbjct: 184 DTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWST 184
TE+ L +L HP ++K+ + E++ +V E M G L N+ + + L +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 127
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDT 241
+M +A+ +LH E +I+RD K N+LL S D K++DFG +K E T
Sbjct: 128 QMLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 176
Query: 242 HVSTRVMGTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
+ + GT Y APE ++ T D +S GV+L LSG + R Q
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 231
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQ 251
A+G+ FL + + I+RD A NILL + K+ DFGLA+D + D
Sbjct: 208 VARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 252 GYAAPEYVMTGHLTSMSDVYSFGVVLLELLS 282
+ APE + ++ SDV+S+GV+L E+ S
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
P LVKL + + +V EY P G + + L R S P R A +LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HARF-YAAQIVLTFEYLH 159
Query: 201 DAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR---VMGTQGYAAPE 257
+ +IYRD K N+L+D K++DFG AK V R + GT Y APE
Sbjct: 160 SLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 209
Query: 258 YVMTGHLTSMSDVYSFGVVLLELLSG 283
+++ D ++ GV++ E+ +G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWST 184
TE+ L +L HP ++K+ + E++ +V E M G L N+ + + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDT 241
+M +A+ +LH E +I+RD K N+LL S D K++DFG +K E T
Sbjct: 122 QMLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 242 HVSTRVMGTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
+ + GT Y APE ++ T D +S GV+L LSG + R Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWST 184
TE+ L +L HP ++K+ + E++ +V E M G L N+ + + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDT 241
+M +A+ +LH E +I+RD K N+LL S D K++DFG +K E T
Sbjct: 122 QMLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 242 HVSTRVMGTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
+ + GT Y APE ++ T D +S GV+L LSG + R Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 126 REWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR 185
R E+ + L HP LV L +EE +V + + G L L + +V T
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETV 117
Query: 186 MKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVST 245
L +L + +I+RD K NILLD ++DF +A P +T ++T
Sbjct: 118 KLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT 173
Query: 246 RVMGTQGYAAPEYVMTGHLTSMS---DVYSFGVVLLELLSGRK 285
+ GT+ Y APE + S D +S GV ELL GR+
Sbjct: 174 -MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWST 184
TE+ L +L HP ++K+ + E++ +V E M G L N+ + + L +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 120
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDT 241
+M +A+ +LH E +I+RD K N+LL S D K++DFG +K E T
Sbjct: 121 QMLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 169
Query: 242 HVSTRVMGTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
+ + GT Y APE ++ T D +S GV+L LSG + R Q
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP++VKL ++ H LV E + G L ++ ++ S ++ + L +A ++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA--VSHM 122
Query: 200 HDAEKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
HD V++RD K N+L + + K+ DFG A+ P D+ + T T YAAP
Sbjct: 123 HDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAP 178
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSGR---KSVDKSRPQREQSLVEWARPMLNDARKLG 313
E + D++S GV+L +LSG+ +S D+S S VE + + K G
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC--TSAVEIMKKI-----KKG 231
Query: 314 RIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMS 351
D EG+ + +++A L L+ P +R MS
Sbjct: 232 ---DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMS 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-----ENQLFRRYSVSLPWST 184
TE+ L +L HP ++K+ + E++ +V E M G L N+ + + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDT 241
+M +A+ +LH E +I+RD K N+LL S D K++DFG +K E T
Sbjct: 122 QMLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 242 HVSTRVMGTQGYAAPEYVM---TGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
+ + GT Y APE ++ T D +S GV+L LSG + R Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY P G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPHL 143
+G G +G+V F + GL+ VAVK L + + + E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLI-----GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAF 198
+ L+ EE + + + ++ L N + L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKY 140
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEY 258
+H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 259 VMTG-HLTSMSDVYSFGVVLLELLSGR 284
++ H D++S G ++ ELL+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 86 LGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
LG+G +G V+ G + +++R +A+K + + + E+ L+H ++V
Sbjct: 30 LGKGTYGIVYAGRDLSNQVR-------IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRY------SVSLPWSTRMKIALGAAKGLAF 198
+ +G E + E +P GSL L ++ ++ + T+ + +GL +
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKY 137
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
LHD + +++RD K N+L+++ Y+ K+SDFG +K G + T GT Y AP
Sbjct: 138 LHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKR-LAGINPCTET-FTGTLQYMAP 192
Query: 257 EYVMTG--HLTSMSDVYSFGVVLLELLSGR 284
E + G +D++S G ++E+ +G+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G F V+KG +D + + + + L Q +E E L L+HP++V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 146 LI--------GYCCEEEHRLLVYEYMPRGSLENQLFR----RYSVSLPWSTRMKIALGAA 193
G C +LV E G+L+ L R + V W ++
Sbjct: 90 FYDSWESTVKGKKC----IVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------L 139
Query: 194 KGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
KGL FLH P+I+RD K NI + + K+ D GLA + V+GT
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPE 195
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLE 279
+ APE + S+ DVY+FG LE
Sbjct: 196 FXAPEXYEEKYDESV-DVYAFGXCXLE 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+P G + + L R P R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF-Y 139
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 189
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY P G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P L KL + + +V EY P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P L KL + + +V EY P G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 28/238 (11%)
Query: 77 TQSFSSSNFLGEGGFGAV----HKGFIDDKLRPGLQAQPVAVKNLD-LEGLQGHREWLTE 131
+ F + LGEG +G V HK + VA+K ++ + L E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKP----------TGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 132 VIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL- 190
+ L +H +++ + + Y+ + ++ L R S + ++ +
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY 119
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEGDDTHVS---- 244
+ + LH + VI+RD K SN+L++S+ K+ DFGLA+ D D++ +
Sbjct: 120 QTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 245 --TRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
+ T+ Y APE ++T S + DV+S G +L EL R+ + R R Q L+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWL-TEVIFLGQLRHPHLV 144
LG G FG VH + ++ GL+ +K ++ + Q E + E+ L L HP+++
Sbjct: 30 LGSGAFGDVH---LVEERSSGLER---VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLF----RRYSVSLPWSTR-MKIALGAAKGLAFL 199
K+ + + +V E G L ++ R ++S + MK + A LA+
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA---LAYF 140
Query: 200 HDAEKPVIYRDFKASNILLDSDYT---AKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
H + V+++D K NIL K+ DFGLA+ D H ST GT Y AP
Sbjct: 141 HS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEH-STNAAGTALYMAP 195
Query: 257 EYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIM 316
E V +T D++S GVV+ LL+G + + Q + P N A + R +
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP--NYAVEC-RPL 251
Query: 317 DPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
P +A L Q L+ P++RP+ + V+
Sbjct: 252 TP------------QAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLTEVI 133
Q + +GEG +G V K + + VA+K + L EG+ L E+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA------KNRETHEIVALKRVRLDDDDEGVPSSA--LREIC 53
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA---- 189
L +L+H ++V+L ++ LV+E+ +Q ++Y S +I
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
KGL F H + V++RD K N+L++ + KL+DFGLA+ G + +
Sbjct: 108 FQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVV 163
Query: 250 TQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSV 287
T Y P+ + L S S D++S G + EL + + +
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG VH+ + A K + E+ + LRHP LV
