Query 012836
Match_columns 455
No_of_seqs 407 out of 3747
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:49:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012836.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012836hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 2.3E-38 4.9E-43 260.4 14.0 209 8-231 3-212 (226)
2 PHA02791 ankyrin-like protein; 100.0 2.4E-36 5.1E-41 282.3 23.0 220 3-253 25-246 (284)
3 PHA02875 ankyrin repeat protei 100.0 2E-34 4.4E-39 288.5 25.9 227 8-254 2-229 (413)
4 PHA02874 ankyrin repeat protei 100.0 6.5E-34 1.4E-38 286.3 26.6 243 4-276 31-295 (434)
5 KOG4412 26S proteasome regulat 100.0 2.2E-35 4.7E-40 242.8 12.9 196 43-254 3-199 (226)
6 PHA02791 ankyrin-like protein; 100.0 3.9E-33 8.5E-38 260.6 23.6 210 18-254 9-221 (284)
7 PHA03100 ankyrin repeat protei 100.0 2.9E-33 6.3E-38 285.8 24.5 232 5-251 32-307 (480)
8 PHA03100 ankyrin repeat protei 100.0 2.5E-33 5.5E-38 286.3 23.7 236 18-277 12-291 (480)
9 PHA02874 ankyrin repeat protei 100.0 3.7E-32 7.9E-37 273.6 26.9 239 9-277 2-262 (434)
10 PHA02878 ankyrin repeat protei 100.0 2E-32 4.3E-37 278.7 25.2 239 5-277 34-308 (477)
11 PHA03095 ankyrin-like protein; 100.0 3.9E-32 8.4E-37 276.9 25.8 245 3-277 42-298 (471)
12 PHA02875 ankyrin repeat protei 100.0 5E-32 1.1E-36 271.2 25.1 229 4-249 31-263 (413)
13 PHA02946 ankyin-like protein; 100.0 5.3E-32 1.2E-36 270.8 24.2 233 3-251 67-321 (446)
14 KOG0509 Ankyrin repeat and DHH 100.0 9.4E-32 2E-36 261.7 24.6 206 10-231 46-253 (600)
15 PHA02946 ankyin-like protein; 100.0 7.8E-32 1.7E-36 269.7 24.3 224 8-252 37-268 (446)
16 PHA03095 ankyrin-like protein; 100.0 9.6E-32 2.1E-36 274.0 25.4 231 2-253 77-316 (471)
17 PHA02716 CPXV016; CPX019; EVM0 100.0 1.1E-31 2.4E-36 276.9 24.1 240 3-253 207-566 (764)
18 PHA02716 CPXV016; CPX019; EVM0 100.0 2.3E-31 4.9E-36 274.6 24.8 254 5-278 174-544 (764)
19 KOG0510 Ankyrin repeat protein 100.0 8.6E-32 1.9E-36 266.6 19.7 234 4-253 150-403 (929)
20 KOG0510 Ankyrin repeat protein 100.0 5.3E-32 1.2E-36 268.1 17.5 219 2-230 181-417 (929)
21 PHA02876 ankyrin repeat protei 100.0 6.2E-31 1.4E-35 279.0 26.4 230 3-251 173-433 (682)
22 PHA02878 ankyrin repeat protei 100.0 4E-31 8.7E-36 269.1 23.5 226 2-251 64-325 (477)
23 PHA02989 ankyrin repeat protei 100.0 9E-31 2E-35 267.4 24.7 231 6-251 33-313 (494)
24 PHA02798 ankyrin-like protein; 100.0 3.4E-30 7.3E-35 262.8 24.1 231 8-253 36-317 (489)
25 PHA02876 ankyrin repeat protei 100.0 4.1E-30 8.8E-35 272.8 24.9 227 4-253 269-500 (682)
26 PHA02859 ankyrin repeat protei 100.0 1.5E-28 3.3E-33 221.6 19.5 172 42-231 20-200 (209)
27 KOG0509 Ankyrin repeat and DHH 100.0 5.8E-29 1.3E-33 242.3 15.7 210 43-278 44-254 (600)
28 PHA02989 ankyrin repeat protei 100.0 6.8E-28 1.5E-32 246.2 24.5 240 12-277 4-297 (494)
29 KOG0508 Ankyrin repeat protein 100.0 9.9E-29 2.1E-33 231.1 13.6 217 13-248 9-236 (615)
30 PHA02917 ankyrin-like protein; 100.0 2.4E-27 5.2E-32 246.2 23.1 234 3-252 27-301 (661)
31 KOG0508 Ankyrin repeat protein 100.0 1.8E-28 3.8E-33 229.4 11.3 193 4-206 38-237 (615)
32 PHA02859 ankyrin repeat protei 100.0 3.2E-27 7E-32 212.9 19.2 177 5-195 18-203 (209)
33 PHA02798 ankyrin-like protein; 99.9 7.2E-27 1.6E-31 238.4 20.7 197 2-208 65-315 (489)
34 PHA02917 ankyrin-like protein; 99.9 4.6E-26 9.9E-31 236.7 22.2 210 21-252 12-255 (661)
35 KOG4177 Ankyrin [Cell wall/mem 99.9 3E-27 6.4E-32 248.5 11.4 229 5-253 371-632 (1143)
36 PHA02795 ankyrin-like protein; 99.9 8.4E-26 1.8E-30 219.1 19.6 205 25-252 66-287 (437)
37 KOG4177 Ankyrin [Cell wall/mem 99.9 5.3E-27 1.2E-31 246.6 11.1 237 3-254 336-600 (1143)
38 PHA02795 ankyrin-like protein; 99.9 1.6E-25 3.4E-30 217.2 18.2 214 14-252 83-315 (437)
39 TIGR00870 trp transient-recept 99.9 1.9E-25 4.2E-30 239.0 18.2 228 6-252 15-282 (743)
40 PHA02730 ankyrin-like protein; 99.9 1.5E-24 3.2E-29 220.2 23.4 219 16-253 210-524 (672)
41 PHA02792 ankyrin-like protein; 99.9 4.9E-25 1.1E-29 221.3 18.9 234 5-252 102-478 (631)
42 PLN03192 Voltage-dependent pot 99.9 1.4E-24 2.9E-29 233.8 21.8 172 43-231 525-697 (823)
43 PHA02730 ankyrin-like protein; 99.9 2.4E-24 5.2E-29 218.6 21.9 194 3-205 36-258 (672)
44 PF13962 PGG: Domain of unknow 99.9 1.7E-25 3.6E-30 180.3 8.6 101 299-414 1-113 (113)
45 KOG0502 Integral membrane anky 99.9 1.1E-24 2.5E-29 185.0 9.8 224 5-251 59-282 (296)
46 KOG0507 CASK-interacting adapt 99.9 2.6E-24 5.6E-29 212.3 12.7 223 5-246 46-276 (854)
47 PLN03192 Voltage-dependent pot 99.9 2E-23 4.4E-28 224.8 19.6 176 6-194 523-699 (823)
48 KOG0507 CASK-interacting adapt 99.9 6.8E-24 1.5E-28 209.4 13.9 232 8-253 3-247 (854)
49 PHA02792 ankyrin-like protein; 99.9 1.5E-22 3.2E-27 203.5 20.2 242 7-276 70-450 (631)
50 KOG0505 Myosin phosphatase, re 99.9 2.5E-23 5.5E-28 198.9 13.0 205 10-231 42-272 (527)
51 KOG0502 Integral membrane anky 99.9 4.7E-24 1E-28 181.3 7.0 205 4-228 92-296 (296)
52 TIGR00870 trp transient-recept 99.9 1.8E-22 3.9E-27 216.1 18.4 214 3-230 47-297 (743)
53 KOG0514 Ankyrin repeat protein 99.9 5.2E-22 1.1E-26 180.8 11.4 164 70-250 261-430 (452)
54 PHA02743 Viral ankyrin protein 99.9 4E-21 8.6E-26 166.9 14.0 140 71-224 14-162 (166)
55 PHA02743 Viral ankyrin protein 99.8 1.7E-20 3.7E-25 162.9 14.2 136 42-185 19-162 (166)
56 PHA02741 hypothetical protein; 99.8 1.6E-20 3.5E-25 163.8 13.7 129 72-208 16-156 (169)
57 PHA02741 hypothetical protein; 99.8 2.5E-20 5.5E-25 162.6 14.6 132 105-252 15-157 (169)
58 PHA02884 ankyrin repeat protei 99.8 1E-19 2.3E-24 170.2 16.3 149 43-208 33-186 (300)
59 KOG0512 Fetal globin-inducing 99.8 5.3E-20 1.1E-24 151.1 11.9 140 80-231 66-206 (228)
60 PHA02884 ankyrin repeat protei 99.8 1.5E-19 3.2E-24 169.2 16.0 156 71-252 26-187 (300)
61 KOG0505 Myosin phosphatase, re 99.8 3.9E-20 8.4E-25 177.2 12.1 212 45-278 42-273 (527)
62 PHA02736 Viral ankyrin protein 99.8 3.6E-20 7.8E-25 159.2 10.4 130 70-208 10-150 (154)
63 KOG0514 Ankyrin repeat protein 99.8 5.3E-20 1.2E-24 167.8 11.3 161 40-207 265-430 (452)
64 PHA02736 Viral ankyrin protein 99.8 1.3E-19 2.9E-24 155.7 11.1 128 41-171 15-152 (154)
65 KOG0512 Fetal globin-inducing 99.8 7.4E-19 1.6E-23 144.4 13.0 142 46-195 66-209 (228)
66 KOG0195 Integrin-linked kinase 99.8 2E-19 4.4E-24 159.1 7.7 152 85-253 8-159 (448)
67 KOG3676 Ca2+-permeable cation 99.8 1.3E-17 2.8E-22 167.5 19.2 191 10-206 103-330 (782)
68 KOG4369 RTK signaling protein 99.8 4.3E-19 9.4E-24 180.7 7.3 231 6-255 755-987 (2131)
69 KOG4369 RTK signaling protein 99.7 3.4E-18 7.4E-23 174.3 6.2 239 3-254 785-1054(2131)
70 KOG0195 Integrin-linked kinase 99.7 6.9E-18 1.5E-22 149.5 5.8 133 16-152 8-140 (448)
71 KOG3676 Ca2+-permeable cation 99.7 2.1E-16 4.5E-21 158.9 15.7 163 2-167 137-330 (782)
72 cd00204 ANK ankyrin repeats; 99.7 4.3E-16 9.3E-21 128.1 13.7 122 74-203 4-125 (126)
73 PF12796 Ank_2: Ankyrin repeat 99.7 1.8E-16 3.9E-21 122.7 10.2 83 115-208 1-83 (89)
74 PF12796 Ank_2: Ankyrin repeat 99.7 7.5E-16 1.6E-20 119.2 10.8 85 12-103 1-85 (89)
75 cd00204 ANK ankyrin repeats; 99.7 2.4E-15 5.2E-20 123.7 14.0 121 42-165 6-126 (126)
76 COG0666 Arp FOG: Ankyrin repea 99.6 1.7E-13 3.8E-18 124.9 17.0 131 70-207 66-203 (235)
77 KOG4214 Myotrophin and similar 99.5 4E-14 8.7E-19 104.2 8.9 103 114-230 5-107 (117)
78 KOG4214 Myotrophin and similar 99.5 8.9E-14 1.9E-18 102.4 8.9 103 9-116 3-105 (117)
79 COG0666 Arp FOG: Ankyrin repea 99.5 9.1E-13 2E-17 120.2 17.3 132 105-250 67-203 (235)
80 KOG1710 MYND Zn-finger and ank 99.4 1.6E-12 3.5E-17 115.6 11.2 124 7-133 11-134 (396)
81 KOG0515 p53-interacting protei 99.4 1.3E-12 2.9E-17 124.9 10.0 117 47-166 554-673 (752)
82 KOG0515 p53-interacting protei 99.4 1.4E-12 3E-17 124.7 8.8 119 116-248 555-673 (752)
83 PTZ00322 6-phosphofructo-2-kin 99.4 2.3E-12 5E-17 135.5 11.4 86 114-206 85-170 (664)
84 PF13637 Ank_4: Ankyrin repeat 99.4 1.9E-12 4.1E-17 89.7 6.4 54 145-204 1-54 (54)
85 PF13637 Ank_4: Ankyrin repeat 99.4 2.2E-12 4.8E-17 89.3 6.7 52 44-96 2-53 (54)
86 PF13857 Ank_5: Ankyrin repeat 99.3 8.2E-13 1.8E-17 92.0 4.3 48 177-230 9-56 (56)
87 PTZ00322 6-phosphofructo-2-kin 99.3 6.8E-12 1.5E-16 132.0 11.7 86 80-167 85-170 (664)
88 KOG1710 MYND Zn-finger and ank 99.3 1.6E-11 3.4E-16 109.4 11.0 123 43-167 12-134 (396)
89 PF13857 Ank_5: Ankyrin repeat 99.3 2.6E-12 5.6E-17 89.5 4.1 55 131-191 2-56 (56)
90 KOG0782 Predicted diacylglycer 98.9 5.2E-09 1.1E-13 101.3 9.7 122 9-133 867-989 (1004)
91 KOG0783 Uncharacterized conser 98.8 1.9E-09 4E-14 108.7 4.3 86 133-230 40-126 (1267)
92 KOG0506 Glutaminase (contains 98.8 5.6E-09 1.2E-13 99.2 5.4 92 75-167 504-595 (622)
93 KOG0783 Uncharacterized conser 98.7 1.2E-08 2.6E-13 103.1 4.7 102 18-120 27-128 (1267)
94 KOG0782 Predicted diacylglycer 98.6 1E-07 2.3E-12 92.5 9.1 119 81-206 870-989 (1004)
95 PF13606 Ank_3: Ankyrin repeat 98.6 7.2E-08 1.6E-12 57.3 3.6 26 183-208 1-26 (30)
96 PF00023 Ank: Ankyrin repeat H 98.6 8.8E-08 1.9E-12 58.6 4.0 33 183-221 1-33 (33)
97 KOG0522 Ankyrin repeat protein 98.6 1.2E-07 2.6E-12 91.9 6.8 90 10-100 22-111 (560)
98 KOG0506 Glutaminase (contains 98.6 6.8E-08 1.5E-12 92.0 5.0 95 107-207 502-596 (622)
99 KOG0818 GTPase-activating prot 98.6 2.1E-07 4.6E-12 89.1 8.2 86 148-249 136-222 (669)
100 KOG0705 GTPase-activating prot 98.5 4.4E-07 9.6E-12 88.6 8.9 96 148-255 627-722 (749)
101 KOG0522 Ankyrin repeat protein 98.5 3E-07 6.5E-12 89.2 7.5 90 45-135 22-112 (560)
102 PF13606 Ank_3: Ankyrin repeat 98.4 2.6E-07 5.6E-12 54.9 3.5 27 77-103 2-28 (30)
103 KOG0818 GTPase-activating prot 98.4 1E-06 2.2E-11 84.6 8.8 86 46-132 136-221 (669)
104 PF00023 Ank: Ankyrin repeat H 98.4 5.5E-07 1.2E-11 55.0 4.0 27 77-103 2-28 (33)
105 KOG0705 GTPase-activating prot 98.3 2.6E-06 5.7E-11 83.3 8.6 89 11-100 627-717 (749)
106 KOG3609 Receptor-activated Ca2 98.2 5.4E-06 1.2E-10 85.3 9.6 124 6-138 23-157 (822)
107 KOG0520 Uncharacterized conser 98.1 2.5E-06 5.5E-11 89.4 4.8 133 106-249 569-702 (975)
108 KOG3609 Receptor-activated Ca2 98.1 8.6E-06 1.9E-10 83.8 8.4 128 44-209 26-156 (822)
109 KOG0521 Putative GTPase activa 98.1 3E-06 6.6E-11 89.3 4.9 79 143-233 654-732 (785)
110 KOG0520 Uncharacterized conser 98.0 5.1E-06 1.1E-10 87.2 4.7 134 71-206 568-702 (975)
111 KOG0511 Ankyrin repeat protein 97.9 5.1E-05 1.1E-09 70.9 8.8 74 45-121 38-111 (516)
112 KOG0511 Ankyrin repeat protein 97.9 4E-05 8.7E-10 71.6 7.6 124 112-253 37-162 (516)
113 KOG0521 Putative GTPase activa 97.8 3.8E-05 8.3E-10 81.2 6.0 88 75-164 654-741 (785)
114 KOG2384 Major histocompatibili 97.6 0.00014 3E-09 61.8 6.3 65 70-134 5-69 (223)
115 KOG2384 Major histocompatibili 97.6 0.00015 3.2E-09 61.6 6.0 64 137-206 4-68 (223)
116 KOG2505 Ankyrin repeat protein 96.8 0.0025 5.3E-08 62.1 6.0 80 156-248 402-481 (591)
117 smart00248 ANK ankyrin repeats 96.3 0.0071 1.5E-07 34.2 3.6 25 77-101 2-26 (30)
118 smart00248 ANK ankyrin repeats 96.2 0.0088 1.9E-07 33.8 3.7 26 183-208 1-26 (30)
119 PF06128 Shigella_OspC: Shigel 94.5 0.25 5.3E-06 43.8 8.4 121 114-254 156-281 (284)
120 KOG2505 Ankyrin repeat protein 94.5 0.073 1.6E-06 52.2 5.6 63 56-119 404-471 (591)
121 PF03158 DUF249: Multigene fam 94.0 0.78 1.7E-05 39.5 10.2 44 149-204 147-190 (192)
122 PF03158 DUF249: Multigene fam 93.4 1 2.2E-05 38.8 9.9 139 8-165 46-190 (192)
123 PF06128 Shigella_OspC: Shigel 91.3 1 2.2E-05 40.0 7.6 125 45-210 155-280 (284)
124 PF11929 DUF3447: Domain of un 89.3 0.69 1.5E-05 34.0 4.3 48 44-99 7-54 (76)
125 PF11929 DUF3447: Domain of un 89.2 0.9 1.9E-05 33.4 4.8 48 79-134 8-55 (76)
126 COG4298 Uncharacterized protei 79.6 5.9 0.00013 29.1 5.1 47 367-414 15-61 (95)
127 PF08114 PMP1_2: ATPase proteo 72.2 10 0.00022 23.7 3.9 37 412-448 3-39 (43)
128 cd07920 Pumilio Pumilio-family 70.2 53 0.0012 31.3 11.0 224 4-233 17-247 (322)
129 PF05393 Hum_adeno_E3A: Human 63.6 15 0.00032 27.4 4.1 26 430-455 43-68 (94)
130 PF04053 Coatomer_WDAD: Coatom 57.6 22 0.00047 35.9 5.7 162 11-208 267-430 (443)
131 PF01102 Glycophorin_A: Glycop 54.0 19 0.00042 29.0 3.7 21 432-452 79-99 (122)
132 KOG4591 Uncharacterized conser 53.9 8.3 0.00018 33.6 1.7 46 145-192 222-268 (280)
133 PF05313 Pox_P21: Poxvirus P21 52.3 55 0.0012 28.2 6.3 17 402-418 97-113 (189)
134 cd07920 Pumilio Pumilio-family 50.7 2.3E+02 0.0049 26.9 13.0 241 5-249 54-305 (322)
135 KOG4812 Golgi-associated prote 50.3 25 0.00053 31.7 4.1 22 364-385 166-187 (262)
136 KOG3614 Ca2+/Mg2+-permeable ca 50.1 4.3E+02 0.0093 30.6 14.1 24 148-171 566-589 (1381)
137 PF10754 DUF2569: Protein of u 48.5 1.5E+02 0.0033 24.8 8.6 22 428-449 125-146 (149)
138 PTZ00370 STEVOR; Provisional 45.6 8.9 0.00019 35.5 0.7 17 307-323 177-193 (296)
139 KOG3817 Uncharacterized conser 44.3 66 0.0014 30.9 6.1 17 373-389 169-185 (452)
140 COG5522 Predicted integral mem 44.0 2.3E+02 0.005 25.2 9.1 47 317-389 104-150 (236)
141 PF11990 DUF3487: Protein of u 43.7 44 0.00095 27.0 4.3 6 432-437 63-68 (121)
142 TIGR03750 conj_TIGR03750 conju 43.1 50 0.0011 26.2 4.4 22 429-450 57-78 (111)
143 PF05297 Herpes_LMP1: Herpesvi 43.1 8 0.00017 35.6 0.0 7 364-370 37-43 (381)
144 PF13210 DUF4018: Domain of un 42.2 1.5E+02 0.0032 25.1 7.1 45 385-429 64-108 (192)
145 KOG4335 FERM domain-containing 40.6 23 0.00049 35.6 2.6 71 49-119 149-219 (558)
146 KOG0513 Ca2+-independent phosp 38.6 10 0.00023 38.6 0.0 68 143-231 134-201 (503)
147 PF10710 DUF2512: Protein of u 36.9 2.4E+02 0.0052 23.3 8.2 33 386-418 24-56 (136)
148 PF10011 DUF2254: Predicted me 36.6 1.5E+02 0.0032 29.2 7.8 18 428-445 133-150 (371)
149 KOG0513 Ca2+-independent phosp 35.5 7.9 0.00017 39.5 -1.3 47 77-124 136-182 (503)
150 PRK10714 undecaprenyl phosphat 35.0 2.3E+02 0.005 27.2 8.7 27 386-412 225-251 (325)
151 COG2322 Predicted membrane pro 32.0 3.3E+02 0.0071 23.3 10.4 24 306-329 11-34 (177)
152 PF10943 DUF2632: Protein of u 31.7 1.7E+02 0.0036 24.2 5.9 18 394-411 70-87 (233)
153 PLN00151 potassium transporter 31.4 2.2E+02 0.0047 31.2 8.2 52 386-437 520-573 (852)
154 PF10329 DUF2417: Region of un 29.5 4.4E+02 0.0095 24.0 9.1 23 396-418 77-99 (232)
155 PF04633 Herpes_BMRF2: Herpesv 29.5 3.8E+02 0.0082 26.0 8.7 18 438-455 309-326 (349)
156 PLN00149 potassium transporter 29.2 2.3E+02 0.0051 30.7 8.0 52 386-437 447-500 (779)
157 PLN00148 potassium transporter 29.2 3.3E+02 0.0072 29.7 9.1 51 386-436 443-495 (785)
158 PF02060 ISK_Channel: Slow vol 28.9 1.3E+02 0.0029 24.3 4.7 31 421-451 46-76 (129)
159 KOG0292 Vesicle coat complex C 28.3 3.7E+02 0.008 29.7 9.0 102 46-170 599-700 (1202)
160 PLN03081 pentatricopeptide (PP 27.8 7.9E+02 0.017 26.4 12.6 22 185-206 498-519 (697)
161 COG4818 Predicted membrane pro 27.7 1.3E+02 0.0029 22.9 4.3 6 399-404 74-79 (105)
162 PHA00094 VI minor coat protein 27.5 2.7E+02 0.0059 21.9 6.0 63 352-419 5-69 (112)
163 PF03904 DUF334: Domain of unk 27.1 3.6E+02 0.0078 24.3 7.6 29 369-398 152-180 (230)
164 PLN00150 potassium ion transpo 26.7 2.6E+02 0.0056 30.4 7.8 52 386-437 460-513 (779)
165 TIGR02184 Myco_arth_vir_N Myco 26.1 40 0.00087 20.1 1.0 22 304-325 9-30 (33)
166 KOG4591 Uncharacterized conser 25.6 42 0.00091 29.4 1.5 50 107-156 218-271 (280)
167 PF10852 DUF2651: Protein of u 25.1 1.7E+02 0.0036 21.7 4.3 17 367-383 7-23 (82)
168 PF04053 Coatomer_WDAD: Coatom 25.0 1.8E+02 0.0039 29.5 6.2 108 44-170 322-431 (443)
169 PF12036 DUF3522: Protein of u 24.6 4.7E+02 0.01 22.8 8.1 60 305-391 31-90 (186)
170 PHA02688 ORF059 IMV protein VP 24.6 70 0.0015 30.3 2.9 47 362-408 276-322 (323)
171 COG1230 CzcD Co/Zn/Cd efflux s 24.5 3.9E+02 0.0085 25.4 7.9 76 369-444 57-147 (296)
172 PLN03081 pentatricopeptide (PP 24.3 9.1E+02 0.02 25.9 12.5 51 115-167 469-519 (697)
173 KOG3788 Predicted divalent cat 23.8 4.1E+02 0.0089 26.3 7.9 24 309-332 118-141 (441)
174 PF08898 DUF1843: Domain of un 23.4 83 0.0018 21.1 2.3 21 11-31 6-26 (53)
175 PF03669 UPF0139: Uncharacteri 23.1 3.7E+02 0.008 21.0 7.3 37 369-410 33-69 (103)
176 PLN03218 maturation of RBCL 1; 23.0 2.3E+02 0.0051 32.3 7.1 19 11-29 548-566 (1060)
177 PF00558 Vpu: Vpu protein; In 22.5 1.2E+02 0.0026 22.5 3.2 21 425-445 12-32 (81)
178 COG4325 Predicted membrane pro 22.0 3.3E+02 0.0071 26.8 6.8 16 372-387 92-107 (464)
179 COG3630 OadG Na+-transporting 21.8 2.5E+02 0.0055 20.9 4.7 26 429-454 20-45 (84)
180 COG3201 PnuC Nicotinamide mono 21.7 6E+02 0.013 22.9 9.0 105 304-452 113-220 (222)
181 PHA02902 putative IMV membrane 21.5 1.5E+02 0.0033 20.7 3.3 24 422-445 6-29 (70)
182 PF05568 ASFV_J13L: African sw 21.3 1.5E+02 0.0033 24.4 3.8 28 421-448 32-59 (189)
183 PF11241 DUF3043: Protein of u 21.1 3.2E+02 0.0069 23.6 6.0 11 398-408 84-94 (170)
184 PF03419 Peptidase_U4: Sporula 20.8 3.1E+02 0.0067 25.9 6.7 21 376-396 65-85 (293)
185 PF11364 DUF3165: Protein of u 20.0 2.3E+02 0.005 20.9 4.1 21 389-409 49-69 (81)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-38 Score=260.37 Aligned_cols=209 Identities=26% Similarity=0.363 Sum_probs=192.6
Q ss_pred cCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHc
Q 012836 8 MDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASAN 87 (455)
Q Consensus 8 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 87 (455)
+.++.+.+++......++.++++.+..+....+.+|+||||+||..|+.+++++|++.....++..|+.||||||.||..
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~ 82 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN 82 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence 34678889999999999999999997777776667999999999999999999999755444677799999999999999
Q ss_pred CCHHHHHHHHhc-CccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHH
Q 012836 88 GQIDVVRGLMKF-DQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVD 166 (455)
Q Consensus 88 g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 166 (455)
|+.++|+.|+.+ ++++ +..++.|.||||+|+..|+.+++++|+++ |+.++.+|..|.||||-|+.-|..+++++|+.
T Consensus 83 g~~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~kD~~~qtplHRAAavGklkvie~Li~ 160 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIKDKQGQTPLHRAAAVGKLKVIEYLIS 160 (226)
T ss_pred CcHHHHHHHhcCCCCCc-ceecCCCcceehhhhcCChhhHHHHHHhc-CCCCcccccccCchhHHHHhccchhhHHHHHh
Confidence 999999999999 7777 88999999999999999999999999998 89999999999999999999999999999999
Q ss_pred HhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHh
Q 012836 167 WIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLL 231 (455)
Q Consensus 167 ~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~ 231 (455)
.|+.. |..|..|+||||.|...|+.++..+|+++|+ +++..|++| ||+.++.
T Consensus 161 ~~a~~------n~qDk~G~TpL~~al~e~~~d~a~lLV~~gA------d~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 161 QGAPL------NTQDKYGFTPLHHALAEGHPDVAVLLVRAGA------DTDREDKEG-TALRIAC 212 (226)
T ss_pred cCCCC------CcccccCccHHHHHHhccCchHHHHHHHhcc------ceeeccccC-chHHHHH
Confidence 88776 9999999999999988899999999999999 899999998 9998873
No 2
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=282.28 Aligned_cols=220 Identities=19% Similarity=0.237 Sum_probs=194.1
Q ss_pred ccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHH
Q 012836 3 SYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMH 82 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 82 (455)
..|..|.||||.|+..|+.++++.|++.+...... .+.||||+|+..|+.++++.|++.+.+ .+..|..|+||||
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~----d~~TpLh~Aa~~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh 99 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGMD-DSQFDDKGNTALY 99 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC----CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 45778999999999999999999999988755332 378999999999999999999999987 5778999999999
Q ss_pred HHHHcCCHHHHHHHHhcCccccccCCCCC-CCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHH
Q 012836 83 MASANGQIDVVRGLMKFDQKLCHLQGPER-KTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVV 161 (455)
Q Consensus 83 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v 161 (455)
+|+..|+.+++++|++.++++ +.++..| .||||+|+..|+.+++++|+++.+...+. ..|.||||+|++.|+.+++
T Consensus 100 ~Aa~~g~~eivk~Ll~~gadi-n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~--~~g~TpLh~Aa~~g~~eiv 176 (284)
T PHA02791 100 YAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMM 176 (284)
T ss_pred HHHHcCCHHHHHHHHHCCCCc-CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccccc--ccCccHHHHHHHcCCHHHH
Confidence 999999999999999999998 6677777 48999999999999999999974432211 3589999999999999999
Q ss_pred HHHHHHhhhhcccccccccCCCCCcH-HHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCch
Q 012836 162 RALVDWIRDVKKENILNMKDKQGNTA-LHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDR 240 (455)
Q Consensus 162 ~~Ll~~g~~~~~~~~~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~ 240 (455)
++|+++|+++ |.+|..|.|| ||+|+..|+.+++++|+++|+ +++.+|.+| ++| +..
T Consensus 177 ~lLL~~gAd~------n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga------~in~~~~~~-~~l----------~~~ 233 (284)
T PHA02791 177 ILLLDYMTST------NTNNSLLFIPDIKLAIDNKDLEMLQALFKYDI------NIYSVNLEN-VLL----------DDA 233 (284)
T ss_pred HHHHHCCCCC------CcccCCCCChHHHHHHHcCCHHHHHHHHHCCC------CCccCcccC-ccC----------CCH
Confidence 9999999987 8899999987 999999999999999999999 889999854 666 456
Q ss_pred hHHHHHHHhcccc
Q 012836 241 EIEEIFWSAGAMR 253 (455)
Q Consensus 241 ~i~~~L~~~ga~~ 253 (455)
|++++|+++.++-
T Consensus 234 e~~~~ll~~~~~~ 246 (284)
T PHA02791 234 EIAKMIIEKHVEY 246 (284)
T ss_pred HHHHHHHHhhhhh
Confidence 8999999988754
No 3
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-34 Score=288.51 Aligned_cols=227 Identities=21% Similarity=0.255 Sum_probs=206.4
Q ss_pred cCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHc
Q 012836 8 MDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASAN 87 (455)
Q Consensus 8 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 87 (455)
.+++||.|+..|+.+.++.|++.+.+..... ..|.||||+|+..|+.+++++|++++.+ .+..+..|.||||.|+..
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~--~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~~ 78 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEI--YDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVEE 78 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccC--CCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHHC
Confidence 3689999999999999999999987665432 3599999999999999999999999986 456678899999999999
Q ss_pred CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHH
Q 012836 88 GQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDW 167 (455)
Q Consensus 88 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 167 (455)
|+.+++++|++.++......+.+|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|+++
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ 157 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH 157 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999999887667788899999999999999999999998 899999999999999999999999999999999
Q ss_pred hhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCC-CHHHHHhhCCCCcCchhHHHHH
Q 012836 168 IRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGL-TALDVLLSFPSEAGDREIEEIF 246 (455)
Q Consensus 168 g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~-t~l~~a~~~~~~~~~~~i~~~L 246 (455)
|+++ +.+|..|+||||+|+..|+.+++++|+++|+ +++..+..|. ||+++|+. .++.+++++|
T Consensus 158 g~~~------~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga------~~n~~~~~~~~t~l~~A~~----~~~~~iv~~L 221 (413)
T PHA02875 158 KACL------DIEDCCGCTPLIIAMAKGDIAICKMLLDSGA------NIDYFGKNGCVAALCYAIE----NNKIDIVRLF 221 (413)
T ss_pred CCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC------CCCcCCCCCCchHHHHHHH----cCCHHHHHHH
Confidence 8886 8899999999999999999999999999999 7888888875 78998864 4788999999
Q ss_pred HHhccccc
Q 012836 247 WSAGAMRM 254 (455)
Q Consensus 247 ~~~ga~~~ 254 (455)
+++|++..
T Consensus 222 l~~gad~n 229 (413)
T PHA02875 222 IKRGADCN 229 (413)
T ss_pred HHCCcCcc
Confidence 99999654
No 4
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=286.26 Aligned_cols=243 Identities=22% Similarity=0.298 Sum_probs=181.5
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcc--------------
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDF-------------- 69 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-------------- 69 (455)
.++.+.||||.|+..|+.++++.|++.+.+.... ...|.||||.|+..|+.+++++|++++.+.
T Consensus 31 ~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~--~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~ 108 (434)
T PHA02874 31 SVDETTTPLIDAIRSGDAKIVELFIKHGADINHI--NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIK 108 (434)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHH
Confidence 4556778888888888888888888877665432 234778888888888888888888776432
Q ss_pred --------hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCcccccc
Q 012836 70 --------AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDV 141 (455)
Q Consensus 70 --------~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 141 (455)
.+..|..|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++. |.+++..
T Consensus 109 ~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-g~~~n~~ 186 (434)
T PHA02874 109 TILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEK-GAYANVK 186 (434)
T ss_pred HHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCC
Confidence 2345677888888888888888888888888777 67778888888888888888888888876 7777777
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCC
Q 012836 142 SVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNH 221 (455)
Q Consensus 142 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~ 221 (455)
+..|+||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..+. +.+++|+ .|+ +++.+|.
T Consensus 187 ~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i------~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~------~in~~d~ 252 (434)
T PHA02874 187 DNNGESPLHNAAEYGDYACIKLLIDHGNHI------MNKCKNGFTPLHNAIIHNR-SAIELLI-NNA------SINDQDI 252 (434)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC------cCCCCCCCCHHHHHHHCCh-HHHHHHH-cCC------CCCCcCC
Confidence 888888888888888888888888877765 6677778888888877654 4555555 455 6788888
Q ss_pred CCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCccccc
Q 012836 222 SGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNC 276 (455)
Q Consensus 222 ~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (455)
.|.||||+|+.. ....+++++|+++|+.. +.++..|.+|+...
T Consensus 253 ~G~TpLh~A~~~---~~~~~iv~~Ll~~gad~---------n~~d~~g~TpL~~A 295 (434)
T PHA02874 253 DGSTPLHHAINP---PCDIDIIDILLYHKADI---------SIKDNKGENPIDTA 295 (434)
T ss_pred CCCCHHHHHHhc---CCcHHHHHHHHHCcCCC---------CCCCCCCCCHHHHH
Confidence 999999998642 24678999999998854 33445666665443
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-35 Score=242.82 Aligned_cols=196 Identities=28% Similarity=0.363 Sum_probs=175.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCC-cchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHh
Q 012836 43 AGNPLHVASAYGHVDFVKEIIRLKP-DFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK 121 (455)
Q Consensus 43 g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 121 (455)
+.++.+.+|......-++++++..+ ++..+.|.+|+||||+||+.|+.+++.+|++.-....+-+|..|+||||+||..
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~ 82 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN 82 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence 4678888899888889999999988 444444559999999999999999999999644444477899999999999999
Q ss_pred CCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHH
Q 012836 122 GRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVE 201 (455)
Q Consensus 122 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~ 201 (455)
|+.|+|+.|+.+.+.+++..++.|+|+||||+..|+.++.++|+++|+.+ +.+|..|.||||-|+..|+.++++
T Consensus 83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i------~~kD~~~qtplHRAAavGklkvie 156 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI------RIKDKQGQTPLHRAAAVGKLKVIE 156 (226)
T ss_pred CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC------cccccccCchhHHHHhccchhhHH
Confidence 99999999999999999999999999999999999999999999999877 999999999999999999999999
Q ss_pred HHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccccc
Q 012836 202 LLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRM 254 (455)
Q Consensus 202 ~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~ 254 (455)
+|+..|+ .+|..|+.|+||||.|. ..++.+...+|.++||.-.
T Consensus 157 ~Li~~~a------~~n~qDk~G~TpL~~al----~e~~~d~a~lLV~~gAd~~ 199 (226)
T KOG4412|consen 157 YLISQGA------PLNTQDKYGFTPLHHAL----AEGHPDVAVLLVRAGADTD 199 (226)
T ss_pred HHHhcCC------CCCcccccCccHHHHHH----hccCchHHHHHHHhcccee
Confidence 9999998 89999999999999993 2357788889999998543
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=260.60 Aligned_cols=210 Identities=16% Similarity=0.079 Sum_probs=184.7
Q ss_pred cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHH
Q 012836 18 TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLM 97 (455)
Q Consensus 18 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 97 (455)
.++.++++.|++.++.. .+..|.||||+|+..|+.++++.|++.+++. +.. +|.||||+|+..|+.+++++|+
T Consensus 9 ~~~~~~~~~Lis~~a~~----~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~~eiV~lLL 81 (284)
T PHA02791 9 WKSKQLKSFLSSKDAFK----ADVHGHSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILL 81 (284)
T ss_pred cCHHHHHHHHHhCCCCC----CCCCCCcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCCHHHHHHHH
Confidence 46788999999877632 2345999999999999999999999998763 332 4799999999999999999999
Q ss_pred hcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCC-cHHHHHHHcCCHHHHHHHHHHhhhhccccc
Q 012836 98 KFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRE-TVLHLAVKNNQFEVVRALVDWIRDVKKENI 176 (455)
Q Consensus 98 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~ 176 (455)
+.+++. +.+|..|+||||+|+..|+.++++.|++. +.+++..+..|+ ||||+|+..|+.+++++|++++.+.
T Consensus 82 ~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~----- 154 (284)
T PHA02791 82 FSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST----- 154 (284)
T ss_pred HCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc-----
Confidence 999988 88999999999999999999999999997 788888888884 8999999999999999999875432
Q ss_pred ccccC-CCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCH-HHHHhhCCCCcCchhHHHHHHHhccccc
Q 012836 177 LNMKD-KQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTA-LDVLLSFPSEAGDREIEEIFWSAGAMRM 254 (455)
Q Consensus 177 ~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~-l~~a~~~~~~~~~~~i~~~L~~~ga~~~ 254 (455)
.| ..|+||||+|+..|+.+++++|+++|+ +++.+|..|.|| ||+|+ ..++.+++++|+++|+...
