Your job contains 1 sequence.
>012838
MKVQRLPNSKTKMAFAAIIMKKAFHSASGQLSNSPQGICNVRMSGEELLSRLLDRKWALT
SPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPL
VNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVERGLKSHLLLRGEQPQILTGYN
LISTIYGKVTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLG
QMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGT
TAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGE
IVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDAD
VVMLHTGGTLGMFGLAQRYKSSFHSLKDGAFPSNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012838
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090345 - symbol:AT3G26115 species:3702 "Arabi... 1104 7.6e-112 1
TAIR|locus:2007725 - symbol:D-CDES "AT1G48420" species:37... 97 1.8e-07 2
UNIPROTKB|P76316 - symbol:dcyD species:83333 "Escherichia... 104 4.7e-06 2
TIGR_CMR|CPS_4580 - symbol:CPS_4580 "putative D-cysteine ... 93 8.7e-06 2
UNIPROTKB|Q5LL69 - symbol:cuyA "L-cysteate sulfo-lyase" s... 99 1.2e-05 2
TIGR_CMR|SPO_A0158 - symbol:SPO_A0158 "ACC deaminase/D-cy... 99 1.2e-05 2
TIGR_CMR|SPO_2657 - symbol:SPO_2657 "ACC deaminase/D-cyst... 98 1.4e-05 2
UNIPROTKB|Q81NG1 - symbol:BAS3005 "Putative pyridoxal pho... 95 1.5e-05 2
TIGR_CMR|BA_3236 - symbol:BA_3236 "pyridoxal phosphate-de... 95 1.5e-05 2
UNIPROTKB|Q4KK38 - symbol:dcyD "D-cysteine desulfhydrase"... 100 2.7e-05 2
UNIPROTKB|Q48PM3 - symbol:dcyD "D-cysteine desulfhydrase"... 92 0.00011 2
UNIPROTKB|Q9KR99 - symbol:VC1743 "Putative uncharacterize... 91 0.00019 2
TIGR_CMR|VC_1743 - symbol:VC_1743 "hypothetical protein" ... 91 0.00019 2
>TAIR|locus:2090345 [details] [associations]
symbol:AT3G26115 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] InterPro:IPR001926 Pfam:PF00291 EMBL:CP002686
SUPFAM:SSF53686 EMBL:AK228771 IPI:IPI00530652 RefSeq:NP_974363.1
UniGene:At.37273 ProteinModelPortal:Q0WQC8
EnsemblPlants:AT3G26115.2 GeneID:822210 KEGG:ath:AT3G26115
TAIR:At3g26115 OMA:YTLAAWE Genevestigator:Q3EB01 Uniprot:Q0WQC8
Length = 433
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 230/418 (55%), Positives = 287/418 (68%)
Query: 43 MSGEELLSRLLDRKWALTSPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIM 102
+ E +S+LLDRKW L P S I QI + + G + SFLNNT P LGD+M
Sbjct: 33 IDSREFVSKLLDRKWGLQCPASPIQQISVSSVK---G---IDKFSFLNNTRPHLGDEMSK 86
Query: 103 RDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAV---- 158
+ FY++RDDLLHPLVNGNKARK+DALLPL+EDH VTDLVTCGGCQSAH AV
Sbjct: 87 SKQGSSFYILRDDLLHPLVNGNKARKLDALLPLVEDHKVTDLVTCGGCQSAHTAAVAVSC 146
Query: 159 -ERGLKSHLLLRGEQPQILTGYNLISTIYGKVTYVPRTHYAHRIEMLKSYANLVAGNNGD 217
ERGL+SHLLLRGEQP +LTGYNL+ST+YG V YVPR+ YA+R EML++YA+LVAG +G
Sbjct: 147 AERGLRSHLLLRGEQPDVLTGYNLVSTMYGNVQYVPRSRYANREEMLRTYADLVAGEDGT 206
Query: 218 VVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQY 277
V+W +I E T + +MD + R+KVLIVNEGAGDA+ALLG+FRL+Q+