Sbjct: 59 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L ++ +++YE+M G L ++ ++ + ++ KGL +H E
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH--ENN 169
Query: 206 VIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH 263
++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 226
Query: 264 LTSMSDVYSFGVVLLELLSG 283
+ +D++S GV+ LLSG
Sbjct: 227 VGYYTDMWSVGVLSYILLSG 246
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 113/296 (38%), Gaps = 47/296 (15%)
Query: 80 FSSSNFL---GEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLTEVIF 134
F NFL E G + KG Q + VK L + + R++ E
Sbjct: 9 FKQLNFLTKLNENHSGELWKG--------RWQGNDIVVKVLKVRDWSTRKSRDFNEECPR 60
Query: 135 LGQLRHPHLVKLIGYC--CEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
L HP+++ ++G C H L+ + P GSL N L + + S +K AL
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDX 120
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG--- 249
A+G AFLH E + + ++ +D D TA++S D S + G
Sbjct: 121 ARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARIS----------XADVKFSFQSPGRXY 170
Query: 250 TQGYAAPEYVMTGHLTS---MSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPML 306
+ APE + + +D +SF V+L EL++ RE + L
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT-----------REVPFAD-----L 214
Query: 307 NDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVVKTLEPLKD 362
++ ++ L + + L C + P +RP +V LE +D
Sbjct: 215 SNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG--HREWLTEVIFLGQLRHPHL 143
LG+G F V + K+ G Q A K ++ + L H++ E L+HP++
Sbjct: 12 LGKGAFSVVRRCM---KIPTG---QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
V+L EE LV++ + G L E+ + R Y S ++ L + H
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-----HCH 120
Query: 203 EKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
+++RD K N+LL S KL+DFGLA + +GD GT GY +PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 260 MTGHLTSMSDVYSFGVVLLELLSG 283
D+++ GV+L LL G
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVG 202
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 45/280 (16%)
Query: 85 FLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR---- 139
LG+GGFG V G + D+L+ ++ P + L L EV L ++
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRN-RVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 140 HPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFL 199
HP +++L+ + +E +LV E R LF + P A
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 200 HDAEKPVIYRDFKASNILLD-SDYTAKLSDFG---LAKDGPEGDDTHVSTRVMGTQGYAA 255
H + V++RD K NIL+D AKL DFG L D P D GT+ Y+
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD-------FDGTRVYSP 206
Query: 256 PEYVMTGHLTSM-SDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR 314
PE++ ++ + V+S G++L +++ G +R+Q ++E
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPF-----ERDQEILE-------------- 247
Query: 315 IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTVV 354
E + + AL +CL+ +P RP++ ++
Sbjct: 248 -----AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 86 LGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
LG+G +G V+ G + +++R +A+K + + + E+ L+H ++V
Sbjct: 16 LGKGTYGIVYAGRDLSNQVR-------IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 145 KLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYS------VSLPWSTRMKIALGAAKGLAF 198
+ +G E + E +P GSL L ++ ++ + T+ + +GL +
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKY 123
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAP 256
LHD + +++RD K N+L+++ Y+ K+SDFG +K G + T GT Y AP
Sbjct: 124 LHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKR-LAGINPCTET-FTGTLQYMAP 178
Query: 257 EYVMTG--HLTSMSDVYSFGVVLLELLSGR 284
E + G +D++S G ++E+ +G+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ + D++S G ++ EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 40/275 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL--DLEGLQGHREWLTEVIFLGQLRHPHL 143
LG G +G V +K+R Q +AVK + + + R + I + + P
Sbjct: 15 LGRGAYGVV------EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----SLPWSTRMKIALGAAKGLAFL 199
V G E + E M SL+ F + + ++P KIA+ K L L
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDK--FYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 200 HDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
H ++ VI+RD K SN+L+++ K+ DFG++ G DD G + Y APE +
Sbjct: 126 H-SKLSVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDIDA-GCKPYMAPERI 181
Query: 260 -----MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR 314
G+ + SD++S G+ ++EL R D W P ++L +
Sbjct: 182 NPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-----------SWGTPF----QQLKQ 225
Query: 315 IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT 349
+++ ++ + + QCL K+RPT
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG G FG VH+ + A K + E+ + LRHP LV
Sbjct: 165 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
L ++ +++YE+M G L ++ ++ + ++ KGL +H E
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH--ENN 275
Query: 206 VIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGH 263
++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 332
Query: 264 LTSMSDVYSFGVVLLELLSG 283
+ +D++S GV+ LLSG
Sbjct: 333 VGYYTDMWSVGVLSYILLSG 352
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 40/275 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL--DLEGLQGHREWLTEVIFLGQLRHPHL 143
LG G +G V +K+R Q +AVK + + + R + I + + P
Sbjct: 59 LGRGAYGVV------EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV----SLPWSTRMKIALGAAKGLAFL 199
V G E + E M SL+ F + + ++P KIA+ K L L
Sbjct: 113 VTFYGALFREGDVWICMELM-DTSLDK--FYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 200 HDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
H ++ VI+RD K SN+L+++ K+ DFG++ D+ T G + Y APE +
Sbjct: 170 H-SKLSVIHRDVKPSNVLINALGQVKMCDFGISG---YLVDSVAKTIDAGCKPYMAPERI 225
Query: 260 -----MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGR 314
G+ + SD++S G+ ++EL R D W P ++L +
Sbjct: 226 NPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-----------SWGTPF----QQLKQ 269
Query: 315 IMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT 349
+++ ++ + + QCL K+RPT
Sbjct: 270 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 77 TQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLG 136
T + +G+G F V + KL G + + L + H++ E
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCV---KLCTGHEYAAKIINTKKLSA-RDHQKLEREARICR 58
Query: 137 QLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKG 195
L+H ++V+L EE LV++ + G L E+ + R Y S ++ L A
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-- 116
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
LH + V++RD K N+LL S KL+DFGLA + +GD GT G
Sbjct: 117 ---LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPG 171
Query: 253 YAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
Y +PE + D+++ GV+L LL G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 79 SFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQL 138
++++ +G G FG V + + +++ VA+K + LQ R E+ + +
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKL-------VESDEVAIKKV----LQDKRFKNRELQIMRIV 89
Query: 139 RHPHLVKLIGYCC------EEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMKIALG 191
+HP++V L + +E LV EY+P ++ + + ++P
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 192 AAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGT 250
+ LA++H + +RD K N+LLD KL DFG AK G+ + + +
Sbjct: 150 LLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICS 204
Query: 251 QGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
+ Y APE + + T+ D++S G V+ EL+ G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 167
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVM 248
A +LH + +IYRD K N+L+D +++DFG AK T +
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LC 220
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQG--HREWLTEVIFLGQLRHPHL 143
LG+G F V + K+ G Q A K ++ + L H++ E L+HP++
Sbjct: 12 LGKGAFSVVRRCM---KIPTG---QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 144 VKLIGYCCEEEHRLLVYEYMPRGSL-ENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDA 202
V+L EE LV++ + G L E+ + R Y S ++ L + H
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-----HCH 120
Query: 203 EKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYV 259
+++RD K N+LL S KL+DFGLA + +GD GT GY +PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 260 MTGHLTSMSDVYSFGVVLLELLSG 283
D+++ GV+L LL G
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVG 202
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G ++ V+ T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVV-TRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + T + T+ Y
Sbjct: 136 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVVTRYYR 190