T Consensus 155 ---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA------d~n~~d~~g~t~~L~~Aa----~~~~~e~v~lLl~~Ga~in 221 (284)
T PHA02791 155 ---FDLAILLSCIHITIKNGHVDMMILLLDYMT------STNTNNSLLFIPDIKLAI----DNKDLEMLQALFKYDINIY 221 (284)
T ss_pred ---cccccCccHHHHHHHcCCHHHHHHHHHCCC------CCCcccCCCCChHHHHHH----HcCCHHHHHHHHHCCCCCc
Confidence 23 358999999999999999999999999 789999999987 99996 4589999999999999653
No 7
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=285.79 Aligned_cols=232 Identities=20% Similarity=0.305 Sum_probs=156.1
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHH-----HHHcCCHHHHHHHHHcCCcchhhhcCCCCc
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHV-----ASAYGHVDFVKEIIRLKPDFAKEVNQDGFS 79 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~-----A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 79 (455)
+..+.||||.|+..|+.++++.|++++.+..... ..+.||||. |+..|+.++++.|++.++++ +..|..|.|
T Consensus 32 ~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~--~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~t 108 (480)
T PHA03100 32 YKKPVLPLYLAKEARNIDVVKILLDNGADINSST--KNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGIT 108 (480)
T ss_pred hcccchhhhhhhccCCHHHHHHHHHcCCCCCCcc--ccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCc
Confidence 4456677788877777777887777776554332 246777777 77777777777777777764 666777777
Q ss_pred HHHHHH--HcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC--CHHHHHHHHHhcCccccccccCCCcHHHHHHHc
Q 012836 80 PMHMAS--ANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG--RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKN 155 (455)
Q Consensus 80 pLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 155 (455)
|||+|+ ..|+.+++++|++.+++. +..+..|.||||.|+..| +.++++.|+++ |.+++..|..|.||||+|+..
T Consensus 109 pL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-g~din~~d~~g~tpL~~A~~~ 186 (480)
T PHA03100 109 PLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDK-GVDINAKNRYGYTPLHIAVEK 186 (480)
T ss_pred hhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHC-CCCcccccCCCCCHHHHHHHh
Confidence 777777 777777777777777776 666777777777777777 77777777776 666777777777777777777
Q ss_pred CCHHHHHHHHHHhhhhccc-----------------------------------ccccccCCCCCcHHHHHHhcCChHHH
Q 012836 156 NQFEVVRALVDWIRDVKKE-----------------------------------NILNMKDKQGNTALHLATWKRECQVV 200 (455)
Q Consensus 156 ~~~~~v~~Ll~~g~~~~~~-----------------------------------~~~~~~d~~G~T~Lh~A~~~~~~~iv 200 (455)
|+.+++++|+++|+++... ..++.+|..|+||||+|+..|+.+++
T Consensus 187 ~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv 266 (480)
T PHA03100 187 GNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFV 266 (480)
T ss_pred CCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 7777777777777665100 11245555566666666666666666
Q ss_pred HHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcc
Q 012836 201 ELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGA 251 (455)
Q Consensus 201 ~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga 251 (455)
++|+++|+ +++.+|..|.||+++|.. .+..+++++|+++|+
T Consensus 267 ~~Ll~~ga------d~n~~d~~g~tpl~~A~~----~~~~~iv~~Ll~~g~ 307 (480)
T PHA03100 267 KYLLDLGA------NPNLVNKYGDTPLHIAIL----NNNKEIFKLLLNNGP 307 (480)
T ss_pred HHHHHcCC------CCCccCCCCCcHHHHHHH----hCCHHHHHHHHhcCC
Confidence 66666655 555566666666666542 245556666666555
No 8
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=286.27 Aligned_cols=236 Identities=22% Similarity=0.350 Sum_probs=202.0
Q ss_pred cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHH-----HHHcCCHHH
Q 012836 18 TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHM-----ASANGQIDV 92 (455)
Q Consensus 18 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~-----Aa~~g~~~i 92 (455)
....+.++.+++++ ... ......+.||||.|+..|+.++|+.|+++|.+ ++..+..|.||||+ |+..|+.++
T Consensus 12 ~~~~~~~~~~~~~~-~~~-~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~-~~~~~~~~~t~L~~~~~~~a~~~~~~~i 88 (480)
T PHA03100 12 IIKVKNIKYIIMED-DLN-DYSYKKPVLPLYLAKEARNIDVVKILLDNGAD-INSSTKNNSTPLHYLSNIKYNLTDVKEI 88 (480)
T ss_pred HHHHHHHHHHHhcC-ccc-hhhhcccchhhhhhhccCCHHHHHHHHHcCCC-CCCccccCcCHHHHHHHHHHHhhchHHH
Confidence 34457788888654 222 23334589999999999999999999999987 56778899999999 999999999
Q ss_pred HHHHHhcCccccccCCCCCCCHHHHHH--HhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcC--CHHHHHHHHHHh
Q 012836 93 VRGLMKFDQKLCHLQGPERKTPLHFAA--IKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNN--QFEVVRALVDWI 168 (455)
Q Consensus 93 v~~Ll~~~~~~~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~g 168 (455)
+++|++.|+++ +..|..|.||||+|+ ..|+.+++++|++. |.+++..+..|.||||+|+..+ +.+++++|+++|
T Consensus 89 v~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g 166 (480)
T PHA03100 89 VKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDN-GANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG 166 (480)
T ss_pred HHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC
Confidence 99999999998 889999999999999 99999999999997 8899999999999999999999 999999999999
Q ss_pred hhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCC-----------------------------------CC
Q 012836 169 RDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANAS-----------------------------------GG 213 (455)
Q Consensus 169 ~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~-----------------------------------~~ 213 (455)
+++ +.+|..|+||||+|+..|+.+++++|+++|++.. .+
T Consensus 167 ~di------n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g 240 (480)
T PHA03100 167 VDI------NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG 240 (480)
T ss_pred CCc------ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC
Confidence 887 8888899999999999999999999988887643 12
Q ss_pred ccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCcccccc
Q 012836 214 LEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCI 277 (455)
Q Consensus 214 v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
.+++.+|..|.||||+|+. .++.+++++|+++|+.. ..++..|.+|+....
T Consensus 241 ~din~~d~~g~TpL~~A~~----~~~~~iv~~Ll~~gad~---------n~~d~~g~tpl~~A~ 291 (480)
T PHA03100 241 VPINIKDVYGFTPLHYAVY----NNNPEFVKYLLDLGANP---------NLVNKYGDTPLHIAI 291 (480)
T ss_pred CCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCC---------CccCCCCCcHHHHHH
Confidence 5778899999999999974 46789999999999843 334566777765544
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=273.58 Aligned_cols=239 Identities=22% Similarity=0.343 Sum_probs=205.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcC
Q 012836 9 DRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANG 88 (455)
Q Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g 88 (455)
...|+.|+..||++.++.|++.++....... ..|.||||.|+..|+.++|++|++.|++ .+..+..|.||||.|+..|
T Consensus 2 ~~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~-~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~~ 79 (434)
T PHA02874 2 SQDLRMCIYSGDIEAIEKIIKNKGNCINISV-DETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKIG 79 (434)
T ss_pred cHHHHHHHhcCCHHHHHHHHHcCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC
Confidence 3579999999999999999988776544333 3589999999999999999999999988 4677889999999999999
Q ss_pred CHHHHHHHHhcCccc----------------------cccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCC
Q 012836 89 QIDVVRGLMKFDQKL----------------------CHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRE 146 (455)
Q Consensus 89 ~~~iv~~Ll~~~~~~----------------------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 146 (455)
+.+++++|++.|++. .+.+|..|.||||+|+..|+.+++++|++. |.+++..|..|.
T Consensus 80 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-gad~n~~d~~g~ 158 (434)
T PHA02874 80 AHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY-GADVNIEDDNGC 158 (434)
T ss_pred CHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC-CCCCCCcCCCCC
Confidence 999999999887543 245788999999999999999999999997 889999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCH
Q 012836 147 TVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTA 226 (455)
Q Consensus 147 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~ 226 (455)
||||+|+..++.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|+ +++.++..|.||
T Consensus 159 tpLh~A~~~~~~~iv~~Ll~~g~~~------n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~------~i~~~~~~g~Tp 226 (434)
T PHA02874 159 YPIHIAIKHNFFDIIKLLLEKGAYA------NVKDNNGESPLHNAAEYGDYACIKLLIDHGN------HIMNKCKNGFTP 226 (434)
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC------CCcCCCCCCCCH
Confidence 9999999999999999999999886 8899999999999999999999999999998 788999999999
Q ss_pred HHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCcccccc
Q 012836 227 LDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCI 277 (455)
Q Consensus 227 l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
||.|+.. ..+.+++|+ .|+. .+.++..|.+|+....
T Consensus 227 L~~A~~~-----~~~~i~~Ll-~~~~---------in~~d~~G~TpLh~A~ 262 (434)
T PHA02874 227 LHNAIIH-----NRSAIELLI-NNAS---------INDQDIDGSTPLHHAI 262 (434)
T ss_pred HHHHHHC-----ChHHHHHHH-cCCC---------CCCcCCCCCCHHHHHH
Confidence 9999753 235566665 3442 2344566777765443
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-32 Score=278.66 Aligned_cols=239 Identities=22% Similarity=0.256 Sum_probs=198.5
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHH
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMA 84 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 84 (455)
+.-+.||||.|+..|+.++++.|++.+.+.... +..|.||||+||..|+.++++.|++.+.... ...+.+|+|.|
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~--d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~l~~a 108 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQP--DHRDLTPLHIICKEPNKLGMKEMIRSINKCS---VFYTLVAIKDA 108 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCccHhHHHHHHHHHhccc---cccchhhHHHH
Confidence 335678999999999999999999998766543 3469999999999999999999999865421 14678899999
Q ss_pred HHcCCHHHHH---------------------------------HHHhcCccccccCCCC-CCCHHHHHHHhCCHHHHHHH
Q 012836 85 SANGQIDVVR---------------------------------GLMKFDQKLCHLQGPE-RKTPLHFAAIKGRVDVVSEM 130 (455)
Q Consensus 85 a~~g~~~iv~---------------------------------~Ll~~~~~~~~~~d~~-g~tpLh~A~~~g~~~~v~~L 130 (455)
+..|+.++++ +|++.|+++ +.++.+ |.||||+|+..|+.++++.|
T Consensus 109 ~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadi-n~~~~~~g~tpLh~A~~~~~~~iv~~L 187 (477)
T PHA02878 109 FNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADI-NMKDRHKGNTALHYATENKDQRLTELL 187 (477)
T ss_pred HHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCC-CccCCCCCCCHHHHHHhCCCHHHHHHH
Confidence 9888766554 444455555 566777 99999999999999999999
Q ss_pred HHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhc-CChHHHHHHHhcCCC
Q 012836 131 LSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWK-RECQVVELLLSHGAN 209 (455)
Q Consensus 131 l~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~-~~~~iv~~Ll~~ga~ 209 (455)
++. |++++..|..|+||||+|+..++.+++++|++.|+++ +.+|..|+||||+|+.. ++.+++++|+++|+
T Consensus 188 l~~-gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i------n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~ga- 259 (477)
T PHA02878 188 LSY-GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST------DARDKCGNTPLHISVGYCKDYDILKLLLEHGV- 259 (477)
T ss_pred HHC-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC------CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCC-
Confidence 987 8889999999999999999999999999999999887 88999999999999975 68999999999998
Q ss_pred CCCCccccccCC-CCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCcccccc
Q 012836 210 ASGGLEVNATNH-SGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCI 277 (455)
Q Consensus 210 ~~~~v~~~~~n~-~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
+++.++. .|.||||+|. +..+++++|+++|+.. +..+..|.+|+....
T Consensus 260 -----dvn~~~~~~g~TpLh~A~------~~~~~v~~Ll~~gadi---------n~~d~~g~TpL~~A~ 308 (477)
T PHA02878 260 -----DVNAKSYILGLTALHSSI------KSERKLKLLLEYGADI---------NSLNSYKLTPLSSAV 308 (477)
T ss_pred -----CCCccCCCCCCCHHHHHc------cCHHHHHHHHHCCCCC---------CCcCCCCCCHHHHHH
Confidence 7888876 7999999993 4578899999999854 344566777755443
No 11
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.9e-32 Score=276.90 Aligned_cols=245 Identities=20% Similarity=0.203 Sum_probs=212.5
Q ss_pred ccCcccCHHHHHHHHcC---CHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC-CHHHHHHHHHcCCcchhhhcCCCC
Q 012836 3 SYSTRMDRRLIAAALTG---DVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG-HVDFVKEIIRLKPDFAKEVNQDGF 78 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~ 78 (455)
..+..|.||||.|+..| +.++++.|++.+.+...... .|.||||+|+..| +.++++.|++++.+ ++..|..|.
T Consensus 42 ~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~--~g~TpLh~A~~~~~~~~iv~lLl~~ga~-in~~~~~g~ 118 (471)
T PHA03095 42 FRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER--CGFTPLHLYLYNATTLDVIKLLIKAGAD-VNAKDKVGR 118 (471)
T ss_pred cCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCcHHHHHHHHHcCCC-CCCCCCCCC
Confidence 45677899999999998 99999999999987765443 6999999999999 59999999999988 577899999
Q ss_pred cHHHHHH--HcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC--CHHHHHHHHHhcCccccccccCCCcHHHHHHH
Q 012836 79 SPMHMAS--ANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG--RVDVVSEMLSAYGECAEDVSVQRETVLHLAVK 154 (455)
Q Consensus 79 tpLh~Aa--~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 154 (455)
||||+|+ ..++.+++++|++.|+++ +..|..|.||||+|+..+ +.++++.|++. |.+++..|..|+||||+|+.
T Consensus 119 tpLh~a~~~~~~~~~iv~~Ll~~gad~-~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~~d~~g~t~Lh~~~~ 196 (471)
T PHA03095 119 TPLHVYLSGFNINPKVIRLLLRKGADV-NALDLYGMTPLAVLLKSRNANVELLRLLIDA-GADVYAVDDRFRSLLHHHLQ 196 (471)
T ss_pred CHHHHHhhCCcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH
Confidence 9999999 566899999999999998 888999999999998876 68999999987 77888889999999999987
Q ss_pred c--CCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCCh--HHHHHHHhcCCCCCCCccccccCCCCCCHHHHH
Q 012836 155 N--NQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKREC--QVVELLLSHGANASGGLEVNATNHSGLTALDVL 230 (455)
Q Consensus 155 ~--~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~--~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a 230 (455)
. ++.++++.|++.|+++ +.+|..|+||||+|+..++. .+++.|++.|+ +++.+|..|+||||+|
T Consensus 197 ~~~~~~~i~~~Ll~~g~~~------~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~------din~~d~~g~TpLh~A 264 (471)
T PHA03095 197 SFKPRARIVRELIRAGCDP------AATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI------SINARNRYGQTPLHYA 264 (471)
T ss_pred HCCCcHHHHHHHHHcCCCC------cccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC------CCCCcCCCCCCHHHHH
Confidence 5 6789999999999887 88999999999999998875 67888999988 8999999999999999
Q ss_pred hhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCcccccc
Q 012836 231 LSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCI 277 (455)
Q Consensus 231 ~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
+. .++.+++++|+++||.. ...+..|.+|+....
T Consensus 265 ~~----~~~~~~v~~LL~~gad~---------n~~~~~g~tpl~~A~ 298 (471)
T PHA03095 265 AV----FNNPRACRRLIALGADI---------NAVSSDGNTPLSLMV 298 (471)
T ss_pred HH----cCCHHHHHHHHHcCCCC---------cccCCCCCCHHHHHH
Confidence 64 47889999999999954 334556777765443
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5e-32 Score=271.24 Aligned_cols=229 Identities=19% Similarity=0.267 Sum_probs=198.9
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHH
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHM 83 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 83 (455)
.+..|.||||.|+..|+.++++.|++.+...... ...+.||||.|+..|+.++++.|++.++......+.+|.||||+
T Consensus 31 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~ 108 (413)
T PHA02875 31 EIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK--YPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHL 108 (413)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc--CCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHH
Confidence 3557999999999999999999999988754332 23589999999999999999999999987666677889999999
Q ss_pred HHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHH
Q 012836 84 ASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRA 163 (455)
Q Consensus 84 Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~ 163 (455)
|+..|+.+++++|++.|+++ +.++.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++
T Consensus 109 A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~TpL~~A~~~g~~eiv~~ 186 (413)
T PHA02875 109 ATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGCTPLIIAMAKGDIAICKM 186 (413)
T ss_pred HHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999998 88899999999999999999999999997 88899999999999999999999999999
Q ss_pred HHHHhhhhcccccccccCCCC-CcHHHHHHhcCChHHHHHHHhcCCCCCCCccccc---cCCCCCCHHHHHhhCCCCcCc
Q 012836 164 LVDWIRDVKKENILNMKDKQG-NTALHLATWKRECQVVELLLSHGANASGGLEVNA---TNHSGLTALDVLLSFPSEAGD 239 (455)
Q Consensus 164 Ll~~g~~~~~~~~~~~~d~~G-~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~---~n~~g~t~l~~a~~~~~~~~~ 239 (455)
|+++|+++ +..+..| .||+|+|+..++.+++++|+++|+ +++. .+.++.||++++.... ....
T Consensus 187 Ll~~ga~~------n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~ga------d~n~~~~~~~~~~t~l~~~~~~~-~~~~ 253 (413)
T PHA02875 187 LLDSGANI------DYFGKNGCVAALCYAIENNKIDIVRLFIKRGA------DCNIMFMIEGEECTILDMICNMC-TNLE 253 (413)
T ss_pred HHhCCCCC------CcCCCCCCchHHHHHHHcCCHHHHHHHHHCCc------CcchHhhcCCCchHHHHHHHhhc-CCcc
Confidence 99999987 7777777 489999999999999999999999 4444 4778999999986442 2233
Q ss_pred hhHHHHHHHh
Q 012836 240 REIEEIFWSA 249 (455)
Q Consensus 240 ~~i~~~L~~~ 249 (455)
.+.++.+..+
T Consensus 254 ~~~~~~li~~ 263 (413)
T PHA02875 254 SEAIDALIAD 263 (413)
T ss_pred cHHHHHHHHH
Confidence 4455555433
No 13
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=5.3e-32 Score=270.84 Aligned_cols=233 Identities=15% Similarity=0.208 Sum_probs=144.1
Q ss_pred ccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCC--HHHHHHHHHcCCcchhhhcCCCCcH
Q 012836 3 SYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGH--VDFVKEIIRLKPDFAKEVNQDGFSP 80 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~g~tp 80 (455)
..+..|.||||.|+..|+.++++.|++.+.+.... +..|.||||+|+..++ .++++.|+++++++....|..|.||
T Consensus 67 ~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~--d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tp 144 (446)
T PHA02946 67 ETDDDGNYPLHIASKINNNRIVAMLLTHGADPNAC--DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGP 144 (446)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCC--CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcH
Confidence 34556667777777777777777777666554322 2346677776665543 5666677766666443456666777
Q ss_pred HHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC--CHHHHHHHHHhcCccccccccCCCcHHHHHHHcC--
Q 012836 81 MHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG--RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNN-- 156 (455)
Q Consensus 81 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~-- 156 (455)
|| ||..|+.+++++|++.+++. +.+|..|+||||.|+..+ +.+++++|++. |.+++..|.+|+||||+|+..+
T Consensus 145 L~-aa~~~~~~vv~~Ll~~gad~-~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~G~TpLH~Aa~~~~~ 221 (446)
T PHA02946 145 LL-ACTDPSERVFKKIMSIGFEA-RIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHDGNTPLHIVCSKTVK 221 (446)
T ss_pred HH-HHHCCChHHHHHHHhccccc-cccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCC
Confidence 75 55556667777777666665 666667777777766543 34667666665 6667777777777777777664
Q ss_pred CHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCC-hHHHHHHHhcCCCCCCCc--------------ccccc-C
Q 012836 157 QFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRE-CQVVELLLSHGANASGGL--------------EVNAT-N 220 (455)
Q Consensus 157 ~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~-~~iv~~Ll~~ga~~~~~v--------------~~~~~-n 220 (455)
+.+++++|++ |+++ |.+|..|+||||+|+..++ .+++++|+++|+...... .++.. +
T Consensus 222 ~~~iv~lLl~-gadi------n~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~ 294 (446)
T PHA02946 222 NVDIINLLLP-STDV------NKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGK 294 (446)
T ss_pred cHHHHHHHHc-CCCC------CCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCc
Confidence 5667776664 5554 6677777777777777666 366777777665211000 01111 1
Q ss_pred CCCCCHHHHHhhCCCCcCchhHHHHHHHhcc
Q 012836 221 HSGLTALDVLLSFPSEAGDREIEEIFWSAGA 251 (455)
Q Consensus 221 ~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga 251 (455)
..|.||||+|+ ..++.+++++|+++|+
T Consensus 295 ~~~~TpLh~Aa----~~g~~eivk~Ll~~~~ 321 (446)
T PHA02946 295 QYDSTDFKMAV----EVGSIRCVKYLLDNDI 321 (446)
T ss_pred ccCCCHHHHHH----HcCCHHHHHHHHHCCC
Confidence 24567777775 3467777777777664
No 14
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=9.4e-32 Score=261.71 Aligned_cols=206 Identities=28% Similarity=0.373 Sum_probs=185.5
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhc-CCCCcHHHHHHHcC
Q 012836 10 RRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVN-QDGFSPMHMASANG 88 (455)
Q Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpLh~Aa~~g 88 (455)
..++.|+++|+++.++.+++.........+ .+|.|+||+||.+++.+++++|++++++. +... .-|.||||+|+++|
T Consensus 46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D-~~g~tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 46 DDIVKATQYGELETVKELVESEGESVNNPD-REGVTLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhHhhcchHHHHHHHHhhcCcCCCCCC-cCCccceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHHHHcC
Confidence 457899999999999999998433333333 36999999999999999999999999984 5555 77899999999999
Q ss_pred CHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHh
Q 012836 89 QIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWI 168 (455)
Q Consensus 89 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 168 (455)
+..+|.+|+++|+++ ..+|.+|.+|||.|+..|+.-++-+|+.+ +.+++.+|.+|+||||+|+.+|....++.|++.|
T Consensus 124 ~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~-~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 124 HISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSK-GADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred cHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHh-cccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhc
Confidence 999999999999999 99999999999999999999999999999 6999999999999999999999988899999988
Q ss_pred hhhcccccccccC-CCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHh
Q 012836 169 RDVKKENILNMKD-KQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLL 231 (455)
Q Consensus 169 ~~~~~~~~~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~ 231 (455)
+.+ +.+| +.|+||||+|+..|+..++++|++.|+ +.+..|.+|+||+++|.
T Consensus 202 a~~------~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~------~~d~~~~~g~tp~~LA~ 253 (600)
T KOG0509|consen 202 ASL------LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGA------DLDKTNTNGKTPFDLAQ 253 (600)
T ss_pred ccc------cccccccCCchHHHHHhcCCcceEehhhhcCC------cccccccCCCCHHHHHH
Confidence 877 6666 999999999999999999996666666 78889999999999995
No 15
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=7.8e-32 Score=269.66 Aligned_cols=224 Identities=20% Similarity=0.229 Sum_probs=194.9
Q ss_pred cCHHHHHHHH--cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHH
Q 012836 8 MDRRLIAAAL--TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMAS 85 (455)
Q Consensus 8 ~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa 85 (455)
..+.||.++. .++.++++.|++.+.+..... ..|.||||+|+..|+.++++.|++++++ ++.+|.+|.||||+|+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d--~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~ 113 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETD--DDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLS 113 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccC--CCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHH
Confidence 3688998764 457899999999998765443 3599999999999999999999999988 5778999999999999
Q ss_pred HcCC--HHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCC--HHHH
Q 012836 86 ANGQ--IDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQ--FEVV 161 (455)
Q Consensus 86 ~~g~--~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~--~~~v 161 (455)
..++ .+++++|+++|+++....|.+|.|||| |+..|+.++++.|++. +.+++..|..|+||||+|+..++ .+++
T Consensus 114 ~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-gad~~~~d~~G~t~Lh~A~~~~~~~~~~v 191 (446)
T PHA02946 114 GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI-GFEARIVDKFGKNHIHRHLMSDNPKASTI 191 (446)
T ss_pred HcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc-cccccccCCCCCCHHHHHHHhcCCCHHHH
Confidence 8764 899999999999985567899999998 6777999999999987 89999999999999999987655 6899
Q ss_pred HHHHHHhhhhcccccccccCCCCCcHHHHHHhcC--ChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCc
Q 012836 162 RALVDWIRDVKKENILNMKDKQGNTALHLATWKR--ECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGD 239 (455)
Q Consensus 162 ~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~--~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~ 239 (455)
++|+++|+++ +.+|.+|+||||+|+..+ +.+++++|++ |+ +++.+|..|.||||+|+.. ...
T Consensus 192 ~~Ll~~Gadi------n~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga------din~~d~~G~TpLh~A~~~---~~~ 255 (446)
T PHA02946 192 SWMMKLGISP------SKPDHDGNTPLHIVCSKTVKNVDIINLLLP-ST------DVNKQNKFGDSPLTLLIKT---LSP 255 (446)
T ss_pred HHHHHcCCCC------cccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC------CCCCCCCCCCCHHHHHHHh---CCh
Confidence 9999999987 899999999999999876 7899999985 77 8999999999999999743 223
Q ss_pred hhHHHHHHHhccc
Q 012836 240 REIEEIFWSAGAM 252 (455)
Q Consensus 240 ~~i~~~L~~~ga~ 252 (455)
.+++++|+++|+.
T Consensus 256 ~~~~~~Ll~~g~~ 268 (446)
T PHA02946 256 AHLINKLLSTSNV 268 (446)
T ss_pred HHHHHHHHhCCCC
Confidence 5889999999874
No 16
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=9.6e-32 Score=274.01 Aligned_cols=231 Identities=16% Similarity=0.198 Sum_probs=206.0
Q ss_pred cccCcccCHHHHHHHHcC-CHHHHHHHHhcCCcccCCCCCCCCChHHHHHH--HcCCHHHHHHHHHcCCcchhhhcCCCC
Q 012836 2 TSYSTRMDRRLIAAALTG-DVQTLQQLFVENPLILHTPAFASAGNPLHVAS--AYGHVDFVKEIIRLKPDFAKEVNQDGF 78 (455)
Q Consensus 2 t~~~~~~~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 78 (455)
+..+..|.||||.|+..| +.++++.|++.+.+.... +..|.||||+|+ ..++.++++.|++++++ ++..|..|.
T Consensus 77 n~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~--~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad-~~~~d~~g~ 153 (471)
T PHA03095 77 NAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAK--DKVGRTPLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGM 153 (471)
T ss_pred CCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCC--CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC-CCccCCCCC
Confidence 345678999999999999 599999999998876543 235999999999 56789999999999988 577899999
Q ss_pred cHHHHHHHcC--CHHHHHHHHhcCccccccCCCCCCCHHHHHHHh--CCHHHHHHHHHhcCccccccccCCCcHHHHHHH
Q 012836 79 SPMHMASANG--QIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK--GRVDVVSEMLSAYGECAEDVSVQRETVLHLAVK 154 (455)
Q Consensus 79 tpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 154 (455)
||||+|+..+ +.+++++|++.+++. ...|..|.||||+|+.. ++.++++.|++. |.+++..|..|+||||+|+.
T Consensus 154 tpL~~a~~~~~~~~~iv~~Ll~~g~~~-~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d~~g~tpLh~Aa~ 231 (471)
T PHA03095 154 TPLAVLLKSRNANVELLRLLIDAGADV-YAVDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATDMLGNTPLHSMAT 231 (471)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHh
Confidence 9999998876 689999999999998 55599999999999975 788999999987 89999999999999999999
Q ss_pred cCCH--HHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhh
Q 012836 155 NNQF--EVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLS 232 (455)
Q Consensus 155 ~~~~--~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~ 232 (455)
.|+. .+++.+++.|.++ |.+|..|+||||+|+..|+.+++++|+++|+ +++.+|..|.|||++|+.
T Consensus 232 ~~~~~~~~v~~ll~~g~di------n~~d~~g~TpLh~A~~~~~~~~v~~LL~~ga------d~n~~~~~g~tpl~~A~~ 299 (471)
T PHA03095 232 GSSCKRSLVLPLLIAGISI------NARNRYGQTPLHYAAVFNNPRACRRLIALGA------DINAVSSDGNTPLSLMVR 299 (471)
T ss_pred cCCchHHHHHHHHHcCCCC------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCcccCCCCCCHHHHHHH
Confidence 9874 6888899988887 9999999999999999999999999999999 899999999999999964
Q ss_pred CCCCcCchhHHHHHHHhcccc
Q 012836 233 FPSEAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 233 ~~~~~~~~~i~~~L~~~ga~~ 253 (455)
.++.++++.|++.++..
T Consensus 300 ----~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 300 ----NNNGRAVRAALAKNPSA 316 (471)
T ss_pred ----hCCHHHHHHHHHhCCCH
Confidence 47889999999988754
No 17
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.1e-31 Score=276.88 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=171.1
Q ss_pred ccCcccCHHHHHHHHcCC--HHHHHHHHhcCCcccCCCCCCCCChHHHHH------------------------------
Q 012836 3 SYSTRMDRRLIAAALTGD--VQTLQQLFVENPLILHTPAFASAGNPLHVA------------------------------ 50 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A------------------------------ 50 (455)
..+..|.||||.|+..|+ .++++.|++.+++.... +..|.||||.|
T Consensus 207 ~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k--D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~ 284 (764)
T PHA02716 207 LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMK--CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMI 284 (764)
T ss_pred CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhh
Confidence 345667777777777774 47777777777665443 23477777754
Q ss_pred -------HHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHH--cCCHHHHHHHHhcCccccccCCCCCCCHHHHHHH-
Q 012836 51 -------SAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASA--NGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAI- 120 (455)
Q Consensus 51 -------~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~--~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~- 120 (455)
+..|+.++++.|++.+++ ++.+|..|+||||+|+. .++.+++++|++.|+++ +.+|..|+||||+|+.
T Consensus 285 L~~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 285 LHSYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSM 362 (764)
T ss_pred hHHHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHh
Confidence 334667777777777766 45667778888887654 35677888888877776 6777788888887764
Q ss_pred -------------hCCHHHHHHHHHhcCccccccccCCCcHHHHH----HHcCCHHHHHHHHHHhhhhc-----------
Q 012836 121 -------------KGRVDVVSEMLSAYGECAEDVSVQRETVLHLA----VKNNQFEVVRALVDWIRDVK----------- 172 (455)
Q Consensus 121 -------------~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A----~~~~~~~~v~~Ll~~g~~~~----------- 172 (455)
.++.+++++|+++ |++++..|..|+||||.+ ...++.+++++|++.+....
T Consensus 363 lav~~~ld~~~~~~~~~eVVklLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~ 441 (764)
T PHA02716 363 LSVVNILDPETDNDIRLDVIQCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLI 441 (764)
T ss_pred hhhhccccccccccChHHHHHHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhh
Confidence 2577888888876 777888888888888732 22456777777776542100
Q ss_pred --------------------------------------------ccccccccCCCCCcHHHHHHhcCCh-----HHHHHH
Q 012836 173 --------------------------------------------KENILNMKDKQGNTALHLATWKREC-----QVVELL 203 (455)
Q Consensus 173 --------------------------------------------~~~~~~~~d~~G~T~Lh~A~~~~~~-----~iv~~L 203 (455)
.....|..|..|+||||+|+..|+. +++++|
T Consensus 442 ~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~L 521 (764)
T PHA02716 442 RVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYL 521 (764)
T ss_pred ccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHH
Confidence 0001255688999999999999876 455999
Q ss_pred HhcCCCCCCCccccccCCCCCCHHHHHhhCCCC-cCchhHHHHHHHhcccc
Q 012836 204 LSHGANASGGLEVNATNHSGLTALDVLLSFPSE-AGDREIEEIFWSAGAMR 253 (455)
Q Consensus 204 l~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~-~~~~~i~~~L~~~ga~~ 253 (455)
++.|+ ++|.+|++|+||||+|.+.... ..+.++++.|++.|+..
T Consensus 522 L~~GA------DIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~ 566 (764)
T PHA02716 522 LSIQY------NINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNV 566 (764)
T ss_pred HhCCC------CCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCc
Confidence 99999 8999999999999999765321 33569999999998854
No 18
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.3e-31 Score=274.56 Aligned_cols=254 Identities=20% Similarity=0.164 Sum_probs=206.4
Q ss_pred CcccCHHHHHHHH--cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCC--HHHHHHHHHcCCcchhhhcCCCCcH
Q 012836 5 STRMDRRLIAAAL--TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGH--VDFVKEIIRLKPDFAKEVNQDGFSP 80 (455)
Q Consensus 5 ~~~~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~g~tp 80 (455)
+..|.||||.|+. +++.++++.|++.+.++.... ..|.||||+|+..|+ .++|+.|+++|++ ++.+|..|+||
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD--~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TP 250 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQN--NHLITPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSP 250 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCC--CCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 6779999999864 468999999999988765543 359999999999995 5999999999998 67789999999
Q ss_pred HHHH-------------------------------------HHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHH--h
Q 012836 81 MHMA-------------------------------------SANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAI--K 121 (455)
Q Consensus 81 Lh~A-------------------------------------a~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~--~ 121 (455)
||+| +..|+.+++++|++.|+++ +.+|.+|+||||+|+. .
T Consensus 251 Lh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI-N~kD~~G~TPLH~Aaa~~~ 329 (764)
T PHA02716 251 IMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL-HYKDSAGRTCLHQYILRHN 329 (764)
T ss_pred HHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce-eccCCCCCCHHHHHHHHhC
Confidence 9975 4557889999999999997 8899999999999865 4
Q ss_pred CCHHHHHHHHHhcCccccccccCCCcHHHHHHH--------------cCCHHHHHHHHHHhhhhcccccccccCCCCCcH
Q 012836 122 GRVDVVSEMLSAYGECAEDVSVQRETVLHLAVK--------------NNQFEVVRALVDWIRDVKKENILNMKDKQGNTA 187 (455)
Q Consensus 122 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~--------------~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~ 187 (455)
++.+++++|++. |++++..|..|+||||+|+. .++.+++++|+++|+++ +.+|..|.||
T Consensus 330 ~~~eIVklLLe~-GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADI------n~kn~~G~TP 402 (764)
T PHA02716 330 ISTDIIKLLHEY-GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADI------TAVNCLGYTP 402 (764)
T ss_pred CCchHHHHHHHc-CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCC------CCcCCCCCCh
Confidence 689999999987 89999999999999999875 36899999999999987 8999999999
Q ss_pred HHHH----HhcCChHHHHHHHhcCCCC-----------------------------------------------------
Q 012836 188 LHLA----TWKRECQVVELLLSHGANA----------------------------------------------------- 210 (455)
Q Consensus 188 Lh~A----~~~~~~~iv~~Ll~~ga~~----------------------------------------------------- 210 (455)
||.+ ...++.+++++|++.|+..
T Consensus 403 Lh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 482 (764)
T PHA02716 403 LTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHC 482 (764)
T ss_pred HHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHH
Confidence 9942 2356789999999876410
Q ss_pred --CCCccccccCCCCCCHHHHHhhCCC-CcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCccccccc
Q 012836 211 --SGGLEVNATNHSGLTALDVLLSFPS-EAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCIS 278 (455)
Q Consensus 211 --~~~v~~~~~n~~g~t~l~~a~~~~~-~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
....+++..|..|+||||+|+.... .....+++++|++.|+.. +.++..|.+|+.....
T Consensus 483 ~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADI---------N~~d~~G~TPLh~A~~ 544 (764)
T PHA02716 483 AIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNI---------NIPTKNGVTPLMLTMR 544 (764)
T ss_pred HHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCC---------cccCCCCCCHHHHHHH
Confidence 0012346678899999999975421 122346779999999953 4566788888765544
No 19
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=8.6e-32 Score=266.63 Aligned_cols=234 Identities=24% Similarity=0.309 Sum_probs=191.4
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC----cchhhhcCCCCc
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKP----DFAKEVNQDGFS 79 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t 79 (455)
.|+.+.||||.||..|+.|..+.|++.+.+.-. .+..|++|+|.|++.|..|+.+..+.+.+ ..++..|..|.|
T Consensus 150 ~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K--~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~ 227 (929)
T KOG0510|consen 150 EDENGFTPLHLAARKNKVEAKKELINKGADPCK--SDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKAT 227 (929)
T ss_pred cccCCCchhhHHHhcChHHHHHHHHhcCCCCCc--ccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCc
Confidence 456667788888888888866777776654422 22347788888888888888888777321 114556778899
Q ss_pred HHHHHHHcCCHHHHHHHHhcCccc--------------cccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCC
Q 012836 80 PMHMASANGQIDVVRGLMKFDQKL--------------CHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQR 145 (455)
Q Consensus 80 pLh~Aa~~g~~~iv~~Ll~~~~~~--------------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 145 (455)
|||.|+..|++++++.+|+.+... ++-.|++|.||||+||+.|+.+.++.|+.. |.+++.++.++
T Consensus 228 pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~-Ga~I~~kn~d~ 306 (929)
T KOG0510|consen 228 PLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF-GASINSKNKDE 306 (929)
T ss_pred chhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc-CCcccccCCCC
Confidence 999999999999999999876543 345689999999999999999999999987 99999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCcccc--ccCCCC
Q 012836 146 ETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVN--ATNHSG 223 (455)
Q Consensus 146 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~--~~n~~g 223 (455)
.||||.|+..|+.+.++-|++ . ....++|..|..|+||||+|++.|+..++++|++.|+. ..+ ..|.+|
T Consensus 307 ~spLH~AA~yg~~ntv~rLL~-~---~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~-----~~~~~e~D~dg 377 (929)
T KOG0510|consen 307 ESPLHFAAIYGRINTVERLLQ-E---SDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGAL-----FLNMSEADSDG 377 (929)
T ss_pred CCchHHHHHcccHHHHHHHHh-C---cCccccccccccCCCchhhhhhcCHHHHHHHHHhcChh-----hhcccccccCC
Confidence 999999999999999999998 1 23356899999999999999999999999999999994 222 459999
Q ss_pred CCHHHHHhhCCCCcCchhHHHHHHHhcccc
Q 012836 224 LTALDVLLSFPSEAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 224 ~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~ 253 (455)
+||||.|+ ..++..+++.|+.+||+-
T Consensus 378 ~TaLH~Aa----~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 378 NTALHLAA----KYGNTSAVQKLISHGADI 403 (929)
T ss_pred chhhhHHH----HhccHHHHHHHHHcCCce
Confidence 99999996 458999999999999975
No 20
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.98 E-value=5.3e-32 Score=268.10 Aligned_cols=219 Identities=26% Similarity=0.402 Sum_probs=192.0
Q ss_pred cccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccC---CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcc---------
Q 012836 2 TSYSTRMDRRLIAAALTGDVQTLQQLFVENPLILH---TPAFASAGNPLHVASAYGHVDFVKEIIRLKPDF--------- 69 (455)
Q Consensus 2 t~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--------- 69 (455)
++.+.++++++|+|+++|..+.++.++.+++..-. ...+..+.||||.|+..|+.++++.+|+.+...
