Query 012838
Match_columns 455
No_of_seqs 328 out of 1914
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 06:50:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012838.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012838hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2515 Acd 1-aminocyclopropan 100.0 1.8E-52 3.9E-57 404.3 24.4 312 64-439 4-323 (323)
2 PRK03910 D-cysteine desulfhydr 100.0 2.1E-50 4.6E-55 409.0 32.2 307 77-440 12-330 (331)
3 TIGR01274 ACC_deam 1-aminocycl 100.0 9E-50 2E-54 405.4 30.6 313 65-438 4-333 (337)
4 TIGR01275 ACC_deam_rel pyridox 100.0 2.3E-49 4.9E-54 398.2 31.1 302 76-438 3-310 (311)
5 PRK12390 1-aminocyclopropane-1 100.0 1.2E-49 2.6E-54 404.5 28.3 306 78-439 13-335 (337)
6 PRK14045 1-aminocyclopropane-1 100.0 3.1E-47 6.8E-52 385.5 31.1 301 77-439 18-325 (329)
7 cd06449 ACCD Aminocyclopropane 100.0 7.4E-47 1.6E-51 379.4 30.4 293 81-428 1-307 (307)
8 COG0133 TrpB Tryptophan syntha 100.0 2.6E-48 5.7E-53 375.6 17.7 351 33-439 6-390 (396)
9 PRK04346 tryptophan synthase s 100.0 1.3E-47 2.8E-52 394.6 23.6 347 35-437 10-391 (397)
10 PRK13028 tryptophan synthase s 100.0 1.2E-45 2.6E-50 380.6 27.2 344 32-437 11-395 (402)
11 PLN02618 tryptophan synthase, 100.0 1E-45 2.2E-50 381.3 23.0 351 35-438 18-405 (410)
12 PRK07591 threonine synthase; V 100.0 2.1E-44 4.5E-49 375.7 25.2 333 35-436 39-398 (421)
13 PRK13802 bifunctional indole-3 100.0 3.2E-43 6.9E-48 381.0 29.7 359 34-449 277-679 (695)
14 PRK13803 bifunctional phosphor 100.0 3.8E-43 8.3E-48 380.4 28.1 348 32-436 220-602 (610)
15 TIGR00263 trpB tryptophan synt 100.0 5.6E-43 1.2E-47 361.1 26.1 337 38-436 5-382 (385)
16 cd06448 L-Ser-dehyd Serine deh 100.0 1.8E-42 3.8E-47 348.9 24.0 286 80-436 1-310 (316)
17 PRK08197 threonine synthase; V 100.0 2.5E-42 5.4E-47 357.7 25.5 326 36-431 29-382 (394)
18 PRK06381 threonine synthase; V 100.0 5E-42 1.1E-46 346.1 26.6 288 79-430 14-319 (319)
19 PRK06260 threonine synthase; V 100.0 2.5E-42 5.3E-47 358.1 23.9 327 36-435 26-374 (397)
20 PRK12483 threonine dehydratase 100.0 3.2E-42 6.9E-47 365.2 24.9 290 79-442 36-338 (521)
21 PRK08329 threonine synthase; V 100.0 2.2E-42 4.8E-47 352.4 22.8 308 36-429 22-343 (347)
22 PLN02550 threonine dehydratase 100.0 3.1E-42 6.8E-47 367.5 24.2 290 78-438 107-406 (591)
23 PRK07048 serine/threonine dehy 100.0 2.9E-42 6.3E-47 348.2 22.5 286 79-437 23-317 (321)
24 TIGR01124 ilvA_2Cterm threonin 100.0 4.7E-42 1E-46 363.8 24.5 293 79-442 16-318 (499)
25 PRK08526 threonine dehydratase 100.0 3.9E-42 8.4E-47 356.3 22.8 292 79-442 19-319 (403)
26 PRK06110 hypothetical protein; 100.0 5.2E-42 1.1E-46 346.4 23.0 287 79-439 20-316 (322)
27 COG1171 IlvA Threonine dehydra 100.0 2.2E-42 4.8E-47 345.1 18.7 292 79-441 24-326 (347)
28 PRK07476 eutB threonine dehydr 100.0 5.4E-42 1.2E-46 346.4 20.8 283 79-437 18-314 (322)
29 PRK09224 threonine dehydratase 100.0 2.1E-41 4.6E-46 359.9 24.5 293 79-442 19-321 (504)
30 PRK06352 threonine synthase; V 100.0 1.1E-41 2.4E-46 347.6 20.3 289 77-436 25-325 (351)
31 PRK06382 threonine dehydratase 100.0 2.5E-41 5.5E-46 351.4 23.1 292 79-443 24-324 (406)
32 PLN02970 serine racemase 100.0 4.4E-41 9.5E-46 340.5 22.8 291 79-439 26-326 (328)
33 TIGR02079 THD1 threonine dehyd 100.0 5.3E-41 1.1E-45 349.0 23.7 288 79-441 15-317 (409)
34 cd01562 Thr-dehyd Threonine de 100.0 2.3E-41 5E-46 338.5 20.1 280 79-431 16-304 (304)
35 PRK06815 hypothetical protein; 100.0 6E-41 1.3E-45 338.1 22.7 283 79-437 19-314 (317)
36 PRK08198 threonine dehydratase 100.0 6.4E-41 1.4E-45 348.4 22.8 284 79-439 21-317 (404)
37 cd01561 CBS_like CBS_like: Thi 100.0 1.7E-40 3.7E-45 330.8 24.9 273 79-428 1-285 (291)
38 PRK10717 cysteine synthase A; 100.0 1.2E-40 2.6E-45 337.6 24.1 287 78-433 11-313 (330)
39 PRK05638 threonine synthase; V 100.0 1.2E-40 2.5E-45 349.9 24.6 320 35-431 21-358 (442)
40 TIGR02991 ectoine_eutB ectoine 100.0 3.1E-40 6.8E-45 332.7 26.7 284 79-436 18-312 (317)
41 TIGR01136 cysKM cysteine synth 100.0 1.5E-40 3.3E-45 332.5 23.7 276 79-432 6-294 (299)
42 TIGR01127 ilvA_1Cterm threonin 100.0 6.5E-41 1.4E-45 345.7 21.7 290 81-449 1-303 (380)
43 PRK08639 threonine dehydratase 100.0 9E-41 1.9E-45 348.6 22.1 289 79-442 24-329 (420)
44 PRK08638 threonine dehydratase 100.0 1.3E-40 2.9E-45 337.2 22.7 294 79-443 26-328 (333)
45 PRK06608 threonine dehydratase 100.0 2.8E-40 6.1E-45 335.5 24.6 286 79-442 22-322 (338)
46 PRK06450 threonine synthase; V 100.0 2.4E-40 5.1E-45 335.8 23.2 300 36-431 25-337 (338)
47 COG0031 CysK Cysteine synthase 100.0 2.2E-40 4.8E-45 325.3 21.9 281 79-441 10-299 (300)
48 PLN02569 threonine synthase 100.0 1.3E-39 2.8E-44 343.3 27.4 331 35-434 70-444 (484)
49 PRK07409 threonine synthase; V 100.0 3.2E-40 7E-45 337.4 21.6 291 77-440 28-333 (353)
50 TIGR01139 cysK cysteine syntha 100.0 7.2E-40 1.6E-44 327.4 23.5 274 79-428 6-288 (298)
51 cd06446 Trp-synth_B Tryptophan 100.0 1.2E-39 2.6E-44 334.5 24.3 304 70-433 24-363 (365)
52 PRK06721 threonine synthase; R 100.0 1E-39 2.2E-44 333.5 23.6 285 77-433 25-322 (352)
53 PRK07334 threonine dehydratase 100.0 1.3E-39 2.8E-44 338.4 23.0 286 79-441 22-318 (403)
54 cd01563 Thr-synth_1 Threonine 100.0 6.4E-40 1.4E-44 331.4 20.1 281 77-428 19-320 (324)
55 PRK08246 threonine dehydratase 100.0 4.1E-39 8.9E-44 323.7 23.5 281 79-435 22-309 (310)
56 PLN00011 cysteine synthase 100.0 6.1E-39 1.3E-43 324.2 24.7 280 78-434 15-307 (323)
57 PRK08813 threonine dehydratase 100.0 2.1E-38 4.6E-43 321.5 25.6 272 79-441 38-321 (349)
58 PRK08206 diaminopropionate amm 100.0 6.6E-39 1.4E-43 332.2 22.3 294 79-437 43-391 (399)
59 PRK02991 D-serine dehydratase; 100.0 1.8E-38 3.8E-43 331.2 25.4 305 78-443 73-437 (441)
60 PLN03013 cysteine synthase 100.0 2.4E-38 5.1E-43 326.9 24.6 286 78-446 121-418 (429)
61 PLN02556 cysteine synthase/L-3 100.0 3.9E-38 8.5E-43 322.7 25.7 282 78-434 57-349 (368)
62 TIGR01137 cysta_beta cystathio 100.0 1.8E-38 3.9E-43 334.5 23.5 284 79-434 10-308 (454)
63 TIGR01415 trpB_rel pyridoxal-p 100.0 5.1E-38 1.1E-42 326.3 26.2 318 77-436 65-413 (419)
64 TIGR01138 cysM cysteine syntha 100.0 5.3E-38 1.1E-42 312.8 24.8 261 79-427 7-279 (290)
65 PRK11761 cysM cysteine synthas 100.0 1.9E-37 4.1E-42 309.6 26.6 264 79-428 11-284 (296)
66 PLN02356 phosphateglycerate ki 100.0 7.3E-38 1.6E-42 323.2 24.3 306 79-434 52-399 (423)
67 cd00640 Trp-synth-beta_II Tryp 100.0 2.3E-37 4.9E-42 300.4 26.3 235 81-428 1-244 (244)
68 PRK12391 tryptophan synthase s 100.0 2.2E-37 4.9E-42 321.9 26.6 319 77-437 74-423 (427)
69 PLN02565 cysteine synthase 100.0 2.4E-37 5.1E-42 312.2 25.4 281 78-434 13-305 (322)
70 TIGR01747 diampropi_NH3ly diam 100.0 1.7E-37 3.6E-42 318.9 23.7 293 79-436 21-371 (376)
71 TIGR00260 thrC threonine synth 100.0 3.5E-38 7.6E-43 319.2 17.6 287 77-429 20-323 (328)
72 TIGR03844 cysteate_syn cysteat 100.0 2.1E-37 4.6E-42 320.1 23.4 316 36-429 24-379 (398)
73 KOG1250 Threonine/serine dehyd 100.0 1.5E-37 3.3E-42 308.5 19.0 284 77-435 63-359 (457)
74 cd06447 D-Ser-dehyd D-Serine d 100.0 5.2E-37 1.1E-41 316.7 23.5 294 78-430 50-401 (404)
75 TIGR02035 D_Ser_am_lyase D-ser 100.0 1.1E-36 2.4E-41 316.5 24.7 303 77-439 67-430 (431)
76 KOG1395 Tryptophan synthase be 100.0 1.3E-37 2.8E-42 304.0 15.3 346 37-436 77-455 (477)
77 TIGR03528 2_3_DAP_am_ly diamin 100.0 2.3E-36 4.9E-41 312.4 25.4 294 79-436 40-390 (396)
78 PF00291 PALP: Pyridoxal-phosp 100.0 1.4E-36 3.1E-41 303.1 21.9 285 78-427 5-306 (306)
79 KOG1251 Serine racemase [Signa 100.0 4.3E-37 9.2E-42 288.3 16.1 280 79-435 24-316 (323)
80 COG0498 ThrC Threonine synthas 100.0 1.2E-32 2.5E-37 283.0 22.3 331 35-435 27-379 (411)
81 KOG1252 Cystathionine beta-syn 100.0 1.7E-33 3.6E-38 275.8 12.9 272 79-424 51-336 (362)
82 KOG1481 Cysteine synthase [Ami 100.0 2.1E-30 4.5E-35 247.2 16.2 284 79-427 48-357 (391)
83 COG1350 Predicted alternative 99.9 4E-23 8.8E-28 201.2 21.3 313 77-437 75-424 (432)
84 PRK09225 threonine synthase; V 99.9 9.3E-22 2E-26 206.5 22.3 276 108-436 97-419 (462)
85 cd01560 Thr-synth_2 Threonine 99.9 2.6E-21 5.7E-26 203.2 21.4 278 107-436 95-423 (460)
86 COG3048 DsdA D-serine dehydrat 99.4 1E-11 2.2E-16 121.0 17.5 286 107-441 101-440 (443)
87 COG2242 CobL Precorrin-6B meth 52.3 1.5E+02 0.0033 27.8 10.0 114 287-412 32-149 (187)
88 KOG1500 Protein arginine N-met 39.3 1E+02 0.0022 31.8 7.1 55 267-327 155-212 (517)
89 PF04198 Sugar-bind: Putative 31.6 2.8E+02 0.0061 27.0 8.9 90 253-348 20-110 (255)
90 PF00391 PEP-utilizers: PEP-ut 30.1 74 0.0016 25.2 3.7 33 138-170 28-62 (80)
91 KOG2616 Pyridoxalphosphate-dep 29.3 97 0.0021 30.0 4.8 39 374-413 150-188 (266)
92 PRK12483 threonine dehydratase 25.9 7.4E+02 0.016 27.1 11.6 33 293-327 88-120 (521)
93 PRK08813 threonine dehydratase 25.4 7.6E+02 0.016 25.4 11.3 33 293-327 84-116 (349)
94 TIGR00715 precor6x_red precorr 25.2 1.3E+02 0.0029 29.5 5.2 36 136-171 193-233 (256)
95 PRK05988 formate dehydrogenase 24.9 1.5E+02 0.0032 26.9 5.1 59 382-444 42-103 (156)
96 PF06325 PrmA: Ribosomal prote 24.9 2.2E+02 0.0049 28.6 6.9 48 271-325 147-194 (295)
97 PRK06202 hypothetical protein; 24.4 85 0.0018 29.8 3.7 37 290-326 63-99 (232)
98 COG2099 CobK Precorrin-6x redu 24.3 1E+02 0.0023 30.4 4.2 35 136-170 192-231 (257)
99 COG2216 KdpB High-affinity K+ 23.7 1.3E+02 0.0029 32.8 5.1 91 79-195 426-518 (681)
100 PRK10569 NAD(P)H-dependent FMN 23.3 1.7E+02 0.0038 27.2 5.5 71 377-447 54-129 (191)
101 TIGR01124 ilvA_2Cterm threonin 22.4 8.3E+02 0.018 26.5 11.1 35 290-327 66-100 (499)
102 PF04989 CmcI: Cephalosporin h 22.2 2E+02 0.0043 27.5 5.6 45 275-324 24-69 (206)
103 PF12000 Glyco_trans_4_3: Gkyc 21.4 2.2E+02 0.0047 26.4 5.5 46 268-322 50-95 (171)
104 PRK07571 bidirectional hydroge 21.1 1.4E+02 0.003 27.6 4.2 59 382-444 55-116 (169)
105 PRK09224 threonine dehydratase 20.9 9.4E+02 0.02 26.0 11.2 33 293-327 71-103 (504)
106 PLN02550 threonine dehydratase 20.6 1.1E+03 0.023 26.4 11.6 33 293-327 160-192 (591)
107 KOG1529 Mercaptopyruvate sulfu 20.3 1.9E+02 0.0041 29.0 5.1 52 269-320 215-267 (286)
No 1
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-52 Score=404.26 Aligned_cols=312 Identities=29% Similarity=0.362 Sum_probs=261.1
Q ss_pred cccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCE
Q 012838 64 SKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTD 143 (455)
Q Consensus 64 ~~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~ 143 (455)
+.|+|+.+.+ ++|||.++ +|++ .++ |.+||+||||+.|+..||||+||+++++.+|.+.|+++
T Consensus 4 ~rf~R~~l~~-----~pTPiq~L--~rls-~~l---------g~eiYiKRDD~t~l~~gGNK~RKLefll~eal~~g~dT 66 (323)
T COG2515 4 SRFPRMELIF-----GPTPIQKL--PRLS-AHL---------GVEIYIKRDDLTGLAFGGNKIRKLEFLLGEALRKGADT 66 (323)
T ss_pred ccCCccccCC-----CCChhhhH--HHHH-Hhc---------CeEEEEEcccccccccCccHHHHHHHHHhhhhhcCCcE
Confidence 5667776644 89999999 9998 544 68999999999988789999999999999999999999
Q ss_pred EEecCchhHHHH-----HHHHhCCeEEEEecCCC-ccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCC
Q 012838 144 LVTCGGCQSAHA-----TAVERGLKSHLLLRGEQ-PQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNG 216 (455)
Q Consensus 144 VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~-~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g 216 (455)
+||+|+.||||+ +|+++|++|+.++.... .-...+|.++.+.+|+ ++.++.+.+.......+.
T Consensus 67 lvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~---------- 136 (323)
T COG2515 67 LVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEE---------- 136 (323)
T ss_pred EEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHH----------
Confidence 999999999998 35699999999997654 1123467788899999 999987643211111111
Q ss_pred CccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeC
Q 012838 217 DVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDA 296 (455)
Q Consensus 217 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpv 296 (455)
.++++...+.+||+||+|++||.+..||..+++||.+|.+.- -.+|.||+|+
T Consensus 137 ---------------------------~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~-~~fD~vVva~ 188 (323)
T COG2515 137 ---------------------------LAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQL-LKFDSVVVAP 188 (323)
T ss_pred ---------------------------HHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhc-cCCCEEEEeC
Confidence 122334568899999999999999999999999999998511 4799999999
Q ss_pred CCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeC
Q 012838 297 GTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNV 376 (455)
Q Consensus 297 GtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 376 (455)
|||||.+|+..++..++++++||||.+.++....+.++..+....++.++.. .+..+.+.++++.++|+++
T Consensus 189 gs~gT~AGl~~g~~~~~~~~~ViG~~v~~~~~~~~~qv~~L~~~~a~~~~~~---------~~~~v~~~~dy~~~~Yg~p 259 (323)
T COG2515 189 GSGGTHAGLLVGLAQLGPDVEVIGIDVSADPEKLKEQVLNLAQATAELLGLG---------SEADVLLSDDYHHPGYGKP 259 (323)
T ss_pred CCcchHHHHHHHhhhccCCCceEEEeecCCHHHHHHHHHHHHHHHHHHcCCC---------CCceEEEEecccCCccCCc
Confidence 9999999999999999999999999999988877777777777777766542 1234567888999999999
Q ss_pred CHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCCcchhhhHHHH
Q 012838 377 FEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 377 d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
++|.+++++.+++.|||++||+|++++|.+++++++++ ++.+.+|++|||||.+++++|.+||
T Consensus 260 ~~e~~e~i~~~~~~eGillDpVYtgKam~Glid~~~k~~f~~~~~vLfiHtGG~~gl~~y~~~~ 323 (323)
T COG2515 260 NEEDIEAIKLLARLEGILLDPVYTGKAMYGLIDLARKGEFPDGSPVLFIHTGGAPGLFAYSPRL 323 (323)
T ss_pred CHHHHHHHHHHHHhhCcccccccchHHHHHHHHHHhcccCCCCCceEEEEcCCccchhcccccC
Confidence 99999999999999999999999999999999998875 6677889999999999999987764
No 2
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=100.00 E-value=2.1e-50 Score=409.04 Aligned_cols=307 Identities=26% Similarity=0.357 Sum_probs=242.7
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha- 155 (455)
..++|||+++ ++|+ +.+ |.+||+|+||+|++++||||+|++.+++.+|+++|.++|||+|+++|||+
T Consensus 12 ~~~~TPl~~~--~~l~-~~~---------g~~i~~K~E~lnp~g~gs~K~R~~~~~l~~a~~~g~~~vvt~g~s~gN~g~ 79 (331)
T PRK03910 12 AGLPTPLEPL--PRLS-AAL---------GPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHAR 79 (331)
T ss_pred cCCCCCceEh--hhhh-Hhh---------CCcEEEEeccCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCcchhHHHH
Confidence 4599999999 8887 433 57999999999865457999999999999999999999999998889988
Q ss_pred ----HHHHhCCeEEEEecCCCccccc-----hhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhh
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILT-----GYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIF 225 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~-----~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~ 225 (455)
+|+.+|++|+||||+..+..+. .|...++.||| |+.+++. +...+.....+
T Consensus 80 alA~~a~~~G~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~~~~a----------------- 140 (331)
T PRK03910 80 QTAAAAAKLGLKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAG--TDMDAQLEELA----------------- 140 (331)
T ss_pred HHHHHHHHhCCcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCcc--chHHHHHHHHH-----------------
Confidence 3569999999999988764332 46667899999 9999864 22112211111
Q ss_pred HHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHH
Q 012838 226 EASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGL 305 (455)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl 305 (455)
+++....+..|++|+|+.||.+.+||.+++.||++|+......||+||+|+|||||++|+
T Consensus 141 --------------------~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi 200 (331)
T PRK03910 141 --------------------EELRAQGRRPYVIPVGGSNALGALGYVACALEIAQQLAEGGVDFDAVVVASGSGGTHAGL 200 (331)
T ss_pred --------------------HHHHHcCCceEEECCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHH
Confidence 112233445688999999999999999999999999831112699999999999999999
Q ss_pred HHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 306 GLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 306 ~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
+++|++++++++|||||++++.....+.......++++.++. +.. +....+.+++++.++.|.|+|+|++++++
T Consensus 201 ~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~~a~~~g~---~~~---~~~~~~~~~~~~~~~~~~v~d~e~~~~~~ 274 (331)
T PRK03910 201 AAGLAALGPDIPVIGVTVSRSAAEQEPKVAKLAQATAELLGL---PTE---IPRADIRLWDDYVGPGYGVPTDEMLEAVK 274 (331)
T ss_pred HHHHHHhCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHcCC---Ccc---CCcccEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999987654443322333444444432 210 12234567888899999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCCcchhhhHHHHH
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGTLGMFGLAQRYK 440 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~~~~~~~~~ry~ 440 (455)
+|++++||++||+|+|+++++++++.++. +.++++||+||||||.|+++++++|.
T Consensus 275 ~l~~~~gi~~ep~ysg~~~aa~~~~~~~~~~~~~~~Vv~i~tGG~~~~~~~~~~~~ 330 (331)
T PRK03910 275 LLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAPALFAYADAFA 330 (331)
T ss_pred HHHHHcCCccccccHHHHHHHHHHHHHcCCCCCCCeEEEEECCChHhhhhhhhhhc
Confidence 99999999999999999999999987653 44678999999999999999999884
No 3
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=100.00 E-value=9e-50 Score=405.37 Aligned_cols=313 Identities=23% Similarity=0.284 Sum_probs=240.1
Q ss_pred ccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCC-cccchhhhHHhhHHHHHhCCCCE
Q 012838 65 KIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPL-VNGNKARKMDALLPLLEDHIVTD 143 (455)
Q Consensus 65 ~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~-~GsnK~Rkl~~~l~~A~~~G~~~ 143 (455)
.++++.+. -|+|||+++ ++++ +.+|. +.+||+||||+|+++ +||||+|++.+++.+|+++|+++
T Consensus 4 ~~~~~~l~-----~g~TPl~~~--~~l~-~~~g~-------~~~l~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~~~ 68 (337)
T TIGR01274 4 RFPRYPLT-----FGPSPIHPL--PRLS-QHLGG-------KVTLYAKREDCNSGLAFGGNKTRKLEYLIPDAQAQGCTT 68 (337)
T ss_pred cCCccccC-----CCCCCceEh--HhhH-HhcCC-------CceEEEEccCCcCCcCccchHHHHHHHHHHHHHHcCCCE
Confidence 44555543 399999999 8888 54431 359999999998653 59999999999999999999999
Q ss_pred EEecCchhHHHH-----HHHHhCCeEEEEecCCCc-cc----cchhhHHHHhCCc-EEEeCCCchh--hHHHHHHHHhhh
Q 012838 144 LVTCGGCQSAHA-----TAVERGLKSHLLLRGEQP-QI----LTGYNLISTIYGK-VTYVPRTHYA--HRIEMLKSYANL 210 (455)
Q Consensus 144 VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~-~~----~~~~~~~~~~~GA-V~~v~~~~~~--~~~~~~~~~A~~ 210 (455)
|+++|+++|||+ +|+++|++|+||||+..+ .. +..|..+|+.||| |+.|+.. ++ .++...++
T Consensus 69 vvs~ggs~gN~g~alA~~a~~~Gl~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~-~~~~~~~~~~~a---- 143 (337)
T TIGR01274 69 LVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDG-FDIGHRNSWERA---- 143 (337)
T ss_pred EEECCCCcchHHHHHHHHHHHcCCcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCc-ccccchHHHHHH----
Confidence 999988899988 366999999999997542 11 2357778999999 9988753 32 11111100
Q ss_pred hhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCC-CcHHHHHHHHHHHHHHHHHHH-cCCCC
Q 012838 211 VAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGA-GDAVALLGVFRLLQYLSQDHL-LGRKR 288 (455)
Q Consensus 211 la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~-~np~~~~G~~t~~~Ei~eq~~-~g~~~ 288 (455)
..++.+.++..|++|.+. .+|.+++|+.++++||++|+. .+ ..
T Consensus 144 ----------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~G~~~~~~Ei~eq~~~~~-~~ 188 (337)
T TIGR01274 144 ----------------------------------LEEVRGAGGKPYPIPAGCSDHPLGGLGFVGFAFEVREQEGELG-FK 188 (337)
T ss_pred ----------------------------------HHHHHhcCCceEEeCCCCCCCccchhHHHHHHHHHHHHHHhcC-CC
Confidence 001112234457888884 479999999999999999974 33 37
Q ss_pred CCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeec
Q 012838 289 AIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERC 368 (455)
Q Consensus 289 pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~ 368 (455)
||+||+|+|||||++|++++|+++++.++|||||++++..............+++.++.. ... ....+.+..++
T Consensus 189 ~D~vvv~vGtGgt~aGl~~~~~~~~~~~~vigV~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~---~~~~~~~~~~~ 262 (337)
T TIGR01274 189 FDYVVVCSVTGSTQAGMVAGFAADGRKDRVIGIDASATPEQTRAQILRIARNTAEKIGLE---RDI---TEDDVVLDTRF 262 (337)
T ss_pred CCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHhCCC---CCc---CccceEEeccc
Confidence 999999999999999999999999999999999999986543333223334444444421 110 11224567778
Q ss_pred cCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCCcchhhhHHH
Q 012838 369 RPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGTLGMFGLAQR 438 (455)
Q Consensus 369 ~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~~~~~~~~~r 438 (455)
+++.|+|+|+|++++++++++++||++||+|||++++|+++++++. +.++++||+|||||.++++++.+.
T Consensus 263 ~~~~~~v~d~e~~~a~~~la~~eGi~~ep~ytg~~~aa~~~~~~~g~~~~~~~vv~~htGG~~~~~~~~~~ 333 (337)
T TIGR01274 263 AYPEYGVPNEGTLEAIRLCAKMEGVLTDPVYEGKSMHGMIEMIRRGEFKEGSNVLYAHLGGAPALNAYSFL 333 (337)
T ss_pred cCCCcCCCCHHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHhcCCCCCCCEEEEEeCCChhhhhhhHHH
Confidence 8999999999999999999999999999999999999999998764 677899999999999999996543
No 4
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=100.00 E-value=2.3e-49 Score=398.17 Aligned_cols=302 Identities=23% Similarity=0.311 Sum_probs=233.5
Q ss_pred cccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH
Q 012838 76 EKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA 155 (455)
Q Consensus 76 ~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha 155 (455)
+...+|||+++ ++|+ +.. |.+||+||||+|++.+||||+|++.+++.+|+++|+++||++|+++|||+
T Consensus 3 ~~~~~TPl~~~--~~l~-~~~---------g~~l~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~g~~~vv~~g~ssGN~g 70 (311)
T TIGR01275 3 LIPWPTPIQYL--PRIS-REI---------GAEIYIKRDDLTGLGIGGNKIRKLEYLLADALSKGADTVITVGAIQSNHA 70 (311)
T ss_pred CCCCCCcceec--hhhh-hhc---------CCeEEEEeccCcCCCCCchhHHHHHHHHHHHHHcCCCEEEEcCCchhHHH
Confidence 45689999999 8887 322 67999999999843348999999999999999999999999988889998
Q ss_pred -----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 -----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 -----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|+||||+..+ +..+..+++.||+ |+.+++..|++..+.... +
T Consensus 71 ~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~~~----~------------------ 126 (311)
T TIGR01275 71 RATALAAKKLGLDAVLVLREKEE--LNGNLLLDKLMGAETRVYSAEEYFEIMKYAEE----L------------------ 126 (311)
T ss_pred HHHHHHHHHhCCceEEEecCCcc--CCCCHHHHHHcCCEEEEECchhhhhhHHHHHH----H------------------
Confidence 356999999999998642 2235566799999 999986445433222211 1
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
++++.+.++.+|++|+++.||.+.+|++++++||++|+. ++..||+||+|+|||||++|++++|
T Consensus 127 ---------------~~~~~~~~~~~~~~p~~~~~~~~~~g~~~~~~EI~~q~~-~~~~~D~vv~~vGtGgt~~Gi~~~l 190 (311)
T TIGR01275 127 ---------------AEELEKEGRKPYVIPVGGSNSLGTLGYVEAVLEIATQLE-SEVKFDSIVVAAGSGGTIAGLSLGL 190 (311)
T ss_pred ---------------HHHHHhcCCCeEEECCCCCcHHHHHHHHHHHHHHHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 111122344678999999999999999999999999973 2237999999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
++++++++||||++++.............+.+.+.++... ...+.+++++.+..|.|+|+|++++|++|++
T Consensus 191 k~~~~~~~vigV~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~v~d~e~~~~~~~la~ 261 (311)
T TIGR01275 191 SILNEDIRPVGVAVGRFGEDMTDKFVNLVKEIAEGLEVKA---------SEVIPELDDYSGPGYGKPTSEVAEIVKKVAS 261 (311)
T ss_pred HHhCCCCcEEEEEecccHHHHHHHHHHHHHHHHHHhCCCC---------CCCEEEECCcccCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999876532222222222334444443210 1245566777888999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHH
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQR 438 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~r 438 (455)
++||++||+|+|++++++++++++...++++||+||||||++++++.++
T Consensus 262 ~~gi~vep~~sg~~~aa~~~~~~~~~~~~~~vv~i~tGG~~g~~~~~~~ 310 (311)
T TIGR01275 262 REGIILDPVYTGKAFYGLIDLIRKGELGEKGILFIHTGGISGLFAYGDK 310 (311)
T ss_pred HhCCccCcchHHHHHHHHHHHHHhCCCCCCCEEEEECCCcccccccccc
Confidence 9999999998999999999887653224679999999999999987654
No 5
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=100.00 E-value=1.2e-49 Score=404.54 Aligned_cols=306 Identities=25% Similarity=0.294 Sum_probs=236.0
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCC-ceEEEEeCCCCCCC-cccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDED-RCFYVVRDDLLHPL-VNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA 155 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g-~~lylKrEdl~~p~-~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha 155 (455)
.++|||+++ ++++ +.+| . .+||+||||+|+++ +||||+|++.+++.+|+++|+++|+++|+++|||+
T Consensus 13 ~g~TPL~~~--~~l~-~~~g--------~~~~v~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~~~vvs~G~s~GN~g 81 (337)
T PRK12390 13 FGPTPIHPL--KRLS-AHLG--------GKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNHT 81 (337)
T ss_pred CCCCcceeH--HHHH-HHhC--------CCCeEEEEeCCCCCCCCccchhHHHHHHHHHHHHHcCCCEEEEeCCCccHHH
Confidence 499999999 8877 4332 2 68999999998542 49999999999999999999999999998999998
Q ss_pred -----HHHHhCCeEEEEecCCCcc-----ccchhhHHHHhCCc-EEEeCCCchhh-HHHHHHHHhhhhhcCCCCccchhh
Q 012838 156 -----TAVERGLKSHLLLRGEQPQ-----ILTGYNLISTIYGK-VTYVPRTHYAH-RIEMLKSYANLVAGNNGDVVWCNE 223 (455)
Q Consensus 156 -----~Aa~~Gl~~~iv~~~~~~~-----~~~~~~~~~~~~GA-V~~v~~~~~~~-~~~~~~~~A~~la~~~g~~~w~~~ 223 (455)
+|+++|++|+|||+...|. .+..|..+++.||| |+.|+.. ++. ..+..+. +.
T Consensus 82 ~alA~aa~~~G~~~~iv~~~~~p~~~~~~~~~~~~~~~~~~GA~v~~v~~~-~~~~~~~~~~~-~~-------------- 145 (337)
T PRK12390 82 RQVAAVAAHLGMKCVLVQENWVNYEDAVYDRVGNILLSRIMGADVRLVPDG-FDIGIRKSWED-AL-------------- 145 (337)
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCCccchhhccccHHHHHHCCCEEEEeCCC-cchhHHHHHHH-HH--------------
Confidence 3669999999998765442 23456677999999 9999864 321 0011110 00
Q ss_pred hhHHHHHhhhhhccccccccccccccccCCeEEEecCCC-CcHHHHHHHHHHHHHHHHHHH-cCCCCCCEEEEeCCCcch
Q 012838 224 IFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGA-GDAVALLGVFRLLQYLSQDHL-LGRKRAIKFVVDAGTGTT 301 (455)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~-~np~~~~G~~t~~~Ei~eq~~-~g~~~pD~vvvpvGtGgt 301 (455)
+.+.+...+.|.+|.+. .+|.+.+||.++++||++|+. +++ .||+||+|+|||||
T Consensus 146 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~a~Ei~~q~~~~~~-~~d~vvv~vGtGgt 202 (337)
T PRK12390 146 ----------------------EDVRAAGGKPYAIPAGASDHPLGGLGFVGFAEEVRAQEAELGF-KFDYIVVCSVTGST 202 (337)
T ss_pred ----------------------HHHHhCCCceEEeCCcCCCCCcccHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcchh
Confidence 00112234568788774 458999999999999999963 443 69999999999999
Q ss_pred HHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHH
Q 012838 302 AVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEI 381 (455)
Q Consensus 302 ~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~ 381 (455)
++|++++|++.++.+||||||++++...+...+......+++.++.+. . +....+.+.+++.++.|.|+|+|++
T Consensus 203 laGi~~~~k~~~~~~rvigV~~~~~~~~~~~~~~~~~~~~a~~~g~~~---~---~~~~~~~~~~~~~~~~~~vsd~e~~ 276 (337)
T PRK12390 203 QAGMVVGFAADGRARRVIGIDASAKPEQTRAQVLRIARNTAELVELGR---D---ITEDDVVLDERYAGPEYGLPNEGTL 276 (337)
T ss_pred HHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHHhCCCC---C---CChhhEEEecccccCCCCCCCHHHH
Confidence 999999999999999999999998765444332223333344444221 1 1122345677889999999999999
Q ss_pred HHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCCcchhhhHHHH
Q 012838 382 EACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 382 ~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
++|+++++++||++||+|||+++++++++++++ ++++++||||||||.++++++.++.
T Consensus 277 ~a~~~la~~~gi~~ep~ysg~~~aa~~~~~~~g~~~~~~~vv~~htgg~~~~~~~~~~~ 335 (337)
T PRK12390 277 EAIRLCARLEGMLTDPVYEGKSMHGMIDLVRKGEFPEGSKVLYAHLGGVPALNAYSFLF 335 (337)
T ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHhcCCCCCCCeEEEEeCCChHhhhcchhhh
Confidence 999999999999999999999999999998764 6778999999999999999876553
No 6
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=100.00 E-value=3.1e-47 Score=385.54 Aligned_cols=301 Identities=26% Similarity=0.351 Sum_probs=227.6
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha- 155 (455)
..++|||+++ ++++ +.. |.+||+||||+||+..||||+|++.+++.+|++.|+++|||+|+++|||+
T Consensus 18 ~~~~TPl~~~--~~l~-~~~---------g~~v~~K~E~l~~~~~gg~K~R~~~~~l~~a~~~G~~~vv~~~~ssGN~g~ 85 (329)
T PRK14045 18 IPWETPIQYL--PNIS-REL---------GADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVHSNHAF 85 (329)
T ss_pred CCCCCCcccc--hhhH-HHh---------CCeEEEEcccccCCCCCcchHHHHHhHHHHHHHcCCCEEEEeCccHHHHHH
Confidence 3489999999 8887 322 67999999999865458999999999999999999999999888999998
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC-chhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT-HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~-~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|++|||...+ ...|..+++++|+ |+.++.. .++..+.+. +.
T Consensus 86 alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~~Ga~v~~~~~~~~~~~~~~~~-~~---------------------- 140 (329)
T PRK14045 86 VTGLAAKKLGLDAVLVLRGKEE--LKGNYLLDKIMGIETRVYEAKDSFELMKYAE-EV---------------------- 140 (329)
T ss_pred HHHHHHHHcCCeEEEEEeCCCC--CCcCHHHHHHCCCEEEEECCCcccchHHHHH-HH----------------------
Confidence 355999999999997643 2346566799998 8877632 122111111 10
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
+.++.+.++.+|++|+|+.||.+..|+.+...||++|+......+|+||+|+|||||++|+++++
T Consensus 141 ---------------~~~l~~~~~~~~~~p~~~~n~~~~~g~~~~~~EI~~q~~~~~~~~d~vv~~vGtGGt~aGi~~~l 205 (329)
T PRK14045 141 ---------------AEELKGEGRKPYIIPPGGASPVGTLGYVRAVGEIATQVKKLGVRFDSIVVAVGSGGTLAGLSLGL 205 (329)
T ss_pred ---------------HHHHHhcCCCEEEECCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 11223334567889999999999999998888999998421136999999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
++.+++++||||++.+....+...+..+.....+..|. +... ....+.+.+.+ .|+..++|.+++|+++++
T Consensus 206 k~~~~~~kVigv~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~-----~~~~~~d~~~~-~y~~~~~e~~~~~~~la~ 276 (329)
T PRK14045 206 AILNAEWRVVGIAVGSFGEKMKEKVKNLVKKTKELLGV---KVKV-----QEPELYDYSFG-EYGKITKEVAKLIRSVGT 276 (329)
T ss_pred HHhCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHhCC---CCCc-----cceEecccccC-CCCCCCHHHHHHHHHHHH
Confidence 99999999999999774443444333333333222221 1110 01122333444 477777999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHH
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
+|||++||+|||++++++++++++. ..+++||+|||||.+++|++.+++
T Consensus 277 ~eGi~ldpvytgk~~~a~~~~~~~~-~~~~~iv~ihtGG~~g~~~~~~~~ 325 (329)
T PRK14045 277 MEGLILDPVYTGKAFYGLMDLAKKG-ELGEKILFIHTGGISGTFHYGDKM 325 (329)
T ss_pred hhCCCCccchHHHHHHHHHHHHHcC-CCCCCEEEEECCCcccccchHHHh
Confidence 9999999999999999999998764 237899999999999999988777
No 7
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=100.00 E-value=7.4e-47 Score=379.36 Aligned_cols=293 Identities=27% Similarity=0.296 Sum_probs=224.0
Q ss_pred CCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCC-cccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH----
Q 012838 81 GPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPL-VNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA---- 155 (455)
Q Consensus 81 TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~-~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha---- 155 (455)
|||+++ ++|+ +.+|. +.+||+||||+|+|+ +||||+|++.+++.+|++.|.++||++|+++|||+
T Consensus 1 TPl~~~--~~l~-~~~g~-------~~~l~~K~E~~np~gsfgs~K~R~~~~~l~~a~~~g~~~vv~~ggs~GN~g~alA 70 (307)
T cd06449 1 TPIQYL--PRLS-EHLGG-------KVEIYAKRDDCNSGLAFGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVA 70 (307)
T ss_pred Ccccch--hHHH-HhhCC-------CCcEEEecccccCCCCccchHHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHH
Confidence 899999 8887 55532 468999999998553 38899999999999999999999999988889998
Q ss_pred -HHHHhCCeEEEEecCCCcc-----ccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHH
Q 012838 156 -TAVERGLKSHLLLRGEQPQ-----ILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEAS 228 (455)
Q Consensus 156 -~Aa~~Gl~~~iv~~~~~~~-----~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~ 228 (455)
+|..+|++|+||||+..+. .+..|..+++.||+ |+.++...+.......+..+
T Consensus 71 ~~a~~~G~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~~~~~-------------------- 130 (307)
T cd06449 71 AVAAKLGLKCVLVQENWVPYSDAVYDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAA-------------------- 130 (307)
T ss_pred HHHHHcCCeEEEEecCCCCcccccccccccHHHHHHCCCEEEEECCcchhhHHHHHHHHH--------------------
Confidence 3559999999999987653 11346677899999 99998642221111111100
Q ss_pred HHhhhhhccccccccccccccccCCeEEEecCCCC-cHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHH
Q 012838 229 LTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAG-DAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~-np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
+++.+..+.+|++|+++. ||.+.+||.++++||++|+...+..||+||+|+|||||++|+++
T Consensus 131 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~~GtGgt~~G~~~ 193 (307)
T cd06449 131 -----------------EEVEAKGGKPYVIPAGGSEHPLGGLGYVGFVLEIAQQEEELGFKFDSIVVCSVTGSTHAGLSV 193 (307)
T ss_pred -----------------HHHHHcCCceEEecCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHH
Confidence 111122345688898886 99999999999999999984222369999999999999999999
Q ss_pred HHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 308 GAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 308 g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
+|++.++.++||||+++++.....+...++........+. +. ....+.+.+++.++.|.|+|+|++++|+++
T Consensus 194 ~~~~~~~~~~ii~V~~~~~~~~~~~~~~~~~~~~~~~~g~---~~-----~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l 265 (307)
T cd06449 194 GLAALGRQRRVIGIDASAKPEKTKAQVLRIAQAKLAEEGL---EV-----KEEDVVLDDDYAAPEYGIPNDETIEAIKLC 265 (307)
T ss_pred HHHhcCCCCeEEEEEecCchHHHHHHHHHHHHHHHHHcCC---CC-----CcccEEEecCcccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999987654433222221111111121 11 112455677888999999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCC
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGG 428 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG 428 (455)
++++||++||+|||++++++++++++. ++++++||+|||||
T Consensus 266 a~~~Gi~~ep~ytg~~~aa~~~~~~~~~~~~~~~vv~i~TGG 307 (307)
T cd06449 266 ARLEGIITDPVYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307 (307)
T ss_pred HHHhCCccccchHHHHHHHHHHHHhcCCCCCCCeEEEEeCCC
Confidence 999999999999999999999998764 56688999999998
No 8
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-48 Score=375.65 Aligned_cols=351 Identities=16% Similarity=0.138 Sum_probs=270.7
Q ss_pred CCCCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceE
Q 012838 33 NSPQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCF 109 (455)
Q Consensus 33 ~~~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~l 109 (455)
|-.-|..=-.|+||+||++|.| .+|.....|++|+.. ..++.+|+|+||||+.+ +||+ +.+ |++|
T Consensus 6 ~g~fG~fGG~yVpE~Lmpal~eLe~ay~~~~~D~~F~~el~~~l~~Y~GRptpLy~a--~~Lt-~~~---------gaki 73 (396)
T COG0133 6 KGYFGEFGGQYVPETLMPALEELEKAYEKAKNDPEFQAELDYLLKDYAGRPTPLYFA--ERLT-EHL---------GAKI 73 (396)
T ss_pred CCcccccCCEechHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCChhHHH--HHHH-Hhh---------CceE
Confidence 3344666678999999999988 899999999999887 78888899999999999 9999 554 6899
Q ss_pred EEEeCCCCCCCcccchhhhHHhhHHH---HHhCCCCEEEe-cCchhHHHH---HHHHhCCeEEEEecCCCccccchhhHH
Q 012838 110 YVVRDDLLHPLVNGNKARKMDALLPL---LEDHIVTDLVT-CGGCQSAHA---TAVERGLKSHLLLRGEQPQILTGYNLI 182 (455)
Q Consensus 110 ylKrEdl~~p~~GsnK~Rkl~~~l~~---A~~~G~~~VVt-~G~~~sNha---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~ 182 (455)
|+|||||||+ |+| |+++.|++ |+++|+++||+ +|++|-..| +|+++|++|+|||..++.+++..|+++
T Consensus 74 yLKREDL~Ht--GAH---KiNN~lGQ~LLAkrMGK~riIAETGAGQHGVAtAta~A~fgl~C~iYMGa~Dv~RQ~~NVfR 148 (396)
T COG0133 74 YLKREDLNHT--GAH---KINNALGQALLAKRMGKTRIIAETGAGQHGVATATAAALFGLECVIYMGAEDVERQALNVFR 148 (396)
T ss_pred EEehhhhccc--chh---hHHHHHHHHHHHHHhCCceEEeecCCCcccHHHHHHHHHhCCceEEEecchhhhhcccchhh
Confidence 9999999984 777 56677777 79999999997 888882222 578999999999999998899999999
Q ss_pred HHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC
Q 012838 183 STIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG 261 (455)
Q Consensus 183 ~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 261 (455)
|+++|| |+.|..++.+.+++++++ +++|+.++.+++|. +. +..+|+||
T Consensus 149 M~LlGA~V~pV~sGs~TLKDA~neA----------lRdWvtn~~~ThY~--------------iG--sa~GPHPy----- 197 (396)
T COG0133 149 MRLLGAEVVPVTSGSGTLKDAINEA----------LRDWVTNVEDTHYL--------------IG--SAAGPHPY----- 197 (396)
T ss_pred hhhcCceEEEeccCCchHHHHHHHH----------HHHHHhccccceEE--------------Ee--eccCCCCc-----
Confidence 999999 999998888889999876 67999999888875 44 45688887
Q ss_pred CCcHHHHHHHHHH-HHHHHHHHH--cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh-hh------HH
Q 012838 262 AGDAVALLGVFRL-LQYLSQDHL--LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI-DG------YK 331 (455)
Q Consensus 262 ~~np~~~~G~~t~-~~Ei~eq~~--~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~-~~------~~ 331 (455)
|..++.|+++ +.|..+|+. .| +.||.||+|||+|++++|+|..|. .++++++||||+.|.- .. +.
T Consensus 198 ---P~iVRdFQ~vIG~E~k~Qile~eg-rlPD~vvACVGGGSNAiG~F~~Fi-~d~~V~LiGvEaaG~Gi~t~~HaAtl~ 272 (396)
T COG0133 198 ---PTIVRDFQSVIGEEAKAQILEKEG-RLPDAVVACVGGGSNAIGIFHPFI-DDESVRLIGVEAAGKGIETGKHAATLT 272 (396)
T ss_pred ---hHHHHHHHHHHhHHHHHHHHHHhC-CCCCeEEEeccCCcchhhhccccc-CCCCceEEEeccCcCccCCCccceeec
Confidence 3789999997 899999983 56 699999999999999999999998 3578999999998732 11 00
Q ss_pred HhhHhHHHHHHHHh-----c----cccc--CCCcCccccccchheeecc-CcEEEeCCHHHHHHHHHHHHHhCCcccccc
Q 012838 332 QQEKNLISEFKRLF-----G----FLLK--KSSLNEVDGEIVHWVERCR-PRKFGNVFEGEIEACHRIAQLTGILVDPVY 399 (455)
Q Consensus 332 ~~~~~l~~~~~~~i-----g----~~~~--~~~~~~~~~~~~~l~~~~~-~~~~~v~d~ei~~a~r~La~~eGI~veP~y 399 (455)
.....+..+....+ | .-++ ++.++.++++ +.+..+.. -.-+.++|+|+++|.+.|.+.|||..-.-
T Consensus 273 ~G~~GvlhG~~tyllQd~~GQi~e~hSISAGLDYPgVGPe-ha~l~~~gRa~y~~itD~EAl~af~~L~r~EGIIPALE- 350 (396)
T COG0133 273 AGRPGVLHGMKTYLLQDEDGQILESHSISAGLDYPGVGPE-HAYLKDIGRAEYVSITDEEALEAFQLLSRLEGIIPALE- 350 (396)
T ss_pred CCCceeeecccceeeEcCCCCEeeeeeeccCCCCCCCChh-HHHHHhcCceeEEecChHHHHHHHHHHHHhcCcchhhh-
Confidence 00011111111000 0 0011 2223333322 22333332 23457899999999999999999997754
Q ss_pred hHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhHHHH
Q 012838 400 TLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLAQRY 439 (455)
Q Consensus 400 sgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~~ry 439 (455)
|+.|+|.+.+++++ .++++.||+-+|| |..|+++-.+..
T Consensus 351 SsHAlA~a~kla~~-~~~~~~ivvnlSGRGDKDv~tv~~~l 390 (396)
T COG0133 351 SSHALAYALKLAPK-LPKDEIIVVNLSGRGDKDVFTVAKLL 390 (396)
T ss_pred hHHHHHHHHHhchh-cCCCcEEEEEccCCCcccHHHHHHHh
Confidence 67999999999865 4556677788999 999999876544
No 9
>PRK04346 tryptophan synthase subunit beta; Validated
Probab=100.00 E-value=1.3e-47 Score=394.57 Aligned_cols=347 Identities=15% Similarity=0.113 Sum_probs=250.4
Q ss_pred CCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEE
Q 012838 35 PQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYV 111 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lyl 111 (455)
.-|..=-.|+||+||++|.| .+|.....|.+|+.+ ..++.+|+|++|||+++ ++|+ +.+| |.+||+
T Consensus 10 ~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~grpTPL~~~--~~Ls-~~~g--------g~~Iyl 78 (397)
T PRK04346 10 YFGEFGGRFVPETLMPALEELEEAYEKAKNDPEFQAELDYLLKNYVGRPTPLYFA--ERLS-EHLG--------GAKIYL 78 (397)
T ss_pred cccCcCCEeCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCceEh--HHHH-HHcC--------CCeEEE
Confidence 44666678999999999998 899999999999888 78888999999999999 9998 6554 689999
Q ss_pred EeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHh
Q 012838 112 VRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTI 185 (455)
Q Consensus 112 KrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~ 185 (455)
||||+| | +||||+|.+...+..|+++|+++||+ +|+ +||+ +|+++|++|+||||+.+.+++..|+.+|++
T Consensus 79 K~Edln-p-tGS~K~r~al~~~l~A~~~Gk~~vIaetga--GnhG~A~A~~aa~~Gl~c~I~mp~~d~~rq~~nv~~m~~ 154 (397)
T PRK04346 79 KREDLN-H-TGAHKINNVLGQALLAKRMGKKRIIAETGA--GQHGVATATAAALLGLECVIYMGAEDVERQALNVFRMKL 154 (397)
T ss_pred EECCCC-C-ccchHHHHHHHHHHHHHHcCCCeEEEecCc--HHHHHHHHHHHHHcCCcEEEEecCCchhhhhhHHHHHHH
Confidence 999997 6 79999999988888899999998886 665 4465 467999999999998754444568888999
Q ss_pred CCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC-CC
Q 012838 186 YGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG-AG 263 (455)
Q Consensus 186 ~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g-~~ 263 (455)
||| |+.|+.+..+.+++..++ .+.|+.+. ....|+++.. +.
T Consensus 155 lGA~Vv~v~~g~~~l~da~~ea----------~~~~~~~~---------------------------~~~~y~~gs~~gp 197 (397)
T PRK04346 155 LGAEVVPVTSGSRTLKDAVNEA----------LRDWVTNV---------------------------EDTHYLIGSVAGP 197 (397)
T ss_pred CCCEEEEECCCCCCHHHHHHHH----------HHHHHHhC---------------------------CCCeEEeCCcCCC
Confidence 999 999986422222233221 11343221 1123433211 11
Q ss_pred c--HHHH-HHHHHHHHHHHHHHH--cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhh-------HH
Q 012838 264 D--AVAL-LGVFRLLQYLSQDHL--LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDG-------YK 331 (455)
Q Consensus 264 n--p~~~-~G~~t~~~Ei~eq~~--~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~-------~~ 331 (455)
+ |..+ .|+.+++.||++|+. ++ ..||+||+|||||||++|++.+|++ ++.++|||||+.++... +.