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ EL+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 133
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 134 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTW 183
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 86 LGEGGFGAVHKG--------FIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQ 137
LG G FG VH+ F+ + VKN E+ + Q
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN--------------EISIMNQ 104
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLA 197
L HP L+ L ++ +L+ E++ G L +++ + + + A +GL
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLK 163
Query: 198 FLHDAEKPVIYRDFKASNILLDSDY--TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
+H E +++ D K NI+ ++ + K+ DFGLA + V+T T +AA
Sbjct: 164 HMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAA 218
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSG 283
PE V + +D+++ GV+ LLSG
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 165 RGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTA 224
R SLE+ R + V L I + A+ + FLH K +++RD K SNI D
Sbjct: 155 RCSLED---REHGVCL------HIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVV 203
Query: 225 KLSDFGL--AKDGPEGDDTHVSTRV--------MGTQGYAAPEYVMTGHLTSMSDVYSFG 274
K+ DFGL A D E + T ++ +GT+ Y +PE + + + D++S G
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
Query: 275 VVLLELL 281
++L ELL
Sbjct: 264 LILFELL 270
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P L KL + + +V EY P G + + L R P R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARF-Y 147
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D K++DFG AK V R
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 197
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR 139
F G+G FG V G + VA+K + + +RE L + L L
Sbjct: 25 FQVERMAGQGTFGTVQLG------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLH 77
Query: 140 HPHLVKLIGY---CCEEEHRLL----VYEYMPRG--SLENQLFRRYSVSLPWSTRMKIAL 190
HP++V+L Y E + R + V EY+P +RR P ++
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-FLF 136
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILL-DSDYTAKLSDFGLAK--DGPEGDDTHVSTRV 247
+ + LH V +RD K N+L+ ++D T KL DFG AK E + ++ +R
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 248 MGTQGYAAPEYVM-TGHLTSMSDVYSFGVVLLELLSG 283
Y APE + H T+ D++S G + E++ G
Sbjct: 197 -----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+++D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 50/235 (21%)
Query: 80 FSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIF 134
F LG+G FG V K R L ++ A+K + H E L+EV
Sbjct: 8 FEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVXL 55
Query: 135 LGQLRHPHLVKLIGYCCEEEHRLLV---------------YEYMPRGSLENQLFRRYSVS 179
L L H ++V+ Y E R V EY +L + L +++
Sbjct: 56 LASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLN 112
Query: 180 LPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGD 239
++ + L+++H + +I+R+ K NI +D K+ DFGLAK+
Sbjct: 113 QQRDEYWRLFRQILEALSYIH--SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 240 D------------THVSTRVMGTQGYAAPEYV-MTGHLTSMSDVYSFGVVLLELL 281
D + T +GT Y A E + TGH D YS G++ E +
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 85 FLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEVIFLGQLRHPH 142
+G G +G V+ + + + VA+K ++ E L + L E+ L +L+ +
Sbjct: 33 LIGRGSYGYVYLAYDKN------TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 143 LVKLIGYCCEEEHRLLVYE--YMPRGSLENQLFRRYSVSLPWSTR--MKIALGAAKGLAF 198
+++L ++ LL ++ Y+ ++ L + + + + I G F
Sbjct: 87 IIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVS-------------- 244
+H E +I+RD K +N LL+ D + K+ DFGLA+ DT++
Sbjct: 145 IH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 245 ------TRVMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGRKS 286
T + T+ Y APE ++ + T D++S G + ELL+ +S
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R + P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 78 QSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDL----EGLQGHREWLTEVI 133
Q + +GEG +G V K + + VA+K + L EG+ L E+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA------KNRETHEIVALKRVRLDDDDEGVPSSA--LREIC 53
Query: 134 FLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIA---- 189
L +L+H ++V+L ++ LV+E+ +Q ++Y S +I
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMG 249
KGL F H + V++RD K N+L++ + KL++FGLA+ G + +
Sbjct: 108 FQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVV 163
Query: 250 TQGYAAPEYVMTGHLTSMS-DVYSFGVVLLEL 280
T Y P+ + L S S D++S G + EL
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 48/306 (15%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
+ L NL+ +++ V + +S +G GG V + + K Q A+K +
Sbjct: 11 VDLGTENLYFQSMS---VKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYV 60
Query: 118 DLEGL--QGHREWLTEVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQL 172
+LE Q + E+ +L +L+ +++L Y +++ +Y M G+++ N
Sbjct: 61 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSW 117
Query: 173 FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA 232
++ PW R + + +H + +++ D K +N L+ D KL DFG+A
Sbjct: 118 LKKKKSIDPWE-RKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
Query: 233 KDGPEGDDTHVSTRVMGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELL 281
+ V +GT Y PE + ++ SDV+S G +L +
Sbjct: 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 282 SGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLS 341
G+ + ++N KL I+DP E ++ + + + CL
Sbjct: 234 YGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 278
Query: 342 HRPKQR 347
PKQR
Sbjct: 279 RDPKQR 284
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + + T+ Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMVPFVVTRYYR 194
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLELLSG 283
APE ++ D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ ++ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL------DLEGLQGHREWLTEVIFLGQLR 139
+G G +GAV +D G VA+K L +L + +RE + L +R
Sbjct: 33 VGSGAYGAVCSA-VD-----GRTGAKVAIKKLYRPFQSELFAKRAYRE----LRLLKHMR 82
Query: 140 HPHLVKLIGYCCEEE------HRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK-IALGA 192
H +++ L+ +E LV +M G+ +L + + R++ +
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLG---EDRIQFLVYQM 137
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQG 252
KGL ++H A +I+RD K N+ ++ D K+ DFGLA+ D+ + V+ T+
Sbjct: 138 LKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQA----DSEMXGXVV-TRW 190
Query: 253 YAAPEYVMTG-HLTSMSDVYSFGVVLLELLSGR 284
Y APE ++ T D++S G ++ E+++G+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 89/220 (40%), Gaps = 26/220 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQ-AQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLV 144
LGEGGF V L GL A+K + Q E E HP+++
Sbjct: 37 LGEGGFSYV-------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 145 KLIGYCCEE----EHRLLVYEYMPRGSLENQLFRRYSVS--LPWSTRMKIALGAAKGLAF 198
+L+ YC E L+ + RG+L N++ R L + + LG +GL
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 199 LHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP---EGDDTHVSTRVMGTQ---- 251
+H K +RD K +NILL + L D G EG ++ + Q
Sbjct: 150 IH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 252 GYAAPE-YVMTGH--LTSMSDVYSFGVVLLELLSGRKSVD 288
Y APE + + H + +DV+S G VL ++ G D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCE--EEHRLLVYEYMPRGS-LENQLFRRYSVSLPWSTRMK 187
E+ L +L HP++VKL+ + E+H +V+E + +G +E + S R
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED---QARFY 142
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
KG+ +LH + +I+RD K SN+L+ D K++DFG++ + +G D +S V
Sbjct: 143 FQ-DLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTV 198
Query: 248 MGTQGYAAPE------YVMTGHLTSMSDVYSFGVVLLELLSGR 284
GT + APE + +G DV++ GV L + G+
Sbjct: 199 -GTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQ 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R P R
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF-Y 141
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 142 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 191
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R P R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF-Y 167
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 217
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G + V+ T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-TRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-----MKIALGA 192
L+HPH+V+L+ + +V+E+M L ++ +R +S M+ L A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGDDTHVSTRVMG 249
L + HD +I+RD K +LL S + KL FG+A G+ V+ +G
Sbjct: 145 ---LRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVG 197