Sbjct: 207 VLWAKDIVEGRDTMN------VAKMDDFSSMKTSRRKVLIVNEGAGDALALLGMFRLVQH 260
Query: 278 LSQDHLLGRKRAIKFXXXXXXXXXXXXXXXXXICLGLPWEVTAIALVDTIDGYKQQEKNL 337
LSQDHLLG+KR +KF + LGLPWE+ A+ L DT+ YK+ E +L
Sbjct: 261 LSQDHLLGKKRPVKFVVDAGTGTTAVGLGVAAMSLGLPWEINAVMLADTLKNYKRHEDHL 320
Query: 338 ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPR------KFGNVFEGEIEACHRIAQLT 391
I+EF R F + S L+ +++ W++R PR +FG V EGE+E C +IAQ T
Sbjct: 321 IAEFSRQFPGSVFCSGLDM--NQMIKWIDRQHPRNSFCSCRFGKVLEGEVEMCRKIAQET 378
Query: 392 GILVDPVYTLAAWEMAT-LLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSSFHSLKD 448
G+LVDP+YTLAAWE AT L+ DEK + VVMLHTGGTLGMFGLAQRYK+ F +LKD
Sbjct: 379 GVLVDPMYTLAAWETATELVQDEK---SSIVVMLHTGGTLGMFGLAQRYKTCFTNLKD 433
>TAIR|locus:2007725 [details] [associations]
symbol:D-CDES "AT1G48420" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008660 "1-aminocyclopropane-1-carboxylate
deaminase activity" evidence=IGI;IDA] [GO:0019148 "D-cysteine
desulfhydrase activity" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP;RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=IMP] [GO:0050897 "cobalt ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0019447
"D-cysteine catabolic process" evidence=IDA] InterPro:IPR005966
InterPro:IPR001926 Pfam:PF00291 EMBL:CP002684 GO:GO:0005829
GO:GO:0005739 GO:GO:0009507 GO:GO:0046686 GO:GO:0030170
GO:GO:0009693 GO:GO:0008660 SUPFAM:SSF53686 GO:GO:0050897
TIGRFAMs:TIGR01275 OMA:PYLVPIG GO:GO:0019148 IPI:IPI00519886
RefSeq:NP_175275.3 UniGene:At.47257 ProteinModelPortal:F4HYF3
SMR:F4HYF3 PRIDE:F4HYF3 EnsemblPlants:AT1G48420.1 GeneID:841263
KEGG:ath:AT1G48420 GO:GO:0019447 Uniprot:F4HYF3
Length = 401
Score = 97 (39.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 380 EIEACHRIAQLTGILVDPVYT-LAAWEMAT-LLSDEKLKQDADVVMLHTGGTLGMF 433
E+E ++A TG+++DPVY+ AA+ + + D K + ++ +HTGG LG++
Sbjct: 314 ELEFVKKVASSTGVILDPVYSGKAAYGLINEITKDPKCWEGRKILFIHTGGLLGLY 369
Score = 97 (39.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 33/101 (32%), Positives = 48/101 (47%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAH--ATAVERG---LKS 164
++ RDD ++GNK RK++ L+ D ++T GG QS H ATA L S
Sbjct: 78 WIKRDDFTGMELSGNKVRKLEFLMAEAVDQHADTVITIGGIQSNHCRATATASNYLNLNS 137
Query: 165 HLLLR------GEQPQILTGYNLISTIYG-KVTYVPRTHYA 198
HL+LR E P L G L+ + G V + + Y+
Sbjct: 138 HLILRTSKLLADEDPG-LVGNLLVERLVGANVHLISKEEYS 177
>UNIPROTKB|P76316 [details] [associations]
symbol:dcyD species:83333 "Escherichia coli K-12"
[GO:0046416 "D-amino acid metabolic process" evidence=IDA]
[GO:0019148 "D-cysteine desulfhydrase activity" evidence=IEA;IDA]
[GO:0006950 "response to stress" evidence=IEA;IMP] [GO:0006790
"sulfur compound metabolic process" evidence=IDA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] HAMAP:MF_01045
InterPro:IPR005966 InterPro:IPR023702 InterPro:IPR001926