T Consensus 198 hp~p~~v~~~q~tig~Ei~eQ~~~~~g-~~pD~vVa~VGgGg~~~Gi~~~f~~-~~~v~iigVE~~G~~~~~~~~~a~l~ 275 (397)
T PRK04346 198 HPYPTMVRDFQSVIGEEAKAQILEKEG-RLPDAVVACVGGGSNAIGIFHPFID-DESVRLIGVEAAGKGLETGKHAATLT 275 (397)
T ss_pred CCchHHHHHhcchHHHHHHHHHHHhhC-CCCCEEEEecCccHhHHHHHHHHhh-CCCCeEEEEecCCCccccccccchhh
Confidence 2 3344 588999999999983 34 4799999999999999999999975 78999999999885211 11
Q ss_pred HhhHhHHHHHHHH--------hc-cccc--CCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccch
Q 012838 332 QQEKNLISEFKRL--------FG-FLLK--KSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYT 400 (455)
Q Consensus 332 ~~~~~l~~~~~~~--------ig-~~~~--~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ys 400 (455)
........+.... +. ..++ ++.++.+++....+.+...+..+.|+|+|+++++++|+++|||++++. |
T Consensus 276 ~g~~g~~~g~~~~~~~~~~g~~~~~~sis~gL~~pgvgp~~~~l~~~~~~~~v~VtD~eal~a~~~L~~~eGIi~~~e-s 354 (397)
T PRK04346 276 KGRPGVLHGAKTYLLQDEDGQILETHSISAGLDYPGVGPEHAYLKDIGRAEYVSITDDEALEAFQLLSRLEGIIPALE-S 354 (397)
T ss_pred cCCeeeeccccceecccCCCccCCCceeeccccCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHHcCCEeccH-H
Confidence 0000000000000 00 0011 112222222233334444456789999999999999999999998875 6
Q ss_pred HHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhHH
Q 012838 401 LAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLAQ 437 (455)
Q Consensus 401 gaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~~ 437 (455)
+.++|++++++++ +.++++||+++|| |+.++....+
T Consensus 355 a~AlA~a~kla~~-l~~~~~Vvv~lsGrG~kd~~~~~~ 391 (397)
T PRK04346 355 SHALAYALKLAPT-LGKDQIIVVNLSGRGDKDVFTVAK 391 (397)
T ss_pred HHHHHHHHHhhhh-cCCCCeEEEEeCCCCccCHHHHHH
Confidence 7889999888654 5678899999999 9999888654
No 10
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=100.00 E-value=1.2e-45 Score=380.57 Aligned_cols=344 Identities=15% Similarity=0.096 Sum_probs=251.0
Q ss_pred cCCCCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCce
Q 012838 32 SNSPQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRC 108 (455)
Q Consensus 32 ~~~~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~ 108 (455)
.|..-|..=-+|+||+||++|.| ..|.....|.+|+++ ..++.+|++++|||+++ ++|+ +.+| +.+
T Consensus 11 ~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~g~pTPL~~~--~~Ls-~~~G--------g~~ 79 (402)
T PRK13028 11 ADGFFGEYGGQFVPPELKPALDELEAAYEEIKKDPDFIAELRYLLKHYVGRPTPLYHA--KRLS-EELG--------GAQ 79 (402)
T ss_pred CCCCcCCcCCEeCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeeeh--HHhH-hhcC--------CCe
Confidence 34455777789999999999998 899999999999988 77888899999999999 9998 5554 679
Q ss_pred EEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHH
Q 012838 109 FYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLI 182 (455)
Q Consensus 109 lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~ 182 (455)
||+||||+| | +||||+|.+...+..|+++|+++||+ +|+ +||+ +|+.+|++|+||||..+++.+..|+.+
T Consensus 80 IylK~Edln-p-tGS~K~r~al~~~l~A~~~G~~~vI~etgs--GnhG~A~A~aaa~~Gl~~~I~m~~~d~~~q~~nv~~ 155 (402)
T PRK13028 80 IYLKREDLN-H-TGAHKINNCLGQALLAKRMGKKRLIAETGA--GQHGVATATAAALFGLECEIYMGEVDIERQHPNVFR 155 (402)
T ss_pred EEEEECCCC-C-CcchHHHHHHHHHHHHHHcCCCeEEEecCc--HHHHHHHHHHHHHcCCCEEEEECCCcchhhHHHHHH
Confidence 999999997 6 79999999988888899999988775 665 4565 467999999999998766555568888
Q ss_pred HHhCCc-EEEeCCC--chhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEec
Q 012838 183 STIYGK-VTYVPRT--HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVN 259 (455)
Q Consensus 183 ~~~~GA-V~~v~~~--~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 259 (455)
|++||| |+.|+.+ .+++ +..+ |. ..|+. +....+|+++
T Consensus 156 mr~~GAeVi~v~~g~~~~~~--a~~~--a~--------~~~~~---------------------------~~~~~~y~~~ 196 (402)
T PRK13028 156 MKLLGAEVVPVTRGGRTLKE--AVDS--AF--------EDYLK---------------------------DPDNTHYAIG 196 (402)
T ss_pred HHHcCCEEEEEcCCCCCHHH--HHHH--HH--------HHHHH---------------------------hcCCcEEEec
Confidence 999999 9999853 2332 2211 10 11221 1112345443
Q ss_pred CC---CCcHHHH-HHHHHHHHHHHHHHH--cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccC--------
Q 012838 260 EG---AGDAVAL-LGVFRLLQYLSQDHL--LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVD-------- 325 (455)
Q Consensus 260 ~g---~~np~~~-~G~~t~~~Ei~eq~~--~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g-------- 325 (455)
.. ...|..+ .|+.+++.||.+|+. .+ ..||+||+|+|||||++|++.+|++ ++.++|||||+.+
T Consensus 197 s~~gp~p~p~~v~~~q~tig~Ei~~Q~~~~~g-~~pD~vV~~VGgGg~~~Gi~~~f~~-~~~v~iigVE~~G~~~~~~~~ 274 (402)
T PRK13028 197 SVVGPHPFPMMVRDFQSVIGEEAREQFLEMTG-RLPDAVVACVGGGSNAIGLFSAFLD-DESVRLVGVEPAGRGLDLGEH 274 (402)
T ss_pred CcCCCCCcHHHHHHHhHHHHHHHHHHHHHhhC-CCCCEEEEEcCchHHHHHHHHHHHh-CCCceEEEEecCCCCcccccc
Confidence 22 1224444 478888999999973 23 4799999999999999999999985 5889999999988
Q ss_pred ChhhHHHhhHhHHHHH--------------HHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHh
Q 012838 326 TIDGYKQQEKNLISEF--------------KRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT 391 (455)
Q Consensus 326 ~~~~~~~~~~~l~~~~--------------~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~e 391 (455)
+.. +.........+. ..++.. ++.++.+.+..+.+.+...+..+.|+|+|+++++++|+++|
T Consensus 275 aa~-l~~g~~g~~~g~~~~~l~~~~g~~~~~~sia~---gl~~~~vgp~~~~l~~~~~~~~v~VtD~eal~a~~~La~~e 350 (402)
T PRK13028 275 AAT-LTLGKPGVIHGFKSYVLQDEDGEPAPVHSIAA---GLDYPGVGPEHAYLKDIGRVEYVTATDEEALDAFFLLSRTE 350 (402)
T ss_pred ccc-ccCCCcceecccceeeccccCCCcCCccceec---cccCCCCCHHHHHHHHhcCcEEEEECHHHHHHHHHHHHHhc
Confidence 221 111100000000 001111 11122222333334444445688999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhHH
Q 012838 392 GILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLAQ 437 (455)
Q Consensus 392 GI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~~ 437 (455)
||+++|. |++++|++++++++ +.++++||+++|| |+.++....+
T Consensus 351 GIi~~~~-sa~alA~a~~~a~~-l~~~~~VVv~lsG~G~kd~~~~~~ 395 (402)
T PRK13028 351 GIIPALE-SSHAVAYAIKLAPE-LSKDETILVNLSGRGDKDIDYVAE 395 (402)
T ss_pred CCeeccH-HHHHHHHHHHhhhh-cCCCCeEEEEECCCCccCHHHHHH
Confidence 9999996 78999999988764 5678999999999 9999887654
No 11
>PLN02618 tryptophan synthase, beta chain
Probab=100.00 E-value=1e-45 Score=381.27 Aligned_cols=351 Identities=15% Similarity=0.090 Sum_probs=247.7
Q ss_pred CCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEE
Q 012838 35 PQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYV 111 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lyl 111 (455)
.-|..=-+|+||+||++|.| .+|.....|.+|+++ ...+.+|+|++|||+++ ++|+ +.+|. ....|.+||+
T Consensus 18 ~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~vGr~TPL~~~--~~Ls-~~~g~---~~~~g~~Iyl 91 (410)
T PLN02618 18 RFGKFGGKYVPETLMTALSELEAAFNALATDPEFQEELAGILKDYVGRETPLYFA--ERLT-EHYKR---ADGEGPEIYL 91 (410)
T ss_pred cccCcCCEeCCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHhcCCCCceeEh--hhHH-HHhcc---ccCCCCEEEE
Confidence 44677789999999999998 899999999999988 77778899999999999 9998 65531 0001579999
Q ss_pred EeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHh
Q 012838 112 VRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTI 185 (455)
Q Consensus 112 KrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~ 185 (455)
||||+| | +||||+|.+...+..|+++|+++||+ +|+ +||+ +|+++|++|+||||+.+.+.+..|+.+|++
T Consensus 92 K~E~ln-p-tGS~K~R~a~~~~l~A~~~g~~~vIaesga--GNhG~AlA~aaa~~Gl~~~I~m~~~~~~~~~~nv~~mr~ 167 (410)
T PLN02618 92 KREDLN-H-TGAHKINNAVAQALLAKRLGKKRIIAETGA--GQHGVATATVCARFGLECIVYMGAQDMERQALNVFRMRL 167 (410)
T ss_pred EeCCCC-C-ccchHHHHHHHHHHHHHHcCCCEEEEEcCc--HHHHHHHHHHHHHcCCcEEEEEcCCchhhhhhhHHHHHH
Confidence 999997 6 79999999888888889999998885 555 4566 477999999999998755555668888999
Q ss_pred CCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC--C
Q 012838 186 YGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG--A 262 (455)
Q Consensus 186 ~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g--~ 262 (455)
||| |+.|+.+..+..++..++ + +.|+.++ ....|+ ..+ +
T Consensus 168 lGA~Vi~v~~g~~~~~dA~~ea-~---------~~~~~~~---------------------------~~~~yi-~gs~~g 209 (410)
T PLN02618 168 LGAEVRPVHSGTATLKDATSEA-I---------RDWVTNV---------------------------ETTHYI-LGSVAG 209 (410)
T ss_pred CCCEEEEEeCCCCCHHHHHHHH-H---------HHHHhcc---------------------------CCCEEE-ecCcCC
Confidence 999 999964211112222121 1 1232111 112232 211 1
Q ss_pred CcH---HHHHHHHHHHHHHHHHH-H-cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChh-------hH
Q 012838 263 GDA---VALLGVFRLLQYLSQDH-L-LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTID-------GY 330 (455)
Q Consensus 263 ~np---~~~~G~~t~~~Ei~eq~-~-~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~-------~~ 330 (455)
.+| ...+++.+++.||.+|+ + .+ ..||+||+|||||||++|++.+|+. ++.++|||||++++.. .+
T Consensus 210 p~P~~~~v~~~q~tig~Ei~~Q~~~~~g-~~pD~VV~~VGgGg~~~Gi~~~f~~-~~~v~ligVEa~G~~~~~~~~~a~l 287 (410)
T PLN02618 210 PHPYPMMVRDFHSVIGKETRRQAMEKWG-GKPDVLVACVGGGSNAMGLFHEFID-DEDVRLIGVEAAGFGLDSGKHAATL 287 (410)
T ss_pred CCCCHHHHHHhhHHHHHHHHHHHHHHhC-CCCCEEEEEeCchHHHHHHHHHHHh-CCCceEEEEEeCCCcccccccccch
Confidence 122 23477788899999987 2 34 4799999999999999999999974 7899999999998521 01
Q ss_pred HHhhHhHHHHHH-----HHhc----cccc--CCCcCccccccchheee-ccCcEEEeCCHHHHHHHHHHHHHhCCccccc
Q 012838 331 KQQEKNLISEFK-----RLFG----FLLK--KSSLNEVDGEIVHWVER-CRPRKFGNVFEGEIEACHRIAQLTGILVDPV 398 (455)
Q Consensus 331 ~~~~~~l~~~~~-----~~ig----~~~~--~~~~~~~~~~~~~l~~~-~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ 398 (455)
.........+.. +..+ ..++ ++.++.++.. +.++++ ..+..+.|+|+|+++++++|+++|||++++.
T Consensus 288 ~~g~~gv~~g~~~~~l~~~~g~~~~~~sia~gl~~pgvgp~-~~~l~~~~~~~~v~VtD~Eal~a~~~La~~eGIi~~~s 366 (410)
T PLN02618 288 TKGEVGVLHGAMSYLLQDEDGQIIEPHSISAGLDYPGVGPE-HSFLKDTGRAEYYSVTDEEALEAFQRLSRLEGIIPALE 366 (410)
T ss_pred hcCCcceeccccccccccccCCCCCCcchhhhhcCCCCcHH-HHHHHhhcCcEEEEECHHHHHHHHHHHHHHcCceEchh
Confidence 100000000000 0000 0000 1112122222 334444 4567889999999999999999999999996
Q ss_pred chHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhHHH
Q 012838 399 YTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLAQR 438 (455)
Q Consensus 399 ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~~r 438 (455)
|++++|++++++++ +.++++||+++|| |..++.+..+.
T Consensus 367 -Sa~a~a~a~~~a~~-l~~~~~iVv~lsgrG~Kd~~~v~~~ 405 (410)
T PLN02618 367 -TSHALAYLEKLCPT-LPDGTKVVVNCSGRGDKDVNTAIKY 405 (410)
T ss_pred -HHHHHHHHHHHhHh-cCCCCEEEEEeCCCCcCCHHHHHHH
Confidence 78999999998765 6678899999999 88998886543
No 12
>PRK07591 threonine synthase; Validated
Probab=100.00 E-value=2.1e-44 Score=375.72 Aligned_cols=333 Identities=16% Similarity=0.116 Sum_probs=235.1
Q ss_pred CCceeEEeeeHHHHHHHhhhhhhhccCCCcccchhhcccc-------ccccCCCCCcccccCCCCCCcCCCcccccCCCc
Q 012838 35 PQGICNVRMSGEELLSRLLDRKWALTSPDSKIHQIKLFTT-------TEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDR 107 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~ 107 (455)
-.|++++.|+.+.+........|. .....+||+..++| ..-+|+|||+++ ++|+ +.+| ..
T Consensus 39 cg~~l~~~y~~~~~~~~~~~~~~~--~~~~~~wry~~~lp~~~~~~v~l~eG~TPLv~~--~~l~-~~lG--------~~ 105 (421)
T PRK07591 39 CFGPLEVAYDYDAIRKRVSRESIE--AGPKSIWRYRDLLPVPADNPVDLGPGFTPLVKA--DRLA-RELG--------LK 105 (421)
T ss_pred CCCeEEEEechhhhccccChhhhh--ccccchhcchhhCccccCCCCcCCCCCCcceEh--HHHH-HHhC--------CC
Confidence 358999999977554221000010 00122333322111 225699999999 8887 4443 25
Q ss_pred eEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHH
Q 012838 108 CFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLIST 184 (455)
Q Consensus 108 ~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~ 184 (455)
+||+|+|++| | +||||||++.+++..|++.|.++||+ +||.+...| +|+++|++|+||||...+. .++.+++
T Consensus 106 ~l~~K~E~~n-P-tGSfKdRga~~~v~~A~~~g~~~vv~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~---~k~~~~~ 180 (421)
T PRK07591 106 NLYIKDDSVN-P-THSFKDRVVSVALTAARELGFTTVACASTGNLANSVAAHAARAGLDSCVFIPADLEA---GKIVGTL 180 (421)
T ss_pred cEEEEeCCCC-C-ccChHHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCH---HHHHHHH
Confidence 8999999997 8 89999999999999999999999985 344332222 5779999999999987543 4667789
Q ss_pred hCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCC
Q 012838 185 IYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAG 263 (455)
Q Consensus 185 ~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~ 263 (455)
.||| |+.|++. |++..+. ++++ .+..+..|+++ ...
T Consensus 181 ~~GA~Vi~v~g~-~d~a~~~----a~~~-------------------------------------~~~~~~~~~~n-~~~ 217 (421)
T PRK07591 181 VYGPTLVAVDGN-YDDVNRL----CSEL-------------------------------------ANEHEGWGFVN-INL 217 (421)
T ss_pred HcCCEEEEECCC-HHHHHHH----HHHH-------------------------------------HHhcCCEEEec-CCC
Confidence 9999 9999874 6542222 1111 11122344443 235
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc-------CCCceEEEEeccCChhhHHHhhHh
Q 012838 264 DAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL-------GLPWEVTAIALVDTIDGYKQQEKN 336 (455)
Q Consensus 264 np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~-------g~~~~vigVe~~g~~~~~~~~~~~ 336 (455)
||..++|++++++||++|+ ++..||+||+|+|+||+++|++++|+++ ++.+||+|||++++...+......
T Consensus 218 ~p~~ieG~~Tia~Ei~eQl--~~~~pD~iv~pvG~Gg~~~Gv~~g~kel~~~g~i~~~~prii~Vq~~g~~~~~~~~~~g 295 (421)
T PRK07591 218 RPYYAEGSKTLGYEVAEQL--GWRLPDQVVAPLASGSLLTKIDKGFQELIKVGLVEDKPVRVFGAQAEGCSPIAQAFKEG 295 (421)
T ss_pred CcccccchHHHHHHHHHHc--CCCCCCEEEEeCCchHHHHHHHHHHHHHHhcCCccCCCceEEEEecCCCCHHHHHHHcC
Confidence 6777899999999999996 4445999999999999999999999986 578999999999865433221100
Q ss_pred ---H----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHH
Q 012838 337 ---L----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATL 409 (455)
Q Consensus 337 ---l----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~ 409 (455)
. ...+++.+. ++... .....+..++++.+..+.|+|+|+++++++|++++||++||+ +|+++|++++
T Consensus 296 ~~~~~~~~~~tia~~l~---~~~p~--~~~~~~~~i~~~~g~~v~Vsd~ei~~a~~~la~~eGi~~eps-saaalAal~~ 369 (421)
T PRK07591 296 RDVVKPVKPNTIAKSLA---IGNPA--DGPYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETA-GGVTVAVLKK 369 (421)
T ss_pred CCcccCCCCCchhhhee---cCCCC--CcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCCeeecch-HHHHHHHHHH
Confidence 0 112222221 11111 112345667888999999999999999999999999999995 8999999999
Q ss_pred Hhhhc-CCCCCeEEEEecC-CCcchhhhH
Q 012838 410 LSDEK-LKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 410 l~~~~-~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
+.+++ +.++++||+|+|| |+.+...+.
T Consensus 370 l~~~g~i~~~~~VV~i~tG~G~kd~~~~~ 398 (421)
T PRK07591 370 LVEAGKIDPDEETVVYITGNGLKTLEAVA 398 (421)
T ss_pred HHHhCCCCCCCeEEEEeCCCccCCHHHHH
Confidence 98764 6678999999999 999976543
No 13
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=100.00 E-value=3.2e-43 Score=381.03 Aligned_cols=359 Identities=14% Similarity=0.083 Sum_probs=249.1
Q ss_pred CCCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCC-CceE
Q 012838 34 SPQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDE-DRCF 109 (455)
Q Consensus 34 ~~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~-g~~l 109 (455)
..-|..=-.|+||+||++|.| ..|.....|.+|+++ ..++.+|+|++|||+++ ++|+ +.+- +..+ |.+|
T Consensus 277 ~~~g~~gg~~~pe~l~~~~~~l~~~~~~~~~~~~f~~e~~~~~~~~iGrpTPL~~~--~~Ls-~~l~----~~~G~g~~I 349 (695)
T PRK13802 277 PYWGQFGGRYVPEALITALDELERVYTQAKADPEFHKELATLNQRYVGRPSPLTEA--PRFA-ERVK----EKTGLDARV 349 (695)
T ss_pred CCcCCcCCEeCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCCceeEc--hhhh-hhhH----hhcCCCceE
Confidence 345777889999999999998 899999999999988 78888999999999999 8887 3210 1121 4799
Q ss_pred EEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEE-ecCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHH
Q 012838 110 YVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLV-TCGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLIS 183 (455)
Q Consensus 110 ylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VV-t~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~ 183 (455)
|+||||+| | +||||+|.+.+.+..|+++|++++| ++|+ +||+ +|+++|++|+||||..++..+..|+.+|
T Consensus 350 ylK~E~lN-p-TGS~KdR~Al~~i~~A~~~G~~~~Ivetss--GNhG~AlA~aaA~~Gl~c~Ivmp~~~~~~~~~nv~~m 425 (695)
T PRK13802 350 FLKREDLN-H-TGAHKINNALGQALLVKRMGKTRVIAETGA--GQHGVATATVCAMLGLKCRIYMGQIDARRQALNVARM 425 (695)
T ss_pred EEEEccCC-C-cCCcHHHHHHHHHHHHHHcCCCCEEEEECc--HHHHHHHHHHHHHcCCCEEEEEeCCcccccHHHHHHH
Confidence 99999997 7 7999999999999999999997555 5665 4455 5779999999999987655556688889
Q ss_pred HhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC-
Q 012838 184 TIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG- 261 (455)
Q Consensus 184 ~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g- 261 (455)
++||| |+.|+.+.....++..++ ++ .|+. +....+|+++..
T Consensus 426 r~lGAeVi~v~~g~~~l~~Ai~ea-~~---------~~~~---------------------------~~~~~~y~i~~~~ 468 (695)
T PRK13802 426 RMLGAEVVEVTLGDRILKDAINEA-LR---------DWVT---------------------------NVKDTHYLLGTVA 468 (695)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHH-HH---------HHHH---------------------------hcCCceEeecccC
Confidence 99999 999985432211221111 11 1221 111133544433
Q ss_pred CCcH--H-HHHHHHHHHHHHHHHHHc--CCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHh
Q 012838 262 AGDA--V-ALLGVFRLLQYLSQDHLL--GRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKN 336 (455)
Q Consensus 262 ~~np--~-~~~G~~t~~~Ei~eq~~~--g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~ 336 (455)
+.+| . ...|+.++|.||++|+.. |.+.||+||+|||||||++|++.+|++ .+.++|||||+.+...........
T Consensus 469 g~~P~p~~v~agq~tiG~EI~eQ~~~~~g~~~pD~VVa~VGgGg~~~Gi~~~f~~-~~~vkligVE~~g~g~~~g~h~~~ 547 (695)
T PRK13802 469 GPHPFPAMVRDFQKIIGEEAKQQLQDWYGIDHPDAICACVGGGSNAIGVMNAFLD-DERVNLYGYEAGGNGPESGKHAIR 547 (695)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEEcCCchHHHHHHHHHHHh-CCCceEEEEEecCCCccccchhhh
Confidence 1233 2 348889999999999831 212699999999999999999999975 689999999999853221111111
Q ss_pred HHH---------HHHHHh-cc--------ccc--CCCcCccccccchheeeccCcE--EEeCCHHHHHHHHHHHHHhCCc
Q 012838 337 LIS---------EFKRLF-GF--------LLK--KSSLNEVDGEIVHWVERCRPRK--FGNVFEGEIEACHRIAQLTGIL 394 (455)
Q Consensus 337 l~~---------~~~~~i-g~--------~~~--~~~~~~~~~~~~~l~~~~~~~~--~~v~d~ei~~a~r~La~~eGI~ 394 (455)
+.. +....+ .. .++ ++.++.+++ .+.+.. ..+.. +.|+|+|+++++++|+++|||+
T Consensus 548 ~~~g~g~~g~~~g~~~~~~~~~~g~~~~~~sis~gLdy~gvgp-~~~~l~-~~~rv~~~~vtD~eal~a~~~La~~EGIi 625 (695)
T PRK13802 548 FAPGTGELGMFQGAKSYLLENDEGQTLDTYSISAGLDYASVGP-EHAWLK-DIGRVNYSWATDEEAMNAFKDLCETEGII 625 (695)
T ss_pred hhhccCCccccccceeecccCCCCCccCccccccccCCCCCCc-hhHHHH-hcCCeEEEEECHHHHHHHHHHHHHHcCcc
Confidence 111 100000 00 000 111111111 111111 13334 7899999999999999999999
Q ss_pred ccccchHHHHHHHHHHhhhcCCC----CCeEEEEecC-CCcchhhhHHHHHHHhccccCC
Q 012838 395 VDPVYTLAAWEMATLLSDEKLKQ----DADVVMLHTG-GTLGMFGLAQRYKSSFHSLKDG 449 (455)
Q Consensus 395 veP~ysgaalAgl~~l~~~~~~~----g~~VV~I~TG-G~~~~~~~~~ry~~~~~~~~~~ 449 (455)
++|. |++++|++++++++ +.+ +++||+++|| |..++.+.. ..++.|.|.
T Consensus 626 pa~e-S~hAva~a~~~a~~-~~~~~~~~~~Vv~~lsg~GdKdl~~~~----~~~~~~~~~ 679 (695)
T PRK13802 626 PAIE-SSHAVAGAYKAAAD-LKAKGYEHPVMIVNISGRGDKDMNTAG----KWFGYLTDE 679 (695)
T ss_pred ccch-HHHHHHHHHHHHHh-cccccCCCCEEEEEECCCCcCCHHHHH----HHhCCCChh
Confidence 9996 78999999999764 222 5589999999 999999854 344555443
No 14
>PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional
Probab=100.00 E-value=3.8e-43 Score=380.40 Aligned_cols=348 Identities=14% Similarity=0.089 Sum_probs=250.7
Q ss_pred cCCCCceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCce
Q 012838 32 SNSPQGICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRC 108 (455)
Q Consensus 32 ~~~~~~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~ 108 (455)
.|..-|..=-.|+||+||++|.| ..|.....|.+|+++ ..++++|++++|||+++ ++|+ +.+ |.+
T Consensus 220 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grpTPL~~~--~~Ls-~~~---------G~~ 287 (610)
T PRK13803 220 PAGRYGTFGGAYVPETLMANLQELQESYTKIIKSNEFQKTFKRLLQNYAGRPTPLTEA--KRLS-DIY---------GAR 287 (610)
T ss_pred CCCcccCcCCEeCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCCcceeH--HHHH-Hhh---------CCE
Confidence 34556778889999999999998 899999999999888 77888999999999999 9998 443 679
Q ss_pred EEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHH
Q 012838 109 FYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLI 182 (455)
Q Consensus 109 lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~ 182 (455)
||+||||+| | +||||+|.+...+..|+++|+++||+ +|+ +||+ +|+++|++|+||||..+++.+..|+.+
T Consensus 288 IylK~E~ln-p-tGS~K~r~al~~~~~a~~~g~~~vi~e~gs--GnhG~A~A~~aa~~Gl~~~I~m~~~~~~~~~~nv~~ 363 (610)
T PRK13803 288 IYLKREDLN-H-TGSHKINNALGQALLAKRMGKTRIIAETGA--GQHGVATATACALFGLKCTIFMGEEDIKRQALNVER 363 (610)
T ss_pred EEEEeCCCC-C-cccHHHHHHHHHHHHHHHcCCCEEEEecCh--HHHHHHHHHHHHHcCCcEEEEEeCCcccchhhHHHH
Confidence 999999997 6 79999999888888899999988885 655 5566 467999999999998765555568888
Q ss_pred HHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC
Q 012838 183 STIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG 261 (455)
Q Consensus 183 ~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 261 (455)
|+.||| |+.|+.+..+.+++..++ + ..|+. +.....|+++..
T Consensus 364 m~~~GA~Vi~v~~~~~~~~~a~~~a-~---------~~~~~---------------------------~~~~~~y~~~~~ 406 (610)
T PRK13803 364 MKLLGANVIPVLSGSKTLKDAVNEA-I---------RDWVA---------------------------SVPDTHYLIGSA 406 (610)
T ss_pred HHHCCCEEEEECCCCCCHHHHHHHH-H---------HHHHH---------------------------hCCCcEEEeCCc
Confidence 999999 999986432222222221 0 01211 111223443321
Q ss_pred -CCc--HHHH-HHHHHHHHHHHHHHH--cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhh------
Q 012838 262 -AGD--AVAL-LGVFRLLQYLSQDHL--LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDG------ 329 (455)
Q Consensus 262 -~~n--p~~~-~G~~t~~~Ei~eq~~--~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~------ 329 (455)
+.+ |..+ .|+.+++.||++|+. .+ ..||+||+|+|||||++|++.+|+ .+++++|||||+.++...
T Consensus 407 ~g~~p~p~~v~~~~~tig~Ei~~Q~~~~~g-~~pD~vV~~vGgGg~~~Gi~~~f~-~~~~v~iigVE~~g~~~~~~~~~a 484 (610)
T PRK13803 407 VGPHPYPEMVAYFQSVIGEEAKEQLKEQTG-KLPDAIIACVGGGSNAIGIFYHFL-DDPSVKLIGVEAGGKGVNTGEHAA 484 (610)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHhhC-CCCCEEEEEeCcCHhHHHHHHHHh-hCCCceEEEEecCCCCcccccccc
Confidence 112 4444 478889999999983 24 479999999999999999999997 478999999999885211
Q ss_pred -HHHhhHhHHHHHHHH--------h-ccccc--CCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccc
Q 012838 330 -YKQQEKNLISEFKRL--------F-GFLLK--KSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDP 397 (455)
Q Consensus 330 -~~~~~~~l~~~~~~~--------i-g~~~~--~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP 397 (455)
+.........+.... + ...++ ++..+.++...+.+.+....+.+.|+|+|+++++++|++.|||+++|
T Consensus 485 ~l~~g~~g~~~g~~~~~~~~~~g~~~~~~sia~gl~~~gvg~~~~~~~~~~~~~~v~Vtd~ea~~a~~~La~~eGi~~~~ 564 (610)
T PRK13803 485 TIKKGRKGVLHGSMTYLMQDENGQILEPHSISAGLDYPGIGPMHANLFETGRAIYTSVTDEEALDAFKLLAKLEGIIPAL 564 (610)
T ss_pred hhhcCCeeeeccceeeeecccCCcccCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHHcCCccCc
Confidence 111000000110000 0 00001 11122223333344444455678999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhH
Q 012838 398 VYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 398 ~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
+ ||+++|++++++. .+.++++||+++|| |+.++....
T Consensus 565 s-sa~alA~~~~~~~-~~~~~~~Vvv~lsG~G~kd~~~~~ 602 (610)
T PRK13803 565 E-SSHALAYLKEGRK-KFKKKDIVIVNLSGRGDKDIPTLK 602 (610)
T ss_pred H-HHHHHHHHHHhch-hcCCCCeEEEEeCCCCcCCHHHHH
Confidence 6 7899999998754 35668899999999 999988764
No 15
>TIGR00263 trpB tryptophan synthase, beta subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. the beta chain contains the functional domain for or the synthesis of tryptophan from indole and serine. The enzyme requires pyridoxal-phosphate as a cofactor. The pyridoxal-P attachment site is contained within the conserved region [LIVM]-x-H-x-G-[STA]-H-K-x-N] [K is the pyridoxal-P attachment site] which is present between residues 90-100 of the model.
Probab=100.00 E-value=5.6e-43 Score=361.11 Aligned_cols=337 Identities=15% Similarity=0.091 Sum_probs=238.1
Q ss_pred eeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeC
Q 012838 38 ICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRD 114 (455)
Q Consensus 38 ~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrE 114 (455)
..=-+|.||++++.|.+ +.|.....|.+||++ ...+..|++++|||+++ ++|+ +.+| +.+||+|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~TPL~~~--~~l~-~~~g--------~~~iy~K~E 73 (385)
T TIGR00263 5 DFGGQYVPETLMPALEELEAAFEDAKADPAFWAELNELLRNYAGRPTPLTFA--PNLT-EALG--------GAKIYLKRE 73 (385)
T ss_pred CcCCEeCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCCCceeh--HHHH-HHhC--------CCeEEEEeC
Confidence 33458999999999987 788888888899988 66667788999999999 8888 5443 479999999
Q ss_pred CCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc
Q 012838 115 DLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK 188 (455)
Q Consensus 115 dl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA 188 (455)
++| | +||||+|.+...+..+++.|.++||+ +|+ +||+ +|+.+|++|+||||....+....|+.+|+.|||
T Consensus 74 ~~n-p-tGS~K~R~a~~~~~~a~~~g~~~vi~e~ss--GN~G~alA~~a~~~Gl~~~Iv~p~~~~~~~~~~~~~~~~~GA 149 (385)
T TIGR00263 74 DLN-H-TGAHKINNALGQALLAKRMGKKRIIAETGA--GQHGVATATAAALLGLDCEVYMGAEDVERQKPNVFRMELLGA 149 (385)
T ss_pred CCC-C-CccchHHHHHHHHHHHHHcCCCEEEEEcCc--HHHHHHHHHHHHHcCCCEEEEecCCcccccchHHHHHHHcCC
Confidence 997 8 79999999988888899999887774 544 4455 467999999999997533222246677999999
Q ss_pred -EEEeCCC--chhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCC-eEEEecCCCC-
Q 012838 189 -VTYVPRT--HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRK-KVLIVNEGAG- 263 (455)
Q Consensus 189 -V~~v~~~--~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~y~ip~g~~- 263 (455)
|+.|+.. .+++ +.+..+++ | .+..+ .+|+++ +..
T Consensus 150 ~Vv~v~~~~~~~~~---a~~~~~~~---------~----------------------------~~~~~~~~y~~~-~~~~ 188 (385)
T TIGR00263 150 KVIPVTSGSGTLKD---AVNEALRD---------W----------------------------VTSVDDTHYVLG-SAVG 188 (385)
T ss_pred EEEEECCCCCCHHH---HHHHHHHH---------H----------------------------HHhcCCceEEeC-CcCC
Confidence 9998753 2322 21111111 0 11111 234332 222
Q ss_pred -c--HHH-HHHHHHHHHHHHHHHHc-CCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhHH
Q 012838 264 -D--AVA-LLGVFRLLQYLSQDHLL-GRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLI 338 (455)
Q Consensus 264 -n--p~~-~~G~~t~~~Ei~eq~~~-g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~ 338 (455)
+ |.. ..|+.++++||++|+.. .+..||+||+|+|||||++|++.+|.+ .+.++|||||++++..........+.
T Consensus 189 ~~p~~~~~~~~~~t~g~Ei~~Ql~~~~~~~pD~vv~~vG~Gg~~~Gv~~~~~~-~~~~~iigVe~~gs~~~~~~~~~~~~ 267 (385)
T TIGR00263 189 PHPFPTMVRDFQSVIGEEAKEQILEQEGRLPDAVIACVGGGSNAIGIFYAFID-DPSVQLIGVEAGGLGIDTDKHAATLA 267 (385)
T ss_pred CCCchHHHHHHhhHHHHHHHHHHHhhhCCCCCEEEEEeCchHHHHHHHHHHhh-CCCCeEEEEEeCCCcccchhhhhhhh
Confidence 2 233 47888999999999731 123689999999999999999999964 68999999999986311000000010
Q ss_pred HHH---------------------HHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccc
Q 012838 339 SEF---------------------KRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDP 397 (455)
Q Consensus 339 ~~~---------------------~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP 397 (455)
.+. ..++.. +...+.+.+..+.+.+...++.+.|+|+|+++++++|+++|||+++|
T Consensus 268 ~g~~~~~~~~~~~~~~~~~~~~~~~~tia~---gl~~~~~~p~~~~~~~~~~~~~v~Vsd~e~~~a~~~la~~egi~~~~ 344 (385)
T TIGR00263 268 KGSPGVLHGMKTYLLQDEDGQILEAHSVSA---GLDYPGVGPEHAYLHETGRATYEAITDDEALEAFKLLSRNEGIIPAL 344 (385)
T ss_pred cCCeeEecCcccccccCCCCcccccceeec---cccCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCeech
Confidence 000 000110 11111122234445555566789999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhH
Q 012838 398 VYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 398 ~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
+ +|++++++++++++ +.++++||+|+|| |+.++..+.
T Consensus 345 s-saaalaa~~~~~~~-l~~~~~Vv~i~~g~G~~d~~~~~ 382 (385)
T TIGR00263 345 E-SSHALAHLEKIAPT-LPKDQIVVVNLSGRGDKDIFTIA 382 (385)
T ss_pred H-HHHHHHHHHHHHHh-CCCCCeEEEEeCCCCcCCHHHHH
Confidence 6 78999999988764 5578999999999 999988754
No 16
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=100.00 E-value=1.8e-42 Score=348.91 Aligned_cols=286 Identities=16% Similarity=0.123 Sum_probs=211.3
Q ss_pred CCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC---CCEEEecCchhHHHH-
Q 012838 80 GGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI---VTDLVTCGGCQSAHA- 155 (455)
Q Consensus 80 ~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G---~~~VVt~G~~~sNha- 155 (455)
+|||+++ ++++ +.+ |.+||+|+|++| | +||||+|++.+++.+|+++| .++||++++ +||+
T Consensus 1 ~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~l~~a~~~g~~~~~~vv~aSs--GN~g~ 64 (316)
T cd06448 1 KTPLIES--TALS-KTA---------GCNVFLKLENLQ-P-SGSFKIRGIGHLCQKSAKQGLNECVHVVCSSG--GNAGL 64 (316)
T ss_pred CCCcccc--chhh-Hhh---------CCeEEEEeccCC-C-cCChHHHHHHHHHHHHHHhhcccCCeEEEeCC--cHHHH
Confidence 6999999 8887 333 579999999996 8 79999999999999999998 788997543 4555
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|+.+|++|+||||...+.. +..+|+.||| |+.+++..++...+ .+++
T Consensus 65 alA~~a~~~G~~~~iv~p~~~~~~---k~~~l~~~GA~v~~~~~~~~~~~~~----~~~~-------------------- 117 (316)
T cd06448 65 AAAYAARKLGVPCTIVVPESTKPR---VVEKLRDEGATVVVHGKVWWEADNY----LREE-------------------- 117 (316)
T ss_pred HHHHHHHHcCCCEEEEECCCCCHH---HHHHHHHcCCEEEEECCchHHHHHH----HHHH--------------------
Confidence 46699999999999986532 5567899999 99988642332111 1111
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCCEEEEeCCCcchHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGR-KRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~-~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
+.+..++.|+++ ++.||...+||+++++||++|+ ++ ..||+||+|+|||||++|++++|
T Consensus 118 -----------------l~~~~~~~~~~~-~~~n~~~~~g~~t~~~Ei~~q~--~~~~~~D~vv~~vG~Gg~~~Gv~~~~ 177 (316)
T cd06448 118 -----------------LAENDPGPVYVH-PFDDPLIWEGHSSMVDEIAQQL--QSQEKVDAIVCSVGGGGLLNGIVQGL 177 (316)
T ss_pred -----------------HHhccCCcEEeC-CCCCchhhccccHHHHHHHHHc--cccCCCCEEEEEeCchHHHHHHHHHH
Confidence 122222333333 3478999999999999999997 32 15999999999999999999999
Q ss_pred HhcC-CCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHH
Q 012838 310 ICLG-LPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIE 382 (455)
Q Consensus 310 ~~~g-~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~ 382 (455)
++++ ++++|||||++++.......... . ...+++.++. +.++...+.+.++..++.+.|+|+|+++
T Consensus 178 k~~~~~~~~ii~Vep~g~~~~~~~~~~g~~~~~~~~~t~a~glg~-------~~~~~~~~~~~~~~~~~~v~Vsd~e~~~ 250 (316)
T cd06448 178 ERNGWGDIPVVAVETEGAHSLNASLKAGKLVTLPKITSVATSLGA-------KTVSSQALEYAQEHNIKSEVVSDRDAVQ 250 (316)
T ss_pred HhcCCCCCEEEEEeeCCChHHHHHHHcCCcEecCCCCchhhccCC-------CCcCHHHHHHHHhcCCeEEEECHHHHHH
Confidence 9997 89999999999976533221000 0 0112222221 1122234555666678899999999999
Q ss_pred HHHHHHHHhCCcccccchHHHHHHHHHHh-----hh-cCCCCCeEEEEecCCCc-chhhhH
Q 012838 383 ACHRIAQLTGILVDPVYTLAAWEMATLLS-----DE-KLKQDADVVMLHTGGTL-GMFGLA 436 (455)
Q Consensus 383 a~r~La~~eGI~veP~ysgaalAgl~~l~-----~~-~~~~g~~VV~I~TGG~~-~~~~~~ 436 (455)
++++|++++||++||+ +|+++|++++.. ++ .+.++++||+|+||||. +...+.
T Consensus 251 a~~~l~~~~gi~~~~s-saa~laa~~~~~~~~~~~~~~~~~~~~Vv~iltg~n~~~~~~~~ 310 (316)
T cd06448 251 ACLRFADDERILVEPA-CGAALAVVYSGKILDLQLEVLLTPLDNVVVVVCGGSNITLEQLK 310 (316)
T ss_pred HHHHHHHHcCceechh-HHHHHHHHHhCcchhhhcccccCCCCeEEEEECCCCCCCHHHHH
Confidence 9999999999999996 789999998532 11 25678999999999998 877654
No 17
>PRK08197 threonine synthase; Validated
Probab=100.00 E-value=2.5e-42 Score=357.73 Aligned_cols=326 Identities=17% Similarity=0.126 Sum_probs=229.1
Q ss_pred CceeEEeeeHHHHHHHhhhhhhhccCCCcccchhhcccc--------ccccCCCCCcccccCCCCCCcCCCcccccCCCc
Q 012838 36 QGICNVRMSGEELLSRLLDRKWALTSPDSKIHQIKLFTT--------TEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDR 107 (455)
Q Consensus 36 ~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~ 107 (455)
.|++++.|+.+.+...+....+. .....+||+..++| ..-+|+|||+++ ++|+ +.+| ..
T Consensus 29 g~~l~~~~d~~~~~~~~~~~~~~--~~~~~~~ry~~~lp~~~~~~~vslgeG~TPL~~~--~~l~-~~~G--------~~ 95 (394)
T PRK08197 29 GKPLLVRYDLEAVKQAVTREALA--GRPANLWRYHELLPVRDPEHIVSLGEGMTPLLPL--PRLG-KALG--------IG 95 (394)
T ss_pred CCeeEEEechhhhhhccchhhhc--cCCcchhcchhhCCCCCCCCCCccCcCCCCceEh--HHHH-HHhC--------CC
Confidence 58999999977554332111110 11123333322221 124699999999 8887 4442 25
Q ss_pred eEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHH
Q 012838 108 CFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLIST 184 (455)
Q Consensus 108 ~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~ 184 (455)
+||+|+|++| | +||||||++.+++.+|++.|.++||+ +||.+.+.| +|+.+|++|+||||...+. .+..+++
T Consensus 96 ~l~~K~E~~n-P-tGSfKdRga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~---~k~~~~~ 170 (394)
T PRK08197 96 RLWVKDEGLN-P-TGSFKARGLAVGVSRAKELGVKHLAMPTNGNAGAAWAAYAARAGIRATIFMPADAPE---ITRLECA 170 (394)
T ss_pred cEEEEeCCCC-C-CcCcHHhHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCH---HHHHHHH
Confidence 8999999996 8 89999999999999999999999994 565443333 6779999999999987653 3567789
Q ss_pred hCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCC
Q 012838 185 IYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAG 263 (455)
Q Consensus 185 ~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~ 263 (455)
.||| |+.|++. +++..+. |+++ .+. ...|+ ..+..
T Consensus 171 ~~GA~Vi~v~~~-~~~~~~~----a~~~-------------------------------------~~~-~g~~~-~~~~~ 206 (394)
T PRK08197 171 LAGAELYLVDGL-ISDAGKI----VAEA-------------------------------------VAE-YGWFD-VSTLK 206 (394)
T ss_pred HcCCEEEEECCC-HHHHHHH----HHHH-------------------------------------HHh-cCccc-ccCCC
Confidence 9999 9999864 5432221 1111 111 12333 34456
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc-------CCCceEEEEeccCChhhHHHhhHh
Q 012838 264 DAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL-------GLPWEVTAIALVDTIDGYKQQEKN 336 (455)
Q Consensus 264 np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~-------g~~~~vigVe~~g~~~~~~~~~~~ 336 (455)
||..++|++|+++||++|+ ++..||+||+|+|+|++++|++++|+++ ++.++|+|||++++..........
T Consensus 207 np~~ieG~~t~a~Ei~eQl--~~~~pD~vvvpvG~Gg~~~Gi~~~~k~~~~~g~~~~~~p~ii~Vq~~g~~~l~~~~~~g 284 (394)
T PRK08197 207 EPYRIEGKKTMGLELAEQL--GWRLPDVILYPTGGGVGLIGIWKAFDELEALGWIGGKRPRLVAVQAEGCAPIVKAWEEG 284 (394)
T ss_pred CccchhcHHHHHHHHHHHc--CCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCcCCCCCeEEEEEeCCCCHHHHHHHcC
Confidence 8888899999999999996 4446999999999999999999999986 478999999999875543221100
Q ss_pred ---H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHH
Q 012838 337 ---L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMAT 408 (455)
Q Consensus 337 ---l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~ 408 (455)
. ...+++.+. ++.... ....+..++++.+..+.|+|+|+++++++|++++||++||+ +|+++|+++
T Consensus 285 ~~~~~~~~~~~tia~gl~---~~~~~~--~~~~~~~~~~~~g~~v~V~d~e~~~a~~~la~~eGi~veps-saaala~~~ 358 (394)
T PRK08197 285 KEESEFWEDAHTVAFGIR---VPKALG--DFLVLDAVRETGGCAIAVSDDAILAAQRELAREEGLFACPE-GAATFAAAR 358 (394)
T ss_pred CCccccCCCCCceehhhh---CCCCCC--HHHHHHHHHHhCCEEEEeCHHHHHHHHHHHHhcCCceECch-HHHHHHHHH
Confidence 0 011111111 111100 11234456678888999999999999999999999999997 899999999
Q ss_pred HHhhhc-CCCCCeEEEEecCCCcc
Q 012838 409 LLSDEK-LKQDADVVMLHTGGTLG 431 (455)
Q Consensus 409 ~l~~~~-~~~g~~VV~I~TGG~~~ 431 (455)
++.++. +.++++||+|+||++.-
T Consensus 359 ~l~~~~~~~~~~~Vv~v~tG~g~k 382 (394)
T PRK08197 359 QLRESGWLKGDERVVLFNTGSGLK 382 (394)
T ss_pred HHHHcCCcCCCCcEEEEeCCCCcC
Confidence 987764 56688999999996643
No 18
>PRK06381 threonine synthase; Validated
Probab=100.00 E-value=5e-42 Score=346.08 Aligned_cols=288 Identities=16% Similarity=0.142 Sum_probs=209.9
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha- 155 (455)
|+|||+++ ++|+ +.+| ..+||+|+|++| | +||||+|++.+++.+|+++|.++||+ +||.+...+
T Consensus 14 g~TPL~~~--~~l~-~~~G--------~~~i~~K~E~~n-p-tGS~K~R~a~~~l~~a~~~g~~~lv~aSsGN~g~alA~ 80 (319)
T PRK06381 14 GGTPLLRA--RKLE-EELG--------LRKIYLKFEGAN-P-TGTQKDRIAEAHVRRAMRLGYSGITVGTCGNYGASIAY 80 (319)
T ss_pred CCCceeEh--HhhH-HhcC--------CceEEEEecCCC-C-ccCcHHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHH
Confidence 89999999 8888 5443 268999999996 8 89999999999999999999999994 444332222
Q ss_pred HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhh
Q 012838 156 TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKS 234 (455)
Q Consensus 156 ~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~ 234 (455)
+|+.+|++|+||||...+. .++.+++.||| |+.+++. |++..+. |+++
T Consensus 81 ~aa~~G~~~~ivvp~~~~~---~~~~~l~~~GA~V~~~~~~-~~~~~~~----a~~~----------------------- 129 (319)
T PRK06381 81 FARLYGLKAVIFIPRSYSN---SRVKEMEKYGAEIIYVDGK-YEEAVER----SRKF----------------------- 129 (319)
T ss_pred HHHHcCCcEEEEECCCCCH---HHHHHHHHcCCEEEEcCCC-HHHHHHH----HHHH-----------------------
Confidence 5679999999999987643 35567899999 9999874 5432211 1111
Q ss_pred hccccccccccccccccCCeEEEecCCCCcH-HHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc-
Q 012838 235 RASCLGQMDAHKGIDNCRKKVLIVNEGAGDA-VALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL- 312 (455)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np-~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~- 312 (455)
.+. +.+|+++.++.|| ..++||.++++||++|+ + ..||+||+|+|||||++|++++|+++
T Consensus 130 --------------~~~-~~~~~~~~~~~n~~~~~~G~~t~a~Ei~~ql--~-~~~D~vv~~vGtGgt~~Gl~~~~~~~~ 191 (319)
T PRK06381 130 --------------AKE-NGIYDANPGSVNSVVDIEAYSAIAYEIYEAL--G-DVPDAVAVPVGNGTTLAGIYHGFRRLY 191 (319)
T ss_pred --------------HHH-cCcEecCCCCCCcchHhhhHHHHHHHHHHHh--C-CCCCEEEEcCCccHHHHHHHHHHHHHH
Confidence 111 2456666655465 78999999999999997 3 36999999999999999999999987
Q ss_pred -----CCCceEEEEeccCChhhHHHhhHh--HHHHH-HHHhccccc--CC-CcC-ccccccchheeeccCcEEEeCCHHH
Q 012838 313 -----GLPWEVTAIALVDTIDGYKQQEKN--LISEF-KRLFGFLLK--KS-SLN-EVDGEIVHWVERCRPRKFGNVFEGE 380 (455)
Q Consensus 313 -----g~~~~vigVe~~g~~~~~~~~~~~--l~~~~-~~~ig~~~~--~~-~~~-~~~~~~~~l~~~~~~~~~~v~d~ei 380 (455)
++.++|+|||+.++.....+.... ...+. ...+....+ |. .+. ......+.++.++++..|.|+|+|+
T Consensus 192 ~~g~~~~~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~d~e~ 271 (319)
T PRK06381 192 DRGKTSRMPRMIGVSTSGGNQIVESFKRGSSEVVDLEVDEIRETAVNEPLVSYRSFDGDNALEAIYDSHGYAFGFSDDEM 271 (319)
T ss_pred hCCCcCCCCEEEEEeeCCCCHHHHHHHcCCCcccCCCcchhhhcccCCCcccccCCCHHHHHHHHHHcCCEEEEECHHHH
Confidence 789999999998864433221110 00000 000100000 00 000 0011234557788889999999999
Q ss_pred HHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCc
Q 012838 381 IEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTL 430 (455)
Q Consensus 381 ~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~ 430 (455)
++++++|+++|||++||+ +|+++|+++++.++.. .+++||+|||||..
T Consensus 272 ~~a~~~la~~egi~~eps-sa~alaa~~~~~~~~~-~~~~vv~i~tGg~~ 319 (319)
T PRK06381 272 VKYAELLRRMEGLNALPA-SASALAALVKYLKKNG-VNDNVVAVITGRRQ 319 (319)
T ss_pred HHHHHHHHHhCCcccCch-HHHHHHHHHHHHHcCC-CCCcEEEEecCCCC
Confidence 999999999999999997 7899999999876542 24899999999973
No 19
>PRK06260 threonine synthase; Validated
Probab=100.00 E-value=2.5e-42 Score=358.08 Aligned_cols=327 Identities=18% Similarity=0.148 Sum_probs=228.9
Q ss_pred CceeEEeeeHHHHHHHh-hhhhhhccC--CCcccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCCCc-eEEE
Q 012838 36 QGICNVRMSGEELLSRL-LDRKWALTS--PDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDR-CFYV 111 (455)
Q Consensus 36 ~~~~~~~~~~e~~~~~l-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~-~lyl 111 (455)
-|++++.|+.+.+...- ..+.|.... |.. .. .+. ...|+|||+++ ++|+ +.+ |. +||+
T Consensus 26 g~~l~~~y~~~~~~~~~~~~~~wry~~~lp~~--~~-~v~---l~~G~TPLv~~--~~l~-~~~---------g~~~l~~ 87 (397)
T PRK06260 26 GGLLEVIYDLDKIFDKLRGRGVWRYKELLPVK--KK-IVS---LNEGGTPLYRC--PNLE-KEL---------GVKELYV 87 (397)
T ss_pred CCeEEEEecchhhhhccCCcceeeehhhcCCC--CC-ccc---CCCCCCCeEEc--hhhH-HHh---------CCCcEEE
Confidence 48999999977553210 113453321 111 00 111 24599999999 8887 444 44 8999
Q ss_pred EeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCC-CccccchhhHHHHhCC
Q 012838 112 VRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGE-QPQILTGYNLISTIYG 187 (455)
Q Consensus 112 KrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~-~~~~~~~~~~~~~~~G 187 (455)
|+|++| | +||||||++.+++..|++.|.++||+ +||.+.+.+ +|+.+|++|+||||.. .+. .+..+++.||
T Consensus 88 K~E~~n-P-TGSfKdRga~~~v~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vP~~~~~~---~k~~~~~~~G 162 (397)
T PRK06260 88 KHEGAN-P-TGSFKDRGMTVGVTKALELGVKTVACASTGNTSASLAAYAARAGLKCYVLLPAGKVAL---GKLAQALLHG 162 (397)
T ss_pred EeCCCC-C-CcCcHHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEeCCCccH---HHHHHHHhcC
Confidence 999997 8 89999999999999999999999985 455443332 6779999999999976 332 3556789999
Q ss_pred c-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHH
Q 012838 188 K-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAV 266 (455)
Q Consensus 188 A-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~ 266 (455)
| |+.|+++ |++..+. +++ +.+. ..+|+++. .||.
T Consensus 163 A~vi~v~~~-~~~~~~~----a~~-------------------------------------~~~~-~g~y~~~~--~np~ 197 (397)
T PRK06260 163 AKVLEVDGN-FDDALDM----VVE-------------------------------------LAKE-GKIYLLNS--INPF 197 (397)
T ss_pred CEEEEECCc-HHHHHHH----HHH-------------------------------------HHhh-CCEEeecC--CCch
Confidence 9 9999874 5542221 111 1111 23566543 3899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcC------CCceEEEEeccCChhhHHHhhHh--HH
Q 012838 267 ALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLG------LPWEVTAIALVDTIDGYKQQEKN--LI 338 (455)
Q Consensus 267 ~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g------~~~~vigVe~~g~~~~~~~~~~~--l~ 338 (455)
..+|++|+++||++|+ ++..||+||+|+|+||+++|++++|+++. ..+||+|||++++.......... ..
T Consensus 198 ~~~G~~t~a~Ei~eQl--~~~~pd~vvvpvG~Gg~~~Gi~~~~~~l~~~G~i~~~prii~Vq~~g~~~~~~a~~~g~~~~ 275 (397)
T PRK06260 198 RLEGQKTIGFEIADQL--GWEVPDRVVLPVGNAGNISAIWKGFKELVELGIIDKLPKMTGIQAEGAAPIVEAIKKGKDEI 275 (397)
T ss_pred hhcchhhHHHHHHHHh--CCCCCCEEEEeCCcHHHHHHHHHHHHHHHhcCCcCCCCeEEEEecCCCcHHHHHHHcCCCcc
Confidence 9999999999999996 44469999999999999999999999764 34799999999976533221100 00
Q ss_pred HHH--HHHhcccc-cCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-
Q 012838 339 SEF--KRLFGFLL-KKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK- 414 (455)
Q Consensus 339 ~~~--~~~ig~~~-~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~- 414 (455)
... ..++.... ++. +......+..++++.+..+.|+|+|+++++++|++++||++||+ +|+++||++++.+++
T Consensus 276 ~~~~~~~tia~~i~i~~--p~~~~~~~~~l~~~~g~~v~V~d~e~~~a~~~la~~eGi~veps-saaalAa~~~l~~~g~ 352 (397)
T PRK06260 276 EPVENPETVATAIRIGN--PVNAPKALRAIRESGGTAEAVSDEEILDAQKLLARKEGIGVEPA-SAASVAGLIKLVEEGV 352 (397)
T ss_pred cccCCCCceeeeeEeCC--CCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHhCCCeeCch-HHHHHHHHHHHHHcCC
Confidence 000 01111110 110 11112234567778888999999999999999999999999997 799999999987764
Q ss_pred CCCCCeEEEEecCCC-cchhhh
Q 012838 415 LKQDADVVMLHTGGT-LGMFGL 435 (455)
Q Consensus 415 ~~~g~~VV~I~TGG~-~~~~~~ 435 (455)
+.++++||+|+||++ .+....