T Consensus 181 ~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~ 260 (929)
T KOG0510|consen 181 CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQ 260 (929)
T ss_pred CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHH
Confidence 46788999999999999999999999995543211 122335899999999999999999999987532
Q ss_pred -----hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHH-hcCcccccccc
Q 012836 70 -----AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLS-AYGECAEDVSV 143 (455)
Q Consensus 70 -----~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~ 143 (455)
++..|.+|.||||+||+.|++++++.|+..|+++ +.++.++.||||.||.+|+.+.++.||+ ..-...+..|.
T Consensus 261 q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~ 339 (929)
T KOG0510|consen 261 QEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDL 339 (929)
T ss_pred HHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccc
Confidence 3456889999999999999999999999999999 8899999999999999999999999999 43456678889
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCC
Q 012836 144 QRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSG 223 (455)
Q Consensus 144 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g 223 (455)
.|.||||.|+++|+..+++.|+++|+.... ....|.+|+||||+|+..|+..++++|+.+|+ ++..+|+.|
T Consensus 340 ~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~---~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga------~I~~~n~~g 410 (929)
T KOG0510|consen 340 HGMTPLHLAAKSGHDRVVQLLLNKGALFLN---MSEADSDGNTALHLAAKYGNTSAVQKLISHGA------DIGVKNKKG 410 (929)
T ss_pred cCCCchhhhhhcCHHHHHHHHHhcChhhhc---ccccccCCchhhhHHHHhccHHHHHHHHHcCC------ceeeccccc
Confidence 999999999999999999999999998621 01559999999999999999999999999999 899999999
Q ss_pred CCHHHHH
Q 012836 224 LTALDVL 230 (455)
Q Consensus 224 ~t~l~~a 230 (455)
.+++|+.
T Consensus 411 ~SA~~~~ 417 (929)
T KOG0510|consen 411 KSAFDTR 417 (929)
T ss_pred ccccccc
Confidence 9999953
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.98 E-value=6.2e-31 Score=279.00 Aligned_cols=230 Identities=20% Similarity=0.218 Sum_probs=157.5
Q ss_pred ccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcc-------------
Q 012836 3 SYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDF------------- 69 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~------------- 69 (455)
..+..|.||||.|+..|+.++++.|++.+.+..... ..|.||||.|+..|+.++++.|++.+++.
T Consensus 173 ~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~--~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~ 250 (682)
T PHA02876 173 AKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIA--LDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRN 250 (682)
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccC--CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHc
Confidence 456678899999999999999999998887654332 24677777777777777777766554321
Q ss_pred ---------------hhhhcCCCCcHHHHHHHcCCH-HHHHHHHhcCccccccCCCCCCCHHHHHHHhC-CHHHHHHHHH
Q 012836 70 ---------------AKEVNQDGFSPMHMASANGQI-DVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG-RVDVVSEMLS 132 (455)
Q Consensus 70 ---------------~~~~~~~g~tpLh~Aa~~g~~-~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~ 132 (455)
.+..|..|.||||+|+..|+. +++++|++.++++ +.+|.+|.||||+|+..| +.++++.|+.
T Consensus 251 ~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~ 329 (682)
T PHA02876 251 EDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLIM 329 (682)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHHH
Confidence 233456677888888777775 5777777777776 667777777777777777 4677777666
Q ss_pred hcCccccccccCCCcHHHHHHHc-CCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCC
Q 012836 133 AYGECAEDVSVQRETVLHLAVKN-NQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANAS 211 (455)
Q Consensus 133 ~~~~~~~~~~~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 211 (455)
. |.+++..|..|.||||+|+.. ++.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 330 ~-gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadi------n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ga--- 399 (682)
T PHA02876 330 L-GADVNAADRLYITPLHQASTLDRNKDIVITLLELGANV------NARDYCDKTPIHYAAVRNNVVIINTLLDYGA--- 399 (682)
T ss_pred c-CCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCC------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC---
Confidence 5 677777777777777777764 3566777777776665 6777777777777777777777777777776
Q ss_pred CCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcc
Q 012836 212 GGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGA 251 (455)
Q Consensus 212 ~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga 251 (455)
+++..+..|.||||+|+.. .+...++++|++.|+
T Consensus 400 ---d~~~~~~~g~T~Lh~A~~~---~~~~~~vk~Ll~~ga 433 (682)
T PHA02876 400 ---DIEALSQKIGTALHFALCG---TNPYMSVKTLIDRGA 433 (682)
T ss_pred ---CccccCCCCCchHHHHHHc---CCHHHHHHHHHhCCC
Confidence 4555555555555555321 122344555555555
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.98 E-value=4e-31 Score=269.09 Aligned_cols=226 Identities=20% Similarity=0.225 Sum_probs=193.4
Q ss_pred cccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHH-----------------
Q 012836 2 TSYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIR----------------- 64 (455)
Q Consensus 2 t~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----------------- 64 (455)
+..+..|.||||.||..|+.+.++.|++....... ..+.+|||.|+..|+.++++.|+.
T Consensus 64 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~ 139 (477)
T PHA02878 64 NQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV----FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKK 139 (477)
T ss_pred CCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc----ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhc
Confidence 45678899999999999999999999987543322 247899999999988776655554
Q ss_pred ----------------cCCcchhhhcCC-CCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHH
Q 012836 65 ----------------LKPDFAKEVNQD-GFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVV 127 (455)
Q Consensus 65 ----------------~~~~~~~~~~~~-g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v 127 (455)
++++ ++..+.. |.||||+|+..|+.+++++|++.|+++ +.+|..|.||||.|+..|+.+++
T Consensus 140 ~~~~~~~~~iv~~Ll~~gad-in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv 217 (477)
T PHA02878 140 SKDDIIEAEITKLLLSYGAD-INMKDRHKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIV 217 (477)
T ss_pred cchhhHHHHHHHHHHHcCCC-CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHH
Confidence 4444 3455666 999999999999999999999999998 88999999999999999999999
Q ss_pred HHHHHhcCccccccccCCCcHHHHHHHc-CCHHHHHHHHHHhhhhcccccccccCC-CCCcHHHHHHhcCChHHHHHHHh
Q 012836 128 SEMLSAYGECAEDVSVQRETVLHLAVKN-NQFEVVRALVDWIRDVKKENILNMKDK-QGNTALHLATWKRECQVVELLLS 205 (455)
Q Consensus 128 ~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~ 205 (455)
+.|++. |.+++..|..|+||||+|+.. ++.+++++|+++|+++ |.++. .|+||||+| .++.+++++|++
T Consensus 218 ~~Ll~~-ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv------n~~~~~~g~TpLh~A--~~~~~~v~~Ll~ 288 (477)
T PHA02878 218 HILLEN-GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV------NAKSYILGLTALHSS--IKSERKLKLLLE 288 (477)
T ss_pred HHHHHc-CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC------CccCCCCCCCHHHHH--ccCHHHHHHHHH
Confidence 999987 899999999999999999976 6899999999999987 77775 899999999 578899999999
Q ss_pred cCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcc
Q 012836 206 HGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGA 251 (455)
Q Consensus 206 ~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga 251 (455)
+|+ +++.+|..|.||||+|+.. ....++.++|...+.
T Consensus 289 ~ga------din~~d~~g~TpL~~A~~~---~~~~~~~~~li~~~~ 325 (477)
T PHA02878 289 YGA------DINSLNSYKLTPLSSAVKQ---YLCINIGRILISNIC 325 (477)
T ss_pred CCC------CCCCcCCCCCCHHHHHHHH---cCccchHHHHHHHHH
Confidence 999 8999999999999999752 234567777776654
No 23
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.98 E-value=9e-31 Score=267.38 Aligned_cols=231 Identities=18% Similarity=0.214 Sum_probs=196.8
Q ss_pred cccCHHHHHHHHcC--CHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC------CHHHHHHHHHcCCcchhhhcCCC
Q 012836 6 TRMDRRLIAAALTG--DVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG------HVDFVKEIIRLKPDFAKEVNQDG 77 (455)
Q Consensus 6 ~~~~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g------~~~~v~~Ll~~~~~~~~~~~~~g 77 (455)
..|.++||.++..+ +.++++.|++.|.+++... .+.||||.|+..+ +.++++.|+++|++ ++.+|..|
T Consensus 33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~---~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g 108 (494)
T PHA02989 33 YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG---YIETPLCAVLRNREITSNKIKKIVKLLLKFGAD-INLKTFNG 108 (494)
T ss_pred cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC---CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCC-CCCCCCCC
Confidence 35778887766543 6899999999998876542 3789999998754 46899999999998 57789999
Q ss_pred CcHHHHHHHc---CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHh--CCHHHHHHHHHhcCccccc-cccCCCcHHHH
Q 012836 78 FSPMHMASAN---GQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK--GRVDVVSEMLSAYGECAED-VSVQRETVLHL 151 (455)
Q Consensus 78 ~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~-~~~~g~t~Lh~ 151 (455)
.||||.|+.. |+.+++++|+++|+++.+.+|..|+||||+|+.. ++.+++++|+++ |.+++. .+..|.||||+
T Consensus 109 ~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-Gadi~~~~~~~g~tpL~~ 187 (494)
T PHA02989 109 VSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLFEKTSLYGLTPMNI 187 (494)
T ss_pred CcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCccccccccCCChHHH
Confidence 9999988765 6899999999999998567899999999998764 689999999997 888887 67899999999
Q ss_pred HHHcC----CHHHHHHHHHHhhhhcccc--------------------------------cccccCCCCCcHHHHHHhcC
Q 012836 152 AVKNN----QFEVVRALVDWIRDVKKEN--------------------------------ILNMKDKQGNTALHLATWKR 195 (455)
Q Consensus 152 A~~~~----~~~~v~~Ll~~g~~~~~~~--------------------------------~~~~~d~~G~T~Lh~A~~~~ 195 (455)
|++.+ +.+++++|+++|+++.... .+|.+|..|+||||+|+..+
T Consensus 188 a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~ 267 (494)
T PHA02989 188 YLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVD 267 (494)
T ss_pred HHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhc
Confidence 98765 8999999999998764221 25788999999999999999
Q ss_pred ChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcc
Q 012836 196 ECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGA 251 (455)
Q Consensus 196 ~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga 251 (455)
+.+++++|+++|+ +++.+|..|.||||+|+. .++.++++.|++.+.
T Consensus 268 ~~~~v~~LL~~Ga------din~~d~~G~TpL~~A~~----~~~~~iv~~LL~~~p 313 (494)
T PHA02989 268 NYEAFNYLLKLGD------DIYNVSKDGDTVLTYAIK----HGNIDMLNRILQLKP 313 (494)
T ss_pred CHHHHHHHHHcCC------CccccCCCCCCHHHHHHH----cCCHHHHHHHHhcCC
Confidence 9999999999999 899999999999999974 478899999988654
No 24
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=262.83 Aligned_cols=231 Identities=16% Similarity=0.166 Sum_probs=197.7
Q ss_pred cCHHHHHHHH--cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHc-----CCHHHHHHHHHcCCcchhhhcCCCCcH
Q 012836 8 MDRRLIAAAL--TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAY-----GHVDFVKEIIRLKPDFAKEVNQDGFSP 80 (455)
Q Consensus 8 ~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~g~tp 80 (455)
+.|+++.+.. .++.++++.|++.|.++.... ..|.||||.|+.. ++.++++.|+++|++ ++..|..|.||
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d--~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~Tp 112 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFINLGANVNGLD--NEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETP 112 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCC--CCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcH
Confidence 4566654444 448899999999998775443 3599999998864 678999999999998 67889999999
Q ss_pred HHHHHHcC---CHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCC---HHHHHHHHHhcCccccccc-cCCCcHHHHHH
Q 012836 81 MHMASANG---QIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGR---VDVVSEMLSAYGECAEDVS-VQRETVLHLAV 153 (455)
Q Consensus 81 Lh~Aa~~g---~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~ 153 (455)
||+|+..+ +.+++++|+++|+++ +.+|.+|.||||+|+..|+ .++++.|+++ |.+++..+ ..|.||||.++
T Consensus 113 Lh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-gadin~~~~~~~~t~Lh~~~ 190 (489)
T PHA02798 113 LYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-GVDINTHNNKEKYDTLHCYF 190 (489)
T ss_pred HHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHh-CCCcccccCcCCCcHHHHHH
Confidence 99999886 789999999999998 8899999999999999998 9999999998 88888774 57899999987
Q ss_pred Hc----CCHHHHHHHHHHhhhhccc---------------------------------ccccccCCCCCcHHHHHHhcCC
Q 012836 154 KN----NQFEVVRALVDWIRDVKKE---------------------------------NILNMKDKQGNTALHLATWKRE 196 (455)
Q Consensus 154 ~~----~~~~~v~~Ll~~g~~~~~~---------------------------------~~~~~~d~~G~T~Lh~A~~~~~ 196 (455)
.. ++.+++++|+++|+++... ..+|.+|..|+||||+|+..++
T Consensus 191 ~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~ 270 (489)
T PHA02798 191 KYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNN 270 (489)
T ss_pred HhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCc
Confidence 65 4799999999998765321 1367889999999999999999
Q ss_pred hHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccc
Q 012836 197 CQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 197 ~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~ 253 (455)
.+++++|+++|+ +++.+|..|+|||++|+. .+..++++.|++.++..
T Consensus 271 ~~~v~~LL~~GA------din~~d~~G~TpL~~A~~----~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 271 RKIFEYLLQLGG------DINIITELGNTCLFTAFE----NESKFIFNSILNKKPNK 317 (489)
T ss_pred HHHHHHHHHcCC------cccccCCCCCcHHHHHHH----cCcHHHHHHHHccCCCH
Confidence 999999999999 899999999999999964 57889999999988754
No 25
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=4.1e-30 Score=272.79 Aligned_cols=227 Identities=26% Similarity=0.367 Sum_probs=171.7
Q ss_pred cCcccCHHHHHHHHcCCH-HHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC-CHHHHHHHHHcCCcchhhhcCCCCcHH
Q 012836 4 YSTRMDRRLIAAALTGDV-QTLQQLFVENPLILHTPAFASAGNPLHVASAYG-HVDFVKEIIRLKPDFAKEVNQDGFSPM 81 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~tpL 81 (455)
.+..|.||||.|+..|+. ++++.|++.+.+.... +..|.||||+|+..| +.++++.|++.+.+ .+..|..|.|||
T Consensus 269 ~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~--d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad-in~~d~~g~TpL 345 (682)
T PHA02876 269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAK--NIKGETPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLYITPL 345 (682)
T ss_pred CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHhCCCHHHHHHHHHcCCC-CCCcccCCCcHH
Confidence 455677888888888876 4666666666554332 234788888888887 47888888887776 466677888888
Q ss_pred HHHHHc-CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCC-HH
Q 012836 82 HMASAN-GQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQ-FE 159 (455)
Q Consensus 82 h~Aa~~-g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~ 159 (455)
|+|+.. ++.++++.|++.++++ +.+|..|.||||+|+..|+.++++.|++. |.+++..+..|.||||+|+..++ ..
T Consensus 346 h~A~~~~~~~~iv~lLl~~gadi-n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~ 423 (682)
T PHA02876 346 HQASTLDRNKDIVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYM 423 (682)
T ss_pred HHHHHhCCcHHHHHHHHHcCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHH
Confidence 888774 4677888888888777 77788888888888888888888888876 77778788888888888877655 45
Q ss_pred HHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcC-ChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcC
Q 012836 160 VVRALVDWIRDVKKENILNMKDKQGNTALHLATWKR-ECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAG 238 (455)
Q Consensus 160 ~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~-~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~ 238 (455)
++++|++.|+++ |.+|.+|+||||+|+..+ +.+++++|++.|+ +++.+|..|.||+++|...
T Consensus 424 ~vk~Ll~~gadi------n~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Ga------d~n~~d~~g~tpl~~a~~~----- 486 (682)
T PHA02876 424 SVKTLIDRGANV------NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGA------DVNAINIQNQYPLLIALEY----- 486 (682)
T ss_pred HHHHHHhCCCCC------CcCCCCCChHHHHHHHhCCcHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHh-----
Confidence 678888877776 788888888888888765 5788888888887 7888888888888888642
Q ss_pred chhHHHHHHHhcccc
Q 012836 239 DREIEEIFWSAGAMR 253 (455)
Q Consensus 239 ~~~i~~~L~~~ga~~ 253 (455)
.+++++|+..|+..
T Consensus 487 -~~~v~~Ll~~~a~~ 500 (682)
T PHA02876 487 -HGIVNILLHYGAEL 500 (682)
T ss_pred -CCHHHHHHHCCCCC
Confidence 24778888877743
No 26
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.5e-28 Score=221.60 Aligned_cols=172 Identities=18% Similarity=0.284 Sum_probs=154.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcC--CHHHHHHHHhcCccccccCC-CCCCCHHHHH
Q 012836 42 SAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANG--QIDVVRGLMKFDQKLCHLQG-PERKTPLHFA 118 (455)
Q Consensus 42 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A 118 (455)
.+.||||.|+..|+.++|+.|++. .+..|..|.||||+|+..+ +.+++++|+++++++ +.++ ..|.||||+|
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a 94 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHY 94 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHH
Confidence 478999999999999999999975 3456889999999999855 899999999999998 6665 5899999998
Q ss_pred HHh---CCHHHHHHHHHhcCccccccccCCCcHHHHHHH--cCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHH-HH
Q 012836 119 AIK---GRVDVVSEMLSAYGECAEDVSVQRETVLHLAVK--NNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHL-AT 192 (455)
Q Consensus 119 ~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~-A~ 192 (455)
+.. ++.++++.|+++ |.+++..|..|+||||+|+. .++.+++++|+++|+++ +.+|.+|+||||. |+
T Consensus 95 ~~~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi------n~~d~~g~t~Lh~~a~ 167 (209)
T PHA02859 95 LSFNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF------LNKDFDNNNILYSYIL 167 (209)
T ss_pred HHhCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc------ccccCCCCcHHHHHHH
Confidence 864 479999999987 99999999999999999986 46899999999999887 8999999999995 56
Q ss_pred hcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHh
Q 012836 193 WKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLL 231 (455)
Q Consensus 193 ~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~ 231 (455)
..++.+++++|+++|+ +++.+|..|.||||+|.
T Consensus 168 ~~~~~~iv~~Ll~~Ga------di~~~d~~g~tpl~la~ 200 (209)
T PHA02859 168 FHSDKKIFDFLTSLGI------DINETNKSGYNCYDLIK 200 (209)
T ss_pred hcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHh
Confidence 7789999999999998 89999999999999995
No 27
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96 E-value=5.8e-29 Score=242.33 Aligned_cols=210 Identities=27% Similarity=0.383 Sum_probs=182.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC
Q 012836 43 AGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG 122 (455)
Q Consensus 43 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 122 (455)
-.+.++.|++.|..+-|+.|++.....++..|++|.|+||+||.+++.+++++|+++++++......-+.||||+|+++|
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 35678899999999999999999444478889999999999999999999999999999994444478899999999999
Q ss_pred CHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHH
Q 012836 123 RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVEL 202 (455)
Q Consensus 123 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~ 202 (455)
+..+++.|+++ |++++.+|.+|.|+||+|++.++.-.+-+++.+|+++ +.+|.+|+||||+|+.+|....++.
T Consensus 124 ~~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~------d~~D~~grTpLmwAaykg~~~~v~~ 196 (600)
T KOG0509|consen 124 HISVVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI------DLRDNNGRTPLMWAAYKGFALFVRR 196 (600)
T ss_pred cHHHHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC------CCcCCCCCCHHHHHHHhcccHHHHH
Confidence 99999999998 9999999999999999999999999999999998777 9999999999999999999988999
Q ss_pred HHhcCCCCCCCccccccC-CCCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCccccccc
Q 012836 203 LLSHGANASGGLEVNATN-HSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCIS 278 (455)
Q Consensus 203 Ll~~ga~~~~~v~~~~~n-~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
|++-|+ .++.+| ++|+||||.|+. .++.+.+.++++.|+. .+..+.+|++|.+...+
T Consensus 197 LL~f~a------~~~~~d~~~g~TpLHwa~~----~gN~~~v~Ll~~g~~~---------~d~~~~~g~tp~~LA~~ 254 (600)
T KOG0509|consen 197 LLKFGA------SLLLTDDNHGNTPLHWAVV----GGNLTAVKLLLEGGAD---------LDKTNTNGKTPFDLAQE 254 (600)
T ss_pred HHHhcc------cccccccccCCchHHHHHh----cCCcceEehhhhcCCc---------ccccccCCCCHHHHHHH
Confidence 999998 788887 999999999964 4777777766666663 23444557777554433
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=6.8e-28 Score=246.24 Aligned_cols=240 Identities=17% Similarity=0.192 Sum_probs=197.0
Q ss_pred HHHHHH---cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHc--CCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHH
Q 012836 12 LIAAAL---TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAY--GHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASA 86 (455)
Q Consensus 12 L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~ 86 (455)
||.-+. ..+.+.++.|++.|.+++.. ..|.||||.++.. ++.++|+.|+++|+++ +..+ .+.||||.|+.
T Consensus 4 l~~y~~~~~~~~~~~v~~LL~~GadvN~~---~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdv-n~~~-~~~tpL~~a~~ 78 (494)
T PHA02989 4 LYEYILYSDTVDKNALEFLLRTGFDVNEE---YRGNSILLLYLKRKDVKIKIVKLLIDNGADV-NYKG-YIETPLCAVLR 78 (494)
T ss_pred HHHHHHcCCcCcHHHHHHHHHcCCCcccc---cCCCCHHHHHHhcCCCChHHHHHHHHcCCCc-cCCC-CCCCcHHHHHh
Confidence 454444 47899999999999887654 2489999866554 3789999999999884 4444 57999999987
Q ss_pred cC------CHHHHHHHHhcCccccccCCCCCCCHHHHHHHh---CCHHHHHHHHHhcCccc-cccccCCCcHHHHHHHc-
Q 012836 87 NG------QIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK---GRVDVVSEMLSAYGECA-EDVSVQRETVLHLAVKN- 155 (455)
Q Consensus 87 ~g------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~-~~~~~~g~t~Lh~A~~~- 155 (455)
++ +.+++++|+++|+++ +.+|.+|.||||.|+.. |+.+++++|+++ |+++ +..|..|+||||+|+..
T Consensus 79 ~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~d~~g~tpLh~a~~~~ 156 (494)
T PHA02989 79 NREITSNKIKKIVKLLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVKNSRGYNLLHMYLESF 156 (494)
T ss_pred ccCcchhhHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCcccccCCCCCCHHHHHHHhc
Confidence 54 578999999999998 88999999999998765 679999999998 8999 78999999999998765
Q ss_pred -CCHHHHHHHHHHhhhhcccccccc-cCCCCCcHHHHHHhcC----ChHHHHHHHhcCCCCCC-----------------
Q 012836 156 -NQFEVVRALVDWIRDVKKENILNM-KDKQGNTALHLATWKR----ECQVVELLLSHGANASG----------------- 212 (455)
Q Consensus 156 -~~~~~v~~Ll~~g~~~~~~~~~~~-~d~~G~T~Lh~A~~~~----~~~iv~~Ll~~ga~~~~----------------- 212 (455)
++.+++++|+++|+++ +. .|..|.||||+|+..+ +.+++++|+++|++.+.
T Consensus 157 ~~~~~iv~~Ll~~Gadi------~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~ 230 (494)
T PHA02989 157 SVKKDVIKILLSFGVNL------FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNK 230 (494)
T ss_pred cCCHHHHHHHHHcCCCc------cccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhch
Confidence 5799999999999987 65 6889999999998764 89999999999986421
Q ss_pred ---------------CccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCCCCCCcccccc
Q 012836 213 ---------------GLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEPHGQTSVDNCI 277 (455)
Q Consensus 213 ---------------~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
+.++|.+|..|+||||+|+. .++.+++++|+++|++. +.++..|.+|+....
T Consensus 231 ~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~----~~~~~~v~~LL~~Gadi---------n~~d~~G~TpL~~A~ 297 (494)
T PHA02989 231 ILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAK----VDNYEAFNYLLKLGDDI---------YNVSKDGDTVLTYAI 297 (494)
T ss_pred hhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHH----hcCHHHHHHHHHcCCCc---------cccCCCCCCHHHHHH
Confidence 13567888999999999974 47889999999999954 344566777765443
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=9.9e-29 Score=231.13 Aligned_cols=217 Identities=27% Similarity=0.392 Sum_probs=173.9
Q ss_pred HHHHHcCCHHHHHHHHhcCCcc--cC-CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchh--------hhcCCCCcHH
Q 012836 13 IAAALTGDVQTLQQLFVENPLI--LH-TPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAK--------EVNQDGFSPM 81 (455)
Q Consensus 13 ~~A~~~g~~~~v~~Ll~~~~~~--~~-~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~--------~~~~~g~tpL 81 (455)
..|++.|+...+..|+.+.... .. ......|.|||.+||++||.++|++|+++....+. --..+|-+||
T Consensus 9 ~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappL 88 (615)
T KOG0508|consen 9 INAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPL 88 (615)
T ss_pred HHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchh
Confidence 4788888888888888654321 10 11122478999999999999999999985432111 1245678899
Q ss_pred HHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHH
Q 012836 82 HMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVV 161 (455)
Q Consensus 82 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v 161 (455)
-.|+..||.++|+.|+++++++ +....-..|||..||.-|+.|++++|+++ +.+++..|+.|.|.||+||..|+.+|+
T Consensus 89 WaAsaAGHl~vVk~L~~~ga~V-N~tT~TNStPLraACfDG~leivKyLvE~-gad~~IanrhGhTcLmIa~ykGh~~I~ 166 (615)
T KOG0508|consen 89 WAASAAGHLEVVKLLLRRGASV-NDTTRTNSTPLRAACFDGHLEIVKYLVEH-GADPEIANRHGHTCLMIACYKGHVDIA 166 (615)
T ss_pred hHHhccCcHHHHHHHHHhcCcc-ccccccCCccHHHHHhcchhHHHHHHHHc-CCCCcccccCCCeeEEeeeccCchHHH
Confidence 9999999999999999999877 65666677999999999999999999977 889999999999999999999999999
Q ss_pred HHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchh
Q 012836 162 RALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDRE 241 (455)
Q Consensus 162 ~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~ 241 (455)
++|++.|+|+ |.++..|||+||.++..|+.+++++|+++|+ .-.+|..|.|||-.|. ..+..+
T Consensus 167 qyLle~gADv------n~ks~kGNTALH~caEsG~vdivq~Ll~~ga-------~i~~d~~GmtPL~~Aa----~tG~~~ 229 (615)
T KOG0508|consen 167 QYLLEQGADV------NAKSYKGNTALHDCAESGSVDIVQLLLKHGA-------KIDVDGHGMTPLLLAA----VTGHTD 229 (615)
T ss_pred HHHHHhCCCc------chhcccCchHHHhhhhcccHHHHHHHHhCCc-------eeeecCCCCchHHHHh----hhcchH
Confidence 9999999887 8999999999999999999999999999987 2245666999998883 457888
Q ss_pred HHHHHHH
Q 012836 242 IEEIFWS 248 (455)
Q Consensus 242 i~~~L~~ 248 (455)
+++.|++
T Consensus 230 iVe~L~~ 236 (615)
T KOG0508|consen 230 IVERLLQ 236 (615)
T ss_pred HHHHHhc
Confidence 8888875
No 30
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.4e-27 Score=246.23 Aligned_cols=234 Identities=17% Similarity=0.129 Sum_probs=185.9
Q ss_pred ccCcccCHHHHHHHHc---CCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHH----HHHHHHHcCCcchhhhcC
Q 012836 3 SYSTRMDRRLIAAALT---GDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVD----FVKEIIRLKPDFAKEVNQ 75 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~ 75 (455)
..|+.|.|+||.|+.. |+.++++.|++.+.+.... +..|.||||.|+..|+.+ +++.|++.+.. .+..+
T Consensus 27 ~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~--~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~~~- 102 (661)
T PHA02917 27 TRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK--NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNIND- 102 (661)
T ss_pred ccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc--CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCCCC-
Confidence 3477899999997655 8899999999999877543 346999999999999954 55777776432 12222
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHH--HhCCHHHHHHHHHhcCcccccccc---CC-----
Q 012836 76 DGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAA--IKGRVDVVSEMLSAYGECAEDVSV---QR----- 145 (455)
Q Consensus 76 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~---~g----- 145 (455)
..+++|.|+.+|+.++|++|+++|+++ +.+|.+|+||||.|+ ..|+.+++++|+++ |++++..|. .|
T Consensus 103 -~~~~~~~a~~~~~~e~vk~Ll~~Gadi-n~~d~~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn~~d~~~~~g~~~~~ 179 (661)
T PHA02917 103 -FNIFSYMKSKNVDVDLIKVLVEHGFDL-SVKCENHRSVIENYVMTDDPVPEIIDLFIEN-GCSVLYEDEDDEYGYAYDD 179 (661)
T ss_pred -cchHHHHHhhcCCHHHHHHHHHcCCCC-CccCCCCccHHHHHHHccCCCHHHHHHHHHc-CCCcccccccccccccccc
Confidence 347788899999999999999999999 889999999999654 57899999999998 888875543 23
Q ss_pred ------CcHHHHHHH-----------cCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCCh--HHHHHHHhc
Q 012836 146 ------ETVLHLAVK-----------NNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKREC--QVVELLLSH 206 (455)
Q Consensus 146 ------~t~Lh~A~~-----------~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~--~iv~~Ll~~ 206 (455)
.||||+|+. .++.+++++|+++|+++ |.+|.+|+||||+|+..|+. +++++|++
T Consensus 180 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv------n~~d~~G~TpLh~A~~~g~~~~eivk~Li~- 252 (661)
T PHA02917 180 YQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP------SSIDKNYCTALQYYIKSSHIDIDIVKLLMK- 252 (661)
T ss_pred ccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc------ccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-
Confidence 599999986 45899999999999998 99999999999999999985 79999975
Q ss_pred CCCCCCCccccccCCCCCCHHHHHhhCC-----CCcCchhHHHHHHHhccc
Q 012836 207 GANASGGLEVNATNHSGLTALDVLLSFP-----SEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 207 ga~~~~~v~~~~~n~~g~t~l~~a~~~~-----~~~~~~~i~~~L~~~ga~ 252 (455)
|++... .....|..|.+|++++.... ....+.+++++|+++|+.
T Consensus 253 g~d~~~--~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~ 301 (661)
T PHA02917 253 GIDNTA--YSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP 301 (661)
T ss_pred CCcccc--cccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC
Confidence 773110 11246667888888886321 113478999999999984
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=1.8e-28 Score=229.44 Aligned_cols=193 Identities=23% Similarity=0.314 Sum_probs=173.1
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhcCCcc-------cCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCC
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVENPLI-------LHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQD 76 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~-------~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 76 (455)
....|.|||..|+++|+.++|++|+++.... ......-.|-+||-.|+..||.++|+.|++++.+ ++.....
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~-VN~tT~T 116 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGAS-VNDTTRT 116 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCc-ccccccc
Confidence 4567789999999999999999999953221 1111222488999999999999999999999977 5666777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcC
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNN 156 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~ 156 (455)
..|||--||.-|+.++|++|+++++++ ++.|..|.|+||+||..||.+++++|++. |++++.++.+|+|+||.+++.|
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~ykGh~~I~qyLle~-gADvn~ks~kGNTALH~caEsG 194 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIACYKGHVDIAQYLLEQ-GADVNAKSYKGNTALHDCAESG 194 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeeeccCchHHHHHHHHh-CCCcchhcccCchHHHhhhhcc
Confidence 889999999999999999999999999 99999999999999999999999999998 9999999999999999999999
Q ss_pred CHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhc
Q 012836 157 QFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 157 ~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
+.+++++|+++|+.+ .+|..|.|||..|+..|+.++++.|++.
T Consensus 195 ~vdivq~Ll~~ga~i-------~~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 195 SVDIVQLLLKHGAKI-------DVDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred cHHHHHHHHhCCcee-------eecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 999999999999875 5788899999999999999999999973
No 32
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=3.2e-27 Score=212.93 Aligned_cols=177 Identities=14% Similarity=0.172 Sum_probs=154.2
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCcchhhhc-CCCCcHH
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG--HVDFVKEIIRLKPDFAKEVN-QDGFSPM 81 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~-~~g~tpL 81 (455)
.++..+|||.|+..|+.+.|+.|++... . .+..|.||||+|+..+ +.+++++|+++++++ +.++ ..|.|||
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~n----~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpL 91 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKFVN----D-CNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSAL 91 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHhhh----c-cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHH
Confidence 4567899999999999999999997521 1 2345999999999854 899999999999985 5554 5899999
Q ss_pred HHHHHc---CCHHHHHHHHhcCccccccCCCCCCCHHHHHHH--hCCHHHHHHHHHhcCccccccccCCCcHHHH-HHHc
Q 012836 82 HMASAN---GQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAI--KGRVDVVSEMLSAYGECAEDVSVQRETVLHL-AVKN 155 (455)
Q Consensus 82 h~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~-A~~~ 155 (455)
|+|+.. ++.+++++|+++++++ +.+|.+|.||||.|+. .++.+++++|++. +.+++.+|.+|.||||. |+..
T Consensus 92 h~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~ 169 (209)
T PHA02859 92 HHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFH 169 (209)
T ss_pred HHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhc
Confidence 998764 4799999999999998 8899999999999986 4689999999987 89999999999999996 5678
Q ss_pred CCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcC
Q 012836 156 NQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKR 195 (455)
Q Consensus 156 ~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 195 (455)
++.+++++|+++|+++ +.+|..|.||||+|...+
T Consensus 170 ~~~~iv~~Ll~~Gadi------~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 170 SDKKIFDFLTSLGIDI------NETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CCHHHHHHHHHcCCCC------CCCCCCCCCHHHHHhhhh
Confidence 8999999999999987 899999999999998653
No 33
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95 E-value=7.2e-27 Score=238.39 Aligned_cols=197 Identities=16% Similarity=0.191 Sum_probs=171.6
Q ss_pred cccCcccCHHHHHHHHc-----CCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC---CHHHHHHHHHcCCcchhhh
Q 012836 2 TSYSTRMDRRLIAAALT-----GDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG---HVDFVKEIIRLKPDFAKEV 73 (455)
Q Consensus 2 t~~~~~~~t~L~~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~ 73 (455)
+..+..|.||||.|+.. +..++++.|++.+.++.... ..|.||||+|+..| +.+++++|+++|++ ++..
T Consensus 65 n~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d--~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad-vn~~ 141 (489)
T PHA02798 65 NGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKN--SDGETPLYCLLSNGYINNLEILLFMIENGAD-TTLL 141 (489)
T ss_pred CCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCC--CCcCcHHHHHHHcCCcChHHHHHHHHHcCCC-cccc
Confidence 45678899999999864 67999999999998765443 35999999999976 78999999999988 5788
Q ss_pred cCCCCcHHHHHHHcCC---HHHHHHHHhcCccccccCCCCCCCHHHHHHHh----CCHHHHHHHHHhcCc----------
Q 012836 74 NQDGFSPMHMASANGQ---IDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK----GRVDVVSEMLSAYGE---------- 136 (455)
Q Consensus 74 ~~~g~tpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~----g~~~~v~~Ll~~~~~---------- 136 (455)
|..|.||||+|+..|+ .+++++|++.|+++....+..|.||||.++.. ++.+++++|+++ |.