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T + APE V DV+ GV+L LLSG
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 48/309 (15%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
+ L NL+ +++ V + +S +G GG V + + K Q A+K +
Sbjct: 11 VDLGTENLYFQSMS---VKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYV 60
Query: 118 DLEGL--QGHREWLTEVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQL 172
+LE Q + E+ +L +L+ +++L Y +++ +Y M G+++ N
Sbjct: 61 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSW 117
Query: 173 FRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA 232
++ PW R + + +H + +++ D K +N L+ D KL DFG+A
Sbjct: 118 LKKKKSIDPWE-RKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
Query: 233 KDGPEGDDTHVSTRVMGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELL 281
V +GT Y PE + ++ SDV+S G +L +
Sbjct: 174 NQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 282 SGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLS 341
G+ + ++N KL I+DP E ++ + + + CL
Sbjct: 234 YGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 278
Query: 342 HRPKQRPTM 350
PKQR ++
Sbjct: 279 RDPKQRISI 287
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 138 LRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-----MKIALGA 192
L+HPH+V+L+ + +V+E+M L ++ +R +S M+ L A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGDDTHVSTRVMG 249
L + HD +I+RD K +LL S + KL FG+A G+ V+ +G
Sbjct: 143 ---LRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVG 195
Query: 250 TQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T + APE V DV+ GV+L LLSG
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 58 ISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNL 117
+ L NL+ ++ E + LG G F V K R + A K +
Sbjct: 11 VDLGTENLYFQSMVE-----DHYEMGEELGSGQFAIVRK------CRQKGTGKEYAAKFI 59
Query: 118 DLEGLQGHREWLT------EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQ 171
L R ++ EV L ++RHP+++ L + +L+ E + G L +
Sbjct: 60 KKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDF 119
Query: 172 LFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLS 227
L + S++ +T+ + G+ +LH K + + D K NI LLD + KL
Sbjct: 120 LAEKESLTEDEATQFLKQI--LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLI 175
Query: 228 DFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
DFG+A G++ + GT + APE V L +D++S GV+ LLSG
Sbjct: 176 DFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 143 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ + + T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L ++RHP+++ L + +L+ E + G L + L + S++ +T+ +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFG+A G++
Sbjct: 125 --LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L ++RHP+++ L + +L+ E + G L + L + S++ +T+ +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFG+A G++
Sbjct: 118 --LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 170
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 59/302 (19%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
LG GG G V +D + VA+K + L Q + L E+ + +L H ++VK
Sbjct: 19 LGCGGNGLVFSAVDNDC------DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 146 L--------------IGYCCEEEHRLLVYEYM--------PRGSLENQLFRRYSVSLPWS 183
+ +G E +V EYM +G L + R + L
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQL--- 129
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDS-DYTAKLSDFGLAK--DGPEGDD 240
+GL ++H A V++RD K +N+ +++ D K+ DFGLA+ D
Sbjct: 130 ---------LRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK 178
Query: 241 THVSTRVMGTQGYAAPEYVMT-GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
H+S ++ T+ Y +P +++ + T D+++ G + E+L+G+ + + L+
Sbjct: 179 GHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 300 EWARPMLN--DARKLGRIMDPRLEGQYSETG----------ARKAAALAYQCLSHRPKQR 347
+ P+++ D ++L ++ + +E +R+A Q L+ P R
Sbjct: 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 348 PT 349
T
Sbjct: 298 LT 299
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 63/307 (20%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR-H 140
S LG G G V + Q +PVAVK + ++ L E+ L + H
Sbjct: 19 SEKILGYGSSGTV-------VFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDH 68
Query: 141 PHLVKLIGYCCEEEHRLL----------VYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
P++++ YC E R L + + + ++ ++ + P S +IA
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA- 125
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLD--SDYTAK-----------LSDFGLAKDGPE 237
G+A LH + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 126 ---SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 238 GDDTHVST--RVMGTQGYAAPEYVMTGH-------LTSMSDVYSFGVVLLELLSGRKSVD 288
G + + GT G+ APE + + LT D++S G V +LS K
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 289 KSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRP 348
+ RE +++ G ++ + + +A L Q + H P +RP
Sbjct: 241 GDKYSRESNIIR------------GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
Query: 349 TMSTVVK 355
T V++
Sbjct: 289 TAMKVLR 295
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 136 GQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKG 195
G+L+ PH+V + + E + +L V + G RR P + +A+ G
Sbjct: 89 GRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQG---PLAPPRAVAIVRQIG 144
Query: 196 LAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAA 255
A +RD K NIL+ +D A L DFG+A + T + V GT Y A
Sbjct: 145 SALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXA 203
Query: 256 PEYVMTGHLTSMSDVYSFGVVLLELLSG 283
PE H T +D+Y+ VL E L+G
Sbjct: 204 PERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ HP+++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---N 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT Y AP +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 59
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 60 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 115
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 116 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+GT Y PE + ++ SDV+S G +L + G+ +
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 225
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
++N KL I+DP E ++ + + + CL PKQR
Sbjct: 226 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 103
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 159
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+GT Y PE + ++ SDV+S G +L + G+ +
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 269
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
++N KL I+DP E ++ + + + CL PKQR
Sbjct: 270 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 125 HREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSL---ENQLF---RRYSV 178
+ ++ E+ + +++ + + G + ++YEYM S+ + F + Y+
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 179 SLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 238
+P I +++H+ EK + +RD K SNIL+D + KLSDFG +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGES------ 199
Query: 239 DDTHVSTRVMGTQG---YAAPEYVM--TGHLTSMSDVYSFGVVL 277
+ V ++ G++G + PE+ + + + D++S G+ L
Sbjct: 200 -EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 195 GLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYA 254
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G + V+ T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-TRYYR 192
Query: 255 APEYVMTGHLTSMSDVYSFGVVLLE------LLSGRKSVDKSRPQREQ 296
APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRR-YSVSLPWSTRMKIA 189
E+ L +++H ++V L H LV + + G L +++ R S ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
L A K +LH E +++RD K N+L + + ++DFGL+K G + +
Sbjct: 116 LSAVK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMST 166
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
GT GY APE + + D +S GV+ LL G
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 123 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 174
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 216
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 45/294 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 55
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 56 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 111
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 112 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+GT Y PE + ++ SDV+S G +L + G+ +
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 221
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
++N KL I+DP E ++ + + + CL PKQR ++
Sbjct: 222 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R L + VAVK ++ G E+I LRHP++V+
Sbjct: 28 IGSGNFGVARL------MRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKP 205