Pfam:PF00291 GO:GO:0030170 eggNOG:COG2515 SUPFAM:SSF53686
GO:GO:0006950 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006790 HOGENOM:HOG000022459
KO:K05396 ProtClustDB:PRK03910 TIGRFAMs:TIGR01275 PIR:D64955
RefSeq:NP_416429.4 RefSeq:YP_490176.1 ProteinModelPortal:P76316
SMR:P76316 DIP:DIP-11847N IntAct:P76316 PaxDb:P76316 PRIDE:P76316
EnsemblBacteria:EBESCT00000002386 EnsemblBacteria:EBESCT00000014648
GeneID:12931758 GeneID:946831 KEGG:ecj:Y75_p1890 KEGG:eco:b1919
PATRIC:32119173 EchoBASE:EB3792 EcoGene:EG14038 OMA:PYLVPIG
BioCyc:EcoCyc:DCYSDESULF-MONOMER BioCyc:ECOL316407:JW5313-MONOMER
BioCyc:MetaCyc:DCYSDESULF-MONOMER Genevestigator:P76316
GO:GO:0019148 GO:GO:0046416 Uniprot:P76316
Length = 328
Score = 104 (41.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 360 EIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLL---SDEKLK 416
EI+ W + P +G + +EA +A+L GIL+DPVYT A MA L+ S ++ K
Sbjct: 249 EILLWDDYFAPG-YGVPNDEGMEAVKLLARLEGILLDPVYTGKA--MAGLIDGISQKRFK 305
Query: 417 QDADVVMLHTGGTLGMF 433
+ ++ +HTGG +F
Sbjct: 306 DEGPILFIHTGGAPALF 322
Score = 73 (30.8 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 26/81 (32%), Positives = 37/81 (45%)
Query: 107 RCFYVVRDDLLHPLVNGNKARKMDALLP-LLEDHIVTDLVTCGGCQSAHA---TAVERGL 162
R ++ RDD+ + GNK RK++ L L + T L+T G QS H AV L
Sbjct: 33 REIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADT-LITAGAIQSNHVRQTAAVAAKL 91
Query: 163 KSHLLLRGEQPQILTGYNLIS 183
H + E P T N ++
Sbjct: 92 GLHCVALLENPIGTTAENYLT 112
>TIGR_CMR|CPS_4580 [details] [associations]
symbol:CPS_4580 "putative D-cysteine desulfhydrase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0019148
"D-cysteine desulfhydrase activity" evidence=ISS] [GO:0019447
"D-cysteine catabolic process" evidence=ISS] InterPro:IPR001926
Pfam:PF00291 eggNOG:COG2515 KO:K01505 SUPFAM:SSF53686 EMBL:CP000083
GenomeReviews:CP000083_GR RefSeq:YP_271227.1 STRING:Q47VE5
GeneID:3519970 KEGG:cps:CPS_4580 PATRIC:21471983
HOGENOM:HOG000270430 OMA:GNKWFKL
BioCyc:CPSY167879:GI48-4589-MONOMER Uniprot:Q47VE5
Length = 319
Score = 93 (37.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 111 VVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVERGLKSHLL--- 167
V RDDLLH +++GNK RK+ L L+ + +T GG S H A K H +
Sbjct: 25 VKRDDLLHNIISGNKWRKLKHNLEQLKTNDYQGALTFGGSYSNHIHAFAYACKQHNIPCI 84
Query: 168 --LRGEQPQILTGYNLI-STIYG-KVTYVPRTHYAHRIE 202
+RGE + L + +G + +V R Y R E
Sbjct: 85 GVIRGEA-NYANNFTLSWARHWGMQCHFVDRKTYRRRFE 122
Score = 82 (33.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 25/108 (23%), Positives = 52/108 (48%)
Query: 332 QQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT 391
+Q + L+ + KRL L + + N + +++ R +G E +++ Q T
Sbjct: 202 KQAEYLVDDIKRL----LTEEAKNHENWKLLTNFHR---GGYGKFSEDDVKRIITFNQQT 254
Query: 392 GILVDPVYT-LAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQR 438
G+ +PVY+ + L++ + +V+LHTGG G+ G+ ++
