Query 012839
Match_columns 455
No_of_seqs 180 out of 417
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 17:13:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap5_A GDP-fucose protein O-fu 98.7 6.5E-07 2.2E-11 90.3 19.1 254 156-436 20-341 (408)
2 3zy2_A Putative GDP-fucose pro 96.8 0.0047 1.6E-07 63.0 10.3 230 156-420 6-302 (362)
3 2hhc_A NODZ, nodulation fucosy 92.7 0.52 1.8E-05 45.6 9.8 40 157-196 3-42 (330)
4 2de0_X Alpha-(1,6)-fucosyltran 62.1 1E+02 0.0035 32.5 13.6 139 158-328 145-305 (526)
5 3l32_A Phosphoprotein; antipar 34.4 16 0.00054 27.1 1.5 26 296-321 2-27 (45)
6 3d9w_A Putative acetyltransfer 19.9 53 0.0018 31.9 2.7 32 369-408 76-111 (293)
7 1e2t_A NAT, N-hydroxyarylamine 19.9 50 0.0017 31.8 2.5 31 369-407 66-100 (284)
8 2x4k_A 4-oxalocrotonate tautom 19.6 1.4E+02 0.0048 20.8 4.3 29 160-188 5-36 (63)
9 1p3q_Q VPS9P, vacuolar protein 19.2 23 0.00079 27.1 -0.1 14 409-422 14-27 (54)
10 1w4t_A Arylamine N-acetyltrans 18.4 58 0.002 31.8 2.6 30 369-406 87-120 (299)
No 1
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*
Probab=98.71 E-value=6.5e-07 Score=90.28 Aligned_cols=254 Identities=14% Similarity=0.153 Sum_probs=132.8
Q ss_pred CCcceEEEEEc-C-CchhhHHHHHHHHHHHHHhCCe----EeecccccccccCCC------CCCCCCCChHHHHHhccCC
Q 012839 156 DRRKYLLVVVS-G-GMNQQRNQIVDAVVIARILGAA----LVVPILQVNVIWGDE------SEFSDIFDLEHFKSVLAND 223 (455)
Q Consensus 156 ~snGYL~V~~n-G-GLNQqR~~IcDAVaVARiLNAT----LViP~Ld~~s~W~D~------S~F~DIFDvdhFI~sL~~D 223 (455)
..++||+-..| | |.|.||...-.|.++|+.||.| ||||-...-.-|.-. -.|++.||++++ +..
T Consensus 20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~ 95 (408)
T 4ap5_A 20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN 95 (408)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence 46899999875 4 8999999999999999999999 999976533334332 259999999864 334
Q ss_pred eEEe------ccC-----c---------ccccc---cCCccc-----------ccCCCCCChhhHHh-------------
Q 012839 224 VRIV------SSL-----P---------STHIM---TRPVEE-----------KRTPLHVSPQWIRA------------- 256 (455)
Q Consensus 224 VrIV------k~L-----P---------~~~~~---~~~~~~-----------~~vp~~~spswy~~------------- 256 (455)
|+|| ++. | ..... ...... ...-....|.|-..
T Consensus 96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~~~ 175 (408)
T 4ap5_A 96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQ 175 (408)
T ss_dssp SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEEEC
T ss_pred CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEEEe
Confidence 4444 111 1 00000 000000 00000011223111
Q ss_pred ----HhhHhhhcc---ceEEEeccccccCCC-CchhhhhhhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeecccc
Q 012839 257 ----RYLRRLNRE---GVLLLRGLDSRLSKD-LPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRME 328 (455)
Q Consensus 257 ----~vlP~L~k~---~VI~l~~~d~RLa~~-lP~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfE 328 (455)
.+.|.+.+. .-+-+..+...|++. -..+...+| ..|+|++.|.+.|++.++..- .++|+++|+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r~~ 249 (408)
T 4ap5_A 176 GSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHL-NSTDDADRIPFQ 249 (408)
T ss_dssp SBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCCCC
T ss_pred ecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHh-Ccccceeecccc
Confidence 112333222 222333444444422 223333333 379999999999999988766 468999999999
Q ss_pred chhhhhcccCCCchhhHHHHHHHhhhhhhhhcccCCChHhhhcCCCCCCCHHHHH-HHHHHhCCCCCceEEEeeCCCCCC
Q 012839 329 KDVWVRTGCLPGPEYDEMISNERKQRPELLTARSNMTYHERKLAGLCPLNAVEVT-RLLKALGAPKIARIYWAGGEPLGG 407 (455)
Q Consensus 329 kDMlAfSgC~~g~e~~El~~~~R~~~~~~~~~~~~i~~~~~R~~G~CPLTPeEVg-l~LrALGf~~~T~IYlAsGeiYGg 407 (455)
.|+... |.......- ..+-.+ +.+. -+. ......|=.+-++++ -+.+.|.=-+-+.||||+-+ .