T Consensus 353 i~~~~~VV~i~tG~glK~~~~~ 374 (397)
T PRK06260 353 IDKDERVVCITTGHLLKDPDAA 374 (397)
T ss_pred CCCCCeEEEEeCCCccCchHHH
Confidence 567899999999965 475543
No 20
>PRK12483 threonine dehydratase; Reviewed
Probab=100.00 E-value=3.2e-42 Score=365.22 Aligned_cols=290 Identities=14% Similarity=0.114 Sum_probs=220.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+.+..+. +.+.++||++++ +||+
T Consensus 36 ~~TPL~~~--~~Ls-~~~---------g~~IylK~E~lq-p-tGSfK~RGA~n~i~~l~~~~~~~GVV~aSa--GNha~g 99 (521)
T PRK12483 36 RETPLQRA--PNLS-ARL---------GNQVLLKREDLQ-P-VFSFKIRGAYNKMARLPAEQLARGVITASA--GNHAQG 99 (521)
T ss_pred CCCCeeEc--hhhh-Hhh---------CCEEEEEEcCCC-C-CCchHHHHHHHHHHHhHHHHhcCcEEEECC--CHHHHH
Confidence 79999999 8888 443 679999999997 8 79999999988887654 445667897655 6676
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|..+|++|+||||...|.. ++..++.||| |+.++.. |++..+. |.++
T Consensus 100 vA~aA~~lGi~~~IvmP~~tp~~---Kv~~~r~~GAeVil~g~~-~d~a~~~----A~~l-------------------- 151 (521)
T PRK12483 100 VALAAARLGVKAVIVMPRTTPQL---KVDGVRAHGGEVVLHGES-FPDALAH----ALKL-------------------- 151 (521)
T ss_pred HHHHHHHhCCCEEEEECCCCCHH---HHHHHHHCCCEEEEECCC-HHHHHHH----HHHH--------------------
Confidence 46699999999999987654 4456899999 9998753 6542221 2221
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.+..+..|+.| +.||..++|+.|++.||++|+ + ..||+||+|+||||+++|++.++|.
T Consensus 152 -----------------a~e~g~~~v~p--fdd~~viaGqgTig~EI~eQ~--~-~~~D~VvvpvGgGGliaGia~~~K~ 209 (521)
T PRK12483 152 -----------------AEEEGLTFVPP--FDDPDVIAGQGTVAMEILRQH--P-GPLDAIFVPVGGGGLIAGIAAYVKY 209 (521)
T ss_pred -----------------HHhcCCeeeCC--CCChHHHHHHHHHHHHHHHHh--C-CCCCEEEEecCccHHHHHHHHHHHH
Confidence 11123345443 457889999999999999996 3 2599999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
++|+++|||||+++++....+.... . ...+++.+ .+..++...+.+++++.++.+.|+|+|+.++++
T Consensus 210 ~~p~vkVIGVep~~a~~~~~sl~~g~~~~~~~~~t~adGi-------av~~~g~~~~~~~~~~vd~vv~Vse~ei~~ai~ 282 (521)
T PRK12483 210 VRPEIKVIGVEPDDSNCLQAALAAGERVVLGQVGLFADGV-------AVAQIGEHTFELCRHYVDEVVTVSTDELCAAIK 282 (521)
T ss_pred hCCCCEEEEEEeCCCchhhHHHhcCCcccCCCCCceecee-------ccCCCCHHHHHHHHHhCCEEEEECHHHHHHHHH
Confidence 9999999999999976543221110 0 01111111 222233456677788999999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
.|++++|+++||+ +|+++||++++.++...++++||+|+||||+|...+.+-..+-
T Consensus 283 ~l~~~~~i~vEpa-gAaalAal~~~~~~~~~~g~~VV~IlsGgNid~~~l~~i~~r~ 338 (521)
T PRK12483 283 DIYDDTRSITEPA-GALAVAGIKKYAEREGIEGQTLVAIDSGANVNFDRLRHVAERA 338 (521)
T ss_pred HHHHhCCcEEeHH-HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999997 7899999998865432358999999999999988876655444
No 21
>PRK08329 threonine synthase; Validated
Probab=100.00 E-value=2.2e-42 Score=352.36 Aligned_cols=308 Identities=16% Similarity=0.081 Sum_probs=218.1
Q ss_pred CceeEEeeeHHHHHHH-hhhhhhhcc--CCCcccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEE
Q 012838 36 QGICNVRMSGEELLSR-LLDRKWALT--SPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVV 112 (455)
Q Consensus 36 ~~~~~~~~~~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylK 112 (455)
.|++++.|+++.+... -..+.|... .|..+- ..++ .-+|.|||+++ +.+||+|
T Consensus 22 ~~~l~~~~~~~~~~~~~~~~~~wry~~~lP~~~~--~~~s---l~eg~Tpl~~~-------------------~~~l~~K 77 (347)
T PRK08329 22 GGTLLVEREYGSFDSPREYLDMRRYIDYLPVDEE--FLPH---LTPPITPTVKR-------------------SIKVYFK 77 (347)
T ss_pred CCcEEEEeccccccccccccchhhhHHhCCCCCC--CCCc---CCCCCCccccC-------------------CCeEEEE
Confidence 5888999887643211 001344332 121110 0111 24589999887 4589999
Q ss_pred eCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEec--CchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-
Q 012838 113 RDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTC--GGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK- 188 (455)
Q Consensus 113 rEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~--G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA- 188 (455)
+|++| | +||||||++.+++..|++.|.++||++ ||.+.+.+ +|+++|++|+||||...+. .++.+++.|||
T Consensus 78 ~E~~n-P-tGSfKdRga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~---~k~~~~~~~GA~ 152 (347)
T PRK08329 78 LDYLQ-P-TGSFKDRGTYVTVAKLKEEGINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASK---EKISLLSRLGAE 152 (347)
T ss_pred eCCCC-C-CcCCHHHHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChH---HHHHHHHHcCCE
Confidence 99996 8 899999999999999999999999964 44332222 5779999999999987543 46678999999
Q ss_pred EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHH
Q 012838 189 VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL 268 (455)
Q Consensus 189 V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~ 268 (455)
|+.|++. +++ ..+ .|++ +.++...+|+. +..||...
T Consensus 153 v~~v~~~-~~~---~~~-~a~~-------------------------------------l~~~~~~~~~~--~~~np~~~ 188 (347)
T PRK08329 153 LHFVEGD-RME---VHE-EAVK-------------------------------------FSKRNNIPYVS--HWLNPYFL 188 (347)
T ss_pred EEEECCC-HHH---HHH-HHHH-------------------------------------HHHhcCCeecc--CCCCchhh
Confidence 9999864 442 211 1211 11222234433 35689999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc------CCCceEEEEeccCChhhHHHhhHhHHHHHH
Q 012838 269 LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL------GLPWEVTAIALVDTIDGYKQQEKNLISEFK 342 (455)
Q Consensus 269 ~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~------g~~~~vigVe~~g~~~~~~~~~~~l~~~~~ 342 (455)
+|++|+++||++|+ + .||+||+|+|+||+++|++++|+++ ++.++|++||+++........ . ....++
T Consensus 189 eG~~t~~~Ei~eql--~--~pD~vvvpvG~Gg~l~Gi~~g~kel~~~g~i~~~p~ii~Vq~~g~~~~~~~~-~-~~~t~a 262 (347)
T PRK08329 189 EGTKTIAYEIYEQI--G--VPDYAFVPVGSGTLFLGIWKGFKELHEMGEISKMPKLVAVQAEGYESLCKRS-K-SENKLA 262 (347)
T ss_pred ccchhHHHHHHHHc--C--CCCEEEEeCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCchHHhcc-C-CCCcee
Confidence 99999999999996 3 6999999999999999999999986 246899999999864432210 0 001111
Q ss_pred HHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeE
Q 012838 343 RLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADV 421 (455)
Q Consensus 343 ~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~V 421 (455)
+.++. +... .....+.+++++.+..+.|+|+|+++++++|++ +||++||+ +|+++|+++++.+++ +.++++|
T Consensus 263 ~gi~i---~~~~--~~~~~~~~l~~~~g~~~~V~d~e~~~a~~~l~~-~Gi~veps-sa~a~Aa~~~l~~~g~i~~~~~V 335 (347)
T PRK08329 263 DGIAI---PEPP--RKEEMLRALEESNGFCISVGEEETRAALHWLRR-MGFLVEPT-SAVALAAYWKLLEEGLIEGGSKV 335 (347)
T ss_pred eeEEe---CCCC--CHHHHHHHHHHhCCEEEEECHHHHHHHHHHHHh-cCceECcc-HHHHHHHHHHHHHhCCCCCCCeE
Confidence 11221 1110 011245667888899999999999999999985 89999997 899999999998774 6678999
Q ss_pred EEEecCCC
Q 012838 422 VMLHTGGT 429 (455)
Q Consensus 422 V~I~TGG~ 429 (455)
|++|||++
T Consensus 336 v~~~TG~g 343 (347)
T PRK08329 336 LLPLSGSG 343 (347)
T ss_pred EEEeCCCC
Confidence 99999965
No 22
>PLN02550 threonine dehydratase
Probab=100.00 E-value=3.1e-42 Score=367.54 Aligned_cols=290 Identities=14% Similarity=0.091 Sum_probs=220.9
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHH-HhCCCCEEEecCchhHHHH-
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLL-EDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A-~~~G~~~VVt~G~~~sNha- 155 (455)
-++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+.+.++ .+...++||++++ +|||
T Consensus 107 i~~TPL~~s--~~LS-~~~---------g~~IylK~E~lq-p-tGSFK~RGA~n~I~~L~~e~~~~GVV~aSa--GNhAq 170 (591)
T PLN02550 107 AIESPLQLA--KKLS-ERL---------GVKVLLKREDLQ-P-VFSFKLRGAYNMMAKLPKEQLDKGVICSSA--GNHAQ 170 (591)
T ss_pred ccCChhhhh--HHhh-Hhh---------CCEEEEEEcCCC-C-CCcHHHHHHHHHHHHHHHhcCCCCEEEECC--CHHHH
Confidence 389999999 8998 443 679999999997 8 8999999999998876 5566678997543 6676
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|+++|++|+||||..+|.. +...++.||| |+.++.. |++..+. |+++
T Consensus 171 gvA~aA~~lGika~IvmP~~tp~~---Kv~~~r~~GAeVvl~g~~-~dea~~~----A~~l------------------- 223 (591)
T PLN02550 171 GVALSAQRLGCDAVIAMPVTTPEI---KWQSVERLGATVVLVGDS-YDEAQAY----AKQR------------------- 223 (591)
T ss_pred HHHHHHHHcCCCEEEEECCCCCHH---HHHHHHHcCCEEEEeCCC-HHHHHHH----HHHH-------------------
Confidence 46699999999999987754 3455799999 9998754 6542221 2221
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
.+..+..|+.|. .||..++|+.|+|+||++|+ . ..+|+||+|+||||+++|++.+++
T Consensus 224 ------------------a~e~g~~fi~pf--ddp~viaGqgTig~EI~eQl--~-~~~D~VvvpVGgGGLiaGia~~lK 280 (591)
T PLN02550 224 ------------------ALEEGRTFIPPF--DHPDVIAGQGTVGMEIVRQH--Q-GPLHAIFVPVGGGGLIAGIAAYVK 280 (591)
T ss_pred ------------------HHhcCCEEECCC--CChHHHHHHHHHHHHHHHHc--C-CCCCEEEEEeChhHHHHHHHHHHH
Confidence 112234565543 47888899999999999996 2 258999999999999999999999
Q ss_pred hcCCCceEEEEeccCChhhHHHhhHh-H--HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 311 CLGLPWEVTAIALVDTIDGYKQQEKN-L--ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 311 ~~g~~~~vigVe~~g~~~~~~~~~~~-l--~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
+++|.+||||||++++.....+.... . ... ..++++ ++.+..++...+.+++++.|+.+.|+|+|+.+|++++
T Consensus 281 ~l~p~vkVIGVEp~~a~~~~~s~~~G~~v~~~~-~~tiAd---Giav~~~G~~t~~i~~~~vD~vV~Vsd~eI~~Ai~~l 356 (591)
T PLN02550 281 RVRPEVKIIGVEPSDANAMALSLHHGERVMLDQ-VGGFAD---GVAVKEVGEETFRLCRELVDGVVLVSRDAICASIKDM 356 (591)
T ss_pred HhCCCCEEEEEEECCChHHHHHHhcCCccccCC-CCCccc---eeecCCCCHHHHHHHHhhCCEEEEECHHHHHHHHHHH
Confidence 99999999999999976644332110 0 000 011111 1222334456777889999999999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHH
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQR 438 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~r 438 (455)
++++|+++||+ +|+++||++++.++...++++||+|+||||.|...+..-
T Consensus 357 ~e~~givvEpA-GA~alAall~~~~~~~~~g~~Vv~vlsGgNid~~~l~~v 406 (591)
T PLN02550 357 FEEKRSILEPA-GALALAGAEAYCKYYGLKDENVVAITSGANMNFDRLRIV 406 (591)
T ss_pred HHHCCCEEeHH-HHHHHHHHHHHHHhcCCCCCeEEEEecCCCCCHHHHHHH
Confidence 99999999997 789999999987543236889999999999998776544
No 23
>PRK07048 serine/threonine dehydratase; Validated
Probab=100.00 E-value=2.9e-42 Score=348.16 Aligned_cols=286 Identities=15% Similarity=0.103 Sum_probs=211.7
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++++ +.+ |.+||+|+|++| | +||||+|.+.+++.++. +.+.++||++++ +||+
T Consensus 23 ~~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~i~~~~~~~~~~~vv~aSs--GN~g~a 86 (321)
T PRK07048 23 HRTPVLTS--RTAD-ART---------GAQVFFKCENFQ-R-MGAFKFRGAYNALSQFSPEQRRAGVVTFSS--GNHAQA 86 (321)
T ss_pred CCCCCccc--hhhH-Hhc---------CCeEEEEeccCC-C-CCCeeHHHHHHHHHhhhHhhcCCcEEEeCC--CHHHHH
Confidence 89999999 8887 332 679999999997 8 79999999999998876 456678887544 5665
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...|+ .+..+++.||| |+.++.. +++..+. +++
T Consensus 87 lA~~a~~~G~~~~vvvp~~~~~---~k~~~~~~~GAeV~~~~~~-~~~~~~~----a~~--------------------- 137 (321)
T PRK07048 87 IALSARLLGIPATIVMPQDAPA---AKVAATRGYGGEVVTYDRY-TEDREEI----GRR--------------------- 137 (321)
T ss_pred HHHHHHHcCCCEEEEECCCCCH---HHHHHHHHCCCEEEEECCC-HHHHHHH----HHH---------------------
Confidence 4669999999999988653 35667899999 9999863 4432211 211
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
+.++.+..|+. +..||....|+.+++.||++|+ +.||+||+|+|||||++|++.++++
T Consensus 138 ----------------l~~~~g~~~~~--~~~~~~~~~g~~t~~~EI~~q~----~~~D~vv~~vGtGG~~~Gi~~~~k~ 195 (321)
T PRK07048 138 ----------------LAEERGLTLIP--PYDHPHVIAGQGTAAKELFEEV----GPLDALFVCLGGGGLLSGCALAARA 195 (321)
T ss_pred ----------------HHHhcCCEEEC--CCCCcchhhccchHHHHHHhhc----CCCCEEEEecChhHHHHHHHHHHHH
Confidence 12222233433 3456777889999999999996 3699999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-HHHH-HHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-LISE-FKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l~~~-~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
+++.++|||||+++++....+.... +... ...++..+ ...+.+....+..++++.++.+.|+|+|+++++++|++
T Consensus 196 ~~~~~~vigvep~~~~~~~~s~~~g~~~~~~~~~tia~g---~~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 272 (321)
T PRK07048 196 LSPGCKVYGVEPEAGNDGQQSFRSGEIVHIDTPRTIADG---AQTQHLGNYTFPIIRRLVDDIVTVSDAELVDAMRFFAE 272 (321)
T ss_pred hCCCCEEEEEeeCCChhHHHHHHcCCcccCCCCCCcccc---cccCCccHHHHHHHHHhCCceEEECHHHHHHHHHHHHH
Confidence 9999999999999876533221110 0000 00111111 01111222345566788899999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHH
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQ 437 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ 437 (455)
++||++||+ +++++++++++.+. .++++||+|+||||.+++.+.+
T Consensus 273 ~~gi~~eps-~a~~laa~~~~~~~--~~~~~vv~i~tGGn~~~~~~~~ 317 (321)
T PRK07048 273 RMKIVVEPT-GCLGAAAALRGKVP--LKGKRVGVIISGGNVDLARFAA 317 (321)
T ss_pred hCCceeccH-HHHHHHHHHhCchh--cCCCeEEEEeCCCCCCHHHHHH
Confidence 999999996 57999999987543 3588999999999999887654
No 24
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=100.00 E-value=4.7e-42 Score=363.82 Aligned_cols=293 Identities=15% Similarity=0.121 Sum_probs=222.8
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHH-HhCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLL-EDHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A-~~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+||||+| | +||||+|.+.+.+..+ .+++.++||++++ +||+
T Consensus 16 ~~TPL~~~--~~Ls-~~~---------g~~i~lK~E~lq-p-tgSfK~RgA~n~i~~l~~~~~~~gVV~aSa--GNha~~ 79 (499)
T TIGR01124 16 QETPLQKA--AKLS-ERL---------GNRILIKREDLQ-P-VFSFKLRGAYNKMAQLSPEQKARGVIAASA--GNHAQG 79 (499)
T ss_pred CCCCeeeh--HHHH-HHh---------CCEEEEEecCCC-C-CCCCHHHHHHHHHHHhhHHhcCCEEEEECC--CHHHHH
Confidence 79999999 8888 433 579999999996 8 7999999999888875 5666788998644 6776
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+++|++|+||||..+|.. ++..++.||| |+.++.. |++..+ +|.++
T Consensus 80 vA~aa~~~Gi~~~IvmP~~tp~~---Kv~~~r~~GA~Vvl~g~~-~d~a~~----~a~~l-------------------- 131 (499)
T TIGR01124 80 VAFSAARLGLKALIVMPETTPDI---KVDAVRGFGGEVVLHGAN-FDDAKA----KAIEL-------------------- 131 (499)
T ss_pred HHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEeCcC-HHHHHH----HHHHH--------------------
Confidence 46699999999999987654 4456899999 9988753 553221 12222
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.++.+..|+.| +.||...+|+.|+|.||++|+ + ..||+||+|+|||||++|++.+++.
T Consensus 132 -----------------a~~~g~~~i~p--~~~~~~i~G~gtig~EI~~q~--~-~~~D~vvvpvGgGGliaGia~~lk~ 189 (499)
T TIGR01124 132 -----------------SQEKGLTFIHP--FDDPLVIAGQGTLALEILRQV--A-NPLDAVFVPVGGGGLAAGVAALIKQ 189 (499)
T ss_pred -----------------HHhcCCEeeCC--CCChHHHHhhHHHHHHHHHhC--C-CCCCEEEEccCccHHHHHHHHHHHH
Confidence 22233455554 357889999999999999996 3 2699999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-H--HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-L--ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIA 388 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l--~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La 388 (455)
++|.++|||||++++.....+.... . .... .++.+ +..+..++..++.+++++.++++.|+|+|+.+|++.|+
T Consensus 190 ~~p~~kVIgVep~~~~~~~~s~~~g~~~~~~~~-~t~ad---giav~~~g~~~~~~~~~~vd~vv~V~d~ei~~ai~~l~ 265 (499)
T TIGR01124 190 LMPEIKVIGVEPTDSDCMKQALDAGEPVDLDQV-GLFAD---GVAVKRVGDETFRLCQQYLDDIVTVDTDEVCAAIKDLF 265 (499)
T ss_pred hCCCCEEEEEEECCChHHHHHHhcCCceeCCCC-CCccC---cccCCCccHHHHHHHHHhCCEEEEECHHHHHHHHHHHH
Confidence 9999999999999986543321110 0 0000 01111 12223344566777889999999999999999999999
Q ss_pred HHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 389 QLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 389 ~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
+++|+++||+ +|+++||+++++++...++++||+|+||||.+...+..-..+.
T Consensus 266 ~~~gii~Epa-gA~~lAal~~~~~~~~~~~~~vv~i~sG~n~~~~~l~~~~~r~ 318 (499)
T TIGR01124 266 EDTRAVAEPA-GALALAGLKKYVALHGIRGQTLVAILSGANMNFHRLRYVSERC 318 (499)
T ss_pred HhcCcEEech-HHHHHHHHHHhhhhcCCCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999997 8899999999876532258899999999999988876655444
No 25
>PRK08526 threonine dehydratase; Provisional
Probab=100.00 E-value=3.9e-42 Score=356.32 Aligned_cols=292 Identities=13% Similarity=0.100 Sum_probs=215.1
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhC-CCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDH-IVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~-G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+.+..+.+. +.++||++++ +||+
T Consensus 19 ~~TPl~~~--~~Ls-~~~---------g~~iylK~E~lq-p-tGSfK~RgA~n~i~~l~~~~~~~gVV~aSa--GNhg~a 82 (403)
T PRK08526 19 NKTPFAYA--PFLS-KIS---------GAEVYLKKENLQ-I-TGAYKIRGAYNKIANLSEEQKQHGVIAASA--GNHAQG 82 (403)
T ss_pred CCCCccch--HHHH-HHh---------CCeEEEEecCCC-C-CCCCHHHHHHHHHHhccHhhcCCEEEEECc--cHHHHH
Confidence 89999999 8888 433 679999999997 8 8999999999998876543 4578887533 5666
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+++|++|+||||...|.. +...++.||| |+.++.+ |++..+. |.++
T Consensus 83 vA~aa~~~Gi~~~IvmP~~~p~~---k~~~~r~~GA~Vv~~g~~-~~~a~~~----a~~~-------------------- 134 (403)
T PRK08526 83 VAISAKKFGIKAVIVMPEATPLL---KVSGTKALGAEVILKGDN-YDEAYAF----ALEY-------------------- 134 (403)
T ss_pred HHHHHHHcCCCEEEEEcCCCCHH---HHHHHHhCCCEEEEECCC-HHHHHHH----HHHH--------------------
Confidence 46699999999999987654 3455899999 9998763 5532221 2111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
....+.+|+.| +.||....|+.|++.||++|+ +.||+||+|+||||+++|++.++++
T Consensus 135 -----------------a~~~g~~~v~p--~~~~~~i~G~gtia~EI~eq~----~~~D~vvvpvGgGGl~aGia~~~k~ 191 (403)
T PRK08526 135 -----------------AKENNLTFIHP--FEDEEVMAGQGTIALEMLDEI----SDLDMVVVPVGGGGLISGIASAAKQ 191 (403)
T ss_pred -----------------HHhcCCEeeCC--CCCHHHHhhhHHHHHHHHHhc----CCCCEEEEecChHHHHHHHHHHHHH
Confidence 11223455444 457888999999999999996 3699999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-HHH-HHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-LIS-EFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l~~-~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
++|.++|||||+++++....+.... ... ....++.+ ++.+..+++..+.+..+..++.+.|+|+|+.+|++.|++
T Consensus 192 ~~p~~kvigVep~~~~~~~~s~~~g~~~~~~~~~tiad---giav~~~~~~~~~~~~~~vd~~v~V~d~ei~~A~~~l~~ 268 (403)
T PRK08526 192 INPNIKIIGVGAKGAPAMYESFHAKKIINSKSVRTIAD---GIAVRDASPINLAIILECVDDFVQVDDEEIANAILFLLE 268 (403)
T ss_pred hCCCCEEEEEEECCCChHHHHHHcCCcccCCCCCceec---cccCCCCCHHHHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 9999999999999987643221110 000 00011111 111222233445555677888999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
++|+++||+ +|+++|+++.... .+.++++||+|+||||.|...+..-..+-
T Consensus 269 ~~gi~ve~a-ga~~lAall~~~~-~~~~~~~Vv~ilsGGnid~~~~~~i~~~~ 319 (403)
T PRK08526 269 KQKIVVEGA-GAASVAALLHQKI-DLKKGKKIGVVLSGGNIDVQMLNIIIEKG 319 (403)
T ss_pred hcCcEeeHH-HHHHHHHHHhCcc-ccccCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 999999995 7899999875322 24468899999999999998876655443
No 26
>PRK06110 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-42 Score=346.44 Aligned_cols=287 Identities=14% Similarity=0.045 Sum_probs=212.2
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC--CCEEEecCchhHHHH-
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI--VTDLVTCGGCQSAHA- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G--~~~VVt~G~~~sNha- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+++++ .+.||++++ +||+
T Consensus 20 ~~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~Rga~~~l~~a~~~~~~~~~vv~aSs--GN~g~ 83 (322)
T PRK06110 20 PPTPQYRW--PLLA-ERL---------GCEVWVKHENHT-P-TGAFKVRGGLVYFDRLARRGPRVRGVISATR--GNHGQ 83 (322)
T ss_pred cCCCcccc--hhHH-HHh---------CCeEEEEeccCC-C-cCCcHHHHHHHHHHHhhhhcCCCceEEEECC--CHHHH
Confidence 89999999 8887 433 579999999997 8 79999999999999988764 467775322 4454
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|+++|++|+||||...+.. +..+++.||| |+.++.. +++.... |++
T Consensus 84 alA~~a~~~G~~~~ivvp~~~~~~---k~~~i~~~GA~V~~~~~~-~~~~~~~----a~~-------------------- 135 (322)
T PRK06110 84 SVAFAARRHGLAATIVVPHGNSVE---KNAAMRALGAELIEHGED-FQAAREE----AAR-------------------- 135 (322)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCHH---HHHHHHHcCCEEEEECCC-HHHHHHH----HHH--------------------
Confidence 56799999999999886543 4466899999 9888653 5432211 111
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
+.+. .++|++|.. ||...+||++++.||++|+ +.+|+||+|+|+||+++|++.+|+
T Consensus 136 -----------------~~~~-~~~~~~~~~--~~~~~~G~~t~~~Ei~~q~----~~~D~vv~pvG~Gg~~~Gv~~~~k 191 (322)
T PRK06110 136 -----------------LAAE-RGLHMVPSF--HPDLVRGVATYALELFRAV----PDLDVVYVPIGMGSGICGAIAARD 191 (322)
T ss_pred -----------------HHHh-cCCEEcCCC--CChHHhccchHHHHHHhhC----CCCCEEEEecCHHHHHHHHHHHHH
Confidence 1111 235666643 6778899999999999996 368999999999999999999999
Q ss_pred hcCCCceEEEEeccCChhhHHHhhHh-HHH-HHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHH
Q 012838 311 CLGLPWEVTAIALVDTIDGYKQQEKN-LIS-EFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIA 388 (455)
Q Consensus 311 ~~g~~~~vigVe~~g~~~~~~~~~~~-l~~-~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La 388 (455)
+.+++++|||||++++.......... ... ....+++.+ .....+.+..+.+++++.++.+.|+|+|+++++++|+
T Consensus 192 ~~~~~~~vi~Vep~~~~~~~~~~~~g~~~~~~~~~t~a~g---l~~~~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~ 268 (322)
T PRK06110 192 ALGLKTRIVGVVSAHAPAYALSFEAGRVVTTPVATTLADG---MACRTPDPEALEVIRAGADRIVRVTDDEVAAAMRAYF 268 (322)
T ss_pred HhCCCCEEEEEeeCCChHHHHHHHcCCcccCCCCCCcccc---cCCCCccHHHHHHHHHhCCeEEEECHHHHHHHHHHHH
Confidence 99999999999999876543221110 000 000111111 1111122234566678899999999999999999999
Q ss_pred HHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHH
Q 012838 389 QLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 389 ~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
+++|+++||+ +++++++++++.+. .++++||+|+||||+|+..+.+..
T Consensus 269 ~~~gi~~e~s-saa~laa~~~~~~~--~~~~~Vv~i~tGgn~d~~~~~~~~ 316 (322)
T PRK06110 269 TDTHNVAEGA-GAAALAAALQERER--LAGKRVGLVLSGGNIDRAVFARVL 316 (322)
T ss_pred HHcCcEEehH-HHHHHHHHHhChhh--hCCCcEEEEECCCCCCHHHHHHHH
Confidence 9999999995 78999999887543 357899999999999988876543
No 27
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=345.13 Aligned_cols=292 Identities=16% Similarity=0.139 Sum_probs=226.7
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-h-CCCCEEEecCchhHHHH-
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-D-HIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~-~G~~~VVt~G~~~sNha- 155 (455)
.+|||.+. +.|+ +.+ |.+||+|+|||+ | +||||.|++.+.+.... + +...+|||+++ +||+
T Consensus 24 ~~TPL~~s--~~Ls-~~~---------g~~v~lK~E~lQ-~-~gSFK~RGA~n~i~~Ls~e~~~~~gViaaSa--GNHaQ 87 (347)
T COG1171 24 NPTPLQRS--PSLS-ERL---------GAEIYLKRENLQ-P-VGSFKIRGAYNKLSSLSEEEERAAGVIAASA--GNHAQ 87 (347)
T ss_pred cCCCcccc--hhhH-Hhh---------CceEEEeeccCc-c-cccchhhhHHHHHHhcChhhhhcCceEEecC--CcHHH
Confidence 69999999 8888 433 789999999998 7 89999999998888864 2 45678998655 6777
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|.++|++++||||..+|..+. ..+|.||+ |++++.. |++..+. |++++
T Consensus 88 GvA~aa~~lGi~a~IvMP~~tp~~Kv---~a~r~~GaeVil~g~~-~dda~~~----a~~~a------------------ 141 (347)
T COG1171 88 GVAYAAKRLGIKATIVMPETTPKIKV---DATRGYGAEVILHGDN-FDDAYAA----AEELA------------------ 141 (347)
T ss_pred HHHHHHHHhCCCEEEEecCCCcHHHH---HHHHhcCCEEEEECCC-HHHHHHH----HHHHH------------------
Confidence 3569999999999999886643 44799999 9998874 7653332 33322
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
++.+..|+.|. .+|..++|+.|++.||.||+. ..||+||||+|+||+++|++.+++
T Consensus 142 -------------------~~~G~~~i~pf--D~p~viAGQGTi~lEileq~~---~~~d~v~vpvGGGGLisGia~~~k 197 (347)
T COG1171 142 -------------------EEEGLTFVPPF--DDPDVIAGQGTIALEILEQLP---DLPDAVFVPVGGGGLISGIATALK 197 (347)
T ss_pred -------------------HHcCCEEeCCC--CCcceeecccHHHHHHHHhcc---ccCCEEEEecCccHHHHHHHHHHH
Confidence 22233455443 367888899999999999962 237999999999999999999999
Q ss_pred hcCCCceEEEEeccCChhhHHHhhHh-HHHHH--HHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 311 CLGLPWEVTAIALVDTIDGYKQQEKN-LISEF--KRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 311 ~~g~~~~vigVe~~g~~~~~~~~~~~-l~~~~--~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
.+.|.++|||||+++++..+.+.... ..... ..++.+ +..+..+++.+|.+++++.++.+.|+|+|+.++|+.+
T Consensus 198 ~~~p~~~vIGVEp~~a~~~~~Sl~~G~~~~~~~~~~tiaD---G~av~~~g~~tf~i~~~~vd~~v~V~e~ei~~am~~l 274 (347)
T COG1171 198 ALSPEIKVIGVEPEGAPSMYASLKAGKIVVVLPDVGTIAD---GLAVKRPGDLTFEILRELVDDIVLVDEDEICAAMRDL 274 (347)
T ss_pred HhCCCCeEEEEeeCCChHHHHHHHcCCceeecCCCCcccc---ccccCCCCHHHHHHHHHcCCcEEEECHHHHHHHHHHH
Confidence 99999999999999988766554321 10000 011221 2234456778899999999999999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
++++++.+||+ ++.++|++++...+. .++++|++|+||||.|...+.+-..+
T Consensus 275 ~~~~~iI~Epa-GAlalAal~~~~~~~-~~g~~v~~ilSGgN~d~~~~~~v~~~ 326 (347)
T COG1171 275 FERTKIIAEPA-GALALAALLAGKIEP-LQGKTVVVILSGGNIDFERLAEVLER 326 (347)
T ss_pred HhcCCeecccc-HHHHHHHHHhhhhhh-cCCCeEEEEecCCCCCHHHHHHHHhc
Confidence 99999999996 689999999876553 46778999999999998877654443
No 28
>PRK07476 eutB threonine dehydratase; Provisional
Probab=100.00 E-value=5.4e-42 Score=346.36 Aligned_cols=283 Identities=11% Similarity=0.034 Sum_probs=207.8
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCE-EEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTD-LVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~-VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+++.|.+. ||++++ +||+
T Consensus 18 ~~TPl~~~--~~l~-~~~---------g~~l~~K~E~~n-p-tGS~K~R~a~~~i~~a~~~~~~~gvv~aSs--GN~g~a 81 (322)
T PRK07476 18 RRTPLVAS--ASLS-ARA---------GVPVWLKLETLQ-P-TGSFKLRGATNALLSLSAQERARGVVTAST--GNHGRA 81 (322)
T ss_pred CCCCceec--hhhH-Hhh---------CCeEEEEEccCC-C-CCCchHHHHHHHHHhhhhhhhCCeEEEECC--ChHHHH
Confidence 89999999 8887 433 679999999996 8 89999999999999998888765 886422 4555
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...++. +..+++.||| |+.++.. +++..+. +.++
T Consensus 82 lA~~a~~~G~~~~i~vp~~~~~~---k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~~-------------------- 133 (322)
T PRK07476 82 LAYAARALGIRATICMSRLVPAN---KVDAIRALGAEVRIVGRS-QDDAQAE----VERL-------------------- 133 (322)
T ss_pred HHHHHHHhCCCEEEEeCCCCCHH---HHHHHHHcCCEEEEECCC-HHHHHHH----HHHH--------------------
Confidence 46799999999999987643 5567899999 9998864 4432221 1111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.++.+.+|+.| ..||...+|+.+++.||++|+ +.+|+||+|+||||+++|++.+|++
T Consensus 134 -----------------~~~~g~~~~~~--~~n~~~~~g~~t~~~Ei~~Q~----~~~d~iv~~vG~GG~~~Gv~~~~k~ 190 (322)
T PRK07476 134 -----------------VREEGLTMVPP--FDDPRIIAGQGTIGLEILEAL----PDVATVLVPLSGGGLASGVAAAVKA 190 (322)
T ss_pred -----------------HHhcCCEEeCC--CCCcceeechhHHHHHHHHhC----cCCCEEEEEcChHHHHHHHHHHHHH
Confidence 11122345433 457888899999999999996 3689999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
++++++|||||++++...+.+.... . ...+++.++. + ........+.+.+...++.+.|+|+|++++++
T Consensus 191 ~~~~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~t~a~~l~~---~--~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~ 265 (322)
T PRK07476 191 IRPAIRVIGVSMERGAAMHASLAAGRPVQVEEVPTLADSLGG---G--IGLDNRYTFAMCRALLDDVVLLDEAEIAAGIR 265 (322)
T ss_pred hCCCCEEEEEEECCchHHHHHHHcCCceeCCCCCCccccccc---c--ccCCcHHHHHHHHhcCCeEEEECHHHHHHHHH
Confidence 9999999999999866433221110 0 0111111110 0 00011123345556778899999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCC-CCeEEEEecCCCcchhhhHH
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQ-DADVVMLHTGGTLGMFGLAQ 437 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~-g~~VV~I~TGG~~~~~~~~~ 437 (455)
+|++++||++||+ +++++|++++. .+.. +++||+|+|||+.+...+.+
T Consensus 266 ~l~~~~gi~ve~a-~a~~laal~~~---~~~~~~~~Vvvi~tGg~~~~~~~~~ 314 (322)
T PRK07476 266 HAYREERLVVEGA-GAVGIAALLAG---KIAARDGPIVVVVSGANIDMELHRR 314 (322)
T ss_pred HHHHhcCceEeCh-hHHHHHHHHhC---CcccCCCcEEEEECCCCCCHHHHHH
Confidence 9999999999996 78999998842 2223 48999999999999876543
No 29
>PRK09224 threonine dehydratase; Reviewed
Probab=100.00 E-value=2.1e-41 Score=359.90 Aligned_cols=293 Identities=15% Similarity=0.125 Sum_probs=221.0
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+||||+| | +||||+|.+.+++..+. +.+.++||++++ +||+
T Consensus 19 ~~TPL~~~--~~Ls-~~~---------g~~i~lK~E~lq-p-tgSfK~RgA~n~i~~l~~~~~~~gvV~aSa--GNha~a 82 (504)
T PRK09224 19 QETPLEKA--PKLS-ARL---------GNQVLLKREDLQ-P-VFSFKLRGAYNKMAQLTEEQLARGVITASA--GNHAQG 82 (504)
T ss_pred CCCCceeh--hHhH-HHh---------CCEEEEEecCCC-C-CCCChHHHHHHHHHhhhHHhcCCEEEEECc--CHHHHH
Confidence 79999999 8888 433 679999999996 8 79999999988888754 456788998754 6776
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||..+|.. ++..++.||| |+.++. .|++..+. |+++
T Consensus 83 vA~aa~~lGi~~~IvmP~~tp~~---K~~~~r~~GA~Vi~~g~-~~~~a~~~----a~~l-------------------- 134 (504)
T PRK09224 83 VALSAARLGIKAVIVMPVTTPDI---KVDAVRAFGGEVVLHGD-SFDEAYAH----AIEL-------------------- 134 (504)
T ss_pred HHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEECC-CHHHHHHH----HHHH--------------------
Confidence 46699999999999887643 4456899999 999875 36532221 2221
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.+..+..|+.| +.||....|+.|++.||++|+ + ..||+||+|+||||+++|++.+++.
T Consensus 135 -----------------~~~~g~~~v~~--f~~~~~i~G~gTi~~EI~~q~--~-~~~D~vvvpvGgGGliaGia~~lk~ 192 (504)
T PRK09224 135 -----------------AEEEGLTFIHP--FDDPDVIAGQGTIAMEILQQH--P-HPLDAVFVPVGGGGLIAGVAAYIKQ 192 (504)
T ss_pred -----------------HHhcCCEEeCC--CCCcHHHHhHHHHHHHHHHhc--c-CCCCEEEEecChhHHHHHHHHHHHH
Confidence 12223345444 357888999999999999996 3 2499999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-H--HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-L--ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIA 388 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l--~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La 388 (455)
++|+++|||||+++++..+.+.... . .+.. .++.+ ++.++.++...+.++++++++++.|+|+|+.+|++.|+
T Consensus 193 ~~p~~kVigVe~~~~~~~~~s~~~g~~~~~~~~-~~~ad---g~av~~~g~~~~~~~~~~vd~~v~Vsd~ei~~a~~~l~ 268 (504)
T PRK09224 193 LRPEIKVIGVEPEDSACLKAALEAGERVDLPQV-GLFAD---GVAVKRIGEETFRLCQEYVDDVITVDTDEICAAIKDVF 268 (504)
T ss_pred hCCCCEEEEEEECCChHHHHHHhcCCCccCCCC-CcccC---cccCCCccHHHHHHHHhcCCeEEEECHHHHHHHHHHHH
Confidence 9999999999999986544321110 0 0000 00111 11222233456777788999999999999999999999
Q ss_pred HHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 389 QLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 389 ~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
+++|+++||+ +|+++||++++.++...++++||+|+||||.+...+.+-..+.
T Consensus 269 ~~~~~~~epa-gA~~lAal~~~~~~~~~~g~~vv~i~sG~n~~~~~l~~~~~r~ 321 (504)
T PRK09224 269 EDTRSIAEPA-GALALAGLKKYVAQHGIEGETLVAILSGANMNFDRLRYVAERA 321 (504)
T ss_pred HhcCeEEcHH-HHHHHHHHHHhhhhcCCCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999997 8999999999876532248899999999999988876655444
No 30
>PRK06352 threonine synthase; Validated
Probab=100.00 E-value=1.1e-41 Score=347.62 Aligned_cols=289 Identities=15% Similarity=0.126 Sum_probs=208.2
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEec--CchhHHH
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTC--GGCQSAH 154 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~--G~~~sNh 154 (455)
..|+|||+++ ++|+ +.+ |.+||+|+|++| | +||||||++.+++.+|+++|.++||++ ||.+...
T Consensus 25 ~~G~TPL~~~--~~l~-~~~---------g~~l~~K~E~~n-p-tGS~KdR~a~~~i~~a~~~g~~~vV~aSsGN~G~Al 90 (351)
T PRK06352 25 AEGNTPLIPL--PNLS-KEL---------GVTLYGKYEGLN-P-TGSFKDRGMVMAVAKAKEEGAEAVICASTGNTSAAA 90 (351)
T ss_pred CCCCCCeeEc--HhhH-HHh---------CCeEEEEecCCC-C-ccChHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHH
Confidence 4599999999 8887 433 578999999996 8 899999999999999999999999963 4333222
Q ss_pred H-HHHHhCCeEEEEecCCC-ccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 155 A-TAVERGLKSHLLLRGEQ-PQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 155 a-~Aa~~Gl~~~iv~~~~~-~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+ +|+.+|++|+||||+.. +. .+..+++.||| |+.++.. +++..+. |++++
T Consensus 91 A~~aa~~G~~~~ivvp~~~~~~---~k~~~~~a~GA~V~~~~~~-~~~~~~~----a~~~~------------------- 143 (351)
T PRK06352 91 AAYATRAGLKAYIVIPEGKVAL---GKLAQAVMYGADIISIQGN-FDEALKS----VRELA------------------- 143 (351)
T ss_pred HHHHHHcCCcEEEEEeCCCCcH---HHHHHHHhcCCEEEEECCC-HHHHHHH----HHHHH-------------------
Confidence 2 57799999999999863 32 35567899999 9999864 5542222 22111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
+. ...|.+ +..||...+||.++++||++|+ + ..||+||+|+|||||++|++++|++
T Consensus 144 ------------------~~-~~~~~~--~~~n~~~~~G~~t~~~EI~~Q~--~-~~~D~vvv~vG~GG~~~Gi~~~lk~ 199 (351)
T PRK06352 144 ------------------ET-EAVTLV--NSVNPYRLEGQKTAAFEICEQL--G-SAPDVLAIPVGNAGNISAYWKGFKE 199 (351)
T ss_pred ------------------Hh-cCcccc--cCCCccceeeHHHHHHHHHHHc--C-CCCCEEEEECCchHHHHHHHHHHHH
Confidence 11 112222 2458888899999999999996 3 3799999999999999999999998
Q ss_pred cCCC-----ceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 312 LGLP-----WEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 312 ~g~~-----~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
+++. ++|||||++++..............+++.++ ++. +.........++++.+..+.|+|+|+++++++
T Consensus 200 ~~~~~~~~~~~vi~Vep~g~~~~~~g~~~~~~~~ia~~l~---~~~--~~~~~~~~~~~d~~~g~~~~V~d~e~~~a~r~ 274 (351)
T PRK06352 200 WNEAKASGLPRMHGFEAEGAAAIVQGKPIDNPETIATAIR---IGN--PASWGLAEAARDESGGYIHSVTDDEIVNAYKK 274 (351)
T ss_pred HHhcCCCCCCEEEEEeeCCCCHHHhCCCcCCCCcceeEEE---eCC--CCcHHHHHHHHHHhCCEEEEECHHHHHHHHHH
Confidence 7665 8999999998754221111000111111111 110 00000011223445566899999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhh-cCCCCCeEEEEecC-CCcchhhhH
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDE-KLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~-~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
|++++||++||+ +|+++|++++++++ .+.++++||+|+|| |+.++....
T Consensus 275 la~~eGi~veps-saaalAa~~~~~~~~~~~~~~~Vv~v~tg~G~~~~~~~~ 325 (351)
T PRK06352 275 IAAQDGVFIEPG-SAASLAGVIQHVANGTIKKGETVVCVFTGNGLKDPDTAM 325 (351)
T ss_pred HHhhcCceEchh-HHHHHHHHHHHHHcCCCCCCCcEEEEeCCCCcCChHHHH
Confidence 999999999997 89999999988764 34568899999999 888877654
No 31
>PRK06382 threonine dehydratase; Provisional
Probab=100.00 E-value=2.5e-41 Score=351.39 Aligned_cols=292 Identities=12% Similarity=0.071 Sum_probs=213.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC-CCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI-VTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G-~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+.+.+ .++||++++ +||+
T Consensus 24 ~~TPl~~~--~~ls-~~~---------g~~v~~K~E~~n-p-tGSfK~Rga~~~i~~~~~~~~~~gvv~aSs--GN~g~a 87 (406)
T PRK06382 24 NRTPLIHS--TTFG-DEY---------GGDIYFKLENFQ-K-TGSFKSRGAVFKFSKLSEDELRNGVITASA--GNHAQG 87 (406)
T ss_pred CCCCeeEh--hhhH-HHh---------CCEEEEEecCCC-C-CCCCHHHHHHHHHHhcchhccCCeEEEECC--CHHHHH
Confidence 89999999 8887 433 579999999997 8 89999999999998776544 356887544 5665
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...|.. +...++.||| |+.++.. |++..+. |+++
T Consensus 88 ~A~aa~~~G~~~~ivmp~~~~~~---k~~~~~~~GA~Vv~~~~~-~~~a~~~----a~~l-------------------- 139 (406)
T PRK06382 88 VAYAASINGIDAKIVMPEYTIPQ---KVNAVEAYGAHVILTGRD-YDEAHRY----ADKI-------------------- 139 (406)
T ss_pred HHHHHHHcCCCEEEEEcCCCHHH---HHHHHHHcCCEEEEECCC-HHHHHHH----HHHH--------------------
Confidence 46699999999999987543 3445899999 9988763 5542222 2221
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
......+|+. ++.||....|+.++++||++|+ +.||+||+|+||||+++|+++++++
T Consensus 140 -----------------a~~~~~~~v~--~~~~~~~i~g~~t~~~Ei~eq~----~~~d~vvvpvG~GG~~~Gv~~~~k~ 196 (406)
T PRK06382 140 -----------------AMDENRTFIE--AFNDRWVISGQGTIGLEIMEDL----PDLDQIIVPVGGGGLISGIALAAKH 196 (406)
T ss_pred -----------------HHhcCCEecC--ccCChHHHHHHHHHHHHHHHhc----CCCCEEEEeeChHHHHHHHHHHHHH
Confidence 1222233433 3457888999999999999996 3699999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-HHH-HHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-LIS-EFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l~~-~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
++|.++|+|||+++++....+.... ... ....++.. ++..+.+....+.+.+++.++.+.|+|+|++++++.|++
T Consensus 197 ~~p~~~vigVe~~~~~~~~~~~~~~~~~~~~~~~t~a~---gl~~~~~~~~~~~~~~~~~d~~v~V~d~ei~~a~~~l~~ 273 (406)
T PRK06382 197 INPNVKIIGIESELSDSMKASLREGKIVAHTSGVSICD---GISVKYPGDLTFDIAKNYVDDIVTVTEESVSKAIYKLFE 273 (406)
T ss_pred hCCCCEEEEEEECCChHHHHHHHcCCceecCCCCCccc---cccCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 9999999999999986543221110 000 00011111 111222223345667788999999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHHh
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSSF 443 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~~ 443 (455)
++||++||+ +|+++|+++.... ..++++||+|+||||.+...+..-+.+-+
T Consensus 274 ~~gi~~eps-ga~~laal~~~~~--~~~~~~Vv~i~sGGn~d~~~~~~~~~~~~ 324 (406)
T PRK06382 274 REKIVAEPS-GAVGLAAIMEGKV--DVKGKKVAIVVSGGNINPLLMSKIIYKEL 324 (406)
T ss_pred HcCceechH-HHHHHHHHHhccc--cCCCCEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 999999996 6788887764321 23578999999999999887776665543
No 32
>PLN02970 serine racemase
Probab=100.00 E-value=4.4e-41 Score=340.46 Aligned_cols=291 Identities=15% Similarity=0.091 Sum_probs=208.9
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEec--CchhHHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTC--GGCQSAHA 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~--G~~~sNha 155 (455)
++|||+++ ++++ +.+ |.+||+|+|++| | +||||||.+.+++..+. +.+.++||++ ||.+...+
T Consensus 26 ~~TPL~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGSfKdRga~~~i~~~~~~~~~~~vv~aSsGN~g~alA 91 (328)
T PLN02970 26 HRTPVLTS--SSLD-ALA---------GRSLFFKCECFQ-K-GGAFKFRGACNAIFSLSDDQAEKGVVTHSSGNHAAALA 91 (328)
T ss_pred CCCCeeec--hhhH-Hhh---------CCeEEEEecCCC-C-CCCcHHHHHHHHHHHhhHhhcCCeEEEECCcHHHHHHH
Confidence 89999999 8887 433 579999999996 8 79999999999998875 4556788864 33332222
Q ss_pred -HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhh
Q 012838 156 -TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQK 233 (455)
Q Consensus 156 -~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~ 233 (455)
+|+.+|++|+||||...+.. +...|+.||| |+.++.. ++.+.+. |+++
T Consensus 92 ~~a~~~G~~~~ivvp~~~~~~---k~~~~~~~GA~Vi~~~~~-~~~~~~~----a~~l---------------------- 141 (328)
T PLN02970 92 LAAKLRGIPAYIVVPKNAPAC---KVDAVIRYGGIITWCEPT-VESREAV----AARV---------------------- 141 (328)
T ss_pred HHHHHcCCCEEEEECCCCCHH---HHHHHHhcCCEEEEeCCC-HHHHHHH----HHHH----------------------
Confidence 57799999999999887644 3345899999 9999864 4432221 2211
Q ss_pred hhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcC
Q 012838 234 SRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLG 313 (455)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g 313 (455)
.+. ++.|++ .++.||...+||+++++||++|+ ..||+||+|+|||||++|++++|++.+
T Consensus 142 ---------------a~~-~g~~~~-~~~~n~~~~~g~~t~g~Ei~~ql----~~~D~vv~~vG~GG~~~Gi~~~lk~~~ 200 (328)
T PLN02970 142 ---------------QQE-TGAVLI-HPYNDGRVISGQGTIALEFLEQV----PELDVIIVPISGGGLISGIALAAKAIK 200 (328)
T ss_pred ---------------HHh-cCCEEe-CCCCCcchhhehHHHHHHHHHhc----cCCCEEEEeeCchHHHHHHHHHHHhcC
Confidence 112 223433 34567788899999999999996 359999999999999999999999999
Q ss_pred CCceEEEEeccCChhhHHHhhHh-HHH-HHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHh
Q 012838 314 LPWEVTAIALVDTIDGYKQQEKN-LIS-EFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT 391 (455)
Q Consensus 314 ~~~~vigVe~~g~~~~~~~~~~~-l~~-~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~e 391 (455)
+.++|||||++++.....+.... ... .-..++..+ +... +....+...++..++.+.|+|+|+++++++|++++
T Consensus 201 ~~~kvi~Vep~~~~~~~~s~~~g~~~~~~~~~tia~g---l~~~-~~~~~~~~~~~~~d~~v~V~d~e~~~a~~~la~~~ 276 (328)
T PLN02970 201 PSIKIIAAEPKGADDAAQSKAAGEIITLPVTNTIADG---LRAS-LGDLTWPVVRDLVDDVITVDDKEIIEAMKLCYERL 276 (328)
T ss_pred CCCEEEEEEECCCcHHHHHHHcCCceeCCCCCCcccc---ccCC-cCHHHHHHHHhhCCEEEEECHHHHHHHHHHHHHhc
Confidence 99999999999976543321110 000 000011110 0000 12233455667788899999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHhhh-c-CCC-CCeEEEEecCCCcchhhhHHHH
Q 012838 392 GILVDPVYTLAAWEMATLLSDE-K-LKQ-DADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 392 GI~veP~ysgaalAgl~~l~~~-~-~~~-g~~VV~I~TGG~~~~~~~~~ry 439 (455)
|+++||+ +|++++++++...+ . +.+ +++||+|+||||.++..+.+-+
T Consensus 277 gi~ve~s-~aa~laaa~~~~~~~~~~~~~~~~vv~v~~Ggn~~~~~~~~~~ 326 (328)
T PLN02970 277 KVVVEPS-GAIGLAAALSDSFRSNPAWKGCKNVGIVLSGGNVDLGVLWESF 326 (328)
T ss_pred CcEEeHH-HHHHHHHHHhCcccccccccCCCeEEEEECCCCCCHHHHHHHh
Confidence 9999996 78999997753322 2 223 4799999999999988776544
No 33
>TIGR02079 THD1 threonine dehydratase. This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been characterized by models TIGR01124 and TIGR01127. Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway.