Sbjct: 255 GVCFEPVYSGKMVLALLDLITQGYFQPQERIVLLHTGGLQGLGGMIEQ 302
>UNIPROTKB|Q5LL69 [details] [associations]
symbol:cuyA "L-cysteate sulfo-lyase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000098 "sulfur amino acid catabolic
process" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0034011 "L-cysteate sulfo-lyase activity"
evidence=IDA] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 SUPFAM:SSF53686 EMBL:CP000032
GenomeReviews:CP000032_GR GO:GO:0000098 RefSeq:YP_164989.1
ProteinModelPortal:Q5LL69 GeneID:3196642 KEGG:sil:SPOA0158
PATRIC:23381650 HOGENOM:HOG000022459 KO:K05396 OMA:DCHILLE
ProtClustDB:PRK03910 BioCyc:MetaCyc:MONOMER-15876 GO:GO:0034011
TIGRFAMs:TIGR01275 Uniprot:Q5LL69
Length = 339
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 373 FGNVFEGEIEACHRIAQLTGILVDPVYTL-AAWEMATLLSDEKLKQDADVVMLHTGGTLG 431
+G E +EA A+L IL+DPVY+ A L+ K+ VV LHTGG +
Sbjct: 264 YGIPTESGLEAIRMFAELEAILLDPVYSAKGAAGFIDLIRKGHFKKGERVVFLHTGGAVA 323
Query: 432 MFG 434
+FG
Sbjct: 324 LFG 326
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHAT-----AVERGLKS 164
++ RDD GNK RK++ L+ E ++T G QS HA A + G+
Sbjct: 34 WIKRDDCTGLSTGGNKTRKLEFLMAEAELQGADMVMTQGATQSNHARQTAAFAAKLGMDC 93
Query: 165 HLLLRGEQPQILTGYN-----LISTIYGKVT 190
H+LL YN L+ ++G T
Sbjct: 94 HILLEDRTGSNNANYNNNGNVLLDHLHGATT 124
>TIGR_CMR|SPO_A0158 [details] [associations]
symbol:SPO_A0158 "ACC deaminase/D-cysteine desulfhydrase
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 SUPFAM:SSF53686 EMBL:CP000032
GenomeReviews:CP000032_GR GO:GO:0000098 RefSeq:YP_164989.1
ProteinModelPortal:Q5LL69 GeneID:3196642 KEGG:sil:SPOA0158
PATRIC:23381650 HOGENOM:HOG000022459 KO:K05396 OMA:DCHILLE
ProtClustDB:PRK03910 BioCyc:MetaCyc:MONOMER-15876 GO:GO:0034011
TIGRFAMs:TIGR01275 Uniprot:Q5LL69
Length = 339
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 373 FGNVFEGEIEACHRIAQLTGILVDPVYTL-AAWEMATLLSDEKLKQDADVVMLHTGGTLG 431
+G E +EA A+L IL+DPVY+ A L+ K+ VV LHTGG +
Sbjct: 264 YGIPTESGLEAIRMFAELEAILLDPVYSAKGAAGFIDLIRKGHFKKGERVVFLHTGGAVA 323
Query: 432 MFG 434
+FG
Sbjct: 324 LFG 326
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHAT-----AVERGLKS 164
++ RDD GNK RK++ L+ E ++T G QS HA A + G+
Sbjct: 34 WIKRDDCTGLSTGGNKTRKLEFLMAEAELQGADMVMTQGATQSNHARQTAAFAAKLGMDC 93
Query: 165 HLLLRGEQPQILTGYN-----LISTIYGKVT 190
H+LL YN L+ ++G T
Sbjct: 94 HILLEDRTGSNNANYNNNGNVLLDHLHGATT 124
>TIGR_CMR|SPO_2657 [details] [associations]
symbol:SPO_2657 "ACC deaminase/D-cysteine desulfhydrase
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 GO:GO:0003824 SUPFAM:SSF53686 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008152 HOGENOM:HOG000022459
ProtClustDB:PRK03910 TIGRFAMs:TIGR01275 ProteinModelPortal:Q5LQ39
PATRIC:23378725 OMA:TIITQGA Uniprot:Q5LQ39
Length = 385
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 373 FGNVFEGEIEACHRIAQLTGILVDPVYTLAAWE-MATLLSDEKLKQDADVVMLHTGGTLG 431