T Consensus 250 ~dw~~~--~~~~~~~~~------~~y~~~-H~Rr-~d~--~~~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~---~ 314 (408)
T 4ap5_A 250 EDWMKM--KVKLGSALG------GPYLGV-HLRR-KDF--IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDA---V 314 (408)
T ss_dssp SSGGGC--CCCTTCBCC------EEEEEE-EECC-TTT--TTTTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECC---C
T ss_pred hhHhhh--hcccccccC------CCcccc-cccc-ccc--hhhhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCC---c
Confidence 887653 433210000 000000 0000 000 000112312223332 22222222244679999985 4
Q ss_pred ccccccHHhhCCCCcccccCCChhhhhhh
Q 012839 408 KEALLPLITEFPHLYNKEDLALPVTFSCL 436 (455)
Q Consensus 408 ~~~L~pL~~~FPnl~tKetLat~eEL~p~ 436 (455)
+..+.-|++.+|.++.-.. ..+++..+
T Consensus 315 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~ 341 (408)
T 4ap5_A 315 RKEYEELKKLLPEMVRFEP--TWEELELY 341 (408)
T ss_dssp HHHHHHHHHHCTTEECCCC--CHHHHHHH
T ss_pred hhHHHHHHHhCCCcEEecC--cchhhhcc
Confidence 4457889999998765433 34455444
No 2
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=96.84 E-value=0.0047 Score=62.95 Aligned_cols=230 Identities=17% Similarity=0.296 Sum_probs=125.0
Q ss_pred CCcceEEEE-EcCCchhhHHHHHHHHHHHHHhCCeEeecccccccccCCCC---CCCCCCChHHHHHhccCCeEEec--c
Q 012839 156 DRRKYLLVV-VSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDES---EFSDIFDLEHFKSVLANDVRIVS--S 229 (455)
Q Consensus 156 ~snGYL~V~-~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld~~s~W~D~S---~F~DIFDvdhFI~sL~~DVrIVk--~ 229 (455)
.+||||+-= |-|-.-+|-...--+.+.|+.||.|||||-+-.-.. +. + .|++-|+++. |+..-|||. +
T Consensus 6 d~~Gyi~yCPCMGRFGNQadhfLG~LafAk~lnRTLvlPpwi~y~~-~~-~~~vpf~~yF~v~~----l~~yhrvi~me~ 79 (362)
T 3zy2_A 6 DPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH-PE-TKMIPFEFLFQVGT----VAKYTRVVTMQE 79 (362)
T ss_dssp CTTCEEEECCCSSSHHHHHHHHHHHHHHHHHHTCEEECCCEEECSS-SS-CEEECHHHHBCHHH----HTTTSCEECHHH
T ss_pred CCCccEEeCCCcCccccHHHHHHHHHHHHHhhCceEecCccccccC-Cc-ccccchhheeecch----hhhhceeeeHHH
Confidence 469999875 889999999999999999999999999997642211 11 3 3777777765 333334432 1
Q ss_pred ----C-----ccccc-----c-c--------CCccccc--CC-----------CCCC----h-----hh----HHhHhhH
Q 012839 230 ----L-----PSTHI-----M-T--------RPVEEKR--TP-----------LHVS----P-----QW----IRARYLR 260 (455)
Q Consensus 230 ----L-----P~~~~-----~-~--------~~~~~~~--vp-----------~~~s----p-----sw----y~~~vlP 260 (455)
| |.+-. . + .+.+..+ .| +..+ + +| +.++...