Probab=100.00 E-value=5.3e-41 Score=348.97 Aligned_cols=288 Identities=15% Similarity=0.112 Sum_probs=212.1
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHH-HhCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLL-EDHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A-~~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+ .+.+.++||++++ +||+
T Consensus 15 ~~TPl~~~--~~ls-~~~---------g~~iy~K~E~~~-p-tGSfK~RgA~~~i~~l~~~~~~~gvv~aSs--GN~g~a 78 (409)
T TIGR02079 15 PHTPLQLN--ERLS-EKY---------GANIYLKREDLQ-P-VRSYKIRGAYNFLKQLSDAQLAKGVVCASA--GNHAQG 78 (409)
T ss_pred CCCCcccc--HHHH-HHh---------CCEEEEEecCCC-C-CCCcHHHHHHHHHHhCCHHhhCCEEEEECc--cHHHHH
Confidence 79999999 8888 433 579999999997 8 7999999999988874 3445678887654 6676
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEe--CCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYV--PRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v--~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+++|++|+||||...|.. +...++.||| |+.| .+..|++..+. |.++
T Consensus 79 ~A~~a~~~G~~~~iv~p~~~~~~---k~~~~~~~GA~vv~v~~~g~~~~~a~~~----a~~~------------------ 133 (409)
T TIGR02079 79 FAYACRHLGVHGTVFMPATTPKQ---KIDRVKIFGGEFIEIILVGDTFDQCAAA----AREH------------------ 133 (409)
T ss_pred HHHHHHHcCCCEEEEECCCCCHH---HHHHHHHcCCCeeEEEEeCCCHHHHHHH----HHHH------------------
Confidence 46699999999999987643 4456899998 5432 22235432211 2211
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
.++.+..| ++ ++.||...+|+.++++||++|+ . ..||+||+|+||||+++|++.+|
T Consensus 134 -------------------~~~~g~~~-~~-~~~~~~~~~g~~ti~~Ei~~q~--~-~~~D~vv~pvG~GG~~~Gia~~~ 189 (409)
T TIGR02079 134 -------------------VEDHGGTF-IP-PFDDPRIIEGQGTVAAEILDQL--P-EKPDYVVVPVGGGGLISGLTTYL 189 (409)
T ss_pred -------------------HHhcCCEE-eC-CCCCHhHhhhhHHHHHHHHHhc--C-CCCCEEEEEecHhHHHHHHHHHH
Confidence 11122334 43 3467888999999999999996 2 25999999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEA 383 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a 383 (455)
++++|.++|||||+++++....+.... . ...+++.+ .+..++...+.++....++.+.|+|+|+.+|
T Consensus 190 k~~~p~~~vigVep~~~~~~~~s~~~g~~~~~~~~~t~a~g~-------~v~~~g~~~~~~~~~~vd~vv~V~d~e~~~a 262 (409)
T TIGR02079 190 AGTSPKTKIIGVEPEGAPSMKASLEAGEVVTLDKIDNFVDGA-------AVKRVGDLNFKALKDVPDEVTLVPEGAVCTT 262 (409)
T ss_pred HHhCCCCEEEEEEeCCCCcHHHHHHCCCceecCCCCCeeccc-------cCCCCcHHHHHHHHHhCCcEEEECHHHHHHH
Confidence 999999999999999976543321110 0 01111111 1222333355566777889999999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 384 CHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 384 ~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
+++|++++|+++||+ +|+++|+++++.++ .++++||+|+||||.|+..+.+-..+
T Consensus 263 ~~~l~~~~gi~ve~a-gaa~lAa~~~~~~~--~~~~~Vv~ilsGgn~d~~~~~~~~~~ 317 (409)
T TIGR02079 263 ILDLYNLEGIVAEPA-GALSIAALERLGEE--IKGKTVVCVVSGGNNDIERTEEIRER 317 (409)
T ss_pred HHHHHHhcCceecch-HHHHHHHHHhhhhh--cCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 999999999999995 78999999887543 35899999999999998887654443
No 34
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=100.00 E-value=2.3e-41 Score=338.49 Aligned_cols=280 Identities=13% Similarity=0.072 Sum_probs=207.6
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC-CCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI-VTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G-~~~VVt~G~~~sNha-- 155 (455)
|+|||+++ ++|+ +.+ |.+||+|+|++| | +||||||.+.+++.++++.+ .++||++++ |||+
T Consensus 16 g~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tgS~Kdr~a~~~l~~~~~~~~~~~iv~~ss--GN~g~a 79 (304)
T cd01562 16 RRTPLLTS--PTLS-ELL---------GAEVYLKCENLQ-K-TGSFKIRGAYNKLLSLSEEERAKGVVAASA--GNHAQG 79 (304)
T ss_pred CCCCcccc--hhhH-HHh---------CCeEEEEeccCC-C-cCCcHHHhHHHHHHhcCHhhcCCcEEEECC--CHHHHH
Confidence 89999999 8887 433 579999999997 8 79999999999999988776 567886533 4554
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|++|||...+. .+..+++.||+ |+.+++. |++..+. +++
T Consensus 80 lA~~a~~~G~~~~ivvp~~~~~---~k~~~l~~~Ga~vi~~~~~-~~~~~~~----a~~--------------------- 130 (304)
T cd01562 80 VAYAAKLLGIPATIVMPETAPA---AKVDATRAYGAEVVLYGED-FDEAEAK----ARE--------------------- 130 (304)
T ss_pred HHHHHHHcCCCEEEEECCCCCH---HHHHHHHHcCCEEEEeCCC-HHHHHHH----HHH---------------------
Confidence 4669999999999987653 35567899999 9999874 5532221 221
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
+.+..+.+|+ .+..||....|+.++++||++|+ + .||+||+|+|||||++|++.+|++
T Consensus 131 ----------------la~~~~~~~~--~~~~n~~~~~g~~~~~~Ei~~q~--~--~~d~vv~~vGtGgt~~Gi~~~lk~ 188 (304)
T cd01562 131 ----------------LAEEEGLTFI--HPFDDPDVIAGQGTIGLEILEQV--P--DLDAVFVPVGGGGLIAGIATAVKA 188 (304)
T ss_pred ----------------HHHhcCCEEe--CCCCCcchhccHHHHHHHHHHhc--C--CCCEEEEecCHHHHHHHHHHHHHH
Confidence 1222233343 34557888899999999999996 3 499999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh--HHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN--LISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~--l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
.++.++|||||+.++...+...... ......+++.. ++....+....+.+.+++.+..+.|+|+|+++++++|++
T Consensus 189 ~~~~~kvigv~~~~~~~~~~~~~~g~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 265 (304)
T cd01562 189 LSPNTKVIGVEPEGAPAMAQSLAAGKPVTLPEVDTIAD---GLAVKRPGELTFEIIRKLVDDVVTVSEDEIAAAMLLLFE 265 (304)
T ss_pred hCCCCEEEEEEECCCchHHHHHHcCCcccCCCCCcccc---cccCCCchHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 9999999999998875433211000 00000001111 001111112234456778899999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcc
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLG 431 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~ 431 (455)
+|||++||+ ||+++++++++.++. ++++||+|||||+.+
T Consensus 266 ~eGi~~~ps-s~~a~a~~~~~~~~~--~~~~vv~i~tGG~~~ 304 (304)
T cd01562 266 REKLVAEPA-GALALAALLSGKLDL--KGKKVVVVLSGGNID 304 (304)
T ss_pred HcCceEchh-HHHHHHHHHhCcccc--CCCeEEEEecCCCCC
Confidence 999999997 889999999987643 688999999999964
No 35
>PRK06815 hypothetical protein; Provisional
Probab=100.00 E-value=6e-41 Score=338.05 Aligned_cols=283 Identities=15% Similarity=0.046 Sum_probs=209.5
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+++.++. +.+.++||++++ +||+
T Consensus 19 ~~TPLv~~--~~l~-~~~---------g~~i~~K~E~~n-p-tgS~KdR~a~~~~~~l~~~~~~~~vv~aSs--GN~g~a 82 (317)
T PRK06815 19 RVTPLEHS--PLLS-QHT---------GCEVYLKCEHLQ-H-TGSFKFRGASNKLRLLNEAQRQQGVITASS--GNHGQG 82 (317)
T ss_pred CCCCcccc--HhHH-Hhh---------CCeEEEEecCCC-C-CCCcHHHHHHHHHHhcchhhcCceEEEECC--ChHHHH
Confidence 79999999 8887 433 679999999997 8 89999999988887643 234466786422 4444
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...+. .++.+++.||| |+.++.. ++..... |++
T Consensus 83 lA~~a~~~G~~~~i~~p~~~~~---~k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~--------------------- 133 (317)
T PRK06815 83 VALAAKLAGIPVTVYAPEQASA---IKLDAIRALGAEVRLYGGD-ALNAELA----ARR--------------------- 133 (317)
T ss_pred HHHHHHHhCCCEEEEECCCCCH---HHHHHHHHCCCEEEEECCC-HHHHHHH----HHH---------------------
Confidence 4669999999999987653 35667899999 9999864 4432211 111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
+......+|+.| +.||....|+.++++||++|+ +.||+||+|+||||+++|++.+|++
T Consensus 134 ----------------~~~~~~~~~~~~--~~~~~~~~g~~t~a~Ei~~q~----~~~d~vv~~vG~Gg~~~Gi~~~~k~ 191 (317)
T PRK06815 134 ----------------AAEQQGKVYISP--YNDPQVIAGQGTIGMELVEQQ----PDLDAVFVAVGGGGLISGIATYLKT 191 (317)
T ss_pred ----------------HHHhcCCEEecC--CCChhhhcchhHHHHHHHHhc----CCCCEEEEECcHHHHHHHHHHHHHH
Confidence 112223345444 347788889999999999996 3599999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhH-hHH-----HHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEK-NLI-----SEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~-~l~-----~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
+++.++|+|||++++...+..... .+. ..+.+.++... . +....+.+.+++.++.+.|+|+|++++++
T Consensus 192 ~~~~~~vigVep~~~~~~~~~~~~g~~~~~~~~~t~~~gl~~~~---~---~~~~~~~~~~~~~~~~~~V~d~e~~~a~~ 265 (317)
T PRK06815 192 LSPKTEIIGCWPANSPSLYTSLEAGEIVEVAEQPTLSDGTAGGV---E---PGAITFPLCQQLIDQKVLVSEEEIKEAMR 265 (317)
T ss_pred hCCCCEEEEEEeCCCCcHHHHHHCCCcccCCCCCChhhhhccCC---c---ccHHHHHHHHHhCCeEEEECHHHHHHHHH
Confidence 999999999999997654432111 010 01122221110 0 11123445677889999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHH
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQ 437 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ 437 (455)
+|++++||++||+ +|+++|+++++.++ . ++++||+|+|||+.+...+.+
T Consensus 266 ~la~~~gi~veps-sg~alaa~~~~~~~-~-~~~~vv~i~tG~~~~~~~~~~ 314 (317)
T PRK06815 266 LIAETDRWLIEGA-AGVALAAALKLAPR-Y-QGKKVAVVLCGKNIVLEKYLE 314 (317)
T ss_pred HHHHhcCCeEecH-HHHHHHHHHhCchh-c-CCCcEEEEECCCCCCHHHHHH
Confidence 9999999999996 89999999988754 3 578999999999999877654
No 36
>PRK08198 threonine dehydratase; Provisional
Probab=100.00 E-value=6.4e-41 Score=348.39 Aligned_cols=284 Identities=13% Similarity=0.084 Sum_probs=214.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+++.++. +.+.++||++++ +||+
T Consensus 21 ~~TPl~~~--~~ls-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~i~~~~~~~~~~~vv~aSs--GN~g~a 84 (404)
T PRK08198 21 RRTPLEYS--RTLS-ELT---------GAEVYLKCENLQ-R-TGSFKIRGAYNKIASLSEEERARGVVAASA--GNHAQG 84 (404)
T ss_pred CCCCceeh--hhHH-HHh---------CCEEEEEECCCC-C-CCCCHHHHHHHHHHhccHhhcCCEEEEECC--CHHHHH
Confidence 89999999 8888 433 579999999997 8 89999999999998876 556788997544 5665
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...|.. +..+++.||| |+.++.+ +++..+. |.++
T Consensus 85 lA~~a~~~G~~~~iv~p~~~~~~---k~~~~~~~GA~Vi~~~~~-~~~~~~~----a~~~-------------------- 136 (404)
T PRK08198 85 VAYAASLLGIKATIVMPETAPLS---KVKATRSYGAEVVLHGDV-YDEALAK----AQEL-------------------- 136 (404)
T ss_pred HHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEECCC-HHHHHHH----HHHH--------------------
Confidence 46699999999999987543 4456899999 9988753 5532211 2111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.+..+.+|+ .++.||...+|+.|+|+||++|+ +.+|+||+|+||||+++|++.+|++
T Consensus 137 -----------------~~~~g~~~~--~~~~~~~~~~g~~t~a~EI~~q~----~~~d~vv~~vG~GG~~~Gi~~~~k~ 193 (404)
T PRK08198 137 -----------------AEETGATFV--HPFDDPDVIAGQGTIGLEILEDL----PDVDTVVVPIGGGGLISGVATAVKA 193 (404)
T ss_pred -----------------HHhcCCEec--CCCCCccHHHHHHHHHHHHHHhC----CCCCEEEEEeCHhHHHHHHHHHHHH
Confidence 111222333 34567888899999999999996 3689999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh------HHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN------LISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~------l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
+.|+++|||||+++++......... ...++++.+ .+..+....+.+++++.++.+.|+|+|++++++
T Consensus 194 ~~p~~kiigVe~~~~~~~~~~~~~g~~~~~~~~~t~a~g~-------~v~~~~~~~~~~~~~~~d~~v~V~d~e~~~a~~ 266 (404)
T PRK08198 194 LRPEVRVIGVQAEGAPAMPESLAAGRPVELESVDTIADGI-------AVKRPGDLTFEIIRELVDDVVTVSDEEIARAIL 266 (404)
T ss_pred hCCCCEEEEEEeCCChHHHHHHHcCCCEecCCCCcccccc-------ccCCcCHHHHHHHHHhCCEEEEECHHHHHHHHH
Confidence 9999999999999976543221000 011111111 111223344556778899999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHH
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
+|++++|+++||+ +|+++||++++.. +.++++||+|+||||.+...+..-+
T Consensus 267 ~l~~~~g~~~e~s-ga~~lAal~~~~~--~~~~~~vv~vl~ggn~~~~~l~~ii 317 (404)
T PRK08198 267 LLLERAKLVVEGA-GAVSVAALLSGKL--DVKGKKVVAVLSGGNIDVLLLSRVI 317 (404)
T ss_pred HHHHhcCeEEehH-HHHHHHHHHhchh--hcCCCeEEEEECCCCCCHHHHHHHH
Confidence 9999999999996 7899999988752 3568999999999999977765533
No 37
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=100.00 E-value=1.7e-40 Score=330.81 Aligned_cols=273 Identities=14% Similarity=0.071 Sum_probs=204.9
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEecCchhHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAH 154 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~G~~~sNh 154 (455)
|+|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..|++.|+ ++||++++ +||
T Consensus 1 g~TPl~~~--~~l~-~~~---------g~~i~~K~E~~~-p-tgS~K~R~a~~~l~~a~~~g~~~~~~~vv~~Ss--GN~ 64 (291)
T cd01561 1 GNTPLVRL--NRLS-PGT---------GAEIYAKLEFFN-P-GGSVKDRIALYMIEDAEKRGLLKPGTTIIEPTS--GNT 64 (291)
T ss_pred CCCCEEEc--cccC-CCC---------CCeEEEEecccC-C-CCcchHHHHHHHHHHHHHcCCCCCCCEEEEeCC--ChH
Confidence 68999999 8888 433 679999999996 8 699999999999999999987 67886432 555
Q ss_pred H-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHH
Q 012838 155 A-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEAS 228 (455)
Q Consensus 155 a-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~ 228 (455)
+ +|.++|++|+||||...+. .+..+++.||| |+.++...+...+++.+ .|++
T Consensus 65 g~alA~~a~~~G~~~~i~vp~~~~~---~k~~~~~~~Ga~v~~~~~~~~~~~~~~~~-~a~~------------------ 122 (291)
T cd01561 65 GIGLAMVAAAKGYRFIIVMPETMSE---EKRKLLRALGAEVILTPEAEADGMKGAIA-KARE------------------ 122 (291)
T ss_pred HHHHHHHHHHcCCeEEEEECCCCCH---HHHHHHHHcCCEEEEeCCCCcCCHHHHHH-HHHH------------------
Confidence 5 4669999999999987543 46677899999 99998752111112211 1111
Q ss_pred HHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHH-HHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHH
Q 012838 229 LTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVF-RLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~-t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
+....+. |+++.++.||..++|++ +++.||.+|+ ++ .||+||+|+|+|||++|++.
T Consensus 123 -------------------~~~~~~~-~~~~~~~~~p~~~~g~~~t~~~Ei~~ql--~~-~~d~vv~~~G~Gg~~~Gi~~ 179 (291)
T cd01561 123 -------------------LAAETPN-AFWLNQFENPANPEAHYETTAPEIWEQL--DG-KVDAFVAGVGTGGTITGVAR 179 (291)
T ss_pred -------------------HHhhCCC-cEEecCCCCchHHHHHHHHHHHHHHHHc--CC-CCCEEEEeCChHHHHHHHHH
Confidence 1222223 34556678999999987 9999999996 32 79999999999999999999
Q ss_pred HHHhcCCCceEEEEeccCChhhHH-HhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 308 GAICLGLPWEVTAIALVDTIDGYK-QQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 308 g~~~~g~~~~vigVe~~g~~~~~~-~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
+|+++++.++|||||++++..... ......+ +.++... ....+...+.+..+.|+|+|++++++.
T Consensus 180 ~~~~~~~~~~vi~Ve~~~~~~~~~~~~~~~~~----~gi~~~~----------~~~~~~~~~~~~~~~V~d~e~~~a~~~ 245 (291)
T cd01561 180 YLKEKNPNVRIVGVDPVGSVLFSGGPPGPHKI----EGIGAGF----------IPENLDRSLIDEVVRVSDEEAFAMARR 245 (291)
T ss_pred HHHHhCCCCEEEEEecCCCcccCCCCCCCCcC----CCCCCCC----------CCCccCchhCceeEEECHHHHHHHHHH
Confidence 999999999999999998754311 0001111 1122111 011234446778999999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCC
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGG 428 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG 428 (455)
|++++||++||+ +|++++++++++++ ..++++||+|+||+
T Consensus 246 l~~~~gi~~eps-sa~a~a~~~~~~~~-~~~~~~vv~v~~~~ 285 (291)
T cd01561 246 LAREEGLLVGGS-SGAAVAAALKLAKR-LGPGKTIVTILPDS 285 (291)
T ss_pred HHHHhCeeEccc-HHHHHHHHHHHHHh-cCCCCeEEEEECCC
Confidence 999999999997 89999999998765 34688999999994
No 38
>PRK10717 cysteine synthase A; Provisional
Probab=100.00 E-value=1.2e-40 Score=337.57 Aligned_cols=287 Identities=15% Similarity=0.067 Sum_probs=208.0
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEecCchhHH
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSA 153 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~G~~~sN 153 (455)
.++|||+++ ++++ +.+ |.+||+|+|++| | +||||+|++.+++.+|++.|. ++||++++ +|
T Consensus 11 ~g~TPL~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~Rga~~~v~~a~~~g~~~~g~~vv~aSs--GN 74 (330)
T PRK10717 11 IGNTPLIRL--NRAS-EAT---------GCEILGKAEFLN-P-GGSVKDRAALNIIWDAEKRGLLKPGGTIVEGTA--GN 74 (330)
T ss_pred hCCCceEEc--cccC-CCC---------CCeEEEEeeccC-C-CCCchHHHHHHHHHHHHHcCCCCCCCEEEEeCC--cH
Confidence 389999999 8888 433 579999999996 8 799999999999999999987 67886433 45
Q ss_pred HH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 154 HA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 154 ha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
|+ +|+.+|++|+||||...++ .+..+++.||| |+.++...|++.+...+ .+.++
T Consensus 75 ~g~alA~~a~~~G~~~~vv~p~~~~~---~k~~~~~~~GA~V~~~~~~~~~~~~~~~~-~a~~~---------------- 134 (330)
T PRK10717 75 TGIGLALVAAARGYKTVIVMPETQSQ---EKKDLLRALGAELVLVPAAPYANPNNYVK-GAGRL---------------- 134 (330)
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCCCH---HHHHHHHHcCCEEEEeCCcccccccchHH-HHHHH----------------
Confidence 54 4669999999999988653 25567899999 99998642332111111 01111
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
+.++....++.++++.++.||... .||.+++.||++|+ + ..||+||+|+||||+++|++
T Consensus 135 -----------------a~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~a~Ei~~ql--~-~~~d~iv~~vG~GG~~~Gi~ 194 (330)
T PRK10717 135 -----------------AEELVASEPNGAIWANQFDNPANREAHYETTGPEIWEQT--D-GKVDGFVCAVGTGGTLAGVS 194 (330)
T ss_pred -----------------HHHHHhhCCCCeEecCCCCChhhHHHHHHhHHHHHHHhc--C-CCCCEEEEecCchHHHHHHH
Confidence 111112222235567788899864 67999999999996 3 26899999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHhhH-hHH---HHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQEK-NLI---SEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIE 382 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~~~-~l~---~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~ 382 (455)
++|++..++++|+|||+++++ .+..... .+. ..+.+.++.+ .+ ...+.....++.+.|+|+|+++
T Consensus 195 ~~~k~~~~~~~vi~Vep~~~~-~~~~~~~g~~~~~~~~~~~gl~~~-------~~---~~~~~~~~~d~~v~V~d~e~~~ 263 (330)
T PRK10717 195 RYLKETNPKVKIVLADPTGSA-LYSYYKTGELKAEGSSITEGIGQG-------RI---TANLEGAPIDDAIRIPDEEALS 263 (330)
T ss_pred HHHHHhCCCCEEEEEcCCCCc-cccccccCCcCCCCCcccCcCCCC-------cC---CcccChhhCCEEEEECHHHHHH
Confidence 999999999999999999873 2221100 000 0111112211 11 1112333456799999999999
Q ss_pred HHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchh
Q 012838 383 ACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMF 433 (455)
Q Consensus 383 a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~ 433 (455)
++++|++++||++|| ++|++++++++++++ +.++++||+|+|| |...+.
T Consensus 264 a~~~l~~~~gi~vep-ssga~laa~~~l~~~-~~~~~~Vv~v~~g~g~ky~~ 313 (330)
T PRK10717 264 TAYRLLEEEGLCLGG-SSGINVAAALRLARE-LGPGHTIVTILCDSGERYQS 313 (330)
T ss_pred HHHHHHHhcCCeEee-cHHHHHHHHHHHHHh-cCCCCEEEEEECCCchhhcc
Confidence 999999999999999 589999999998764 4568899999999 665544
No 39
>PRK05638 threonine synthase; Validated
Probab=100.00 E-value=1.2e-40 Score=349.94 Aligned_cols=320 Identities=13% Similarity=0.096 Sum_probs=222.4
Q ss_pred CCceeEEeeeHHHHHHHhhhhhhhccCCCcccchhhcccc------ccccCCCCCcccccCCCCCCcCCCcccccCCCce
Q 012838 35 PQGICNVRMSGEELLSRLLDRKWALTSPDSKIHQIKLFTT------TEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRC 108 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~ 108 (455)
-.|++++.|+.+.+.... |. .....+||+..++| ...+|+|||+++ + ++ +.+ |.+
T Consensus 21 c~~~l~~~y~~~~~~~~~----~~--~~~~~~wry~~~lp~~~~~v~l~~G~TPLv~~--~-~~-~~~---------g~~ 81 (442)
T PRK05638 21 CGELLEIIYDYSSVDVRK----WK--NRDPGVWRYKELLPQVKKIISLGEGGTPLIRA--R-IS-EKL---------GEN 81 (442)
T ss_pred CCCcEEEEecccccchhh----hc--cCCCChhhhhhhCCCcCCccccCCCCCcEEcc--c-ch-HHh---------CCe
Confidence 358899999876442221 11 11234455433333 124699999997 4 44 222 569
Q ss_pred EEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHh
Q 012838 109 FYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTI 185 (455)
Q Consensus 109 lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~ 185 (455)
||+|+|++| | +||||||++.+++..|++.|.++||+ +||.+.+.| +|+.+|++|+||||...+. .+..+++.
T Consensus 82 l~~K~E~~n-P-tGSfKdR~a~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~---~k~~~~~~ 156 (442)
T PRK05638 82 VYIKDETRN-P-TGSFRDRLATVAVSYGLPYAANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDK---GKLIQMIA 156 (442)
T ss_pred EEEEeCCCC-C-CCChHHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCH---HHHHHHHh
Confidence 999999996 8 89999999999999999999999985 455443333 6779999999999987543 46677999
Q ss_pred CCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCc
Q 012838 186 YGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGD 264 (455)
Q Consensus 186 ~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n 264 (455)
||| |+.|+++ |++.... |+++ .+ ..++|+++ +..|
T Consensus 157 ~GA~vi~v~~~-~~~~~~~----a~~~-------------------------------------~~-~~~~~~~~-~~~n 192 (442)
T PRK05638 157 FGAKIIRYGES-VDEAIEY----AEEL-------------------------------------AR-LNGLYNVT-PEYN 192 (442)
T ss_pred cCcEEEEECCC-HHHHHHH----HHHH-------------------------------------HH-hCCeEecC-CCCC
Confidence 999 9999864 5532221 1111 11 13456655 5579
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCC------CceEEEEeccCChhhHHHhhHhHH
Q 012838 265 AVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGL------PWEVTAIALVDTIDGYKQQEKNLI 338 (455)
Q Consensus 265 p~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~------~~~vigVe~~g~~~~~~~~~~~l~ 338 (455)
|..++|++|+++||++|+ .||+||+|+|+||+++|++++|+++.+ .++|+|||++++...........
T Consensus 193 p~~~eG~~t~a~Ei~eq~-----~pD~vv~pvG~Gg~~~Gi~~gfkel~~~g~i~~~prii~Vq~~~~~p~~~~~~~~~- 266 (442)
T PRK05638 193 IIGLEGQKTIAFELWEEI-----NPTHVIVPTGSGSYLYSIYKGFKELLEIGVIEEIPKLIAVQTERCNPIASEILGNK- 266 (442)
T ss_pred hhHhhhHHHHHHHHHHHH-----CcCEEEEeCCchHHHHHHHHHHHHHHhCCcccCCCeEEEEecCCCCHHHHHHhcCC-
Confidence 999999999999999996 299999999999999999999998643 47999999988654332110000
Q ss_pred HHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCC
Q 012838 339 SEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQ 417 (455)
Q Consensus 339 ~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~ 417 (455)
.....+++.+ +....+......+.+++++.+..+.++|+++.++++.++ ++||++||+ +|+++||++++.+++ +.+
T Consensus 267 ~~~~~t~a~g-l~~~~p~~~~~~~~~i~~~~g~~~~v~d~~i~~a~~~l~-~eGi~~eps-saaa~Aa~~~~~~~g~i~~ 343 (442)
T PRK05638 267 TKCNETKALG-LYVKNPVMKEYVSEAIKESGGTAVVVNEEEIMAGEKLLA-KEGIFAELS-SAVVMPALLKLGEEGYIEK 343 (442)
T ss_pred CCCCCceeee-EeeCCCCCHHHHHHHHHHhCCEEEEECHHHHHHHHHHHH-hcCceecch-HHHHHHHHHHHHHcCCCCC
Confidence 0000111111 000001111223455677777778888999888888876 589999997 899999999998764 567
Q ss_pred CCeEEEEecCCC-cc
Q 012838 418 DADVVMLHTGGT-LG 431 (455)
Q Consensus 418 g~~VV~I~TGG~-~~ 431 (455)
+++||+|+||++ .+
T Consensus 344 ~~~Vv~i~tG~g~k~ 358 (442)
T PRK05638 344 GDKVVLVVTGSGLKG 358 (442)
T ss_pred CCeEEEEeCCCCCCC
Confidence 899999999955 44
No 40
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=100.00 E-value=3.1e-40 Score=332.68 Aligned_cols=284 Identities=12% Similarity=0.004 Sum_probs=206.7
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEe--cCchhHHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVT--CGGCQSAHA 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt--~G~~~sNha 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+. +.+.++||+ +||.+...+
T Consensus 18 ~~TPl~~~--~~l~-~~~---------g~~l~~K~E~~n-p-tGS~K~R~a~~~i~~~~~~~~~~~vv~aSsGN~g~alA 83 (317)
T TIGR02991 18 EETPLVES--PSLS-ELC---------GVPVHLKLEHRQ-T-TGSFKLRGATNAVLSLSDTQRAAGVVAASTGNHGRALA 83 (317)
T ss_pred CCCCceec--hhhH-Hhh---------CCeEEEEeccCC-C-CCCcHHHHHHHHHHhhhHhccCCeEEEECCCHHHHHHH
Confidence 89999999 8887 333 578999999996 8 89999999999998765 445677885 344332222
Q ss_pred -HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhh
Q 012838 156 -TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQK 233 (455)
Q Consensus 156 -~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~ 233 (455)
+|+++|++|+||||...+. .+..+++.||| |+.++.. +++..+. ++++
T Consensus 84 ~~a~~~G~~~~v~~p~~~~~---~k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~~---------------------- 133 (317)
T TIGR02991 84 YAAAEEGVRATICMSELVPQ---NKVDEIRRLGAEVRIVGRS-QDDAQEE----VERL---------------------- 133 (317)
T ss_pred HHHHHhCCCEEEEcCCCCCH---HHHHHHHHcCCEEEEeCCC-HHHHHHH----HHHH----------------------
Confidence 5779999999999988653 35566899999 9999864 5542222 1111
Q ss_pred hhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcC
Q 012838 234 SRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLG 313 (455)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g 313 (455)
.+.. +.|++ .++.||...+|++++++||++|+ +.+|+||+|+|+|||++|++++|++++
T Consensus 134 ---------------~~~~-g~~~~-~~~~n~~~~~g~~t~a~Ei~~q~----~~~d~vvv~~G~Gg~~~Gi~~~~k~~~ 192 (317)
T TIGR02991 134 ---------------VADR-GLTML-PPFDHPDIVAGQGTLGLEVVEQM----PDLATVLVPLSGGGLASGVAMAVKAAR 192 (317)
T ss_pred ---------------HHhc-CCEee-CCCCChHHHhhHHHHHHHHHHhC----CCCCEEEEEcChhHHHHHHHHHHHHhC
Confidence 1111 22333 34568899999999999999996 358999999999999999999999999
Q ss_pred CCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 314 LPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 314 ~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
+.++|||||++++...+.+.... . ...+++.++.+ ++. .....+.+.++..++.+.|+|+|+++++++|
T Consensus 193 p~~~vigvep~~~~~~~~s~~~g~~~~~~~~~tia~~l~~g-~~~----~~~~~~~~~~~~vd~~v~V~d~e~~~a~~~l 267 (317)
T TIGR02991 193 PDTRVIGVSMERGAAMKASLQAGRPVLVAELPTLADSLGGG-IGL----DNRVTFAMCKALLDEIVLVSEAEIAAGIRHA 267 (317)
T ss_pred CCCEEEEEEECCchHHHHHHHcCCcccCCCCCChhhhhhhc-cCC----CCHHHHHHHHHhCCeEEEECHHHHHHHHHHH
Confidence 99999999998766544321110 0 01122222100 010 1112345566778899999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhH
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLA 436 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~ 436 (455)
++++|+++||+ +++++|+++.. .+..+++||+|+||||.+...+.
T Consensus 268 ~~~~g~~ve~s-~a~~~Aal~~~---~~~~~~~vvvvltG~n~~~~~~~ 312 (317)
T TIGR02991 268 YAEEREIVEGA-GAVGIAALLAG---KIKNPGPCAVIVSGRNIDMDLHK 312 (317)
T ss_pred HHhCCcEEcch-HHHHHHHHHcC---ccccCCcEEEEeCCCCCCHHHHH
Confidence 99999999996 78899999742 23347899999999999977654
No 41
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=100.00 E-value=1.5e-40 Score=332.51 Aligned_cols=276 Identities=16% Similarity=0.097 Sum_probs=205.6
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEecCchhHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAH 154 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~G~~~sNh 154 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++..+++.|. ++||++++ +||
T Consensus 6 g~TPL~~~--~~l~-~~~---------g~~i~~K~E~~~-p-tGS~K~R~a~~~~~~a~~~g~~~~g~~vv~aSs--GN~ 69 (299)
T TIGR01136 6 GNTPLVRL--NRLA-PGC---------DARVLAKLEGRN-P-SGSVKDRIALSMIEDAEKRGLLKPGDTIIEATS--GNT 69 (299)
T ss_pred CCCceEEc--cccC-CCC---------CceEEEEEcccC-C-CCCccHHHHHHHHHHHHHcCCCCCCCEEEEeCC--ChH
Confidence 78999999 8888 432 579999999996 8 899999999999999999987 67885433 445
Q ss_pred H-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCc-hhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 155 A-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTH-YAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 155 a-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~-~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
+ +|..+|++|+||||...+. .++.+++.||| |+.++... +++ +.+ .|++
T Consensus 70 g~alA~~a~~~G~~~~i~vp~~~~~---~k~~~~~~~GA~v~~~~~~~~~~~---~~~-~a~~----------------- 125 (299)
T TIGR01136 70 GIALAMVAAAKGYKLILTMPETMSL---ERRKLLRAYGAELILTPAEEGMKG---AID-KAEE----------------- 125 (299)
T ss_pred HHHHHHHHHHcCCcEEEEECCCCCH---HHHHHHHHcCCEEEEeCCCCChHH---HHH-HHHH-----------------
Confidence 4 4669999999999987653 35567899999 99998641 232 211 1111
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHH-HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVA-LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~-~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
+.+.. +.|+++.++.||.. ..||.+++.||++|+ ++ .||+||+|+|+||+++|++
T Consensus 126 --------------------~~~~~-~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ql--~~-~~d~iv~~vG~Gg~~~G~~ 181 (299)
T TIGR01136 126 --------------------LAAET-NKYVMLDQFENPANPEAHYKTTGPEIWRDT--DG-RIDHFVAGVGTGGTITGVG 181 (299)
T ss_pred --------------------HHhhC-CCeEecCCCCCchhHHHHHHHHHHHHHHhc--CC-CCCEEEEcCchhHHHHHHH
Confidence 12222 23556667777765 678999999999996 32 6999999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
.+|+++++.++|+|||++++.....+.... ..+ ..++... ..+.+.....++.+.|+|+|+++++++
T Consensus 182 ~~~~~~~~~~~vi~Ve~~~~~~~~~~~~~~--~~~-~~i~~~~----------~~~~~~~~~~d~~~~V~d~e~~~a~~~ 248 (299)
T TIGR01136 182 RYLKEQNPNIKIVAVEPAESPVLSGGEPGP--HKI-QGIGAGF----------IPKILDLSLIDEVITVSDEDAIETARR 248 (299)
T ss_pred HHHHHhCCCCEEEEEecCCCccccCCCCCC--ccC-CCCCCCC----------CCccCChhhCCEEEEECHHHHHHHHHH
Confidence 999999999999999999876533221000 000 1111110 111233455678999999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcch
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGM 432 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~ 432 (455)
|++++||++||+ +|+++++++++.++...++++||+|+|| |...+
T Consensus 249 l~~~~gi~~e~s-saa~~a~~~~~~~~~~~~~~~vv~i~~d~g~ky~ 294 (299)
T TIGR01136 249 LAREEGILVGIS-SGAAVAAALKLAKRLENADKVIVAILPDTGERYL 294 (299)
T ss_pred HHHHhCceEcch-HHHHHHHHHHHHHhcCCCCCEEEEEECCCCcccc
Confidence 999999999996 8999999999876533458899999998 55443
No 42
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=100.00 E-value=6.5e-41 Score=345.74 Aligned_cols=290 Identities=14% Similarity=0.132 Sum_probs=213.3
Q ss_pred CCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC-CEEEecCchhHHHH----
Q 012838 81 GPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-TDLVTCGGCQSAHA---- 155 (455)
Q Consensus 81 TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~-~~VVt~G~~~sNha---- 155 (455)
|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+++.++.+.+. ++||++++ +||+
T Consensus 1 TPl~~~--~~ls-~~~---------g~~i~~K~E~~~-p-tgS~K~R~a~~~i~~~~~~~~~~~vv~aSs--GN~g~alA 64 (380)
T TIGR01127 1 TPLIYS--TTLS-DIT---------GSEVYLKLENLQ-K-TGSFKIRGALNKIANLSEDQRQRGVVAASA--GNHAQGVA 64 (380)
T ss_pred CCceeh--HHHH-HHh---------CCeEEEEecCCC-C-CCCcHHHHHHHHHHhcchhccCCEEEEECC--CHHHHHHH
Confidence 899999 8888 433 679999999997 8 899999999999999887775 56886544 5565
Q ss_pred -HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhh
Q 012838 156 -TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQK 233 (455)
Q Consensus 156 -~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~ 233 (455)
+|+++|++|+||||...|.. +..+++.||| |++++.+ +++..+ +|+++
T Consensus 65 ~~a~~~G~~~~iv~p~~~~~~---k~~~~~~~GA~V~~~~~~-~~~a~~----~a~~~---------------------- 114 (380)
T TIGR01127 65 YAAKKFGIKAVIVMPESAPPS---KVKATKSYGAEVILHGDD-YDEAYA----FATSL---------------------- 114 (380)
T ss_pred HHHHHcCCCEEEEEcCCCcHH---HHHHHHHCCCEEEEECCC-HHHHHH----HHHHH----------------------
Confidence 46699999999999987643 5567899999 9988753 553221 12221
Q ss_pred hhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcC
Q 012838 234 SRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLG 313 (455)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g 313 (455)
.+..+..| ++ ++.||....|+.+++.||++|+ +.||+||+|+||||+++|++.+|+++.
T Consensus 115 ---------------~~~~~~~~-~~-~~~~~~~~~g~~t~~~Ei~~q~----~~~D~vv~~vG~Gg~~aGi~~~~k~~~ 173 (380)
T TIGR01127 115 ---------------AEEEGRVF-VH-PFDDEFVMAGQGTIGLEIMEDI----PDVDTVIVPVGGGGLISGVASAAKQIN 173 (380)
T ss_pred ---------------HHhcCCEe-cC-CCCChhhhhhhHHHHHHHHHhC----CCCCEEEEEeChHHHHHHHHHHHHHhC
Confidence 12222333 33 3457888899999999999996 369999999999999999999999999
Q ss_pred CCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 314 LPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 314 ~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
|.++|||||++++.....+.... . ..++++.+ .+..+....+.+++++.++.+.|+|+|+.+|+++|
T Consensus 174 p~~kvigVe~~~~~~~~~~~~~g~~~~~~~~~~~a~g~-------~~~~~~~~~~~~~~~~vd~~v~V~d~e~~~a~~~l 246 (380)
T TIGR01127 174 PNVKVIGVEAEGAPSMYESLREGKIKAVESVRTIADGI-------AVKKPGDLTFNIIKEYVDDVVTVDEEEIANAIYLL 246 (380)
T ss_pred CCCEEEEEEECCChHHHHHHHcCCceecCCCCCeecch-------hCCCccHHHHHHHHHhCCEEEEECHHHHHHHHHHH
Confidence 99999999999976533221100 0 01111111 11122233455677888999999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHHhccccCC
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSSFHSLKDG 449 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~~~~~~~~ 449 (455)
++++|+++||+ +|+++|++++... . .++++||+|+||||+|...+. +..+. +...++
T Consensus 247 ~~~~gi~~e~s-~a~~laa~~~~~~-~-~~~~~vv~i~sGGn~d~d~l~-~vi~~-gl~~~g 303 (380)
T TIGR01127 247 LERHKILAEGA-GAAGVAALLEQKV-D-VKGKKIAVVLSGGNIDLNLLN-KIIEK-GLVKSG 303 (380)
T ss_pred HHhcCeEechH-HHHHHHHHHhCcc-c-cCCCeEEEEeCCCCCCHHHHH-HHHHH-HHHhCC
Confidence 99999999996 6889999986532 1 358899999999999966543 33333 444443
No 43
>PRK08639 threonine dehydratase; Validated
Probab=100.00 E-value=9e-41 Score=348.58 Aligned_cols=289 Identities=15% Similarity=0.110 Sum_probs=212.9
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHH-HhCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLL-EDHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A-~~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+++.++ .+.+.++||++++ +||+
T Consensus 24 ~~TPl~~~--~~ls-~~~---------g~~l~~K~E~~~-p-tGSfK~RgA~~~i~~l~~~~~~~~Vv~aSs--GN~g~a 87 (420)
T PRK08639 24 PETPLQRN--DYLS-EKY---------GANVYLKREDLQ-P-VRSYKLRGAYNAISQLSDEELAAGVVCASA--GNHAQG 87 (420)
T ss_pred cCCCccch--HHHH-HHh---------CCEEEEEecCCC-C-CCCcHHHHHHHHHHhCCHHhhCCEEEEECc--cHHHHH
Confidence 89999999 8887 433 679999999997 8 8999999999988874 3444578887654 5666
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeC--CCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVP--RTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~--~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|+||||...|.. +...++.||| |+.|. +..+++ +.+ .|.++
T Consensus 88 lA~~a~~~G~~~~IvmP~~~~~~---k~~~~r~~GA~vv~v~~~g~~~~~---a~~-~a~~~------------------ 142 (420)
T PRK08639 88 VAYACRHLGIPGVIFMPVTTPQQ---KIDQVRFFGGEFVEIVLVGDTFDD---SAA-AAQEY------------------ 142 (420)
T ss_pred HHHHHHHcCCCEEEEECCCChHH---HHHHHHHcCCCeeEEEEeCcCHHH---HHH-HHHHH------------------
Confidence 46699999999999987643 4456899998 64432 233443 221 12211
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCC--CCEEEEeCCCcchHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKR--AIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~--pD~vvvpvGtGgt~~Gl~~ 307 (455)
.+..+..|+. ++.||...+|+.|+++||++|+. .. ||+||+|+||||+++|++.
T Consensus 143 -------------------a~~~g~~~~~--~~~~~~~~~G~~tig~EI~eq~~---~~~~~D~vv~~vG~GG~~aGva~ 198 (420)
T PRK08639 143 -------------------AEETGATFIP--PFDDPDVIAGQGTVAVEILEQLE---KEGSPDYVFVPVGGGGLISGVTT 198 (420)
T ss_pred -------------------HHhcCCcccC--CCCChhHhcchhHHHHHHHHhcc---ccCCCCEEEEecChhHHHHHHHH
Confidence 1112233433 34588889999999999999972 23 9999999999999999999
Q ss_pred HHHhcCCCceEEEEeccCChhhHHHhhHhH------HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHH
Q 012838 308 GAICLGLPWEVTAIALVDTIDGYKQQEKNL------ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEI 381 (455)
Q Consensus 308 g~~~~g~~~~vigVe~~g~~~~~~~~~~~l------~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~ 381 (455)
++++.+|+++|||||+++++....+..... ...+++.+ .+..++...+.+++++.++.+.|+|+|+.
T Consensus 199 ~~k~~~p~~~vigVep~~~~~~~~s~~~g~~~~~~~~~t~a~gi-------~v~~~g~~~~~~~~~~vd~~v~V~d~ei~ 271 (420)
T PRK08639 199 YLKERSPKTKIIGVEPAGAASMKAALEAGKPVTLEKIDKFVDGA-------AVARVGDLTFEILKDVVDDVVLVPEGAVC 271 (420)
T ss_pred HHHHhCCCCEEEEEEECCCCcHHHHHhCCCceeCCCCCCeeccc-------ccCCccHHHHHHHHHhCCeEEEECHHHHH
Confidence 999999999999999999765432211100 01111111 12223334566677889999999999999
Q ss_pred HHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 382 EACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 382 ~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
+++++|++++||++||+ +|+++|+++++.++ + ++++||+|+||||.++..+.+-..+-
T Consensus 272 ~a~~~l~~~~gi~~e~s-ga~~lAal~~~~~~-~-~~~~vv~v~sGgn~d~~~~~~~~~~~ 329 (420)
T PRK08639 272 TTILELYNKEGIVAEPA-GALSIAALELYKDE-I-KGKTVVCVISGGNNDIERMPEIKERS 329 (420)
T ss_pred HHHHHHHHhcCceecch-HHHHHHHHHhhhhh-c-CCCeEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999996 78999999886543 3 68999999999999988876654443
No 44
>PRK08638 threonine dehydratase; Validated
Probab=100.00 E-value=1.3e-40 Score=337.23 Aligned_cols=294 Identities=12% Similarity=0.070 Sum_probs=210.8
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHh-CCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLED-HIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~-~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||||.+.+++.++.+ .+.++||++++ +||+
T Consensus 26 ~~TPlv~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~KdR~a~~~i~~~~~~~~~~~vv~~Ss--GN~g~a 89 (333)
T PRK08638 26 RKTPLPRS--NYLS-ERC---------KGEIFLKLENMQ-R-TGSFKIRGAFNKLSSLTDAEKRKGVVACSA--GNHAQG 89 (333)
T ss_pred cCCCceec--hhhH-Hhh---------CCeEEEEeccCC-c-cCCcHHHHHHHHHHhccHHhcCCeEEEeCC--cHHHHH
Confidence 89999999 8887 433 569999999997 8 899999999999988654 55677886433 3444
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...+.. +..+++.||| |+.+++. +++..+. |+++
T Consensus 90 lA~~aa~~G~~~~iv~p~~~~~~---k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~~-------------------- 141 (333)
T PRK08638 90 VALSCALLGIDGKVVMPKGAPKS---KVAATCGYGAEVVLHGDN-FNDTIAK----VEEI-------------------- 141 (333)
T ss_pred HHHHHHHcCCCEEEEeCCCCcHH---HHHHHHHcCCEEEEECcC-HHHHHHH----HHHH--------------------
Confidence 57799999999999886533 5567899999 9988753 5432221 2211
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.+..+. |++ .++.||...+||.++++||++|+ + .||+||+|+||||+++|++.+|++
T Consensus 142 -----------------a~~~g~-~~~-~~~~~~~~~~g~~t~a~Ei~~q~--~--~~d~vv~~vG~Gg~~~Gv~~~lk~ 198 (333)
T PRK08638 142 -----------------VEEEGR-TFI-PPYDDPKVIAGQGTIGLEILEDL--W--DVDTVIVPIGGGGLIAGIAVALKS 198 (333)
T ss_pred -----------------HHhcCC-EEc-CcCCCcchhccccHHHHHHHhhc--C--CCCEEEEEeChhHHHHHHHHHHHH
Confidence 111222 333 34568888999999999999996 2 589999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-HHH-HHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-LIS-EFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l~~-~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
.+++++|||||++++...+.+.... ... ....+++.+ +....+....+.+.+++.++.+.|+|+|+++++++|++
T Consensus 199 ~~~~~~vigVep~g~~~~~~s~~~g~~~~~~~~~ti~~g---l~~~~p~~~~~~~~~~~~d~~v~Vsd~ea~~a~~~l~~ 275 (333)
T PRK08638 199 INPTIHIIGVQSENVHGMAASFYAGEITTHRTTGTLADG---CDVSRPGNLTYEIVRELVDDIVLVSEDEIRNAMKDLIQ 275 (333)
T ss_pred hCCCCEEEEEEECCCchHHHHHHCCCcccCCCCCCeecc---ccCCCccHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 9999999999999875433221110 000 000011111 11111222233445677889999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHHh
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSSF 443 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~~ 443 (455)
++|+++||+ +|+++|++.........++++||+|+||||.++..+.+...+-+
T Consensus 276 ~~gi~~e~s-gA~~~Aa~~~~~~~~~~~~~~vv~v~~Ggn~~~~~~~~~~~~~~ 328 (333)
T PRK08638 276 RNKVVTEGA-GALATAALLSGKLDQYIQNKKVVAIISGGNVDLSRVSQITGHVV 328 (333)
T ss_pred HcCCeechh-HHHHHHHHHhCCcccccCCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999995 67777777643222223688999999999999998877655443
No 45
>PRK06608 threonine dehydratase; Provisional
Probab=100.00 E-value=2.8e-40 Score=335.54 Aligned_cols=286 Identities=12% Similarity=0.104 Sum_probs=213.4
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC--CEEEecCchhHHHH-
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV--TDLVTCGGCQSAHA- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~--~~VVt~G~~~sNha- 155 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|++.+++.+|+++|. ++||++++ +||+
T Consensus 22 ~~TPl~~~--~~l~-~~~---------g~~l~~K~E~~n-p-tGS~K~R~a~~~v~~a~~~g~~~~~vv~~Ss--GN~g~ 85 (338)
T PRK06608 22 HLTPIVHS--ESLN-EML---------GHEIFFKVESLQ-K-TGAFKVRGVLNHLLELKEQGKLPDKIVAYST--GNHGQ 85 (338)
T ss_pred cCCCccch--HhHH-HHh---------CCEEEEEeCCCC-C-CCCcHHHHHHHHHHHhhhhcCcCCeEEEECC--CHHHH
Confidence 89999999 8888 433 679999999996 8 899999999999999999997 68886422 4554
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|+.+|++|+||||...++. +..+++.||| |+.++. ++ +..+. ++
T Consensus 86 alA~~a~~~G~~~~vv~p~~~~~~---k~~~l~~~GA~V~~~~~--~~---~~~~~-a~--------------------- 135 (338)
T PRK06608 86 AVAYASKLFGIKTRIYLPLNTSKV---KQQAALYYGGEVILTNT--RQ---EAEEK-AK--------------------- 135 (338)
T ss_pred HHHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEECC--HH---HHHHH-HH---------------------
Confidence 46699999999999886543 5567899999 998864 22 22111 11
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
+ . ..++.|++|. +.||...+|+.+++.||++|+ ++ .||+||+|+|||||++|++.+++
T Consensus 136 ----------------~-~-~~~~~~~~~~-~~~~~~~~g~~t~a~Ei~~q~--~~-~~D~vv~~vG~GGt~~Gi~~~~k 193 (338)
T PRK06608 136 ----------------E-D-EEQGFYYIHP-SDSDSTIAGAGTLCYEALQQL--GF-SPDAIFASCGGGGLISGTYLAKE 193 (338)
T ss_pred ----------------H-H-HhCCCEEcCC-CCCHHHhccHHHHHHHHHHhc--CC-CcCEEEEeechhHHHHHHHHHHH
Confidence 1 1 1234566654 457888899999999999996 42 69999999999999999999999
Q ss_pred hcCCCceEEEEeccCChhhHHHhhHh-H------HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHH
Q 012838 311 CLGLPWEVTAIALVDTIDGYKQQEKN-L------ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEA 383 (455)
Q Consensus 311 ~~g~~~~vigVe~~g~~~~~~~~~~~-l------~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a 383 (455)
+.++.++|+|||+++++..+.+.... . ...+.+.++ .+.+....+.+.+. .++.+.|+|+|++++
T Consensus 194 ~~~~~~~vigVep~~~~~~~~s~~~g~~~~~~~~~~t~~~gl~-------~~~~~~~~~~~~~~-~d~~v~Vsd~e~~~a 265 (338)
T PRK06608 194 LISPTSLLIGSEPLNANDAYLSLKNNKIYRLNYSPNTIADGLK-------TLSVSARTFEYLKK-LDDFYLVEEYEIYYW 265 (338)
T ss_pred hcCCCCEEEEEeeCCChHHHHHHHcCCeEeCCCCCCCeecccC-------CCCCCHHHHHHHHh-CCCEEEECHHHHHHH
Confidence 99999999999999876533221100 0 001111111 11112223444343 577999999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHH
Q 012838 384 CHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSS 442 (455)
Q Consensus 384 ~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~ 442 (455)
+++|++++|+++||+ +|++++++++++++ ..++++||+|+||||.+...+.+-+...
T Consensus 266 ~~~l~~~~gi~veps-saa~laa~~~~~~~-~~~~~~Vv~v~tgg~~d~~~~~~~~~~~ 322 (338)
T PRK06608 266 TAWLTHLLKVICEPS-SAINMVAVVNWLKT-QSKPQKLLVILSGGNIDPILYNELWKED 322 (338)
T ss_pred HHHHHHHcCcEEchH-HHHHHHHHHhhchh-hcCCCeEEEEeCCCccCHHHHHHHHHHh
Confidence 999999999999996 78999999988654 3468899999999999988777655543
No 46
>PRK06450 threonine synthase; Validated
Probab=100.00 E-value=2.4e-40 Score=335.83 Aligned_cols=300 Identities=15% Similarity=0.062 Sum_probs=209.4
Q ss_pred CceeEEeeeHHHHHHHhhhhhhhccCCCcccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCC
Q 012838 36 QGICNVRMSGEELLSRLLDRKWALTSPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDD 115 (455)
Q Consensus 36 ~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEd 115 (455)
-|++++.|+.+.. ...|....|... + ... .-+|+|||++. .+||+|+|.
T Consensus 25 g~~l~~~~d~~~~-----~~~~~~~lp~~~--~-~vs---lgeG~TPLv~~--------------------~~l~~K~E~ 73 (338)
T PRK06450 25 GGPFEILIDFEFD-----KNLERKNFPYIK--H-FIS---LGEGRTPLIKK--------------------GNIWFKLDF 73 (338)
T ss_pred CCEeEEeeccccc-----chhhHhhCCCCc--C-CCC---CCCCCCCceec--------------------CCEEEEecC
Confidence 4899999997632 135522223221 1 122 25699999986 259999999
Q ss_pred CCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEE
Q 012838 116 LLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTY 191 (455)
Q Consensus 116 l~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~ 191 (455)
+| | +||||||.+.+++.+|+++|.++|++ +||.+.+.+ +|+++|++|+||||...+.. ++.+++.||| |+.
T Consensus 74 ~n-P-TGSfKDRga~~~i~~a~~~g~~~vv~aSsGN~g~slA~~aa~~G~~~~i~vP~~~~~~---k~~~i~~~GA~vi~ 148 (338)
T PRK06450 74 LN-P-TGSYKDRGSVTLISYLAEKGIKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGG---KLKQIESYGAEVVR 148 (338)
T ss_pred CC-C-cCCCHHHHHHHHHHHHHHcCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCHH---HHHHHHHcCCEEEE
Confidence 97 8 89999999999999999999999984 455443333 67899999999999986543 5567899999 999
Q ss_pred eCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHH
Q 012838 192 VPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGV 271 (455)
Q Consensus 192 v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~ 271 (455)
|++. |++..++ + +.....| + .+..||...+|+
T Consensus 149 v~~~-~~~~~~~----a-----------------------------------------~~~g~~~-~-~~~~np~~ieG~ 180 (338)
T PRK06450 149 VRGS-REDVAKA----A-----------------------------------------ENSGYYY-A-SHVLQPQFRDGI 180 (338)
T ss_pred ECCC-HHHHHHH----H-----------------------------------------HhcCeEe-c-cCCCCccHHHHH
Confidence 9864 5431111 0 0111223 2 334589999999
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCC------CceEEEEeccCChhhHHHhhH-hHHH-HHHH
Q 012838 272 FRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGL------PWEVTAIALVDTIDGYKQQEK-NLIS-EFKR 343 (455)
Q Consensus 272 ~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~------~~~vigVe~~g~~~~~~~~~~-~l~~-~~~~ 343 (455)
+|+++||+||+ +|..||+||+|+|+||+++|++++|+++.+ .+||||||++++......... .... ...+
T Consensus 181 kTia~EI~eql--~~~~pD~vvvpvG~Ggll~Gi~~g~~el~~~G~i~~~prii~Vq~~g~~p~~~a~~~~~~~~~~~~~ 258 (338)
T PRK06450 181 RTLAYEIAKDL--DWKIPNYVFIPVSAGTLLLGVYSGFKHLLDSGVISEMPKIVAVQTEQVSPLCAKFKGISYTPPDKVT 258 (338)
T ss_pred HHHHHHHHHHc--CCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCccCCCeEEEEeeCCCCHHHHHhcCCCCCCCCCCC
Confidence 99999999996 544699999999999999999999998643 489999999996543322100 0000 0001
Q ss_pred HhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEE
Q 012838 344 LFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVM 423 (455)
Q Consensus 344 ~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~ 423 (455)
+++.+. ....+......+.++++. +..+.|+|+|+++++++|++ +||++||+ +|+++|+++++ ++++||+
T Consensus 259 tia~~l-~~~~p~~~~~~~~~i~~~-g~~v~V~d~ei~~a~~~La~-~Gi~veps-saaalAa~~~l------~~~~vv~ 328 (338)
T PRK06450 259 SIADAL-VSTRPFLLDYMVKALSEY-GECIVVSDNEIVEAWKELAK-KGLLVEYS-SATVYAAYKKY------SVNDSVL 328 (338)
T ss_pred cceeee-ecCCCCCHHHHHHHHHhc-CcEEEECHHHHHHHHHHHHH-cCCEEChh-HHHHHHHHHHC------CCCCEEE
Confidence 111110 000000111234455665 78999999999999999986 79999996 78999999875 2578999
Q ss_pred EecC-CCcc
Q 012838 424 LHTG-GTLG 431 (455)
Q Consensus 424 I~TG-G~~~ 431 (455)
|+|| |+.+
T Consensus 329 vltG~glK~ 337 (338)
T PRK06450 329 VLTGSGLKV 337 (338)
T ss_pred EeCCCCccC
Confidence 9999 5554
No 47
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=325.31 Aligned_cols=281 Identities=17% Similarity=0.102 Sum_probs=216.2
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEE--ecCchhH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLV--TCGGCQS 152 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VV--t~G~~~s 152 (455)
|+|||+++ .+++ +. .+++||+|.|.+| | +||.|||.+.+++.+|++.|. ++|| |+||++.