H ++ EY G L ++ S + L G+++ H +
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL--LSGVSYCHSMQ-- 136
Query: 206 VIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVMTG 262
+ +RD K N LLD K+ DFG +K H + +GT Y APE ++
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV----LHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 263 HLT-SMSDVYSFGVVLLELLSG 283
++DV+S GV L +L G
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVG 214
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 123 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 174
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 216
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 130 TEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRR-YSVSLPWSTRMKI 188
TE+ L +L HP+++KL LV E + G L +++ + Y + +K
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGDDTHVST 245
L A +A+LH E +++RD K N+L + D K++DFGL+K + +
Sbjct: 157 ILEA---VAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMK 208
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
V GT GY APE + D++S G++ LL G
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 45/294 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 56
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 57 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 112
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 113 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+GT Y PE + ++ SDV+S G +L + G+ +
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 222
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
++N KL I+DP E ++ + + + CL PKQR ++
Sbjct: 223 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 179 SLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 238
++P KIA+ K L LH ++ VI+RD K SN+L+++ K DFG++ G
Sbjct: 132 TIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGIS--GYLV 188
Query: 239 DDTHVSTRVMGTQGYAAPEYV-----MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQ 293
DD G + Y APE + G+ + SD++S G+ +EL R D
Sbjct: 189 DDVAKDIDA-GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYDS---- 242
Query: 294 REQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPT 349
W P ++L ++++ ++ + + QCL K+RPT
Sbjct: 243 -------WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLE----GLQGHREWLTEVIFLGQLRHP 141
LGEG +G V+K ID + + VA+K + LE G+ G + EV L +L+H
Sbjct: 42 LGEGTYGEVYKA-IDT-----VTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHR 93
Query: 142 HLVKLIGYCCEEEHRL-LVYEYMPRGSLENQLFRRYSVSLPWSTRM--KIALGAAKGLAF 198
++++L HRL L++EY EN L + + S R+ G+ F
Sbjct: 94 NIIELKS-VIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 199 LHDAEKPVIYRDFKASNILL---DSDYTA--KLSDFGLAKDGPEGDDTHVSTRVMGTQGY 253
H + ++RD K N+LL D+ T K+ DFGLA+ G T + T Y
Sbjct: 148 CHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWY 203
Query: 254 AAPEYVM-TGHLTSMSDVYSFGVVLLELL 281
PE ++ + H ++ D++S + E+L
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 119/303 (39%), Gaps = 59/303 (19%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR-H 140
S LG G G V + Q +PVAVK + ++ L E+ L + H
Sbjct: 37 SEKILGYGSSGTV-------VFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDH 86
Query: 141 PHLVKLIGYCCEEEHRLL----------VYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
P++++ YC E R L + + + ++ ++ + P S +IA
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA- 143
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLD--SDYTAK-----------LSDFGLAKDGPE 237
G+A LH + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 144 ---SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 238 GDDTHVST--RVMGTQGYAAPEYVMTG---HLTSMSDVYSFGVVLLELLSGRKSVDKSRP 292
G GT G+ APE + LT D++S G V +LS K +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 293 QREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMST 352
RE +++ G ++ + + +A L Q + H P +RPT
Sbjct: 259 SRESNIIR------------GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 353 VVK 355
V++
Sbjct: 307 VLR 309
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 119/303 (39%), Gaps = 59/303 (19%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR-H 140
S LG G G V + Q +PVAVK + ++ L E+ L + H
Sbjct: 37 SEKILGYGSSGTV-------VFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDH 86
Query: 141 PHLVKLIGYCCEEEHRLL----------VYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
P++++ YC E R L + + + ++ ++ + P S +IA
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA- 143
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLD--SDYTAK-----------LSDFGLAKDGPE 237
G+A LH + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 144 ---SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 238 GDDTHVST--RVMGTQGYAAPEYVMTG---HLTSMSDVYSFGVVLLELLSGRKSVDKSRP 292
G GT G+ APE + LT D++S G V +LS K +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 293 QREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMST 352
RE +++ G ++ + + +A L Q + H P +RPT
Sbjct: 259 SRESNIIR------------GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 353 VVK 355
V++
Sbjct: 307 VLR 309
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKI 188
L E L + P LVKL + + +V EY+ G + + L R S P R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF-Y 146
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR-- 246
A +LH + +IYRD K N+L+D +++DFG AK V R
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 247 -VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT APE +++ D ++ GV++ E+ +G
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 103
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 159
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+GT Y PE + ++ SDV+S G +L + G+ +
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 269
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQR 347
++N KL I+DP E ++ + + + CL PKQR
Sbjct: 270 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR-MKIA 189
EV L +++HP+++ L + +L+ E + G L + L + S++ +T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 190 LGAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVST 245
L G+ +LH + + + D K NI LLD + K+ DFGLA G++
Sbjct: 124 LN---GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 246 RVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPM 305
+ GT + APE V L +D++S GV+ LLSG A P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 217
Query: 306 LNDARK--LGRI--MDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
L D ++ L + ++ E +Y + A + L PK+R T+
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 120/307 (39%), Gaps = 63/307 (20%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR-H 140
S LG G G V + Q +PVAVK + ++ L E+ L + H
Sbjct: 19 SEKILGYGSSGTV-------VFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDH 68
Query: 141 PHLVKLIGYCCEEEHRLL----------VYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
P++++ YC E R L + + + ++ ++ + P S +IA
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA- 125
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLD--SDYTAK-----------LSDFGLAKDGPE 237
G+A LH + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 126 ---SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 238 GDDTHVST--RVMGTQGYAAPEYVMTGH-------LTSMSDVYSFGVVLLELLSGRKSVD 288
G GT G+ APE + + LT D++S G V +LS K
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 289 KSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRP 348
+ RE +++ G ++ + + +A L Q + H P +RP
Sbjct: 241 GDKYSRESNIIR------------GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
Query: 349 TMSTVVK 355
T V++
Sbjct: 289 TAMKVLR 295
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R + VAVK ++ G + E+I LRHP++V+
Sbjct: 26 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 78
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--IALGAAKGLAFLHDAE 203
H +V EY G +LF R + +S G+++ H +
Sbjct: 79 FKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 204 KPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVM 260
V +RD K N LLD K+ DFG +K H + +GT Y APE ++
Sbjct: 135 --VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV----LHSQPKSTVGTPAYIAPEVLL 188
Query: 261 TGHLT-SMSDVYSFGVVLLELLSG 283
++DV+S GV L +L G
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 73 LKVTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGL--QGHREWLT 130
+ V + +S +G GG V + + K Q A+K ++LE Q +
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRN 103
Query: 131 EVIFLGQLRH--PHLVKLIGYCCEEEHRLLVYEYMPRGSLE-NQLFRRYSVSLPWSTRMK 187
E+ +L +L+ +++L Y +++ +Y M G+++ N ++ PW R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWE-RKS 159
Query: 188 IALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRV 247
+ + +H + +++ D K +N L+ D KL DFG+A + V