T Consensus 80 Fm~~lap~~WP~~~R~~~C~~~~~~~~~~~~~~~C~~K~GNPFgpfWd~f~v~F~~se~~~~~~~~l~~~~~~~~~~W~~ 159 (362)
T 3zy2_A 80 FTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKEGNPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLE 159 (362)
T ss_dssp HHHHTHHHHSCGGGCEEEESSCBC-------CCBCCTTSSTTHHHHHHHTTCCCCEEEECTTSTTTTCC-------CHHH
T ss_pred HHHHhccccCCcccceEeeccccccccCCCCCCCCCCCCCCCCCcchhccccccccceeccCccccccccchhHHHHHHH
Confidence 1 11100 0 0 0001100 11 1000 0 11 1111111
Q ss_pred h--hhccceEEEeccccccC-CCCchhhhhhhhhhcccceeechhHHHHHHHHHHHHHcCCCeeeeeccccchhhhhccc
Q 012839 261 R--LNREGVLLLRGLDSRLS-KDLPSDLQKLRCKVAFHALRFAPPILQLGNKLAERMRSKGPYLSLHLRMEKDVWVRTGC 337 (455)
Q Consensus 261 ~--L~k~~VI~l~~~d~RLa-~~lP~eiQrLRCrvnf~ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfEkDMlAfSgC 337 (455)
. -.+|=|+.|++.-.--. ..---.||| -|++++.|.+.|++.++.--.+ ||||+|||-=.|+.-. |
T Consensus 160 ~~p~~~~pVlAf~gaPa~FPv~~e~r~Lqk--------Ym~WS~~i~~~a~~fI~~~L~r-pyVgIHLR~G~DW~~a--C 228 (362)
T 3zy2_A 160 KFPSEEYPVLAFSSAPAPFPSKGKVWSIQK--------YLRWSSRITEQAKKFISANLAK-PFVAVHLRNDADWVRV--C 228 (362)
T ss_dssp HSCTTTCSEEEESSCSSCSSCCGGGGGGGG--------GCCBCHHHHHHHHHHHHHHCCS-SEEEEEECCCHHHHHH--H
T ss_pred hCCcccCceEeecCCCCCCCcChhhHhHHH--------hccccHHHHHHHHHHHHHhcCC-CeEEEEEecCCcHHHH--H
Confidence 1 23678888874322111 000013443 6899999999999999885544 9999999998888754 7
Q ss_pred CCCchh--hHHHHHHHhhhhhhh---hcccCCChHhhhcCCCCCCCHHH----HHHHHHHhCCCCCceEEEeeCCCCCCc
Q 012839 338 LPGPEY--DEMISNERKQRPELL---TARSNMTYHERKLAGLCPLNAVE----VTRLLKALGAPKIARIYWAGGEPLGGK 408 (455)
Q Consensus 338 ~~g~e~--~El~~~~R~~~~~~~---~~~~~i~~~~~R~~G~CPLTPeE----Vgl~LrALGf~~~T~IYlAsGeiYGg~ 408 (455)
.+-... ..+.+ .+.-. .....++ ...|==+-++ +...++.+ +-..||||+.. +
T Consensus 229 ~hlk~~~~~~lfa-----SPQC~Gy~~~~~~lt------~emClPSle~I~rqIk~~vk~~---~lksVFIATDa----~ 290 (362)
T 3zy2_A 229 EHIDTTTNRPLFA-----SEQCLGEGHHLGTLT------KEICSPSKQQILEQIVEKVGSI---GAKSVFVASDK----D 290 (362)
T ss_dssp HTCCTTTCCCCTT-----THHHHCGGGTTCCCC------HHHHSCCHHHHHHHHHHHHHHH---TCSEEEEEESS----C
T ss_pred hhhccccCccccc-----CCcccCCcccCcccc------hhccCCCHHHHHHHHHHHHHhc---CCcEEEEecCC----H
Confidence 653110 00000 00000 0000011 0124112222 44555665 46789999984 4
Q ss_pred cccccHHhhCCC
Q 012839 409 EALLPLITEFPH 420 (455)
Q Consensus 409 ~~L~pL~~~FPn 420 (455)
..++-|+++|+.
T Consensus 291 ~~~~ELk~~L~~ 302 (362)
T 3zy2_A 291 HMIDEINEALKP 302 (362)
T ss_dssp CCHHHHHHHHGG
T ss_pred HHHHHHHHHhhc
Confidence 467889999985
No 3
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=92.68 E-value=0.52 Score=45.56 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=35.3
Q ss_pred CcceEEEEEcCCchhhHHHHHHHHHHHHHhCCeEeecccc
Q 012839 157 RRKYLLVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQ 196 (455)
Q Consensus 157 snGYL~V~~nGGLNQqR~~IcDAVaVARiLNATLViP~Ld 196 (455)
+..||++...|||-.|--+++.|-++|...|.+|+|--..