T Consensus 10 G~TPlvrL--~~~~-~~---------~~~~i~~KlE~~N-P-~gSvKDR~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI 75 (300)
T COG0031 10 GNTPLVRL--NRLS-PG---------TGVEIYAKLESFN-P-GGSVKDRIALYMIEDAEKRGLLKPGGTIVEATSGNTGI 75 (300)
T ss_pred CCCCcEee--cccC-CC---------CCceEEEEhhhcC-C-CCchhHHHHHHHHHHHHHcCCCCCCCEEEEcCCChHHH
Confidence 89999999 8887 31 1579999999996 9 799999999999999999985 6788 7899887
Q ss_pred HHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 153 AHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 153 Nha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
..| +|+.+|+++++|||+.++.. +..++++||| |+.++... .....+.+
T Consensus 76 ~LA~vaa~~Gy~~iivmP~~~S~e---r~~~l~a~GAevi~t~~~~-g~~~~a~~------------------------- 126 (300)
T COG0031 76 ALAMVAAAKGYRLIIVMPETMSQE---RRKLLRALGAEVILTPGAP-GNMKGAIE------------------------- 126 (300)
T ss_pred HHHHHHHHcCCcEEEEeCCCCCHH---HHHHHHHcCCEEEEcCCCC-CchHHHHH-------------------------
Confidence 766 78899999999999987654 3456899999 99998721 10112221
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
.++++.+..++.++.+.|+.||.+. .+|.+++.||++|+ + ..+|+||+++|||||++|+++++
T Consensus 127 -------------~a~el~~~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~--~-g~~d~fVagvGTGGTitGvar~L 190 (300)
T COG0031 127 -------------RAKELAAEIPGYAVWLNQFENPANPEAHYETTGPEIWQQT--D-GKVDAFVAGVGTGGTITGVARYL 190 (300)
T ss_pred -------------HHHHHHHhCCCceEchhhcCCCccHHHHHhhhHHHHHHHh--C-CCCCEEEEeCCcchhHHHHHHHH
Confidence 1222334455656777888888764 46668899999997 3 35999999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
|+..|+++|++|||++++-.......+.+ +.+|.+++|. .+..+..|+.+.|+|+++++++|+|++
T Consensus 191 k~~~p~i~iv~vdP~~S~~~~~G~g~~~i----~GIG~~~ip~----------~~~~~~iD~v~~V~d~~A~~~~r~La~ 256 (300)
T COG0031 191 KERNPNVRIVAVDPEGSVLLSGGEGPHKI----EGIGAGFVPE----------NLDLDLIDEVIRVSDEEAIATARRLAR 256 (300)
T ss_pred HhhCCCcEEEEECCCCCcccCCCCCCccc----CCCCCCcCCc----------ccccccCceEEEECHHHHHHHHHHHHH
Confidence 99999999999999997642211011122 2235444331 234556788999999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
+|||+++++ ||++++++++++++ .+++++||+|+ .+..+||.+
T Consensus 257 ~eGilvG~S-sGA~~~aa~~~a~~-~~~g~~IVti~-------pD~G~RYls 299 (300)
T COG0031 257 EEGLLVGIS-SGAALAAALKLAKE-LPAGKTIVTIL-------PDSGERYLS 299 (300)
T ss_pred HhCeeeccc-HHHHHHHHHHHHHh-cCCCCeEEEEE-------CCCcccccC
Confidence 999999985 89999999999875 46688998887 555566654
No 48
>PLN02569 threonine synthase
Probab=100.00 E-value=1.3e-39 Score=343.27 Aligned_cols=331 Identities=15% Similarity=0.077 Sum_probs=229.0
Q ss_pred CCceeEEeeeHHHHHH-------H-hhhhhhhccCC-Ccccchhhc-ccc--------ccccCCCCCcccccCCCCCCc-
Q 012838 35 PQGICNVRMSGEELLS-------R-LLDRKWALTSP-DSKIHQIKL-FTT--------TEKHGGGPLGGISFLNNTCPF- 95 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~~-------~-l~~~~~~~~~~-~~~~~~~~~-~~~--------~~~~g~TPL~~~~~~~l~~~~- 95 (455)
-.|++++.|+.+.+.. . +..+.+....+ ...+||+.. ++| .+.+|+|||+++ ++|+ +.
T Consensus 70 cgg~l~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~wry~~~~lP~~~~~~~vsl~eG~TPLv~~--~~l~-~~~ 146 (484)
T PLN02569 70 SGGLLDVRHDMEALKRYDGKYWRALFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSLFEGNSNLFWA--ERLG-KEF 146 (484)
T ss_pred CCCeEEEecchhhhccccchhhhhhHhcccccccCCCCCCccccccccCCCCCcccceecCCCCCceeEh--hhhh-Hhh
Confidence 3699999999875521 1 11111111111 134555543 222 235699999999 8887 43
Q ss_pred CCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC-----CEEE--ecCchhHHH-HHHHHhCCeEEEE
Q 012838 96 LGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLV--TCGGCQSAH-ATAVERGLKSHLL 167 (455)
Q Consensus 96 ~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~-----~~VV--t~G~~~sNh-a~Aa~~Gl~~~iv 167 (455)
+| -.+||+|+|.+| | +||||||.+.+++..|++.|. .+|| |+||++.+. ++|+.+|++|+||
T Consensus 147 ~G--------~~~l~~K~E~~n-P-TGSFKDRga~~~vs~a~~~g~~~~~~~~Vv~ASSGN~GaAlAayaa~~Gl~~~I~ 216 (484)
T PLN02569 147 LG--------MNDLWVKHCGIS-H-TGSFKDLGMTVLVSQVNRLRKMAKPVVGVGCASTGDTSAALSAYCAAAGIPSIVF 216 (484)
T ss_pred cC--------CccEEEEECCCC-C-CcCHHHHHHHHHHHHHHHhhhccCCccEEEEeCCcHHHHHHHHHHHhcCCeEEEE
Confidence 32 148999999997 8 899999999999999988776 5677 356665333 3688999999999
Q ss_pred ecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccc
Q 012838 168 LRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHK 246 (455)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
||...+. ..++.+++.||| |+.|+++ |++..... +++
T Consensus 217 vP~~~~~--~~k~~qi~a~GA~Vi~v~g~-~d~a~~~a----~e~----------------------------------- 254 (484)
T PLN02569 217 LPADKIS--IAQLVQPIANGALVLSIDTD-FDGCMRLI----REV----------------------------------- 254 (484)
T ss_pred EcCCCCC--HHHHHHHHhcCCEEEEECCC-HHHHHHHH----HHH-----------------------------------
Confidence 9986322 135567899999 9999874 66533322 111
Q ss_pred cccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc---C---CCceEEE
Q 012838 247 GIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL---G---LPWEVTA 320 (455)
Q Consensus 247 ~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~---g---~~~~vig 320 (455)
.++. ..|.++. . ||..++|++|+++||++|+ +|..||+||+|+|+||+++|++++|+++ | ..+||++
T Consensus 255 --~~~~-~~~~~n~-~-Np~~ieG~kT~a~EI~eQl--~~~~pD~VvvPvG~Gg~l~Gi~kgfkel~~~G~i~~~Priv~ 327 (484)
T PLN02569 255 --TAEL-PIYLANS-L-NSLRLEGQKTAAIEILQQF--DWEVPDWVIVPGGNLGNIYAFYKGFKMCKELGLVDRLPRLVC 327 (484)
T ss_pred --HHHc-CCEecCC-C-CcchhHhHHHHHHHHHHHc--CCCCCCEEEEeCCchHHHHHHHHHHHHHHHcCCCCCCCeEEE
Confidence 1111 2355543 3 8999999999999999996 6546999999999999999999999975 3 4579999
Q ss_pred EeccCChhhHHHhhHh---H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhC
Q 012838 321 IALVDTIDGYKQQEKN---L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTG 392 (455)
Q Consensus 321 Ve~~g~~~~~~~~~~~---l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eG 392 (455)
||++++...+...... . ...+++.++.. .|.. ....+..+++..+..+.|+|+|+++++++ ++++|
T Consensus 328 Vqa~g~~pl~~a~~~G~~~~~~~~~~~T~A~gi~i~-~P~~----~~~~l~al~~s~g~~v~VsDeEi~~a~~~-a~~~G 401 (484)
T PLN02569 328 AQAANANPLYRAYKSGWEEFKPVKANPTFASAIQIG-DPVS----IDRAVYALKESNGIVEEATEEELMDAQAE-ADKTG 401 (484)
T ss_pred EeeCCCcHHHHHHHcCCCccccCCCCCccchhhccC-CCcc----HHHHHHHHHHhCCEEEEECHHHHHHHHHH-HHHCC
Confidence 9999975433221110 0 01112222211 1111 11233445666666799999999999999 89999
Q ss_pred CcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecC-CCcchhh
Q 012838 393 ILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTG-GTLGMFG 434 (455)
Q Consensus 393 I~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TG-G~~~~~~ 434 (455)
|++||+ ||+++||++++.+++ +.++++||+|+|| |..+...
T Consensus 402 i~veps-sAaalAal~kl~~~g~i~~~~~VV~i~Tg~GlK~~~~ 444 (484)
T PLN02569 402 MFLCPH-TGVALAALKKLRASGVIGPTDRTVVVSTAHGLKFTQS 444 (484)
T ss_pred cEECch-HHHHHHHHHHHHHcCCCCCCCcEEEEeCCCcccChhH
Confidence 999996 799999999988764 6678899999999 7776543
No 49
>PRK07409 threonine synthase; Validated
Probab=100.00 E-value=3.2e-40 Score=337.36 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=211.8
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha- 155 (455)
..|+|||+++ ++|+ +.+ |.+||+|+|++| | +||||||++.+++..+++.|.++||++++ +||+
T Consensus 28 ~~g~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGSfKdR~a~~~l~~a~~~g~~~iv~aSs--GN~g~ 91 (353)
T PRK07409 28 GEGNTPLIPA--PNLS-ELL---------GVEVYVKYEGLN-P-TGSFKDRGMTMAVTKAKEEGAKAVICAST--GNTSA 91 (353)
T ss_pred CCCCCCEEEc--hhhH-HHh---------CCeEEEEecCCC-C-ccchHHHHHHHHHHHHHHCCCCEEEEECC--cHHHH
Confidence 4599999999 8887 332 579999999997 8 89999999999999999999999996422 3444
Q ss_pred ----HHHHhCCeEEEEecCCC-ccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQ-PQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~-~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|+||||... +.. +..+++.||| |+.+++. ++++.+. ++++
T Consensus 92 alA~~a~~~G~~~~ivvP~~~~~~~---k~~~~~~~GA~Vi~~~~~-~~~~~~~----a~~l------------------ 145 (353)
T PRK07409 92 SAAAYAARAGLKAFVLIPEGKIALG---KLAQAVMYGAEIIQIDGN-FDDALEI----VREL------------------ 145 (353)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCchh---hHHHHHhcCCEEEEECCC-HHHHHHH----HHHH------------------
Confidence 46799999999999863 322 4456899999 9999864 5543222 1111
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
.+..+ .|+++ ..||..++||.++++||++|+ + ..||+||+|+||||+++|++.+|
T Consensus 146 -------------------~~~~~-~~~~~--~~n~~~~~g~~t~~~EI~~q~--~-~~~d~iv~~vG~GG~~~Gi~~g~ 200 (353)
T PRK07409 146 -------------------AEKYP-VTLVN--SVNPYRIEGQKTAAFEIVDAL--G-DAPDYHCIPVGNAGNITAYWKGY 200 (353)
T ss_pred -------------------HHhcC-ceecC--CCCchhhhhHHHHHHHHHHHh--C-CCCCEEEEeCCChHHHHHHHHHH
Confidence 11122 34443 358999999999999999996 3 36999999999999999999999
Q ss_pred HhcCC------CceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHH
Q 012838 310 ICLGL------PWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEA 383 (455)
Q Consensus 310 ~~~g~------~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a 383 (455)
++..+ .++|||||++++...+..........+++.++. + .+......+..++++.+..+.|+|+|++++
T Consensus 201 ~~~~~~~~~~~~~kvigVep~g~~~~~~g~~~~~~~ti~~~l~~---~--~~~~~~~~~~~~~~~~~~~v~Vsd~e~~~a 275 (353)
T PRK07409 201 KEYHQDGKSTKLPRMMGFQAAGAAPIVRGEPVKNPETIATAIRI---G--NPASWDKAVAARDESGGLIDAVTDEEILEA 275 (353)
T ss_pred HHHHHcCCccCCCeEEEEecCCCChHhhCCcCCCCcceeeeeec---C--CCCCHHHHHHHHHHhCCEEEEECHHHHHHH
Confidence 87532 589999999987543311100000111111111 1 000001122335566777899999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecC-CCcchhhhHHHHH
Q 012838 384 CHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTG-GTLGMFGLAQRYK 440 (455)
Q Consensus 384 ~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TG-G~~~~~~~~~ry~ 440 (455)
+++|++++||++||+ +|+++|+++++.++. +.++++||+|+|| |+.+.....+.+.
T Consensus 276 ~~~l~~~egi~v~ps-sa~alaa~~~~~~~~~~~~~~~VV~i~tg~g~k~~~~~~~~~~ 333 (353)
T PRK07409 276 YRLLARKEGVFCEPA-SAASVAGLLKAIRAGKIPEGSTVVCTLTGNGLKDPDTAIKQAD 333 (353)
T ss_pred HHHHHHhCCceeCch-HHHHHHHHHHHHHcCCCCCCCcEEEEecCccccchHHHHhhcc
Confidence 999999999999997 799999999877642 5568899999999 9999887665544
No 50
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=100.00 E-value=7.2e-40 Score=327.39 Aligned_cols=274 Identities=18% Similarity=0.098 Sum_probs=201.4
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEec--CchhH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTC--GGCQS 152 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~--G~~~s 152 (455)
++|||+++ ++ . ..+ |.+||+|+|++| | +||||+|++.+++..|++.|. ++||++ ||.+.
T Consensus 6 g~TPl~~~--~~-~-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~aSsGN~g~ 70 (298)
T TIGR01139 6 GNTPLVRL--NR-I-EGC---------NANVFVKLEGRN-P-SGSVKDRIALNMIWDAEKRGLLKPGKTIVEPTSGNTGI 70 (298)
T ss_pred CCCceEEc--cc-c-CCC---------CceEEEEEcccC-C-CCcchHHHHHHHHHHHHHcCCCCCCCEEEEeCCChhHH
Confidence 89999999 76 3 222 679999999997 8 799999999999999999997 678853 33322
Q ss_pred HHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 153 AHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 153 Nha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
..| +|.++|++|+||||+..++. +..+++.||| |+.+++. ++.. +..+ .|++
T Consensus 71 alA~~a~~~Gl~~~i~vp~~~~~~---k~~~~~~~GA~v~~~~~~-~~~~-~~~~-~a~~-------------------- 124 (298)
T TIGR01139 71 ALAMVAAARGYKLILTMPETMSIE---RRKLLKAYGAELVLTPGA-EGMK-GAIA-KAEE-------------------- 124 (298)
T ss_pred HHHHHHHHcCCeEEEEeCCccCHH---HHHHHHHcCCEEEEECCC-CCHH-HHHH-HHHH--------------------
Confidence 222 56699999999999886543 4566899999 9999864 4311 1211 1221
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHH-HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVA-LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~-~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
+.++.+.+|+++.++.||.+ ..||++++.||.+|+ ++ .||+||+|+|+||+++|++.+|
T Consensus 125 -----------------~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~--~~-~~d~vv~~vG~Gg~~~Gi~~~~ 184 (298)
T TIGR01139 125 -----------------IAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRDT--DG-KLDAFVAGVGTGGTITGVGEVL 184 (298)
T ss_pred -----------------HHHhCCCcEEcccccCCcccHHHHHHHHHHHHHHHh--CC-CCCEEEEecchhHhHHHHHHHH
Confidence 22233444656777888874 779999999999996 32 5999999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ 389 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~ 389 (455)
+++++.+||||||+.+++...... .. ....+.++.+.+ ...+.....+..+.|+|+|+++++++|++
T Consensus 185 ~~~~~~~~vi~Ve~~~~~~~~~~~-~~--~~~~~gl~~~~~----------~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 251 (298)
T TIGR01139 185 KEQKPNIKIVAVEPAESPVLSGGK-PG--PHKIQGIGAGFI----------PKNLNRSVIDEVITVSDEEAIETARRLAA 251 (298)
T ss_pred HhcCCCCEEEEEecCCCcccCCCC-CC--CCCCCCCCCCCC----------CCccChhhCCEEEEECHHHHHHHHHHHHH
Confidence 999999999999999874322111 00 000011111100 11122334567899999999999999999
Q ss_pred HhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCC
Q 012838 390 LTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGG 428 (455)
Q Consensus 390 ~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG 428 (455)
++||++||+ +|+++++++++.++ +.++++||+|+|++
T Consensus 252 ~~gi~~~ps-sga~laa~~~~~~~-~~~~~~vv~v~~d~ 288 (298)
T TIGR01139 252 EEGILVGIS-SGAAVAAALKLAKR-PEPDKLIVVILPST 288 (298)
T ss_pred hcCceEccc-HHHHHHHHHHHHHh-cCCCCEEEEEECCC
Confidence 999999997 89999999988764 44678999999984
No 51
>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions. In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.
Probab=100.00 E-value=1.2e-39 Score=334.46 Aligned_cols=304 Identities=14% Similarity=0.073 Sum_probs=210.9
Q ss_pred hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cC
Q 012838 70 KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CG 148 (455)
Q Consensus 70 ~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G 148 (455)
..+++.|++.+|||+++ ++++ +.+| +.+||+|+|++| | +||||+|.+...+..|+++|+++||+ +|
T Consensus 24 ~~~~~~~~~~~TPL~~l--~~l~-~~~g--------~~~l~~K~E~~n-p-tgS~K~R~a~~~~~~a~~~g~~~vv~~~s 90 (365)
T cd06446 24 RELYKDYVGRPTPLYRA--KRLS-EYLG--------GAKIYLKREDLN-H-TGAHKINNALGQALLAKRMGKKRVIAETG 90 (365)
T ss_pred HHHhhccCCCCCCceeh--HHHH-HhhC--------CceEEEEeccCC-C-ccchhHHHHHHHHHHHHHcCCCeEEEecC
Confidence 44555566789999999 8888 4443 579999999997 7 79999999999999899999998887 44
Q ss_pred chhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCc--hhhHHHHHHHHhhhhhcCCCCccc
Q 012838 149 GCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTH--YAHRIEMLKSYANLVAGNNGDVVW 220 (455)
Q Consensus 149 ~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~--~~~~~~~~~~~A~~la~~~g~~~w 220 (455)
+ +||+ +|+.+|++|+||||...+..+..|..+++.||| |+.++... ++. .....++..
T Consensus 91 s--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~~~~GAeV~~~~~~~~~~~~---~~~~a~~~~--------- 156 (365)
T cd06446 91 A--GQHGVATATACALFGLECEIYMGAVDVERQPLNVFRMELLGAEVVPVPSGSGTLKD---AISEAIRDW--------- 156 (365)
T ss_pred c--hHHHHHHHHHHHHhCCCeEEEEcCCccccccchHHHHHHCCCEEEEeCCCCCcHHH---HHHHHHHHH---------
Confidence 4 5565 466999999999998644333346667899999 99998531 222 111101100
Q ss_pred hhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC-CCcH---HHHHHHHHHHHHHHHHHH-cCCCCCCEEEEe
Q 012838 221 CNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG-AGDA---VALLGVFRLLQYLSQDHL-LGRKRAIKFVVD 295 (455)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g-~~np---~~~~G~~t~~~Ei~eq~~-~g~~~pD~vvvp 295 (455)
+ .+....+|++... +.+| ....|++++++||++|+. .+...||+||+|
T Consensus 157 ------------------------~---~~~~~~~y~~~~~~~~~~~~~~~~ag~~t~~~EI~~Q~~~~~~~~~D~vv~~ 209 (365)
T cd06446 157 ------------------------V---TNVEDTHYLLGSVVGPHPYPNMVRDFQSVIGEEAKKQILEKEGELPDVVIAC 209 (365)
T ss_pred ------------------------H---hccCCceEecccccCCCCchHHHHHhhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 0 0111223433211 0122 346899999999999984 111369999999
Q ss_pred CCCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhH-------HHHHH--------------HHhcccccCCCc
Q 012838 296 AGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNL-------ISEFK--------------RLFGFLLKKSSL 354 (455)
Q Consensus 296 vGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l-------~~~~~--------------~~ig~~~~~~~~ 354 (455)
+|||||++|++++|++ .++++|||||++++..........+ ..+.. .++.. ++.+
T Consensus 210 vG~GGt~~Gi~~g~~~-~~~~~vigVep~gs~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~a~---gl~~ 285 (365)
T cd06446 210 VGGGSNAAGLFYPFIN-DKDVKLIGVEAGGCGLETGGHAAYLFGGTAGVLHGLKMYTLQDEDGQIVPPHSISA---GLDY 285 (365)
T ss_pred cCccHHHHHHHHHHHh-CCCceEEEEcCCCCccccccceeeccCCCcceecchhhhccccccCCCCCcccccc---cccC
Confidence 9999999999999986 5689999999998654321100000 00000 00000 0111
Q ss_pred CccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchh
Q 012838 355 NEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMF 433 (455)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~ 433 (455)
+.+.+..+.+.+++.++.+.|+|+|+++++++|+++|||++|| |||+++|+++++.++. +++++||+|+|| |+.++.
T Consensus 286 ~~~~~~~~~~~~~~~d~~v~V~d~e~~~a~r~la~~eGi~~ep-ssgaalAa~~~~~~~~-~~~~~Vv~i~~g~G~k~~~ 363 (365)
T cd06446 286 PGVGPEHAYLKDSGRVEYVAVTDEEALEAFKLLARTEGIIPAL-ESSHAIAYAIKLAKKL-GKEKVIVVNLSGRGDKDLQ 363 (365)
T ss_pred CCCCHHHHHHHHhCCceEEEeChHHHHHHHHHHHHhcCceeCc-cchHHHHHHHHHHHhc-CCCCeEEEEeCCCCccccc
Confidence 1112223335566778899999999999999999999999999 6899999999987653 568899999999 988754
No 52
>PRK06721 threonine synthase; Reviewed
Probab=100.00 E-value=1e-39 Score=333.47 Aligned_cols=285 Identities=13% Similarity=0.079 Sum_probs=204.0
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha- 155 (455)
..|+|||+++ ++++ +.+ |.+||+|+|++| | +||||+|++.+++.+|+++|.++||++++ +||+
T Consensus 25 ~~G~TPl~~l--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~KdR~a~~~i~~a~~~g~~~vV~aSs--GN~G~ 88 (352)
T PRK06721 25 MEGNTPLIPL--LNIS-KQL---------GIQLYGKYEGAN-P-TGSFKDRGMVMAVAKAKEEGSEAIICAST--GNTSA 88 (352)
T ss_pred CcCCCCeeEc--hhhH-HHh---------CCeEEEEecCCC-C-ccchHHHHHHHHHHHHHHCCCCEEEEECC--cHHHH
Confidence 3599999999 8887 433 579999999997 8 79999999999999999999999996422 4444
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|+.+|++|+||||...+ +..+..+++.||| |+.++++ +++..+. |+++
T Consensus 89 alA~~aa~~G~~~~vvvp~~~~--~~~k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~~------------------- 142 (352)
T PRK06721 89 SAAAYAARLGMKCIIVIPEGKI--AHGKLAQAVAYGAEIISIEGN-FDDALKA----VRNI------------------- 142 (352)
T ss_pred HHHHHHHHCCCcEEEEECCCCC--CHHHHHHHHHcCCEEEEECCC-HHHHHHH----HHHH-------------------
Confidence 567999999999998641 1235567899999 9999864 5542222 1111
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH-
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA- 309 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~- 309 (455)
.+..+ .|++ +..||...+||.++++||++|+ + ..||+||+|+||||+++|++.++
T Consensus 143 ------------------~~~~~-~~~~--~~~n~~~~~G~~t~~~Ei~eq~--~-~~~D~ivv~vG~GG~l~G~~~G~~ 198 (352)
T PRK06721 143 ------------------AAEEP-ITLV--NSVNPYRIEGQKTAAFEICDQL--Q-RAPDVLAIPVGNAGNITAYWKGFC 198 (352)
T ss_pred ------------------HHhCC-ceec--cCCCchhhhhhhhHHHHHHHHh--C-CCCCEEEEeCCchHHHHHHHHHHH
Confidence 11111 2333 3458888999999999999996 3 36999999999999999876665
Q ss_pred ---HhcC-CCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 310 ---ICLG-LPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 310 ---~~~g-~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
++.+ +.++|||||++++..............+++.++. + .+......+...+.+.+..+.|+|+|++++++
T Consensus 199 ~~lk~~~~~~~~vigVep~~~~~~~~g~~~~~~~tia~~l~~---~--~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~ 273 (352)
T PRK06721 199 EYEKEKGYKKPRIHGFEAEGAAAIVKGHVIDEPETIATAIRI---G--NPASWSYAVEAAEQSHGEIDMVSDEEILHAYR 273 (352)
T ss_pred HHHHhcCCCCCeEEEEecCCCChHhhCCcCCCCCceeecccc---C--CCCCHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 4445 8899999999987543221100000011111111 1 00000011223456788899999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhh-cCCCCCeEEEEecCCC-cchh
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDE-KLKQDADVVMLHTGGT-LGMF 433 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~-~~~~g~~VV~I~TGG~-~~~~ 433 (455)
+|+++|||++||+ +|+++|+++++.++ .+.++++||+|+||+. .++.
T Consensus 274 ~la~~eGi~veps-sgaalaa~~~~~~~~~~~~~~~Vv~v~~g~g~k~~~ 322 (352)
T PRK06721 274 LLAKSEGVFAEPG-SNASLAGVMKHVQSGKIKKGETVVAVLTGNGLKDPD 322 (352)
T ss_pred HHHHhcCcccCch-HHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCcCchH
Confidence 9999999999997 58999999998765 3566889999999955 4443
No 53
>PRK07334 threonine dehydratase; Provisional
Probab=100.00 E-value=1.3e-39 Score=338.42 Aligned_cols=286 Identities=14% Similarity=0.072 Sum_probs=211.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha-- 155 (455)
++|||+++ ++++ +.+ |.+||+|+|++| | +||||||.+.+++.++. +.+.++||++++ +||+
T Consensus 22 ~~TPl~~~--~~l~-~~~---------g~~l~~K~E~~n-p-tGS~KdR~a~~~i~~~~~~~~~~~vv~aSs--GN~g~a 85 (403)
T PRK07334 22 LRTPCVHS--RTLS-QIT---------GAEVWLKFENLQ-F-TASFKERGALNKLLLLTEEERARGVIAMSA--GNHAQG 85 (403)
T ss_pred CCCCccch--HHHH-Hhh---------CCeEEEEeccCC-C-CCCchHHHHHHHHHhcCHHHhCCcEEEECC--cHHHHH
Confidence 89999999 8887 433 579999999997 8 89999999999988754 345566885332 3444
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...++ .+..+++.||| |+.++.. +++..+. |+++
T Consensus 86 lA~~a~~~G~~~~iv~p~~~~~---~k~~~~~~~GA~v~~~~~~-~~~~~~~----a~~l-------------------- 137 (403)
T PRK07334 86 VAYHAQRLGIPATIVMPRFTPT---VKVERTRGFGAEVVLHGET-LDEARAH----AREL-------------------- 137 (403)
T ss_pred HHHHHHHcCCCEEEEECCCCCH---HHHHHHHHcCCEEEEECcC-HHHHHHH----HHHH--------------------
Confidence 5779999999999998654 35567899999 9988753 5432221 2211
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.... +.|++ .++.||...+||.+++.||++|+ +.||+||+|+|||||++|++++|++
T Consensus 138 -----------------~~~~-~~~~~-~~~~~~~~~~g~~t~~~Ei~~q~----~~~d~vv~~vG~GG~~~Gi~~~lk~ 194 (403)
T PRK07334 138 -----------------AEEE-GLTFV-HPYDDPAVIAGQGTVALEMLEDA----PDLDTLVVPIGGGGLISGMATAAKA 194 (403)
T ss_pred -----------------HHhc-CCEec-CCCCCHHHHHhHHHHHHHHHhcC----CCCCEEEEecCHHHHHHHHHHHHHH
Confidence 1222 22333 34568899999999999999996 3699999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHhHH----HHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKNLI----SEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~l~----~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
+++.++|+|||+++++..+........ ..+++.++ .+.+....+.+.+.+.+..+.|+|+|+++++++|
T Consensus 195 ~~~~~~vi~ve~~~~~~~~~~~~~~~~~~~~~~~~~gi~-------~~~~~~~~~~~~~~~~d~~v~V~d~e~~~a~~~l 267 (403)
T PRK07334 195 LKPDIEIIGVQTELYPSMYAAIKGVALPCGGSTIAEGIA-------VKQPGQLTLEIVRRLVDDILLVSEADIEQAVSLL 267 (403)
T ss_pred hCCCCEEEEEEECCCchHHHHHhCCCccCCCCCccceec-------CCCccHHHHHHHHHhCCeEEEECHHHHHHHHHHH
Confidence 999999999999997654432110000 01111111 1111223345566788899999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
++++|+++||+ +|+++|+++++.+. .++++||+|+||||.+...+.+-+..
T Consensus 268 ~~~~gi~v~~s-~a~~~aa~~~~~~~--~~~~~vv~i~~ggn~d~~~l~~il~~ 318 (403)
T PRK07334 268 LEIEKTVVEGA-GAAGLAALLAYPER--FRGRKVGLVLSGGNIDTRLLANVLLR 318 (403)
T ss_pred HHhcCCEEech-HHHHHHHHHhCchh--cCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 99999999995 78999999876543 35889999999999998877654444
No 54
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=100.00 E-value=6.4e-40 Score=331.35 Aligned_cols=281 Identities=17% Similarity=0.175 Sum_probs=206.8
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA- 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha- 155 (455)
..|+|||+++ ++|+ ..+| +.+||+|+|++| | +||||+|++.+++..|++.|.++||++++ +||+
T Consensus 19 ~~g~TPl~~~--~~l~-~~~g--------~~~i~~K~E~~n-p-tGS~K~R~a~~~l~~a~~~g~~~vv~~Ss--GN~g~ 83 (324)
T cd01563 19 GEGNTPLVRA--PRLG-ERLG--------GKNLYVKDEGLN-P-TGSFKDRGMTVAVSKAKELGVKAVACAST--GNTSA 83 (324)
T ss_pred CCCCCceeec--hhhH-hhcC--------CCceEEEecCCC-C-cccHHHhhHHHHHHHHHHcCCCEEEEeCC--CHHHH
Confidence 3499999999 8888 4332 479999999996 8 89999999999999999999999996422 3454
Q ss_pred ----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 156 ----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 156 ----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
+|..+|++|+||||...+. .+..+++.+|| |+.++.+ +++..+. +++
T Consensus 84 alA~~a~~~G~~~~ivvp~~~~~---~k~~~l~~~GA~Vi~~~~~-~~~~~~~----a~~-------------------- 135 (324)
T cd01563 84 SLAAYAARAGIKCVVFLPAGKAL---GKLAQALAYGATVLAVEGN-FDDALRL----VRE-------------------- 135 (324)
T ss_pred HHHHHHHHcCCceEEEEeCCCCH---HHHHHHHHcCCEEEEECCc-HHHHHHH----HHH--------------------
Confidence 4669999999999988643 35566899999 9998864 5432221 111
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
+.+.. ..|+ .++.||...+||.+++.||.+|+ ++..||+||+|+|||||++|++.+|+
T Consensus 136 -----------------~~~~~-~~~~--~~~~n~~~~~g~~t~~~Ei~~q~--~~~~~d~vv~~vGtGg~~~G~~~~~k 193 (324)
T cd01563 136 -----------------LAEEN-WIYL--SNSLNPYRLEGQKTIAFEIAEQL--GWEVPDYVVVPVGNGGNITAIWKGFK 193 (324)
T ss_pred -----------------HHHhc-Ceec--cCCCCcceecchhhhHHHHHHHc--CCCCCCEEEEecCCcHHHHHHHHHHH
Confidence 11112 3343 34578888899999999999997 22369999999999999999999999
Q ss_pred hcC------CCceEEEEeccCChhhHHHhhH---hH-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeC
Q 012838 311 CLG------LPWEVTAIALVDTIDGYKQQEK---NL-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNV 376 (455)
Q Consensus 311 ~~g------~~~~vigVe~~g~~~~~~~~~~---~l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 376 (455)
.+. +.++|||||+.++...+..... .. ...+++.++. + .+......+.+++++.++.+.|+
T Consensus 194 ~~~~~g~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~t~~~gl~~---~--~~~~~~~~~~~~~~~~~~~~~V~ 268 (324)
T cd01563 194 ELKELGLIDRLPRMVGVQAEGAAPIVRAFKEGKDDIEPVENPETIATAIRI---G--NPASGPKALRAVRESGGTAVAVS 268 (324)
T ss_pred HHHhCCccccCCeEEEEecCCCCHHHHHHHcCCCccCcCCCCCceeeeeec---C--CCCCHHHHHHHHHHhCCEEEEEC
Confidence 764 5799999999986543322110 00 0011111110 0 00001123455667778899999
Q ss_pred CHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCC
Q 012838 377 FEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGG 428 (455)
Q Consensus 377 d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG 428 (455)
|+|++++++++++++||++||+ ||+++++++++.++. +.++++||+||||+
T Consensus 269 d~e~~~a~~~l~~~~gi~~~ps-sa~alaa~~~l~~~~~~~~~~~Vv~v~tg~ 320 (324)
T cd01563 269 DEEILEAQKLLARTEGIFVEPA-SAASLAGLKKLREEGIIDKGERVVVVLTGH 320 (324)
T ss_pred HHHHHHHHHHHHhcCCceeCch-HHHHHHHHHHHHHcCCCCCCCcEEEEeCCC
Confidence 9999999999999999999997 899999999987653 55688999999994
No 55
>PRK08246 threonine dehydratase; Provisional
Probab=100.00 E-value=4.1e-39 Score=323.67 Aligned_cols=281 Identities=14% Similarity=0.010 Sum_probs=202.9
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhHHHH---
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHA--- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~sNha--- 155 (455)
++|||+++ ++++ . . +.+||+|+|++| | +||||+|.+.+++..+.+ +.++||++++ +||+
T Consensus 22 ~~TPl~~~--~~l~-~---------~-~~~i~~K~E~~n-p-tGS~K~R~a~~~~~~~~~-~~~~vv~aSs--GN~g~a~ 83 (310)
T PRK08246 22 RRTPVLEA--DGAG-F---------G-PAPVWLKLEHLQ-H-TGSFKARGAFNRLLAAPV-PAAGVVAASG--GNAGLAV 83 (310)
T ss_pred CCCCeeec--cccc-c---------C-CCEEEEEECCCC-C-CCCCHHHHHHHHHHhhcc-cCCeEEEeCC--CHHHHHH
Confidence 89999999 8877 2 1 479999999997 8 899999999888888766 5677885322 3444
Q ss_pred --HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhh
Q 012838 156 --TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQ 232 (455)
Q Consensus 156 --~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~ 232 (455)
+|+.+|++|+||||...++. ++.+++.||+ |+.++.. +++..+. ++++
T Consensus 84 A~~a~~~G~~~~iv~p~~~~~~---k~~~~~~~GA~V~~~~~~-~~~~~~~----a~~~--------------------- 134 (310)
T PRK08246 84 AYAAAALGVPATVFVPETAPPA---KVARLRALGAEVVVVGAE-YADALEA----AQAF--------------------- 134 (310)
T ss_pred HHHHHHcCCCEEEEECCCCcHH---HHHHHHHCCCEEEEeCCC-HHHHHHH----HHHH---------------------
Confidence 56799999999999876533 5567899999 9998863 5432211 1111
Q ss_pred hhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc
Q 012838 233 KSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL 312 (455)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~ 312 (455)
.... ..|+ +.++.||....||.++++||++|+ +.||+||+|+|+|||++|++.+|+.
T Consensus 135 ----------------~~~~-g~~~-~~~~~n~~~i~g~~t~~~Ei~eq~----~~~D~iv~~vG~GG~~~Gi~~~~~~- 191 (310)
T PRK08246 135 ----------------AAET-GALL-CHAYDQPEVLAGAGTLGLEIEEQA----PGVDTVLVAVGGGGLIAGIAAWFEG- 191 (310)
T ss_pred ----------------HHhc-CCEe-CCCCCChhhhcchHHHHHHHHHhc----CCCCEEEEecCccHHHHHHHHHhcC-
Confidence 1111 2233 355678888999999999999996 3699999999999999999999973
Q ss_pred CCCceEEEEeccCChhhHHHhhHh-HHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHh
Q 012838 313 GLPWEVTAIALVDTIDGYKQQEKN-LISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT 391 (455)
Q Consensus 313 g~~~~vigVe~~g~~~~~~~~~~~-l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~e 391 (455)
.++|+|||++++...+.+.... ....-...+..+ .+..+.++...+.+.+++.+..+.|+|+|+++++++|++++
T Consensus 192 --~~~vi~ve~~~~~~~~~s~~~g~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~e 267 (310)
T PRK08246 192 --RARVVAVEPEGAPTLHAALAAGEPVDVPVSGIAAD--SLGARRVGEIAFALARAHVVTSVLVSDEAIIAARRALWEEL 267 (310)
T ss_pred --CCEEEEEeeCCChHHHHHHHcCCcccCCCCCceec--cccCCCccHHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHc
Confidence 4999999999986544321110 000000000000 01111122344566778889999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhh
Q 012838 392 GILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGL 435 (455)
Q Consensus 392 GI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~ 435 (455)
||++||+ +|+++|++++... ...++++||+|+||||.|...+
T Consensus 268 gi~~e~s-~aa~lAa~~~~~~-~~~~~~~vv~i~~g~n~d~~~~ 309 (310)
T PRK08246 268 RLAVEPG-AATALAALLSGAY-VPAPGERVAVVLCGANTDPATL 309 (310)
T ss_pred CceeehH-HHHHHHHHHhCCc-cccCCCeEEEEECCCCCChhhc
Confidence 9999996 7899999876432 2346889999999999987653
No 56
>PLN00011 cysteine synthase
Probab=100.00 E-value=6.1e-39 Score=324.19 Aligned_cols=280 Identities=16% Similarity=0.079 Sum_probs=202.0
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC-----CCEEEecCchhH
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI-----VTDLVTCGGCQS 152 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G-----~~~VVt~G~~~s 152 (455)
.++|||+++ ++++ +.+ |.+||+|+|++| | +||||+|++.+++..|++.| .++||++++ +
T Consensus 15 ~g~TPl~~l--~~l~-~~~---------g~~i~~K~E~~n-P-tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~aSs--G 78 (323)
T PLN00011 15 IGNTPMVYL--NNIV-DGC---------VARIAAKLEMME-P-CSSVKDRIAYSMIKDAEDKGLITPGKSTLIEATA--G 78 (323)
T ss_pred hCCCceEEc--cccC-CCC---------CceEEEEecccC-C-ccccchHHHHHHHHHHHHcCCCCCCCcEEEEeCC--C
Confidence 399999999 8877 321 479999999996 8 89999999999999999998 578986422 4
Q ss_pred HHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhH
Q 012838 153 AHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFE 226 (455)
Q Consensus 153 Nha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~ 226 (455)
||+ +|+.+|++|+||||...++ .+..+++.||| |+.++.. +... +..+. |++
T Consensus 79 N~g~alA~~a~~~G~~~~ivvp~~~~~---~k~~~i~~~GA~V~~~~~~-~~~~-~~~~~-a~~---------------- 136 (323)
T PLN00011 79 NTGIGLACIGAARGYKVILVMPSTMSL---ERRIILRALGAEVHLTDQS-IGLK-GMLEK-AEE---------------- 136 (323)
T ss_pred hHHHHHHHHHHHcCCeEEEEeCCCCCH---HHHHHHHHcCCEEEEECCC-cChH-HHHHH-HHH----------------
Confidence 555 4669999999999988653 36677899999 9998864 3211 11111 111
Q ss_pred HHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHH-HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHH
Q 012838 227 ASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVA-LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGL 305 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~-~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl 305 (455)
+....++ |+++.++.||.. ..||.+++.||++|+ + ..||+||+|+|||||++|+
T Consensus 137 ---------------------l~~~~~~-~~~~~~~~n~~n~~~~~~t~~~EI~~q~--~-~~~D~iv~~vGtGGt~aGi 191 (323)
T PLN00011 137 ---------------------ILSKTPG-GYIPQQFENPANPEIHYRTTGPEIWRDS--A-GKVDILVAGVGTGGTATGV 191 (323)
T ss_pred ---------------------HHHhCCC-eEEeccccCCccHHHHHHHHHHHHHHhc--C-CCCCEEEEeCCchHHHHHH
Confidence 1122233 345566555432 347999999999996 3 2699999999999999999
Q ss_pred HHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 306 GLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 306 ~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
+++|++++++++|||||++++....... . ...+.+.++.+ .++ ..+.....++.+.|+|+|++++|+
T Consensus 192 ~~~lk~~~~~~kvigVe~~~~~~~~~~~-~--~~~~~~gl~~~-------~~~---~~~~~~~~d~~v~V~d~e~~~a~~ 258 (323)
T PLN00011 192 GKFLKEKNKDIKVCVVEPVESAVLSGGQ-P--GPHLIQGIGSG-------IIP---FNLDLTIVDEIIQVTGEEAIETAK 258 (323)
T ss_pred HHHHHhhCCCCEEEEEecCCCcccCCCC-C--CCCCCCCCCCC-------CCC---cccChhhCCeEEEECHHHHHHHHH
Confidence 9999999999999999999875421110 0 00111111211 111 112233456688999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEe-cCCCcchhh
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLH-TGGTLGMFG 434 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~-TGG~~~~~~ 434 (455)
+|++++||++||+ +|++++++++++++...++++||+|+ +||+....+
T Consensus 259 ~l~~~~Gi~~~~s-sga~laaa~~~~~~~~~~~~~vv~i~~d~G~ky~~~ 307 (323)
T PLN00011 259 LLALKEGLLVGIS-SGAAAAAALKVAKRPENAGKLIVVIFPSGGERYLST 307 (323)
T ss_pred HHHHhcCCeEccc-HHHHHHHHHHHHHhccCCCCeEEEEECCCccccCCh
Confidence 9999999999996 78999999988764323577888888 778887664
No 57
>PRK08813 threonine dehydratase; Provisional
Probab=100.00 E-value=2.1e-38 Score=321.48 Aligned_cols=272 Identities=13% Similarity=0.040 Sum_probs=202.6
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCC-EEEecCchhHHHH--
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVT-DLVTCGGCQSAHA-- 155 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~-~VVt~G~~~sNha-- 155 (455)
++|||+++ +.+ +||+|+|++| | +||||+|.+.+++..+.+.+.. .||++++ +||+
T Consensus 38 ~~TPL~~~--~~l----------------~v~lK~E~~n-p-tGSfK~RgA~~~l~~a~~~~~~~~VV~aSs--GN~G~a 95 (349)
T PRK08813 38 SPTPLHYA--ERF----------------GVWLKLENLQ-R-TGSYKVRGALNALLAGLERGDERPVICASA--GNHAQG 95 (349)
T ss_pred CCCCeEEC--CCC----------------cEEEEecCCC-C-cCCCHHHHHHHHHHHHHHcCCCCeEEEECC--CHHHHH
Confidence 79999987 332 3999999997 8 8999999999999999988874 6775433 3444
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|+.+|++|+||||...+.. +..+++.||| |+.++. .|++..+. |+++
T Consensus 96 lA~aa~~~Gi~~~IvvP~~~~~~---K~~~i~~~GAeVv~~g~-~~~~a~~~----a~~l-------------------- 147 (349)
T PRK08813 96 VAWSAYRLGVQAITVMPHGAPQT---KIAGVAHWGATVRQHGN-SYDEAYAF----AREL-------------------- 147 (349)
T ss_pred HHHHHHHcCCCEEEEEcCCCCHH---HHHHHHHcCCEEEEECC-CHHHHHHH----HHHH--------------------
Confidence 56799999999999986643 4456899999 998876 36643222 2221
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.+.. +.|+++ ++.||..++|++|+++||++| .||+||+|+|+||+++|++++|++
T Consensus 148 -----------------a~~~-g~~~v~-~~~np~~i~G~~Tig~EI~e~------~pD~VvvpvGgGGliaGia~~lk~ 202 (349)
T PRK08813 148 -----------------ADQN-GYRFLS-AFDDPDVIAGQGTVGIELAAH------APDVVIVPIGGGGLASGVALALKS 202 (349)
T ss_pred -----------------HHhc-CCEEcC-ccCChHHHHHHHHHHHHHHcC------CCCEEEEEeCccHHHHHHHHHHhc
Confidence 1111 334443 456899999999999999987 489999999999999999999995
Q ss_pred cCCCceEEEEeccCChhhHHHhhHhH-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKNL-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
+.++|||||++++.....+..... ...+++.++ ...+....+.+..++.++.+.|+|+|+.+++++
T Consensus 203 --~~~rVigVqpega~~~~~s~~g~~~~~~~~~tiadgl~-------~~~p~~~~~~i~~~~vd~vv~Vsd~ei~~a~~~ 273 (349)
T PRK08813 203 --QGVRVVGAQVEGVDSMARAIRGDLREIAPVATLADGVK-------VKIPGFLTRRLCSSLLDDVVIVREAELRETLVR 273 (349)
T ss_pred --CCCEEEEEEECCCchHHHHHcCCCcccCCCCceecccc-------cCCcchhHHHHHHHhCCeEEEECHHHHHHHHHH
Confidence 469999999999765433211000 011111111 111223345566778899999999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
|++++|+++||+ +|+++|+++++ ++++|++|+||||.|...+..-+..
T Consensus 274 l~~~~gl~vE~a-ga~alAa~~~~------~~~~v~~vlsGgN~d~~~~~~~~~~ 321 (349)
T PRK08813 274 LALEEHVIAEGA-GALALAAGRRV------SGKRKCAVVSGGNIDATVLATLLSE 321 (349)
T ss_pred HHHHcCcEEEEc-HHHHHHHHHHh------CCCCEEEEECCCCCCHHHHHHHHHh
Confidence 999999999996 78999998652 3679999999999998887655543
No 58
>PRK08206 diaminopropionate ammonia-lyase; Provisional
Probab=100.00 E-value=6.6e-39 Score=332.15 Aligned_cols=294 Identities=13% Similarity=0.040 Sum_probs=206.5
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH--hCCCC--------------
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE--DHIVT-------------- 142 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~--~~G~~-------------- 142 (455)
++|||+++ ++|+ +.+| ..+||+|+|++++| +||||+|+..+.+..+. +.+.+
T Consensus 43 ~~TPL~~~--~~l~-~~~G--------~~~v~~K~E~~q~p-tgSFK~RG~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 110 (399)
T PRK08206 43 APTPLVAL--PDLA-AELG--------VGSILVKDESYRFG-LNAFKALGGAYAVARLLAEKLGLDISELSFEELTSGEV 110 (399)
T ss_pred CCCCCcch--HHHH-HHhC--------CCcEEEecccCcCC-CCChHHhhHHHHHHHHHHHHhCCCcccCCHHHhhhhHH
Confidence 79999999 8888 4442 25999999998658 89999999888777754 33331
Q ss_pred -------EEEecCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhh
Q 012838 143 -------DLVTCGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYAN 209 (455)
Q Consensus 143 -------~VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~ 209 (455)
+||++++ +||+ +|+.+|++|+||||...+.. +...++.||| |+.|+.. +++..+. |.
T Consensus 111 ~~~~~~~~vv~aSs--GN~g~alA~~a~~~G~~~~Ivvp~~~~~~---k~~~i~~~GA~Vi~v~~~-~~~~~~~----a~ 180 (399)
T PRK08206 111 REKLGDITFATATD--GNHGRGVAWAAQQLGQKAVIYMPKGSSEE---RVDAIRALGAECIITDGN-YDDSVRL----AA 180 (399)
T ss_pred HHhccCCEEEEeCC--cHHHHHHHHHHHHcCCCEEEEECCCCCHH---HHHHHHHcCCEEEEeCCC-HHHHHHH----HH
Confidence 3664322 4444 56799999999999886543 3445899999 9999864 5543222 11
Q ss_pred hhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecC----CCC--cHHHHHHHHHHHHHHHHHHH
Q 012838 210 LVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNE----GAG--DAVALLGVFRLLQYLSQDHL 283 (455)
Q Consensus 210 ~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~----g~~--np~~~~G~~t~~~Ei~eq~~ 283 (455)
++++ .. ..|+++. ++. +|...+||.|+++||++|+.
T Consensus 181 ~~~~-------------------------------------~~-g~~~v~~~~~~~~~~~~~~~~~G~~t~a~EI~eQl~ 222 (399)
T PRK08206 181 QEAQ-------------------------------------EN-GWVVVQDTAWEGYEEIPTWIMQGYGTMADEAVEQLK 222 (399)
T ss_pred HHHH-------------------------------------Hc-CCEEecCccccCcccccHHHHHHhHHHHHHHHHHHH
Confidence 1111 11 2233321 233 37789999999999999973
Q ss_pred -cCCCCCCEEEEeCCCcchHHHHHHHHHhcC--CCceEEEEeccCChhhHHHhhHh---HHHHHHHHhcccccCCCcCcc
Q 012838 284 -LGRKRAIKFVVDAGTGTTAVGLGLGAICLG--LPWEVTAIALVDTIDGYKQQEKN---LISEFKRLFGFLLKKSSLNEV 357 (455)
Q Consensus 284 -~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g--~~~~vigVe~~g~~~~~~~~~~~---l~~~~~~~ig~~~~~~~~~~~ 357 (455)
.+ ..||+||+|+|+|||++|++.+|+++. +.++|+|||++++...+.+.... .+.+...+++.+ +....+
T Consensus 223 ~~~-~~pD~vvvpvG~GG~~aGi~~~~k~~~~~~~~kii~Vep~gs~~l~~s~~~g~~~~~~~~~~tia~g---l~~~~~ 298 (399)
T PRK08206 223 EMG-VPPTHVFLQAGVGSLAGAVLGYFAEVYGEQRPHFVVVEPDQADCLYQSAVDGKPVAVTGDMDTIMAG---LACGEP 298 (399)
T ss_pred hcC-CCCCEEEEcCCccHHHHHHHHHHHHHcCCCCCEEEEECCCCCchHHHHHHcCCcEEeCCCCCceecc---CCCCCc
Confidence 11 259999999999999999999999873 47999999999986544322110 001000112211 111222
Q ss_pred ccccchheeeccCcEEEeCCHHHHHHHHHHHH----HhCCcccccchHHHHHHHHHHhhh----------cCCCCCeEEE
Q 012838 358 DGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ----LTGILVDPVYTLAAWEMATLLSDE----------KLKQDADVVM 423 (455)
Q Consensus 358 ~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~----~eGI~veP~ysgaalAgl~~l~~~----------~~~~g~~VV~ 423 (455)
....+.++++..++.+.|+|+|+++++++|++ ++||++||+ +|+++|+++++.++ .+.++++||+
T Consensus 299 ~~~~~~~~~~~~d~~v~VsD~ei~~a~r~La~~~~~~~gi~veps-gAa~lAa~~~~~~~~~~~~~~~~~~i~~~~~Vv~ 377 (399)
T PRK08206 299 NPLAWEILRNCADAFISCPDEVAALGMRILANPLGGDPPIVSGES-GAVGLGALAALMTDPDYQELREKLGLDEDSRVLL 377 (399)
T ss_pred CHHHHHHHHHhCCEEEEECHHHHHHHHHHHhcccCCCCCeeecch-HHHHHHHHHHHHhcchhhHHHHhcCCCCCCEEEE
Confidence 23455667788899999999999999999996 789999996 78999999876421 2456899999
Q ss_pred EecCCCcchhhhHH
Q 012838 424 LHTGGTLGMFGLAQ 437 (455)
Q Consensus 424 I~TGG~~~~~~~~~ 437 (455)
|+||||.+...+.+
T Consensus 378 iltgG~~d~~~~~~ 391 (399)
T PRK08206 378 ISTEGDTDPDRYRE 391 (399)
T ss_pred EECCCCCCHHHHHH
Confidence 99999999776544
No 59
>PRK02991 D-serine dehydratase; Provisional
Probab=100.00 E-value=1.8e-38 Score=331.15 Aligned_cols=305 Identities=14% Similarity=0.067 Sum_probs=217.8
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHH-----HHhCCC-----------
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL-----LEDHIV----------- 141 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~-----A~~~G~----------- 141 (455)
.++|||+++ ++++ +.+|... ....+.+||+|+|++| |.+||||+|.+.+++.. +++.|.
T Consensus 73 ~~~TPL~~~--~~l~-~~~g~~~-~~~~~~~V~lK~E~~n-p~tGSFK~RGA~~~i~~l~~~~a~~~G~~~~~~~~~~l~ 147 (441)
T PRK02991 73 IIESPLVAI--PAMQ-KALEKEY-GQPISGRLLLKKDSHL-PISGSIKARGGIYEVLKHAEKLALEAGLLTLDDDYSKLA 147 (441)
T ss_pred ccCCCceeh--HHHH-HHhcccc-cCCcCceEEEEEcCCC-CCcCChHHHHHHHHHHHhhHHHHHHhCCCCcCcchhhhc
Confidence 589999999 8887 4442000 0000269999999997 75799999999877764 456663
Q ss_pred ----------CEEEecCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHH
Q 012838 142 ----------TDLVTCGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLK 205 (455)
Q Consensus 142 ----------~~VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~ 205 (455)
++||++++ +||+ +|..+|++|+||||...|.. +...++.||| |+.++.+ |++..+.