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 248 MGTQGYAAPEYV-----------MTGHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQ 296
+G Y PE + ++ SDV+S G +L + G+ +
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------- 269
Query: 297 SLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTM 350
++N KL I+DP E ++ + + + CL PKQR ++
Sbjct: 270 --------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 52/265 (19%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAV-----------HKGFIDDKLRPGLQAQPVAVKNLD 118
+ E+++ + F +G G FG V + I +K +A+ +
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 119 LEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV 178
+ G +W+T + + Q +E H LV +Y G L L ++
Sbjct: 126 DVLVNGDCQWITALHYAFQ--------------DENHLYLVMDYYVGGDLLT-LLSKFED 170
Query: 179 SLP------WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA 232
LP + M +A+ + L ++H RD K N+LLD + +L+DFG
Sbjct: 171 KLPEDMARFYIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSC 222
Query: 233 KDGPEGDDTHVSTRVMGTQGYAAPEYVMT-----GHLTSMSDVYSFGVVLLELLSGRKSV 287
+ D T S+ +GT Y +PE + G D +S GV + E+L G
Sbjct: 223 LKMND-DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET-- 279
Query: 288 DKSRPQREQSLVEWARPMLNDARKL 312
P +SLVE ++N +
Sbjct: 280 ----PFYAESLVETYGKIMNHEERF 300
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 178 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 234 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSXECQHL 267
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 178 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 234 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSSECQHL 267
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPV------AVKNLDLEGLQGHREWLTEVIFLGQLR 139
L EGGF V+ +AQ V A+K L + +R + EV F+ +L
Sbjct: 36 LAEGGFAFVY------------EAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 140 -HPHLVKLIGYCC---EE----EHRLLVYEYMPRGSLENQLFRRYSVS-LPWSTRMKIAL 190
HP++V+ EE + L+ + +G L L + S L T +KI
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA 232
+ + +H + P+I+RD K N+LL + T KL DFG A
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 177 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 233 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSXECQHL 266
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 178 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 234 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSXECQHL 267
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 177 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 233 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSSECQHL 266
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEE----HRLLVYEYMPRGSLENQLFR-RYSVSLPWS 183
+ E L +L H ++VKL + EEE H++L+ E+ P GSL L + LP S
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILL----DSDYTAKLSDFGLAKDGPEGD 239
+ + G+ H E +++R+ K NI+ D KL+DFG A++ E D
Sbjct: 113 EFLIVLRDVVGGMN--HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDD 169
Query: 240 DTHVSTRVMGTQGYAAPEYVMTGHLT--------SMSDVYSFGVVLLELLSG 283
+ VS + GT+ Y P+ L + D++S GV +G
Sbjct: 170 EQFVS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R + VAVK ++ G + E+I LRHP++V+
Sbjct: 27 IGAGNFGVARL------MRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--IALGAAKGLAFLHDAE 203
H +V EY G +LF R + +S G+++ H +
Sbjct: 80 FKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 204 KPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVM 260
V +RD K N LLD K++DFG +K H + +GT Y APE ++
Sbjct: 136 --VAHRDLKLENTLLDGSPAPRLKIADFGYSK----ASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 261 TGHLT-SMSDVYSFGVVLLELLSG 283
++DV+S GV L +L G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 52/265 (19%)
Query: 70 LAELKVTTQSFSSSNFLGEGGFGAV-----------HKGFIDDKLRPGLQAQPVAVKNLD 118
+ E+++ + F +G G FG V + I +K +A+ +
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 119 LEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSV 178
+ G +W+T + + Q +E H LV +Y G L L ++
Sbjct: 142 DVLVNGDCQWITALHYAFQ--------------DENHLYLVMDYYVGGDLLT-LLSKFED 186
Query: 179 SLP------WSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLA 232
LP + M +A+ + L ++H RD K N+LLD + +L+DFG
Sbjct: 187 KLPEDMARFYIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSC 238
Query: 233 KDGPEGDDTHVSTRVMGTQGYAAPEYVMT-----GHLTSMSDVYSFGVVLLELLSGRKSV 287
+ D T S+ +GT Y +PE + G D +S GV + E+L G
Sbjct: 239 LKMND-DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET-- 295
Query: 288 DKSRPQREQSLVEWARPMLNDARKL 312
P +SLVE ++N +
Sbjct: 296 ----PFYAESLVETYGKIMNHEERF 316
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 178 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 234 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSSECQHL 267
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 78/318 (24%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 177 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQ--YSETGARKAAAL 335
+++ G P +D +G GQ + + + + L
Sbjct: 233 YDMVCGDI------------------PFEHDEEIIG--------GQVFFRQRVSSECQHL 266
Query: 336 AYQCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R + VAVK ++ G + E+I LRHP++V+
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVR 79
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--IALGAAKGLAFLHDAE 203
H +V EY G +LF R + +S G+++ H +
Sbjct: 80 FKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 204 KPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVM 260
V +RD K N LLD K+ DFG +K H + +GT Y APE ++
Sbjct: 136 --VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV----LHSQPKSTVGTPAYIAPEVLL 189
Query: 261 TGHLT-SMSDVYSFGVVLLELLSG 283
++DV+S GV L +L G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 157 LLVYEYMPRGSLENQLFRRYSVSLPWSTRM-------KIALGAAKGLAFLHDAEKPVIYR 209
+L+ EY G + +S+ LP M ++ +G+ +LH + +++
Sbjct: 105 ILILEYAAGGEI-------FSLCLPELAEMVSENDVIRLIKQILEGVYYLH--QNNIVHL 155
Query: 210 DFKASNILLDSDY---TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTS 266
D K NILL S Y K+ DFG+++ + +MGT Y APE + +T+
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITT 212
Query: 267 MSDVYSFGVVLLELLS 282
+D+++ G++ LL+
Sbjct: 213 ATDMWNIGIIAYMLLT 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ H +++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ H +++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ H +++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 115/300 (38%), Gaps = 60/300 (20%)
Query: 39 ISFVDLSNPSSTTLSEDLSISLAGSNLHVFTLAELKVTTQSFSSSNFLGEGGFGAV---- 94
I D N S +++ L + + ++++ + F +G G FG V
Sbjct: 35 ICLYDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVK 94
Query: 95 ----HKGF---IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVKLI 147
K F I +K +A+ + + G +W+T + + Q
Sbjct: 95 LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ---------- 144
Query: 148 GYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLP------WSTRMKIALGAAKGLAFLHD 201
++ + LV +Y G L L ++ LP + M IA+ + L ++H
Sbjct: 145 ----DDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH- 198
Query: 202 AEKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGDDTHVSTRVMGTQGYAAPE 257
RD K NIL+D + +L+DFG L +DG T S+ +GT Y +PE
Sbjct: 199 -------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG-----TVQSSVAVGTPDYISPE 246
Query: 258 YVMT-----GHLTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWARPMLNDARKL 312
+ G D +S GV + E+L G P +SLVE ++N +
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET------PFYAESLVETYGKIMNHKERF 300
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ H +++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 131 EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIAL 190
EV L Q+ H +++ L +L+ E + G L + L ++ S+S +T +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGDDTHVSTR 246
G+ +LH K + + D K NI LLD + KL DFGLA + +G +
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 247 VMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
+ GT + APE V L +D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 71/291 (24%)
Query: 85 FLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------EVIFLGQ 137
LG GGFG+V+ G + D L PVA+K+++ + + E EV+ L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 138 LR--HPHLVKLIGYCCEEEHRLLVYEYM-----------PRGSLENQLFRRYSVSLPWST 184
+ +++L+ + + +L+ E M RG+L+ +L R S W
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR----SFFWQV 123
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHV 243
L A + H V++RD K NIL+D + KL DFG G DT V
Sbjct: 124 -----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-V 169
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----------------- 212
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTV 353