T Consensus 3 ~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~ 42 (330)
T 2hhc_A 3 KERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG 42 (330)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC
Confidence 4579999999999888899999999999999999886443
No 4
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=62.08 E-value=1e+02 Score=32.54 Aligned_cols=139 Identities=17% Similarity=0.210 Sum_probs=79.4
Q ss_pred cceEEEEE--cCCchhhHHHHHHHHHHHHHhCCeEeecccccccccCC-CCCCCCCCChHHHHHhccCCeEEeccCcccc
Q 012839 158 RKYLLVVV--SGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGD-ESEFSDIFDLEHFKSVLANDVRIVSSLPSTH 234 (455)
Q Consensus 158 nGYL~V~~--nGGLNQqR~~IcDAVaVARiLNATLViP~Ld~~s~W~D-~S~F~DIFDvdhFI~sL~~DVrIVk~LP~~~ 234 (455)
..||+... ..|+--+-..++=+.++|-.+|-||||-.=. |.- ...|.++|+. +....... |
T Consensus 145 aK~Lv~~~~~~~GfGs~lh~l~~~L~~A~~~~Rtliidd~~----w~Y~~g~w~~yF~P--~s~~C~~~-------~--- 208 (526)
T 2de0_X 145 AKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQN----WRYATGGWETVFRP--VSETCTDR-------S--- 208 (526)
T ss_dssp SCEEEEECCCSSCHHHHHHHHHHHHHHHHHHTCEEEEECTT----CSSCTTCGGGTBCC--SCSSCCCC-------C---
T ss_pred CCEEEEEecCCCchHHHHHHHHHHHHHHHhhCCEEEEECCC----CCcCCCCHHHhhhC--cCccccCC-------C---
Confidence 47888876 4688888888888899999999999994422 432 2467777763 11111100 0
Q ss_pred cccCCcccccCCCCCChhhHHhHhhHhhhccceEEEeccc--cc---cC-CCCchhh----hhhh---------hhhccc
Q 012839 235 IMTRPVEEKRTPLHVSPQWIRARYLRRLNREGVLLLRGLD--SR---LS-KDLPSDL----QKLR---------CKVAFH 295 (455)
Q Consensus 235 ~~~~~~~~~~vp~~~spswy~~~vlP~L~k~~VI~l~~~d--~R---La-~~lP~ei----QrLR---------Crvnf~ 295 (455)
......|-.... -..+.||.+.-.+ ++ .. ..+|.++ +++. +.+. .
T Consensus 209 ------------~~~~~~w~~~~~---~~~~~vV~~~~i~~~~~~~~~~~~~~P~~~~~~L~~l~~dp~~w~~~q~~~-y 272 (526)
T 2de0_X 209 ------------GISTGHWSGEVK---DKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVK-Y 272 (526)
T ss_dssp ------------CSCCCBCCCTTG---GGGCSEEEECCGGGCSSCCSCCTTCEEGGGHHHHHHHCSCHHHHHHHHHHH-H
T ss_pred ------------ccccCCCCCccc---CCCcceEEeeccccccccccccccccchhHHHHHHhccCCcHHHHHHHHHH-H
Confidence 000011211000 1234555443221 11 11 1455443 3332 1111 1
Q ss_pred ceeechhHHHHHHHHHHHHHcCCCeeeeecccc
Q 012839 296 ALRFAPPILQLGNKLAERMRSKGPYLSLHLRME 328 (455)
Q Consensus 296 ALrF~p~I~~Lg~~LV~Rmr~~GpyIALHLRfE 328 (455)
-+|++++|++.-+.+.+.+.-.+|.|+||.|-=
T Consensus 273 l~rP~~~i~~~I~~~~~~l~~~~piVGVHIRrG 305 (526)
T 2de0_X 273 LIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRT 305 (526)
T ss_dssp HTCBCHHHHHHHHHHHHHHTCCSSEEEEEECCC
T ss_pred HcCCCHHHHHHHHHHHHHhCCCCCEEEEEEeCC
Confidence 278999999999999988866789999999954
No 5
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=34.43 E-value=16 Score=27.12 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=21.3
Q ss_pred ceeechhHHHHHHHHHHHHHcCCCee
Q 012839 296 ALRFAPPILQLGNKLAERMRSKGPYL 321 (455)
Q Consensus 296 ALrF~p~I~~Lg~~LV~Rmr~~GpyI 321 (455)
|+-|+.-+.++|..+|.||++...|.