T Consensus 148 ~~~~~~~~~~~~VV~aSs--GN~G~alA~aA~~~G~~~tIvvP~~a~~~---K~~~ir~~GAeVi~~~~~-~~~a~~~-- 219 (441)
T PRK02991 148 SPEFRQFFSQYSIAVGST--GNLGLSIGIMSAALGFKVTVHMSADARQW---KKDKLRSHGVTVVEYEGD-YGVAVEE-- 219 (441)
T ss_pred chhhhhhccCcEEEEECC--cHHHHHHHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEECCC-HHHHHHH--
Confidence 36886433 3555 46699999999999987654 4456899999 9998864 6643322
Q ss_pred HHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHH-c
Q 012838 206 SYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHL-L 284 (455)
Q Consensus 206 ~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~-~ 284 (455)
|+++ .+..+..|+++. ..+|..++||.|++.||++|+. .
T Consensus 220 --A~~l-------------------------------------a~~~~~~~~~~~-~~~~~~iaG~~Tig~EI~eQl~~~ 259 (441)
T PRK02991 220 --GRKA-------------------------------------AESDPNCYFIDD-ENSRTLFLGYAVAGLRLKAQLAEQ 259 (441)
T ss_pred --HHHH-------------------------------------HHhcCCeEeCCC-CCchhHHHhHHHHHHHHHHHhhhc
Confidence 2211 112223455443 4567888999999999999973 1
Q ss_pred CC----CCCCEEEEeCCCcchHHHHHHHHHhc-CCCceEEEEeccCChhhHHHhhHh----H--------HHHHHHHhcc
Q 012838 285 GR----KRAIKFVVDAGTGTTAVGLGLGAICL-GLPWEVTAIALVDTIDGYKQQEKN----L--------ISEFKRLFGF 347 (455)
Q Consensus 285 g~----~~pD~vvvpvGtGgt~~Gl~~g~~~~-g~~~~vigVe~~g~~~~~~~~~~~----l--------~~~~~~~ig~ 347 (455)
++ +.||+||+|+|+||+++|++++|+++ .+.++|||||++++...+.+.... + ...+++.++.
T Consensus 260 ~~~vD~~~Pd~VvvpvGgGGliaGia~~lk~~~~~~~kVigVEp~ga~~~~~s~~~G~~~~~~~~~~g~~~~Tiadgl~~ 339 (441)
T PRK02991 260 GIVVDADHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGLMTGLHDQISVQDIGIDNLTAADGLAV 339 (441)
T ss_pred cCccccCCCCEEEEEeCccHHHHHHHHHHHHhcCCCCEEEEEecCCChHHHHHHhcCCCcceeccccCCCCcchhhhhcC
Confidence 11 13789999999999999999999987 688999999999976543322110 0 0122232222
Q ss_pred cccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhh-------cCC---C
Q 012838 348 LLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDE-------KLK---Q 417 (455)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~-------~~~---~ 417 (455)
..+....+.+++++.++.+.|+|+|+.++|+.|++++||++||+ +|+++|+++++.++ .+. +
T Consensus 340 -------~~~~~~~~~~~~~~vd~~v~VsD~ei~~a~~~L~~~~gi~vEpS-~AaalAa~~~l~~~~~~~~~~~l~~~~~ 411 (441)
T PRK02991 340 -------GRASGFVGRAMERLLDGVYTVSDETLYRLLGLLADTEGIRLEPS-ALAGMAGPVRVCASVAYLQRHGLSEQLK 411 (441)
T ss_pred -------CCcchhHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCceeeHH-HHHHHHHHHHHHhCHHHHHHcCCccccC
Confidence 22233456667788999999999999999999999999999996 78999999876543 122 5
Q ss_pred CCeEEEEecCCCcchhhhHHHHHHHh
Q 012838 418 DADVVMLHTGGTLGMFGLAQRYKSSF 443 (455)
Q Consensus 418 g~~VV~I~TGG~~~~~~~~~ry~~~~ 443 (455)
+++||+|.|||+.-....+..|+.+-
T Consensus 412 ~~~vv~~~~gg~~~~~~~~~~~~~~~ 437 (441)
T PRK02991 412 NATHLVWATGGSMVPEEEMEQYLAKG 437 (441)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHhh
Confidence 78999999999988888887887653
No 60
>PLN03013 cysteine synthase
Probab=100.00 E-value=2.4e-38 Score=326.92 Aligned_cols=286 Identities=14% Similarity=0.049 Sum_probs=207.6
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC-----CEEEe--cCch
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLVT--CGGC 150 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~-----~~VVt--~G~~ 150 (455)
.|+|||+++ ++++ +.. +.+||+|+|.+| | +||||||.+.++|.+|++.|. ++||+ +||.
T Consensus 121 iG~TPLv~l--~~l~-~~~---------g~~Iy~KlE~lN-P-tGSfKdR~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~ 186 (429)
T PLN03013 121 IGKTPMVYL--NSIA-KGC---------VANIAAKLEIME-P-CCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNT 186 (429)
T ss_pred CCCCCeEEC--cccc-ccc---------CCeEEEEeccCC-C-ccccHHHHHHHHHHHHHHcCCcCCCCcEEEEECCcHH
Confidence 489999999 8877 321 579999999996 8 799999999999999998885 55884 4554
Q ss_pred hHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCc-hhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 151 QSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTH-YAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 151 ~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~-~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
+...+ +|+.+|++|+||||+..+.. +..+++.||| |+.|+... ++. ..+ .|++
T Consensus 187 G~ALA~~a~~~G~~~~VvvP~~~s~~---K~~~ira~GAeVi~v~~~~~~~~---a~~-~A~e----------------- 242 (429)
T PLN03013 187 GIGLAFIAASRGYRLILTMPASMSME---RRVLLKAFGAELVLTDPAKGMTG---AVQ-KAEE----------------- 242 (429)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCcHH---HHHHHHHcCCEEEEECCCCChHH---HHH-HHHH-----------------
Confidence 43333 57799999999999987654 4566899999 99997642 211 111 1221
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
+.+..++.| ++.++.||... .||+++|.||++|+ + ..||+||+|+||||+++|++
T Consensus 243 --------------------la~~~~g~~-~~~qy~Np~n~~ah~~ttg~EI~eq~--~-~~~D~vV~~vGtGGtisGia 298 (429)
T PLN03013 243 --------------------ILKNTPDAY-MLQQFDNPANPKIHYETTGPEIWDDT--K-GKVDIFVAGIGTGGTITGVG 298 (429)
T ss_pred --------------------HHhhcCCeE-eCCCCCCHHHHHHHHHHHHHHHHHhc--C-CCCCEEEEeCCccHHHHHHH
Confidence 112223444 45778899886 49999999999996 3 36999999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHh-hHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQ-EKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~-~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
++|++..|+++|||||++++....... ....+ +.+|.+.+ ...+.....++.+.|+|+|++++++
T Consensus 299 r~lKe~~P~vkVigVep~gs~~l~~g~~~~~~i----~Glg~~~i----------p~~~~~~~vD~vv~VsD~ea~~a~r 364 (429)
T PLN03013 299 RFIKEKNPKTQVIGVEPTESDILSGGKPGPHKI----QGIGAGFI----------PKNLDQKIMDEVIAISSEEAIETAK 364 (429)
T ss_pred HHHHhhCCCCEEEEEEeCCCchhhCCCCCCccc----CcccCCcC----------CHhHHHHhccEEEEECHHHHHHHHH
Confidence 999999999999999999975421100 00111 11222111 1223445677899999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhHHHHHHHhccc
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLAQRYKSSFHSL 446 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~~ry~~~~~~~ 446 (455)
+|++++||++||+ +|++++++++++++...++++||+++ .++..++|.+++..+
T Consensus 365 ~La~~eGi~vG~S-SGAalaAalkla~~~~~~g~~IVv~i------~~d~g~~Y~~~~~~~ 418 (429)
T PLN03013 365 QLALKEGLMVGIS-SGAAAAAAIKVAKRPENAGKLIAVSL------FASGRDIYTPRCSSL 418 (429)
T ss_pred HHHHHcCCEEecC-HHHHHHHHHHHhhhccCCCCEEEEEE------cCCCchhchhhhhcC
Confidence 9999999999996 78999999998765334577776655 133445666665443
No 61
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=100.00 E-value=3.9e-38 Score=322.70 Aligned_cols=282 Identities=14% Similarity=0.064 Sum_probs=201.4
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC-----CCEEEec--Cch
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI-----VTDLVTC--GGC 150 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G-----~~~VVt~--G~~ 150 (455)
.|+|||+++ ++++ +.. |.+||+|+|++| | +||||+|++.++|.+|++.| +++||++ ||.
T Consensus 57 ig~TPl~~l--~~l~-~~~---------g~~I~~KlE~~n-P-tGS~KdR~A~~~l~~a~~~G~i~pG~~~vV~aSsGN~ 122 (368)
T PLN02556 57 IGKTPLVYL--NKVT-EGC---------GAYIAAKQEMFQ-P-TSSIKDRPALAMIEDAEKKNLITPGKTTLIEPTSGNM 122 (368)
T ss_pred cCCCccEEc--cccc-ccc---------CCEEEEEecccC-C-ccchHHHHHHHHHHHHHHcCCcCCCCCEEEEeCCchH
Confidence 389999999 8887 322 679999999996 8 79999999999999999986 4678853 333
Q ss_pred hHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHH
Q 012838 151 QSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEAS 228 (455)
Q Consensus 151 ~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~ 228 (455)
+...+ +|+.+|++|+||||...+. .+..+++.||| |+.++... .. ....+. |.
T Consensus 123 G~alA~~a~~~G~~~~ivvp~~~~~---~k~~~lr~~GA~Vi~~~~~~-~~-~~~~~~-a~------------------- 177 (368)
T PLN02556 123 GISLAFMAAMKGYKMILTMPSYTSL---ERRVTMRAFGAELVLTDPTK-GM-GGTVKK-AY------------------- 177 (368)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCH---HHHHHHHHcCCEEEEECCCC-Cc-cHHHHH-HH-------------------
Confidence 32222 5679999999999987543 35677999999 99887421 10 011110 11
Q ss_pred HHhhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHH
Q 012838 229 LTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
++.++.++.|+ ..++.||... .||.+++.||++|+ + ..||+||+|+|||||++|+++
T Consensus 178 ------------------~l~~~~~~~~~-~~q~~np~~~~~g~~ttg~EI~eq~--~-~~~D~vV~~vGtGGt~aGv~~ 235 (368)
T PLN02556 178 ------------------ELLESTPDAFM-LQQFSNPANTQVHFETTGPEIWEDT--L-GQVDIFVMGIGSGGTVSGVGK 235 (368)
T ss_pred ------------------HHHHhcCCCCc-cCCCCCHHHHHHHHHHHHHHHHHhc--C-CCCCEEEEcCCcchHHHHHHH
Confidence 11112234443 4567899887 49999999999995 3 379999999999999999999
Q ss_pred HHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHH
Q 012838 308 GAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRI 387 (455)
Q Consensus 308 g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~L 387 (455)
+|++.+++++|||||++++.... ...... ..+ ..++.+. + .. .+..+..++.+.|+|+|+++++++|
T Consensus 236 ~lk~~~p~~kVigVep~~~~~~~-~g~~~~-~~i-~g~g~~~-------~-p~--~~~~~~~d~~v~Vsd~ea~~a~r~l 302 (368)
T PLN02556 236 YLKSKNPNVKIYGVEPAESNVLN-GGKPGP-HHI-TGNGVGF-------K-PD--ILDMDVMEKVLEVSSEDAVNMAREL 302 (368)
T ss_pred HHHHhCCCCEEEEEeeCCCcccc-CCCCCC-eee-eeccCCC-------C-cc--ccchhhCCeEEEECHHHHHHHHHHH
Confidence 99999999999999998864321 110000 000 1112111 1 11 1234556779999999999999999
Q ss_pred HHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhh
Q 012838 388 AQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFG 434 (455)
Q Consensus 388 a~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~ 434 (455)
++++||++||+ ||++++++++++++...++++||+|+++ |...+..
T Consensus 303 ~~~eGi~vg~s-sgA~~~aal~~a~~~~~~~~~IV~v~~d~g~kY~~~ 349 (368)
T PLN02556 303 ALKEGLMVGIS-SGANTVAALRLAKMPENKGKLIVTVHPSFGERYLSS 349 (368)
T ss_pred HHHcCCEEecC-HHHHHHHHHHHhhhccCCcCEEEEEECCCCcccCCh
Confidence 99999999996 6777777777766533357889999887 6666554
No 62
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=100.00 E-value=1.8e-38 Score=334.51 Aligned_cols=284 Identities=12% Similarity=0.026 Sum_probs=205.4
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEecCchhHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAH 154 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~G~~~sNh 154 (455)
++|||+++ ++++ +.+ |.+||+|+|++| | +||||+|++.+++.+|++.|+ ++||++++ +||
T Consensus 10 ~~TPl~~~--~~l~-~~~---------~~~i~~K~E~~n-p-tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~~ss--GN~ 73 (454)
T TIGR01137 10 GNTPLVRL--NKVS-KGI---------KCELLAKCEFFN-P-GGSVKDRIALRMIEDAEASGRLKPGDTIIEPTS--GNT 73 (454)
T ss_pred CCCceEEc--cccC-CCC---------CceEEEEEhhcC-C-CcchHHHHHHHHHHHHHHcCCCCCCCEEEEeCC--cHH
Confidence 89999999 8888 432 568999999996 8 799999999999999999888 78886532 455
Q ss_pred H-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC-chhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 155 A-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT-HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 155 a-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~-~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
+ +|+.+|++|+||||...++. +..+++.||| |+.++.. .++..+...+ .|++
T Consensus 74 g~alA~~a~~~G~~~~iv~p~~~~~~---k~~~~~~~GA~v~~~~~~~~~~~~~~~~~-~a~~----------------- 132 (454)
T TIGR01137 74 GIGLALVAAIKGYKCIIVLPEKMSNE---KVDVLKALGAEIVRTPTAAAFDSPESHIG-VAKR----------------- 132 (454)
T ss_pred HHHHHHHHHHcCCeEEEEeCCCcCHH---HHHHHHHCCCEEEEcCCccCCCchHHHHH-HHHH-----------------
Confidence 4 46699999999999876533 5667899999 9998753 1332211111 1111
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
+..+.++ ++++.++.||... .||.+++.||++|+ ++ .||+||+|+|||||++|++
T Consensus 133 --------------------l~~~~~~-~~~~~~~~~~~~~~~~~~t~~~Ei~~q~--~~-~~d~vv~~vG~Gg~~~G~~ 188 (454)
T TIGR01137 133 --------------------LVREIPG-AHILDQYNNPSNPLAHYDGTGPEILEQC--EG-KLDMFVAGAGTGGTITGIA 188 (454)
T ss_pred --------------------HHHhCCC-cEecccCCChhhHHHHHHhhHHHHHHHh--CC-CCCEEEEecCchHHHHHHH
Confidence 1222223 3456676676653 68999999999997 32 6999999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHhhH--hHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQEK--NLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEAC 384 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~~~--~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~ 384 (455)
.+|++..+.++|+|||++++......... .........++. + .....+.....++.+.|+|+|+++++
T Consensus 189 ~~~~~~~~~~~vi~ve~~~~~~~~~~~~~~~~~~~~~~~g~~~-------~---~~~~~~~~~~~d~~~~V~~~e~~~a~ 258 (454)
T TIGR01137 189 RYLKESNPKCRIVGADPEGSILAQPENLNKTGRTPYKVEGIGY-------D---FIPTVLDRKVVDEWIKTDDKESFKMA 258 (454)
T ss_pred HHHHhhCCCCEEEEEecCCCcccCCCcccCCCCCCccCCCCCC-------C---CCCCcCCchhCCeEEEECHHHHHHHH
Confidence 99999999999999999987521110000 000000011111 0 01112234566778999999999999
Q ss_pred HHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhh
Q 012838 385 HRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFG 434 (455)
Q Consensus 385 r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~ 434 (455)
++|++++||++||+ ||++++|+++++++.+.++++||+|+|+ |...+.+
T Consensus 259 ~~l~~~~gi~~~~s-sg~~~aa~~~~~~~~~~~~~~vv~~~~d~g~~y~~~ 308 (454)
T TIGR01137 259 RRLIKEEGLLVGGS-SGSAVVAALKAAEDELTEDQVIVVLLPDSIRNYMTK 308 (454)
T ss_pred HHHHHHhCccCcHH-HHHHHHHHHHHHHhhcCCCCEEEEEECCCCccccCc
Confidence 99999999999997 8999999999876445668899999987 5555443
No 63
>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme. This model represents a family of pyridoxal-phosphate dependent enzyme (pfam00291) closely related to the beta subunit of tryptophan synthase (TIGR00263). However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found.
Probab=100.00 E-value=5.1e-38 Score=326.28 Aligned_cols=318 Identities=14% Similarity=0.088 Sum_probs=207.9
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha 155 (455)
++++|||+++ ++|+ +.+|. +.+||+|+|++| | +||||+|.+.+++..+++.|.+++|| +|+ +||+
T Consensus 65 ~g~pTPL~r~--~~L~-~~lg~-------~~~Iy~K~E~~n-P-tGS~K~R~A~~~~~~a~~~G~~~~vtetss--GN~G 130 (419)
T TIGR01415 65 IGRPTPLIRA--KGLE-ELLGT-------PARIYYKYESVS-P-TGSHKINTAIAQAYYAKIEGAKRLVTETGA--GQWG 130 (419)
T ss_pred cCCCCCeEEc--cchh-hhhCC-------CceEEEEECCCC-C-CCCcHHHHHHHHHHHHHHcCCCeEEEecCc--hHHH
Confidence 4579999999 9998 65542 469999999997 8 79999999999999999999999997 454 3444
Q ss_pred -----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 -----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 -----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|+||||...+..+..+..+|+.||| |+.++.. +++ ..+...+.-.+..|...|. +.
T Consensus 131 ~alA~aaa~~Gl~~~V~mp~~s~~~k~~k~~~m~~~GA~Vi~~~~~-~~~---~~r~~~~~~p~~~gsl~~a---i~--- 200 (419)
T TIGR01415 131 SALSLAGALFGLECKVFMVRVSFNQKPYRKYLMELYGAEVIPSPSE-FTE---FGREVLKEDPDHPGSLGIA---IS--- 200 (419)
T ss_pred HHHHHHHHHcCCcEEEEEeCCCcccCHHHHHHHHHcCCEEEEECCc-hhh---HHHHhhhcccccccchHHH---HH---
Confidence 577999999999997554333335567899999 9999864 432 1110000000111111111 00
Q ss_pred Hhhhhhcccccccccccccc-ccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHH-cCCCCCCEEEEeCCCcchHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGID-NCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHL-LGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~-~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~-~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
.+.+.. ..+...|+. .+..|+. ..|+.++++||++|+. .+ ..||+||+|+|+|||++|++.
T Consensus 201 --------------~a~e~a~~~~~~~y~~-~~~~n~~-~~h~~~ig~Ei~~Ql~~~g-~~pD~vv~~vG~Gg~~~Gi~~ 263 (419)
T TIGR01415 201 --------------EAIEYALSDEDTKYSL-GSVLNHV-LLHQTVIGLEAKKQMEEAG-EDPDVIIGCVGGGSNFAGLAF 263 (419)
T ss_pred --------------HHHHHHHhCCCCEEEe-CCCCcHH-HHHHHHHHHHHHHHHHhcC-CCCCEEEEEeCchHHHHHHHH
Confidence 011111 222345654 3444543 4578899999999984 22 359999999999999999999
Q ss_pred HHHh---cC-CCceEEEEeccCChhhHHHhhH-------hHHHHH-HHHhcccccCCC-------cCccccccchheeec
Q 012838 308 GAIC---LG-LPWEVTAIALVDTIDGYKQQEK-------NLISEF-KRLFGFLLKKSS-------LNEVDGEIVHWVERC 368 (455)
Q Consensus 308 g~~~---~g-~~~~vigVe~~g~~~~~~~~~~-------~l~~~~-~~~ig~~~~~~~-------~~~~~~~~~~l~~~~ 368 (455)
+|.+ .| ++++|||||+++++........ .+.... ..++|.+.+|.. +..+......+.++.
T Consensus 264 ~f~~~~l~g~~~~rviaVep~~~~~l~~g~~~yd~~~~~~~~p~~~~~~lG~~~~p~~~~a~gl~~~~~~~~~~~l~~~~ 343 (419)
T TIGR01415 264 PFVADKLSGKIDRRFIAAEPKACPTLTRGEYRYDFGDTAGLTPLLKMYTLGHDFIPPPIHAGGLRYHGVAPTLSLLVNLG 343 (419)
T ss_pred HHHHHHhcCCCCCEEEEEeeCCChhhhcCcccccccccccCCcceeeeecCCCCCCcceeccccccCCccHHHHHHhhcC
Confidence 9843 24 4799999999987653322100 000000 011222222211 000011111222333
Q ss_pred cCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcC--CCCCeEEEEecC-CCcchhhhH
Q 012838 369 RPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKL--KQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 369 ~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~--~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
....+.|+|+|+++|+++++++|||++||+ ||++++++++++++.. .+++.||+++|| |+.|+..+.
T Consensus 344 ~~~~~~V~d~e~~~a~r~la~~eGi~~eps-sa~alaaai~~a~~~~~~~~~~vvv~~lsG~G~~d~~~y~ 413 (419)
T TIGR01415 344 IVEARAYDQEEAFEAAVIFAKTEGIVPAPE-SAHAIAAAIDEARKCRETGEEKVILFNLSGHGLLDLKAYA 413 (419)
T ss_pred ceEEEEECHHHHHHHHHHHHHhcCCccccH-HHHHHHHHHHHHHhcCcCCCCeEEEEEcCCCCcCCHHHHH
Confidence 345788999999999999999999999997 8999999998876532 223368899999 999977643
No 64
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=100.00 E-value=5.3e-38 Score=312.84 Aligned_cols=261 Identities=17% Similarity=0.118 Sum_probs=193.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEecCchhHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAH 154 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~G~~~sNh 154 (455)
++|||+++ ++++ +.+ |.+||+|+|++| | +||||+|.+.+++..|++.|. ++||++++ +||
T Consensus 7 g~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~v~~a~~~g~~~~g~~vv~aSs--GN~ 70 (290)
T TIGR01138 7 GNTPLVRL--QRMG-PEN---------GSEVWLKLEGNN-P-AGSVKDRPALSMIVEAEKRGEIKPGDVLIEATS--GNT 70 (290)
T ss_pred CCCceEEc--cccc-cCC---------CCeEEEEEccCC-C-CccHHHHHHHHHHHHHHHcCCCCCCCEEEEECC--ChH
Confidence 89999999 8887 332 679999999996 8 899999999999999999987 77886422 344
Q ss_pred H-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC-chhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 155 A-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT-HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 155 a-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~-~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
+ +|+.+|++|+||||+..+.. +..+++.||| |+.|+.. .++. +. ..++++
T Consensus 71 g~alA~~a~~~G~~~~i~~p~~~~~~---k~~~~~~~GA~v~~v~~~~~~~~---~~-~~a~~l---------------- 127 (290)
T TIGR01138 71 GIALAMIAALKGYRMKLLMPDNMSQE---RKAAMRAYGAELILVTKEEGMEG---AR-DLALEL---------------- 127 (290)
T ss_pred HHHHHHHHHHcCCeEEEEECCCCCHH---HHHHHHHcCCEEEEeCCCCChHH---HH-HHHHHH----------------
Confidence 4 56799999999999886533 5567899999 9999863 2332 21 112222
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHH-HHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALL-GVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~-G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
.+..+..|+ .++.|+.... ||++++.||++|+ + ..||+||+|+|||||++|++
T Consensus 128 ---------------------~~~~~~~~~--~~~~~~~~~~~~~~t~~~Ei~~q~--~-~~~d~iv~~vG~Gg~~~Gv~ 181 (290)
T TIGR01138 128 ---------------------ANRGEGKLL--DQFNNPDNPYAHYTSTGPEIWQQT--G-GRITHFVSSMGTTGTIMGVS 181 (290)
T ss_pred ---------------------HHhCCCCCC--CccCCcccHHHHhHhHHHHHHHHc--C-CCCCEEEECCCchHHHHHHH
Confidence 122222332 3334444333 5899999999996 3 26899999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
.+|+++++++||||||+.++... .. + ..++....+ .. +.....++.+.|+|+|+++++++
T Consensus 182 ~~lk~~~~~~kvi~Vep~~~~~~--~g---~-----~~~~~~~~~--------~~--~~~~~~d~~v~V~d~e~~~a~~~ 241 (290)
T TIGR01138 182 RFLKEQNPPVQIVGLQPEEGSSI--PG---I-----RRWPTEYLP--------GI--FDASLVDRVLDIHQRDAENTMRE 241 (290)
T ss_pred HHHHHhCCCCEEEEEeCCCCCCc--cC---C-----CCCCCCcCC--------cc--cChhhCcEEEEECHHHHHHHHHH
Confidence 99999999999999999886431 11 0 011111111 11 12334567899999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG 427 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG 427 (455)
|++++||++||+ +|++++++++++++ + ++++||+|+|+
T Consensus 242 l~~~~gi~~g~s-sga~laa~~~~~~~-~-~~~~vv~v~~d 279 (290)
T TIGR01138 242 LAVREGIFCGVS-SGGAVAAALRLARE-L-PDAVVVAIICD 279 (290)
T ss_pred HHHHhCceEcHh-HHHHHHHHHHHHHH-C-CCCeEEEEECC
Confidence 999999999996 78999999988764 4 47889999987
No 65
>PRK11761 cysM cysteine synthase B; Provisional
Probab=100.00 E-value=1.9e-37 Score=309.64 Aligned_cols=264 Identities=14% Similarity=0.094 Sum_probs=194.2
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEEec--CchhH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTC--GGCQS 152 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VVt~--G~~~s 152 (455)
++|||+++ ++|+ +.+ |.+||+|+|++| | +||||+|.+.+++.+|++.|. ++||++ ||.+.
T Consensus 11 g~TPl~~~--~~l~-~~~---------g~~i~~K~E~~n-p-tGS~K~R~a~~~~~~a~~~g~~~~g~~vv~aSsGN~g~ 76 (296)
T PRK11761 11 GNTPLVKL--QRLP-PDR---------GNTILAKLEGNN-P-AGSVKDRPALSMIVQAEKRGEIKPGDTLIEATSGNTGI 76 (296)
T ss_pred CCCceEec--cccc-cCC---------CCEEEEEEcccC-C-CCCchhHHHHHHHHHHHHcCCCCCCCEEEEeCCChHHH
Confidence 89999999 8887 322 679999999996 8 899999999999999999987 678863 33322
Q ss_pred HHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC-chhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 153 AHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT-HYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 153 Nha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~-~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
..| +|+.+|++|+||||+..++ .+..+++.||| |+.++.. .++. +.+ .|++
T Consensus 77 alA~~a~~~G~~~~i~~p~~~~~---~k~~~~~~~GA~v~~~~~~~~~~~---~~~-~a~~------------------- 130 (296)
T PRK11761 77 ALAMIAAIKGYRMKLIMPENMSQ---ERRAAMRAYGAELILVPKEQGMEG---ARD-LALQ------------------- 130 (296)
T ss_pred HHHHHHHHcCCCEEEEECCCCCH---HHHHHHHHcCCEEEEeCCCCChHH---HHH-HHHH-------------------
Confidence 222 5679999999999998653 35667899999 9999862 2332 211 1221
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHH-HHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLG 308 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~-~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g 308 (455)
+..+... +++ .++.|+... .||++++.||++|+ + ..+|+||+|+||||+++|++++
T Consensus 131 ------------------l~~~~~~-~~~-~~~~n~~~~~~~~~t~~~Ei~eq~--~-~~~d~iv~~vG~Gg~~~Gi~~~ 187 (296)
T PRK11761 131 ------------------MQAEGEG-KVL-DQFANPDNPLAHYETTGPEIWRQT--E-GRITHFVSSMGTTGTIMGVSRY 187 (296)
T ss_pred ------------------HHhccCC-Eec-CCCCChhhHHHHhhchHHHHHHhc--C-CCCCEEEecCCcHHHHHHHHHH
Confidence 1122222 333 345566543 36899999999996 3 2589999999999999999999
Q ss_pred HHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHH
Q 012838 309 AICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIA 388 (455)
Q Consensus 309 ~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La 388 (455)
|+++++.++|+|||++++.... + ++. .+... .. . .+.....++.+.|+|+|+++++++|+
T Consensus 188 lk~~~~~~kvigVep~~~~~i~---------g----~~~--~~~~~--~~-~--~~~~~~vd~~v~V~d~e~~~a~~~l~ 247 (296)
T PRK11761 188 LKEQNPAVQIVGLQPEEGSSIP---------G----IRR--WPEEY--LP-K--IFDASRVDRVLDVSQQEAENTMRRLA 247 (296)
T ss_pred HHHhCCCCEEEEEecCCCCcCc---------C----CCC--CCCCc--CC-c--ccChhhCCEEEEECHHHHHHHHHHHH
Confidence 9999999999999998754211 0 010 00000 00 0 11234566789999999999999999
Q ss_pred HHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCC
Q 012838 389 QLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGG 428 (455)
Q Consensus 389 ~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG 428 (455)
+++||++||+ +|+++++++++.++ .++++||+|+|++
T Consensus 248 ~~~gi~ve~s-sga~laaa~~~~~~--~~~~~vV~v~~d~ 284 (296)
T PRK11761 248 REEGIFCGVS-SGGAVAAALRIARE--NPNAVIVAIICDR 284 (296)
T ss_pred HHhCceEchh-HHHHHHHHHHHHHH--CCCCeEEEEECCC
Confidence 9999999996 78999999988664 3578999999883
No 66
>PLN02356 phosphateglycerate kinase
Probab=100.00 E-value=7.3e-38 Score=323.16 Aligned_cols=306 Identities=13% Similarity=0.019 Sum_probs=202.4
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCC----EEE--ecCchhH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVT----DLV--TCGGCQS 152 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~----~VV--t~G~~~s 152 (455)
|+|||+++ ++|+ +.+ |.+||+|+|++| | +||||||.+.+++.+|++.|.. .|+ |+||.+.
T Consensus 52 g~TPLv~~--~~l~-~~~---------g~~v~~KlE~~n-P-tGS~KdR~A~~~i~~a~~~g~~~~~g~VveaSSGN~g~ 117 (423)
T PLN02356 52 GNTPLIRI--NSLS-EAT---------GCEILGKCEFLN-P-GGSVKDRVAVKIIEEALESGQLFPGGVVTEGSAGSTAI 117 (423)
T ss_pred CCCceEEC--cccc-ccc---------CCEEEEEeccCC-C-CCCHHHHHHHHHHHHHHhCCccCCCCEEEEeCCHHHHH
Confidence 89999999 8887 332 678999999996 8 7999999999999999987753 455 3444443
Q ss_pred HHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC------chhh-HH---HHHHHHhhhhhcCCCCccc
Q 012838 153 AHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT------HYAH-RI---EMLKSYANLVAGNNGDVVW 220 (455)
Q Consensus 153 Nha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~------~~~~-~~---~~~~~~A~~la~~~g~~~w 220 (455)
..+ +|+.+|++|+||||...+.. +..+++.||| |+.|+.. .+.. .. +..+..|+++++..+...|
T Consensus 118 alA~~aa~~G~~~~ivvP~~~s~~---K~~~ir~~GAeVi~v~~~~~~~~~~~~~~a~~~~~~a~e~a~~~~~~~~~~~~ 194 (423)
T PLN02356 118 SLATVAPAYGCKCHVVIPDDVAIE---KSQILEALGATVERVRPVSITHKDHYVNIARRRALEANELASKRRKGSETDGI 194 (423)
T ss_pred HHHHHHHHcCCcEEEEECCCCcHH---HHHHHHHcCCEEEEECCccCCCcchhHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 333 57799999999999987654 4456899999 9988641 1211 00 0011112221111111111
Q ss_pred hhhhhHHHHHhhhhhcccccccccccccccc-------CCeEEEecCCCCcHHH--HHHHHHHHHHHHHHHHcCCCCCCE
Q 012838 221 CNEIFEASLTAQKSRASCLGQMDAHKGIDNC-------RKKVLIVNEGAGDAVA--LLGVFRLLQYLSQDHLLGRKRAIK 291 (455)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~y~ip~g~~np~~--~~G~~t~~~Ei~eq~~~g~~~pD~ 291 (455)
.. +. ....+.+..+. .++ ++++.++.||.. ..|+ .+|+||++|+ + ..||+
T Consensus 195 ~~--~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~~q~~n~~n~~ahg~-gTg~EI~eQl--~-g~~D~ 253 (423)
T PLN02356 195 HL--EK--------------TNGCISEEEKENSLFSSSCTG-GFFADQFENLANFRAHYE-GTGPEIWEQT--Q-GNLDA 253 (423)
T ss_pred cc--cc--------------cccccccccccccccccCCCC-cEecCccCCcchHHHHHh-hHHHHHHHhc--C-CCCCE
Confidence 10 00 00000110010 123 334577778765 3344 4599999996 3 26999
Q ss_pred EEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhhH---------HHhhHh-HH----HHHHHHhcccccCCCcCcc
Q 012838 292 FVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGY---------KQQEKN-LI----SEFKRLFGFLLKKSSLNEV 357 (455)
Q Consensus 292 vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~---------~~~~~~-l~----~~~~~~ig~~~~~~~~~~~ 357 (455)
||+|+|||||++|++++||+++|+++|+|||+.++...- .+.... .+ +.+++.++. +
T Consensus 254 vVv~vGtGGti~Gva~~lK~~~P~vkVigVep~~s~~~~~~~~~~~~~~s~~~G~~~~~~~~tia~Gig~-------~-- 324 (423)
T PLN02356 254 FVAAAGTGGTLAGVSRFLQEKNPNIKCFLIDPPGSGLFNKVTRGVMYTREEAEGRRLKNPFDTITEGIGI-------N-- 324 (423)
T ss_pred EEeCCCchHHHHHHHHHHHHhCCCCEEEEEecCCCccccccccchhhhhhhhcCCccCCCCCeecCcCcC-------C--
Confidence 999999999999999999999999999999998864210 000000 00 011111221 1
Q ss_pred ccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhh
Q 012838 358 DGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFG 434 (455)
Q Consensus 358 ~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~ 434 (455)
.....+.....++.+.|+|+|+++++++|++++||++||+ +|+++++++++++. +.++++||+|+|| |...+..
T Consensus 325 -~~~~~~~~~~vD~~v~Vsd~ea~~a~r~L~~~~Gl~vg~S-saa~laaa~~la~~-~~~g~~VV~Il~d~G~kyl~~ 399 (423)
T PLN02356 325 -RLTQNFLMAKLDGAFRGTDKEAVEMSRYLLKNDGLFVGSS-SAMNCVGAVRVAQS-LGPGHTIVTILCDSGMRHLSK 399 (423)
T ss_pred -CCChhHhHHhCCcEEEECHHHHHHHHHHHHHHCCeeEeEC-HHHHHHHHHHHHHH-hCCCCeEEEEECCCCcchhhh
Confidence 1122344567888999999999999999999999999996 78999999998764 4568899999999 5444443
No 67
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=100.00 E-value=2.3e-37 Score=300.44 Aligned_cols=235 Identities=21% Similarity=0.233 Sum_probs=191.8
Q ss_pred CCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCC---CCEEEecCchhHHHH--
Q 012838 81 GPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI---VTDLVTCGGCQSAHA-- 155 (455)
Q Consensus 81 TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G---~~~VVt~G~~~sNha-- 155 (455)
|||+++ ++++ +. .+.+||+|+|++| | +||||||++.+++..+++.| .+.||++++ +||+
T Consensus 1 TPl~~~--~~l~-~~---------~~~~l~~K~e~~~-p-tgS~K~R~a~~~l~~a~~~g~~~~~~vv~~ss--GN~g~a 64 (244)
T cd00640 1 TPLVRL--KRLS-KL---------GGANIYLKLEFLN-P-TGSFKDRGALNLILLAEEEGKLPKGVIIESTG--GNTGIA 64 (244)
T ss_pred CCeeEc--cccc-cc---------cCCEEEEEecccC-C-cCCcHHHHHHHHHHHHHHcCCCCCCEEEEeCC--cHHHHH
Confidence 899999 8887 32 1679999999996 8 69999999999999999998 578886533 4555
Q ss_pred ---HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 156 ---TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 156 ---~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
+|..+|++|++|||...+. .+..+++.+|+ |+.+++. +++.... +++
T Consensus 65 lA~~a~~~g~~~~v~~p~~~~~---~~~~~~~~~Ga~v~~~~~~-~~~~~~~----a~~--------------------- 115 (244)
T cd00640 65 LAAAAARLGLKCTIVMPEGASP---EKVAQMRALGAEVVLVPGD-FDDAIAL----AKE--------------------- 115 (244)
T ss_pred HHHHHHHcCCCEEEEECCCCCH---HHHHHHHHCCCEEEEECCC-HHHHHHH----HHH---------------------
Confidence 4569999999999987643 46677899999 9999875 5432221 111
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
+.+..+++|+++. +.||...+|+.+++.||.+|+ .+..||+||+|+|||||++|++.+|++
T Consensus 116 ----------------~~~~~~~~~~~~~-~~n~~~~~g~~~~~~Ei~~q~--~~~~~d~ivvp~GtGg~~~G~~~~~~~ 176 (244)
T cd00640 116 ----------------LAEEDPGAYYVNQ-FDNPANIAGQGTIGLEILEQL--GGQKPDAVVVPVGGGGNIAGIARALKE 176 (244)
T ss_pred ----------------HHHhCCCCEecCC-CCCHHHHHHHHHHHHHHHHHc--CCCCCCEEEEecCccHHHHHHHHHHHH
Confidence 1222245676654 489999999999999999997 322599999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHh
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT 391 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~e 391 (455)
.++.++|+|||+ ..+.|+|+|++++++++++++
T Consensus 177 ~~~~~~ii~v~~-----------------------------------------------~~~~v~d~~~~~a~~~l~~~~ 209 (244)
T cd00640 177 LLPNVKVIGVEP-----------------------------------------------EVVTVSDEEALEAIRLLAREE 209 (244)
T ss_pred hCCCCEEEEEee-----------------------------------------------eEEEECHHHHHHHHHHHHHHc
Confidence 999999999998 256789999999999999999
Q ss_pred CCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCC
Q 012838 392 GILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGG 428 (455)
Q Consensus 392 GI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG 428 (455)
||++||+ +|++++++.++.++. .++++||+++|||
T Consensus 210 gi~~~ps-sa~~~aa~~~~~~~~-~~~~~vv~v~tg~ 244 (244)
T cd00640 210 GILVEPS-SAAALAAALKLAKKL-GKGKTVVVILTGG 244 (244)
T ss_pred CceECHh-HHHHHHHHHHHHHhc-CCCCEEEEEeCCC
Confidence 9999997 899999999987653 5688999999996
No 68
>PRK12391 tryptophan synthase subunit beta; Reviewed
Probab=100.00 E-value=2.2e-37 Score=321.94 Aligned_cols=319 Identities=13% Similarity=0.036 Sum_probs=210.2
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe-cCchhHHHH
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHA 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt-~G~~~sNha 155 (455)
..++|||+++ ++|+ +.+|. +.+||+|+|++| | +||||+|.+...+..+++.|.++++| +|+ +||+
T Consensus 74 ~~~~TPL~~~--~~L~-~~lg~-------~~~Iy~K~E~~n-P-tGS~K~R~A~~~a~~a~~~G~~~~vtetgs--GN~G 139 (427)
T PRK12391 74 LWRPTPLIRA--RRLE-KALGT-------PAKIYYKYEGVS-P-TGSHKPNTAVAQAYYNKKEGIKRLTTETGA--GQWG 139 (427)
T ss_pred ccCCCCeeEc--hhhH-hhhCC-------CceEEEEEcCCC-C-CCChHHHHHHHHHHHHHHCCCCEEEEccCc--hHHH
Confidence 4589999999 9998 55542 469999999997 8 79999999998888899999999986 444 3344
Q ss_pred -----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 -----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 -----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
+|+.+|++|+|||+...+..+..+..+|+.||| |+.++.. +++... +.+++.++.-.++...+.
T Consensus 140 ~alA~aaa~~Gl~~~V~mp~~s~~~k~~r~~~mr~~GA~Vi~~~~~-~~~~~~------~~~~~~~~~~gsl~~ai~--- 209 (427)
T PRK12391 140 SALALACALFGLECTVFMVRVSYEQKPYRRSLMETYGAEVIPSPSD-LTEAGR------KILAEDPDHPGSLGIAIS--- 209 (427)
T ss_pred HHHHHHHHHcCCcEEEEEecCCcccCHHHHHHHHHCCCEEEEECCc-hhhhhh------hhhhcCccccccHHHHHH---
Confidence 567999999999997543333334567999999 9998864 332111 011111111111111111
Q ss_pred Hhhhhhcccccccccccccc-ccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHH-cCCCCCCEEEEeCCCcchHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGID-NCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHL-LGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~-~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~-~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
.+.+.. ..+...|+++.. .| ....|+.++++||++|+. .| ..||+||+|+|+|||++|++.
T Consensus 210 --------------~A~e~a~~~~~~~y~~~s~-~~-~~~~~~~~ig~Ei~~Ql~~~g-~~pD~Vv~~vG~Gg~~aGi~~ 272 (427)
T PRK12391 210 --------------EAVEDAAKRPDTKYALGSV-LN-HVLLHQTVIGLEAKKQLELAG-EYPDVVIGCVGGGSNFAGLAF 272 (427)
T ss_pred --------------HHHHHHHhCCCcEEEcCCC-Cc-HHHhhHHHHHHHHHHHHHhcC-CCCCEEEEecCchHHHHHHHH
Confidence 011111 122345655432 22 345688889999999984 23 469999999999999999999
Q ss_pred HHH---hcC-CCceEEEEeccCChhhHHHhhH-------hHHH-HHHHHhcccccCCCcC-------ccccccchheeec
Q 012838 308 GAI---CLG-LPWEVTAIALVDTIDGYKQQEK-------NLIS-EFKRLFGFLLKKSSLN-------EVDGEIVHWVERC 368 (455)
Q Consensus 308 g~~---~~g-~~~~vigVe~~g~~~~~~~~~~-------~l~~-~~~~~ig~~~~~~~~~-------~~~~~~~~l~~~~ 368 (455)
+|. ..| +.+||||||+++++........ .+.. .-..++|.++++.... ...+....+.+..
T Consensus 273 ~f~~~~~~g~~~~riiaVEp~~~~~l~~g~~~~~~gd~~~~~p~~~~~~lG~~~~p~~~~a~gl~~~g~~~~~~~l~~~~ 352 (427)
T PRK12391 273 PFLGDKLEGKKDTRFIAVEPAACPTLTKGEYAYDFGDTAGLTPLLKMYTLGHDFVPPPIHAGGLRYHGMAPLVSLLVHEG 352 (427)
T ss_pred HHHHHHhcCCCCceEEEEeeccchhhccccccccccccccCCccceeEecCCCCCCccccccccccCCchHHHHHHHhcC
Confidence 884 346 8899999999987653321100 0000 0001223222221100 0000111222333
Q ss_pred cCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc--CCCCCeEEEEecC-CCcchhhhHH
Q 012838 369 RPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK--LKQDADVVMLHTG-GTLGMFGLAQ 437 (455)
Q Consensus 369 ~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~--~~~g~~VV~I~TG-G~~~~~~~~~ 437 (455)
..+.+.|+|+|+++++++++++|||++||+ |+++++++++++++. ..++++||+++|| |+.|+..+.+
T Consensus 353 ~~~~~~V~d~e~~~a~~~~a~~eGi~~~ps-s~~alaaa~~~a~~~~~~~~~~~iv~~lsG~G~~d~~~y~~ 423 (427)
T PRK12391 353 LIEARAYPQTEVFEAAVLFARTEGIVPAPE-SSHAIAAAIDEALKAKEEGEEKVILFNLSGHGLLDLAAYDA 423 (427)
T ss_pred ceEEEEECHHHHHHHHHHHHHHcCCeechH-HHHHHHHHHHHHHhccccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 346789999999999999999999999997 789999999887642 2347889999999 9999876543
No 69
>PLN02565 cysteine synthase
Probab=100.00 E-value=2.4e-37 Score=312.19 Aligned_cols=281 Identities=14% Similarity=0.062 Sum_probs=201.3
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC-----CEEEe--cCch
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLVT--CGGC 150 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~-----~~VVt--~G~~ 150 (455)
-++|||+++ ++++ ..+ +.+||+|+|.+| | +||||||.+.+++..+++.|. +.||+ +||.
T Consensus 13 ig~TPLv~l--~~l~-~~~---------~~~i~~K~E~~n-P-tGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~ 78 (322)
T PLN02565 13 IGKTPLVYL--NNVV-DGC---------VARIAAKLEMME-P-CSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNT 78 (322)
T ss_pred hCCCceEEc--cccC-CCC---------CceEEEEecccC-C-ccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChH
Confidence 389999998 7775 211 479999999997 8 899999999999999988775 55885 3443
Q ss_pred hHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCc-hhhHHHHHHHHhhhhhcCCCCccchhhhhHH
Q 012838 151 QSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTH-YAHRIEMLKSYANLVAGNNGDVVWCNEIFEA 227 (455)
Q Consensus 151 ~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~-~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~ 227 (455)
+...| +|..+|++|+||||+..+.. +..+++.||| |+.++... ++. ..+ .|+++
T Consensus 79 g~alA~~a~~~G~~~~ivvp~~~~~~---k~~~i~~~GA~V~~~~~~~~~~~---~~~-~a~~l---------------- 135 (322)
T PLN02565 79 GIGLAFMAAAKGYKLIITMPASMSLE---RRIILLAFGAELVLTDPAKGMKG---AVQ-KAEEI---------------- 135 (322)
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCcHH---HHHHHHHcCCEEEEeCCCCCcHH---HHH-HHHHH----------------
Confidence 33333 56799999999999986543 4566899999 98887631 222 111 12221
Q ss_pred HHHhhhhhccccccccccccccccCCeEEEecCCCCcHHH-HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHH
Q 012838 228 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVA-LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLG 306 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~-~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~ 306 (455)
.++.++.|++ .++.||.. ..||+++++||++|+ + ..||+||+|+||||+++|++
T Consensus 136 ---------------------~~~~~~~~~~-~q~~n~~n~~~~~~t~a~Ei~~q~--~-~~~d~vv~~vG~GG~l~Gi~ 190 (322)
T PLN02565 136 ---------------------LAKTPNSYIL-QQFENPANPKIHYETTGPEIWKGT--G-GKVDAFVSGIGTGGTITGAG 190 (322)
T ss_pred ---------------------HHhCCCcEee-cccCCHhHHHHHHHHHHHHHHHhc--C-CCCCEEEEcCCchHHHHHHH
Confidence 1222234444 44566643 358999999999996 3 26999999999999999999
Q ss_pred HHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHH
Q 012838 307 LGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHR 386 (455)
Q Consensus 307 ~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~ 386 (455)
++|++.++.+||||||++++..... ... .....+.++.+..+ ..+. .+..++.+.|+|+|+++++++
T Consensus 191 ~~lk~~~p~~kvi~Vep~~s~~~~~-g~~--~~~~~~glg~~~~~--------~~~~--~~~vd~~v~V~d~ea~~a~~~ 257 (322)
T PLN02565 191 KYLKEQNPDIKLYGVEPVESAVLSG-GKP--GPHKIQGIGAGFIP--------GVLD--VDLLDEVVQVSSDEAIETAKL 257 (322)
T ss_pred HHHHHhCCCCEEEEEecCCCccccC-CCC--CCccCCCCCCCCCC--------CcCC--HhHCCEEEEECHHHHHHHHHH
Confidence 9999999999999999998754311 100 00011112211111 1111 134567899999999999999
Q ss_pred HHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhh
Q 012838 387 IAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFG 434 (455)
Q Consensus 387 La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~ 434 (455)
|++++|+++||+ ||++++++++++++...++++||+|+|+ |...+.+
T Consensus 258 l~~~~gi~vg~s-sga~laaa~~~a~~~~~~~~~vV~v~~d~G~ky~~~ 305 (322)
T PLN02565 258 LALKEGLLVGIS-SGAAAAAAIKIAKRPENAGKLIVVIFPSFGERYLSS 305 (322)
T ss_pred HHHHhCcEEecc-HHHHHHHHHHHHHhcCCCCCeEEEEECCCccccCCc
Confidence 999999999996 7899999999986543457899999988 6665544
No 70
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=100.00 E-value=1.7e-37 Score=318.92 Aligned_cols=293 Identities=13% Similarity=0.050 Sum_probs=209.0
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCC-ceEEEEeCCCCCCCcccchhhhHHhhHHHHHh-------------------
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDED-RCFYVVRDDLLHPLVNGNKARKMDALLPLLED------------------- 138 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g-~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~------------------- 138 (455)
.+|||+++ ++|+ +.+ | .+||+|+|++|+| +||||+|+..+.+..+..
T Consensus 21 ~~TPL~~~--~~l~-~~~---------g~~~v~~K~E~~~~~-tgSFK~RG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 87 (376)
T TIGR01747 21 RPTPLCAL--DHLA-NLL---------GLKKILVKDESKRFG-LNAFKMLGGSYAIAQYLAEKLHLDIETLSFEHLKNDA 87 (376)
T ss_pred CCCCCcch--HHHH-HHh---------CCCcEEEeeCCCCCC-CCChHHHHHHHHHHHHHHHHhCCCcccCCHHHHhhhH
Confidence 68999999 8887 544 4 5899999999866 899999999888877633
Q ss_pred ----CCCCEEEecCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHh
Q 012838 139 ----HIVTDLVTCGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYA 208 (455)
Q Consensus 139 ----~G~~~VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A 208 (455)
.|.++||++++ +||+ +|+.+|++|+||||...+.. +...++.||| |+.|++. |++..+. |
T Consensus 88 ~~~~~~~~~vv~aSs--GN~g~a~A~~Aa~~G~~~~I~vP~~~~~~---k~~~i~~~GAeVi~v~~~-~~~a~~~----a 157 (376)
T TIGR01747 88 IGEKMGQATFATATD--GNHGRGVAWAAQQLGQKAVVYMPKGSAQE---RVENILNLGAECTITDMN-YDDTVRL----A 157 (376)
T ss_pred HHhhcCCCEEEEECc--cHHHHHHHHHHHHcCCCEEEEECCCCCHH---HHHHHHhCCCEEEEECCC-HHHHHHH----H
Confidence 24678886432 4454 56799999999999886643 4556899999 9999864 6643222 2
Q ss_pred hhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecC----CC--CcHHHHHHHHHHHHHHHHHH
Q 012838 209 NLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNE----GA--GDAVALLGVFRLLQYLSQDH 282 (455)
Q Consensus 209 ~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~----g~--~np~~~~G~~t~~~Ei~eq~ 282 (455)
++++. .. +.|+++. ++ .+|..++||.|++.||++|+
T Consensus 158 ~~~~~-------------------------------------~~-g~~~~~~~~~~~~~~~~~~ii~G~~Tia~Ei~eQl 199 (376)
T TIGR01747 158 MQMAQ-------------------------------------QH-GWVVVQDTAWEGYEKIPTWIMQGYATLADEAVEQL 199 (376)
T ss_pred HHHHH-------------------------------------hc-CcEEeccccccccccCCchHHHHHHHHHHHHHHHh
Confidence 22211 11 1233331 22 33677899999999999997
Q ss_pred H-cCCCCCCEEEEeCCCcchHHHHHHHHHhcC-C-CceEEEEeccCChhhHHHhhH---hHH--HHHHHHhcccccCCCc
Q 012838 283 L-LGRKRAIKFVVDAGTGTTAVGLGLGAICLG-L-PWEVTAIALVDTIDGYKQQEK---NLI--SEFKRLFGFLLKKSSL 354 (455)
Q Consensus 283 ~-~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g-~-~~~vigVe~~g~~~~~~~~~~---~l~--~~~~~~ig~~~~~~~~ 354 (455)
. .+|..||+||+|+|+||+++|++.+|++.. + .++|++||++++...+.+... .+. +.-..++.+ ++..
T Consensus 200 ~~~~~~~pD~vvvpvG~GGl~~Gi~~~~~~~~~~~~p~vi~Vep~ga~~~~~s~~~~~g~~~~~~~~~~Tiad---gl~~ 276 (376)
T TIGR01747 200 REMGSVTPTHVLLQAGVGSMAGGVLGYFVDVYSENNPHSIVVEPDKADCLYQSAVKKDGDIVNVGGDMATIMA---GLAC 276 (376)
T ss_pred hccCCCCCCEEEECCchhHHHHHHHHHHHHhcCCCCCEEEEEeeCCCCHHHHHHHhcCCCeEEcCCCcccccc---cccc
Confidence 3 223479999999999999999999997653 3 379999999998765544211 110 000011211 1122
Q ss_pred CccccccchheeeccCcEEEeCCHHHHHHHHHHHHHh----CCcccccchHHHHHHHHHHhh---------h-cCCCCCe
Q 012838 355 NEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLT----GILVDPVYTLAAWEMATLLSD---------E-KLKQDAD 420 (455)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~e----GI~veP~ysgaalAgl~~l~~---------~-~~~~g~~ 420 (455)
+.+....+.++++..+..+.|+|+|+.+|++.|++.. +|++||+ +++++|++...+. + .+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~v~V~D~ei~~A~~~L~~~~g~~~~i~~epa-ga~~la~l~~~~~~~~~~~~~~~~~~~~~~~ 355 (376)
T TIGR01747 277 GEPNPISWEILRNCTSQFISAQDSVAAKGMRVLGAPYGGDPRIISGES-GAVGLGLLAAVMYHPQYQSLMEKLQLDKDAV 355 (376)
T ss_pred CCcchHHHHHHHhcCCEEEEcCHHHHHHHHHHHhcccCCCCeEeeeCc-hHHHHHHHHHHHhCchHHHHHHHcCCCCCCE
Confidence 2233456778888999999999999999999999855 5999996 6788888774332 2 2556799
Q ss_pred EEEEecCCCcchhhhH
Q 012838 421 VVMLHTGGTLGMFGLA 436 (455)
Q Consensus 421 VV~I~TGG~~~~~~~~ 436 (455)
||+|+||||.+...++
T Consensus 356 vvvi~t~gn~d~~~~~ 371 (376)
T TIGR01747 356 VLVISTEGDTDPDHYR 371 (376)
T ss_pred EEEEeCCCCCCHHHHH
Confidence 9999999999987754
No 71
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=100.00 E-value=3.5e-38 Score=319.16 Aligned_cols=287 Identities=15% Similarity=0.024 Sum_probs=203.2
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCc-eEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEec--CchhHH
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDR-CFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTC--GGCQSA 153 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~-~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~--G~~~sN 153 (455)
..++|||+++ ++++ +.+ |. +||+|+|++| | +||||||++.+++..+.+.|..+||++ ||.+..