T Consensus 142 d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~-Ga~i~~~~~~~~ 220 (489)
T PHA02798 142 DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDN-GFIINKENKSHK 220 (489)
T ss_pred CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHC-CCCcccCCcccc
Confidence 9999999999999998 99999999999998333356789999998764 478888888875 32
Q ss_pred -----------------------------cccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcH
Q 012836 137 -----------------------------CAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTA 187 (455)
Q Consensus 137 -----------------------------~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~ 187 (455)
+++..|..|+||||+|+..|+.+++++|+++|+++ |.+|..|+||
T Consensus 221 ~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi------n~~d~~G~Tp 294 (489)
T PHA02798 221 KKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDI------NIITELGNTC 294 (489)
T ss_pred chHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcc------cccCCCCCcH
Confidence 34556778999999999999999999999999998 9999999999
Q ss_pred HHHHHhcCChHHHHHHHhcCC
Q 012836 188 LHLATWKRECQVVELLLSHGA 208 (455)
Q Consensus 188 Lh~A~~~~~~~iv~~Ll~~ga 208 (455)
||+|+..++.++++.|+++++
T Consensus 295 L~~A~~~~~~~iv~~lL~~~~ 315 (489)
T PHA02798 295 LFTAFENESKFIFNSILNKKP 315 (489)
T ss_pred HHHHHHcCcHHHHHHHHccCC
Confidence 999999999999999999998
No 34
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=4.6e-26 Score=236.71 Aligned_cols=210 Identities=17% Similarity=0.181 Sum_probs=169.2
Q ss_pred HHHHHHHHhcCCcccCCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHH----HH
Q 012836 21 VQTLQQLFVENPLILHTPAFASAGNPLHVASAY---GHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQID----VV 93 (455)
Q Consensus 21 ~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~----iv 93 (455)
++.+++|+.++... .. .+..|+||||+|+.. |+.++|+.|++.+.+. +..+..|+||||+|+..|+.+ ++
T Consensus 12 ~~~~~~l~~~~~~~-~~-~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v-~~~~~~g~TpL~~Aa~~g~~~v~~~~~ 88 (661)
T PHA02917 12 LDELKQMLRDRDPN-DT-RNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNP-LHKNWRQLTPLEEYTNSRHVKVNKDIA 88 (661)
T ss_pred HHHHHHHHhccCcc-cc-cCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCChhHHHHHH
Confidence 57889999755444 22 234699999998665 8899999999999884 667999999999999999854 56
Q ss_pred HHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHH--HcCCHHHHHHHHHHhhhh
Q 012836 94 RGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAV--KNNQFEVVRALVDWIRDV 171 (455)
Q Consensus 94 ~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~v~~Ll~~g~~~ 171 (455)
+.|++.+... +..+ ..+++|.|+..|+.+++++|+++ |++++..|.+|+||||.|+ ..|+.+++++|+++|+++
T Consensus 89 ~~Ll~~~~~~-n~~~--~~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v 164 (661)
T PHA02917 89 MALLEATGYS-NIND--FNIFSYMKSKNVDVDLIKVLVEH-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV 164 (661)
T ss_pred HHHHhccCCC-CCCC--cchHHHHHhhcCCHHHHHHHHHc-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc
Confidence 7888765432 3333 34778889999999999999988 9999999999999999654 578999999999999987
Q ss_pred cccccccccC---CCC-----------CcHHHHHHh-----------cCChHHHHHHHhcCCCCCCCccccccCCCCCCH
Q 012836 172 KKENILNMKD---KQG-----------NTALHLATW-----------KRECQVVELLLSHGANASGGLEVNATNHSGLTA 226 (455)
Q Consensus 172 ~~~~~~~~~d---~~G-----------~T~Lh~A~~-----------~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~ 226 (455)
|.+| ..| .||||+|+. .++.+++++|+++|+ +++.+|.+|.||
T Consensus 165 ------n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Ga------dvn~~d~~G~Tp 232 (661)
T PHA02917 165 ------LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGI------KPSSIDKNYCTA 232 (661)
T ss_pred ------cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCC------CcccCCCCCCcH
Confidence 4433 233 699999986 468899999999999 899999999999
Q ss_pred HHHHhhCCCCcCchhHHHHHHHhccc
Q 012836 227 LDVLLSFPSEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 227 l~~a~~~~~~~~~~~i~~~L~~~ga~ 252 (455)
||+|+... ....+++++|.+ |+.
T Consensus 233 Lh~A~~~g--~~~~eivk~Li~-g~d 255 (661)
T PHA02917 233 LQYYIKSS--HIDIDIVKLLMK-GID 255 (661)
T ss_pred HHHHHHcC--CCcHHHHHHHHh-CCc
Confidence 99997541 223589999975 764
No 35
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=3e-27 Score=248.48 Aligned_cols=229 Identities=30% Similarity=0.395 Sum_probs=166.0
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcc---------------
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDF--------------- 69 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--------------- 69 (455)
.+.+.+++|.|+.+|..+.++.++.++...... ...|.||||.|+..++.++|+.+++++.+.
T Consensus 371 ~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~--gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa 448 (1143)
T KOG4177|consen 371 EEKGFTPLHLAVKSGRVSVVELLLEAGADPNSA--GKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAA 448 (1143)
T ss_pred cccCCcchhhhcccCchhHHHhhhhccCCcccC--CCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhh
Confidence 457788899999999999998888877653221 123444444444444444444444444431
Q ss_pred ------------------hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHH
Q 012836 70 ------------------AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEML 131 (455)
Q Consensus 70 ------------------~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 131 (455)
.+..-..|.||||+|+..|+.++++.|++.++.. +...+.+.+++|.|...+...+++.++
T Consensus 449 ~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~-~~~~~~~l~~lhla~~~~~v~~~~~l~ 527 (1143)
T KOG4177|consen 449 KKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAND-NLDAKKGLTPLHLAADEDTVKVAKILL 527 (1143)
T ss_pred hcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCcc-CccchhccchhhhhhhhhhHHHHHHHh
Confidence 3444445555555555555555555555544333 344444555555555555555555555
Q ss_pred HhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCC
Q 012836 132 SAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANAS 211 (455)
Q Consensus 132 ~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 211 (455)
++ +..++..+.+|.||||+|+..|+.++|++|+++|++. +.+|+.|+||||.|+..|+.+++++|+++|+
T Consensus 528 ~~-ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv------~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA--- 597 (1143)
T KOG4177|consen 528 EH-GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADV------NAKDKLGYTPLHQAAQQGHNDIAELLLKHGA--- 597 (1143)
T ss_pred hc-CCceehhcccccchHHHHHhcCCchHHHHhhhCCccc------cccCCCCCChhhHHHHcChHHHHHHHHHcCC---
Confidence 55 6777788889999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccc
Q 012836 212 GGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 212 ~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~ 253 (455)
++|..|.+|.|||++|.. .+..++++.|+..++.+
T Consensus 598 ---~vna~d~~g~TpL~iA~~----lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 598 ---SVNAADLDGFTPLHIAVR----LGYLSVVKLLKVVTATP 632 (1143)
T ss_pred ---CCCcccccCcchhHHHHH----hcccchhhHHHhccCcc
Confidence 899999999999999964 48889999999999974
No 36
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=8.4e-26 Score=219.10 Aligned_cols=205 Identities=20% Similarity=0.146 Sum_probs=171.7
Q ss_pred HHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcch-----hhhcCCCCcHHHHHHH--cCCHHHHHHHH
Q 012836 25 QQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFA-----KEVNQDGFSPMHMASA--NGQIDVVRGLM 97 (455)
Q Consensus 25 ~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g~tpLh~Aa~--~g~~~iv~~Ll 97 (455)
++++.++..+.....+ | +|+..+..|+++.|+.++.+.. -..+..++|+||+++. .|+.++|++|+
T Consensus 66 ~~~~~~~~~i~~~~~~--~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI 138 (437)
T PHA02795 66 DYFRIHRDNIDQYIVD--R-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV 138 (437)
T ss_pred HHHHHcCcchhhhhhh--h-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence 4445555554443332 2 8999999999999999998732 1567889999999999 99999999999
Q ss_pred hcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCcc-cccc-----ccCCCcHHHHHHHcCCHHHHHHHHHHhhhh
Q 012836 98 KFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGEC-AEDV-----SVQRETVLHLAVKNNQFEVVRALVDWIRDV 171 (455)
Q Consensus 98 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~~~~-----~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 171 (455)
++|+++ +. .++.||+|.|+..|+.+++++|+++ |.. .+.. +..+.+++|.|+..++.+++++|+++|+++
T Consensus 139 ~~GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI 214 (437)
T PHA02795 139 DHGAVI-YK--IECLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI 214 (437)
T ss_pred HCCCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc
Confidence 999998 44 3458999999999999999999998 543 2222 234779999999999999999999999987
Q ss_pred cccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCC----CcCchhHHHHHH
Q 012836 172 KKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPS----EAGDREIEEIFW 247 (455)
Q Consensus 172 ~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~----~~~~~~i~~~L~ 247 (455)
|.+|..|+||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.... ...+.+++++|+
T Consensus 215 ------N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA------dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL 282 (437)
T PHA02795 215 ------NQLDAGGRTLLYRAIYAGYIDLVSWLLENGA------NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILL 282 (437)
T ss_pred ------CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999999999975431 234679999999
Q ss_pred Hhccc
Q 012836 248 SAGAM 252 (455)
Q Consensus 248 ~~ga~ 252 (455)
++|+.
T Consensus 283 ~~gad 287 (437)
T PHA02795 283 REPLS 287 (437)
T ss_pred hCCCC
Confidence 99884
No 37
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=5.3e-27 Score=246.55 Aligned_cols=237 Identities=29% Similarity=0.365 Sum_probs=207.0
Q ss_pred ccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHH
Q 012836 3 SYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMH 82 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 82 (455)
.-+..+.++||.++..|+.+....+...++..... ...+.||+|.|+..|..+.++.+++.+.+ .+..+..|.||||
T Consensus 336 aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a--~~k~~~pl~la~~~g~~~~v~Lll~~ga~-~~~~gk~gvTplh 412 (1143)
T KOG4177|consen 336 AARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQA--EEKGFTPLHLAVKSGRVSVVELLLEAGAD-PNSAGKNGVTPLH 412 (1143)
T ss_pred ccCcCCcccccHhhhhhhHHHHHHhhccccccCcc--cccCCcchhhhcccCchhHHHhhhhccCC-cccCCCCCcceee
Confidence 34567889999999999999777777766554333 23599999999999999999999999988 7888999999999
Q ss_pred HHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC-CHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHH
Q 012836 83 MASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG-RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVV 161 (455)
Q Consensus 83 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v 161 (455)
.|+..++.++++.+++++++. +.++..|.||+|+|+..| +.++...+++. +.+++.....|.||||.|+..|+.+++
T Consensus 413 ~aa~~~~~~~v~l~l~~gA~~-~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~-g~~~n~~s~~G~T~Lhlaaq~Gh~~~~ 490 (1143)
T KOG4177|consen 413 VAAHYGNPRVVKLLLKRGASP-NAKAKLGYTPLHVAAKKGRYLQIARLLLQY-GADPNAVSKQGFTPLHLAAQEGHTEVV 490 (1143)
T ss_pred ehhhccCcceEEEEeccCCCh-hhHhhcCCChhhhhhhcccHhhhhhhHhhc-CCCcchhccccCcchhhhhccCCchHH
Confidence 999999999999999999998 889999999999999999 77777666664 999999999999999999999999999
Q ss_pred HHHHHHhhhhcc---------------------------cccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCc
Q 012836 162 RALVDWIRDVKK---------------------------ENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGL 214 (455)
Q Consensus 162 ~~Ll~~g~~~~~---------------------------~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v 214 (455)
+.+++.++.... +...+.++..|.||||.|+..|+.++|++|+++|+
T Consensus 491 ~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gA------ 564 (1143)
T KOG4177|consen 491 QLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGA------ 564 (1143)
T ss_pred HHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCc------
Confidence 999886532211 22357788999999999999999999999999999
Q ss_pred cccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccccc
Q 012836 215 EVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRM 254 (455)
Q Consensus 215 ~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~ 254 (455)
+++.+++.|+||||.|+. .++.+|+++|.++||...
T Consensus 565 dv~ak~~~G~TPLH~Aa~----~G~~~i~~LLlk~GA~vn 600 (1143)
T KOG4177|consen 565 DVNAKDKLGYTPLHQAAQ----QGHNDIAELLLKHGASVN 600 (1143)
T ss_pred cccccCCCCCChhhHHHH----cChHHHHHHHHHcCCCCC
Confidence 899999999999999974 479999999999999654
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.6e-25 Score=217.21 Aligned_cols=214 Identities=13% Similarity=0.065 Sum_probs=178.2
Q ss_pred HHHHcCCHHHHHHHHhcCCcccC----CCCCCCCChHHHHHHH--cCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHc
Q 012836 14 AAALTGDVQTLQQLFVENPLILH----TPAFASAGNPLHVASA--YGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASAN 87 (455)
Q Consensus 14 ~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 87 (455)
.|+..+..|.++.|+.++..... -....+++|+||.|+. .|+.++|++|+++|+++ +. .++.||||.|+..
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI-n~--~~~~t~lh~A~~~ 159 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI-YK--IECLNAYFRGICK 159 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCC-CC--CCCCCHHHHHHHc
Confidence 78899999999999999987540 0123459999999999 99999999999999985 33 3568999999999
Q ss_pred CCHHHHHHHHhcCccccccC-----CCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHH
Q 012836 88 GQIDVVRGLMKFDQKLCHLQ-----GPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVR 162 (455)
Q Consensus 88 g~~~iv~~Ll~~~~~~~~~~-----d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~ 162 (455)
|+.+++++|+++|++..+.. +..+.+|+|.|+..++.+++++|+++ |++++..|..|+||||+|+..|+.++++
T Consensus 160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~kD~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQLDAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999997543332 23478999999999999999999997 8999999999999999999999999999
Q ss_pred HHHHHhhhhcccccccccCCCCCcHHHHHHhcCC--------hHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCC
Q 012836 163 ALVDWIRDVKKENILNMKDKQGNTALHLATWKRE--------CQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFP 234 (455)
Q Consensus 163 ~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~--------~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~ 234 (455)
+|+++|+++ +.+|..|+||||+|+..|+ .+++++|+++|+ +++.... |.+..
T Consensus 239 lLL~~GAdI------N~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga------dI~~~~~---~~~~~----- 298 (437)
T PHA02795 239 WLLENGANV------NAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL------SIDCIKL---AILNN----- 298 (437)
T ss_pred HHHHCCCCC------CCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC------CCCchhH---Hhhhc-----
Confidence 999999998 9999999999999999984 699999999998 5554332 22111
Q ss_pred CCcCchhHHHHHHHhccc
Q 012836 235 SEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 235 ~~~~~~~i~~~L~~~ga~ 252 (455)
.....++++.+++++..
T Consensus 299 -~~~n~~~ik~lI~y~~~ 315 (437)
T PHA02795 299 -TIENHDVIKLCIKYFMM 315 (437)
T ss_pred -ccchHHHHHHHHHHHHh
Confidence 11256788888887763
No 39
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93 E-value=1.9e-25 Score=238.97 Aligned_cols=228 Identities=20% Similarity=0.186 Sum_probs=179.1
Q ss_pred cccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHH-HHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHH
Q 012836 6 TRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLH-VASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMA 84 (455)
Q Consensus 6 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 84 (455)
+.++++|+.|++.||.+.++.++++.+.......+..|.|||| .|+..++.++++.|++.+. .+..|.||||.|
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A 89 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAI 89 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHH
Confidence 4567899999999999999999998443333334446999999 8899999999999999876 477899999999
Q ss_pred HHcC---CHHHHHHHHhcCccc---------cccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccc----------
Q 012836 85 SANG---QIDVVRGLMKFDQKL---------CHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVS---------- 142 (455)
Q Consensus 85 a~~g---~~~iv~~Ll~~~~~~---------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~---------- 142 (455)
+..+ ...+++.+.+.+.+. ....+..|.||||+|+..|+.++++.|+++ |++++..+
T Consensus 90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~ 168 (743)
T TIGR00870 90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQG 168 (743)
T ss_pred HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCC
Confidence 8732 223444444443221 112235699999999999999999999997 77777532
Q ss_pred ----cCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcC---------ChHHHHHHHhcCCC
Q 012836 143 ----VQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKR---------ECQVVELLLSHGAN 209 (455)
Q Consensus 143 ----~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~---------~~~iv~~Ll~~ga~ 209 (455)
..|+||||.|+..|+.+++++|+++|+++ +.+|..|+||||+|+..+ ...+.+++++.++.
T Consensus 169 ~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi------n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 169 VDSFYHGESPLNAAACLGSPSIVALLSEDPADI------LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred CCcccccccHHHHHHHhCCHHHHHHHhcCCcch------hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999999877 899999999999999886 23466777777663
Q ss_pred CCCCccc----cccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccc
Q 012836 210 ASGGLEV----NATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 210 ~~~~v~~----~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~ 252 (455)
.. +. +..|++|.||||+|. ..++.+++++|++.+..
T Consensus 243 ~~---~~~el~~i~N~~g~TPL~~A~----~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 243 LR---DSKELEVILNHQGLTPLKLAA----KEGRIVLFRLKLAIKYK 282 (743)
T ss_pred cC---ChHhhhhhcCCCCCCchhhhh----hcCCccHHHHHHHHHHh
Confidence 21 23 678999999999995 45788999999986554
No 40
>PHA02730 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.5e-24 Score=220.17 Aligned_cols=219 Identities=19% Similarity=0.209 Sum_probs=178.1
Q ss_pred HHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHH--HHHcCCHHHHHHHHH-----------------------------
Q 012836 16 ALTGDVQTLQQLFVENPLILHTPAFASAGNPLHV--ASAYGHVDFVKEIIR----------------------------- 64 (455)
Q Consensus 16 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~--A~~~g~~~~v~~Ll~----------------------------- 64 (455)
..+++.|+++.|++.|.+++.... .|+||||+ |+..|+.|+|+.|++
T Consensus 210 ~~~n~~eiv~lLIs~GadIN~kd~--~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (672)
T PHA02730 210 SESLSKDVIKCLIDNNVSIHGRDE--GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFR 287 (672)
T ss_pred hhccCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhh
Confidence 456899999999999988765543 69999995 556678999999999
Q ss_pred ---cCCcchhh--------------------hcCCCCc---------------------HHHHHHHcC---CHHHHHHHH
Q 012836 65 ---LKPDFAKE--------------------VNQDGFS---------------------PMHMASANG---QIDVVRGLM 97 (455)
Q Consensus 65 ---~~~~~~~~--------------------~~~~g~t---------------------pLh~Aa~~g---~~~iv~~Ll 97 (455)
.+.+. .. .+..|.+ .||.=...+ +.+++++|+
T Consensus 288 ~~~~~~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLI 366 (672)
T PHA02730 288 VTPYNVDM-EIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCML 366 (672)
T ss_pred cccCCcch-HHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHH
Confidence 34332 12 4556654 566666655 689999999
Q ss_pred hcCccccccCCCCCCCHHHHHHHhCC----HHHHHHHHHhcC-ccccccccCCCcHHHH---HHHcC---------CHHH
Q 012836 98 KFDQKLCHLQGPERKTPLHFAAIKGR----VDVVSEMLSAYG-ECAEDVSVQRETVLHL---AVKNN---------QFEV 160 (455)
Q Consensus 98 ~~~~~~~~~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~~~-~~~~~~~~~g~t~Lh~---A~~~~---------~~~~ 160 (455)
++|+++ +.. ..|.||||+|+..++ .+++++|+++.+ .+++..|.+|+||||. |...+ ..++
T Consensus 367 s~GAdI-N~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~i 444 (672)
T PHA02730 367 DNGATM-DKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDV 444 (672)
T ss_pred HCCCCC-CcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHH
Confidence 999998 554 789999999999885 899999999833 2688899999999994 33232 2357
Q ss_pred HHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCC-CCCCHHHHHhhCCCCcCc
Q 012836 161 VRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNH-SGLTALDVLLSFPSEAGD 239 (455)
Q Consensus 161 v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~-~g~t~l~~a~~~~~~~~~ 239 (455)
+++|+++|+++ |.+|..|+||||+|+..++.+++++|+++|+ +++.+|+ .|.||+|.|... ..+.
T Consensus 445 vk~LIs~GADI------NakD~~G~TPLh~Aa~~~~~eive~LI~~GA------dIN~~d~~~g~TaL~~Aa~~--~~~~ 510 (672)
T PHA02730 445 FDILSKYMDDI------DMIDNENKTLLYYAVDVNNIQFARRLLEYGA------SVNTTSRSIINTAIQKSSYR--RENK 510 (672)
T ss_pred HHHHHhcccch------hccCCCCCCHHHHHHHhCCHHHHHHHHHCCC------CCCCCCCcCCcCHHHHHHHh--hcCc
Confidence 99999999997 9999999999999999999999999999999 8999997 599999999531 2357
Q ss_pred hhHHHHHHHhcccc
Q 012836 240 REIEEIFWSAGAMR 253 (455)
Q Consensus 240 ~~i~~~L~~~ga~~ 253 (455)
.+++++|+++|+..
T Consensus 511 ~eIv~~LLs~ga~i 524 (672)
T PHA02730 511 TKLVDLLLSYHPTL 524 (672)
T ss_pred HHHHHHHHHcCCCH
Confidence 89999999999854
No 41
>PHA02792 ankyrin-like protein; Provisional
Probab=99.93 E-value=4.9e-25 Score=221.33 Aligned_cols=234 Identities=14% Similarity=0.113 Sum_probs=173.8
Q ss_pred CcccCHHHHHHHH-cCCHHHHHHHHhcCCcccC----------------------------------CCCCCCCChHHHH
Q 012836 5 STRMDRRLIAAAL-TGDVQTLQQLFVENPLILH----------------------------------TPAFASAGNPLHV 49 (455)
Q Consensus 5 ~~~~~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~----------------------------------~~~~~~g~t~Lh~ 49 (455)
+..++++++.|+. .|+.|+++.|++.|.+... ...+..|.||||+
T Consensus 102 ~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~ 181 (631)
T PHA02792 102 KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYY 181 (631)
T ss_pred cCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHH
Confidence 4457788888865 5888888888888754110 0112238888888
Q ss_pred HHHcC-------CHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcC--CHHHHHHHHhcCcc------------------
Q 012836 50 ASAYG-------HVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANG--QIDVVRGLMKFDQK------------------ 102 (455)
Q Consensus 50 A~~~g-------~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~~------------------ 102 (455)
|+..+ +.|+++.|++++.+ .+..|..|.||||+|+.+. +.|+++.|++..-+
T Consensus 182 ~i~~~s~~~~~~~~~v~k~Li~~g~~-~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~ 260 (631)
T PHA02792 182 YIITRSQDGYATSLDVINYLISHEKE-MRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRN 260 (631)
T ss_pred HHhhCCcccccCCHHHHHHHHhCCCC-cCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhcc
Confidence 88888 78888888888887 4556778888888888888 66777766652100
Q ss_pred ----c------------------------------------------------------------------cccCCCCCC
Q 012836 103 ----L------------------------------------------------------------------CHLQGPERK 112 (455)
Q Consensus 103 ----~------------------------------------------------------------------~~~~d~~g~ 112 (455)
+ .........
T Consensus 261 ~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~ 340 (631)
T PHA02792 261 KNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYRFKHI 340 (631)
T ss_pred CccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccccCCcc
Confidence 0 000011244
Q ss_pred CHHHHHHHhCCHHHHHHHHHhcCccccccccCC--CcHHHHHHHcCCH---HHHHHHHHHhhhhcccccccccCCCCCcH
Q 012836 113 TPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQR--ETVLHLAVKNNQF---EVVRALVDWIRDVKKENILNMKDKQGNTA 187 (455)
Q Consensus 113 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g--~t~Lh~A~~~~~~---~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~ 187 (455)
.++|.|+..|+.+++++|+++ |++++..|.+| .||||+|+..... +++++++++|+++ |.+|..|.||
T Consensus 341 n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI------N~kD~~G~TP 413 (631)
T PHA02792 341 NKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI------NKIDKHGRSI 413 (631)
T ss_pred hHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc------ccccccCcch
Confidence 567788888899999888887 88888887764 5888887776654 3578888888887 9999999999
Q ss_pred HHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCC------cCchhHHHHHHHhccc
Q 012836 188 LHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSE------AGDREIEEIFWSAGAM 252 (455)
Q Consensus 188 Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~------~~~~~i~~~L~~~ga~ 252 (455)
||+|+..++.+++++|+++|+ +++.+|..|.|||++|...... ....+++++|+++|..
T Consensus 414 Lh~Aa~~~n~eivelLLs~GA------DIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~ 478 (631)
T PHA02792 414 LYYCIESHSVSLVEWLIDNGA------DINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPT 478 (631)
T ss_pred HHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999 8999999999999999642111 2234578888887764
No 42
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=1.4e-24 Score=233.83 Aligned_cols=172 Identities=22% Similarity=0.343 Sum_probs=159.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC
Q 012836 43 AGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG 122 (455)
Q Consensus 43 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 122 (455)
+.++||.||..|+.++++.|++.+.+ ++..|..|.||||+||..|+.++++.|+++++++ +.+|.+|.||||.|+..|
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A~~~g 602 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNAISAK 602 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHHhC
Confidence 67999999999999999999999988 5788999999999999999999999999999998 889999999999999999
Q ss_pred CHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHH
Q 012836 123 RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVEL 202 (455)
Q Consensus 123 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~ 202 (455)
+.++++.|+.. +...+ ...+.++||.|+.+|+.+++++|+++|+++ |.+|.+|+||||+|+..|+.+++++
T Consensus 603 ~~~iv~~L~~~-~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi------n~~d~~G~TpLh~A~~~g~~~iv~~ 673 (823)
T PLN03192 603 HHKIFRILYHF-ASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNV------DSEDHQGATALQVAMAEDHVDMVRL 673 (823)
T ss_pred CHHHHHHHHhc-CcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHCCcHHHHHH
Confidence 99999999975 44333 346779999999999999999999999987 9999999999999999999999999
Q ss_pred HHhcCCCCCCCccccccCCCC-CCHHHHHh
Q 012836 203 LLSHGANASGGLEVNATNHSG-LTALDVLL 231 (455)
Q Consensus 203 Ll~~ga~~~~~v~~~~~n~~g-~t~l~~a~ 231 (455)
|+++|+ +++..|..| .||++++.
T Consensus 674 Ll~~GA------dv~~~~~~g~~t~~~l~~ 697 (823)
T PLN03192 674 LIMNGA------DVDKANTDDDFSPTELRE 697 (823)
T ss_pred HHHcCC------CCCCCCCCCCCCHHHHHH
Confidence 999999 889999988 99998874
No 43
>PHA02730 ankyrin-like protein; Provisional
Probab=99.93 E-value=2.4e-24 Score=218.61 Aligned_cols=194 Identities=13% Similarity=0.087 Sum_probs=156.8
Q ss_pred ccCcccCHHHHHHHHcC---CHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCcc-hhhhcCC
Q 012836 3 SYSTRMDRRLIAAALTG---DVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG--HVDFVKEIIRLKPDF-AKEVNQD 76 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~-~~~~~~~ 76 (455)
..+..|+|+||.|+..| +.++++.|+++|++.... +..|.||||+|+..| +.|+|++|++.+.+. .+..+..
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~k--D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~ 113 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCR--NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNI 113 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCccc--CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccccc
Confidence 45678999999999997 599999999999887655 346999999999977 799999999996531 2445667
Q ss_pred CCcHHHHHHH--cCCHHHHHHHHh-cCcccccc---CC-CCCCCHHHHHHHhCCHHHHHHHHHhcCcccc-------ccc
Q 012836 77 GFSPMHMASA--NGQIDVVRGLMK-FDQKLCHL---QG-PERKTPLHFAAIKGRVDVVSEMLSAYGECAE-------DVS 142 (455)
Q Consensus 77 g~tpLh~Aa~--~g~~~iv~~Ll~-~~~~~~~~---~d-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~-------~~~ 142 (455)
+.+|||.++. +++.+++++|++ .+.++... ++ ..|.+|+++|...++.|++++|++. |++.+ ..+
T Consensus 114 ~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~-g~~v~g~~~~~~~~~ 192 (672)
T PHA02730 114 NDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS-ECYSTGYVFRSCMYD 192 (672)
T ss_pred CCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc-CCccccccccccccc
Confidence 8999999988 999999999996 44454222 12 3789999999999999999999998 77664 123
Q ss_pred cC-CCcHHHHH------HHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHH--HHhcCChHHHHHHHh
Q 012836 143 VQ-RETVLHLA------VKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHL--ATWKRECQVVELLLS 205 (455)
Q Consensus 143 ~~-g~t~Lh~A------~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~--A~~~~~~~iv~~Ll~ 205 (455)
.. +.|.||+. ..+++.|++++|+++|+++ |.+|.+|.||||+ |...++.|++++|++
T Consensus 193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadI------N~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSI------HGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 33 34566643 4557899999999999998 9999999999995 555677999999999
No 44
>PF13962 PGG: Domain of unknown function
Probab=99.92 E-value=1.7e-25 Score=180.29 Aligned_cols=101 Identities=32% Similarity=0.561 Sum_probs=84.7
Q ss_pred CCCccchhhHHHHHHHHHHHHHhhhcccCCCccccccCCCCCCCCCCCCCCCCCCccccccCCCccchhhhhhhhHHHHH
Q 012836 299 RDSPGETLSALLVVAVLVATTTFQFGVNPPGGVWQEYYKPDRKNGTTSGKAYSAGQSILGSTDPVGFGIFIFFNSVGFSL 378 (455)
Q Consensus 299 ~~~~~~t~~s~~vVA~LIaTVtFaA~ft~PGG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~F~~~n~~af~~ 378 (455)
+||+++++++++|||+|||||||||+||||||+||++. ..|+|++. .++..|++|+++|++||++
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~--------------~~G~~il~-~~~~~f~~F~~~nt~af~~ 65 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDD--------------DAGTPILA-KKPSAFKAFLISNTIAFFS 65 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc--------------CCCCchhc-cccchhhhHHHHHHHHHHH
Confidence 46889999999999999999999999999999999841 26999953 4555999999999999999
Q ss_pred HHHHHHHHhcCC------------cchhHHHHHHHHHHHHHHHheeee
Q 012836 379 SIEMIRILTTNF------------PLQLELQLCFFAMYVTYTNAVITI 414 (455)
Q Consensus 379 S~~~i~~~~~~~------------~~~~~~~~~~~~m~~~~~~~~~~~ 414 (455)
|++++++++++. +....+++++.+|++||++|++++
T Consensus 66 S~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 66 SLAAIFLLISGLDDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999998888533 111346888999999999998753
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=1.1e-24 Score=184.97 Aligned_cols=224 Identities=27% Similarity=0.307 Sum_probs=197.3
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHH
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMA 84 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 84 (455)
+..|+..+-.+.+.|+.+.+.....-+++.+...+.. |..++|.|+-+|+.+.+..++.++.. .++.+.-+++|+.++
T Consensus 59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~-g~~~~~v~ap~~s~~k~sttltN~~r-gnevs~~p~s~~sls 136 (296)
T KOG0502|consen 59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPE-GWSALLVAAPCGSVDKVSTTLTNGAR-GNEVSLMPWSPLSLS 136 (296)
T ss_pred HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCch-hhhhhhhcCCCCCcceeeeeeccccc-CCccccccCChhhHH
Confidence 4456777778899999999999988888777666654 99999999999999999999998877 577888999999999
Q ss_pred HHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHH
Q 012836 85 SANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRAL 164 (455)
Q Consensus 85 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L 164 (455)
+..-+.+.+..+.+. ..+..|+.|.|||.+|+..|++++|++||+. |++++...+..+++|.+|++.|..+++++|
T Consensus 137 Vhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~-GAdp~~lgk~resALsLAt~ggytdiV~lL 212 (296)
T KOG0502|consen 137 VHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFLLNS-GADPDALGKYRESALSLATRGGYTDIVELL 212 (296)
T ss_pred HHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHHHHc-CCChhhhhhhhhhhHhHHhcCChHHHHHHH
Confidence 998888888777653 3477999999999999999999999999997 999999999999999999999999999999
Q ss_pred HHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHH
Q 012836 165 VDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEE 244 (455)
Q Consensus 165 l~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~ 244 (455)
++++.++ |..|-+|.|||-+|++.++.++++.|++.|+ +++..+..|++++++|+.. ++. +++
T Consensus 213 L~r~vdV------NvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA------d~t~e~dsGy~~mdlAVal----Gyr-~Vq 275 (296)
T KOG0502|consen 213 LTREVDV------NVYDWNGGTPLLYAVRGNHVKCVESLLNSGA------DVTQEDDSGYWIMDLAVAL----GYR-IVQ 275 (296)
T ss_pred HhcCCCc------ceeccCCCceeeeeecCChHHHHHHHHhcCC------CcccccccCCcHHHHHHHh----hhH-HHH
Confidence 9988887 9999999999999999999999999999999 8999999999999999754 444 555
Q ss_pred HHHHhcc
Q 012836 245 IFWSAGA 251 (455)
Q Consensus 245 ~L~~~ga 251 (455)
..++..+
T Consensus 276 qvie~h~ 282 (296)
T KOG0502|consen 276 QVIEKHA 282 (296)
T ss_pred HHHHHHH
Confidence 5555444
No 46
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91 E-value=2.6e-24 Score=212.34 Aligned_cols=223 Identities=28% Similarity=0.342 Sum_probs=191.9
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHH
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMA 84 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 84 (455)
|-.+.|.||.|+.+|+.+.++.|++..+...... ..|.+|||+|++.|+.|+++.++.+.. ..+..+..|.||||.|
T Consensus 46 d~~gfTalhha~Lng~~~is~llle~ea~ldl~d--~kg~~plhlaaw~g~~e~vkmll~q~d-~~na~~~e~~tplhla 122 (854)
T KOG0507|consen 46 DYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCD--TKGILPLHLAAWNGNLEIVKMLLLQTD-ILNAVNIENETPLHLA 122 (854)
T ss_pred CccchhHHHHHHhcCchHHHHHHhcchhhhhhhh--ccCcceEEehhhcCcchHHHHHHhccc-CCCcccccCcCccchh
Confidence 4468899999999999999999999877654443 459999999999999999999999984 4688899999999999
Q ss_pred HHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccc--------cccccCCCcHHHHHHHcC
Q 012836 85 SANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECA--------EDVSVQRETVLHLAVKNN 156 (455)
Q Consensus 85 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~t~Lh~A~~~~ 156 (455)
++.||.+++.+|+.++++. ..+|+.+.|+|..|++.|..++++.|++. .-+. ...+..+-+|||.|+++|
T Consensus 123 aqhgh~dvv~~Ll~~~adp-~i~nns~~t~ldlA~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHlaakng 200 (854)
T KOG0507|consen 123 AQHGHLEVVFYLLKKNADP-FIRNNSKETVLDLASRFGRAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNG 200 (854)
T ss_pred hhhcchHHHHHHHhcCCCc-cccCcccccHHHHHHHhhhhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchhhhcc
Confidence 9999999999999999998 78999999999999999999999999986 2111 123446779999999999
Q ss_pred CHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCC
Q 012836 157 QFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSE 236 (455)
Q Consensus 157 ~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~ 236 (455)
+.++++.|++.|.++ |...+.| |+||-|+..|..+++.+|++.|. +..++|..|+|+|++...++.
T Consensus 201 h~~~~~~ll~ag~di------n~~t~~g-talheaalcgk~evvr~ll~~gi------n~h~~n~~~qtaldil~d~~~- 266 (854)
T KOG0507|consen 201 HVECMQALLEAGFDI------NYTTEDG-TALHEAALCGKAEVVRFLLEIGI------NTHIKNQHGQTALDIIIDLQE- 266 (854)
T ss_pred hHHHHHHHHhcCCCc------ccccccc-hhhhhHhhcCcchhhhHHHhhcc------ccccccccchHHHHHHHhcch-
Confidence 999999999999887 7766666 99999999999999999999987 889999999999999987653
Q ss_pred cCchhHHHHH
Q 012836 237 AGDREIEEIF 246 (455)
Q Consensus 237 ~~~~~i~~~L 246 (455)
....++.-.+
T Consensus 267 ~~~~ei~ga~ 276 (854)
T KOG0507|consen 267 NRRYEIAGAV 276 (854)
T ss_pred hhhhhhhhhh
Confidence 3334444333
No 47
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91 E-value=2e-23 Score=224.77 Aligned_cols=176 Identities=20% Similarity=0.223 Sum_probs=157.9
Q ss_pred cccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHH
Q 012836 6 TRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMAS 85 (455)
Q Consensus 6 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa 85 (455)
..+.++||.||..|+.+.++.|++.+.+.+.. +..|.||||+|+..|+.++++.|++++.+ ++.+|.+|+||||+|+
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~--d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~ 599 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAKLDPDIG--DSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAI 599 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHH
Confidence 35679999999999999999999998776543 34699999999999999999999999987 6778999999999999
Q ss_pred HcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHH
Q 012836 86 ANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALV 165 (455)
Q Consensus 86 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll 165 (455)
..|+.+++++|++.+... ....+.++||.|+..|+.++++.|+++ |.+++..|.+|+||||+|+..|+.+++++|+
T Consensus 600 ~~g~~~iv~~L~~~~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 675 (823)
T PLN03192 600 SAKHHKIFRILYHFASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAMAEDHVDMVRLLI 675 (823)
T ss_pred HhCCHHHHHHHHhcCccc---CcccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence 999999999999876554 345678999999999999999999987 8999999999999999999999999999999
Q ss_pred HHhhhhcccccccccCCCC-CcHHHHHHhc
Q 012836 166 DWIRDVKKENILNMKDKQG-NTALHLATWK 194 (455)
Q Consensus 166 ~~g~~~~~~~~~~~~d~~G-~T~Lh~A~~~ 194 (455)
++|+++ +..|..| .||++++...
T Consensus 676 ~~GAdv------~~~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 676 MNGADV------DKANTDDDFSPTELRELL 699 (823)
T ss_pred HcCCCC------CCCCCCCCCCHHHHHHHH
Confidence 999987 8888888 8999888543
No 48
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91 E-value=6.8e-24 Score=209.40 Aligned_cols=232 Identities=26% Similarity=0.282 Sum_probs=195.3
Q ss_pred cCHHHHHHHHcCCHHHHHHHHhcCCc-----------ccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCC
Q 012836 8 MDRRLIAAALTGDVQTLQQLFVENPL-----------ILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQD 76 (455)
Q Consensus 8 ~~t~L~~A~~~g~~~~v~~Ll~~~~~-----------~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 76 (455)
.++-|..|+..||.+.+..||+.... ......+..|.|+||.|+.+|+.++++.|++..+- ....|..
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~k 81 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDTK 81 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhcc
Confidence 45779999999999999999985311 12222333599999999999999999999998875 5666799
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcC
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNN 156 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~ 156 (455)
|.+|||+|+-.|+.++++.|+.++... +..+..|.||||.|+..||.+++.+|+.+ ++++...|..++|+|.+|++.|
T Consensus 82 g~~plhlaaw~g~~e~vkmll~q~d~~-na~~~e~~tplhlaaqhgh~dvv~~Ll~~-~adp~i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 82 GILPLHLAAWNGNLEIVKMLLLQTDIL-NAVNIENETPLHLAAQHGHLEVVFYLLKK-NADPFIRNNSKETVLDLASRFG 159 (854)
T ss_pred CcceEEehhhcCcchHHHHHHhcccCC-CcccccCcCccchhhhhcchHHHHHHHhc-CCCccccCcccccHHHHHHHhh
Confidence 999999999999999999999999544 88999999999999999999999999997 8999999999999999999999
Q ss_pred CHHHHHHHHHHhhhhccccc--ccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCC
Q 012836 157 QFEVVRALVDWIRDVKKENI--LNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFP 234 (455)
Q Consensus 157 ~~~~v~~Ll~~g~~~~~~~~--~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~ 234 (455)
..++++.|++..-....... -..++..+-+|||+|+++|+.++++.|++.|. ++|...++| |+||.|.
