Query 012841
Match_columns 455
No_of_seqs 238 out of 1367
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 17:16:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012841.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012841hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.1E-45 3.9E-50 382.7 19.0 290 1-294 55-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 5.3E-43 1.8E-47 361.5 21.3 289 1-300 56-398 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 4.7E-42 1.6E-46 352.0 20.9 288 3-296 43-374 (381)
4 1j71_A Candidapepsin, aspartic 100.0 1.2E-41 4.2E-46 342.7 22.8 244 21-301 76-330 (334)
5 2qzx_A Candidapepsin-5; aspart 100.0 2.2E-41 7.5E-46 341.8 22.5 252 21-304 76-340 (342)
6 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-41 7E-46 341.4 21.9 249 22-303 71-337 (339)
7 1tzs_A Cathepsin E; hydrolase, 100.0 3.2E-41 1.1E-45 342.0 23.4 253 20-299 77-346 (351)
8 3pvk_A Candidapepsin-2; hydrol 100.0 2.6E-41 9E-46 340.8 21.9 252 22-304 77-340 (342)
9 2x0b_A Renin; hydrolase-hormon 100.0 1.9E-41 6.6E-46 347.7 19.4 247 21-295 118-383 (383)
10 3psg_A Pepsinogen; hydrolase(a 100.0 2.1E-41 7.3E-46 345.9 19.3 245 21-295 111-370 (370)
11 3cms_A Chymosin B; hydrolase, 100.0 8.8E-41 3E-45 335.0 20.7 244 21-295 69-323 (323)
12 4aa9_A Chymosin; hydrolase, as 100.0 1E-40 3.6E-45 333.6 21.1 244 21-295 66-320 (320)
13 1dpj_A Proteinase A; proteinas 100.0 5.1E-40 1.7E-44 330.1 24.3 244 21-295 68-329 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 1.9E-40 6.6E-45 337.3 20.6 252 22-299 75-359 (361)
15 3k1w_A Renin; protease, altern 100.0 1.7E-40 5.8E-45 334.7 19.6 247 21-295 75-340 (341)
16 1am5_A Pepsin, acid proteinase 100.0 3.5E-40 1.2E-44 330.7 21.1 243 21-295 67-324 (324)
17 2apr_A Rhizopuspepsin; hydrola 100.0 7E-40 2.4E-44 328.8 22.6 243 21-294 69-323 (325)
18 1yg9_A Aspartic protease BLA G 100.0 3E-40 1E-44 332.2 19.4 245 22-295 72-329 (330)
19 1miq_A Plasmepsin; aspartic pr 100.0 3.8E-40 1.3E-44 337.2 20.4 242 21-294 117-373 (375)
20 1htr_B Gastricsin; aspartyl pr 100.0 4.8E-40 1.6E-44 330.3 20.7 246 21-295 67-329 (329)
21 3c9x_A Trichoderma reesei aspa 100.0 5.4E-40 1.9E-44 330.1 20.6 243 21-293 71-328 (329)
22 1oew_A Endothiapepsin; hydrola 100.0 4.6E-40 1.6E-44 330.7 18.5 244 21-294 70-329 (329)
23 3lpj_A Beta-secretase 1; alzhe 100.0 2.1E-39 7.3E-44 339.6 21.9 299 3-309 97-435 (455)
24 1qdm_A Prophytepsin; aspartic 100.0 1.8E-39 6.1E-44 341.9 20.7 264 21-294 108-477 (478)
25 3vf3_A Beta-secretase 1; struc 100.0 6.8E-39 2.3E-43 330.4 24.6 289 3-300 51-379 (402)
26 2ewy_A Beta-secretase 2; BACE2 100.0 3.6E-39 1.2E-43 330.3 21.9 270 22-299 65-359 (383)
27 2qp8_A Beta-secretase 1; BACE1 100.0 6.9E-39 2.4E-43 329.8 22.9 269 22-299 73-371 (395)
28 1ibq_A Aspergillopepsin; aspar 100.0 3.9E-39 1.3E-43 323.4 19.6 245 21-294 66-324 (325)
29 3qvc_A Histo-aspartic protease 100.0 4.9E-39 1.7E-43 336.0 18.1 243 21-295 192-449 (451)
30 1wkr_A Polyporopepsin; hydrola 100.0 1.4E-38 4.7E-43 321.1 20.7 266 3-299 35-337 (340)
31 1izd_A Aspartic proteinase; su 100.0 1.7E-38 5.9E-43 318.5 19.8 242 21-294 67-322 (323)
32 1bxo_A Protein (penicillopepsi 100.0 1.4E-38 4.7E-43 319.2 18.4 241 21-294 67-322 (323)
33 2bju_A Plasmepsin II; aspartic 100.0 1.4E-38 4.9E-43 332.4 15.9 243 21-295 193-450 (453)
34 1lya_B Cathepsin D; lysosomal 100.0 5.2E-37 1.8E-41 294.9 21.2 222 52-295 3-241 (241)
35 1b5f_A Protein (cardosin A); h 99.9 4.9E-26 1.7E-30 218.6 13.6 161 22-190 70-237 (239)
36 1b5f_B Protein (cardosin A); h 99.6 4.5E-16 1.5E-20 125.8 6.7 72 223-295 11-87 (87)
37 1lya_A Cathepsin D; lysosomal 96.3 0.0027 9.3E-08 51.5 3.8 27 21-48 70-96 (97)
38 3s8i_A Protein DDI1 homolog 1; 93.6 0.069 2.4E-06 46.6 4.9 112 137-294 23-135 (148)
39 2i1a_A DNA damage-inducible pr 92.7 0.11 3.9E-06 44.7 4.8 27 266-292 108-134 (148)
40 3re3_A 2-C-methyl-D-erythritol 39.0 43 0.0015 29.3 5.2 49 341-391 93-141 (162)