T Consensus 2 ~vpfQs~LD~vG~qiVrkmKtGe~Ff 27 (45)
T 3l32_A 2 NLLFQSYLDNVGVQIVRQMRSGERFL 27 (45)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTCCHH
T ss_pred CccHHHHHHHHHHHHHHHHHccccHH
Confidence 45577788999999999999876664
No 6
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=19.93 E-value=53 Score=31.90 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=25.6
Q ss_pred hhcCCCCCCCHHHH----HHHHHHhCCCCCceEEEeeCCCCCCc
Q 012839 369 RKLAGLCPLNAVEV----TRLLKALGAPKIARIYWAGGEPLGGK 408 (455)
Q Consensus 369 ~R~~G~CPLTPeEV----gl~LrALGf~~~T~IYlAsGeiYGg~ 408 (455)
+|+.|.| -|. +.+|++|||+ +|..+|.++.+.
T Consensus 76 ~~RGGyC----~ElN~Lf~~~L~~LGF~----V~~~~arV~~~~ 111 (293)
T 3d9w_A 76 SRRGGYC----YENAGLFAAALERLGFG----VTGHTGRVTMGA 111 (293)
T ss_dssp SSCCBCH----HHHHHHHHHHHHHTTCE----EEEEEEEECTTC
T ss_pred cCCCcCh----HHHHHHHHHHHHHcCCe----EEEEEEEEecCC
Confidence 4568999 884 5789999994 888888888654
No 7
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=19.91 E-value=50 Score=31.84 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=23.7
Q ss_pred hhcCCCCCCCHHHH----HHHHHHhCCCCCceEEEeeCCCCCC
Q 012839 369 RKLAGLCPLNAVEV----TRLLKALGAPKIARIYWAGGEPLGG 407 (455)
Q Consensus 369 ~R~~G~CPLTPeEV----gl~LrALGf~~~T~IYlAsGeiYGg 407 (455)
+|+.|.| -|. +.+|++|||+ +|..+|.||.+
T Consensus 66 ~~RGGyC----~ElN~Lf~~~L~~LGF~----V~~~~~rV~~~ 100 (284)
T 1e2t_A 66 ARRGGYC----FELNGLFERALRDIGFN----VRSLLGRVILS 100 (284)
T ss_dssp TCCCBCH----HHHHHHHHHHHHHTTCC----EEEEEEEECTT
T ss_pred CCCcEEh----HHHHHHHHHHHHHCCCe----EEEEEEEEecC
Confidence 5669999 884 5789999996 67777777643
No 8
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=19.58 E-value=1.4e+02 Score=20.76 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=21.8
Q ss_pred eEEEEEcCCchh-hHHHHHHHH--HHHHHhCC
Q 012839 160 YLLVVVSGGMNQ-QRNQIVDAV--VIARILGA 188 (455)
Q Consensus 160 YL~V~~nGGLNQ-qR~~IcDAV--aVARiLNA 188 (455)
|+.|..++|.+. |+.++++++ ++++.||.
T Consensus 5 ~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~ 36 (63)
T 2x4k_A 5 IVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGA 36 (63)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 688999999855 588888877 56666664
No 9
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=19.18 E-value=23 Score=27.07 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=11.1
Q ss_pred cccccHHhhCCCCc
Q 012839 409 EALLPLITEFPHLY 422 (455)
Q Consensus 409 ~~L~pL~~~FPnl~ 422 (455)
..+..|++|||++-
T Consensus 14 ~~~~~L~~MFP~lD 27 (54)
T 1p3q_Q 14 DTLNTLQNMFPDMD 27 (54)
T ss_dssp HHHHHHHHHSTTSC
T ss_pred HHHHHHHHHcccCC
Confidence 34678999999873
No 10
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=18.39 E-value=58 Score=31.75 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=23.5
Q ss_pred hhcCCCCCCCHHHH----HHHHHHhCCCCCceEEEeeCCCCC
Q 012839 369 RKLAGLCPLNAVEV----TRLLKALGAPKIARIYWAGGEPLG 406 (455)
Q Consensus 369 ~R~~G~CPLTPeEV----gl~LrALGf~~~T~IYlAsGeiYG 406 (455)
+|+.|.| -|. +.+|++|||+ +|..+|.||.
T Consensus 87 ~~RGGyC----~ElN~Lf~~~L~~LGF~----V~~l~arV~~ 120 (299)
T 1w4t_A 87 GSRGGYC----FELNSLFARLLLALGYE----LELLVARVRW 120 (299)
T ss_dssp TTCCBCH----HHHHHHHHHHHHHTTCE----EEEEEEEECT
T ss_pred cCCCcch----HhHHHHHHHHHHHcCCe----EEEEEEEEEe
Confidence 5669999 884 5789999995 7777777764
Done!