T Consensus 160 r~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~------din~~t~~g-talheaa--- 229 (854)
T KOG0507|consen 160 RAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF------DINYTTEDG-TALHEAA--- 229 (854)
T ss_pred hhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC------Ccccccccc-hhhhhHh---
Confidence 99999999986211111000 23456778899999999999999999999998 788877765 8899985
Q ss_pred CCcCchhHHHHHHHhcccc
Q 012836 235 SEAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 235 ~~~~~~~i~~~L~~~ga~~ 253 (455)
..+..+++.+|++.|...
T Consensus 230 -lcgk~evvr~ll~~gin~ 247 (854)
T KOG0507|consen 230 -LCGKAEVVRFLLEIGINT 247 (854)
T ss_pred -hcCcchhhhHHHhhcccc
Confidence 447889999999999854
No 49
>PHA02792 ankyrin-like protein; Provisional
Probab=99.90 E-value=1.5e-22 Score=203.53 Aligned_cols=242 Identities=13% Similarity=0.074 Sum_probs=191.6
Q ss_pred ccCHHHHH-HHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHH-cCCHHHHHHHHHcCCcc---------------
Q 012836 7 RMDRRLIA-AALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASA-YGHVDFVKEIIRLKPDF--------------- 69 (455)
Q Consensus 7 ~~~t~L~~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~~~~~--------------- 69 (455)
.+..++|. |...|+.|+++.|+++|++++.... .+.||||+|+. .++.|++++|+++|++.
T Consensus 70 ~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n--~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~ 147 (631)
T PHA02792 70 NDFDIFEYLCSDNIDIELLKLLISKGLEINSIKN--GINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQI 147 (631)
T ss_pred CCccHHHHHHHhcccHHHHHHHHHcCCCcccccC--CCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhc
Confidence 45556755 4567899999999999998875543 48899999965 69999999999999641
Q ss_pred --------------------hhhhcCCCCcHHHHHHHcC-------CHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC
Q 012836 70 --------------------AKEVNQDGFSPMHMASANG-------QIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG 122 (455)
Q Consensus 70 --------------------~~~~~~~g~tpLh~Aa~~g-------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 122 (455)
.+..|..|.||||+|+.++ +.++++.|+++|++. +..|..|.||||+|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~~ 226 (631)
T PHA02792 148 TRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDKC 226 (631)
T ss_pred ccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHcc
Confidence 1244667999999999999 899999999999998 778999999999999998
Q ss_pred --CHHHHHHHHHhcCc---------------------ccc----------------------------------------
Q 012836 123 --RVDVVSEMLSAYGE---------------------CAE---------------------------------------- 139 (455)
Q Consensus 123 --~~~~v~~Ll~~~~~---------------------~~~---------------------------------------- 139 (455)
+.|+++.|++..-. .++
T Consensus 227 ~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (631)
T PHA02792 227 DIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSI 306 (631)
T ss_pred cchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHH
Confidence 78888887763110 000
Q ss_pred ---------------------------ccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCC--CcHHHH
Q 012836 140 ---------------------------DVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQG--NTALHL 190 (455)
Q Consensus 140 ---------------------------~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G--~T~Lh~ 190 (455)
.......++++.|+..|+.+++++|+++|+++ +.+|.+| .||||+
T Consensus 307 q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADI------N~kD~~g~~~TpLh~ 380 (631)
T PHA02792 307 QDLLSEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVV------VEDDDNIINIMPLFP 380 (631)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCch------hhhcCCCCChhHHHH
Confidence 00001245688899999999999999999997 8888775 699999
Q ss_pred HHhcCCh---HHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCCCCC
Q 012836 191 ATWKREC---QVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRSPEP 267 (455)
Q Consensus 191 A~~~~~~---~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 267 (455)
|+..... +++++|+++|+ ++|.+|..|.||||+|.. .++.+++++|+++|+.. ..++.
T Consensus 381 A~~n~~~~v~~IlklLIs~GA------DIN~kD~~G~TPLh~Aa~----~~n~eivelLLs~GADI---------N~kD~ 441 (631)
T PHA02792 381 TLSIHESDVLSILKLCKPYID------DINKIDKHGRSILYYCIE----SHSVSLVEWLIDNGADI---------NITTK 441 (631)
T ss_pred HHHhccHhHHHHHHHHHhcCC------ccccccccCcchHHHHHH----cCCHHHHHHHHHCCCCC---------CCcCC
Confidence 8876654 46888999999 899999999999999964 47889999999999853 33455
Q ss_pred CCCCccccc
Q 012836 268 HGQTSVDNC 276 (455)
Q Consensus 268 ~~~~~~~~~ 276 (455)
.|.+++...
T Consensus 442 ~G~TpL~~A 450 (631)
T PHA02792 442 YGSTCIGIC 450 (631)
T ss_pred CCCCHHHHH
Confidence 667765543
No 50
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.90 E-value=2.5e-23 Score=198.85 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=174.6
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCC
Q 012836 10 RRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQ 89 (455)
Q Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~ 89 (455)
-.++.|++.||.+.+..|+..+...+.. +.+|.|+||-+|...+.+||++|++.+++ ++..|..||||||.|+..|+
T Consensus 42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~--n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~ 118 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLNRGASPNLC--NVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAAASCGY 118 (527)
T ss_pred HHHHhccccccHHHHHHHhccCCCcccc--CCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhhccccc
Confidence 4588999999999999999988665332 23599999999999999999999999998 68889999999999999999
Q ss_pred HHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHH--------------------------HHHHhcCcccccccc
Q 012836 90 IDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVS--------------------------EMLSAYGECAEDVSV 143 (455)
Q Consensus 90 ~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~--------------------------~Ll~~~~~~~~~~~~ 143 (455)
..++++|+.+++++ ...+.+|..|+..+...-..++.. ..+. .|...+..+.
T Consensus 119 ~~i~~~li~~gA~~-~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~-~G~~~d~~~~ 196 (527)
T KOG0505|consen 119 LNIVEYLIQHGANL-LAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN-AGAELDARHA 196 (527)
T ss_pred HHHHHHHHHhhhhh-hhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh-cccccccccc
Confidence 99999999999998 556677777766543222222211 2222 3666666777
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCC
Q 012836 144 QRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSG 223 (455)
Q Consensus 144 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g 223 (455)
.|.|.||+|+.+|..++.++|++.|.++ +.+|.+|+||||.|+.-|+.+++++|+++|+ +.+.++..|
T Consensus 197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~------~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga------~~d~~t~~g 264 (527)
T KOG0505|consen 197 RGATALHVAAANGYTEVAALLLQAGYSV------NIKDYDGWTPLHAAAHWGQEDACELLVEHGA------DMDAKTKMG 264 (527)
T ss_pred ccchHHHHHHhhhHHHHHHHHHHhccCc------ccccccCCCcccHHHHhhhHhHHHHHHHhhc------ccchhhhcC
Confidence 7999999999999999999999999887 9999999999999999999999999999999 899999999
Q ss_pred CCHHHHHh
Q 012836 224 LTALDVLL 231 (455)
Q Consensus 224 ~t~l~~a~ 231 (455)
.||++++.
T Consensus 265 ~~p~dv~d 272 (527)
T KOG0505|consen 265 ETPLDVAD 272 (527)
T ss_pred CCCccchh
Confidence 99999994
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=4.7e-24 Score=181.29 Aligned_cols=205 Identities=22% Similarity=0.235 Sum_probs=180.6
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHH
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHM 83 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 83 (455)
.+.+|-..++.|+-.|+.+.+...+.++...+.-. ..+.+|+.+++...+.+.+..+.++. ++..|+.|.|||.+
T Consensus 92 t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs--~~p~s~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiW 166 (296)
T KOG0502|consen 92 TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVS--LMPWSPLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIW 166 (296)
T ss_pred CCchhhhhhhhcCCCCCcceeeeeecccccCCccc--cccCChhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHH
Confidence 34557788999999999999999888776554322 24889999999999998887776653 67789999999999
Q ss_pred HHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHH
Q 012836 84 ASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRA 163 (455)
Q Consensus 84 Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~ 163 (455)
|+..|++++|++|++.|+++ ........++|.+|++.|..++|+.||.+ +.++|..|-+|-|||.+|++.++.++++.
T Consensus 167 Aaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrgnhvkcve~ 244 (296)
T KOG0502|consen 167 AAAKGHIPVVQFLLNSGADP-DALGKYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRGNHVKCVES 244 (296)
T ss_pred HHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecCChHHHHHH
Confidence 99999999999999999998 77788889999999999999999999997 88999999999999999999999999999
Q ss_pred HHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHH
Q 012836 164 LVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALD 228 (455)
Q Consensus 164 Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~ 228 (455)
|++.|+++ +..|..|++++.+|+..|+. +++..+++-+ +.+.+|+.-.||+|
T Consensus 245 Ll~sGAd~------t~e~dsGy~~mdlAValGyr-~Vqqvie~h~------lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 245 LLNSGADV------TQEDDSGYWIMDLAVALGYR-IVQQVIEKHA------LKLCQDSEKRTPLH 296 (296)
T ss_pred HHhcCCCc------ccccccCCcHHHHHHHhhhH-HHHHHHHHHH------HHHhhcccCCCCCC
Confidence 99999998 89999999999999999988 8888888766 67778877777764
No 52
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89 E-value=1.8e-22 Score=216.14 Aligned_cols=214 Identities=16% Similarity=0.117 Sum_probs=160.6
Q ss_pred ccCcccCHHHH-HHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcC---CHHHHHHHHHcCCc-----ch---
Q 012836 3 SYSTRMDRRLI-AAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYG---HVDFVKEIIRLKPD-----FA--- 70 (455)
Q Consensus 3 ~~~~~~~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~-----~~--- 70 (455)
..|..|.|||| .|+..++.++++.|++.+. .+..|+||||.|+..+ ..++++.+.+..+. ..
T Consensus 47 ~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~------~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~ 120 (743)
T TIGR00870 47 CPDRLGRSALFVAAIENENLELTELLLNLSC------RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQ 120 (743)
T ss_pred CcCccchhHHHHHHHhcChHHHHHHHHhCCC------CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccc
Confidence 34678999999 8888888899999888765 2345999999998732 22333333333322 01
Q ss_pred -hhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCC--------------CCCCCHHHHHHHhCCHHHHHHHHHhcC
Q 012836 71 -KEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQG--------------PERKTPLHFAAIKGRVDVVSEMLSAYG 135 (455)
Q Consensus 71 -~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 135 (455)
...+..|.||||+||.+|+.++++.|+++|+++ +.++ ..|.+|||.|+..|+.++++.|++. |
T Consensus 121 ~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv-~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~-g 198 (743)
T TIGR00870 121 YTSEFTPGITALHLAAHRQNYEIVKLLLERGASV-PARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED-P 198 (743)
T ss_pred cccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCC-CcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC-C
Confidence 112356999999999999999999999999887 3322 3589999999999999999999987 8
Q ss_pred ccccccccCCCcHHHHHHHcC---------CHHHHHHHHHHhhhhcc-cccccccCCCCCcHHHHHHhcCChHHHHHHHh
Q 012836 136 ECAEDVSVQRETVLHLAVKNN---------QFEVVRALVDWIRDVKK-ENILNMKDKQGNTALHLATWKRECQVVELLLS 205 (455)
Q Consensus 136 ~~~~~~~~~g~t~Lh~A~~~~---------~~~~v~~Ll~~g~~~~~-~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 205 (455)
++++..|..|+||||+|+..+ ...+.+++++.++.... ..+.+..|.+|.||||+|+..|+.+++++|++
T Consensus 199 adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~ 278 (743)
T TIGR00870 199 ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA 278 (743)
T ss_pred cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHH
Confidence 899999999999999999987 23456677776655321 23346679999999999999999999999999
Q ss_pred cCCCCCCCccccccCCCCCCHHHHH
Q 012836 206 HGANASGGLEVNATNHSGLTALDVL 230 (455)
Q Consensus 206 ~ga~~~~~v~~~~~n~~g~t~l~~a 230 (455)
.+. +........+.+.+.+
T Consensus 279 ~~~------~~kk~~a~~~~~~~~~ 297 (743)
T TIGR00870 279 IKY------KQKKFVAWPNGQQLLS 297 (743)
T ss_pred HHH------hcceeeccCcchHhHh
Confidence 765 2223334455555554
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=5.2e-22 Score=180.76 Aligned_cols=164 Identities=30% Similarity=0.415 Sum_probs=145.3
Q ss_pred hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHh-----CCHHHHHHHHHhcCccccc-ccc
Q 012836 70 AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK-----GRVDVVSEMLSAYGECAED-VSV 143 (455)
Q Consensus 70 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-----g~~~~v~~Ll~~~~~~~~~-~~~ 143 (455)
++..|.+|+|+||||+.++|+++|+.||+.+...++.++.-|.||+++|+.. .+.++|..|+.- |. +|. ...
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gn-VNaKAsQ 338 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GD-VNAKASQ 338 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cC-cchhhhh
Confidence 5667999999999999999999999999999877789999999999999864 467899998875 43 443 346
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCC
Q 012836 144 QRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSG 223 (455)
Q Consensus 144 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g 223 (455)
.|+|+|++|+.+|+.++++.|+..|+|+ |.+|.+|.|+|++|+.+|+.+++++||.... +|+...|.+|
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdV------NiQDdDGSTALMCA~EHGhkEivklLLA~p~-----cd~sLtD~Dg 407 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADV------NIQDDDGSTALMCAAEHGHKEIVKLLLAVPS-----CDISLTDVDG 407 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCC------ccccCCccHHHhhhhhhChHHHHHHHhccCc-----ccceeecCCC
Confidence 7999999999999999999999999998 9999999999999999999999999998754 4899999999
Q ss_pred CCHHHHHhhCCCCcCchhHHHHHHHhc
Q 012836 224 LTALDVLLSFPSEAGDREIEEIFWSAG 250 (455)
Q Consensus 224 ~t~l~~a~~~~~~~~~~~i~~~L~~~g 250 (455)
-|+|.+|. +.++.+|.-+|..+-
T Consensus 408 STAl~IAl----eagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 408 STALSIAL----EAGHREIAVMLYAHM 430 (452)
T ss_pred chhhhhHH----hcCchHHHHHHHHHH
Confidence 99999996 458889988887653
No 54
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86 E-value=4e-21 Score=166.86 Aligned_cols=140 Identities=21% Similarity=0.259 Sum_probs=101.5
Q ss_pred hhhcCCCCcHHHHHHHcCCH----HHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHH---HHHHHHhcCccccccc-
Q 012836 71 KEVNQDGFSPMHMASANGQI----DVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDV---VSEMLSAYGECAEDVS- 142 (455)
Q Consensus 71 ~~~~~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~---v~~Ll~~~~~~~~~~~- 142 (455)
...+.++.++||.||+.|+. +++++|.+.+..+ +.+|.+|+||||+|+..|+.+. +++|++. +.+++..+
T Consensus 14 ~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Gadin~~d~ 91 (166)
T PHA02743 14 VEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-GADINAREL 91 (166)
T ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CCCCCCCCC
Confidence 44566677778888877776 4555666666655 6677778888888887776554 6667765 77777776
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHH-HhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCC
Q 012836 143 VQRETVLHLAVKNNQFEVVRALVD-WIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNH 221 (455)
Q Consensus 143 ~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~ 221 (455)
..|+||||+|+..++.+++++|++ .|+++ +.+|..|.||||+|+..++.+++++|+++|+ +++..+.
T Consensus 92 ~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~------~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga------~~~~~~~ 159 (166)
T PHA02743 92 GTGNTLLHIAASTKNYELAEWLCRQLGVNL------GAINYQHETAYHIAYKMRDRRMMEILRANGA------VCDDPLS 159 (166)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhccCCCc------cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCccc
Confidence 478888888888888888888874 56665 6778888888888888888888888888887 5666665
Q ss_pred CCC
Q 012836 222 SGL 224 (455)
Q Consensus 222 ~g~ 224 (455)
.|.
T Consensus 160 ~~~ 162 (166)
T PHA02743 160 IGL 162 (166)
T ss_pred CCc
Confidence 553
No 55
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.85 E-value=1.7e-20 Score=162.89 Aligned_cols=136 Identities=15% Similarity=0.113 Sum_probs=117.9
Q ss_pred CCChHHHHHHHcCCH----HHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHH---HHHHHhcCccccccCC-CCCCC
Q 012836 42 SAGNPLHVASAYGHV----DFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDV---VRGLMKFDQKLCHLQG-PERKT 113 (455)
Q Consensus 42 ~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~i---v~~Ll~~~~~~~~~~d-~~g~t 113 (455)
.+.++||.||+.|+. +++++|++.+.. .+..|..|+||||+|+..|+.+. +++|++.++++ +.+| ..|.|
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n~~d~~~g~T 96 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI-NARELGTGNT 96 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-CCCCCCCCCc
Confidence 477899999999998 555666776665 56778999999999999988654 89999999988 7777 58999
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCC
Q 012836 114 PLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGN 185 (455)
Q Consensus 114 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~ 185 (455)
|||+|+..|+.+++++|+...+.+++..|..|+||||+|+..++.+++++|+++|++. +.++..|.
T Consensus 97 pLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~------~~~~~~~~ 162 (166)
T PHA02743 97 LLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVC------DDPLSIGL 162 (166)
T ss_pred HHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------CCcccCCc
Confidence 9999999999999999997668999999999999999999999999999999999887 66666554
No 56
>PHA02741 hypothetical protein; Provisional
Probab=99.85 E-value=1.6e-20 Score=163.76 Aligned_cols=129 Identities=19% Similarity=0.284 Sum_probs=91.4
Q ss_pred hhcCCCCcHHHHHHHcCCHHHHHHHHhc------CccccccCCCCCCCHHHHHHHhCC----HHHHHHHHHhcCcccccc
Q 012836 72 EVNQDGFSPMHMASANGQIDVVRGLMKF------DQKLCHLQGPERKTPLHFAAIKGR----VDVVSEMLSAYGECAEDV 141 (455)
Q Consensus 72 ~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~------~~~~~~~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~~~~~~~~~ 141 (455)
..|..|.||||+|++.|+.++++.|+.. ++++ +.+|..|.||||+|+..|+ .++++.|++. +.+++..
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-gadin~~ 93 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-GADINAQ 93 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-CCCCCCC
Confidence 3456677777777777777777776532 2333 6667777777777777777 4667777765 6777776
Q ss_pred cc-CCCcHHHHHHHcCCHHHHHHHHH-HhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCC
Q 012836 142 SV-QRETVLHLAVKNNQFEVVRALVD-WIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGA 208 (455)
Q Consensus 142 ~~-~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga 208 (455)
+. +|+||||+|+..++.+++++|++ .|.++ +.+|.+|.||||+|+..++.+++++|++.++
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~------~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL------HFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC------CcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 64 77777777777777777777776 35554 6777777777777777777777777777655
No 57
>PHA02741 hypothetical protein; Provisional
Probab=99.84 E-value=2.5e-20 Score=162.55 Aligned_cols=132 Identities=20% Similarity=0.338 Sum_probs=116.9
Q ss_pred ccCCCCCCCHHHHHHHhCCHHHHHHHHHhc-----CccccccccCCCcHHHHHHHcCC----HHHHHHHHHHhhhhcccc
Q 012836 105 HLQGPERKTPLHFAAIKGRVDVVSEMLSAY-----GECAEDVSVQRETVLHLAVKNNQ----FEVVRALVDWIRDVKKEN 175 (455)
Q Consensus 105 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~~g~t~Lh~A~~~~~----~~~v~~Ll~~g~~~~~~~ 175 (455)
..+|..|.||||+|+..|+.++++.|+... +.+++..|..|+||||+|+..|+ .+++++|+++|+++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi---- 90 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI---- 90 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC----
Confidence 346788999999999999999999986532 56788899999999999999998 58999999998887
Q ss_pred cccccCC-CCCcHHHHHHhcCChHHHHHHHh-cCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccc
Q 012836 176 ILNMKDK-QGNTALHLATWKRECQVVELLLS-HGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 176 ~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~-~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~ 252 (455)
|.+|. +|+||||+|+..++.+++++|++ .|+ +++.+|.+|.|||++|.. .+..+++++|++.++.
T Consensus 91 --n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~------~~~~~n~~g~tpL~~A~~----~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 91 --NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGI------DLHFCNADNKSPFELAID----NEDVAMMQILREIVAT 157 (169)
T ss_pred --CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCcCCCCCCCHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 88885 99999999999999999999997 477 889999999999999964 4678999999998874
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1e-19 Score=170.20 Aligned_cols=149 Identities=17% Similarity=0.192 Sum_probs=127.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCcchhhh----cCCCCcHHHHHHHcCCHHHHHHHHhcCccccccC-CCCCCCHHHH
Q 012836 43 AGNPLHVASAYGHVDFVKEIIRLKPDFAKEV----NQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQ-GPERKTPLHF 117 (455)
Q Consensus 43 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~----~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~-d~~g~tpLh~ 117 (455)
..++||.|+..|+.++++.|+++|++. +.+ +..|.||||+|+..|+.+++++|+++|+++ +.+ +..|.||||.
T Consensus 33 ~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~~~~g~TpLh~ 110 (300)
T PHA02884 33 IANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYAEEAKITPLYI 110 (300)
T ss_pred CCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-CcccCCCCCCHHHH
Confidence 456788888889999999999999874 444 458999999999999999999999999998 654 5679999999
Q ss_pred HHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCCh
Q 012836 118 AAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKREC 197 (455)
Q Consensus 118 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 197 (455)
|+..|+.++++.|+.. |++++..|..|.||||+|++.++.+++..+.. +..+..+.+|++++ ++.
T Consensus 111 Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~n~ 175 (300)
T PHA02884 111 SVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMICNNFLAFMICD-----------NEISNFYKHPKKIL---INF 175 (300)
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC-----------CcccccccChhhhh---ccH
Confidence 9999999999999987 89999999999999999999888887765542 33577788899876 478
Q ss_pred HHHHHHHhcCC
Q 012836 198 QVVELLLSHGA 208 (455)
Q Consensus 198 ~iv~~Ll~~ga 208 (455)
+++++|++++.
T Consensus 176 ei~~~Lish~v 186 (300)
T PHA02884 176 DILKILVSHFI 186 (300)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=5.3e-20 Score=151.05 Aligned_cols=140 Identities=31% Similarity=0.355 Sum_probs=125.8
Q ss_pred HHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHH
Q 012836 80 PMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFE 159 (455)
Q Consensus 80 pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 159 (455)
-+-+|+..+...-|+.||+..++.++.+|.+|.||||.|+.+||.++++.|+.. +++.+.+...|+||||-||+..+.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc-cCCcccccccCccchhhhhcccchh
Confidence 367899999999999999999999999999999999999999999999999987 9999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCCh-HHHHHHHhcCCCCCCCccccccCCCCCCHHHHHh
Q 012836 160 VVRALVDWIRDVKKENILNMKDKQGNTALHLATWKREC-QVVELLLSHGANASGGLEVNATNHSGLTALDVLL 231 (455)
Q Consensus 160 ~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~-~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~ 231 (455)
++-+|+++|+|+ |...+...||||+|+..++. ..+++|+... .+.+..+++.+.||+++|.
T Consensus 145 va~~LLqhgaDV------nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dr-----yi~pg~~nn~eeta~~iAR 206 (228)
T KOG0512|consen 145 VAGRLLQHGADV------NAQTKGLLTPLHLAAGNRNSRDTLELLLHDR-----YIHPGLKNNLEETAFDIAR 206 (228)
T ss_pred HHHHHHhccCcc------cccccccchhhHHhhcccchHHHHHHHhhcc-----ccChhhhcCccchHHHHHH
Confidence 999999999998 88888899999999988776 4566666543 3478889999999999994
No 60
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1.5e-19 Score=169.22 Aligned_cols=156 Identities=14% Similarity=0.129 Sum_probs=133.4
Q ss_pred hhhcCCCCc-HHHHHHHcCCHHHHHHHHhcCccccccC----CCCCCCHHHHHHHhCCHHHHHHHHHhcCcccccc-ccC
Q 012836 71 KEVNQDGFS-PMHMASANGQIDVVRGLMKFDQKLCHLQ----GPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDV-SVQ 144 (455)
Q Consensus 71 ~~~~~~g~t-pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~----d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~ 144 (455)
..+|..|+| +||.|+..|+.+++++|+++|+++ +.+ +..|.||||+|+..|+.+++++|+++ |++++.. +..
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~-GADVN~~~~~~ 103 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY-GADVNRYAEEA 103 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcCcccCCC
Confidence 455777766 566677789999999999999998 555 46899999999999999999999987 9999986 467
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCC
Q 012836 145 RETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGL 224 (455)
Q Consensus 145 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~ 224 (455)
|.||||+|+..++.+++++|++.|+++ +.+|..|.||||+|+..++.+++.++. |. ..+..+.
T Consensus 104 g~TpLh~Aa~~~~~eivklLL~~GAdi------n~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---------~~~~~~~ 166 (300)
T PHA02884 104 KITPLYISVLHGCLKCLEILLSYGADI------NIQTNDMVTPIELALMICNNFLAFMIC--DN---------EISNFYK 166 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHhCChhHHHHhc--CC---------ccccccc
Confidence 999999999999999999999999988 899999999999999999988876664 32 2466778
Q ss_pred CHHHHHhhCCCCcCchhHHHHHHHhccc
Q 012836 225 TALDVLLSFPSEAGDREIEEIFWSAGAM 252 (455)
Q Consensus 225 t~l~~a~~~~~~~~~~~i~~~L~~~ga~ 252 (455)
+|++++ ...+++++|..+++.
T Consensus 167 ~~~~~~-------~n~ei~~~Lish~vl 187 (300)
T PHA02884 167 HPKKIL-------INFDILKILVSHFIL 187 (300)
T ss_pred Chhhhh-------ccHHHHHHHHHHHHH
Confidence 888875 357899999999984
No 61
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.83 E-value=3.9e-20 Score=177.17 Aligned_cols=212 Identities=24% Similarity=0.313 Sum_probs=167.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCH
Q 012836 45 NPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRV 124 (455)
Q Consensus 45 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 124 (455)
-.+.-|+..|..+-|+.|+..+.+. +..|.+|.|+||.+|...+.+||++|++.++++ +..|..|+||||.|+..||.
T Consensus 42 a~~l~A~~~~d~~ev~~ll~~ga~~-~~~n~DglTalhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLNRGASP-NLCNVDGLTALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHHhccccccHHHHHHHhccCCCc-cccCCccchhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhcccccH
Confidence 3567889999999999999999774 778999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHH-------------------H-HHhhhhcccccccccCCCC
Q 012836 125 DVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRAL-------------------V-DWIRDVKKENILNMKDKQG 184 (455)
Q Consensus 125 ~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L-------------------l-~~g~~~~~~~~~~~~d~~G 184 (455)
+++++|++. |++...++..|..|+..+...-..++...- + +...........+..+..|
T Consensus 120 ~i~~~li~~-gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG 198 (527)
T KOG0505|consen 120 NIVEYLIQH-GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARG 198 (527)
T ss_pred HHHHHHHHh-hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccccc
Confidence 999999998 888877777777666554322211111110 0 0000011223347777779
Q ss_pred CcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhcccccccCCCCCCCC
Q 012836 185 NTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRMRDLTLSPIRS 264 (455)
Q Consensus 185 ~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~ 264 (455)
.|.||.|+.+|..++.++|++.|. +++++|.+|+||||.|... +..+..++|.++|+.-. .
T Consensus 199 ~T~lHvAaa~Gy~e~~~lLl~ag~------~~~~~D~dgWtPlHAAA~W----g~~~~~elL~~~ga~~d---------~ 259 (527)
T KOG0505|consen 199 ATALHVAAANGYTEVAALLLQAGY------SVNIKDYDGWTPLHAAAHW----GQEDACELLVEHGADMD---------A 259 (527)
T ss_pred chHHHHHHhhhHHHHHHHHHHhcc------CcccccccCCCcccHHHHh----hhHhHHHHHHHhhcccc---------h
Confidence 999999999999999999999998 8999999999999999654 78889999999999543 3
Q ss_pred CCCCCCCccccccc
Q 012836 265 PEPHGQTSVDNCIS 278 (455)
Q Consensus 265 ~~~~~~~~~~~~~~ 278 (455)
....|++|.+.+.+
T Consensus 260 ~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 260 KTKMGETPLDVADE 273 (527)
T ss_pred hhhcCCCCccchhh
Confidence 33445555554443
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82 E-value=3.6e-20 Score=159.22 Aligned_cols=130 Identities=19% Similarity=0.221 Sum_probs=88.5
Q ss_pred hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcC------ccccccCCCCCCCHHHHHHHhCCHH---HHHHHHHhcCccccc
Q 012836 70 AKEVNQDGFSPMHMASANGQIDVVRGLMKFD------QKLCHLQGPERKTPLHFAAIKGRVD---VVSEMLSAYGECAED 140 (455)
Q Consensus 70 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~------~~~~~~~d~~g~tpLh~A~~~g~~~---~v~~Ll~~~~~~~~~ 140 (455)
.+..|..|.||||+|+..|+. ++++...+ ......+|.+|.||||+|+..|+.+ +++.|++. +.+++.
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~ 86 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADING 86 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccc
Confidence 445566777777777777763 22222111 1112345677778888887777764 46666665 677777
Q ss_pred cc-cCCCcHHHHHHHcCCHHHHHHHHHH-hhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCC
Q 012836 141 VS-VQRETVLHLAVKNNQFEVVRALVDW-IRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGA 208 (455)
Q Consensus 141 ~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga 208 (455)
.+ ..|+||||+|+..++.+++++|++. |.++ +.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~------n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 87 KERVFGNTPLHIAVYTQNYELATWLCNQPGVNM------EILNYAFKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC------ccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 76 3778888888888888888887763 5555 7777888888888888888888888887776
No 63
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.82 E-value=5.3e-20 Score=167.76 Aligned_cols=161 Identities=23% Similarity=0.290 Sum_probs=140.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHc-----CCHHHHHHHHhcCccccccCCCCCCCH
Q 012836 40 FASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASAN-----GQIDVVRGLMKFDQKLCHLQGPERKTP 114 (455)
Q Consensus 40 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~-----g~~~iv~~Ll~~~~~~~~~~d~~g~tp 114 (455)
+.+|+|+||||+.+++.++|+.||+.+-..+++.|..|+||+++|+.. .+.++|..|.+.|.-. -.....|+|+
T Consensus 265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVN-aKAsQ~gQTA 343 (452)
T KOG0514|consen 265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVN-AKASQHGQTA 343 (452)
T ss_pred cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcc-hhhhhhcchh
Confidence 346999999999999999999999999777889999999999999853 4678899998876543 3345679999
Q ss_pred HHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhc
Q 012836 115 LHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWK 194 (455)
Q Consensus 115 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~ 194 (455)
|++|+.+|+.++++.||. |++++|..|.+|-|+|++|+++|+.|++++|+.. ..-.+...|.+|.|+|.+|-..
T Consensus 344 LMLAVSHGr~d~vk~LLa-cgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~-----p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 344 LMLAVSHGRVDMVKALLA-CGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV-----PSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hhhhhhcCcHHHHHHHHH-ccCCCccccCCccHHHhhhhhhChHHHHHHHhcc-----CcccceeecCCCchhhhhHHhc
Confidence 999999999999999997 6999999999999999999999999999999963 2333488999999999999999
Q ss_pred CChHHHHHHHhcC
Q 012836 195 RECQVVELLLSHG 207 (455)
Q Consensus 195 ~~~~iv~~Ll~~g 207 (455)
|+.+|.-+|..+-
T Consensus 418 gh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 418 GHREIAVMLYAHM 430 (452)
T ss_pred CchHHHHHHHHHH
Confidence 9999999887664
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=1.3e-19 Score=155.68 Aligned_cols=128 Identities=17% Similarity=0.161 Sum_probs=107.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcC------CcchhhhcCCCCcHHHHHHHcCCH---HHHHHHHhcCccccccCC-CC
Q 012836 41 ASAGNPLHVASAYGHVDFVKEIIRLK------PDFAKEVNQDGFSPMHMASANGQI---DVVRGLMKFDQKLCHLQG-PE 110 (455)
Q Consensus 41 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~------~~~~~~~~~~g~tpLh~Aa~~g~~---~iv~~Ll~~~~~~~~~~d-~~ 110 (455)
..|.||||+|+..|+. ++.+...+ +......|.+|.||||+|+..|+. +++++|++.++++ +.++ .+
T Consensus 15 ~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~~~~ 91 (154)
T PHA02736 15 IEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKERVF 91 (154)
T ss_pred CCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-cccCCCC
Confidence 3599999999999984 23322211 223456788999999999999987 4688999999988 6777 58
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhh
Q 012836 111 RKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDV 171 (455)
Q Consensus 111 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 171 (455)
|.||||+|+..|+.+++++|+...+.+++..|..|+||||+|+..|+.+++++|+++|++.
T Consensus 92 g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 92 GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999998668899999999999999999999999999999988764
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.80 E-value=7.4e-19 Score=144.36 Aligned_cols=142 Identities=23% Similarity=0.304 Sum_probs=125.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHH
Q 012836 46 PLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVD 125 (455)
Q Consensus 46 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 125 (455)
-+..|+..+....|+.||+..++.++.+|.+|.||||.|+.+|+.+||+.|+..+++. ..+...|+||||.||+..+.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccchh
Confidence 4668999999999999999999999999999999999999999999999999999998 889999999999999999999
Q ss_pred HHHHHHHhcCccccccccCCCcHHHHHHHcCC-HHHHHHHHH-HhhhhcccccccccCCCCCcHHHHHHhcC
Q 012836 126 VVSEMLSAYGECAEDVSVQRETVLHLAVKNNQ-FEVVRALVD-WIRDVKKENILNMKDKQGNTALHLATWKR 195 (455)
Q Consensus 126 ~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~v~~Ll~-~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 195 (455)
++-.||++ |++++.......||||+|+..++ ...+++|+. .+.++ ..+++.+.||+.+|-+.+
T Consensus 145 va~~LLqh-gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~p------g~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 145 VAGRLLQH-GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHP------GLKNNLEETAFDIARRTS 209 (228)
T ss_pred HHHHHHhc-cCcccccccccchhhHHhhcccchHHHHHHHhhccccCh------hhhcCccchHHHHHHHhh
Confidence 99999998 99999999999999999998877 455666664 22222 567889999999997664
No 66
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2e-19 Score=159.06 Aligned_cols=152 Identities=30% Similarity=0.365 Sum_probs=125.3
Q ss_pred HHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHH
Q 012836 85 SANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRAL 164 (455)
Q Consensus 85 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L 164 (455)
|+.|+.--|+.-++......+..|..|.+|||+||+.||..+++.|+++ |+-+|..+....||||+|+.+|+.++++.|
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~r-garvn~tnmgddtplhlaaahghrdivqkl 86 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNSTNMGDDTPLHLAAAHGHRDIVQKL 86 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhc-ccccccccCCCCcchhhhhhcccHHHHHHH
Confidence 4445544445445544444588899999999999999999999999998 899999988889999999999999999999
Q ss_pred HHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHH
Q 012836 165 VDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEE 244 (455)
Q Consensus 165 l~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~ 244 (455)
++..+|+ |..++.|+|||||||.-|+-.+.+-|+..|+ .+++.|++|.|||+.|. ..-...+.+
T Consensus 87 l~~kadv------navnehgntplhyacfwgydqiaedli~~ga------~v~icnk~g~tpldkak----p~l~~~l~e 150 (448)
T KOG0195|consen 87 LSRKADV------NAVNEHGNTPLHYACFWGYDQIAEDLISCGA------AVNICNKKGMTPLDKAK----PMLKNTLLE 150 (448)
T ss_pred HHHhccc------chhhccCCCchhhhhhhcHHHHHHHHHhccc------eeeecccCCCCchhhhc----hHHHHHHHH
Confidence 9988877 9999999999999999999999999999999 89999999999999882 112233445
Q ss_pred HHHHhcccc
Q 012836 245 IFWSAGAMR 253 (455)
Q Consensus 245 ~L~~~ga~~ 253 (455)
+-.++|-.+
T Consensus 151 ~aek~gq~~ 159 (448)
T KOG0195|consen 151 IAEKHGQSP 159 (448)
T ss_pred HHHHhCCCC
Confidence 555555543
No 67
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-17 Score=167.51 Aligned_cols=191 Identities=22% Similarity=0.275 Sum_probs=159.7
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCc--------ccCCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCcchhhh----c
Q 012836 10 RRLIAAALTGDVQTLQQLFVENPL--------ILHTPAFASAGNPLHVASAY---GHVDFVKEIIRLKPDFAKEV----N 74 (455)
Q Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~--------~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~----~ 74 (455)
.++..|...|+.+.+..++..... ..... ...|+|.||.|..+ ++.++++.|++..|.+++.. .
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee 181 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER-GATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE 181 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence 668888889999888888775521 11111 22499999999884 45699999999887655433 4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCccccc--------cCC--------------CCCCCHHHHHHHhCCHHHHHHHHH
Q 012836 75 QDGFSPMHMASANGQIDVVRGLMKFDQKLCH--------LQG--------------PERKTPLHFAAIKGRVDVVSEMLS 132 (455)
Q Consensus 75 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~--------~~d--------------~~g~tpLh~A~~~g~~~~v~~Ll~ 132 (455)
..|.||||+|+.+.+.++|++|++.|+|+.. ..| ..|+.||-+||-.++.|+++.|++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 5799999999999999999999999988721 111 137799999999999999999999
Q ss_pred hcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhc
Q 012836 133 AYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 133 ~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
+ +++++..|.+|+|.||..+.+-..++..+++++|++ .+...+|++|-|||.+|++.|..++++.+++.