41 1iv3_A 2-C-methyl-D-erythritol 38.7 44 0.0015 28.9 5.2 49 341-391 87-135 (152)
42 2pmp_A 2-C-methyl-D-erythritol 37.8 45 0.0016 29.0 5.2 50 341-392 90-139 (160)
43 1gx1_A 2-C-methyl-D-erythritol 37.5 47 0.0016 28.9 5.3 50 341-392 88-137 (160)
44 1t0a_A 2C-methyl-D-erythritol 37.2 48 0.0016 28.8 5.3 49 341-391 89-137 (159)
45 3rnm_E Lipoamide acyltransfera 33.8 17 0.00057 26.2 1.5 23 362-384 7-29 (58)
46 3f0d_A 2-C-methyl-D-erythritol 33.6 56 0.0019 29.0 5.2 49 341-391 110-158 (183)
47 1lya_A Cathepsin D; lysosomal 29.4 44 0.0015 26.2 3.5 16 165-180 29-44 (97)
48 3b6n_A 2-C-methyl-D-erythritol 29.2 38 0.0013 30.2 3.3 50 341-392 115-164 (187)
49 2kvr_A Ubiquitin carboxyl-term 26.4 27 0.00091 29.3 1.8 36 362-397 65-100 (130)
50 1w4i_A Pyruvate dehydrogenase 24.7 29 0.001 25.1 1.5 25 360-384 2-26 (62)
51 2uzh_A 2C-methyl-D-erythritol 24.2 90 0.0031 27.2 4.8 47 341-395 92-138 (165)
52 1bal_A Dihydrolipoamide succin 23.2 28 0.00097 24.0 1.1 26 359-384 6-31 (51)
53 2eq9_C Pyruvate dehydrogenase 21.8 32 0.0011 22.3 1.1 18 366-383 4-21 (41)
54 2eq8_C Pyruvate dehydrogenase 21.3 35 0.0012 22.0 1.2 18 366-383 3-20 (40)
55 2eq7_C 2-oxoglutarate dehydrog 21.3 32 0.0011 22.2 1.0 18 366-383 3-20 (40)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-45 Score=382.72 Aligned_cols=290 Identities=22% Similarity=0.407 Sum_probs=228.5
Q ss_pred CCCccccccCCCC-C------CC---CC------CCCCceEEEEe-CCCceEEEEEEEEEEEeCCCC------cccccce
Q 012841 1 MSNTYQALKCNPD-C------NC---DN------DRKECIYERRY-AEMSTSSGVLGVDVISFGNES------ELVPQRA 57 (455)
Q Consensus 1 ~SsT~~~v~C~~~-C------~C---~~------~~~~C~y~i~Y-~dGs~~sG~~~~D~v~ig~~~------~~~~~~~ 57 (455)
+||||++++|++. | .| .+ .++.|.|++.| +++++++|++++|+|+|++.. .++++++
T Consensus 55 ~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~ 134 (413)
T 3vla_A 55 VSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134 (413)
T ss_dssp CCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEE
T ss_pred CCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCE
Confidence 5899999999962 4 13 22 24579999999 488888999999999997311 1467889
Q ss_pred EEEEEEeccCCCCCCCCceEEeeCCCCCChHHHHHhcCCCCCceEEeecCCCCCCceEEECCCCCCC--------C-cee
Q 012841 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP--------D-MVF 128 (455)
Q Consensus 58 ~fG~~~~~s~~~~~~~~dGILGLG~~~~S~~~qL~~~g~I~~~FSl~L~~~~~~~G~I~fGg~d~s~--------~-~~~ 128 (455)
.|||++.+........+|||||||++.+|++.||.++++|+++||+||.+....+|.|+|||.|..+ . ..+
T Consensus 135 ~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~ 214 (413)
T 3vla_A 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTY 214 (413)
T ss_dssp EEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEE
T ss_pred EEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeE
Confidence 9999998742222346899999999999999999999988899999999865568999999998631 2 455
Q ss_pred eecCCCC------------CCceEEEeeeeEEcCEEeeeCCcccc----CCCcEEEccccceeeecHHHHHHHHHHHHHh
Q 012841 129 SHSDPFR------------SPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192 (455)
Q Consensus 129 ~~~~~~~------------~~~w~V~l~~I~Vgg~~l~l~~~~f~----~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~ 192 (455)
+++.... ..+|.|+|++|.||++.+.++...|. +++.+||||||++++||+++|++|+++|.++
T Consensus 215 tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 215 TPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp EECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred eecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 5543221 26999999999999999988776663 4568999999999999999999999999987
Q ss_pred cc--ccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcC-CeEEEeCCCCceEEecccCCeEEEEEEEcC---CC
Q 012841 193 TH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNS---DS 266 (455)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~-g~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~~---~~ 266 (455)