T Consensus 20 ~~g~TPl~~~--~~l~-~~~---------g~~~i~~K~E~~n-p-tGSfKdR~a~~~l~~a~~~g~~~vv~aSsGN~g~a 85 (328)
T TIGR00260 20 GEGVTPLFRS--PALV-ANV---------GIKNLYVLELFHN-P-TLSFKDRGMAVALTKALELGNDTVLCASTGNTGAA 85 (328)
T ss_pred ccCCccCccc--hHHH-Hhc---------CCccEEehhhccC-C-chhhHhhhHHHHHHHHHHcCCCEEEEeCCcHHHHH
Confidence 4599999999 8887 433 44 8999999997 8 899999999999999999999999863 333322
Q ss_pred HH-HHHHhCCeEEEEecCC-CccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 154 HA-TAVERGLKSHLLLRGE-QPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 154 ha-~Aa~~Gl~~~iv~~~~-~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
.+ +|+.+|++|+||||.. .+ ..+..+++.||| |+.++++ +++..+. +++++
T Consensus 86 ~A~~a~~~g~~~~v~~p~~~~s---~~k~~~~~~~GA~Vi~~~~~-~~~~~~~----~~~~~------------------ 139 (328)
T TIGR00260 86 AAAYAGKAGVKVVILYPAGKIS---LGKLAQALGYNAEVVAIDGN-FDDAQRL----VKQLF------------------ 139 (328)
T ss_pred HHHHhccCCCcEEEEECCCCCC---HHHHHHHHhcCcEEEEecCC-HHHHHHH----HHHHH------------------
Confidence 22 4669999999999987 44 236677899999 9999864 6543322 22111
Q ss_pred hhhhhccccccccccccccccCCeEEEecCCCCc--HHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGD--AVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLG 308 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n--p~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g 308 (455)
+... .|. .+..| |...+||.+++.||++|+ ++..||+||+|+||||+++|++.+
T Consensus 140 -------------------~~~~-~~~--~~~~n~~~~~~~g~~t~~~Ei~~q~--~~~~~d~iv~~vG~GG~~~G~~~~ 195 (328)
T TIGR00260 140 -------------------GDKE-ALG--LNSVNSIPYRLEGQKTYAFEAVEQL--GWEAPDKVVVPVPNSGNFGAILKG 195 (328)
T ss_pred -------------------hhcC-eee--cccCCCCCeEeeeehhHHHHHHHHh--CCCCCCEEEEECCCcchHHHHHHH
Confidence 1111 122 23344 777889999999999997 323699999999999999999999
Q ss_pred HHhc---C--CCceEEEEeccCChhhHHHhhH--hHHHH-HHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHH
Q 012838 309 AICL---G--LPWEVTAIALVDTIDGYKQQEK--NLISE-FKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGE 380 (455)
Q Consensus 309 ~~~~---g--~~~~vigVe~~g~~~~~~~~~~--~l~~~-~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei 380 (455)
|++. | ..++|+|||++++...+..... ..... ...++... +....+...+..+.+.+.+.+..+.|+|+|+
T Consensus 196 ~~~~~~~g~~~~p~v~~Ve~~~~~~~~~~~~~~g~~~~~~~~~t~~~~-l~~~~p~~~~~~~~~~~~~~~~~~~V~d~e~ 274 (328)
T TIGR00260 196 FKEKKEGGLDSLPVKRGIQAEGAADIVRAFLESGQWEPIEDPATLSTA-IDIGNPANWERALELFRRSNGNAEDVSDEEI 274 (328)
T ss_pred HHHHHhcCCccCCceeEEEcCCCChHHHHHHcCCCcCcCCCCCccCcc-eecCCCCCHHHHHHHHHhcCCcEEecCHHHH
Confidence 9974 2 0239999999997443322100 00000 00111110 0000010112244556678889999999999
Q ss_pred HHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCC
Q 012838 381 IEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGT 429 (455)
Q Consensus 381 ~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~ 429 (455)
+++++++++++||++||+ +|+++|+++++.++. +.++++||+++||+.
T Consensus 275 ~~a~~~l~~~~gi~~~ps-sa~alaa~~~~~~~~~~~~~~~vv~i~tG~~ 323 (328)
T TIGR00260 275 LEAIKLLAREEGYFVEPH-SAVSVAALLKLVEKGTADPAERVVCALTGNG 323 (328)
T ss_pred HHHHHHHHHhcCeeECch-HHHHHHHHHHHHhCCCCCCCCcEEEEecCCC
Confidence 999999999999999997 899999999987653 556889999999954
No 72
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=100.00 E-value=2.1e-37 Score=320.09 Aligned_cols=316 Identities=14% Similarity=0.122 Sum_probs=220.1
Q ss_pred CceeEEeeeHHHHHHHhhhhhhhccCCCcccchhhcccc----ccccCCCCCcccccCCCCCCcCCCcccccCCCc-eEE
Q 012838 36 QGICNVRMSGEELLSRLLDRKWALTSPDSKIHQIKLFTT----TEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDR-CFY 110 (455)
Q Consensus 36 ~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~-~ly 110 (455)
.|++++.|+.+... +.. ...+||+..++| ...+|.|||++. ++|+ +.+ |. +||
T Consensus 24 ~g~l~~~y~~~~~~--~~~--------~~~~wry~~~lP~~~~~~~~g~tpl~~~--~~L~-~~l---------G~~~v~ 81 (398)
T TIGR03844 24 CGLLRAEYAERQLT--LRD--------LPGIFRYYDWLPVTGHLRTRGGPVTYKS--EGLA-REL---------GLSDLY 81 (398)
T ss_pred CCceEEeecccccc--ccc--------CCchhhhHhhCCCCCCCCCCCCCceeeh--HHHH-HHh---------CCCeEE
Confidence 48999999865221 100 123444433333 235678999998 8887 444 45 899
Q ss_pred E-------EeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhh
Q 012838 111 V-------VRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYN 180 (455)
Q Consensus 111 l-------KrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~ 180 (455)
+ |+|++| | +||||||.+.++|..+.+.|.+.||+ +||.+.+.| +|+++|++|+||||...+. + .+
T Consensus 82 ~K~e~~~~K~E~~n-p-TGSFKdRga~~~i~~a~~~g~~~Vv~aSsGN~g~alA~~aa~~Gi~~~I~vP~~~~~-~-~~- 156 (398)
T TIGR03844 82 ITFSGYWPERGAFM-R-TCSFKELEALPTMQRLKERGGKTLVVASAGNTGRAFAEVSAITGQPVILVVPKSSAD-R-LW- 156 (398)
T ss_pred EEecCcccchhccC-C-ccccHHHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCChHH-H-HH-
Confidence 9 555586 8 89999999999999999999999985 444432222 5779999999999987432 1 12
Q ss_pred HHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEec
Q 012838 181 LISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVN 259 (455)
Q Consensus 181 ~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 259 (455)
..++.+|+ |+.+++. |++..+. |+++ .+. .+ ++.+
T Consensus 157 ~~~~~~ga~vv~v~g~-~d~a~~~----a~~~-------------------------------------a~~-~g-~~~~ 192 (398)
T TIGR03844 157 TTEPASSVLLVTVDGD-YTDAIAL----ADRI-------------------------------------ATL-PG-FVPE 192 (398)
T ss_pred HHhhCCcEEEEECCCC-HHHHHHH----HHHH-------------------------------------HHh-CC-cccc
Confidence 22478898 8888764 6643222 2111 111 12 2334
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhc---C----CCceEEEEeccCChhhHHH
Q 012838 260 EGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICL---G----LPWEVTAIALVDTIDGYKQ 332 (455)
Q Consensus 260 ~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~---g----~~~~vigVe~~g~~~~~~~ 332 (455)
.+..||..++|++|+++||+||+ + ..||+||+|+|+|+.+.|++++|+++ | ..++++|||++++.+...+
T Consensus 193 ~~~~~p~~ieG~~Ti~~Ei~eql--~-~~PD~VvvPvG~G~~~~~~~~~~~~l~~~g~i~~~~P~l~~VQ~eg~~p~~~a 269 (398)
T TIGR03844 193 GGARNVARRDGMGTVMLDAAVTI--G-SLPDHYFQAVGSGTGGIAAWEAAMRLIEDGRFGSKLPRLHLAQNLPFVPMVNA 269 (398)
T ss_pred CCCCCHHHHhhHHHHHHHHHHHc--C-CCCCEEEEecCCCHHHHHHHHHHHHHHHcCCccCCCCCEEEEEcCCchHHHHH
Confidence 44558999999999999999996 4 35999999999999999999999873 2 3489999999998654433
Q ss_pred hhHh--HH------H----HHHHHhcccccCCCcCcccc----ccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCccc
Q 012838 333 QEKN--LI------S----EFKRLFGFLLKKSSLNEVDG----EIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVD 396 (455)
Q Consensus 333 ~~~~--l~------~----~~~~~ig~~~~~~~~~~~~~----~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~ve 396 (455)
.... .. . .+.+++... +....+.. ..+..++++.+..+.|+|+||.+|++.|++++||++|
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~t~a~~---l~i~~p~~~~~~~~l~air~~~g~~v~Vsd~eI~~A~~~l~~~~gi~vE 346 (398)
T TIGR03844 270 WQEGRREIIPESDMPDAENSIEEVYSDV---LTNRTPPYGVTGGVFDALIATGGQMYGVSNKEAVSAGKLFEESEGIDIL 346 (398)
T ss_pred HHcCCCccccccCCccccccccceecce---eeeCCCCcchHHHHHHHHHHhCCEEEEECHHHHHHHHHHHHhhCCcccc
Confidence 2111 00 0 000122211 11111111 2367788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhhhc-CCCCCeEEEEecCCC
Q 012838 397 PVYTLAAWEMATLLSDEK-LKQDADVVMLHTGGT 429 (455)
Q Consensus 397 P~ysgaalAgl~~l~~~~-~~~g~~VV~I~TGG~ 429 (455)
|+ +|+++||++++.+++ +.++++||+|+||+.
T Consensus 347 pa-~A~alAal~k~~~~g~i~~~~~Vv~vlTG~g 379 (398)
T TIGR03844 347 PA-AAVAVAALVKAVESGFIGPDDDILLNITGGG 379 (398)
T ss_pred cc-HHHHHHHHHHHHHhCCCCCCCeEEEEECCcc
Confidence 97 789999999987664 557899999999965
No 73
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=308.47 Aligned_cols=284 Identities=15% Similarity=0.116 Sum_probs=215.9
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHH-HHhCCCCEEEecCchhHHHH
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL-LEDHIVTDLVTCGGCQSAHA 155 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~-A~~~G~~~VVt~G~~~sNha 155 (455)
+.-.|||.+. --|+ +.+ |.++|+|+||++ | +||||.|++.+++.. +++..+.+||++++ +||+
T Consensus 63 ~~~~TPl~~s--~~lS-~~~---------g~~vyLK~E~lQ-p-sgSFK~RGa~~~~~kla~~~~~~gViasSa--GNha 126 (457)
T KOG1250|consen 63 VIVETPLLKS--VALS-KKA---------GMPVYLKREDLQ-P-SGSFKIRGAGNALQKLAKQQKKAGVIASSA--GNHA 126 (457)
T ss_pred ceecccchhh--hhhh-hhc---------CCceEEEehhcc-c-ccceehhhHHHHHHHHHHhhhcCceEEecC--ccHH
Confidence 4567999987 6676 333 789999999998 8 899999999888877 55555889998755 6677
Q ss_pred H-----HHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHH
Q 012838 156 T-----AVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASL 229 (455)
Q Consensus 156 ~-----Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~ 229 (455)
. |.++|++|+||||..+|..+. ..++.+|| |+.... .|+...+ .|.++|.+
T Consensus 127 ~a~Ayaa~~LgipaTIVmP~~tp~~ki---q~~~nlGA~Vil~G~-~~deAk~----~a~~lAke--------------- 183 (457)
T KOG1250|consen 127 QAAAYAARKLGIPATIVMPVATPLMKI---QRCRNLGATVILSGE-DWDEAKA----FAKRLAKE--------------- 183 (457)
T ss_pred HHHHHHHHhcCCceEEEecCCChHHHH---HHHhccCCEEEEecc-cHHHHHH----HHHHHHHh---------------
Confidence 2 449999999999999876543 44789999 776654 3653222 23433322
Q ss_pred HhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHH
Q 012838 230 TAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGA 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~ 309 (455)
..-.|+.| +.+|..++|..|++.||.+|+. ..++.|||||||||+++|++.++
T Consensus 184 ----------------------~gl~yI~p--fDhP~I~aGqgTig~EIl~ql~---~~~~AI~vpVGGGGLiaGIat~v 236 (457)
T KOG1250|consen 184 ----------------------NGLTYIPP--FDHPDIWAGQGTIGLEILEQLK---EPDGAIVVPVGGGGLIAGIATGV 236 (457)
T ss_pred ----------------------cCceecCC--CCCchhhcCcchHHHHHHHhhc---CCCCeEEEecCCchhHHHHHHHH
Confidence 22234433 3578889999999999999972 23459999999999999999999
Q ss_pred HhcCCCceEEEEeccCChhhHHHhhH------hHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHH
Q 012838 310 ICLGLPWEVTAIALVDTIDGYKQQEK------NLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEA 383 (455)
Q Consensus 310 ~~~g~~~~vigVe~~g~~~~~~~~~~------~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a 383 (455)
++.+|.++|||||.+++...-.+... ..+..+++.++ ++.++..++.......++.+.|+|+||..+
T Consensus 237 k~~~p~vkIIGVEt~~a~~f~~sl~~g~~V~lp~i~s~Adgla-------V~~Vg~~tf~~a~~~~d~vvvV~~~ei~aa 309 (457)
T KOG1250|consen 237 KRVGPHVKIIGVETEGAHSFNASLKAGKPVTLPKITSLADGLA-------VKTVGENTFELAQKLVDRVVVVEDDEIAAA 309 (457)
T ss_pred HHhCCCCceEEEeecCcHHHHHHHhcCCeeecccccchhcccc-------cchhhHHHHHHHHhcCceEEEeccHHHHHH
Confidence 99999999999999998653322111 11223333333 344556788888888999999999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhh
Q 012838 384 CHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGL 435 (455)
Q Consensus 384 ~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~ 435 (455)
|.++..+|..++||+ .|+++|+++.. .-.-.++++||.+++|||.+...+
T Consensus 310 I~~l~edek~vvEpA-gaaaLaai~~~-~~~~lk~~~vv~ilsG~n~~~~~L 359 (457)
T KOG1250|consen 310 ILRLFEDEKMVVEPA-GAAALAAIYSG-KLNHLKGKKVVSILSGGNIDFDSL 359 (457)
T ss_pred HHHHHHhhhheeccc-hHHHHHHHHhc-cccccCCceEEeecccCCCCcccc
Confidence 999999999999997 68999999987 323357899999999999986554
No 74
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=100.00 E-value=5.2e-37 Score=316.67 Aligned_cols=294 Identities=14% Similarity=0.087 Sum_probs=205.1
Q ss_pred cCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHH-----HHhCCC-----------
Q 012838 78 HGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL-----LEDHIV----------- 141 (455)
Q Consensus 78 ~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~-----A~~~G~----------- 141 (455)
.++|||+++ ++|+ +.+|...- ...+.+||+|+|.+| |.+||||||.+.++|.. |++.|.
T Consensus 50 ~~~TPLv~~--~~ls-~~~g~~~~-~~~~~~v~~K~E~~n-P~tGSfKdRgA~~~i~~l~~~~a~~~G~l~pg~~~~~~~ 124 (404)
T cd06447 50 IIESPLLPI--PRMK-QALEKLYH-QPIKGRLLLKADSHL-PISGSIKARGGIYEVLKHAEKLALEHGLLTLEDDYSKLA 124 (404)
T ss_pred ccCCCceeh--HHHH-HHhccccc-cCcCceEEEEecCCC-CCCCChHHHHHHHHHHHHhHHHHHHhCCCCcccchhhhh
Confidence 489999999 8887 44320000 000368999999997 75699999999888753 556555
Q ss_pred ----------CEEEec--CchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHH
Q 012838 142 ----------TDLVTC--GGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSY 207 (455)
Q Consensus 142 ----------~~VVt~--G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~ 207 (455)
++||++ ||.+...+ +|+.+|++|+||||...|.. +...|+.||| |+.++.+ |++..+.
T Consensus 125 ~~~~~~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~---K~~~ira~GAeVv~v~~~-~~~a~~~---- 196 (404)
T cd06447 125 SEKFRKLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQW---KKDKLRSKGVTVVEYETD-YSKAVEE---- 196 (404)
T ss_pred hhhhhhcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHH---HHHHHHHCCCEEEEECCC-HHHHHHH----
Confidence 478853 44332222 57799999999999987654 4566899999 9999863 5543222
Q ss_pred hhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHH-cC-
Q 012838 208 ANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHL-LG- 285 (455)
Q Consensus 208 A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~-~g- 285 (455)
|+++ .+..+..|+++. ..+|...+||.|+++||++|+. .+
T Consensus 197 a~~l-------------------------------------a~~~~~~~~v~~-~n~~~~iaG~~T~g~EI~eQl~~~~~ 238 (404)
T cd06447 197 GRKQ-------------------------------------AAADPMCYFVDD-ENSRDLFLGYAVAASRLKAQLAELGI 238 (404)
T ss_pred HHHH-------------------------------------HHHCCCeEeCCC-CCchhHHhhHHHHHHHHHHHhhhccC
Confidence 2211 122223455543 4567788999999999999973 11
Q ss_pred ---CCCCCEEEEeCCCcchHHHHHHHHHhc-CCCceEEEEeccCChhhHHHhhHh----H--------HHHHHHHhcccc
Q 012838 286 ---RKRAIKFVVDAGTGTTAVGLGLGAICL-GLPWEVTAIALVDTIDGYKQQEKN----L--------ISEFKRLFGFLL 349 (455)
Q Consensus 286 ---~~~pD~vvvpvGtGgt~~Gl~~g~~~~-g~~~~vigVe~~g~~~~~~~~~~~----l--------~~~~~~~ig~~~ 349 (455)
+..||+||+|+|+||+++|++++|+++ ++.++||+||+++++....+.... + ...+++.++.
T Consensus 239 ~vD~~~Pd~VvvpvG~GGli~GIa~~lK~~~~p~~kVigVeP~~ap~~~~s~~ag~~~~~~~~~~g~~~~TiadGl~~-- 316 (404)
T cd06447 239 KVDAEHPLFVYLPCGVGGAPGGVAFGLKLIFGDNVHCFFAEPTHSPCMLLGMATGLHDKISVQDIGIDNRTAADGLAV-- 316 (404)
T ss_pred ccccCCCCEEEEecCccHHHHHHHHHHHHhcCCCCEEEEEccCCChHHHHHHHcCCCccccccccCCCccchhhhhcC--
Confidence 113678999999999999999999987 788999999999876433221100 0 0112222221
Q ss_pred cCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc----------CCCCC
Q 012838 350 KKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK----------LKQDA 419 (455)
Q Consensus 350 ~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~----------~~~g~ 419 (455)
..+....+.++++..++.+.|+|+|+.+++++|++++||++||+ +|+++|+++++.++. .-.+.
T Consensus 317 -----~~p~~~~~~~~~~~vd~~v~Vsd~ei~~a~r~La~~~gi~vepS-gAa~lAAl~~~~~~~~~~~~~~~~~~~~~~ 390 (404)
T cd06447 317 -----GRPSGLVGKLMEPLLSGIYTVEDDELYRLLAMLKDSENIEVEPS-AAAGFTGPAQVLSEAEGKRYVRLGYRMENA 390 (404)
T ss_pred -----CCcchhHHHHHHHhCCcEEEECHHHHHHHHHHHHHHcCcEEeHH-HHHHHHHHHHHHHhhhHHHhcCccccccCc
Confidence 11223345556778899999999999999999999999999996 789999999987651 12355
Q ss_pred eEEEEecCCCc
Q 012838 420 DVVMLHTGGTL 430 (455)
Q Consensus 420 ~VV~I~TGG~~ 430 (455)
+-++|.|||..
T Consensus 391 ~~~~~~~~~~~ 401 (404)
T cd06447 391 THIVWATGGSM 401 (404)
T ss_pred eEEEEccCCCC
Confidence 66889999864
No 75
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=100.00 E-value=1.1e-36 Score=316.52 Aligned_cols=303 Identities=15% Similarity=0.065 Sum_probs=210.9
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHH-----HHhCCC----------
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL-----LEDHIV---------- 141 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~-----A~~~G~---------- 141 (455)
..++|||+++ ++++ +.+|...-.. .+.+||+|+|++| |.+||||+|.+.++|.. |++.|.
T Consensus 67 ~~~~TPL~~~--~~ls-~~~~~~~~~~-~~~~v~lKlE~~n-P~tGSfKdRGA~~~i~~~~~~~A~~~G~l~~~~~~~~l 141 (431)
T TIGR02035 67 GIIESPLVEI--FNMQ-KELEKKYQQE-IPGRLLLKMDSHL-PISGSIKARGGIYEVLKHAEELALEAGLLKLDDDYSIL 141 (431)
T ss_pred CccCCCccch--HHHH-HHhhhcccCC-cCceEEEEecccC-CccCCcHHHHHHHHHHHhhHHHHHHcCCCCcCcchhhh
Confidence 5589999999 8887 4332000001 1468999999997 76799999999988864 666665
Q ss_pred -----------CEEEe--cCchhHHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHH
Q 012838 142 -----------TDLVT--CGGCQSAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKS 206 (455)
Q Consensus 142 -----------~~VVt--~G~~~sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~ 206 (455)
.+||+ +||.+...| +|+.+|++|+||||...|.. +..+++.||| |+.++.+ |++..+.
T Consensus 142 ~e~~~~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~---K~~~ir~~GAeVv~~~~~-~~~a~~~--- 214 (431)
T TIGR02035 142 AEKKFKDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQW---KKDKLRSKGVTVVEYESD-YGVAVEE--- 214 (431)
T ss_pred cchhhhhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHH---HHHHHHHcCCEEEEECCC-HHHHHHH---
Confidence 36775 344332222 57799999999999987654 4456899999 9999874 6642221
Q ss_pred HhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCc-HHHHHHHHHHHHHHHHHHHc-
Q 012838 207 YANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGD-AVALLGVFRLLQYLSQDHLL- 284 (455)
Q Consensus 207 ~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n-p~~~~G~~t~~~Ei~eq~~~- 284 (455)
|+++ .+..+..|++. + .| +....||.+++.||++|+..
T Consensus 215 -A~~l-------------------------------------a~~~~~~~~~d-~-~n~~n~~aG~~T~g~EI~eQl~~~ 254 (431)
T TIGR02035 215 -GRKN-------------------------------------ADADPMCYFVD-D-ENSRNLFLGYAVAASRLKKQFDKK 254 (431)
T ss_pred -HHHH-------------------------------------HHhcCCeEECC-C-CCcccHHhhHHHHHHHHHHhhhcc
Confidence 2222 12223345443 2 33 34458999999999999731
Q ss_pred C----CCCCCEEEEeCCCcchHHHHHHHHHhc-CCCceEEEEeccCChhhHHHhhHhH-----H-------HHHHHHhcc
Q 012838 285 G----RKRAIKFVVDAGTGTTAVGLGLGAICL-GLPWEVTAIALVDTIDGYKQQEKNL-----I-------SEFKRLFGF 347 (455)
Q Consensus 285 g----~~~pD~vvvpvGtGgt~~Gl~~g~~~~-g~~~~vigVe~~g~~~~~~~~~~~l-----~-------~~~~~~ig~ 347 (455)
+ .+.||+|++|+|+||+++|++.+|+++ +++++||+||+++++....+..... + ..+++.+
T Consensus 255 ~~~~d~~~pd~V~vp~G~GGli~Gia~~lK~~~~~~vkvi~VEp~~s~~~~~s~~~g~~~~~~~~~~g~~~~T~AdGl-- 332 (431)
T TIGR02035 255 GIVVDKEHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCMLLGVYTGLHEKISVQDIGIDNITAADGL-- 332 (431)
T ss_pred ccccccCCCCEEEEEeCcCHHHHHHHHHHHHhcCCCCEEEEEeeCCCHHHHHHHhcCCCccccccccCCCCCceeccc--
Confidence 1 025789999999999999999999987 8899999999999765432211100 0 0111122
Q ss_pred cccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhc------------C
Q 012838 348 LLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEK------------L 415 (455)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~------------~ 415 (455)
.+..+....+.+.++..++.+.|+|+|+++++++|++++||++||+ +|++++++.+++++. +
T Consensus 333 -----av~~p~~~~~~~~~~~vd~vv~VsD~ei~~a~~~L~~~egi~vEpS-saa~laa~~~l~~~~~~~~~~~~~~~~~ 406 (431)
T TIGR02035 333 -----AVGRPSGFVGRLMEPLLSGIYTVDDYTLYDLLRILAESEGKRLEPS-ALAGMEGPVRLLKYEDSYRYIEGRIGKN 406 (431)
T ss_pred -----cCCCcchhHHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCCeEcHH-HHHHHHHHHHHHhhhhhHHHHcCccccc
Confidence 2222333445556678889999999999999999999999999996 788999988776541 1
Q ss_pred CCCCeEEEEecCCCcchhhhHHHH
Q 012838 416 KQDADVVMLHTGGTLGMFGLAQRY 439 (455)
Q Consensus 416 ~~g~~VV~I~TGG~~~~~~~~~ry 439 (455)
.++.+.++|.|||..-.....++|
T Consensus 407 ~~~~~~~~~~tg~~~~p~~~~~~~ 430 (431)
T TIGR02035 407 LNNATHVVWATGGGMVPEEEMEAY 430 (431)
T ss_pred cCCCeEEEEecCCCCCCHHHHHhh
Confidence 147789999999987766655444
No 76
>KOG1395 consensus Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=304.03 Aligned_cols=346 Identities=15% Similarity=0.108 Sum_probs=249.9
Q ss_pred ceeEEeeeHHHHHHHhhh--hhhhccCCCcccchh-hccccccccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEe
Q 012838 37 GICNVRMSGEELLSRLLD--RKWALTSPDSKIHQI-KLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVR 113 (455)
Q Consensus 37 ~~~~~~~~~e~~~~~l~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKr 113 (455)
|-.--.|+||.|+..|.| ..+-....|..||+. ..+++ |++++|||+++ +||+ ++++. |++||+||
T Consensus 77 gkfgg~yvPE~L~h~l~ELek~f~~~~~d~df~ee~~eiy~-y~gRpspL~~A--kRLt-e~~q~-------ga~IylKr 145 (477)
T KOG1395|consen 77 GKFGGPYVPEALAHCLPELEKQFYTAERDEDFWEEFLEIYK-YLGRPSPLIRA--KRLT-EHCQT-------GARIYLKR 145 (477)
T ss_pred cccCCccChHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HcCCCchhHHH--HHHH-HHhCC-------CCEEEEEe
Confidence 444457899999999987 555555677888888 55554 89999999999 9998 77754 89999999
Q ss_pred CCCCCCCcccchhhhHHhhHHH---HHhCCCCEEEe-cCchh--HHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhC
Q 012838 114 DDLLHPLVNGNKARKMDALLPL---LEDHIVTDLVT-CGGCQ--SAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIY 186 (455)
Q Consensus 114 Edl~~p~~GsnK~Rkl~~~l~~---A~~~G~~~VVt-~G~~~--sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~ 186 (455)
||+|| +||||.- +.+++ |++.|++.||+ +|++| ++.| +|+++||+|+|||..++..++..|+++||.+
T Consensus 146 Edlnh--~GsHKiN---nav~QallakrlGkknviaETGAGQhGvatA~a~a~FGl~C~v~mgAed~~rqalnvfrmrll 220 (477)
T KOG1395|consen 146 EDLNH--TGSHKIN---NAVAQALLAKRLGKKNVIAETGAGQHGVATATACAKFGLDCTVYMGAEDYRRQALNVFRMRLL 220 (477)
T ss_pred cCCCc--cccCCcc---cHHHHHHHHHHhcccceeeccCCCccchHHHHHHHHhCCceEEEechhHHHHHHHHHHHHHHh
Confidence 99985 6999654 45555 68999999998 88887 2222 5789999999999998888888899999999
Q ss_pred Cc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcH
Q 012838 187 GK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDA 265 (455)
Q Consensus 187 GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np 265 (455)
|| |+.|+.+....+++..++ .+.|+.++..++|. ++ .+.+++||.
T Consensus 221 GAkV~pv~sGt~tLrda~sea----------~r~wvt~~ett~y~--------------~g--s~~gphp~p-------- 266 (477)
T KOG1395|consen 221 GAKVHPVTSGTRTLRDATSEA----------GRLWVTNSETTHYA--------------AG--SAIGPHPYP-------- 266 (477)
T ss_pred CceEeecCCCceehhcccchh----------hhhhhhhhheeeee--------------ec--ccCCCCCcH--------
Confidence 99 999998766666665543 56899877666653 33 234566652
Q ss_pred HHHHHHHHH-HHHHHHHH-H-cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhh--HHHhh-----H
Q 012838 266 VALLGVFRL-LQYLSQDH-L-LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDG--YKQQE-----K 335 (455)
Q Consensus 266 ~~~~G~~t~-~~Ei~eq~-~-~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~--~~~~~-----~ 335 (455)
..+.-++++ +.|-..|. + +| ..||.||.|+|+|++.+|++.-|. .+..++++||++.+.... ..+.. .
T Consensus 267 t~vr~fhsvIg~Et~~Q~me~~g-~~PD~vvaCvGGGSN~~Glf~pF~-~dk~v~~igveaagdg~dtp~hsatltagd~ 344 (477)
T KOG1395|consen 267 TVVRTFHSVIGKETKIQQMEKFG-KLPDAVVACVGGGSNSAGLFSPFI-RDKSVGMIGVEAAGDGVDTPKHSATLTAGDV 344 (477)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhC-CCCCeEEEeccCCCccccccchhh-ccchhheeeeeecccccCCcchhceeecccc
Confidence 455566554 77776655 4 55 689999999999999999999998 456799999998764221 11100 0
Q ss_pred hHHHHHH-----HHhcccccC------CCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHH
Q 012838 336 NLISEFK-----RLFGFLLKK------SSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAW 404 (455)
Q Consensus 336 ~l~~~~~-----~~ig~~~~~------~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaal 404 (455)
....+.. +..|...+| +.++.++++.-++-+.-.-+.+.++|.|.+++.+.+++.|||..-|. +..|+
T Consensus 345 Gv~hG~~ty~lq~~dGqi~~phsIsAGLdYpGvgPels~~k~~grae~isitd~eclegfk~~srlEGIIPAlE-ssHAv 423 (477)
T KOG1395|consen 345 GVFHGVTTYVLQDTDGQIFDPHSISAGLDYPGVGPELSHLKETGRAEFISITDAECLEGFKQLSRLEGIIPALE-SSHAV 423 (477)
T ss_pred cccccceeeeeeccCCccccCCccccCCCCCCCChhHHHHHhcCceeEEecChHHHHHHHHHHHHhcccccCCc-hhhHH
Confidence 0011110 111211111 12222222222333333455789999999999999999999998876 45889
Q ss_pred HHHHHHhhhcCCCCCeEEEEecC-CCcchhhhH
Q 012838 405 EMATLLSDEKLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 405 Agl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
++...+++. +++++.||+-.|| |..|+....
T Consensus 424 a~~~~lck~-l~~~k~ivi~~sGrGdkDvqS~~ 455 (477)
T KOG1395|consen 424 AGEAELCKT-LPEDKVIVINISGRGDKDVQSVA 455 (477)
T ss_pred HHHHHhccc-cCCCcEEEEEecCCCCchHHHHH
Confidence 998877764 6788999999999 999987744
No 77
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.
Probab=100.00 E-value=2.3e-36 Score=312.45 Aligned_cols=294 Identities=13% Similarity=0.033 Sum_probs=202.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHH--HhCC----------------
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLL--EDHI---------------- 140 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A--~~~G---------------- 140 (455)
.+|||+++ ++|+ +.+| ..+||+|+|++++| +||||+|++.+.+..+ .+.|
T Consensus 40 ~~TPL~~~--~~L~-~~~g--------~~~v~lK~E~~q~~-tGSFK~RGa~~~v~~l~~~~~g~~~~~~~~~~l~~~~~ 107 (396)
T TIGR03528 40 QPTPLAEL--DNLA-KHLG--------VGSILVKDESYRFG-LNAFKVLGGSYAIGKYLAEKLGKDISELSFEKLKSNEI 107 (396)
T ss_pred cCCCCcch--HHHH-HHhC--------CCcEEEeeCCCCCC-cCChHHHHHHHHHHHHHHHHhCCCcccccHHHhhhHHH
Confidence 69999999 8888 4442 26899999999877 8999999988888764 2222
Q ss_pred -----CCEEEecCchhHHHH-----HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhh
Q 012838 141 -----VTDLVTCGGCQSAHA-----TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYAN 209 (455)
Q Consensus 141 -----~~~VVt~G~~~sNha-----~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~ 209 (455)
..+||++++ +||+ +|+.+|++|+||||...+.. ++..++.||| |+.++.+ |++..+. |+
T Consensus 108 ~~~~~~~~vv~aSs--GN~g~alA~~aa~~Gi~~~IvvP~~~~~~---K~~~ir~~GAeVi~~~~~-~~~a~~~----a~ 177 (396)
T TIGR03528 108 REKLGDITFVTATD--GNHGRGVAWAANQLGQKSVVYMPKGSAQI---RLENIRAEGAECTITDLN-YDDAVRL----AW 177 (396)
T ss_pred HhhccCcEEEEECc--cHHHHHHHHHHHHcCCCEEEEEeCCCcHH---HHHHHHhcCCEEEEECCC-HHHHHHH----HH
Confidence 237886432 4555 46799999999999887643 4456899999 9999864 5542222 22
Q ss_pred hhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecC----CCCc--HHHHHHHHHHHHHHHHHHH
Q 012838 210 LVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNE----GAGD--AVALLGVFRLLQYLSQDHL 283 (455)
Q Consensus 210 ~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~----g~~n--p~~~~G~~t~~~Ei~eq~~ 283 (455)
+++.+ . ..|+++. ++.| |..++||.|+++||++|+.
T Consensus 178 ~~a~~-------------------------------------~-g~~~v~~~~~~~~~~~~~~~i~G~~Tig~EI~eQl~ 219 (396)
T TIGR03528 178 KMAQE-------------------------------------N-GWVMVQDTAWEGYEKIPTWIMQGYGTLALEALEQLK 219 (396)
T ss_pred HHHHh-------------------------------------c-CcEeeccccccccccCchHHHHHHhHHHHHHHHHHh
Confidence 22111 1 1233321 2323 6677999999999999973
Q ss_pred -cCCCCCCEEEEeCCCcchHHHHHHHHHh-cCCC-ceEEEEeccCChhhHHHhhH---hH--HHHHHHHhcccccCCCcC
Q 012838 284 -LGRKRAIKFVVDAGTGTTAVGLGLGAIC-LGLP-WEVTAIALVDTIDGYKQQEK---NL--ISEFKRLFGFLLKKSSLN 355 (455)
Q Consensus 284 -~g~~~pD~vvvpvGtGgt~~Gl~~g~~~-~g~~-~~vigVe~~g~~~~~~~~~~---~l--~~~~~~~ig~~~~~~~~~ 355 (455)
.++..||+||+|+|+||++.|++.+|++ +++. ++|+|||++++...+.+... .. +++-..++.++ +..+
T Consensus 220 ~~~~~~pD~vvvpvG~Ggl~~gi~~~~~~~~~~~~p~vi~Vep~~a~~l~~s~~~~~g~~~~~~g~~~Tiadg---l~~~ 296 (396)
T TIGR03528 220 EQGVEKPTHVFLQAGVGSFAGAVQGYFASAYGEERPITVIVEPDAADCLYRSAIADDGKPHFVTGDMATIMAG---LACG 296 (396)
T ss_pred hcCCCCCCEEEEcCCcchHHHHHHHHHHHhcCCCCCEEEEEccCCCchHHHHHHhcCCCEEEeCCCccceecc---cccC
Confidence 2334699999999999999999998954 4544 59999999987665433211 00 01000112211 1111
Q ss_pred ccccccchheeeccCcEEEeCCHHHHHHHHHHHH----HhCCcccccchHHHHHHHHHHhh---------h-cCCCCCeE
Q 012838 356 EVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQ----LTGILVDPVYTLAAWEMATLLSD---------E-KLKQDADV 421 (455)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~----~eGI~veP~ysgaalAgl~~l~~---------~-~~~~g~~V 421 (455)
.+....+.+++++.++.+.|+|+|+.++++.|++ ++++++||+ +|+++|++..+.. + .+.++++|
T Consensus 297 ~p~~~~~~~~~~~~d~~v~VsD~ei~~a~r~La~~~~~~~~~~~eps-ga~~~Aalaa~~~~~~~~~~~~~~~~~~~~~v 375 (396)
T TIGR03528 297 EPNTIGWEILRDYASQFISCPDWVAAKGMRILGNPLKGDPRVISGES-GAVGTGLLAAVMTNPDYKELREKLQLDKNSRV 375 (396)
T ss_pred CccHHHHHHHHHhCCeEEEECHHHHHHHHHHHhcccCCCCceeecCc-HHHHHHHHHHHHhCchhHHHHHhcCCCCCCEE
Confidence 2233456667888999999999999999999998 679999996 6778755533221 1 24458899
Q ss_pred EEEecCCCcchhhhH
Q 012838 422 VMLHTGGTLGMFGLA 436 (455)
Q Consensus 422 V~I~TGG~~~~~~~~ 436 (455)
|+|+||||.+...+.
T Consensus 376 v~i~tggn~d~~~~~ 390 (396)
T TIGR03528 376 LLISTEGDTDPDNYR 390 (396)
T ss_pred EEEECCCCCCHHHHH
Confidence 999999999987654
No 78
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=100.00 E-value=1.4e-36 Score=303.14 Aligned_cols=285 Identities=21% Similarity=0.204 Sum_probs=196.3
Q ss_pred cCCCCCcccccC--CCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEec--CchhHH
Q 012838 78 HGGGPLGGISFL--NNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTC--GGCQSA 153 (455)
Q Consensus 78 ~g~TPL~~~~~~--~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~--G~~~sN 153 (455)
.++|||+++ + .++ ...+.+||+|+|++| | +||||+|++.+++.+|+++|.++|+.+ ||.+..
T Consensus 5 ~~~TPl~~~--~~~~~~----------~~~~~~i~~K~E~~~-p-tgs~K~R~a~~~l~~a~~~~~~~vv~assGN~g~a 70 (306)
T PF00291_consen 5 IGPTPLVRL--PSRLLS----------ELGGANIYLKREDLN-P-TGSFKDRGAYYLLSRAKEKGGRTVVGASSGNHGRA 70 (306)
T ss_dssp SSSS-EEEE--HEHHHH----------HCTTSEEEEEEGGGS-T-TSBTHHHHHHHHHHHHHHTTTSEEEEESSSHHHHH
T ss_pred CcCCCEEEC--ccccch----------hccCCeEEEEECCCC-C-cCCcccccchhhhhhccccccceeeeeccCCceeh
Confidence 489999997 4 222 112789999999997 8 899999999999999999999998853 333222
Q ss_pred HH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 154 HA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 154 ha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
.+ +|..+|++|++|||...++ .+..+++.+|+ |+.++.. ++.........++ +.+
T Consensus 71 ~A~~a~~~g~~~~i~~p~~~~~---~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~~~~~-----------------~~~-- 127 (306)
T PF00291_consen 71 LAYAAARLGLKCTIVVPEDVSP---EKLKQMRALGAEVILVPGD-VEGAFDDAQELAK-----------------ERA-- 127 (306)
T ss_dssp HHHHHHHHTCEEEEEEETTSHH---HHHHHHHHTTCEEEEESST-HHHHHHHHHHHHH-----------------HHH--
T ss_pred hhhhhhhccccceeeecccccc---ccccceeeecceEEEcccc-ccccccccccccc-----------------ccc--
Confidence 22 4569999999999987543 46677899999 9888764 3221111111111 000
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
..+ ...+.. ++.+ .||....||.+++.||.+|+. ..++|.||+|+||||+++|++.+|+.
T Consensus 128 --------------~~~-~~~~~~--~~~~-~~~~~~~g~~~~~~Ei~~q~~--~~d~d~vvv~~GtGg~~~Gi~~~~~~ 187 (306)
T PF00291_consen 128 --------------ELL-SPFNGE--LNQY-NNPNVIAGYATIGLEIYEQLG--KPDPDYVVVPVGTGGTAAGIAAGLKE 187 (306)
T ss_dssp --------------HHH-HHSTTE--ESTT-TSHHHHHHHHHHHHHHHHHHT--TESESEEEEEESSSHHHHHHHHHHHH
T ss_pred --------------ccc-cccccc--cCcc-cchhhhhhhhhcchhcccccc--cccceEEEecCCchhHHHHHHhhhhh
Confidence 000 111111 3333 789999999999999999973 22345599999999999999999998
Q ss_pred --cCCCceEEEEeccCChhhHHHhhHhH---H---HHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHH
Q 012838 312 --LGLPWEVTAIALVDTIDGYKQQEKNL---I---SEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEA 383 (455)
Q Consensus 312 --~g~~~~vigVe~~g~~~~~~~~~~~l---~---~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a 383 (455)
. +.++|+||++.++........... . ..+ ..++. ..+......+++++++.+..+.|+|+|++++
T Consensus 188 ~~~-~~~~vigv~~~~~~~~~~~~~~g~~~~~~~~~~~-~gl~~-----~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a 260 (306)
T PF00291_consen 188 LIL-PPVRVIGVEPEGSDPLYRSFKAGKPIRLPGESTI-AGLGV-----PMPFPGELDLELIDEYVGDVVGVSDEEALEA 260 (306)
T ss_dssp HCH-TTSEEEEEEETTGHHHHHHHHHTSCEHSSCHHSS-TGGTS-----SSCTTTTHHHHHHHHETEEEEEEEHHHHHHH
T ss_pred hhc-ccccceeeeccCCccccccccccccccccceeee-ecccC-----CccchhhhhhhhhhhccccccccchHHHHHH
Confidence 7 899999999988754332111100 0 001 01211 1111223456678888888899999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHhhhc-C--CCCCeEEEEecC
Q 012838 384 CHRIAQLTGILVDPVYTLAAWEMATLLSDEK-L--KQDADVVMLHTG 427 (455)
Q Consensus 384 ~r~La~~eGI~veP~ysgaalAgl~~l~~~~-~--~~g~~VV~I~TG 427 (455)
++++++++||++||+ +++++++++++.++. + +++++||+||||
T Consensus 261 ~~~l~~~~gi~~~p~-~a~a~aa~~~~~~~~~~~~~~~~~vv~v~tG 306 (306)
T PF00291_consen 261 IRELAEREGILVEPS-SAAALAAALKLAERGSLAPPAGKRVVVVLTG 306 (306)
T ss_dssp HHHHHHHHSB-B-HH-HHHHHHHHHHHHHHTGCHTTTTSEEEEEE-B
T ss_pred HHHHHHHcCcEEcHH-HHHHHHHHHHHHHhCCccccCCCeEEEEcCC
Confidence 999999999999997 567888888876653 3 478999999998
No 79
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=288.26 Aligned_cols=280 Identities=14% Similarity=0.100 Sum_probs=212.7
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHH-hCCCCEEEecCchhHHHHH-
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHAT- 156 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~-~~G~~~VVt~G~~~sNha~- 156 (455)
..||.+.. .++. +.+ |.+||+|+|.+|. +|+||.|++.+.+..+. ++..+.|||.++ +||+.
T Consensus 24 hkTpVlTS--~~ln-~~~---------g~~vfFKcE~fQK--tGaFKfRGAlNav~~l~~ek~~kgvithSS--GNHaqA 87 (323)
T KOG1251|consen 24 HKTPVLTS--ENLN-EKV---------GRHVFFKCENFQK--TGAFKFRGALNAVSSLKAEKRAKGVITHSS--GNHAQA 87 (323)
T ss_pred ccCceech--hhHH-HHh---------hhheEeehhhhhh--ccceehhhhHHHHHHhhHhhhcCceEeecC--CcHHHH
Confidence 36788777 7776 333 6799999999984 69999999988887765 667789998655 56773
Q ss_pred ----HHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHh
Q 012838 157 ----AVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTA 231 (455)
Q Consensus 157 ----Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~ 231 (455)
|...|++|+|+||.+.|..+ +.-++.||+ |+++++. .++|+.+.+ ++
T Consensus 88 lalaAk~~giPa~IVvP~~AP~~K---v~a~~~Yga~ii~~e~~-~~sRE~va~----~l-------------------- 139 (323)
T KOG1251|consen 88 LALAAKILGIPATIVVPKDAPICK---VAATRGYGANIIFCEPT-VESRESVAK----DL-------------------- 139 (323)
T ss_pred HHHHHHhcCCCeEEEecCCChHHH---HHHHHhcCceEEEecCc-cchHHHHHH----HH--------------------
Confidence 44999999999999987654 345899999 9999875 345555432 22
Q ss_pred hhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHh
Q 012838 232 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAIC 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~ 311 (455)
.++... |.||.. .+|....|..|+++|+.||. +..|.+|||+||||+++|++.+.+.
T Consensus 140 -----------------tee~g~-~~i~Py-~~p~vIaGqgTiA~ElleqV----g~iDalfvpvgGGGllSgvAlaa~~ 196 (323)
T KOG1251|consen 140 -----------------TEETGY-YLIHPY-NHPSVIAGQGTIALELLEQV----GEIDALFVPVGGGGLLSGVALAAKS 196 (323)
T ss_pred -----------------HHhcCc-EEeCCC-CCcceeeccchHHHHHHHhh----CccceEEEeecCcchhhHHHHHHhc
Confidence 112222 334332 34666677888999999997 4799999999999999999999999
Q ss_pred cCCCceEEEEeccCChhhHHHhhHh-H-----HHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHH
Q 012838 312 LGLPWEVTAIALVDTIDGYKQQEKN-L-----ISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACH 385 (455)
Q Consensus 312 ~g~~~~vigVe~~g~~~~~~~~~~~-l-----~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r 385 (455)
+.|+++|++|||++..+...+.... + ...+++..... .+++.+|.+++++.++.++|+|+|+.++++
T Consensus 197 l~P~i~vy~veP~~a~d~~qsf~~g~I~~l~tp~TIADG~r~~-------~lG~~t~pIir~~vddi~Tv~e~Ei~~~lk 269 (323)
T KOG1251|consen 197 LKPSIEVYAVEPEAADDGQQSFLKGKIVHLDTPKTIADGVRTS-------HLGPLTWPIIRDLVDDILTVSEDEIKEALK 269 (323)
T ss_pred cCCCcEEEEecCcccchHHHHHhcCCeEecCCchhhhhhhhhc-------cccccchHHHHHHhhhheeecHHHHHHHHH
Confidence 9999999999999877655443221 1 12233322211 134567888999999999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhh
Q 012838 386 RIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGL 435 (455)
Q Consensus 386 ~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~ 435 (455)
.+|++.++.+||+ ++.+|||++....+ ...+++.+|+||||.|+..+
T Consensus 270 ~~~ermK~~vEPT-a~lgfAavl~~k~~--~~~K~igIiLsGGNVD~~~~ 316 (323)
T KOG1251|consen 270 LIWERMKVVVEPT-AALGFAAVLSHKFA--LNIKRIGIILSGGNVDLNSW 316 (323)
T ss_pred HHHHHHheeeccc-hhHHHHHHHhhhHH--hccCceEEEEeCCcccccch
Confidence 9999999999996 67899999865432 23789999999999998763
No 80
>COG0498 ThrC Threonine synthase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=283.00 Aligned_cols=331 Identities=19% Similarity=0.151 Sum_probs=229.9
Q ss_pred CCceeEEeeeHHHHH--HHhhh-----hhhhcc--CCCcccchhhccccccccCCCCCcccccCCCCCCcCCCcccccCC
Q 012838 35 PQGICNVRMSGEELL--SRLLD-----RKWALT--SPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDE 105 (455)
Q Consensus 35 ~~~~~~~~~~~e~~~--~~l~~-----~~~~~~--~~~~~~~~~~~~~~~~~~g~TPL~~~~~~~l~~~~~g~~~~~~~~ 105 (455)
-.+.+++.|.+..+. +++.. ..|... .|..+++...+ -++.||+++. +++. ..+|. .
T Consensus 27 cGl~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~l-----~eg~tp~~~~--~~~~-~~l~~------~ 92 (411)
T COG0498 27 CGLFLPAEYPYFSLEEIDKLLGLSYPELAWRYLELLPVGEIPAVSL-----GEGGTPLYKA--PALA-APLGV------L 92 (411)
T ss_pred CCcccccccCccchhhhhhhhcccccchHHHHHHHCCCCCcchhhh-----hhccCccccC--cccc-hhhcc------C
Confidence 466777877776543 22221 344333 23223332222 3599999998 8887 44432 0
Q ss_pred CceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEE--ecCchhH-HHHHHHHhCCeEEEEecCCCccccchhhHH
Q 012838 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLV--TCGGCQS-AHATAVERGLKSHLLLRGEQPQILTGYNLI 182 (455)
Q Consensus 106 g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VV--t~G~~~s-Nha~Aa~~Gl~~~iv~~~~~~~~~~~~~~~ 182 (455)
+.++|+|.|.+| | |||||||.+..++..+.+.|..+|+ |+|+++. -++++++.|++|+|++|.... ..++..+
T Consensus 93 ~~~lyvk~~~~n-P-T~SFKDrg~~~~~~~~~~~g~~~I~~ASSGnTgAs~aaya~rag~~v~Vl~P~g~v--s~~k~~q 168 (411)
T COG0498 93 NDNLYVKELGHN-P-TGSFKDRGMTVLVSLAKELGAKTILCASSGNTGASAAAYAARAGLKVFVLYPKGKV--SPGKLAQ 168 (411)
T ss_pred CcceehhhhccC-C-CcchhhhhHHHHHHHHHHhcCCEEEEeCCchHHHHHHHHhccCCCeEEEEecCCCC--CHHHHHH
Confidence 246999999997 8 8999999999999999999954555 4787762 233677999999999998732 2246678
Q ss_pred HHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeEEEecCC
Q 012838 183 STIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEG 261 (455)
Q Consensus 183 ~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 261 (455)
|..+|+ ++.|.+. +|+..+..+. +.+..+-.| ...
T Consensus 169 ~~~~ga~~i~v~G~-fDda~~~vk~-----------------------------------------~~~~~~~~~--~~n 204 (411)
T COG0498 169 MLTLGAHVIAVDGN-FDDAQELVKE-----------------------------------------AANREGLLS--AVN 204 (411)
T ss_pred HHhcCCEEEEEcCc-HHHHHHHHHH-----------------------------------------HHhhCCcee--ecc
Confidence 999999 9999875 7754443321 111111122 334
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCC------CceEEEEeccCChhhHHHhhH
Q 012838 262 AGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGL------PWEVTAIALVDTIDGYKQQEK 335 (455)
Q Consensus 262 ~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~------~~~vigVe~~g~~~~~~~~~~ 335 (455)
..||...+|++++++||.+|+ +|..||+|+||+|+||++.|+++||++.-+ .+++.+||+++..........
T Consensus 205 siNp~rlegq~t~~fe~~~ql--~~~~p~~v~vPvGn~gni~a~~~g~~~~~~~g~i~~~p~~~~vqaeg~~p~~~~~~~ 282 (411)
T COG0498 205 SINPYRLEGQKTYAFEIAEQL--GWKAPDHVVVPVGNGGNLLAIYKGFKEGLPIGKIDKAPNMNGVQAEGFSPGVYAWKE 282 (411)
T ss_pred ccCHHHhhhhhhhHhHHHHHh--CCCCCCeEEEeCCchHHHHHHHHHHHhcccccchhcCchhhhhhHhhccchhhhccc
Confidence 578999999999999999996 667899999999999999999999997422 578889999885432221111
Q ss_pred h--HHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhh
Q 012838 336 N--LISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDE 413 (455)
Q Consensus 336 ~--l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~ 413 (455)
. ....++..+... .|.++ +..+..+++..+....|+|+|++++++++++++|+++||. ||+++++++++.++
T Consensus 283 ~~~~~~T~a~am~I~-~p~n~----~r~l~a~~es~g~~~~vsdeEi~~a~~~l~~~eG~~~eP~-sA~ava~l~k~~~~ 356 (411)
T COG0498 283 GRETPETIAPAMDIG-NPSNW----ERALFALRESGGLAVAVSDEEILEAIKLLAEREGILIEPH-SAVAVAALLKLREK 356 (411)
T ss_pred ccccccccccccccC-CCCCH----HHHHHHHHhcCCceEEeCHHHHHHHHHHHHHhCCcccCcc-HHHHHHHHHHHHHh
Confidence 0 111121211110 12222 2233345555677889999999999999999999999997 79999999998765
Q ss_pred cCCCCCeEEEEecC-CCcchhhh
Q 012838 414 KLKQDADVVMLHTG-GTLGMFGL 435 (455)
Q Consensus 414 ~~~~g~~VV~I~TG-G~~~~~~~ 435 (455)
.+.+++++|++.|| |+......
T Consensus 357 ~i~~~~~vV~v~Tg~~~K~~~~v 379 (411)
T COG0498 357 IIDPDETVVLVLTGHGLKFPDTV 379 (411)
T ss_pred hcCCCCeEEEEecCCcccChhHH
Confidence 45668899999999 67776664
No 81
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=275.79 Aligned_cols=272 Identities=16% Similarity=0.099 Sum_probs=199.1
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC-----CEEE--ecCchh
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLV--TCGGCQ 151 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~-----~~VV--t~G~~~ 151 (455)
|+|||+.+ .+++ . |. .++||+|.|.+| | +||.|||.+..|+.+|+..|. ++|| |+||++
T Consensus 51 G~TPlv~l--n~i~-~--g~-------~~~i~~K~E~~~-p-~~SvKdRia~sMi~~Ae~~G~i~pg~stliEpTSGNtG 116 (362)
T KOG1252|consen 51 GNTPLVKL--NKIA-G--GC-------VARIAAKLEYMN-P-GGSVKDRIAWSMIEDAEKKGLITPGKSTLIEPTSGNTG 116 (362)
T ss_pred CCCceEEe--cccc-C--Cc-------cceEEEEeeecC-C-cccHHHHHHHHHHHHHHHcCCccCCceEEEecCCCchH
Confidence 99999999 7774 2 21 579999999996 8 799999999999999999886 5677 789999
Q ss_pred HHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCc-hhhHHHHHHHHhhhhhcCCCCccchhhhhHHH
Q 012838 152 SAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTH-YAHRIEMLKSYANLVAGNNGDVVWCNEIFEAS 228 (455)
Q Consensus 152 sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~-~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~ 228 (455)
+..| .|+..|++|+++||+..+.+ +..+++.||+ |+.++... ++..+.+..