T Consensus 262 ~-gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~----~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 262 H-GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN----ALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred c-CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC----ccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 6 999999999999999999999999999999999987 33478899999999999999999999999998
No 68
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.77 E-value=4.3e-19 Score=180.67 Aligned_cols=231 Identities=23% Similarity=0.305 Sum_probs=206.0
Q ss_pred cccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHH
Q 012836 6 TRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMAS 85 (455)
Q Consensus 6 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa 85 (455)
...+|+|-.||..|+.|.++.|+.++..+.... ..|.+||.+|+-.||..+|+.|+.+..++-.+.|..+.|+|.+||
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rganiehrd--kkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRD--KKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhcccccccc--cccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 456899999999999999999999988765543 469999999999999999999999999988888999999999999
Q ss_pred HcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccc--cCCCcHHHHHHHcCCHHHHHH
Q 012836 86 ANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVS--VQRETVLHLAVKNNQFEVVRA 163 (455)
Q Consensus 86 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~g~t~Lh~A~~~~~~~~v~~ 163 (455)
..|..++|++||..+++. ..++-...|||.+|...|..+++..|+.. |..++.+. +.|-.||.+|..+|+.+..+.
T Consensus 833 sggr~~vvelLl~~gank-ehrnvsDytPlsla~Sggy~~iI~~llS~-GseInSrtgSklgisPLmlatmngh~~at~~ 910 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANK-EHRNVSDYTPLSLARSGGYTKIIHALLSS-GSEINSRTGSKLGISPLMLATMNGHQAATLS 910 (2131)
T ss_pred CCCcchHHHHHHHhhccc-cccchhhcCchhhhcCcchHHHHHHHhhc-ccccccccccccCcchhhhhhhccccHHHHH
Confidence 999999999999999887 77888889999999999999999999998 87777654 468899999999999999999
Q ss_pred HHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHH
Q 012836 164 LVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIE 243 (455)
Q Consensus 164 Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~ 243 (455)
|++.|.|++. ...-+.||+|-+|+..|+.+++.+||...+ ++..+-+.|.|||.-+. ..+..++-
T Consensus 911 ll~~gsdiNa-----qIeTNrnTaltla~fqgr~evv~lLLa~~a------nvehRaktgltplme~A----sgGyvdvg 975 (2131)
T KOG4369|consen 911 LLQPGSDINA-----QIETNRNTALTLALFQGRPEVVFLLLAAQA------NVEHRAKTGLTPLMEMA----SGGYVDVG 975 (2131)
T ss_pred Hhcccchhcc-----ccccccccceeeccccCcchHHHHHHHHhh------hhhhhcccCCcccchhh----cCCccccc
Confidence 9999888732 235677899999999999999999999988 78889999999998774 45888999
Q ss_pred HHHHHhcccccc
Q 012836 244 EIFWSAGAMRMR 255 (455)
Q Consensus 244 ~~L~~~ga~~~~ 255 (455)
++|+..||+...
T Consensus 976 ~~li~~gad~na 987 (2131)
T KOG4369|consen 976 NLLIAAGADTNA 987 (2131)
T ss_pred hhhhhccccccc
Confidence 999999997653
No 69
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.72 E-value=3.4e-18 Score=174.25 Aligned_cols=239 Identities=21% Similarity=0.241 Sum_probs=179.4
Q ss_pred ccCcccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHH
Q 012836 3 SYSTRMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMH 82 (455)
Q Consensus 3 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 82 (455)
-.+.+|-++|..|+-.|+..+|+.|+..+.++.... +..++|+|.+||..|..++|+.||..+.+. ..++-...|||.
T Consensus 785 hrdkkgf~plImaatagh~tvV~~llk~ha~veaQs-drtkdt~lSlacsggr~~vvelLl~~gank-ehrnvsDytPls 862 (2131)
T KOG4369|consen 785 HRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS-DRTKDTMLSLACSGGRTRVVELLLNAGANK-EHRNVSDYTPLS 862 (2131)
T ss_pred ccccccchhhhhhcccCchHHHHHHHhhhhhhhhhc-ccccCceEEEecCCCcchHHHHHHHhhccc-cccchhhcCchh
Confidence 357788899999999999999999998887665443 455889999999999999999999988773 445777888888
Q ss_pred HHHHcCCHHHHHHHHhcCcccccc-CCCCCCCHHHHHHHhCCHHHHHHHHHhcCcccccc-ccCCCcHHHHHHHcCCHHH
Q 012836 83 MASANGQIDVVRGLMKFDQKLCHL-QGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDV-SVQRETVLHLAVKNNQFEV 160 (455)
Q Consensus 83 ~Aa~~g~~~iv~~Ll~~~~~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~ 160 (455)
+|...|..+++..|+..|.++... -...|-+||..|.++||.+.++.|++. +.++|.. .-+.+|+|-+|+-.|+.++
T Consensus 863 la~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTNrnTaltla~fqgr~ev 941 (2131)
T KOG4369|consen 863 LARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETNRNTALTLALFQGRPEV 941 (2131)
T ss_pred hhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccccccceeeccccCcchH
Confidence 888888888888888888776322 234577888888888888888888876 6666543 2355677777777777777
Q ss_pred HHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCC-----------------------------
Q 012836 161 VRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANAS----------------------------- 211 (455)
Q Consensus 161 v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~----------------------------- 211 (455)
+.+||...++. ..+-+.|-|||.-++..|.+++-++|+..|++.+
T Consensus 942 v~lLLa~~anv------ehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln 1015 (2131)
T KOG4369|consen 942 VFLLLAAQANV------EHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLN 1015 (2131)
T ss_pred HHHHHHHhhhh------hhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhC
Confidence 77777766555 5566677777777777777777777777776521
Q ss_pred CCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccccc
Q 012836 212 GGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRM 254 (455)
Q Consensus 212 ~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~ 254 (455)
....+..+|++|+|+|.+|+ ..+....+++|.+++++..
T Consensus 1016 ~~atv~v~NkkG~T~Lwla~----~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen 1016 GDATVRVPNKKGCTVLWLAS----AGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred CccceecccCCCCcccchhc----cCCccccchHHhhcccChh
Confidence 12246678899999999884 4567777888888888644
No 70
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=6.9e-18 Score=149.47 Aligned_cols=133 Identities=23% Similarity=0.335 Sum_probs=83.5
Q ss_pred HHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHH
Q 012836 16 ALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRG 95 (455)
Q Consensus 16 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~ 95 (455)
|+.|+.-.|+..|++....++ ..++.|.+|||+||+.|+..+|+.|+.+++. ++..|....||||+|+..||-++|+.
T Consensus 8 cregna~qvrlwld~tehdln-~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqk 85 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLN-VGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQK 85 (448)
T ss_pred hhcCCeEEEEEEecCcccccc-cccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHH
Confidence 344444444444443322222 2233466777777777777777777777665 45556666677777777777777777
Q ss_pred HHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHH
Q 012836 96 LMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLA 152 (455)
Q Consensus 96 Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 152 (455)
|++..+++ +..++.|.||||+||..|.-.+++-|+.. |+.++..+++|.|||..|
T Consensus 86 ll~~kadv-navnehgntplhyacfwgydqiaedli~~-ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 86 LLSRKADV-NAVNEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHHHhccc-chhhccCCCchhhhhhhcHHHHHHHHHhc-cceeeecccCCCCchhhh
Confidence 77766666 66667777777777777776666666664 666677777777776655
No 71
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=2.1e-16 Score=158.89 Aligned_cols=163 Identities=20% Similarity=0.206 Sum_probs=141.0
Q ss_pred cccCcccCHHHHHHHHc---CCHHHHHHHHhcCCcccCCCCCC---CCChHHHHHHHcCCHHHHHHHHHcCCcchhhh--
Q 012836 2 TSYSTRMDRRLIAAALT---GDVQTLQQLFVENPLILHTPAFA---SAGNPLHVASAYGHVDFVKEIIRLKPDFAKEV-- 73 (455)
Q Consensus 2 t~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~---~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-- 73 (455)
..+...|+|.||.|..+ +.-+.++.|++--|...+..... .|+||||+|+.+.+.++|+.|++.++++ +.+
T Consensus 137 ~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV-~aRa~ 215 (782)
T KOG3676|consen 137 NERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADV-HARAC 215 (782)
T ss_pred ccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCch-hhHhh
Confidence 34577899999999983 45589999999887765544332 3999999999999999999999999874 211
Q ss_pred -------c--------------CCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHH
Q 012836 74 -------N--------------QDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLS 132 (455)
Q Consensus 74 -------~--------------~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 132 (455)
| ..|..||.+||..++.+++++|+++++|+ +.+|..|+|.||..+..-..++...+++
T Consensus 216 G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~-~aqDS~GNTVLH~lVi~~~~~My~~~L~ 294 (782)
T KOG3676|consen 216 GAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP-NAQDSNGNTVLHMLVIHFVTEMYDLALE 294 (782)
T ss_pred ccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC-CccccCCChHHHHHHHHHHHHHHHHHHh
Confidence 1 24779999999999999999999999999 9999999999999999999999999998
Q ss_pred hcCcc--ccccccCCCcHHHHHHHcCCHHHHHHHHHH
Q 012836 133 AYGEC--AEDVSVQRETVLHLAVKNNQFEVVRALVDW 167 (455)
Q Consensus 133 ~~~~~--~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 167 (455)
. ++. ...+|..|-|||.+|++.|+.++++.+++.
T Consensus 295 ~-ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 295 L-GANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred c-CCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 7 666 677889999999999999999999999996
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69 E-value=4.3e-16 Score=128.14 Aligned_cols=122 Identities=36% Similarity=0.606 Sum_probs=68.2
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHH
Q 012836 74 NQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAV 153 (455)
Q Consensus 74 ~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 153 (455)
|.+|.||||+|+..|+.+++++|++.+.+. ..++..|.+|+|.|+..++.++++.|+.. +..++..+..|.||+|+|+
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEK-GADVNARDKDGNTPLHLAA 81 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHH
Confidence 344555555555555555555555555544 44455555555555555555555555554 3344444555556666666
Q ss_pred HcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHH
Q 012836 154 KNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELL 203 (455)
Q Consensus 154 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~L 203 (455)
..++.+++++|++.+.+. +..|..|.||+|+|...++.+++++|
T Consensus 82 ~~~~~~~~~~L~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 82 RNGNLDVVKLLLKHGADV------NARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HcCcHHHHHHHHHcCCCC------cccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 666666666665544333 45555666666666666666666555
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.69 E-value=1.8e-16 Score=122.72 Aligned_cols=83 Identities=40% Similarity=0.595 Sum_probs=62.2
Q ss_pred HHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhc
Q 012836 115 LHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWK 194 (455)
Q Consensus 115 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~ 194 (455)
||+|+..|+.+++++|++. +.+++. |+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+..
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~------~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL----GNTALHYAAENGNLEIVKLLLENGADI------NSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCT------T-BSTTSSBHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccc------cccCCCCCCHHHHHHHc
Confidence 6777777777777777775 444443 677888888888888888888777776 77777888888888888
Q ss_pred CChHHHHHHHhcCC
Q 012836 195 RECQVVELLLSHGA 208 (455)
Q Consensus 195 ~~~~iv~~Ll~~ga 208 (455)
|+.+++++|+++|+
T Consensus 70 ~~~~~~~~Ll~~g~ 83 (89)
T PF12796_consen 70 GNLEIVKLLLEHGA 83 (89)
T ss_dssp THHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHcCC
Confidence 88888888888777
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66 E-value=7.5e-16 Score=119.23 Aligned_cols=85 Identities=25% Similarity=0.435 Sum_probs=41.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHH
Q 012836 12 LIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQID 91 (455)
Q Consensus 12 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~ 91 (455)
||.||+.|+.++++.|++.+.+... |+||||+|+..|+.+++++|++.+++ .+..|..|+||||+|+.+|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHHHHcCCHH
Confidence 4555555555555555554432211 44555555555555555555555544 2444455555555555555555
Q ss_pred HHHHHHhcCccc
Q 012836 92 VVRGLMKFDQKL 103 (455)
Q Consensus 92 iv~~Ll~~~~~~ 103 (455)
++++|++++.++
T Consensus 74 ~~~~Ll~~g~~~ 85 (89)
T PF12796_consen 74 IVKLLLEHGADV 85 (89)
T ss_dssp HHHHHHHTTT-T
T ss_pred HHHHHHHcCCCC
Confidence 555555554443
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.66 E-value=2.4e-15 Score=123.66 Aligned_cols=121 Identities=34% Similarity=0.587 Sum_probs=99.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHh
Q 012836 42 SAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK 121 (455)
Q Consensus 42 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 121 (455)
.|.||||.|+..|+.+++++|++.+... ...+..|.||||.|+..++.+++++|++.+... +..+..|.||+|.|+..
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHLAARN 83 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHc
Confidence 4888888888888888888888888763 566778888888888888888888888888765 66677888888888888
Q ss_pred CCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHH
Q 012836 122 GRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALV 165 (455)
Q Consensus 122 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll 165 (455)
++.+++++|+++ +...+..+..|.||+++|...++.+++++|+
T Consensus 84 ~~~~~~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 84 GNLDVVKLLLKH-GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 888888888886 5667777788888888888888888888763
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.55 E-value=1.7e-13 Score=124.94 Aligned_cols=131 Identities=28% Similarity=0.400 Sum_probs=119.7
Q ss_pred hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCC-----HHHHHHHHHhcC--ccccccc
Q 012836 70 AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGR-----VDVVSEMLSAYG--ECAEDVS 142 (455)
Q Consensus 70 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~-----~~~v~~Ll~~~~--~~~~~~~ 142 (455)
....+..+.+++|.++..+..+++++++..+.+. +.+|.+|.||||+|+..|+ .++++.|+.... ...+..|
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~ 144 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD 144 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence 3455677899999999999999999999999999 9999999999999999999 999999999844 3777779
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcC
Q 012836 143 VQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHG 207 (455)
Q Consensus 143 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 207 (455)
..|+||||+|+..|+.++++++++.|+++ +.++..|.|+++.|+..++.++++.+++.+
T Consensus 145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 145 EDGNTPLHWAALNGDADIVELLLEAGADP------NSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCchhHHHHHcCchHHHHHHHhcCCCC------cccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999998887 778999999999999999999999999875
No 77
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.54 E-value=4e-14 Score=104.22 Aligned_cols=103 Identities=24% Similarity=0.388 Sum_probs=88.9
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHh
Q 012836 114 PLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATW 193 (455)
Q Consensus 114 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~ 193 (455)
-+.++.++|..+-|+..+.. +.+++..- .|++|||+|+-.|+.+++++|+..|+++ +.+|+.|-|||-.|+.
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~-g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i------~~kDKygITPLLsAvw 76 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNE-GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANI------QDKDKYGITPLLSAVW 76 (117)
T ss_pred hHhhhhccCcHHHHHHHHHc-cccHHHHh-CCcccchHhhhcchHHHHHHHHHhcccc------CCccccCCcHHHHHHH
Confidence 45678889999999888877 56666543 7899999999999999999999999987 8999999999999999
Q ss_pred cCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHH
Q 012836 194 KRECQVVELLLSHGANASGGLEVNATNHSGLTALDVL 230 (455)
Q Consensus 194 ~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a 230 (455)
.|+.++|++|+++|+ +-..+--+|.+.++.+
T Consensus 77 EGH~~cVklLL~~GA------drt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGA------DRTIHAPDGTALIEAT 107 (117)
T ss_pred HhhHHHHHHHHHcCc------ccceeCCCchhHHhhc
Confidence 999999999999999 6667777888887765
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.51 E-value=8.9e-14 Score=102.39 Aligned_cols=103 Identities=18% Similarity=0.343 Sum_probs=76.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcC
Q 012836 9 DRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANG 88 (455)
Q Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g 88 (455)
+-.+..++.+|+++.|+..+.++-+++... .|++|||+|+-+|+.+++++|+..+++ .+.+|+.|.|||--|+-.|
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~~---ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEG 78 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEIY---GGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEG 78 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHccccHHHHh---CCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHh
Confidence 445667788888888888887774443332 478888888888888888888888877 4666888888888888888
Q ss_pred CHHHHHHHHhcCccccccCCCCCCCHHH
Q 012836 89 QIDVVRGLMKFDQKLCHLQGPERKTPLH 116 (455)
Q Consensus 89 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 116 (455)
|.++|++|++.|++. ..+..+|.+.+.
T Consensus 79 H~~cVklLL~~GAdr-t~~~PdG~~~~e 105 (117)
T KOG4214|consen 79 HRDCVKLLLQNGADR-TIHAPDGTALIE 105 (117)
T ss_pred hHHHHHHHHHcCccc-ceeCCCchhHHh
Confidence 888888888888776 556666665543
No 79
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.50 E-value=9.1e-13 Score=120.16 Aligned_cols=132 Identities=34% Similarity=0.503 Sum_probs=117.4
Q ss_pred ccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCC-----HHHHHHHHHHhhhhcccccccc
Q 012836 105 HLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQ-----FEVVRALVDWIRDVKKENILNM 179 (455)
Q Consensus 105 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-----~~~v~~Ll~~g~~~~~~~~~~~ 179 (455)
...+..+.+++|.++..+..+++++++.. +.+++..+..|.||||+|+..++ .+++++|++.|++ ....+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~---~~~~~~ 142 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLAS-GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD---LDVNNL 142 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHc-CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC---CCCccc
Confidence 45667789999999999999999898887 77889999999999999999999 9999999999882 012377
Q ss_pred cCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHhc
Q 012836 180 KDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSAG 250 (455)
Q Consensus 180 ~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~g 250 (455)
+|..|+||||+|+..|+.+++++|++.|+ +++..|..|.|+++.|. ..+..++...+.+.+
T Consensus 143 ~~~~g~tpl~~A~~~~~~~~~~~ll~~~~------~~~~~~~~g~t~l~~a~----~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 RDEDGNTPLHWAALNGDADIVELLLEAGA------DPNSRNSYGVTALDPAA----KNGRIELVKLLLDKG 203 (235)
T ss_pred cCCCCCchhHHHHHcCchHHHHHHHhcCC------CCcccccCCCcchhhhc----ccchHHHHHHHHhcC
Confidence 89999999999999999999999999999 78888999999999995 457888888888876
No 80
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.41 E-value=1.6e-12 Score=115.64 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=108.8
Q ss_pred ccCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHH
Q 012836 7 RMDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASA 86 (455)
Q Consensus 7 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~ 86 (455)
.-..+|.+++-.||.+.+..||..-..++. .+.+|.|+|..|+..|+.++|+.|++.++++....+..+.||||+|+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~--~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQ--RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhc--cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 446789999999999999999987443332 234699999999999999999999999999888888899999999999
Q ss_pred cCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHh
Q 012836 87 NGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSA 133 (455)
Q Consensus 87 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 133 (455)
+|+.++.+.|++.|+.. ...+.-|+|+-.+|+.-|+.++|..+-..
T Consensus 89 SGn~dvcrllldaGa~~-~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARM-YLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred cCCchHHHHHHhccCcc-ccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999999999988 77888999999999999999999765543
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=1.3e-12 Score=124.86 Aligned_cols=117 Identities=23% Similarity=0.340 Sum_probs=91.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHH
Q 012836 47 LHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDV 126 (455)
Q Consensus 47 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~ 126 (455)
|.-|+..|.+|+|+.++..-.+ ..+.|++|.|+||-|+..||.+||++|++.|+++ +..|.+|+||||.|+..+++.+
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHH
Confidence 4457888888888888877655 5677888889999988888999999998888887 8888889999999888888888
Q ss_pred HHHHHHhcCccccccc-cCCCcHHHHH--HHcCCHHHHHHHHH
Q 012836 127 VSEMLSAYGECAEDVS-VQRETVLHLA--VKNNQFEVVRALVD 166 (455)
Q Consensus 127 v~~Ll~~~~~~~~~~~-~~g~t~Lh~A--~~~~~~~~v~~Ll~ 166 (455)
++.|++. |+.+...+ .++.|+..-+ .+.|...+.+||..
T Consensus 632 ckqLVe~-GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 632 CKQLVES-GAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHhc-cceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 8888887 55554433 4667776543 34567778888864
No 82
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=1.4e-12 Score=124.72 Aligned_cols=119 Identities=24% Similarity=0.292 Sum_probs=103.2
Q ss_pred HHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcC
Q 012836 116 HFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKR 195 (455)
Q Consensus 116 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 195 (455)
.-|+..|.+|+|+.++.. -.++...+..|.|+||-|++.|+.+||++|++.|+++ |..|.+|+||||+|+..+
T Consensus 555 LDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV------Na~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 555 LDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANV------NAADSDGWTPLHCAASCN 627 (752)
T ss_pred HhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc------cCccCCCCchhhhhhhcC
Confidence 448899999999999988 6778888899999999999999999999999999998 999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHH
Q 012836 196 ECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWS 248 (455)
Q Consensus 196 ~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~ 248 (455)
+..+++.|++.|+. -+-..-.++.||.+-.... +.+...+.++|..
T Consensus 628 nv~~ckqLVe~Gaa-----vfAsTlSDmeTa~eKCee~--eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 628 NVPMCKQLVESGAA-----VFASTLSDMETAAEKCEEM--EEGYDQCSQYLYG 673 (752)
T ss_pred chHHHHHHHhccce-----EEeeecccccchhhhcchh--hhhHHHHHHHHHH
Confidence 99999999999983 2334556788998877543 5677788888764
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.37 E-value=2.3e-12 Score=135.49 Aligned_cols=86 Identities=31% Similarity=0.357 Sum_probs=56.4
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHh
Q 012836 114 PLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATW 193 (455)
Q Consensus 114 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~ 193 (455)
.|+.|+..|+.+.++.|++. +.+++..|.+|+||||+|+.+|+.+++++|+++|+++ +.+|.+|+||||+|+.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv------n~~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTG-GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP------TLLDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHH
Confidence 45666666666666666664 5666666666666666666666666666666666655 6666666666666666
Q ss_pred cCChHHHHHHHhc
Q 012836 194 KRECQVVELLLSH 206 (455)
Q Consensus 194 ~~~~~iv~~Ll~~ 206 (455)
.++.+++++|+++
T Consensus 158 ~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 158 NGFREVVQLLSRH 170 (664)
T ss_pred CCcHHHHHHHHhC
Confidence 6666666666666
No 84
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.35 E-value=1.9e-12 Score=89.70 Aligned_cols=54 Identities=33% Similarity=0.553 Sum_probs=35.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHH
Q 012836 145 RETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLL 204 (455)
Q Consensus 145 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll 204 (455)
|+||||+|++.|+.+++++|++.|.++ |.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di------n~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI------NAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT------T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567777777777777777777776665 667777777777777777777777764
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.35 E-value=2.2e-12 Score=89.34 Aligned_cols=52 Identities=37% Similarity=0.639 Sum_probs=19.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHH
Q 012836 44 GNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGL 96 (455)
Q Consensus 44 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~L 96 (455)
.||||.|+..|+.+++++|++.+.+ ++.+|.+|.||||+|+..|+.+++++|
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 3444444444444444444444433 233344444444444444444444444
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.35 E-value=8.2e-13 Score=92.03 Aligned_cols=48 Identities=44% Similarity=0.595 Sum_probs=27.7
Q ss_pred ccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHH
Q 012836 177 LNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVL 230 (455)
Q Consensus 177 ~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a 230 (455)
++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||+|+|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~------d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA------DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHHCT--------TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC------CCCCCcCCCCCHHHhC
Confidence 37788888888888888888888888887777 7888888888888876
No 87
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.33 E-value=6.8e-12 Score=131.95 Aligned_cols=86 Identities=28% Similarity=0.290 Sum_probs=55.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHH
Q 012836 80 PMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFE 159 (455)
Q Consensus 80 pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 159 (455)
.|+.|+..|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|++. |.+++..|.+|.||||+|+..|+.+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEF-GADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 355666666666666666666665 55566666666666666666666666665 5666666666666666666666666
Q ss_pred HHHHHHHH
Q 012836 160 VVRALVDW 167 (455)
Q Consensus 160 ~v~~Ll~~ 167 (455)
++++|+++
T Consensus 163 iv~~Ll~~ 170 (664)
T PTZ00322 163 VVQLLSRH 170 (664)
T ss_pred HHHHHHhC
Confidence 66666665
No 88
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.31 E-value=1.6e-11 Score=109.42 Aligned_cols=123 Identities=22% Similarity=0.259 Sum_probs=113.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC
Q 012836 43 AGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG 122 (455)
Q Consensus 43 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 122 (455)
-+.||..++..|+.+-...|++...+ ++.+|..|.|||..|+..|+.++|+.|++.++++...++..+.||||+|+..|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 56899999999999999999987655 68889999999999999999999999999999997788888999999999999
Q ss_pred CHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHH
Q 012836 123 RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDW 167 (455)
Q Consensus 123 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 167 (455)
+.++.+.|++. |+.....+.-|+|+-..|+--|+.++|..+-++
T Consensus 91 n~dvcrlllda-Ga~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 91 NQDVCRLLLDA-GARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred CchHHHHHHhc-cCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999998 888999999999999999999999999877544
No 89
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.29 E-value=2.6e-12 Score=89.50 Aligned_cols=55 Identities=36% Similarity=0.340 Sum_probs=22.2
Q ss_pred HHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHH
Q 012836 131 LSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLA 191 (455)
Q Consensus 131 l~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A 191 (455)
|++.+.+++..|..|+||||+|+..|+.+++++|++.|.++ +.+|.+|+||||+|
T Consensus 2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~------~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP------NAKDKDGQTPLHYA 56 (56)
T ss_dssp ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T------T---TTS--HHHH-
T ss_pred CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC------CCCcCCCCCHHHhC
Confidence 34333556666666666666666666666666666666555 66666666666665
No 90
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.92 E-value=5.2e-09 Score=101.30 Aligned_cols=122 Identities=22% Similarity=0.293 Sum_probs=105.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-cchhhhcCCCCcHHHHHHHc
Q 012836 9 DRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKP-DFAKEVNQDGFSPMHMASAN 87 (455)
Q Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~tpLh~Aa~~ 87 (455)
...+..|+..+|+-.++..-..+........ ...|.||+|+..|+-|+|++|++++| ++++..|..|.|+||-|+..
T Consensus 867 seeil~av~~~D~~klqE~h~~gg~ll~~~~--~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~ 944 (1004)
T KOG0782|consen 867 SEEILRAVLSSDLMKLQETHLNGGSLLIQGP--DHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ 944 (1004)
T ss_pred cHHHHHHHHhccHHHHHHHHhcCCceEeeCc--chhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh
Confidence 3448899999998888887777776665543 36899999999999999999999986 56677789999999999999
Q ss_pred CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHh
Q 012836 88 GQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSA 133 (455)
Q Consensus 88 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 133 (455)
++-.++++|++.|+++ ...|..|.||-.-|-..|+.++..+|-++
T Consensus 945 ~~r~vc~~lvdagasl-~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 945 RNRAVCQLLVDAGASL-RKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred cchHHHHHHHhcchhh-eecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 9999999999999998 77899999999999999999999887765
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.85 E-value=1.9e-09 Score=108.73 Aligned_cols=86 Identities=31% Similarity=0.398 Sum_probs=42.0
Q ss_pred hcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccC-CCCCcHHHHHHhcCChHHHHHHHhcCCCCC
Q 012836 133 AYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKD-KQGNTALHLATWKRECQVVELLLSHGANAS 211 (455)
Q Consensus 133 ~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 211 (455)
.|+...+.+|..|+|+||+|+..+..+++++|+++|.++ +.+| +.|.||||-|...|+++++-+||++|+
T Consensus 40 ~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv------~vqD~ESG~taLHRaiyyG~idca~lLL~~g~--- 110 (1267)
T KOG0783|consen 40 SCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV------FVQDEESGYTALHRAIYYGNIDCASLLLSKGR--- 110 (1267)
T ss_pred hhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee------eeccccccchHhhHhhhhchHHHHHHHHhcCC---
Confidence 333444444455555555555555555555555554444 3333 344555555555555555555555544
Q ss_pred CCccccccCCCCCCHHHHH
Q 012836 212 GGLEVNATNHSGLTALDVL 230 (455)
Q Consensus 212 ~~v~~~~~n~~g~t~l~~a 230 (455)
.+.++|++|..||+..
T Consensus 111 ---SL~i~Dkeglsplq~~ 126 (1267)
T KOG0783|consen 111 ---SLRIKDKEGLSPLQFL 126 (1267)
T ss_pred ---ceEEecccCCCHHHHH
Confidence 4445555555555544
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.80 E-value=5.6e-09 Score=99.23 Aligned_cols=92 Identities=26% Similarity=0.265 Sum_probs=72.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHH
Q 012836 75 QDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVK 154 (455)
Q Consensus 75 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 154 (455)
.++..++.+|+..|++..++.+.-.+.++ ..+|.+.+|+||.||..|+.+++++|++.+..+++.+|+.|+|||.-|..
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 34556778888888888888777777777 77788888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHH
Q 012836 155 NNQFEVVRALVDW 167 (455)
Q Consensus 155 ~~~~~~v~~Ll~~ 167 (455)
.++.+++++|-+.
T Consensus 583 F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 583 FKHKEVVKLLEEA 595 (622)
T ss_pred cCcHHHHHHHHHH
Confidence 8888888777653
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.70 E-value=1.2e-08 Score=103.07 Aligned_cols=102 Identities=19% Similarity=0.257 Sum_probs=84.4
Q ss_pred cCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHH
Q 012836 18 TGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLM 97 (455)
Q Consensus 18 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 97 (455)
.+..+.++-++.+.........+.-|+|+||+|+..|..+++++|+++|.++.-+....|+||||.|...|+++++..||
T Consensus 27 Ks~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL 106 (1267)
T KOG0783|consen 27 KSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL 106 (1267)
T ss_pred cCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHH
Confidence 34444566666654443344444459999999999999999999999998876666678999999999999999999999
Q ss_pred hcCccccccCCCCCCCHHHHHHH
Q 012836 98 KFDQKLCHLQGPERKTPLHFAAI 120 (455)
Q Consensus 98 ~~~~~~~~~~d~~g~tpLh~A~~ 120 (455)
.+|..+ .++|++|.+||..-++
T Consensus 107 ~~g~SL-~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 107 SKGRSL-RIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hcCCce-EEecccCCCHHHHHhh
Confidence 999998 9999999999998776
No 94
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.65 E-value=1e-07 Score=92.48 Aligned_cols=119 Identities=23% Similarity=0.213 Sum_probs=98.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCcc-ccccccCCCcHHHHHHHcCCHH
Q 012836 81 MHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGEC-AEDVSVQRETVLHLAVKNNQFE 159 (455)
Q Consensus 81 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~Lh~A~~~~~~~ 159 (455)
+-.|+..++.--++.....|.++ -.++.+..+.||+|++.|+-|+|+++|++.|.. .+..|..|+|+||.|+..++..
T Consensus 870 il~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 34556666655555666667777 678888999999999999999999999986643 4667889999999999999999
Q ss_pred HHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhc
Q 012836 160 VVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 160 ~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
++++|++.|+.. ...|..|.||-.-|-+.|+.+...+|-++
T Consensus 949 vc~~lvdagasl------~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 949 VCQLLVDAGASL------RKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHHHhcchhh------eecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 999999988876 67899999999999999999999888654
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.57 E-value=7.2e-08 Score=57.26 Aligned_cols=26 Identities=50% Similarity=0.767 Sum_probs=24.3
Q ss_pred CCCcHHHHHHhcCChHHHHHHHhcCC
Q 012836 183 QGNTALHLATWKRECQVVELLLSHGA 208 (455)
Q Consensus 183 ~G~T~Lh~A~~~~~~~iv~~Ll~~ga 208 (455)
+|+||||+|+..|+.+++++|+++|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~ga 26 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGA 26 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 58999999999999999999999998
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.56 E-value=8.8e-08 Score=58.56 Aligned_cols=33 Identities=45% Similarity=0.751 Sum_probs=29.7
Q ss_pred CCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCC
Q 012836 183 QGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNH 221 (455)
Q Consensus 183 ~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~ 221 (455)
+|+||||+|+..|+.+++++|+++|+ +++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga------~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGA------DINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTS------CTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcC------CCCCCCC
Confidence 58999999999999999999999999 7777764
No 97
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.56 E-value=1.2e-07 Score=91.88 Aligned_cols=90 Identities=23% Similarity=0.396 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCC
Q 012836 10 RRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQ 89 (455)
Q Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~ 89 (455)
.+||.++...+.+.+...+...........+..|+||||+|+..|+.+.++.|+..+++ ...+|.+||+|||.|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCC
Confidence 34778888777777776555443322233333478888888888888888888888776 46667888888888888888
Q ss_pred HHHHHHHHhcC
Q 012836 90 IDVVRGLMKFD 100 (455)
Q Consensus 90 ~~iv~~Ll~~~ 100 (455)
.+++..++.+.
T Consensus 101 ~q~i~~vlr~~ 111 (560)
T KOG0522|consen 101 EQIITEVLRHL 111 (560)
T ss_pred HHHHHHHHHHh
Confidence 87777777654
No 98
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.56 E-value=6.8e-08 Score=92.02 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=82.2
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCc
Q 012836 107 QGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNT 186 (455)
Q Consensus 107 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T 186 (455)
++.++..++.+|++.|.+..++-+.-. +.+.+..|.+.+|+||+|+..|+.+++++|++.-. ...+.+|..|+|
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k-----v~~~~kDRw~rt 575 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQ-GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACK-----VDPDPKDRWGRT 575 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHh-cccccccccccchhheeecccCceeHHHHHHHHHc-----CCCChhhccCCC
Confidence 344566799999999999999888876 88999999999999999999999999999997422 223889999999
Q ss_pred HHHHHHhcCChHHHHHHHhcC
Q 012836 187 ALHLATWKRECQVVELLLSHG 207 (455)
Q Consensus 187 ~Lh~A~~~~~~~iv~~Ll~~g 207 (455)
||.-|...++.+++++|-+.-
T Consensus 576 PlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 576 PLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred cchHhHhcCcHHHHHHHHHHh
Confidence 999999999999999997653
No 99
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.55 E-value=2.1e-07 Score=89.13 Aligned_cols=86 Identities=29% Similarity=0.389 Sum_probs=68.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhhhcccccccccC-CCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCH
Q 012836 148 VLHLAVKNNQFEVVRALVDWIRDVKKENILNMKD-KQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTA 226 (455)
Q Consensus 148 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d-~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~ 226 (455)
-||-.++.|+.+..--|+..|++. |..+ +.|+||||.|++.|+..-+++|+-+|+ |++..|.+|.||
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~------N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGA------D~~a~d~~GmtP 203 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQA------NFFHPEKGNTPLHVAAKAGQILQAELLAVYGA------DPGAQDSSGMTP 203 (669)
T ss_pred HHHHHhhcccHHHHHHHHHccccc------CCCCcccCCchhHHHHhccchhhhhHHhhccC------CCCCCCCCCCcH
Confidence 488888899988888888888887 5544 678899999999999988999988888 788899999999
Q ss_pred HHHHhhCCCCcCchhHHHHHHHh
Q 012836 227 LDVLLSFPSEAGDREIEEIFWSA 249 (455)
Q Consensus 227 l~~a~~~~~~~~~~~i~~~L~~~ 249 (455)
+++|. ..++.++.+-|.+.
T Consensus 204 ~~~AR----~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 204 VDYAR----QGGHHELAERLVEI 222 (669)
T ss_pred HHHHH----hcCchHHHHHHHHH
Confidence 99983 45666666555543
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.50 E-value=4.4e-07 Score=88.55 Aligned_cols=96 Identities=27% Similarity=0.265 Sum_probs=80.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHH
Q 012836 148 VLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTAL 227 (455)
Q Consensus 148 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l 227 (455)
-|.-|+...+...+-+|+.+|... +..-...+.+|+|+||+|+..|+..+.++|+.+|+ |+.++|..|+|+|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~--e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~------dv~~rda~g~t~l 698 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSRE--EVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGV------DVMARDAHGRTAL 698 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCch--hhhccccCCCCcchhhhhhhhcchhHHHHHHHhCc------cceecccCCchhh
Confidence 356677777888888999988654 22224567889999999999999999999999998 8999999999999
Q ss_pred HHHhhCCCCcCchhHHHHHHHhcccccc
Q 012836 228 DVLLSFPSEAGDREIEEIFWSAGAMRMR 255 (455)
Q Consensus 228 ~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 255 (455)
.+| ...+.++++++|+++|.....
T Consensus 699 ~ya----r~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 699 FYA----RQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhH----hhcccHHHHHHHHHcCCCccc
Confidence 999 466899999999999986544
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.49 E-value=3e-07 Score=89.21 Aligned_cols=90 Identities=22% Similarity=0.344 Sum_probs=76.7
Q ss_pred hHHHHHHHcCCHHHHHHHHH-cCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCC
Q 012836 45 NPLHVASAYGHVDFVKEIIR-LKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGR 123 (455)
Q Consensus 45 t~Lh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 123 (455)
-|||.++.....+-....+. .-...+...|..|.||||+|+..|+.+.++.|+..+++. ..++++|++|||.|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCC
Confidence 45999998887765555443 334456788999999999999999999999999999998 8899999999999999999
Q ss_pred HHHHHHHHHhcC
Q 012836 124 VDVVSEMLSAYG 135 (455)
Q Consensus 124 ~~~v~~Ll~~~~ 135 (455)
.+++..++.++.