+. .+++..+ ..+++.||+.....-...+..+|+|+|+|++ +++|.|++++|+++... +.+|++++... .+
T Consensus 295 ~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~ 370 (413)
T 3vla_A 295 SAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRT 370 (413)
T ss_dssp HHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSS
T ss_pred hcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCccc
Confidence 64 2333321 2346789865432211233589999999954 49999999999998653 67999877654 26
Q ss_pred CeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 267 TTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 267 ~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
.||||+.|||++|+|||++++|||||++
T Consensus 371 ~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 371 SIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 8999999999999999999999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.3e-43 Score=361.53 Aligned_cols=289 Identities=21% Similarity=0.425 Sum_probs=218.2
Q ss_pred CCCccccccCCC-CC---------CCCCC------CCCceEEEEeC-CCceEEEEEEEEEEEeCCCC--c------cccc
Q 012841 1 MSNTYQALKCNP-DC---------NCDND------RKECIYERRYA-EMSTSSGVLGVDVISFGNES--E------LVPQ 55 (455)
Q Consensus 1 ~SsT~~~v~C~~-~C---------~C~~~------~~~C~y~i~Y~-dGs~~sG~~~~D~v~ig~~~--~------~~~~ 55 (455)
.||||++++|.+ .| .|.++ ++.|+|.+.|+ +++.++|.+++|+|+|++.. . ++++
T Consensus 56 ~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~ 135 (403)
T 3aup_A 56 SSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP 135 (403)
T ss_dssp CCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEE
T ss_pred CCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCcccccccccccc
Confidence 589999999985 24 13222 36899999998 78889999999999998721 1 4678
Q ss_pred ceEEEEEEeccCC-CCCCCCceEEeeCCCCCChHHHHHhcCCCCCceEEeecCCCCCCceEEECCCCCCCC----c----
Q 012841 56 RAVFGCENLETGD-LYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPD----M---- 126 (455)
Q Consensus 56 ~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~S~~~qL~~~g~I~~~FSl~L~~~~~~~G~I~fGg~d~s~~----~---- 126 (455)
++.|||++.+... ......|||||||++.++++.||.+..+.+++||+||.+....+|.|+||| |+.+. +
T Consensus 136 ~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~ 214 (403)
T 3aup_A 136 QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIF 214 (403)
T ss_dssp EEEEEEECGGGGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTT
T ss_pred CEEEECCcccccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccccccc
Confidence 8999999987543 334578999999999999999997655555899999988655689999999 76432 1
Q ss_pred -eeeecCCCC--CCceEEEeeeeEEcCEEe-eeCCcccc----CCCcEEEccccceeeecHHHHHHHHHHHHHhcccccc
Q 012841 127 -VFSHSDPFR--SPYYNIELKELRVAGKPL-KVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKR 198 (455)
Q Consensus 127 -~~~~~~~~~--~~~w~V~l~~I~Vgg~~l-~l~~~~f~----~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~ 198 (455)
.+.|.+... ..+|.|.|++|.||++.+ .++...+. +...+||||||++++||+++|++|+++|.+++....+
T Consensus 215 ~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~ 294 (403)
T 3aup_A 215 HDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ 294 (403)
T ss_dssp TTEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGE
T ss_pred CceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccc
Confidence 445544333 379999999999999988 66654441 3457999999999999999999999999877654333
Q ss_pred ccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCC--eEEEeCCCCceEEecccCCeEEEEEEEcCC---CCeeecce
Q 012841 199 IRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG--QKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLGGI 273 (455)
Q Consensus 199 ~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g--~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~~~---~~~ILG~~ 273 (455)
.... .....|++ |+.. ..+|+|+|+|+++ ++|.|++++|+++... +..|+++..... +.||||+.