P +D + R + + + + + L CL+ RP RPT +
Sbjct: 213 -PFEHDEEII------RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
I L +HP+++ L + +H LV E M G L +++ R+ S ++ + +G
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG- 131
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDY----TAKLSDFGLAKDGPEGDDTHVSTRVM 248
K + +LH + V++RD K SNIL + ++ DFG AK ++ + T
Sbjct: 132 -KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCY 187
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T + APE + D++S G++L +L+G
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 129 LTEVIFLGQLRHPHLVKLIGYCCEEE----HRLLVYEYMPRGSLENQLFR-RYSVSLPWS 183
+ E L +L H ++VKL + EEE H++L+ E+ P GSL L + LP S
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 184 TRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILL----DSDYTAKLSDFGLAKDGPEGD 239
+ + G+ H E +++R+ K NI+ D KL+DFG A+ E +
Sbjct: 113 EFLIVLRDVVGGMN--HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELE 167
Query: 240 DTHVSTRVMGTQGYAAPEYVMTGHLT--------SMSDVYSFGVVLLELLSG 283
D + GT+ Y P+ L + D++S GV +G
Sbjct: 168 DDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
I L +HP+++ L + +H LV E M G L +++ R+ S ++ + +G
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG- 131
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDY----TAKLSDFGLAKDGPEGDDTHVSTRVM 248
K + +LH + V++RD K SNIL + ++ DFG AK ++ + T
Sbjct: 132 -KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCY 187
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T + APE + D++S G++L +L+G
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIFLGQLRH 140
+G+G FG V K R Q VA+K + +E +E L E+ L L+H
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKH 76
Query: 141 PHLVKLIGYC---------CEEEHRLLVYEYMPR---GSLENQLFRRYSVSLPWSTRMKI 188
++V LI C C+ LV+++ G L N L V S ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRV 130
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGDDTHVST 245
GL ++H +++RD KA+N+L+ D KL+DFGLA+
Sbjct: 131 MQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 246 RVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
RV+ T Y PE ++ D++ G ++ E+ + + + Q + +L+
Sbjct: 189 RVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIFLGQLRH 140
+G+G FG V K R Q VA+K + +E +E L E+ L L+H
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKH 76
Query: 141 PHLVKLIGYC---------CEEEHRLLVYEYMPR---GSLENQLFRRYSVSLPWSTRMKI 188
++V LI C C+ LV+++ G L N L V S ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASI-YLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRV 130
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGDDTHVST 245
GL ++H +++RD KA+N+L+ D KL+DFGLA+
Sbjct: 131 MQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 246 RVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
RV+ T Y PE ++ D++ G ++ E+ + + + Q + +L+
Sbjct: 189 RVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 75/293 (25%)
Query: 85 FLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------EVIFLGQ 137
LG GGFG+V+ G + D L PVA+K+++ + + E EV+ L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 138 LR--HPHLVKLIGYCCEEEHRLLVYE-----------YMPRGSLENQLFRRYSVSLPWST 184
+ +++L+ + + +L+ E RG+L+ +L R S W
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----SFFWQV 119
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHV 243
L A + H V++RD K NIL+D + KL DFG G DT V
Sbjct: 120 -----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-V 165
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----------------- 208
Query: 303 RPMLNDARKLGRIMDPRLEGQ--YSETGARKAAALAYQCLSHRPKQRPTMSTV 353
P +D +G GQ + + + + L CL+ RP RPT +
Sbjct: 209 -PFEHDEEIIG--------GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R S W L A + H V++RD K NIL+D
Sbjct: 131 DFITERGALQEELAR----SFFWQV-----LEAVR-----HCHNCGVLHRDIKDENILID 176
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 177 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 233 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSSECQHLIR 268
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 269 WCLALRPSDRPTFEEI 284
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 165 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 221 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSXECQHLIR 256
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 257 WCLALRPSDRPTFEEI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 57
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 163
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 164 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 219
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 220 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSSECQHLIR 255
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 256 WCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 165 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 221 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSSECQHLIR 256
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 257 WCLALRPSDRPTFEEI 272
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 27/206 (13%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R + VAVK ++ G + E+I LRHP++V+
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--IALGAAKGLAFLHDAE 203
H +V EY G +LF R + +S G+++ H +
Sbjct: 80 FKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 204 KPVIYRDFKASNILLDSDYTA--KLSDFGLAKDG---PEGDDTHVSTRVMGTQGYAAPEY 258
V +RD K N LLD K+ FG +K + DT +GT Y APE
Sbjct: 136 --VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT------VGTPAYIAPEV 187
Query: 259 VMTGHLT-SMSDVYSFGVVLLELLSG 283
++ ++DV+S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIFLGQLRH 140
+G+G FG V K R Q VA+K + +E +E L E+ L L+H
Sbjct: 25 IGQGTFGEVFKA------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKH 75
Query: 141 PHLVKLIGYC---------CEEEHRLLVYEYMPR---GSLENQLFRRYSVSLPWSTRMKI 188
++V LI C C+ LV+++ G L N L V S ++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRV 129
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGDDTHVST 245
GL ++H +++RD KA+N+L+ D KL+DFGLA+
Sbjct: 130 MQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 246 RVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
RV+ T Y PE ++ D++ G ++ E+ + + + Q + +L+
Sbjct: 188 RVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 57
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 163
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 164 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 219
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 220 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSXECQHLIR 255
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 256 WCLALRPSDRPTFEEI 271
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHRE-----WLTEVIFLGQLRH 140
+G+G FG V K R Q VA+K + +E +E L E+ L L+H
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKH 76
Query: 141 PHLVKLIGYC---------CEEEHRLLVYEYMPR---GSLENQLFRRYSVSLPWSTRMKI 188
++V LI C C+ LV+++ G L N L V S ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRV 130
Query: 189 ALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGDDTHVST 245
GL ++H +++RD KA+N+L+ D KL+DFGLA+
Sbjct: 131 MQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 246 RVMGTQGYAAPEYVMTGH-LTSMSDVYSFGVVLLELLSGRKSVDKSRPQREQSLV 299
RV+ T Y PE ++ D++ G ++ E+ + + + Q + +L+
Sbjct: 189 RVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 38 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 90
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 91 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 150
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 196
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 197 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 252
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 253 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSXECQHLIR 288
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 289 WCLALRPSDRPTFEEI 304
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 85
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 191
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 192 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 247
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 248 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSXECQHLIR 283
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 284 WCLALRPSDRPTFEEI 299
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 85
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 191
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 192 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 247