T Consensus 101 ~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 101 EQIITEVLRHLK 112 (560)
T ss_pred HHHHHHHHHHhH
Confidence 999999998743
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=98.43 E-value=2.6e-07 Score=54.85 Aligned_cols=27 Identities=33% Similarity=0.764 Sum_probs=16.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccc
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQKL 103 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~ 103 (455)
|+||||+||+.|+.+++++|+++++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 556666666666666666666655543
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.41 E-value=1e-06 Score=84.58 Aligned_cols=86 Identities=20% Similarity=0.304 Sum_probs=57.1
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHH
Q 012836 46 PLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVD 125 (455)
Q Consensus 46 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 125 (455)
-||..++.|+.+..-.|+..|++........|.||||.|+..|+..-+++|+-.|+++ ...|.+|+||+.+|-..||-+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcCchH
Confidence 3666777777776666666666543344455677777777777777777777777776 666777777777777777766
Q ss_pred HHHHHHH
Q 012836 126 VVSEMLS 132 (455)
Q Consensus 126 ~v~~Ll~ 132 (455)
+.+-|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 6655554
No 104
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.37 E-value=5.5e-07 Score=54.98 Aligned_cols=27 Identities=33% Similarity=0.650 Sum_probs=14.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccc
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQKL 103 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~ 103 (455)
|+||||+|+..|+.+++++|+++++++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 455555555555555555555555444
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.29 E-value=2.6e-06 Score=83.30 Aligned_cols=89 Identities=20% Similarity=0.288 Sum_probs=39.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCc--ccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcC
Q 012836 11 RLIAAALTGDVQTLQQLFVENPL--ILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANG 88 (455)
Q Consensus 11 ~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g 88 (455)
.|..|+...|+..+..||.++.. ++.......|.|+||+||..|+..+.+.|+-.+.+ +..+|..|+|+|.||-+.|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhhcc
Confidence 34444444444444444444322 12222222344444444444444444444433333 3344444444444444444
Q ss_pred CHHHHHHHHhcC
Q 012836 89 QIDVVRGLMKFD 100 (455)
Q Consensus 89 ~~~iv~~Ll~~~ 100 (455)
..+++..|+.+|
T Consensus 706 sqec~d~llq~g 717 (749)
T KOG0705|consen 706 SQECIDVLLQYG 717 (749)
T ss_pred cHHHHHHHHHcC
Confidence 444444444443
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.22 E-value=5.4e-06 Score=85.26 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=98.8
Q ss_pred cccCHHHHHHHHcCCHHHHHHHHhcCCc--ccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHH
Q 012836 6 TRMDRRLIAAALTGDVQTLQQLFVENPL--ILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHM 83 (455)
Q Consensus 6 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 83 (455)
..++-....|+.+||...|+..+++... .+..+.+.-|.++||.|+.+.+.|++++|+++.-.. ..+|-+
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~ 94 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLL 94 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHH
Confidence 3456678899999999999999997655 444454445999999999999999999999886442 358999
Q ss_pred HHHcCCHHHHHHHHhcCccc---------cccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccc
Q 012836 84 ASANGQIDVVRGLMKFDQKL---------CHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECA 138 (455)
Q Consensus 84 Aa~~g~~~iv~~Ll~~~~~~---------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~ 138 (455)
|+..|..++|+.++.+.... ....-..+.|||.+||..++.|+++.|+.+ +.++
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k-g~~i 157 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR-GHCI 157 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc-CCCC
Confidence 99999999999999864332 112223467999999999999999999998 4443
No 107
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.11 E-value=2.5e-06 Score=89.41 Aligned_cols=133 Identities=17% Similarity=0.192 Sum_probs=93.5
Q ss_pred cCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHH-HhhhhcccccccccCCCC
Q 012836 106 LQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVD-WIRDVKKENILNMKDKQG 184 (455)
Q Consensus 106 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~d~~G 184 (455)
...-.|++.+|+++..++.-+++.+++-.+......|.+|...+|+++.. ..+..-+++. .|. -++.+|.+|
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~l-g~ewA~ll~~~~~~------ai~i~D~~G 641 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAAL-GYEWAFLPISADGV------AIDIRDRNG 641 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhc-CCceeEEEEeeccc------ccccccCCC
Confidence 34456788888888888888888888753445556677777888884444 4444433332 222 248888888
Q ss_pred CcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCCCcCchhHHHHHHHh
Q 012836 185 NTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPSEAGDREIEEIFWSA 249 (455)
Q Consensus 185 ~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ 249 (455)
+||||+|+..|+..++..|++.|+.+....|++...-.|.|+-++|. ..++..+-.+|.+.
T Consensus 642 ~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~----s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 642 WTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR----ANGHKGIAGYLSEK 702 (975)
T ss_pred CcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh----cccccchHHHHhhh
Confidence 99999998888888888888888876656666666667888888884 45666666666654
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.11 E-value=8.6e-06 Score=83.79 Aligned_cols=128 Identities=20% Similarity=0.143 Sum_probs=67.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCc---chhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHH
Q 012836 44 GNPLHVASAYGHVDFVKEIIRLKPD---FAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAI 120 (455)
Q Consensus 44 ~t~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 120 (455)
+--...|+..|+.-.|+.+++.... ..+..|.-|.++|+.|..+.|.+++++|+++.... ..+|.+|+.
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~ 97 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIA 97 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHH
Confidence 3345556666666666666654322 13444555666666666666666666665543222 235555666
Q ss_pred hCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHH
Q 012836 121 KGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVV 200 (455)
Q Consensus 121 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv 200 (455)
.|..++++.++.+ +..... ++. .+.. -...-..+-|||.+||..++.||+
T Consensus 98 ~~~v~~VE~ll~~-~~~~~~--------~~~---------------~~d~------~~~~ft~ditPliLAAh~NnyEil 147 (822)
T KOG3609|consen 98 VGSVPLVELLLVH-FVDAPY--------LER---------------SGDA------NSPHFTPDITPLMLAAHLNNFEIL 147 (822)
T ss_pred HHHHHHHHHHHhc-ccccch--------hcc---------------cccc------CcccCCCCccHHHHHHHhcchHHH
Confidence 6666666555554 111110 000 0000 011223455788888888888888
Q ss_pred HHHHhcCCC
Q 012836 201 ELLLSHGAN 209 (455)
Q Consensus 201 ~~Ll~~ga~ 209 (455)
++|+++|+.
T Consensus 148 ~~Ll~kg~~ 156 (822)
T KOG3609|consen 148 QCLLTRGHC 156 (822)
T ss_pred HHHHHcCCC
Confidence 888877775
No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.09 E-value=3e-06 Score=89.34 Aligned_cols=79 Identities=33% Similarity=0.380 Sum_probs=74.5
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCC
Q 012836 143 VQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHS 222 (455)
Q Consensus 143 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~ 222 (455)
..|.|+||.|+..+..-++++|+++|+++ |.+|..|+||||.+...|+...+..|+++|+ +.++.+.+
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~v------n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a------~~~a~~~~ 721 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADV------NALDSKGRTPLHHATASGHTSIACLLLKRGA------DPNAFDPD 721 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcc------hhhhccCCCcchhhhhhcccchhhhhccccc------cccccCcc
Confidence 36789999999999999999999999987 9999999999999999999999999999999 88999999
Q ss_pred CCCHHHHHhhC
Q 012836 223 GLTALDVLLSF 233 (455)
Q Consensus 223 g~t~l~~a~~~ 233 (455)
|++|+++|...
T Consensus 722 ~~~~l~~a~~~ 732 (785)
T KOG0521|consen 722 GKLPLDIAMEA 732 (785)
T ss_pred CcchhhHHhhh
Confidence 99999999754
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.01 E-value=5.1e-06 Score=87.23 Aligned_cols=134 Identities=16% Similarity=0.069 Sum_probs=103.4
Q ss_pred hhhcCCCCcHHHHHHHcCCHHHHHHHHhc-CccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHH
Q 012836 71 KEVNQDGFSPMHMASANGQIDVVRGLMKF-DQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVL 149 (455)
Q Consensus 71 ~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 149 (455)
....-.|++-+|+++..++...++.+++. +... ...|.+|..-+|+ |..++.+..-.++.-.+..++.+|.+|+|||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL 645 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPL 645 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCccc
Confidence 34456788999999999999999888886 3332 5567777778888 5566777777777767888889999999999
Q ss_pred HHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhc
Q 012836 150 HLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 150 h~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
|+|+..|+..++..|++.|++....-.....+..|.|+-.+|..+|+..+..+|-+.
T Consensus 646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 999999999999999988877643333344556788999999988888887777654
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.91 E-value=5.1e-05 Score=70.90 Aligned_cols=74 Identities=24% Similarity=0.280 Sum_probs=56.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHh
Q 012836 45 NPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIK 121 (455)
Q Consensus 45 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 121 (455)
--|..||+.|+.+.|+.|++.|-+ ++.+|....+||.+|+..||.++|++|+++|+-. ..-.-+|.-+ |+++.+
T Consensus 38 ~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRC-HYGALN 111 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchh-hhhhhh
Confidence 347888999999999999997766 6788888899999999999999999999988765 4344456555 344443
No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.88 E-value=4e-05 Score=71.58 Aligned_cols=124 Identities=21% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccC-CCCCcHHHH
Q 012836 112 KTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKD-KQGNTALHL 190 (455)
Q Consensus 112 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d-~~G~T~Lh~ 190 (455)
.--|..||+.|..+.++.|++ .|.++|.+|+...+||.+|+..|+..++++|+++|+-. .+| .+|.- -|+
T Consensus 37 f~elceacR~GD~d~v~~LVe-tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-------~rdtf~G~R-C~Y 107 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVE-TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-------SRDTFDGDR-CHY 107 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHH-hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-------cccccCcch-hhh
Confidence 345788999999999999998 48889999999999999999999999999999988754 333 34443 445
Q ss_pred HHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCC-CcCchhHHHHHHHhcccc
Q 012836 191 ATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPS-EAGDREIEEIFWSAGAMR 253 (455)
Q Consensus 191 A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~-~~~~~~i~~~L~~~ga~~ 253 (455)
++.+ ..|=++|++... ..+.|.+.--+-|+-..... .-+...=+.++.+.|+.-
T Consensus 108 gaLn--d~IR~mllsydi-------~KA~d~~qP~aahi~s~l~dt~l~~~~di~f~~q~g~~f 162 (516)
T KOG0511|consen 108 GALN--DRIRRMLLSYDI-------LKAFDARQPPAAHIQSSLRDTFLGCCHDIDFLQQEGANF 162 (516)
T ss_pred hhhh--HHHHHHHHHHHH-------HHHhhccCCcchHHHHHhhccccccccchHHHhhccccc
Confidence 5543 344456666532 22344444444444432211 112223345666666643
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.76 E-value=3.8e-05 Score=81.21 Aligned_cols=88 Identities=22% Similarity=0.322 Sum_probs=75.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHH
Q 012836 75 QDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVK 154 (455)
Q Consensus 75 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 154 (455)
..|.|+||.|+..|..-++++|++.++++ +..|..|++|+|.+...|+...+..++++ +++.+..+.+|.++|++|..
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~v-n~~d~~g~~plh~~~~~g~~~~~~~ll~~-~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADV-NALDSKGRTPLHHATASGHTSIACLLLKR-GADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcc-hhhhccCCCcchhhhhhcccchhhhhccc-cccccccCccCcchhhHHhh
Confidence 35789999999999999999999999996 88999999999999999999999888886 88999999999999999988
Q ss_pred cCCHHHHHHH
Q 012836 155 NNQFEVVRAL 164 (455)
Q Consensus 155 ~~~~~~v~~L 164 (455)
..+.+++-++
T Consensus 732 ~~~~d~~~l~ 741 (785)
T KOG0521|consen 732 AANADIVLLL 741 (785)
T ss_pred hccccHHHHH
Confidence 7665555444
No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.63 E-value=0.00014 Score=61.84 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=52.2
Q ss_pred hhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhc
Q 012836 70 AKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAY 134 (455)
Q Consensus 70 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~ 134 (455)
++.+|..|||||++|+..|+.+.+.+|+.++...+...|..|.+.+.+|-+.|+.+++..|.+..
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 46678888888888888888888888888885545778888888888888888888888777763
No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.59 E-value=0.00015 Score=61.65 Aligned_cols=64 Identities=20% Similarity=0.055 Sum_probs=33.3
Q ss_pred cccccccCCCcHHHHHHHcCCHHHHHHHHHHh-hhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhc
Q 012836 137 CAEDVSVQRETVLHLAVKNNQFEVVRALVDWI-RDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 137 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
++|..|..|+|+|++|+..|+.+.+.+|+++| +.+ ...|..|++++.+|-+.|..++++.|-+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v------gv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV------GVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccc------cccccccchHHHHHHhcChHHHHHHHHHH
Confidence 34455555555555555555555555555554 333 44555555555555555555555555444
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.80 E-value=0.0025 Score=62.11 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhCCC
Q 012836 156 NQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSFPS 235 (455)
Q Consensus 156 ~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~~~ 235 (455)
.-...+++|.+++...+...-....|..--|+||+|+..|..+++.+||+.|+ |+..+|..|.||.+++
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~------Dp~~kd~~Grtpy~ls----- 470 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGC------DPSTKDGAGRTPYSLS----- 470 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcC------CchhcccCCCCccccc-----
Confidence 34667788877766553333334455556799999999999999999999998 8899999999999987
Q ss_pred CcCchhHHHHHHH
Q 012836 236 EAGDREIEEIFWS 248 (455)
Q Consensus 236 ~~~~~~i~~~L~~ 248 (455)
.+.++...++.
T Consensus 471 --~nkdVk~~F~a 481 (591)
T KOG2505|consen 471 --ANKDVKSIFIA 481 (591)
T ss_pred --ccHHHHHHHHH
Confidence 35566666653
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.25 E-value=0.0071 Score=34.25 Aligned_cols=25 Identities=36% Similarity=0.709 Sum_probs=13.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCc
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQ 101 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~ 101 (455)
|.||+|+|+..++.++++.|++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4455555555555555555555443
No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.17 E-value=0.0088 Score=33.83 Aligned_cols=26 Identities=50% Similarity=0.696 Sum_probs=21.3
Q ss_pred CCCcHHHHHHhcCChHHHHHHHhcCC
Q 012836 183 QGNTALHLATWKRECQVVELLLSHGA 208 (455)
Q Consensus 183 ~G~T~Lh~A~~~~~~~iv~~Ll~~ga 208 (455)
+|.||+|+|+..++.++++.|++.|.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 36788888888888888888888776
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.52 E-value=0.25 Score=43.75 Aligned_cols=121 Identities=18% Similarity=0.276 Sum_probs=77.8
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHH-
Q 012836 114 PLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLAT- 192 (455)
Q Consensus 114 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~- 192 (455)
.|--|+...+.+-+..++..- ..-.++|-+|..++..+++-+|+..-. ...++.....- +---+.++.
T Consensus 156 sledAV~AsN~~~i~~~VtdK--------kdA~~Am~~si~~~K~dva~~lls~f~-ft~~dv~~~~~--~~ydieY~LS 224 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK--------KDAHQAMWLSIGNAKEDVALYLLSKFN-FTKQDVASMEK--ELYDIEYLLS 224 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch--------HHHHHHHHHHhcccHHHHHHHHHhhcc-eecchhhhcCc--chhhHHHHHh
Confidence 455577777777766666431 123467888888888888888886421 11222222211 112233332
Q ss_pred -hcCChHHHHHHHhcCCCCCCCccccc---cCCCCCCHHHHHhhCCCCcCchhHHHHHHHhccccc
Q 012836 193 -WKRECQVVELLLSHGANASGGLEVNA---TNHSGLTALDVLLSFPSEAGDREIEEIFWSAGAMRM 254 (455)
Q Consensus 193 -~~~~~~iv~~Ll~~ga~~~~~v~~~~---~n~~g~t~l~~a~~~~~~~~~~~i~~~L~~~ga~~~ 254 (455)
...+..+++.++++|. +++|. +-+.|.|-||-|+++ ++.+++.+|+++||.+.
T Consensus 225 ~h~a~~kvL~~Fi~~Gl-----v~vN~~F~~~NSGdtMLDNA~Ky----~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 225 EHSASYKVLEYFINRGL-----VDVNKKFQKVNSGDTMLDNAMKY----KNSEMIAFLLKYGAISG 281 (284)
T ss_pred hcCCcHHHHHHHHhccc-----cccchhhhccCCcchHHHhHHhc----CcHHHHHHHHHcCcccc
Confidence 3346788999999986 35553 457899999999755 78899999999999554
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.46 E-value=0.073 Score=52.24 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCcch-----hhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHH
Q 012836 56 VDFVKEIIRLKPDFA-----KEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAA 119 (455)
Q Consensus 56 ~~~v~~Ll~~~~~~~-----~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 119 (455)
.+.+++|.+++.+.. ...+.--.|+||+|+..|+-++|.+||+.+.++ ..+|..|+||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCcccccc
Confidence 455666666553321 111233457777777777777777777777666 667777777777765
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.00 E-value=0.78 Score=39.47 Aligned_cols=44 Identities=14% Similarity=0.211 Sum_probs=21.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHH
Q 012836 149 LHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLL 204 (455)
Q Consensus 149 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll 204 (455)
|..|+..|-...+--.+++|.++ +. ++|..|+..++.+++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~------~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNV------DI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcc------cH------HHHHHHHHhhHHHHHHHhh
Confidence 34455555555544444544443 22 4555555555555555444
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.42 E-value=1 Score=38.81 Aligned_cols=139 Identities=22% Similarity=0.085 Sum_probs=89.2
Q ss_pred cCHHHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHc
Q 012836 8 MDRRLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASAN 87 (455)
Q Consensus 8 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 87 (455)
+.-.|..|+..|-+.+++++-+.-... ....++.+-.||+..+.|+|+++-+.-.. .+-.+-.-.|...
T Consensus 46 ~~CLl~HAVk~nmL~ILqkyke~L~~~-----~~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~ 114 (192)
T PF03158_consen 46 MWCLLYHAVKYNMLSILQKYKEDLENE-----RYLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAK 114 (192)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhc
Confidence 445678888889888888876643211 11256778899999999999998544321 1123456678888
Q ss_pred CCHHHHH----HHHhcCccccccCCCC--CCCHHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHH
Q 012836 88 GQIDVVR----GLMKFDQKLCHLQGPE--RKTPLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVV 161 (455)
Q Consensus 88 g~~~iv~----~Ll~~~~~~~~~~d~~--g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v 161 (455)
.+.++.. .+.++.... ...|.. -..-|..|+..|-.+.+.+.++. |.+.+ .++|..|++.++..++
T Consensus 115 kDlsLyslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlky-gg~~~------~~vls~Av~ynhRkIL 186 (192)
T PF03158_consen 115 KDLSLYSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKY-GGNVD------IIVLSQAVKYNHRKIL 186 (192)
T ss_pred cchhHHHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHc-CCccc------HHHHHHHHHhhHHHHH
Confidence 8877632 222221111 000000 01245679999999999999987 43332 2899999999999999
Q ss_pred HHHH
Q 012836 162 RALV 165 (455)
Q Consensus 162 ~~Ll 165 (455)
.+++
T Consensus 187 ~yfi 190 (192)
T PF03158_consen 187 DYFI 190 (192)
T ss_pred HHhh
Confidence 8876
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.34 E-value=1 Score=39.97 Aligned_cols=125 Identities=21% Similarity=0.205 Sum_probs=72.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCH
Q 012836 45 NPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRV 124 (455)
Q Consensus 45 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 124 (455)
-.|--|+..-+.+-+..++....+ -.++|-+|..++..+++.+|+.+-.-. .. ..|-.....
T Consensus 155 isledAV~AsN~~~i~~~VtdKkd--------A~~Am~~si~~~K~dva~~lls~f~ft--~~--------dv~~~~~~~ 216 (284)
T PF06128_consen 155 ISLEDAVKASNYEEISNLVTDKKD--------AHQAMWLSIGNAKEDVALYLLSKFNFT--KQ--------DVASMEKEL 216 (284)
T ss_pred ccHHHHHhhcCHHHHHHHhcchHH--------HHHHHHHHhcccHHHHHHHHHhhccee--cc--------hhhhcCcch
Confidence 345666666666655555543322 235677777777777777777642110 01 112222223
Q ss_pred HHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhh-hhcccccccccCCCCCcHHHHHHhcCChHHHHHH
Q 012836 125 DVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIR-DVKKENILNMKDKQGNTALHLATWKRECQVVELL 203 (455)
Q Consensus 125 ~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~L 203 (455)
.=++++|+..+ -+..++++.+++|- ++ .---.+-+.|.|.|.-|.+.++.+++.+|
T Consensus 217 ydieY~LS~h~--------------------a~~kvL~~Fi~~Glv~v---N~~F~~~NSGdtMLDNA~Ky~~~emi~~L 273 (284)
T PF06128_consen 217 YDIEYLLSEHS--------------------ASYKVLEYFINRGLVDV---NKKFQKVNSGDTMLDNAMKYKNSEMIAFL 273 (284)
T ss_pred hhHHHHHhhcC--------------------CcHHHHHHHHhcccccc---chhhhccCCcchHHHhHHhcCcHHHHHHH
Confidence 34445554422 23556777776652 11 11235668899999999999999999999
Q ss_pred HhcCCCC
Q 012836 204 LSHGANA 210 (455)
Q Consensus 204 l~~ga~~ 210 (455)
+++|+..
T Consensus 274 lk~GA~~ 280 (284)
T PF06128_consen 274 LKYGAIS 280 (284)
T ss_pred HHcCccc
Confidence 9999853
No 124
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=89.32 E-value=0.69 Score=33.98 Aligned_cols=48 Identities=10% Similarity=0.107 Sum_probs=29.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhc
Q 012836 44 GNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKF 99 (455)
Q Consensus 44 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~ 99 (455)
...|..|+..|+.|+++.+++.+.. . ...+..|+...+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~~--~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNKP--D------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhcc--H------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3456677777777777777654311 1 2356777777777777777664
No 125
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=89.17 E-value=0.9 Score=33.36 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=37.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhc
Q 012836 79 SPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAY 134 (455)
Q Consensus 79 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~ 134 (455)
..+..|+..|+.|+++.+++.+ .. ....+..|+...+-+++++|++++
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~-------~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP-------DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc-------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 4578899999999999888654 11 145688899999999999998875
No 126
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.62 E-value=5.9 Score=29.12 Aligned_cols=47 Identities=21% Similarity=0.286 Sum_probs=35.9
Q ss_pred hhhhhhhHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHheeee
Q 012836 367 IFIFFNSVGFSLSIEMIRILTTNFPLQLELQLCFFAMYVTYTNAVITI 414 (455)
Q Consensus 367 ~F~~~n~~af~~S~~~i~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~ 414 (455)
+++++|.+||-.|+.+..+-+..+|+.++. =+..+|.+.|.+|+.+-
T Consensus 15 awi~f~waafg~s~~m~~~gi~~lPVD~w~-KGy~~MG~lfltgSt~t 61 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGLGIWLLPVDLWT-KGYWAMGILFLTGSTVT 61 (95)
T ss_pred hhHhHHHHHHHHHHHHHHHHhheechHHHH-HHHHHHHHHHHhcchhh
Confidence 468899999999999998888888877553 24447888888887433
No 127
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=72.17 E-value=10 Score=23.72 Aligned_cols=37 Identities=30% Similarity=0.381 Sum_probs=21.3
Q ss_pred eeecCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012836 412 ITIAPDGMSLFVTLTVAIMPAVIALAAYLLRQHRKRH 448 (455)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (455)
+..+|-++-...+++..+.+..+.+|++.-++.|||.
T Consensus 3 ~s~lp~GVIlVF~lVglv~i~iva~~iYRKw~aRkr~ 39 (43)
T PF08114_consen 3 MSTLPGGVILVFCLVGLVGIGIVALFIYRKWQARKRA 39 (43)
T ss_pred cccCCCCeeeehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567877554444555555555566666655666554
No 128
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=70.20 E-value=53 Score=31.32 Aligned_cols=224 Identities=8% Similarity=0.002 Sum_probs=120.2
Q ss_pred cCcccCHHHHHHHHcCCHHHHHHHHhc-CCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcC-Ccc-hhhhcCCCCcH
Q 012836 4 YSTRMDRRLIAAALTGDVQTLQQLFVE-NPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLK-PDF-AKEVNQDGFSP 80 (455)
Q Consensus 4 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~-~~~~~~~g~tp 80 (455)
.+..|...|..+...++.+....++++ .+....-..+..|.-.+-.....+..+-...+++.- +.. .-..|..|.-.
T Consensus 17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~v 96 (322)
T cd07920 17 KDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRV 96 (322)
T ss_pred CCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHH
Confidence 355667778888888888888888775 122222222233666666666677665444444331 111 12335667766
Q ss_pred HHHHHHcCCHHHHHHHHhc--CccccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcCcc-c-cccccCCCcHHHHHHHcC
Q 012836 81 MHMASANGQIDVVRGLMKF--DQKLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYGEC-A-EDVSVQRETVLHLAVKNN 156 (455)
Q Consensus 81 Lh~Aa~~g~~~iv~~Ll~~--~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~-~~~~~~g~t~Lh~A~~~~ 156 (455)
+.-+...+..+....+++. +.-..-..|..|...+..+...+..+..+.+++..-.. . -..+..|...+-......
T Consensus 97 lqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~ 176 (322)
T cd07920 97 IQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHC 176 (322)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhC
Confidence 6666666665444433332 11111346777888887777777666665555432111 1 123456666666666655
Q ss_pred CHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhC
Q 012836 157 QFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSF 233 (455)
Q Consensus 157 ~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~ 233 (455)
..+..+.+++.-.+. ..--..|..|+..+..+...+..+..+.+++.-.. .+..-..++.|...+..+...
T Consensus 177 ~~~~~~~l~~~l~~~---~~~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~---~~~~l~~~k~Gs~Vve~~l~~ 247 (322)
T cd07920 177 SEEQREPLLEEILEH---ALELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLG---NIVQLSCHKFASNVVEKCLKH 247 (322)
T ss_pred CHHHHHHHHHHHHHH---HHHHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHH---HHHHHHcCcchHHHHHHHHHH
Confidence 544433333321110 00124688999999998888776654444433110 011224566666666655443
No 129
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=63.64 E-value=15 Score=27.38 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCC
Q 012836 430 MPAVIALAAYLLRQHRKRHTEHTMEP 455 (455)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (455)
+++++++++...-.+|+|.++-.|||
T Consensus 43 iFil~VilwfvCC~kRkrsRrPIYrP 68 (94)
T PF05393_consen 43 IFILLVILWFVCCKKRKRSRRPIYRP 68 (94)
T ss_pred HHHHHHHHHHHHHHHhhhccCCcccc
Confidence 33455555666667777888777777
No 130
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=57.63 E-value=22 Score=35.93 Aligned_cols=162 Identities=16% Similarity=0.181 Sum_probs=92.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCH
Q 012836 11 RLIAAALTGDVQTLQQLFVENPLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQI 90 (455)
Q Consensus 11 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~ 90 (455)
.+..|+.+||.+.+..+++.+... ...+...|....++--..|..|++-.+.+ +-.+-+.+|...|+.
T Consensus 267 ~fk~av~~~d~~~v~~~i~~~~ll-~~i~~~~~~~i~~fL~~~G~~e~AL~~~~-----------D~~~rFeLAl~lg~L 334 (443)
T PF04053_consen 267 EFKTAVLRGDFEEVLRMIAASNLL-PNIPKDQGQSIARFLEKKGYPELALQFVT-----------DPDHRFELALQLGNL 334 (443)
T ss_dssp HHHHHHHTT-HHH-----HHHHTG-GG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-H
T ss_pred HHHHHHHcCChhhhhhhhhhhhhc-ccCChhHHHHHHHHHHHCCCHHHHHhhcC-----------ChHHHhHHHHhcCCH
Confidence 467889999999987777533211 11111125555566666666665544432 123458899999999
Q ss_pred HHHHHHHhcCccccccCCCCCCC-HHHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhh
Q 012836 91 DVVRGLMKFDQKLCHLQGPERKT-PLHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIR 169 (455)
Q Consensus 91 ~iv~~Ll~~~~~~~~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 169 (455)
+.+..+.+...+. .-+. .=..|...|+.++++.-+.+.++- ...+.+....|+.+-++.|.+.-.
T Consensus 335 ~~A~~~a~~~~~~------~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~--------~~L~lLy~~~g~~~~L~kl~~~a~ 400 (443)
T PF04053_consen 335 DIALEIAKELDDP------EKWKQLGDEALRQGNIELAEECYQKAKDF--------SGLLLLYSSTGDREKLSKLAKIAE 400 (443)
T ss_dssp HHHHHHCCCCSTH------HHHHHHHHHHHHTTBHHHHHHHHHHCT-H--------HHHHHHHHHCT-HHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcH------HHHHHHHHHHHHcCCHHHHHHHHHhhcCc--------cccHHHHHHhCCHHHHHHHHHHHH
Confidence 9888887644322 1111 223477889999999988884321 234567777888888887765321
Q ss_pred hhcccccccccCCCCCcHHHHHHhcCCh-HHHHHHHhcCC
Q 012836 170 DVKKENILNMKDKQGNTALHLATWKREC-QVVELLLSHGA 208 (455)
Q Consensus 170 ~~~~~~~~~~~d~~G~T~Lh~A~~~~~~-~iv~~Ll~~ga 208 (455)
...+-+.+++.+...|+. +++++|++.|.
T Consensus 401 ----------~~~~~n~af~~~~~lgd~~~cv~lL~~~~~ 430 (443)
T PF04053_consen 401 ----------ERGDINIAFQAALLLGDVEECVDLLIETGR 430 (443)
T ss_dssp ----------HTT-HHHHHHHHHHHT-HHHHHHHHHHTT-
T ss_pred ----------HccCHHHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 123345788888887776 67888887654
No 131
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=53.95 E-value=19 Score=29.04 Aligned_cols=21 Identities=29% Similarity=0.581 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHhhhhccc
Q 012836 432 AVIALAAYLLRQHRKRHTEHT 452 (455)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~ 452 (455)
..++++++++|.+|||...++
T Consensus 79 g~Illi~y~irR~~Kk~~~~~ 99 (122)
T PF01102_consen 79 GIILLISYCIRRLRKKSSSDV 99 (122)
T ss_dssp HHHHHHHHHHHHHS-------
T ss_pred HHHHHHHHHHHHHhccCCCCC
Confidence 344677888888888875543
No 132
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=53.95 E-value=8.3 Score=33.63 Aligned_cols=46 Identities=33% Similarity=0.367 Sum_probs=21.1
Q ss_pred CCcHHHHHHHcCCHHHHH-HHHHHhhhhcccccccccCCCCCcHHHHHH
Q 012836 145 RETVLHLAVKNNQFEVVR-ALVDWIRDVKKENILNMKDKQGNTALHLAT 192 (455)
Q Consensus 145 g~t~Lh~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~ 192 (455)
-++|||-|++-++.+++- ++++..+ +.+.++|..|.+|..+|.+|.
T Consensus 222 Te~~LHk~iki~REDVl~LYfie~da--kiP~~LNd~D~nG~~ALdiAL 268 (280)
T KOG4591|consen 222 TENPLHKAIKIEREDVLFLYFIEMDA--KIPGILNDADHNGALALDIAL 268 (280)
T ss_pred CcchhHHhhhccccceeeehhhhccc--cccccccccCCCchHHHHHHH
Confidence 344555555555544432 2233221 234445555555555555553
No 133
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=52.31 E-value=55 Score=28.17 Aligned_cols=17 Identities=12% Similarity=0.358 Sum_probs=11.9
Q ss_pred HHHHHHHHheeeecCCC
Q 012836 402 AMYVTYTNAVITIAPDG 418 (455)
Q Consensus 402 ~m~~~~~~~~~~~~~~~ 418 (455)
|++++||.++-.+.|..
T Consensus 97 sLVIaYCl~mqi~~~~~ 113 (189)
T PF05313_consen 97 SLVIAYCLSMQIYNPGA 113 (189)
T ss_pred HHHHHHHHHheeecCCC
Confidence 67778887776666653
No 134
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=50.72 E-value=2.3e+02 Score=26.93 Aligned_cols=241 Identities=7% Similarity=-0.034 Sum_probs=124.1
Q ss_pred CcccCHHHHHHHHcCCHHHHHHHHhcC-CcccCCCCCCCCChHHHHHHHcCCHHHHHHHHHcC-C-cchhhhcCCCCcHH
Q 012836 5 STRMDRRLIAAALTGDVQTLQQLFVEN-PLILHTPAFASAGNPLHVASAYGHVDFVKEIIRLK-P-DFAKEVNQDGFSPM 81 (455)
Q Consensus 5 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~-~~~~~~~~~g~tpL 81 (455)
+..|+..+......+..+....+++.- +....-..+..|.-.+-.+...+..+-...+++.- + -..-..|..|+..+
T Consensus 54 ~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vv 133 (322)
T cd07920 54 DPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVI 133 (322)
T ss_pred CccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHH
Confidence 445666677777777776655555432 12222222233666666666666554444443331 1 11223466777777
Q ss_pred HHHHHcCCHHHHHHHHhcCc--cccccCCCCCCCHHHHHHHhCCHHHHHHHHHhcC--ccccccccCCCcHHHHHHHcCC
Q 012836 82 HMASANGQIDVVRGLMKFDQ--KLCHLQGPERKTPLHFAAIKGRVDVVSEMLSAYG--ECAEDVSVQRETVLHLAVKNNQ 157 (455)
Q Consensus 82 h~Aa~~g~~~iv~~Ll~~~~--~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~~~~g~t~Lh~A~~~~~ 157 (455)
..+...++.+..+.+++.-. -..-..+..|...+.........+..+.+++..- ...-..|..|...+..+...+.
T Consensus 134 q~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~vvq~~l~~~~ 213 (322)
T cd07920 134 QKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHALELVQDQFGNYVVQHVLELGD 213 (322)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHhcCC
Confidence 77777666655444443211 1112345566666666655554443333332211 1112345678777777777776
Q ss_pred HHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCC----hHHHHHHHhcCCCCCCCccccccCCCCCCHHHHHhhC
Q 012836 158 FEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRE----CQVVELLLSHGANASGGLEVNATNHSGLTALDVLLSF 233 (455)
Q Consensus 158 ~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~----~~iv~~Ll~~ga~~~~~v~~~~~n~~g~t~l~~a~~~ 233 (455)
.+..+.+++....- ..--..+..|...+..+...+. ..+++.++..... ...+.--..|..|+-.+.-+...
T Consensus 214 ~~~~~~i~~~l~~~---~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~-~~~l~~l~~d~~Gn~Viq~~l~~ 289 (322)
T cd07920 214 PDDTSRIIEKLLGN---IVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNE-TSALDTLMKDQYGNYVIQTALDV 289 (322)
T ss_pred HHHHHHHHHHHHHH---HHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCc-hhHHHHHhCCCcccHHHHHHHHh
Confidence 55444444432110 0113567777777777776654 3455555543210 01123336677787777777655
Q ss_pred CCCcCchhHHHHHHHh
Q 012836 234 PSEAGDREIEEIFWSA 249 (455)
Q Consensus 234 ~~~~~~~~i~~~L~~~ 249 (455)
........+.+.|..+
T Consensus 290 ~~~~~~~~i~~~l~~~ 305 (322)
T cd07920 290 AKEEQRELLVEAIRPH 305 (322)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5444555666666543
No 135
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=50.33 E-value=25 Score=31.73 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=15.0
Q ss_pred cchhhhhhhhHHHHHHHHHHHH
Q 012836 364 GFGIFIFFNSVGFSLSIEMIRI 385 (455)
Q Consensus 364 ~f~~F~~~n~~af~~S~~~i~~ 385 (455)
.|.+=++||-|+|+.+-+..--
T Consensus 166 af~vAflFnwIGFlltycl~tT 187 (262)
T KOG4812|consen 166 AFIVAFLFNWIGFLLTYCLTTT 187 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4666677888888877654433
No 136
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=50.08 E-value=4.3e+02 Score=30.56 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=19.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhhh
Q 012836 148 VLHLAVKNNQFEVVRALVDWIRDV 171 (455)
Q Consensus 148 ~Lh~A~~~~~~~~v~~Ll~~g~~~ 171 (455)
.|.+|+..++.++++++.++|.+.
T Consensus 566 LlIWAvL~~R~~MA~~~W~~gee~ 589 (1381)
T KOG3614|consen 566 LLIWAVLLNRQGMAKCLWAHGEEA 589 (1381)
T ss_pred HHHHHHHhccHHHHHHHHHhchhH
Confidence 356789899999999998887664
No 137
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=48.50 E-value=1.5e+02 Score=24.75 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 012836 428 AIMPAVIALAAYLLRQHRKRHT 449 (455)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~ 449 (455)
.....+.+++.++.+++|=|.+
T Consensus 125 ~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 125 RSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred HHHHHHHHHHHHHHHhHHhhhh
Confidence 3444677888999999987754
No 138
>PTZ00370 STEVOR; Provisional
Probab=45.59 E-value=8.9 Score=35.52 Aligned_cols=17 Identities=6% Similarity=0.006 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHHHHhhh
Q 012836 307 SALLVVAVLVATTTFQF 323 (455)
Q Consensus 307 ~s~~vVA~LIaTVtFaA 323 (455)
-+|.|.+++++.+..+|
T Consensus 177 ~~CsVGSafLT~IGLaA 193 (296)
T PTZ00370 177 CSCSLGSALLTLIGLAA 193 (296)
T ss_pred EeeccHHHHHHHHHHHH
Confidence 46777777766655544
No 139
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.26 E-value=66 Score=30.93 Aligned_cols=17 Identities=18% Similarity=0.331 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHHHHhcC
Q 012836 373 SVGFSLSIEMIRILTTN 389 (455)
Q Consensus 373 ~~af~~S~~~i~~~~~~ 389 (455)
+++.+.|+.+++++.++
T Consensus 169 v~GilaSLl~Viflv~r 185 (452)
T KOG3817|consen 169 VIGILASLLVVIFLVAR 185 (452)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56778888777777664
No 140
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=44.04 E-value=2.3e+02 Score=25.15 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=31.9
Q ss_pred HHHHhhhcccCCCccccccCCCCCCCCCCCCCCCCCCccccccCCCccchhhhhhhhHHHHHHHHHHHHHhcC
Q 012836 317 ATTTFQFGVNPPGGVWQEYYKPDRKNGTTSGKAYSAGQSILGSTDPVGFGIFIFFNSVGFSLSIEMIRILTTN 389 (455)
Q Consensus 317 aTVtFaA~ft~PGG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~F~~~n~~af~~S~~~i~~~~~~ 389 (455)
.+.+|.|-+||--|+. +.|. -.|..|++.--.-|.+.+.+++.+.-+
T Consensus 104 ig~sf~AlltPDl~~~--------------------~~p~------l~~~lffitH~svfls~v~~~vhfreR 150 (236)
T COG5522 104 IGISFMALLTPDLQYL--------------------QVPW------LEFLLFFITHISVFLSAVILIVHFRER 150 (236)
T ss_pred hhHHHHHHHcCccccc--------------------cchH------HHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4558888888877764 3333 358888888877777777666666533
No 141
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=43.67 E-value=44 Score=26.99 Aligned_cols=6 Identities=0% Similarity=-0.070 Sum_probs=2.2
Q ss_pred HHHHHH
Q 012836 432 AVIALA 437 (455)
Q Consensus 432 ~~~~~~ 437 (455)
+..+++
T Consensus 63 ~~~v~~ 68 (121)
T PF11990_consen 63 ILGVFV 68 (121)
T ss_pred HHHHHH
Confidence 333333
No 142
>TIGR03750 conj_TIGR03750 conjugative transfer region protein, TIGR03750 family. Members of this protein family are found occasionally on plasmids. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition.