+G E EA +A+L G+L+DPVYT A + L A++V LHTGG+
Sbjct: 311 YGLPTEAMCEAVRMLARLEGLLLDPVYTGKAMAGLIDLTRQGYFDGMANIVFLHTGGSAA 370
Query: 432 MFG 434
+FG
Sbjct: 371 LFG 373
Score = 77 (32.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/95 (33%), Positives = 42/95 (44%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA-----TAVERGLKS 164
+V RDD GNK RK++ L+ + ++T G QS HA A GL
Sbjct: 82 WVKRDDCTGLSSGGNKTRKLEFLMASACEAGADTIITQGAIQSNHARQTAAAAARLGLHC 141
Query: 165 HLLLRGEQPQILTGY-NLISTIYGKVTYVPRTHYA 198
HLLL TG +L T+ G V + R H A
Sbjct: 142 HLLLEDR-----TGAADLAYTLNGNVL-LDRLHGA 170
>UNIPROTKB|Q81NG1 [details] [associations]
symbol:BAS3005 "Putative pyridoxal phosphate-dependent
deaminase" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 GO:GO:0003824 SUPFAM:SSF53686 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008152
HOGENOM:HOG000022459 KO:K05396 ProtClustDB:PRK03910
TIGRFAMs:TIGR01275 OMA:PYLVPIG RefSeq:NP_845541.1
RefSeq:YP_019875.1 RefSeq:YP_029262.1 HSSP:O57809
ProteinModelPortal:Q81NG1 IntAct:Q81NG1 DNASU:1083934
EnsemblBacteria:EBBACT00000011656 EnsemblBacteria:EBBACT00000018695
EnsemblBacteria:EBBACT00000020370 GeneID:1083934 GeneID:2814725
GeneID:2852609 KEGG:ban:BA_3236 KEGG:bar:GBAA_3236 KEGG:bat:BAS3005
BioCyc:BANT260799:GJAJ-3067-MONOMER
BioCyc:BANT261594:GJ7F-3174-MONOMER Uniprot:Q81NG1
Length = 331
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAH-----ATAVERGLKS 164
Y RDDLL GNK RK++ L+ + L+T GG QS H A AV+ +K
Sbjct: 34 YFKRDDLLGLTAGGNKTRKLEFLVADAQAKGADTLITAGGIQSNHCRLTLAAAVKEKMKC 93
Query: 165 HLLLR-GEQPQILTGYN 180
L+L G +P+ +N
Sbjct: 94 ILVLEEGLEPEEKPDFN 110
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 381 IEACHRIAQLTGILVDPVYT-LAAWEMATLLSDEKLKQDADVVMLHTGGTLGMF 433
+EA +A+ GIL+DPVYT A + L+ ++ +++ +H+GG+ ++
Sbjct: 271 VEAVQLLAKTEGILLDPVYTGKAVAGLIDLIRKGTFNKEDNILFVHSGGSPALY 324
>TIGR_CMR|BA_3236 [details] [associations]
symbol:BA_3236 "pyridoxal phosphate-dependent deaminase,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 GO:GO:0003824 SUPFAM:SSF53686 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008152
HOGENOM:HOG000022459 KO:K05396 ProtClustDB:PRK03910
TIGRFAMs:TIGR01275 OMA:PYLVPIG RefSeq:NP_845541.1
RefSeq:YP_019875.1 RefSeq:YP_029262.1 HSSP:O57809
ProteinModelPortal:Q81NG1 IntAct:Q81NG1 DNASU:1083934
EnsemblBacteria:EBBACT00000011656 EnsemblBacteria:EBBACT00000018695
EnsemblBacteria:EBBACT00000020370 GeneID:1083934 GeneID:2814725
GeneID:2852609 KEGG:ban:BA_3236 KEGG:bar:GBAA_3236 KEGG:bat:BAS3005
BioCyc:BANT260799:GJAJ-3067-MONOMER
BioCyc:BANT261594:GJ7F-3174-MONOMER Uniprot:Q81NG1
Length = 331
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAH-----ATAVERGLKS 164
Y RDDLL GNK RK++ L+ + L+T GG QS H A AV+ +K
Sbjct: 34 YFKRDDLLGLTAGGNKTRKLEFLVADAQAKGADTLITAGGIQSNHCRLTLAAAVKEKMKC 93