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 248 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSSECQHLIR 283
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 284 WCLALRPSDRPTFEEI 299
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 165 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 221 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSXECQHLIR 256
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 257 WCLALRPXDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 63 SNLHVFTLA---ELKVTTQSFSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLD 118
++LH LA E + + LG GGFG+V+ G + D L PVA+K+++
Sbjct: 25 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 77
Query: 119 LEGLQGHREWLT------EVIFLGQLR--HPHLVKLIGYCCEEEHRLLVYE--------- 161
+ + E EV+ L ++ +++L+ + + +L+ E
Sbjct: 78 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 137
Query: 162 --YMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLD 219
RG+L+ +L R + + + R H V++RD K NIL+D
Sbjct: 138 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 183
Query: 220 SDY-TAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVL 277
+ KL DFG G DT V T GT+ Y+ PE++ S V+S G++L
Sbjct: 184 LNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 239
Query: 278 LELLSGRKSVDKSRPQREQSLVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAY 337
+++ G P +D + R + + + + + L
Sbjct: 240 YDMVCGDI------------------PFEHDEEII------RGQVFFRQRVSSECQHLIR 275
Query: 338 QCLSHRPKQRPTMSTV 353
CL+ RP RPT +
Sbjct: 276 WCLALRPSDRPTFEEI 291
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGA 192
I L +HP+++ L + ++ +V E M G L +++ R+ S ++ + +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI-- 125
Query: 193 AKGLAFLHDAEKPVIYRDFKASNILLDSDY----TAKLSDFGLAKDGPEGDDTHVSTRVM 248
K + +LH + V++RD K SNIL + + ++ DFG AK ++ + T
Sbjct: 126 TKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMTPCY 182
Query: 249 GTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
T + APE + + D++S GV+L +L+G
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 158 LVYEYMPRGSLENQLF-RRYSVSLPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNI 216
LV+E M GS+ + + RR+ L S + A L FLH+ K + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 217 LLDSDYT---AKLSDFGLAKD-GPEGDDTHVSTRVM----GTQGYAAPEYV-----MTGH 263
L + K+ DFGL GD + +ST + G+ Y APE V
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 264 LTSMSDVYSFGVVLLELLSG 283
D++S GV+L LLSG
Sbjct: 203 YDKRCDLWSLGVILYILLSG 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 23/204 (11%)
Query: 86 LGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLRHPHLVK 145
+G G FG +R + VAVK ++ G + E+I LRHP++V+
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 146 LIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMK--IALGAAKGLAFLHDAE 203
H +V EY G +LF R + +S G+++ H +
Sbjct: 80 FKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 204 KPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGDDTHVSTR-VMGTQGYAAPEYVM 260
V +RD K N LLD K+ FG +K H + +GT Y APE ++
Sbjct: 136 --VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV----LHSQPKSTVGTPAYIAPEVLL 189
Query: 261 TGHLT-SMSDVYSFGVVLLELLSG 283
++DV+S GV L +L G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 71/296 (23%)
Query: 80 FSSSNFLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------EV 132
+ LG GGFG+V+ G + D L PVA+K+++ + + E EV
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRVPMEV 58
Query: 133 IFLGQLR--HPHLVKLIGYCCEEEHRLLVYE-----------YMPRGSLENQLFRRYSVS 179
+ L ++ +++L+ + + +L+ E RG+L+ +L R S
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----S 114
Query: 180 LPWSTRMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEG 238
W L A + H V++RD K NIL+D + KL DFG G
Sbjct: 115 FFWQV-----LEAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALL 161
Query: 239 DDTHVSTRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQS 297
DT V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 162 KDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------ 208
Query: 298 LVEWARPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTV 353
P +D + R + + + + + L CL+ RP RPT +
Sbjct: 209 ------PFEHDEEII------RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 75 VTTQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLD--LEGLQGHREWLTEV 132
V + + + LGEG FG V + ID K G VKN+D E + + L +
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVEC-IDHKA-GGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 133 IFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTR--MKIAL 190
V+++ + H +V+E + L F + + LP+ K+A
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 191 GAAKGLAFLHDAEKPVIYRDFKASNIL-LDSDYTA------------------KLSDFGL 231
K + FLH + + + D K NIL + SDYT K+ DFG
Sbjct: 126 QICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 232 AKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLELLSG 283
A DD H ST V T+ Y APE ++ + DV+S G +L+E G
Sbjct: 184 AT----YDDEHHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 82 SSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLTEVIFLGQLR-H 140
+S LGEG + V L+ G + AVK ++ + EV L Q + +
Sbjct: 17 TSELLGEGAYAKVQGAV---SLQNG---KEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 141 PHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLH 200
++++LI + ++ LV+E + GS+ + ++ + ++R+ + AA L FLH
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLH 128
Query: 201 DAEKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGDD-----THVSTRVMGTQG 252
K + +RD K NIL +S K+ DF L + T T G+
Sbjct: 129 T--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 253 YAAPEYV--MTGHLT---SMSDVYSFGVVLLELLSG 283
Y APE V T T D++S GVVL +LSG
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 77 TQSFSSSNFLGEGGFGAVHKGFIDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------ 130
+Q +S+ + LG G FG V +K + V VK + E + W+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEK------NKEVVVKFIKKEKVL-EDCWIEDPKLGK 75
Query: 131 ---EVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRG-SLENQLFRRYSVSLPWSTRM 186
E+ L ++ H +++K++ + LV E G L + R + P ++ +
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 187 KIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTR 246
L +A G L D +I+RD K NI++ D+T KL DFG A G +
Sbjct: 136 FRQLVSAVGYLRLKD----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG---KLFYT 188
Query: 247 VMGTQGYAAPEYVMTG-HLTSMSDVYSFGVVLLELL 281
GT Y APE +M + +++S GV L L+
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 71/291 (24%)
Query: 85 FLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------EVIFLGQ 137
LG GGFG+V+ G + D L PVA+K+++ + + E EV+ L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 138 LR--HPHLVKLIGYCCEEEHRLLVYE-----------YMPRGSLENQLFRRYSVSLPWST 184
+ +++L+ + + +L+ E RG+L+ +L R S W
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----SFFWQV 123
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHV 243
L A + H V++RD K NIL+D + KL DFG G DT V
Sbjct: 124 -----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-V 169
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----------------- 212
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTV 353
P +D + R + + + + + L CL+ RP RPT +
Sbjct: 213 -PFEHDEEII------RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 71/291 (24%)
Query: 85 FLGEGGFGAVHKGF-IDDKLRPGLQAQPVAVKNLDLEGLQGHREWLT------EVIFLGQ 137
LG GGFG+V+ G + D L PVA+K+++ + + E EV+ L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 138 LR--HPHLVKLIGYCCEEEHRLLVYE-----------YMPRGSLENQLFRRYSVSLPWST 184
+ +++L+ + + +L+ E RG+L+ +L R S W
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----SFFWQV 122
Query: 185 RMKIALGAAKGLAFLHDAEKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGDDTHV 243
L A + H V++RD K NIL+D + KL DFG G DT V
Sbjct: 123 -----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-V 168
Query: 244 STRVMGTQGYAAPEYVMTGHLTSMS-DVYSFGVVLLELLSGRKSVDKSRPQREQSLVEWA 302
T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----------------- 211
Query: 303 RPMLNDARKLGRIMDPRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSTV 353
P +D + R + + + + + L CL+ RP RPT +
Sbjct: 212 -PFEHDEEII------RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,882,678
Number of Sequences: 62578
Number of extensions: 448754
Number of successful extensions: 3728
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 1032
Number of HSP's gapped (non-prelim): 1169
length of query: 455
length of database: 14,973,337
effective HSP length: 102
effective length of query: 353
effective length of database: 8,590,381
effective search space: 3032404493
effective search space used: 3032404493
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)