Probab=43.14 E-value=50 Score=26.17 Aligned_cols=22 Identities=23% Similarity=0.226 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc
Q 012836 429 IMPAVIALAAYLLRQHRKRHTE 450 (455)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~ 450 (455)
+++++++++..-.-+..||-..
T Consensus 57 ig~~l~v~~gg~~l~rlKRGrP 78 (111)
T TIGR03750 57 LGPILVVLIGGKLLARLKRGKP 78 (111)
T ss_pred HHHHHHHHHhHHHHHHHHcCCC
Confidence 3344444443333333334333
No 143
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=43.08 E-value=8 Score=35.64 Aligned_cols=7 Identities=29% Similarity=0.225 Sum_probs=0.0
Q ss_pred cchhhhh
Q 012836 364 GFGIFIF 370 (455)
Q Consensus 364 ~f~~F~~ 370 (455)
.|+.|++
T Consensus 37 l~w~~ii 43 (381)
T PF05297_consen 37 LVWFFII 43 (381)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 3455543
No 144
>PF13210 DUF4018: Domain of unknown function (DUF4018)
Probab=42.22 E-value=1.5e+02 Score=25.10 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=24.0
Q ss_pred HHhcCCcchhHHHHHHHHHHHHHHHheeeecCCCchhHHHHHHHH
Q 012836 385 ILTTNFPLQLELQLCFFAMYVTYTNAVITIAPDGMSLFVTLTVAI 429 (455)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (455)
++...+|.-|++.+-....+++|-...+---..-+++..+..+.+
T Consensus 64 if~apfP~LwkLlLl~lhImitfWlTg~NrnQqllRF~SIitIG~ 108 (192)
T PF13210_consen 64 IFYAPFPPLWKLLLLVLHIMITFWLTGANRNQQLLRFISIITIGI 108 (192)
T ss_pred HHhCCCCcHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHH
Confidence 445577766776666666666665554433333334443333333
No 145
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=40.62 E-value=23 Score=35.58 Aligned_cols=71 Identities=14% Similarity=-0.044 Sum_probs=47.4
Q ss_pred HHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHH
Q 012836 49 VASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAA 119 (455)
Q Consensus 49 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 119 (455)
.|+..|-++-...+...+...++.....++.+|+++...+|.+.+........-..+..+..|+++..+..
T Consensus 149 ~a~~lg~vs~l~~v~lk~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~~~e 219 (558)
T KOG4335|consen 149 NASCLGLVSPLLEVQLKPKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQIIDE 219 (558)
T ss_pred cccceeccCHHHHHhhccccCCchhhccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcchhhhHH
Confidence 45555555444444444444455667789999999999999988887766554444556667777766643
No 146
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=38.61 E-value=10 Score=38.65 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=42.9
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHhhhhcccccccccCCCCCcHHHHHHhcCChHHHHHHHhcCCCCCCCccccccCCC
Q 012836 143 VQRETVLHLAVKNNQFEVVRALVDWIRDVKKENILNMKDKQGNTALHLATWKRECQVVELLLSHGANASGGLEVNATNHS 222 (455)
Q Consensus 143 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~v~~~~~n~~ 222 (455)
....++++..+.....+.++.++..+... ..++..|+|+||.+...++. .+ .+...+-+
T Consensus 134 ~~~~~~~~~~~s~~~~~~~~~~l~~~~~~------~~~~~~g~t~L~~tl~~~~~--~~-------------~i~~ldl~ 192 (503)
T KOG0513|consen 134 GDLNLALRILVSGDKYSGAEVLLTKYEIA------DAREVLGNTKLHLTLTKENL--LV-------------VIPCLDLK 192 (503)
T ss_pred cccccceeeeecCccccceeecccccccc------hhhhhcCCceeeeeccCCCc--ce-------------EEEeeccC
Confidence 34567777777777777766665433322 55667899999999887766 11 23344555
Q ss_pred CCCHHHHHh
Q 012836 223 GLTALDVLL 231 (455)
Q Consensus 223 g~t~l~~a~ 231 (455)
+.+|+++..
T Consensus 193 ~~~P~lf~~ 201 (503)
T KOG0513|consen 193 SLTPNLFSI 201 (503)
T ss_pred cCCceeeee
Confidence 577776664
No 147
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=36.95 E-value=2.4e+02 Score=23.29 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=24.5
Q ss_pred HhcCCcchhHHHHHHHHHHHHHHHheeeecCCC
Q 012836 386 LTTNFPLQLELQLCFFAMYVTYTNAVITIAPDG 418 (455)
Q Consensus 386 ~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~ 418 (455)
+..+.++...+.+++.--+++|+.|=..++|..
T Consensus 24 ~~~~~sf~~~l~~sl~ltvvaY~iGDl~ILPr~ 56 (136)
T PF10710_consen 24 LFFGASFGDILLISLVLTVVAYLIGDLFILPRT 56 (136)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHheeeCC
Confidence 345677777778888888888888877777764
No 148
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=36.59 E-value=1.5e+02 Score=29.21 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012836 428 AIMPAVIALAAYLLRQHR 445 (455)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~ 445 (455)
.+..+++.++++||.+.-
T Consensus 133 ~l~i~~v~~li~fI~~i~ 150 (371)
T PF10011_consen 133 ALAILSVVLLIYFIHHIA 150 (371)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556666666666543
No 149
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=35.55 E-value=7.9 Score=39.48 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=24.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCH
Q 012836 77 GFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRV 124 (455)
Q Consensus 77 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 124 (455)
..++++..+.....+++..++. .......++.+|.++||.+...++.
T Consensus 136 ~~~~~~~~~s~~~~~~~~~~l~-~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 136 LNLALRILVSGDKYSGAEVLLT-KYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred cccceeeeecCccccceeeccc-ccccchhhhhcCCceeeeeccCCCc
Confidence 4455555555555555555555 2222244455566666666665554
No 150
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=35.01 E-value=2.3e+02 Score=27.23 Aligned_cols=27 Identities=26% Similarity=0.180 Sum_probs=18.5
Q ss_pred HhcCCcchhHHHHHHHHHHHHHHHhee
Q 012836 386 LTTNFPLQLELQLCFFAMYVTYTNAVI 412 (455)
Q Consensus 386 ~~~~~~~~~~~~~~~~~m~~~~~~~~~ 412 (455)
..+..|++....+++..+.++++.+.+
T Consensus 225 ~~s~~Plr~~~~~g~~~~~~~~~~~~~ 251 (325)
T PRK10714 225 CLTTTPLRLLSLLGSIIAIGGFSLAVL 251 (325)
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888887777766666665544
No 151
>COG2322 Predicted membrane protein [Function unknown]
Probab=31.97 E-value=3.3e+02 Score=23.33 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHhhhcccCCC
Q 012836 306 LSALLVVAVLVATTTFQFGVNPPG 329 (455)
Q Consensus 306 ~~s~~vVA~LIaTVtFaA~ft~PG 329 (455)
.-+.+.+|.++.-++=--+|.|||
T Consensus 11 ~~~vl~~a~va~~~~av~~~~P~g 34 (177)
T COG2322 11 LAAVLGLASVAVVVIAVLAFSPAG 34 (177)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCC
Confidence 556666666665555556677666
No 152
>PF10943 DUF2632: Protein of unknown function (DUF2632); InterPro: IPR024251 This is a family of potential membrane proteins that may be components of the viral envelope.
Probab=31.68 E-value=1.7e+02 Score=24.21 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHHhe
Q 012836 394 LELQLCFFAMYVTYTNAV 411 (455)
Q Consensus 394 ~~~~~~~~~m~~~~~~~~ 411 (455)
.++++++.++.+||-..-
T Consensus 70 fwlflsltslaiaywwlp 87 (233)
T PF10943_consen 70 FWLFLSLTSLAIAYWWLP 87 (233)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 467899999999997643
No 153
>PLN00151 potassium transporter; Provisional
Probab=31.37 E-value=2.2e+02 Score=31.17 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=32.9
Q ss_pred HhcCCcchhHHH--HHHHHHHHHHHHheeeecCCCchhHHHHHHHHHHHHHHHH
Q 012836 386 LTTNFPLQLELQ--LCFFAMYVTYTNAVITIAPDGMSLFVTLTVAIMPAVIALA 437 (455)
Q Consensus 386 ~~~~~~~~~~~~--~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (455)
+.++.+....+. +.+.++=++|..+...=.|++-|+-+++..+++++.+.|-
T Consensus 520 ~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~ 573 (852)
T PLN00151 520 LIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWN 573 (852)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 445555544433 3344677888888888889987777666666555444443
No 154
>PF10329 DUF2417: Region of unknown function (DUF2417); InterPro: IPR019431 This entry represents a family of fungal proteins with no known function. In some cases these proteins also contain an alpha/beta hydrolase fold (IPR000073 from INTERPRO).
Probab=29.55 E-value=4.4e+02 Score=24.04 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHheeeecCCC
Q 012836 396 LQLCFFAMYVTYTNAVITIAPDG 418 (455)
Q Consensus 396 ~~~~~~~m~~~~~~~~~~~~~~~ 418 (455)
+.+.+.+|..-.+...+.-.|+.
T Consensus 77 ~~l~~lsl~~~~~~L~Ff~vpS~ 99 (232)
T PF10329_consen 77 FDLTLLSLITNLFNLWFFGVPSK 99 (232)
T ss_pred HHHHHHHHHHHHHHHHheecCcH
Confidence 33333344333333334555553
No 155
>PF04633 Herpes_BMRF2: Herpesvirus BMRF2 protein; InterPro: IPR006727 This is a family of unknown function found in the Herpes viruses.
Probab=29.49 E-value=3.8e+02 Score=26.03 Aligned_cols=18 Identities=22% Similarity=0.178 Sum_probs=13.1
Q ss_pred HHHHHHHHhhhhcccCCC
Q 012836 438 AYLLRQHRKRHTEHTMEP 455 (455)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~ 455 (455)
.-.++..|+|+.+.+..|
T Consensus 309 gc~~~~iR~KL~r~iNgP 326 (349)
T PF04633_consen 309 GCELEIIRKKLHRAINGP 326 (349)
T ss_pred HHHHHHHHHHHHhccCCC
Confidence 445677788888887776
No 156
>PLN00149 potassium transporter; Provisional
Probab=29.24 E-value=2.3e+02 Score=30.74 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=32.3
Q ss_pred HhcCCcchhHHH--HHHHHHHHHHHHheeeecCCCchhHHHHHHHHHHHHHHHH
Q 012836 386 LTTNFPLQLELQ--LCFFAMYVTYTNAVITIAPDGMSLFVTLTVAIMPAVIALA 437 (455)
Q Consensus 386 ~~~~~~~~~~~~--~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (455)
+.++.+....+. +-+.++=+.|..+...=.|++-|+-+++...++++.+.|-
T Consensus 447 ~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~ 500 (779)
T PLN00149 447 LCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWH 500 (779)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 345555444332 2344567888888888889988877666666555444443
No 157
>PLN00148 potassium transporter; Provisional
Probab=29.17 E-value=3.3e+02 Score=29.66 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=31.8
Q ss_pred HhcCCcchhHH--HHHHHHHHHHHHHheeeecCCCchhHHHHHHHHHHHHHHH
Q 012836 386 LTTNFPLQLEL--QLCFFAMYVTYTNAVITIAPDGMSLFVTLTVAIMPAVIAL 436 (455)
Q Consensus 386 ~~~~~~~~~~~--~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (455)
+.++.+....+ .+-+.++=+.|..+...=.|++-|+-+++...++++.+.|
T Consensus 443 ~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W 495 (785)
T PLN00148 443 FVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIW 495 (785)
T ss_pred HHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence 44555544433 3334466788888888888998777766665555444443
No 158
>PF02060 ISK_Channel: Slow voltage-gated potassium channel; InterPro: IPR000369 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Two types of beta subunit (KCNE and KCNAB) are presently known to associate with voltage-gated alpha subunits (Kv, KCNQ and eag-like). However, not all combinations of alpha and beta subunits are possible. The KCNE family of K+ channel subunits are membrane glycoproteins that possess a single transmembrane (TM) domain. They share no structural relationship with the alpha subunit proteins, which possess pore forming domains. The subunits appear to have a regulatory function, modulating the kinetics and voltage dependence of the alpha subunits of voltage-dependent K+ channels. KCNE subunits are formed from short polypeptides of ~130 amino acids, and are divided into five subfamilies: KCNE1 (MinK/IsK), KCNE2 (MiRP1), KCNE3 (MiRP2), KCNE4 (MiRP3) and KCNE1L (AMMECR2). ; GO: 0005249 voltage-gated potassium channel activity, 0006811 ion transport, 0016020 membrane; PDB: 2K21_A.
Probab=28.89 E-value=1.3e+02 Score=24.25 Aligned_cols=31 Identities=6% Similarity=0.150 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 012836 421 LFVTLTVAIMPAVIALAAYLLRQHRKRHTEH 451 (455)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (455)
+.++++..++++++-+++-.+|+||.+..++
T Consensus 46 YIL~vmgfFgff~~gImlsyvRSKK~E~s~D 76 (129)
T PF02060_consen 46 YILVVMGFFGFFTVGIMLSYVRSKKREHSHD 76 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Confidence 3444455566777788888888888777654
No 159
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.28 E-value=3.7e+02 Score=29.66 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=55.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHHHHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhCCHH
Q 012836 46 PLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPMHMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKGRVD 125 (455)
Q Consensus 46 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 125 (455)
-+-.|..+.+.+-|--|++.. +.-|..++-|--..|.+++.-.+++ +.+|-+-+|...|+.|
T Consensus 599 ~FKlALi~k~ydeVl~lI~ns-------~LvGqaiIaYLqKkgypeiAL~FVk-----------D~~tRF~LaLe~gnle 660 (1202)
T KOG0292|consen 599 RFKLALLNKKYDEVLHLIKNS-------NLVGQAIIAYLQKKGYPEIALHFVK-----------DERTRFELALECGNLE 660 (1202)
T ss_pred HHHHHHHhhhhHHHHHHHHhc-------CcccHHHHHHHHhcCCcceeeeeec-----------CcchheeeehhcCCHH
Confidence 355666666665555555443 2236666666666666555433322 2344556677777777
Q ss_pred HHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHHhhh
Q 012836 126 VVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDWIRD 170 (455)
Q Consensus 126 ~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 170 (455)
++-+...+ ..+.+...+-| ..|...|+..+++...++..+
T Consensus 661 ~ale~akk-ldd~d~w~rLg----e~Al~qgn~~IaEm~yQ~~kn 700 (1202)
T KOG0292|consen 661 VALEAAKK-LDDKDVWERLG----EEALRQGNHQIAEMCYQRTKN 700 (1202)
T ss_pred HHHHHHHh-cCcHHHHHHHH----HHHHHhcchHHHHHHHHHhhh
Confidence 77666555 22233222222 234566777777777765444
No 160
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=27.83 E-value=7.9e+02 Score=26.42 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=13.5
Q ss_pred CcHHHHHHhcCChHHHHHHHhc
Q 012836 185 NTALHLATWKRECQVVELLLSH 206 (455)
Q Consensus 185 ~T~Lh~A~~~~~~~iv~~Ll~~ 206 (455)
++.|......|+.+..+...+.
T Consensus 498 ~~Ll~a~~~~g~~~~a~~~~~~ 519 (697)
T PLN03081 498 AALLTACRIHKNLELGRLAAEK 519 (697)
T ss_pred HHHHHHHHHcCCcHHHHHHHHH
Confidence 3455555677888776665543
No 161
>COG4818 Predicted membrane protein [Function unknown]
Probab=27.74 E-value=1.3e+02 Score=22.92 Aligned_cols=6 Identities=33% Similarity=0.761 Sum_probs=2.2
Q ss_pred HHHHHH
Q 012836 399 CFFAMY 404 (455)
Q Consensus 399 ~~~~m~ 404 (455)
|+++|.
T Consensus 74 wlv~my 79 (105)
T COG4818 74 WLVCMY 79 (105)
T ss_pred HHHHHH
Confidence 333333
No 162
>PHA00094 VI minor coat protein
Probab=27.51 E-value=2.7e+02 Score=21.92 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=37.8
Q ss_pred CCccccccCCCccchhhhhhhhHHHHHHHHHHHHHhc--CCcchhHHHHHHHHHHHHHHHheeeecCCCc
Q 012836 352 AGQSILGSTDPVGFGIFIFFNSVGFSLSIEMIRILTT--NFPLQLELQLCFFAMYVTYTNAVITIAPDGM 419 (455)
Q Consensus 352 ~g~~~~~~~~~~~f~~F~~~n~~af~~S~~~i~~~~~--~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~ 419 (455)
-|-|.| .+|..++..+.++-|++-..-.+-.- ...+---+.++..+...+|..+...++|...
T Consensus 5 lGIPaL-----~rfi~~la~~~~gyfa~f~tk~iarn~liisl~igLil~~~~~l~~~l~~ls~vlP~d~ 69 (112)
T PHA00094 5 LGIPAL-----ARFLGTLAANLIGYFAKFFTRGIARNALAISLFIGLILGLNSALVALLSDLASILPPDF 69 (112)
T ss_pred hCcHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Confidence 456653 45888888888877776421111000 0122234566777788889888888888764
No 163
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=27.08 E-value=3.6e+02 Score=24.35 Aligned_cols=29 Identities=7% Similarity=-0.048 Sum_probs=13.9
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCcchhHHHH
Q 012836 369 IFFNSVGFSLSIEMIRILTTNFPLQLELQL 398 (455)
Q Consensus 369 ~~~n~~af~~S~~~i~~~~~~~~~~~~~~~ 398 (455)
.-+.++.|++++.+++++ -+.|+..++.+
T Consensus 152 ~gi~aml~Vf~LF~lvmt-~g~d~m~fl~v 180 (230)
T PF03904_consen 152 KGIGAMLFVFMLFALVMT-IGSDFMDFLHV 180 (230)
T ss_pred HhHHHHHHHHHHHHHHHH-hcccchhhhhH
Confidence 334445555555444443 35555555443
No 164
>PLN00150 potassium ion transporter family protein; Provisional
Probab=26.72 E-value=2.6e+02 Score=30.41 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=32.7
Q ss_pred HhcCCcchhHH--HHHHHHHHHHHHHheeeecCCCchhHHHHHHHHHHHHHHHH
Q 012836 386 LTTNFPLQLEL--QLCFFAMYVTYTNAVITIAPDGMSLFVTLTVAIMPAVIALA 437 (455)
Q Consensus 386 ~~~~~~~~~~~--~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (455)
+.++.+....+ .+.+.++=+.|..+...=.|++-|+.+++...++++.+.|-
T Consensus 460 ~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~ 513 (779)
T PLN00150 460 IIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWH 513 (779)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHH
Confidence 34555544433 33344677888888888889988877666665555444443
No 165
>TIGR02184 Myco_arth_vir_N Mycoplasma virulence family signal region. This model represents the N-terminal region, including a probable signal sequence or signal anchor which in most instances has four consecutive Lys residues before the hydrophobic stretch, of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum.
Probab=26.13 E-value=40 Score=20.09 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=17.1
Q ss_pred chhhHHHHHHHHHHHHHhhhcc
Q 012836 304 ETLSALLVVAVLVATTTFQFGV 325 (455)
Q Consensus 304 ~t~~s~~vVA~LIaTVtFaA~f 325 (455)
+..-.+.++|.|+++++|.+.+
T Consensus 9 nkIl~~al~a~l~~S~s~g~Vi 30 (33)
T TIGR02184 9 NKIATLVIVTSLLTSLTISGVI 30 (33)
T ss_pred hheehHHHHHHHHHhheeeeEE
Confidence 4455788999999999987643
No 166
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=25.61 E-value=42 Score=29.42 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=37.6
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHH-HHH---hcCccccccccCCCcHHHHHHHcC
Q 012836 107 QGPERKTPLHFAAIKGRVDVVSE-MLS---AYGECAEDVSVQRETVLHLAVKNN 156 (455)
Q Consensus 107 ~d~~g~tpLh~A~~~g~~~~v~~-Ll~---~~~~~~~~~~~~g~t~Lh~A~~~~ 156 (455)
-|..-..|||-|+.-|+.+++-. +++ +.|...|..|.+|..+|.+|....
T Consensus 218 Id~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred HcCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 34556689999999999887743 333 245667888999999999987654
No 167
>PF10852 DUF2651: Protein of unknown function (DUF2651) ; InterPro: IPR020258 This entry contains transmembrane proteins with no known function.
Probab=25.06 E-value=1.7e+02 Score=21.74 Aligned_cols=17 Identities=12% Similarity=0.096 Sum_probs=7.8
Q ss_pred hhhhhhhHHHHHHHHHH
Q 012836 367 IFIFFNSVGFSLSIEMI 383 (455)
Q Consensus 367 ~F~~~n~~af~~S~~~i 383 (455)
+|.++=.+.+..|+.-.
T Consensus 7 vlfi~Plli~i~sI~Gt 23 (82)
T PF10852_consen 7 VLFILPLLIIIISIIGT 23 (82)
T ss_pred HHHHhhHHHHHHHHHHh
Confidence 34444444555554433
No 168
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=25.05 E-value=1.8e+02 Score=29.46 Aligned_cols=108 Identities=16% Similarity=0.157 Sum_probs=59.5
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCcchhhhcCCCCcHH-HHHHHcCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHhC
Q 012836 44 GNPLHVASAYGHVDFVKEIIRLKPDFAKEVNQDGFSPM-HMASANGQIDVVRGLMKFDQKLCHLQGPERKTPLHFAAIKG 122 (455)
Q Consensus 44 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL-h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 122 (455)
++=+.+|...|+.+.+..+.+.-.+. . -|.-| ..|...|+.++++.-..+..+. ...+.+....|
T Consensus 322 ~~rFeLAl~lg~L~~A~~~a~~~~~~-~-----~W~~Lg~~AL~~g~~~lAe~c~~k~~d~--------~~L~lLy~~~g 387 (443)
T PF04053_consen 322 DHRFELALQLGNLDIALEIAKELDDP-E-----KWKQLGDEALRQGNIELAEECYQKAKDF--------SGLLLLYSSTG 387 (443)
T ss_dssp HHHHHHHHHCT-HHHHHHHCCCCSTH-H-----HHHHHHHHHHHTTBHHHHHHHHHHCT-H--------HHHHHHHHHCT
T ss_pred HHHhHHHHhcCCHHHHHHHHHhcCcH-H-----HHHHHHHHHHHcCCHHHHHHHHHhhcCc--------cccHHHHHHhC
Confidence 45577788888877777766544321 1 12223 3455677888777777655443 23455666777
Q ss_pred CHHHHHHHHHhcCccccccccCCCcHHHHHHHcCC-HHHHHHHHHHhhh
Q 012836 123 RVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQ-FEVVRALVDWIRD 170 (455)
Q Consensus 123 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~ 170 (455)
+.+-++.|...+. ...+-..+++.+...|+ .++++.|.+.|.-
T Consensus 388 ~~~~L~kl~~~a~-----~~~~~n~af~~~~~lgd~~~cv~lL~~~~~~ 431 (443)
T PF04053_consen 388 DREKLSKLAKIAE-----ERGDINIAFQAALLLGDVEECVDLLIETGRL 431 (443)
T ss_dssp -HHHHHHHHHHHH-----HTT-HHHHHHHHHHHT-HHHHHHHHHHTT-H
T ss_pred CHHHHHHHHHHHH-----HccCHHHHHHHHHHcCCHHHHHHHHHHcCCc
Confidence 7777777765421 11223355666666666 4566777766543
No 169
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=24.64 E-value=4.7e+02 Score=22.81 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=37.3
Q ss_pred hhhHHHHHHHHHHHHHhhhcccCCCccccccCCCCCCCCCCCCCCCCCCccccccCCCccchhhhhhhhHHHHHHHHHHH
Q 012836 305 TLSALLVVAVLVATTTFQFGVNPPGGVWQEYYKPDRKNGTTSGKAYSAGQSILGSTDPVGFGIFIFFNSVGFSLSIEMIR 384 (455)
Q Consensus 305 t~~s~~vVA~LIaTVtFaA~ft~PGG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~F~~~n~~af~~S~~~i~ 384 (455)
..+++.-.++.+++.-|-|+-+.||-.+=. ...+..-=.+|.++-+.|+.+.+
T Consensus 31 ~~Ea~v~~~tm~~S~~YHacd~~~~~~~lc---------------------------~~~~~~L~~~~~~~s~~~~~vtl 83 (186)
T PF12036_consen 31 HFEAFVYTFTMFFSTFYHACDSGPGEIFLC---------------------------IMDWHRLQNIDFIGSFLSIWVTL 83 (186)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCceEEe---------------------------echHHHHHHHHHHHHHHHHHHHH
Confidence 356777778889999999987777665322 12233333466666666666666
Q ss_pred HHhcCCc
Q 012836 385 ILTTNFP 391 (455)
Q Consensus 385 ~~~~~~~ 391 (455)
+-...++
T Consensus 84 ~~~a~~~ 90 (186)
T PF12036_consen 84 CAMARLD 90 (186)
T ss_pred HHhccCC
Confidence 6555443
No 170
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=24.56 E-value=70 Score=30.29 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=31.0
Q ss_pred CccchhhhhhhhHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHH
Q 012836 362 PVGFGIFIFFNSVGFSLSIEMIRILTTNFPLQLELQLCFFAMYVTYT 408 (455)
Q Consensus 362 ~~~f~~F~~~n~~af~~S~~~i~~~~~~~~~~~~~~~~~~~m~~~~~ 408 (455)
++-|-+|=.+|.--+...+..+++++-.|-...+|.+-+.+++++|+
T Consensus 276 tPLfSfFGlfDInv~gviiil~ii~l~IF~vnSkLlWFLaG~l~tyi 322 (323)
T PHA02688 276 TPLFSFFGLFDINVIGVIIILFIIVLLIFDVNSKLLWFLAGTLFTYI 322 (323)
T ss_pred chHHHhhccchhHHHHHHHHHHHHHHHHhcCCchHHHHHHHhHHhee
Confidence 34599999999665555544444444456666777777777877775
No 171
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=24.52 E-value=3.9e+02 Score=25.38 Aligned_cols=76 Identities=20% Similarity=0.328 Sum_probs=43.7
Q ss_pred hhhhhHHHHHHHHHHHHHhc----CCcchhH-----------HHHHHHHHHHHHHHheeeecCCCchhHHHHHHHHHHHH
Q 012836 369 IFFNSVGFSLSIEMIRILTT----NFPLQLE-----------LQLCFFAMYVTYTNAVITIAPDGMSLFVTLTVAIMPAV 433 (455)
Q Consensus 369 ~~~n~~af~~S~~~i~~~~~----~~~~~~~-----------~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (455)
+.+|++|+..|+.++.+--. ++++.+. +.+...++.+.|=+.--...|..+.....+++++.-++
T Consensus 57 ml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s~~I~~EAi~R~~~P~~i~~~~ml~va~~GL~ 136 (296)
T COG1230 57 MLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAPPPIHYSGMLVVAIIGLV 136 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Confidence 67899999999877766432 2333321 23333344555554444555776665555555555566
Q ss_pred HHHHHHHHHHH
Q 012836 434 IALAAYLLRQH 444 (455)
Q Consensus 434 ~~~~~~~~~~~ 444 (455)
+.++.-++-.+
T Consensus 137 vN~~~a~ll~~ 147 (296)
T COG1230 137 VNLVSALLLHK 147 (296)
T ss_pred HHHHHHHHhhC
Confidence 66665555544
No 172
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=24.26 E-value=9.1e+02 Score=25.94 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=30.5
Q ss_pred HHHHHHhCCHHHHHHHHHhcCccccccccCCCcHHHHHHHcCCHHHHHHHHHH
Q 012836 115 LHFAAIKGRVDVVSEMLSAYGECAEDVSVQRETVLHLAVKNNQFEVVRALVDW 167 (455)
Q Consensus 115 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 167 (455)
+..-++.|+.+-+..+++..+..++... -.+.|.....+|+.+..+...+.
T Consensus 469 i~~l~r~G~~~eA~~~~~~~~~~p~~~~--~~~Ll~a~~~~g~~~~a~~~~~~ 519 (697)
T PLN03081 469 IELLGREGLLDEAYAMIRRAPFKPTVNM--WAALLTACRIHKNLELGRLAAEK 519 (697)
T ss_pred HHHHHhcCCHHHHHHHHHHCCCCCCHHH--HHHHHHHHHHcCCcHHHHHHHHH
Confidence 4445677888877777776554333221 22344445577888877776654
No 173
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=23.79 E-value=4.1e+02 Score=26.34 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhhhcccCCCccc
Q 012836 309 LLVVAVLVATTTFQFGVNPPGGVW 332 (455)
Q Consensus 309 ~~vVA~LIaTVtFaA~ft~PGG~~ 332 (455)
-+||+-|++-.+-+.++.|-|+++
T Consensus 118 atvvgfla~i~a~~lg~~p~~~~~ 141 (441)
T KOG3788|consen 118 ATVVGFLAAIAAIALGIIPEGDFD 141 (441)
T ss_pred HHHHHHHHHHHHHHhccCccCCCc
Confidence 355666666666666677666654
No 174
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=23.38 E-value=83 Score=21.14 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=17.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcC
Q 012836 11 RLIAAALTGDVQTLQQLFVEN 31 (455)
Q Consensus 11 ~L~~A~~~g~~~~v~~Ll~~~ 31 (455)
+++.|+.+||+..+|.|....
T Consensus 6 aiq~AiasGDLa~MK~l~~~a 26 (53)
T PF08898_consen 6 AIQQAIASGDLAQMKALAAQA 26 (53)
T ss_pred HHHHHHHcCcHHHHHHHHHHH
Confidence 578888888888888888754
No 175
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=23.09 E-value=3.7e+02 Score=21.00 Aligned_cols=37 Identities=11% Similarity=0.172 Sum_probs=24.9
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHh
Q 012836 369 IFFNSVGFSLSIEMIRILTTNFPLQLELQLCFFAMYVTYTNA 410 (455)
Q Consensus 369 ~~~n~~af~~S~~~i~~~~~~~~~~~~~~~~~~~m~~~~~~~ 410 (455)
=+.|+++++++++.+++ ..+++-|+++++-+.+|+-.
T Consensus 33 Dy~~~L~~~~~m~gl~m-----r~K~~aW~al~~s~~S~an~ 69 (103)
T PF03669_consen 33 DYMSFLGMIFSMAGLMM-----RNKWCAWAALFFSCQSFANM 69 (103)
T ss_pred HHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHcC
Confidence 35677888888877665 35566677777766665543
No 176
>PLN03218 maturation of RBCL 1; Provisional
Probab=22.98 E-value=2.3e+02 Score=32.29 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=9.5
Q ss_pred HHHHHHHcCCHHHHHHHHh
Q 012836 11 RLIAAALTGDVQTLQQLFV 29 (455)
Q Consensus 11 ~L~~A~~~g~~~~v~~Ll~ 29 (455)
.+...++.|+.+....+++
T Consensus 548 LI~a~~k~G~~deA~~lf~ 566 (1060)
T PLN03218 548 LISACGQSGAVDRAFDVLA 566 (1060)
T ss_pred HHHHHHHCCCHHHHHHHHH
Confidence 3444445556555555443
No 177
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=22.52 E-value=1.2e+02 Score=22.52 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012836 425 LTVAIMPAVIALAAYLLRQHR 445 (455)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~ 445 (455)
+++++.+.+++|.+-++.+++
T Consensus 12 liv~~iiaIvvW~iv~ieYrk 32 (81)
T PF00558_consen 12 LIVALIIAIVVWTIVYIEYRK 32 (81)
T ss_dssp HHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333344445555555555444
No 178
>COG4325 Predicted membrane protein [Function unknown]
Probab=21.96 E-value=3.3e+02 Score=26.81 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHHHHh
Q 012836 372 NSVGFSLSIEMIRILT 387 (455)
Q Consensus 372 n~~af~~S~~~i~~~~ 387 (455)
-+++|.+|++++.+.+
T Consensus 92 sVtg~~fSItvvalql 107 (464)
T COG4325 92 SVTGIVFSITVVALQL 107 (464)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3557888887777754
No 179
>COG3630 OadG Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit [Energy production and conversion]
Probab=21.79 E-value=2.5e+02 Score=20.92 Aligned_cols=26 Identities=12% Similarity=0.131 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCC
Q 012836 429 IMPAVIALAAYLLRQHRKRHTEHTME 454 (455)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (455)
++++.+.++++.+|.+-+-.+.-+++
T Consensus 20 ~VflfL~iLi~~~~~m~~~v~r~~pe 45 (84)
T COG3630 20 FVFLFLSILIYAMRGMGAVVRRFVPE 45 (84)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 33444455566666665544444443
No 180
>COG3201 PnuC Nicotinamide mononucleotide transporter [Coenzyme metabolism]
Probab=21.68 E-value=6e+02 Score=22.91 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=61.7
Q ss_pred chhhHHHHHHHHHHHHHhhhcccCCCccccccCCCCCCCCCCCCCCCCCCccccccCCCccchhhhhhhhHHHHHHHHHH
Q 012836 304 ETLSALLVVAVLVATTTFQFGVNPPGGVWQEYYKPDRKNGTTSGKAYSAGQSILGSTDPVGFGIFIFFNSVGFSLSIEMI 383 (455)
Q Consensus 304 ~t~~s~~vVA~LIaTVtFaA~ft~PGG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~F~~~n~~af~~S~~~i 383 (455)
-..-.+.++++++.|.+|.-++.--|+.. |-..|+.-|+.|+++-
T Consensus 113 ~k~w~~~lv~~ivg~l~f~~i~~a~g~~~-----------------------------------~p~~Ds~~~visivAq 157 (222)
T COG3201 113 AKGWLAVLVAGIVGTLAFVSILFALGDSV-----------------------------------APWWDSCTFVISIVAQ 157 (222)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHhcccC-----------------------------------CchHHHHHHHHHHHHH
Confidence 33446778888888888888766555421 0457899999999999
Q ss_pred HHHhcCCcchhHHHHH--HHHHHHHHHHheeeecCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhhhhccc
Q 012836 384 RILTTNFPLQLELQLC--FFAMYVTYTNAVITIAPDGMSLFVTLTVA-IMPAVIALAAYLLRQHRKRHTEHT 452 (455)
Q Consensus 384 ~~~~~~~~~~~~~~~~--~~~m~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 452 (455)
++++.++.=.+.++++ +.+.++=...+ .+...+... +..+....+..+.+.++.|..++.
T Consensus 158 ilm~~~y~E~wllWia~nVvsi~lw~~~~---------~~~~a~~~~~~t~l~~~~~~~w~~~~~~~~~r~l 220 (222)
T COG3201 158 ILMTRKYVENWLLWIAVNVVSVILWATAG---------VYSLALLYLLLTAIALNGSGLWINSKAARGSRAL 220 (222)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHhhHHHhhhhhhhcccccc
Confidence 9988777666666543 33322222212 111122222 223444556677777776666553
No 181
>PHA02902 putative IMV membrane protein; Provisional
Probab=21.53 E-value=1.5e+02 Score=20.71 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 012836 422 FVTLTVAIMPAVIALAAYLLRQHR 445 (455)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~ 445 (455)
+++..+++.+++++++.-.-|+|+
T Consensus 6 fvi~~v~v~Ivclliya~YrR~kc 29 (70)
T PHA02902 6 FVILAVIVIIFCLLIYAAYKRYKC 29 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455556666666666655555544
No 182
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=21.31 E-value=1.5e+02 Score=24.45 Aligned_cols=28 Identities=14% Similarity=0.400 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012836 421 LFVTLTVAIMPAVIALAAYLLRQHRKRH 448 (455)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (455)
+++++.+++.++.+++.++|..+++||.
T Consensus 32 ~tILiaIvVliiiiivli~lcssRKkKa 59 (189)
T PF05568_consen 32 YTILIAIVVLIIIIIVLIYLCSSRKKKA 59 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHH
No 183
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=21.11 E-value=3.2e+02 Score=23.55 Aligned_cols=11 Identities=0% Similarity=0.404 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 012836 398 LCFFAMYVTYT 408 (455)
Q Consensus 398 ~~~~~m~~~~~ 408 (455)
+++..|++.|+
T Consensus 84 ~alv~lv~~~v 94 (170)
T PF11241_consen 84 VALVLLVLSFV 94 (170)
T ss_pred HHHHHHHHHHH
Confidence 33334444443
No 184
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=20.84 E-value=3.1e+02 Score=25.90 Aligned_cols=21 Identities=14% Similarity=0.048 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHhcCCcchhHH
Q 012836 376 FSLSIEMIRILTTNFPLQLEL 396 (455)
Q Consensus 376 f~~S~~~i~~~~~~~~~~~~~ 396 (455)
+.+|+.++.+-....+.+..+
T Consensus 65 ~l~s~lmv~iaf~~~~~~~~~ 85 (293)
T PF03419_consen 65 LLISVLMVLIAFGPKRWRQFI 85 (293)
T ss_pred HHHHHHHHHHHhCCCcHHHHH
Confidence 456666666666555555443
No 185
>PF11364 DUF3165: Protein of unknown function (DUF3165); InterPro: IPR021506 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=20.01 E-value=2.3e+02 Score=20.90 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=12.7
Q ss_pred CCcchhHHHHHHHHHHHHHHH
Q 012836 389 NFPLQLELQLCFFAMYVTYTN 409 (455)
Q Consensus 389 ~~~~~~~~~~~~~~m~~~~~~ 409 (455)
.+.+..++++++...+++|.+
T Consensus 49 i~q~P~Eifv~~~Mi~l~y~a 69 (81)
T PF11364_consen 49 IFQLPPEIFVGLAMIVLGYFA 69 (81)
T ss_pred HHhCCHHHHHHHHHHHHHHHH
Confidence 344555666666666666654
Done!