Query: 165 HLLLR-GEQPQILTGYN 180
L+L G +P+ +N
Sbjct: 94 ILVLEEGLEPEEKPDFN 110
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 381 IEACHRIAQLTGILVDPVYT-LAAWEMATLLSDEKLKQDADVVMLHTGGTLGMF 433
+EA +A+ GIL+DPVYT A + L+ ++ +++ +H+GG+ ++
Sbjct: 271 VEAVQLLAKTEGILLDPVYTGKAVAGLIDLIRKGTFNKEDNILFVHSGGSPALY 324
>UNIPROTKB|Q4KK38 [details] [associations]
symbol:dcyD "D-cysteine desulfhydrase" species:220664
"Pseudomonas protegens Pf-5" [GO:0006950 "response to stress"
evidence=ISS] [GO:0019148 "D-cysteine desulfhydrase activity"
evidence=ISS] [GO:0046416 "D-amino acid metabolic process"
evidence=ISS] InterPro:IPR005966 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 eggNOG:COG2515 SUPFAM:SSF53686 GO:GO:0006950
EMBL:CP000076 GenomeReviews:CP000076_GR HOGENOM:HOG000022459
KO:K05396 ProtClustDB:PRK03910 TIGRFAMs:TIGR01275 OMA:PYLVPIG
GO:GO:0019148 GO:GO:0046416 RefSeq:YP_257395.1
ProteinModelPortal:Q4KK38 STRING:Q4KK38 World-2DPAGE:0008:Q4KK38
GeneID:3480843 KEGG:pfl:PFL_0249 PATRIC:19869625
BioCyc:PFLU220664:GIX8-250-MONOMER Uniprot:Q4KK38
Length = 331
Score = 100 (40.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 48/188 (25%), Positives = 74/188 (39%)
Query: 253 KKVLIVNEGAGDAVALLGVFRL-LQYLSQDHLLGRK-RAIKFXXXXXXXXXXXXXXXXXI 310
KK +V G +A+ LG R L+ Q G + A+ +
Sbjct: 151 KKPYLVPIGGSNALGALGYVRAGLELAQQIEDSGLEFAAVVLASGSAGTHSGLALALSEV 210
Query: 311 CLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRP 370
LP V + + + + + + + L L G L + N + W E P
Sbjct: 211 LPQLP--VIGVTVSRSEEDQRPKVQGLAERTAELLGVKLP-DAFN-----VQLWDEYFAP 262
Query: 371 RKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQ--DADVVMLHTGG 428
R +G G + A +A G+L+DPVYT A MA LL ++ D ++ LHTGG
Sbjct: 263 R-YGEPNAGTLAAVKLLASQEGLLLDPVYTGKA--MAGLLDGVGRQRFDDGPLIFLHTGG 319
Query: 429 TLGMFGLA 436
+F A
Sbjct: 320 APALFAYA 327
Score = 70 (29.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 38/119 (31%), Positives = 48/119 (40%)
Query: 107 RCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAH-----ATAVERG 161
R YV RDD + GNK RK++ L L+T G QS H A A + G
Sbjct: 33 RDVYVKRDDSTPLAMGGNKLRKLEYLAADALAQGADTLITAGAIQSNHVRQTAALAAKLG 92
Query: 162 LKSHLLLR---GEQ-PQIL-TGYNLISTIY-GKVTYVPRTHYAHRIEMLKSYANLVAGN 214
L LL G Q P L G L+ ++ KV V A E L + A + N
Sbjct: 93 LGCVALLENPTGTQDPNYLGNGNRLLLDLFDAKVELVENLDQAD--EQLHALAARLRSN 149
>UNIPROTKB|Q48PM3 [details] [associations]
symbol:dcyD "D-cysteine desulfhydrase" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0019148
"D-cysteine desulfhydrase activity" evidence=ISS] [GO:0019447
"D-cysteine catabolic process" evidence=ISS] InterPro:IPR005966
InterPro:IPR001926 Pfam:PF00291 GO:GO:0030170 eggNOG:COG2515
SUPFAM:SSF53686 EMBL:CP000058 GenomeReviews:CP000058_GR
HOGENOM:HOG000022459 KO:K05396 ProtClustDB:PRK03910
TIGRFAMs:TIGR01275 OMA:PYLVPIG GO:GO:0019148 GO:GO:0019447