T Consensus 117 igLA~~~a~~Gyk~i~tmP~~ms~E---k~~~l~a~Gaeii~tp~a~~~~~~e~ai~----------------------- 170 (362)
T KOG1252|consen 117 IGLAYMAALRGYKCIITMPEKMSKE---KRILLRALGAEIILTPPAAGMKGPESAIG----------------------- 170 (362)
T ss_pred HHHHHHHHHcCceEEEEechhhhHH---HHHHHHHcCCEEEecChHHccCChHHHHH-----------------------
Confidence 8888 58899999999999987654 3456899999 99987531 121111111
Q ss_pred HHhhhhhccccccccccccccccCCeEEEecCCCCcHH-HHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHH
Q 012838 229 LTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAV-ALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~-~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
.+.++.++.++.| +.+|+.||- ...+|.+++.|||+|+. ..+|.||.++|||||++|+.+
T Consensus 171 ---------------~a~~l~~~~pna~-~l~Qf~np~Np~~hy~ttg~EI~~q~~---g~vDi~V~gaGTGGTitgvGR 231 (362)
T KOG1252|consen 171 ---------------KAEELLNKTPNAY-ILDQFHNPGNPLAHYETTGPEIWRQLD---GKVDIFVAGAGTGGTITGVGR 231 (362)
T ss_pred ---------------HHHHHHHhCCChH-HHHHhcCCCCcccccccccHHHHHHhc---CCCCEEEeccCCCceeechhH
Confidence 1122233445554 345555532 23689999999999972 479999999999999999999
Q ss_pred HHHhcCCCceEEEEeccCChhh-HHHhhH--hHHHHHHHHhcccccCCCcCccccccchheeeccCcEEEeCCHHHHHHH
Q 012838 308 GAICLGLPWEVTAIALVDTIDG-YKQQEK--NLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEAC 384 (455)
Q Consensus 308 g~~~~g~~~~vigVe~~g~~~~-~~~~~~--~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~ 384 (455)
++++.+++++|++|++.++.-. +..... ..+ +.+|.+++|.. ++....+..+.+.++|+..+.
T Consensus 232 ylke~~~~~kVv~vdp~~S~~~~~~~~g~~~~~I----~GIGyg~~p~~----------ld~~~vd~~~~~~~d~A~~~A 297 (362)
T KOG1252|consen 232 YLKEQNPNIKVVGVDPQESIVLSGGKPGPTFHKI----QGIGYGFIPTT----------LDTKLVDEVLKVSSDEAIEMA 297 (362)
T ss_pred HHHHhCCCCEEEEeCCCcceeccCCCCCCCccce----eccccCcCccc----------cchHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999987531 111111 112 23455444422 234445567788999999999
Q ss_pred HHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEE
Q 012838 385 HRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVML 424 (455)
Q Consensus 385 r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I 424 (455)
++|+.+|||+++++ ||++++++++++++.-.+++-||++
T Consensus 298 r~La~eeGll~G~S-SGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 298 RRLALEEGLLVGIS-SGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred HHHHHhhCeeeccc-chHHHHHHHHHHhccccCCcEEEEE
Confidence 99999999999974 7888888888876533334445555
No 82
>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.1e-30 Score=247.18 Aligned_cols=284 Identities=16% Similarity=0.071 Sum_probs=204.3
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCC----CEEE--ecCchhH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLV--TCGGCQS 152 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~----~~VV--t~G~~~s 152 (455)
|+|||+++ ..|+ + .. |++||.|.|.+| | .||-|||-+.+++..|++.|+ ..|+ |+|+++.
T Consensus 48 GnTpliri--~sLs-~--------aT-GcnIlaK~Ef~N-P-ggS~KDRvAl~iir~Aee~GkL~~gg~v~EGtaGsTgI 113 (391)
T KOG1481|consen 48 GNTPLIRI--NSLS-N--------AT-GCNILAKAEFLN-P-GGSVKDRVALYIIRTAEEKGKLVRGGTVVEGTAGSTGI 113 (391)
T ss_pred CCCceEEe--eccc-c--------cc-ccchhhhhhccC-C-CCChhhhhHHHHHHHHHHcCCcccCceEEecCCCccch
Confidence 89999999 8888 3 22 899999999996 9 699999999999999999997 3454 6788876
Q ss_pred HHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHH
Q 012838 153 AHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLT 230 (455)
Q Consensus 153 Nha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~ 230 (455)
..| +|..+|++|+|+||.+++.. +..+++.+|| |..|+.....+....... |.+-+.
T Consensus 114 slA~v~~a~Gyk~~I~mPddqs~e---K~~ile~LGA~V~rV~pa~i~dp~~yvn~-Arr~an----------------- 172 (391)
T KOG1481|consen 114 SLAHVARALGYKCHIYMPDDQSQE---KSDILEFLGAEVHRVPPAPIVDPNHYVNQ-ARRAAN----------------- 172 (391)
T ss_pred hHHHhhhhcCcceEEECCChHHHH---HHHHHHHhcceeeecCCcCccChhHHHHH-HHHHhh-----------------
Confidence 666 78899999999999987654 3455799999 998876544443333221 222111
Q ss_pred hhhhhccccccccccccccc--cCCeEEEecCCCCcHHH-HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHH
Q 012838 231 AQKSRASCLGQMDAHKGIDN--CRKKVLIVNEGAGDAVA-LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGL 307 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~--~~~~~y~ip~g~~np~~-~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~ 307 (455)
++.+ .+.+-| ...|..|+.. ..+|.++|.|||.|.. ...|.+++.+|||||++|+.+
T Consensus 173 ----------------~~~~~~ngi~g~-fAdQFeN~AN~~aHyetTGPEIw~Qtk---GniDaFia~~GTGGTiaGVsk 232 (391)
T KOG1481|consen 173 ----------------ETPNASNGIRGW-FADQFENVANWLAHYETTGPEIWHQTK---GNIDAFIAGTGTGGTIAGVSK 232 (391)
T ss_pred ----------------hcccccCCcccc-hhhhhcCHHHHHHHhcCcCcHHHHhhc---CCcceEEeccCCCcchHHHHH
Confidence 1110 111222 2345556543 5789999999999974 479999999999999999999
Q ss_pred HHHhcCCC-ceEEEEeccCChhhH-------HHhhH-------hHHHHHHHHhcccccCCCcCccccccchheeeccCcE
Q 012838 308 GAICLGLP-WEVTAIALVDTIDGY-------KQQEK-------NLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRPRK 372 (455)
Q Consensus 308 g~~~~g~~-~~vigVe~~g~~~~~-------~~~~~-------~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (455)
.+++..+. +.+.-.+|-|+--+- ...++ ...+.+.+.+|.+. + ..++++.+++.|+.
T Consensus 233 yLkek~~~~v~~~laDPpGSGlYnkV~~GVmy~~~e~eG~r~r~q~dti~EGIGinR-------i-T~Nf~m~~~liD~a 304 (391)
T KOG1481|consen 233 YLKEKSDGRVAVFLADPPGSGLYNKVNYGVMYDHIETEGTRRRNQVDTITEGIGINR-------I-TGNFQMAEDLIDDA 304 (391)
T ss_pred HHhhcCCCceEEEEeCCCCCchhhhhhhhhhhhhhhhcCcccCCCcchhhhcccccc-------c-ccccccchhhhhhh
Confidence 99987653 677777776652110 01110 11233444444322 1 24677788889999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC
Q 012838 373 FGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG 427 (455)
Q Consensus 373 ~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG 427 (455)
+.++|++.+++.+.|...+|+|++. +|+....++.++++ .+++|.+||.|+|-
T Consensus 305 ~rv~Deqai~Msr~Ll~~dGLFvGs-Ssa~N~VaAv~vAk-~LgpG~~iVtilCD 357 (391)
T KOG1481|consen 305 MRVTDEQAINMSRYLLDNDGLFVGS-SSALNCVAAVRVAK-TLGPGHTIVTILCD 357 (391)
T ss_pred eecChHHHHHHHHHhhhcCceEecc-hhhHHHHHHHHHHH-hcCCCceEEEEEeC
Confidence 9999999999999999999999995 46766666666765 47889999999864
No 83
>COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) [General function prediction only]
Probab=99.91 E-value=4e-23 Score=201.20 Aligned_cols=313 Identities=17% Similarity=0.121 Sum_probs=197.0
Q ss_pred ccCCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHH---HHhCCCCEEEe-cCchh-
Q 012838 77 KHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL---LEDHIVTDLVT-CGGCQ- 151 (455)
Q Consensus 77 ~~g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~---A~~~G~~~VVt-~G~~~- 151 (455)
+|+||||+++ .+|. +.||. .++||.|.|+.. | +||||.-. .|++ |+..|+++|+| +|++|
T Consensus 75 ~gRPTPL~RA--~~LE-~~L~t-------parIYyK~Eg~t-p-tGSHKiNT---AlAqaYyak~eg~~rl~TETGAGQW 139 (432)
T COG1350 75 IGRPTPLIRA--KNLE-EALGT-------PARIYYKYEGVT-P-TGSHKINT---ALAQAYYAKKEGAKRLTTETGAGQW 139 (432)
T ss_pred hCCCCchhhh--hhHH-HHhCC-------CcEEEEEecccC-C-CCCCCcch---HHHHHHHHHhcCceeeecccCCchH
Confidence 6899999999 9998 77775 689999999996 7 79997555 4555 68999999998 88886
Q ss_pred -HHHH-HHHHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcC---CCCccch-hhh
Q 012838 152 -SAHA-TAVERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGN---NGDVVWC-NEI 224 (455)
Q Consensus 152 -sNha-~Aa~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~---~g~~~w~-~~~ 224 (455)
|+.+ +|+.+|++|+|||-...-..+.-...+|++||+ |+.-|.. .++ .-+ +.++++ +|+.... .+.
T Consensus 140 GsAlslA~alf~lk~~V~Mvr~Sy~qKpyRk~lM~~yGa~V~pSPS~-~Te---~Gr---k~l~e~p~hPGSLGIAISEA 212 (432)
T COG1350 140 GSALSLAAALFGLKATVFMVRVSYYQKPYRKYLMELYGAEVVPSPSE-LTE---FGR---KILKEDPDHPGSLGIAISEA 212 (432)
T ss_pred HHHHHHHHHHhCceeEEEEEehhhhcchHHHHHHHHhCCeecCCCcc-hhH---HHH---HHHhcCCCCCchhHHHHHHH
Confidence 3333 577999999999954321122223456899999 8876653 222 111 123333 2222211 122
Q ss_pred hHHHHHhhhhhccccccccccccccccCCeEEEecCCCCcHHHHHHHHHH-HHHHHHHHH-cCCCCCCEEEEeCCCcchH
Q 012838 225 FEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLGVFRL-LQYLSQDHL-LGRKRAIKFVVDAGTGTTA 302 (455)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~np~~~~G~~t~-~~Ei~eq~~-~g~~~pD~vvvpvGtGgt~ 302 (455)
++.. + ..+..-|.. |+--..+.=++|+ |+|..+|++ .+ ..||++|-|||||+++
T Consensus 213 iE~a-------------------l-~~~~~kY~l---GSVlnhvllhQTViGlEakkQle~~~-e~PDv~igcvGGGSNf 268 (432)
T COG1350 213 IEYA-------------------L-KNENTKYSL---GSVLNHVLLHQTVIGLEAKKQLEQAG-EDPDVIIGCVGGGSNF 268 (432)
T ss_pred HHHH-------------------H-hCCCceecc---hhHHHHHHHHHHHHhHHHHHHHHhcC-CCCCEEEEeccCCCcc
Confidence 2211 1 122233432 2222223334554 899999985 55 5799999999999999
Q ss_pred HHHHHHHHh--c-CC-CceEEEEeccCChhhHHH-----h--hHhHHHHH-HHHhcccccCCCcCccccc-------cch
Q 012838 303 VGLGLGAIC--L-GL-PWEVTAIALVDTIDGYKQ-----Q--EKNLISEF-KRLFGFLLKKSSLNEVDGE-------IVH 363 (455)
Q Consensus 303 ~Gl~~g~~~--~-g~-~~~vigVe~~g~~~~~~~-----~--~~~l~~~~-~~~ig~~~~~~~~~~~~~~-------~~~ 363 (455)
+|+..-|.. + |. ..++|+|++...+..-+. . ...+..-+ .-++|-+++|..... +.. .+.
T Consensus 269 ag~~yPfi~d~l~g~~~~~fiAvep~a~P~lT~GeY~YD~gDtagltPllKMyTlGhd~vpPpihA-gGLRYHG~aPtls 347 (432)
T COG1350 269 AGLTYPFIGDKLRGKKETRFIAVEPKACPKLTKGEYRYDFGDTAGLTPLLKMYTLGHDYVPPPIHA-GGLRYHGVAPTLS 347 (432)
T ss_pred ccccchhhhhhhcCCceeEEEEeCCccCCccccceeeccCCchhccchhhhhhccCCCccCCCccc-ccccccCcChHHH
Confidence 999988853 2 32 389999999776532110 0 00111111 023454444332210 000 111
Q ss_pred -heeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCC--CCCeEEEEecC-CCcchhhhHH
Q 012838 364 -WVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLK--QDADVVMLHTG-GTLGMFGLAQ 437 (455)
Q Consensus 364 -l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~--~g~~VV~I~TG-G~~~~~~~~~ 437 (455)
+++.-.-.....+.+|+++|...+++.|||..-|- |+.|+.++.+.+.+... +.+.|+|-++| |+.|+.++.+
T Consensus 348 ~L~~~Giv~a~ay~Q~Evfeaa~lFa~~EGiVPAPE-saHAi~~aid~A~~a~~~geekvI~fnlSGHGllDL~~Y~~ 424 (432)
T COG1350 348 LLVKEGIVEARAYDQEEVFEAAVLFARTEGIVPAPE-SAHAIKAAIDEALKAREEGEEKVILFNLSGHGLLDLSAYDK 424 (432)
T ss_pred HHHHcCcccceecChHHHHHHHHHHHHhcCCccCCc-chhhHHHHHHHHHhccccCceeEEEEeccCccccchhhHHH
Confidence 12222223456789999999999999999999997 78999998887665322 23456777899 9999887543
No 84
>PRK09225 threonine synthase; Validated
Probab=99.89 E-value=9.3e-22 Score=206.47 Aligned_cols=276 Identities=15% Similarity=0.115 Sum_probs=177.8
Q ss_pred eEEEEeCCCCCCCcccchhhhHHh---hHHHHHhCCCCEEE--ecCchhHHH--HHHHHhCCeEEEEecCC-Cccccchh
Q 012838 108 CFYVVRDDLLHPLVNGNKARKMDA---LLPLLEDHIVTDLV--TCGGCQSAH--ATAVERGLKSHLLLRGE-QPQILTGY 179 (455)
Q Consensus 108 ~lylKrEdl~~p~~GsnK~Rkl~~---~l~~A~~~G~~~VV--t~G~~~sNh--a~Aa~~Gl~~~iv~~~~-~~~~~~~~ 179 (455)
++|+.--.+ +| |||||||.+.. ++..+++.+...|+ |+|+++++. +++.+.|++|+|++|.. .+.. +
T Consensus 97 ~~~~lELfh-GP-T~sFKD~a~~~l~~~l~~a~~~~~~~Il~ATSGdtG~Aa~aaf~~~~gi~~~V~~P~g~vs~~---q 171 (462)
T PRK09225 97 NLYVLELFH-GP-TLAFKDFALQFLAQLLEYVLKGEKITILGATSGDTGSAAAEAFRGKPNVRVVILYPKGKVSPV---Q 171 (462)
T ss_pred CceeHhhcc-CC-ccchhhhHHHHHHHHHHHHHhCCCcEEEEcCCCcHHHHHHHHHhCcCCCEEEEEEcCCCCCHH---H
Confidence 578755455 58 89999999987 88888773366666 478887555 36669999999999975 4443 4
Q ss_pred hHHHHhC-Cc-E--EEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccCCeE
Q 012838 180 NLISTIY-GK-V--TYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKV 255 (455)
Q Consensus 180 ~~~~~~~-GA-V--~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 255 (455)
..+|..+ |+ | +.|++. |++.....+. +.. + .++... ...
T Consensus 172 ~~Qm~t~~g~nv~vi~V~G~-fDD~q~~vk~----~~~------------d-------------------~~~~~~-~~l 214 (462)
T PRK09225 172 EKQMTTLQGDNIHVVAVEGN-FDDCQALVKA----AFN------------D-------------------EELKEK-LKL 214 (462)
T ss_pred HHHHHhhcCCCeEEEEeCCC-HHHHHHHHHH----Hhh------------c-------------------hhhhhc-Cce
Confidence 4678888 86 6 778774 7765544322 100 0 001111 123
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHHHHcCC--CCCCEEEEeCCCcchHHHHHHHHHhcCCCc-eEEEEeccCChh-h-H
Q 012838 256 LIVNEGAGDAVALLGVFRLLQYLSQDHLLGR--KRAIKFVVDAGTGTTAVGLGLGAICLGLPW-EVTAIALVDTID-G-Y 330 (455)
Q Consensus 256 y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~--~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~-~vigVe~~g~~~-~-~ 330 (455)
+..+ ..||..++|+++.+.|+.+|+ +| ..||.|+||+|+||++.|.+++ +++|..+ |+|+++-...+. . +
T Consensus 215 ~saN--SiN~~Ri~gQ~~yyfea~~ql--~~~~~~p~~~vVPtGnfgni~a~~~A-k~mGlpi~kli~A~n~n~~l~~~~ 289 (462)
T PRK09225 215 SSAN--SINIGRLLAQIVYYFYAYLQL--GIEAGEKVNFSVPSGNFGNILAGYYA-KKMGLPIKRLIVATNENDVLTRFL 289 (462)
T ss_pred EEEe--ccCHHHHHHHHHHHHHHHHHh--ccccCCCCEEEEECCcHHHHHHHHHH-HHcCCCcceEEEEecCChHHHHHH
Confidence 4333 358999999999999999997 33 2599999999999999999999 5588765 899987322221 1 1
Q ss_pred HHhhHh---HHHHHHHHhcccccCCCcCc-----ccc---ccchh---eeeccC---------------cEEEeCCHHHH
Q 012838 331 KQQEKN---LISEFKRLFGFLLKKSSLNE-----VDG---EIVHW---VERCRP---------------RKFGNVFEGEI 381 (455)
Q Consensus 331 ~~~~~~---l~~~~~~~ig~~~~~~~~~~-----~~~---~~~~l---~~~~~~---------------~~~~v~d~ei~ 381 (455)
....-. ....++..+... .|.++.. .+. ....+ ++..++ ..+.|+|+|+.
T Consensus 290 ~~G~y~~~~~~~T~s~amdI~-~psn~eR~l~~~~~~~~~~v~~~m~~l~~~gg~~~~~~~~~~~~~~f~a~~vsD~ei~ 368 (462)
T PRK09225 290 KTGVYDPRPTVATLSPAMDIS-VSSNFERLLFDLLGRDAAAVEELMEDLEEKGEYDLSDEELAALREDFSAGSVSDEETL 368 (462)
T ss_pred HcCCCccCCCCCCcCchhhcC-CCCcHHHHHHHhcCCcHHHHHHHHHHHHHcCCcccCHHHHHHhhhcceEEEECHHHHH
Confidence 111000 000111111000 0111100 000 01011 112222 56789999999
Q ss_pred HHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhH
Q 012838 382 EACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 382 ~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
++++++++++|+++||. ||.+++++.++. .+++++|++.|| |........
T Consensus 369 ~ai~~~~~~~G~~~dPh-tAva~aa~~~~~----~~~~~~V~l~Ta~p~Kf~~~v~ 419 (462)
T PRK09225 369 ATIREVYEEYGYLIDPH-TAVAYKAAREYL----DPGEPGVVLSTAHPAKFPEVVE 419 (462)
T ss_pred HHHHHHHHhCCEEECch-HHHHHHHHHHhh----CCCCCEEEEecCCccCCHHHHH
Confidence 99999999999999996 899999998762 346789999999 777765544
No 85
>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.
Probab=99.88 E-value=2.6e-21 Score=203.17 Aligned_cols=278 Identities=15% Similarity=0.103 Sum_probs=179.9
Q ss_pred ceEEEEeCCCCCCCcccchhhhHHhh---HHHHHhC--CCCEEE--ecCchhHHH--HHHHHhCCeEEEEecCC-Ccccc
Q 012838 107 RCFYVVRDDLLHPLVNGNKARKMDAL---LPLLEDH--IVTDLV--TCGGCQSAH--ATAVERGLKSHLLLRGE-QPQIL 176 (455)
Q Consensus 107 ~~lylKrEdl~~p~~GsnK~Rkl~~~---l~~A~~~--G~~~VV--t~G~~~sNh--a~Aa~~Gl~~~iv~~~~-~~~~~ 176 (455)
.++|++-..++ | |++||||.+..+ +..+.++ +...|+ |+|+++++. +++.+.|++|+|++|.. .++.
T Consensus 95 ~~~~~lELfhG-P-T~sFKD~a~~~l~~l~~~~~~~~~~~~~Il~ATSGdTG~Aa~aaf~~~~gi~v~Vl~P~g~vs~~- 171 (460)
T cd01560 95 DNLYVLELFHG-P-TLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDVVVLYPKGGVSPI- 171 (460)
T ss_pred CCcEEeeeeeC-C-CcchHHhHHHHHHHHHHHHHHhcCCCeEEEEcCCCcHHHHHHHHHhCcCCCEEEEEEcCCCCCHH-
Confidence 35789888884 8 899999998765 6666554 667777 478887663 46779999999999975 4443
Q ss_pred chhhHHHHhCCc----EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhccccccccccccccccC
Q 012838 177 TGYNLISTIYGK----VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCR 252 (455)
Q Consensus 177 ~~~~~~~~~~GA----V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 252 (455)
+..+|..+|+ ++.|++. |++.....+. +.. +. ++.. .
T Consensus 172 --Q~~Qm~t~g~~Nv~vi~V~G~-fDd~q~~vk~----~~~------------d~-------------------~~~~-~ 212 (460)
T cd01560 172 --QELQMTTLPADNVHVVAVEGD-FDDCQSLVKA----LFA------------DE-------------------DFNK-K 212 (460)
T ss_pred --HHHHHHhhCCCceEEEEEcCC-HHHHHHHHHH----Hhc------------Ch-------------------hhHh-c
Confidence 4467888982 6778774 7765544322 100 00 0111 1
Q ss_pred CeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCC---CCCEEEEeCCCcchHHHHHHHHHhcCCCc-eEEEEeccCChh
Q 012838 253 KKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRK---RAIKFVVDAGTGTTAVGLGLGAICLGLPW-EVTAIALVDTID 328 (455)
Q Consensus 253 ~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~---~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~-~vigVe~~g~~~ 328 (455)
...+..+ ..||..++|+++.+.|+.+|+ +|. .||.|+||+|+||++.|.+.+.+ +|.++ ++++++-..+..
T Consensus 213 ~~l~saN--SiN~~Ri~~Q~~yyf~a~~ql--~~~~~~~p~~~vVPtGnfgni~a~~~Ak~-mGlpi~kli~a~n~n~il 287 (460)
T cd01560 213 LKLSSAN--SINWARILAQIVYYFYAYLQL--LKRGEGEKVEFSVPTGNFGNILAGYYAKK-MGLPIKKLIVATNENDVL 287 (460)
T ss_pred ceEEEEe--ccCHHHHHHHHHHHHHHHHHh--ccccCCCCCEEEEECCcHHHHHHHHHHHH-cCCCCccEEEEeCCChHH
Confidence 1233333 358899999999999999997 333 69999999999999999999976 78754 888865444322
Q ss_pred h-H-HHhhHhHHHHHHHHhcccccCCCcCccccccchheeeccC------------------------------cEEEeC
Q 012838 329 G-Y-KQQEKNLISEFKRLFGFLLKKSSLNEVDGEIVHWVERCRP------------------------------RKFGNV 376 (455)
Q Consensus 329 ~-~-~~~~~~l~~~~~~~ig~~~~~~~~~~~~~~~~~l~~~~~~------------------------------~~~~v~ 376 (455)
. + ....-...+....++..+ +.+..+...+..+..+....+ ..+.|+
T Consensus 288 ~~~~~~G~y~~~~~~~~T~spa-mdI~~psn~eR~L~~l~~~~g~~~~~~m~~~~~~g~~~~~~~~l~~~~~~f~a~~vs 366 (460)
T cd01560 288 RRFFKTGRYDRRESLKQTLSPA-MDILKSSNFERLLFLLAGRDRTKVKMLMEEFEATGFLSLPKEELKKLREDFSSGSVS 366 (460)
T ss_pred HHHHHcCCCcCCCCCCCCcCch-hhcCCCCCHHHHHHHHhCCCHHHHHHHHHHHHhcCCEecCHHHHHhhhccceEEEEC
Confidence 1 1 111100000000111100 000000000111111122222 457899
Q ss_pred CHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC-CCcchhhhH
Q 012838 377 FEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG-GTLGMFGLA 436 (455)
Q Consensus 377 d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG-G~~~~~~~~ 436 (455)
|+|+.++++++++++|+++||. ||.+++++.++.++ +++++|++.|| |........
T Consensus 367 D~ei~~~i~~~~~~~G~~vdPh-tAva~aa~~~~~~~---~~~~~V~l~Ta~p~Kf~~~v~ 423 (460)
T cd01560 367 DEETLETIREVYEETGYLIDPH-TAVGVRAAERVRKS---PGTPGVVLSTAHPAKFPEAVK 423 (460)
T ss_pred HHHHHHHHHHHHHhcCEEECch-HHHHHHHHHHHHhc---cCCCEEEEecCCcccCHHHHH
Confidence 9999999999999999999996 89999999887543 35689999999 777655543
No 86
>COG3048 DsdA D-serine dehydratase [Amino acid transport and metabolism]
Probab=99.41 E-value=1e-11 Score=120.99 Aligned_cols=286 Identities=14% Similarity=0.107 Sum_probs=179.0
Q ss_pred ceEEEEeCCCCCCCcccchhhhH-HhhHHH----HHhCCC--------------------CEEE---ecCchhHHHH-HH
Q 012838 107 RCFYVVRDDLLHPLVNGNKARKM-DALLPL----LEDHIV--------------------TDLV---TCGGCQSAHA-TA 157 (455)
Q Consensus 107 ~~lylKrEdl~~p~~GsnK~Rkl-~~~l~~----A~~~G~--------------------~~VV---t~G~~~sNha-~A 157 (455)
.++|+|+|... |..||.|+|+- .-++.+ |.+.|. +.=| ++||-+-+.+ ..
T Consensus 101 G~llLK~DshL-pIsGSIKARGGIYEVL~hAE~LAle~Gll~~~DDYs~L~~~~f~~FFs~ysIaVGSTGNLGlSIGI~s 179 (443)
T COG3048 101 GRLLLKKDSHL-PISGSIKARGGIYEVLKHAEKLALEAGLLTLEDDYSILLSEEFKDFFSRYSIAVGSTGNLGLSIGIMS 179 (443)
T ss_pred cceeeeccCCC-CcccceeccccHHHHHHHHHHHHHhcCcccccchHHHhhcHHHHHHHHhheEeecccCccceehhhhh
Confidence 47999999997 76799999984 444444 344553 1112 4455443333 46
Q ss_pred HHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCCchhhHHHHHHHHhhhhhcCCCCccchhhhhHHHHHhhhhhc
Q 012838 158 VERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSRA 236 (455)
Q Consensus 158 a~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~~~~~~~~~~~~~A~~la~~~g~~~w~~~~~~~~~~~~~~~~ 236 (455)
+.+|.++++.|..+. +.-+..+.|..|- |+....+ |.. +.+. |
T Consensus 180 A~lGF~vtVHMSADA---r~WKKd~LRs~gV~ViEYe~D-Y~~---AVee---------G-------------------- 223 (443)
T COG3048 180 AALGFKVTVHMSADA---RAWKKDKLRSHGVTVVEYEQD-YGV---AVEE---------G-------------------- 223 (443)
T ss_pred hhhcceEEEEecchH---HHHHHHHHHhcCceEEEecch-hhH---HHHH---------h--------------------
Confidence 799999999998764 2223345689995 7765543 542 2211 0
Q ss_pred cccccccccccccccCCeEEEecCCCCc-HHHHHHHHHHHHHHHHHHH-cC----CCCCCEEEEeCCCcchHHHHHHHHH
Q 012838 237 SCLGQMDAHKGIDNCRKKVLIVNEGAGD-AVALLGVFRLLQYLSQDHL-LG----RKRAIKFVVDAGTGTTAVGLGLGAI 310 (455)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~y~ip~g~~n-p~~~~G~~t~~~Ei~eq~~-~g----~~~pD~vvvpvGtGgt~~Gl~~g~~ 310 (455)
++-++..|..|+|- ..| -....||.-.+.-|..|+. .| ...|-.|.+|+|-||.--|++-|+|
T Consensus 224 ---------Rk~a~~DP~c~FiD--DE~S~~LFLGYaVAa~Rlk~Q~d~~gi~vd~ehPLfVylPCGVGGgPGGVafGLK 292 (443)
T COG3048 224 ---------RKEAESDPNCFFID--DENSRTLFLGYAVAAQRLKKQFDEQGIVVDAEHPLFVYLPCGVGGGPGGVAFGLK 292 (443)
T ss_pred ---------hhhhccCCceEEec--ccchhhhhhhHHHHHHHHHHHHHhcCceecCCCceEEEeecCCCCCcchhhhhhH
Confidence 01134467778774 333 3456899888899998884 23 1246689999999999999999998
Q ss_pred h-cCCCceEEEEeccCChhhHHHhhHhHHHHHH-HHhcccc----cCCCcCccccccchheeeccCcEEEeCCHHHHHHH
Q 012838 311 C-LGLPWEVTAIALVDTIDGYKQQEKNLISEFK-RLFGFLL----KKSSLNEVDGEIVHWVERCRPRKFGNVFEGEIEAC 384 (455)
Q Consensus 311 ~-~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~-~~ig~~~----~~~~~~~~~~~~~~l~~~~~~~~~~v~d~ei~~a~ 384 (455)
. .|..+.++-+||.-++.++..-...+-+.+. .-+|.+. .++.+..+..-.=.+.++..++.|+|+|+..++..
T Consensus 293 l~fgd~VhcfFaEPthsPcMlLGv~tGlHe~ISVqdiGidn~TaADGLAVgRpSgfVgr~me~lL~G~~TvdD~~ly~lL 372 (443)
T COG3048 293 LAFGDHVHCFFAEPTHSPCMLLGVYTGLHEQISVQDIGIDNLTAADGLAVGRPSGFVGRAMERLLDGYYTVDDQTLYDLL 372 (443)
T ss_pred hhhcCceEEEEecCCCChHHHHhhhhccccceeeEeecccccccccceeecCccchHHHHHHHHhCCcEEechHHHHHHH
Confidence 5 4778999999998877654221111111110 0011110 12222222211123455667789999999999999
Q ss_pred HHHHHHhCCcccccchHHHHHHHHHHhhh--------c----CCCCCeEEEEecCCCcchhhhHHHHHH
Q 012838 385 HRIAQLTGILVDPVYTLAAWEMATLLSDE--------K----LKQDADVVMLHTGGTLGMFGLAQRYKS 441 (455)
Q Consensus 385 r~La~~eGI~veP~ysgaalAgl~~l~~~--------~----~~~g~~VV~I~TGG~~~~~~~~~ry~~ 441 (455)
++|++.|||.+||+ +-++++|..++.+. . .-.+..-|+|-|||-.-...--+.|..
T Consensus 373 ~~L~~~e~~rlEPS-alAgm~Gp~~~~~~~~g~~~~~~~~~~~~~natHlvWaTGG~MVPeeeM~~yl~ 440 (443)
T COG3048 373 GWLAQEEGIRLEPS-ALAGMAGPQRVCASVEGYRYRHGFSAEQLNNATHLVWATGGGMVPEEEMEAYLA 440 (443)
T ss_pred HHHHHhcCcccCch-hhhcccCcceeeechhHHHHHhhchhhhhcCeeEEEEecCCCcCCHHHHHHHHh
Confidence 99999999999994 44666665554321 1 113556699999988766655555543
No 87
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=52.29 E-value=1.5e+02 Score=27.82 Aligned_cols=114 Identities=18% Similarity=0.042 Sum_probs=62.8
Q ss_pred CCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhhHHHhhHhHHHHHHHHhcccccCCC---cC-ccccccc
Q 012838 287 KRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDGYKQQEKNLISEFKRLFGFLLKKSS---LN-EVDGEIV 362 (455)
Q Consensus 287 ~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~~~~~~~~l~~~~~~~ig~~~~~~~---~~-~~~~~~~ 362 (455)
..|+.++..+|.|+-..++-.+ ..+|.-++|++|........ ...=++.+|.+.+-+. .+ ...+..
T Consensus 32 ~~~g~~l~DIGaGtGsi~iE~a--~~~p~~~v~AIe~~~~a~~~-------~~~N~~~fg~~n~~vv~g~Ap~~L~~~~- 101 (187)
T COG2242 32 PRPGDRLWDIGAGTGSITIEWA--LAGPSGRVIAIERDEEALEL-------IERNAARFGVDNLEVVEGDAPEALPDLP- 101 (187)
T ss_pred CCCCCEEEEeCCCccHHHHHHH--HhCCCceEEEEecCHHHHHH-------HHHHHHHhCCCcEEEEeccchHhhcCCC-
Confidence 5788999999999999988877 36899999999975432111 1111122232211000 00 000000
Q ss_pred hheeeccCcEEEeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhh
Q 012838 363 HWVERCRPRKFGNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSD 412 (455)
Q Consensus 363 ~l~~~~~~~~~~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~ 412 (455)
..+.-+.+++ ...+++++++-+..+.-|-+|=-+.+--.++.+++..+
T Consensus 102 ~~daiFIGGg--~~i~~ile~~~~~l~~ggrlV~naitlE~~~~a~~~~~ 149 (187)
T COG2242 102 SPDAIFIGGG--GNIEEILEAAWERLKPGGRLVANAITLETLAKALEALE 149 (187)
T ss_pred CCCEEEECCC--CCHHHHHHHHHHHcCcCCeEEEEeecHHHHHHHHHHHH
Confidence 1233344544 67889999888877776655543333334444444333
No 88
>KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription]
Probab=39.25 E-value=1e+02 Score=31.82 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=37.3
Q ss_pred HHHHHHHHH---HHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 267 ALLGVFRLL---QYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 267 ~~~G~~t~~---~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
+.+.|.+++ .-|.+... +--|.||+.||.|+.+..++.+.. -.-+|++||+..-.
T Consensus 155 MmQDYVRTgTY~~Ail~N~s---DF~~kiVlDVGaGSGILS~FAaqA---GA~~vYAvEAS~MA 212 (517)
T KOG1500|consen 155 MMQDYVRTGTYQRAILENHS---DFQDKIVLDVGAGSGILSFFAAQA---GAKKVYAVEASEMA 212 (517)
T ss_pred HHHHHHhhhHHHHHHHhccc---ccCCcEEEEecCCccHHHHHHHHh---CcceEEEEehhHHH
Confidence 455666554 34445431 345899999999998877776544 35789999986643
No 89
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=31.64 E-value=2.8e+02 Score=27.04 Aligned_cols=90 Identities=17% Similarity=0.127 Sum_probs=51.6
Q ss_pred CeEEEecCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCChhh-HH
Q 012838 253 KKVLIVNEGAGDAVALLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTIDG-YK 331 (455)
Q Consensus 253 ~~~y~ip~g~~np~~~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~~~-~~ 331 (455)
.+.+++|....+..........+.+..++.. .++. ++.+|.|.|+.-+...+.. .....+.-|+..|.... ..
T Consensus 20 k~~~Vv~~~~~~~~~~~~l~~~aA~~L~~~l----~~~~-~iGv~wG~Tl~~~~~~l~~-~~~~~~~vV~l~Gg~~~~~~ 93 (255)
T PF04198_consen 20 KEVIVVPSPSDDEDILESLGEAAAEYLSELL----KDGD-VIGVGWGRTLYAVANHLPP-KSLPNVTVVPLIGGVGNSNS 93 (255)
T ss_dssp SEEEEESSSTTTHHHHHHHHHHHHHHHHHH------TTE-EEEE-TSHHHHHHHHTS---SSSSCEEEEESBSBTTTSSG
T ss_pred CEEEEecCCCChHHHHHHHHHHHHHHHHHhC----CCCC-EEEEcchHHHHHHHHhcCc-cCCCCcEEEECCCCCCCCCC
Confidence 4678888776543333333333333333321 2233 8899999999999887765 45667788888886532 11
Q ss_pred HhhHhHHHHHHHHhccc
Q 012838 332 QQEKNLISEFKRLFGFL 348 (455)
Q Consensus 332 ~~~~~l~~~~~~~ig~~ 348 (455)
.....++..+++.++..
T Consensus 94 ~~~~~i~~~lA~~~g~~ 110 (255)
T PF04198_consen 94 YQANEIARRLAEKLGGK 110 (255)
T ss_dssp GSHHHHHHHHHHHHTSE
T ss_pred cCHHHHHHHHHHHhCCc
Confidence 22345667777776653
No 90
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it []. It is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2X0S_A 2OLS_A 2HRO_A 2E28_A 2WQD_A 3T05_D 3T0T_D 3T07_B 2DIK_A 2FM4_A ....
Probab=30.09 E-value=74 Score=25.15 Aligned_cols=33 Identities=30% Similarity=0.246 Sum_probs=22.5
Q ss_pred hCCCCEEEe-cCchhHHHH-HHHHhCCeEEEEecC
Q 012838 138 DHIVTDLVT-CGGCQSAHA-TAVERGLKSHLLLRG 170 (455)
Q Consensus 138 ~~G~~~VVt-~G~~~sNha-~Aa~~Gl~~~iv~~~ 170 (455)
..+...||+ .|+..|..+ .|..+|+++++-++.
T Consensus 28 ~~~~~Giv~~~Gg~~SH~aIlAr~~giP~ivg~~~ 62 (80)
T PF00391_consen 28 LQRVAGIVTEEGGPTSHAAILARELGIPAIVGVGD 62 (80)
T ss_dssp HTTSSEEEESSSSTTSHHHHHHHHTT-EEEESTTT
T ss_pred hhheEEEEEEcCCccchHHHHHHHcCCCEEEeecc
Confidence 456788998 465544333 688999999987753
No 91
>KOG2616 consensus Pyridoxalphosphate-dependent enzyme/predicted threonine synthase [Amino acid transport and metabolism]
Probab=29.34 E-value=97 Score=29.99 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=31.2
Q ss_pred EeCCHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHhhh
Q 012838 374 GNVFEGEIEACHRIAQLTGILVDPVYTLAAWEMATLLSDE 413 (455)
Q Consensus 374 ~v~d~ei~~a~r~La~~eGI~veP~ysgaalAgl~~l~~~ 413 (455)
.|+++|+.++|..++...+-.+||- ||.++....+...+
T Consensus 150 ~vS~ee~~~ti~k~yes~~YiLdPH-TAVav~~~~r~idk 188 (266)
T KOG2616|consen 150 RVSNEETTQTIKKIYESNHYILDPH-TAVAVNYHYRQIDK 188 (266)
T ss_pred hcCcHHHHHHHHHHhccCCeeecCc-hHHHHHHHHHHHhc
Confidence 3789999999999999999999996 77666655554443
No 92
>PRK12483 threonine dehydratase; Reviewed
Probab=25.86 E-value=7.4e+02 Score=27.05 Aligned_cols=33 Identities=30% Similarity=0.374 Sum_probs=24.0
Q ss_pred EEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 293 VVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 293 vvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
|+++++|-+..|++.+.+.+| ++.+-|.|...+
T Consensus 88 VV~aSaGNha~gvA~aA~~lG--i~~~IvmP~~tp 120 (521)
T PRK12483 88 VITASAGNHAQGVALAAARLG--VKAVIVMPRTTP 120 (521)
T ss_pred EEEECCCHHHHHHHHHHHHhC--CCEEEEECCCCC
Confidence 556677899999998888776 455666666643
No 93
>PRK08813 threonine dehydratase; Provisional
Probab=25.44 E-value=7.6e+02 Score=25.43 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=23.6
Q ss_pred EEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 293 VVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 293 vvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
|+++.+|.+..+++.+-+.+|. +.+-|.+....
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi--~~~IvvP~~~~ 116 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGV--QAITVMPHGAP 116 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCC--CEEEEEcCCCC
Confidence 6777889999999888887775 44445565543
No 94
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=25.21 E-value=1.3e+02 Score=29.55 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=23.4
Q ss_pred HHhCCCCEEEe--cCchhHH---HHHHHHhCCeEEEEecCC
Q 012838 136 LEDHIVTDLVT--CGGCQSA---HATAVERGLKSHLLLRGE 171 (455)
Q Consensus 136 A~~~G~~~VVt--~G~~~sN---ha~Aa~~Gl~~~iv~~~~ 171 (455)
-++.+++.||| +|++++- ..+|..+|++++++-++.
T Consensus 193 ~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 193 LREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred HHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 46678888887 5554222 125668888888887653
No 95
>PRK05988 formate dehydrogenase subunit gamma; Validated
Probab=24.93 E-value=1.5e+02 Score=26.94 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=42.0
Q ss_pred HHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC---CCcchhhhHHHHHHHhc
Q 012838 382 EACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG---GTLGMFGLAQRYKSSFH 444 (455)
Q Consensus 382 ~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG---G~~~~~~~~~ry~~~~~ 444 (455)
++++.+|+..|+..-=+|+-++|...... .+.|+.++-|.+| ...|.....++.+++|+
T Consensus 42 e~~~~iA~~l~v~~~~V~~vatFY~~f~~----~p~Gk~~I~VC~~~~C~~~G~~~ll~~l~~~Lg 103 (156)
T PRK05988 42 DAVPVIAEALNLSRAEVHGVITFYHDFRT----HPPGRHVLKLCRAEACQAMGGDALAAHAKARLG 103 (156)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhccCC----CCCCCEEEEEeCCchhhcCCHHHHHHHHHHHhC
Confidence 46777888888876555544555554422 2568888888888 66788888888888885
No 96
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=24.85 E-value=2.2e+02 Score=28.61 Aligned_cols=48 Identities=27% Similarity=0.293 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccC
Q 012838 271 VFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVD 325 (455)
Q Consensus 271 ~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g 325 (455)
..++..|..++. ..+..-|+.+|+|+-+.+|+... +|. -+|+||+...
T Consensus 147 TT~lcl~~l~~~----~~~g~~vLDvG~GSGILaiaA~k--lGA-~~v~a~DiDp 194 (295)
T PF06325_consen 147 TTRLCLELLEKY----VKPGKRVLDVGCGSGILAIAAAK--LGA-KKVVAIDIDP 194 (295)
T ss_dssp HHHHHHHHHHHH----SSTTSEEEEES-TTSHHHHHHHH--TTB-SEEEEEESSC
T ss_pred HHHHHHHHHHHh----ccCCCEEEEeCCcHHHHHHHHHH--cCC-CeEEEecCCH
Confidence 334568888776 24456889999999999998654 454 4799999754
No 97
>PRK06202 hypothetical protein; Provisional
Probab=24.37 E-value=85 Score=29.77 Aligned_cols=37 Identities=32% Similarity=0.246 Sum_probs=25.0
Q ss_pred CEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCC
Q 012838 290 IKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDT 326 (455)
Q Consensus 290 D~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~ 326 (455)
..+=+++|+|....-+...++..|+..+|+||+....
T Consensus 63 ~iLDlGcG~G~~~~~L~~~~~~~g~~~~v~gvD~s~~ 99 (232)
T PRK06202 63 TLLDIGCGGGDLAIDLARWARRDGLRLEVTAIDPDPR 99 (232)
T ss_pred EEEEeccCCCHHHHHHHHHHHhCCCCcEEEEEcCCHH
Confidence 3455666666655555555555677889999998653
No 98
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=24.32 E-value=1e+02 Score=30.35 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=24.7
Q ss_pred HHhCCCCEEEe--cCchhHHHH---HHHHhCCeEEEEecC
Q 012838 136 LEDHIVTDLVT--CGGCQSAHA---TAVERGLKSHLLLRG 170 (455)
Q Consensus 136 A~~~G~~~VVt--~G~~~sNha---~Aa~~Gl~~~iv~~~ 170 (455)
.++.+++.||| +|+.++-.. +|..+|++++++=++
T Consensus 192 l~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 192 LEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 46778888887 565544444 577889998888765
No 99
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=23.70 E-value=1.3e+02 Score=32.78 Aligned_cols=91 Identities=24% Similarity=0.322 Sum_probs=55.8
Q ss_pred CCCCCcccccCCCCCCcCCCcccccCCCceEEEEeCCCCCCCcccchhhhHHhhHHHHHhCCCCEEEecCchhH-HHHHH
Q 012838 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQS-AHATA 157 (455)
Q Consensus 79 g~TPL~~~~~~~l~~~~~g~~~~~~~~g~~lylKrEdl~~p~~GsnK~Rkl~~~l~~A~~~G~~~VVt~G~~~s-Nha~A 157 (455)
|.|||.-+ .+- +.+ | -||+| |.-.| |.|-|- .+.+++|.++|.++|-+.- +.+.|
T Consensus 426 GGTPL~V~--~~~--~~~---------G-VI~Lk--DivK~---Gi~ERf-----~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 426 GGTPLVVV--ENG--RIL---------G-VIYLK--DIVKP---GIKERF-----AELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred CCCceEEE--ECC--EEE---------E-EEEeh--hhcch---hHHHHH-----HHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 88999877 331 222 2 38888 44434 477775 5679999999998886542 23357
Q ss_pred HHhCCeEEEEecCCCccccchhhHHHHhCCc-EEEeCCC
Q 012838 158 VERGLKSHLLLRGEQPQILTGYNLISTIYGK-VTYVPRT 195 (455)
Q Consensus 158 a~~Gl~~~iv~~~~~~~~~~~~~~~~~~~GA-V~~v~~~ 195 (455)
+..|++-.+ -+.+|+.+..-...-+.-|. |-.+..+
T Consensus 482 ~EAGVDdfi--AeatPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 482 AEAGVDDFI--AEATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred HHhCchhhh--hcCChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 788887543 34555544322233455677 5566554
No 100
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional
Probab=23.26 E-value=1.7e+02 Score=27.20 Aligned_cols=71 Identities=25% Similarity=0.288 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHhCCccc-ccchH---HHHHHHHHHhhhcCCCCCeEEEEecCCCcchhhhH-HHHHHHhcccc
Q 012838 377 FEGEIEACHRIAQLTGILVD-PVYTL---AAWEMATLLSDEKLKQDADVVMLHTGGTLGMFGLA-QRYKSSFHSLK 447 (455)
Q Consensus 377 d~ei~~a~r~La~~eGI~ve-P~ysg---aalAgl~~l~~~~~~~g~~VV~I~TGG~~~~~~~~-~ry~~~~~~~~ 447 (455)
++++.+..+++.+..+|++- |.|-+ ..+-.+++++......++.++++.|||..+-.-.. ...+.-|..++
T Consensus 54 ~~~~~~~~~~i~~AD~iIi~tP~Y~~s~pg~LKn~iD~l~~~~l~~K~v~iiat~G~~~~~~~~~~~lr~~l~~l~ 129 (191)
T PRK10569 54 SPALKTFTEQLAQADGLIVATPVYKASFSGALKTLLDLLPERALEHKVVLPLATGGSVAHMLAVDYALKPVLSALK 129 (191)
T ss_pred CHHHHHHHHHHHHCCEEEEECCccCCCCCHHHHHHHHhCChhhhCCCEEEEEEecCCchhHHHHHHHHHHHHHHcC
Confidence 45778888888888887765 76653 33444444443333457888999999888755444 33344444443
No 101
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=22.36 E-value=8.3e+02 Score=26.46 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=24.2
Q ss_pred CEEEEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 290 IKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 290 D~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
..|| ++++|-+..|++.+.+.+|. +.+.|.|...+
T Consensus 66 ~gVV-~aSaGNha~~vA~aa~~~Gi--~~~IvmP~~tp 100 (499)
T TIGR01124 66 RGVI-AASAGNHAQGVAFSAARLGL--KALIVMPETTP 100 (499)
T ss_pred CEEE-EECCCHHHHHHHHHHHHcCC--CEEEEECCCCC
Confidence 3444 45788899999988887764 55666676644
No 102
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=22.18 E-value=2e+02 Score=27.47 Aligned_cols=45 Identities=16% Similarity=0.026 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCCCCCEEE-EeCCCcchHHHHHHHHHhcCCCceEEEEecc
Q 012838 275 LQYLSQDHLLGRKRAIKFV-VDAGTGTTAVGLGLGAICLGLPWEVTAIALV 324 (455)
Q Consensus 275 ~~Ei~eq~~~g~~~pD~vv-vpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~ 324 (455)
-+||.-++ +||.|+ +.+=.||.+.=.+.-+..++...+|+||+..
T Consensus 24 ~qeli~~~-----kPd~IIE~Gi~~GGSli~~A~ml~~~~~~~~VigiDId 69 (206)
T PF04989_consen 24 YQELIWEL-----KPDLIIETGIAHGGSLIFWASMLELLGGKGKVIGIDID 69 (206)
T ss_dssp HHHHHHHH-------SEEEEE--TTSHHHHHHHHHHHHTT---EEEEEES-
T ss_pred HHHHHHHh-----CCCeEEEEecCCCchHHHHHHHHHHhCCCceEEEEeCC
Confidence 36666664 588766 5555788887777767778889999999984
No 103
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=21.43 E-value=2.2e+02 Score=26.35 Aligned_cols=46 Identities=15% Similarity=-0.065 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEEEe
Q 012838 268 LLGVFRLLQYLSQDHLLGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTAIA 322 (455)
Q Consensus 268 ~~G~~t~~~Ei~eq~~~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vigVe 322 (455)
.++..+++.+|.++ | -.||.|+.=.|=|-++ .+++.-|++++++-.
T Consensus 50 g~av~~a~~~L~~~---G-f~PDvI~~H~GWGe~L-----flkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 50 GQAVARAARQLRAQ---G-FVPDVIIAHPGWGETL-----FLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHHHHc---C-CCCCEEEEcCCcchhh-----hHHHhCCCCcEEEEE
Confidence 34444556666665 5 4899999988877764 678888899998864
No 104
>PRK07571 bidirectional hydrogenase complex protein HoxE; Reviewed
Probab=21.12 E-value=1.4e+02 Score=27.60 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCcccccchHHHHHHHHHHhhhcCCCCCeEEEEecC---CCcchhhhHHHHHHHhc
Q 012838 382 EACHRIAQLTGILVDPVYTLAAWEMATLLSDEKLKQDADVVMLHTG---GTLGMFGLAQRYKSSFH 444 (455)
Q Consensus 382 ~a~r~La~~eGI~veP~ysgaalAgl~~l~~~~~~~g~~VV~I~TG---G~~~~~~~~~ry~~~~~ 444 (455)
++++.+|+..|+..--+|+-++|...... .+.|+.++-|.+| ...|.....+..+++|+
T Consensus 55 e~~~~iA~~l~v~~a~V~gVatFY~~f~~----~P~Gk~~I~VC~g~aC~~~G~~~ll~~l~~~Lg 116 (169)
T PRK07571 55 DLLLYVARQLKLPLSRVYGVATFYHLFSL----KPSGEHTCVVCTGTACYVKGSAAILEDLENELG 116 (169)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHccccCc----CCCCCEEEEEcCChHHHHCCcHHHHHHHHHHhC
Confidence 46677777788765434444444444321 2568888888888 56777888888888886
No 105
>PRK09224 threonine dehydratase; Reviewed
Probab=20.93 E-value=9.4e+02 Score=26.02 Aligned_cols=33 Identities=33% Similarity=0.435 Sum_probs=23.3
Q ss_pred EEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 293 VVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 293 vvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
|+++++|-+..|++.+.+.+| ++.+.|.+...+
T Consensus 71 vV~aSaGNha~avA~aa~~lG--i~~~IvmP~~tp 103 (504)
T PRK09224 71 VITASAGNHAQGVALSAARLG--IKAVIVMPVTTP 103 (504)
T ss_pred EEEECcCHHHHHHHHHHHHcC--CCEEEEECCCCC
Confidence 445568888889988888776 456667776543
No 106
>PLN02550 threonine dehydratase
Probab=20.57 E-value=1.1e+03 Score=26.35 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=23.0
Q ss_pred EEeCCCcchHHHHHHHHHhcCCCceEEEEeccCCh
Q 012838 293 VVDAGTGTTAVGLGLGAICLGLPWEVTAIALVDTI 327 (455)
Q Consensus 293 vvpvGtGgt~~Gl~~g~~~~g~~~~vigVe~~g~~ 327 (455)
|+++.+|-.+.|++.+.+.+|. +.+-|.+...+
T Consensus 160 VV~aSaGNhAqgvA~aA~~lGi--ka~IvmP~~tp 192 (591)
T PLN02550 160 VICSSAGNHAQGVALSAQRLGC--DAVIAMPVTTP 192 (591)
T ss_pred EEEECCCHHHHHHHHHHHHcCC--CEEEEECCCCC
Confidence 4556788888899988887774 45555666543
No 107
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]
Probab=20.27 E-value=1.9e+02 Score=29.04 Aligned_cols=52 Identities=21% Similarity=0.162 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCEEEEeCCCcchHHHHHHHHHhcCCCceEEE
Q 012838 269 LGVFRLLQYLSQDHL-LGRKRAIKFVVDAGTGTTAVGLGLGAICLGLPWEVTA 320 (455)
Q Consensus 269 ~G~~t~~~Ei~eq~~-~g~~~pD~vvvpvGtGgt~~Gl~~g~~~~g~~~~vig 320 (455)
.|+..=..||..++. .+-..=+-+++.||+|-+++=++.++...|++++|+-
T Consensus 215 ~g~~k~~edl~~~f~~~~l~~~~p~~~sC~~Gisa~~i~~al~r~g~~~~lYd 267 (286)
T KOG1529|consen 215 DGFIKPAEDLKHLFAQKGLKLSKPVIVSCGTGISASIIALALERSGPDAKLYD 267 (286)
T ss_pred ccccCCHHHHHHHHHhcCcccCCCEEEeeccchhHHHHHHHHHhcCCCcceec
Confidence 344322688888774 2322224599999999999999999998888888874
Done!