RefSeq:YP_272646.1 ProteinModelPortal:Q48PM3 STRING:Q48PM3
GeneID:3558561 KEGG:psp:PSPPH_0343 PATRIC:19969712 Uniprot:Q48PM3
Length = 332
Score = 92 (37.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 364 WVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSD--EKLKQDADV 421
W E PR +G G + A +A G+L+DPVYT A M+ LL + D +
Sbjct: 256 WDEYFAPR-YGEPNAGTLAAIKLVASHEGLLLDPVYTGKA--MSGLLDGIGRQRFNDGPL 312
Query: 422 VMLHTGGTLGMF 433
+ LHTGG +F
Sbjct: 313 IFLHTGGAPALF 324
Score = 73 (30.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAH 154
DR Y+ RDD + GNK RK++ L L+T G QS H
Sbjct: 32 DRDIYIKRDDTTTLALGGNKVRKLEYLAADALAQGADTLITAGAIQSNH 80
>UNIPROTKB|Q9KR99 [details] [associations]
symbol:VC1743 "Putative uncharacterized protein VC1743"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686
GenomeReviews:AE003852_GR OMA:GNKARKF ProtClustDB:CLSK874524
EMBL:AE004252 PIR:C82161 RefSeq:NP_231379.1
ProteinModelPortal:Q9KR99 DNASU:2613748 GeneID:2613748
KEGG:vch:VC1743 PATRIC:20082540 Uniprot:Q9KR99
Length = 341
Score = 91 (37.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 109 FYVVRDDLLHPLVNGNKARKMDALLPLLEDHI--VTDLVTCGGCQS 152
FY+ RDD LHP +GNKARK L+ LLE +T L++ G Q+
Sbjct: 56 FYLKRDDKLHPHFSGNKARK---LMALLEGDFPGITTLISYGSAQA 98
Score = 72 (30.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 373 FGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGM 432
FG+++ + + + T I D +Y W + + E D +++ LH GG LG
Sbjct: 266 FGHLYPEDYQIWQALLAQTHIEFDLLYDPLMWRLLSAWRTEN--PDRNLLYLHQGGLLGN 323
Query: 433 FGLAQRYKSSF 443
+ RY+ F
Sbjct: 324 ESMLPRYQRQF 334
>TIGR_CMR|VC_1743 [details] [associations]
symbol:VC_1743 "hypothetical protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001926
Pfam:PF00291 SUPFAM:SSF53686 GenomeReviews:AE003852_GR OMA:GNKARKF
ProtClustDB:CLSK874524 EMBL:AE004252 PIR:C82161 RefSeq:NP_231379.1
ProteinModelPortal:Q9KR99 DNASU:2613748 GeneID:2613748
KEGG:vch:VC1743 PATRIC:20082540 Uniprot:Q9KR99
Length = 341
Score = 91 (37.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 109 FYVVRDDLLHPLVNGNKARKMDALLPLLEDHI--VTDLVTCGGCQS 152
FY+ RDD LHP +GNKARK L+ LLE +T L++ G Q+
Sbjct: 56 FYLKRDDKLHPHFSGNKARK---LMALLEGDFPGITTLISYGSAQA 98
Score = 72 (30.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 373 FGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGM 432
FG+++ + + + T I D +Y W + + E D +++ LH GG LG
Sbjct: 266 FGHLYPEDYQIWQALLAQTHIEFDLLYDPLMWRLLSAWRTEN--PDRNLLYLHQGGLLGN 323
Query: 433 FGLAQRYKSSF 443
+ RY+ F
Sbjct: 324 ESMLPRYQRQF 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 423 0.00084 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 621 (66 KB)
Total size of DFA: 272 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.59u 0.12s 31.71t Elapsed: 00:00:01
Total cpu time: 31.59u 0.12s 31.71t Elapsed: 00:00:01
Start: Mon May 20 23:36:39 2013 End: Mon May 20 23:36:40 2013