T Consensus 295 ~~~~--~~~~~c~~-----c~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~ 364 (403)
T 3aup_A 295 VKSV--APFGLCFN-----SNKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGAR 364 (403)
T ss_dssp ECCC--TTCSCEEC-----GGGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHH
T ss_pred cCCC--CCCCceEE-----CCCc-CcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChH
Confidence 3211 12346753 4433 3799999999655 6999999999997642 678996655442 58999999
Q ss_pred eeeeEEEEEECCCCEEEE-------eecCCCccc
Q 012841 274 VVRNTLVTYDRGNDKVGF-------WKTNCSELW 300 (455)
Q Consensus 274 Flr~~yvVFD~en~rIGF-------a~s~C~~~~ 300 (455)
|||++|+|||++++|||| ++++|....
T Consensus 365 fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~~ 398 (403)
T 3aup_A 365 QLEENLVVFDLARSRVGFSTSSLHSHGVKCADLF 398 (403)
T ss_dssp HHTTSCEEEETTTTEEEEESSCGGGGTCCGGGSC
T ss_pred HhcCeEEEEECCCCEEEEecccccccCCCccccc
Confidence 999999999999999999 677887653
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.7e-42 Score=351.95 Aligned_cols=288 Identities=17% Similarity=0.321 Sum_probs=215.9
Q ss_pred CccccccCCC-CC---------CCCC-------CCCCc-eEEEEeCCCceEEEEEEEEEEEeCCCC-cccccce----EE
Q 012841 3 NTYQALKCNP-DC---------NCDN-------DRKEC-IYERRYAEMSTSSGVLGVDVISFGNES-ELVPQRA----VF 59 (455)
Q Consensus 3 sT~~~v~C~~-~C---------~C~~-------~~~~C-~y~i~Y~dGs~~sG~~~~D~v~ig~~~-~~~~~~~----~f 59 (455)
.+|++++|++ .| .|.. .+..| .|.++|++|+.++|.+++|+|++++.. .+++.++ .|
T Consensus 43 ~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~F 122 (381)
T 1t6e_X 43 QPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLA 122 (381)
T ss_dssp CCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred CCCCccCCCCchhccccCCCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEe
Confidence 3567788874 24 3653 24578 599999999888999999999998521 1344443 67
Q ss_pred EEEEeccCCCCCCCCceEEeeCCCCCChHHHHHhcCCCCCceEEeecCCCCCCceEEECCCCCC---C--CceeeecCCC
Q 012841 60 GCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPP---P--DMVFSHSDPF 134 (455)
Q Consensus 60 G~~~~~s~~~~~~~~dGILGLG~~~~S~~~qL~~~g~I~~~FSl~L~~~~~~~G~I~fGg~d~s---~--~~~~~~~~~~ 134 (455)
||+..+........+|||||||++.+|++.||.++++++++||+||.+. .+|+|+|||+|.. + ...++++...
T Consensus 123 g~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~ 200 (381)
T 1t6e_X 123 ACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTK 200 (381)
T ss_dssp EECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCC
T ss_pred ecCcccccCCCCCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccC
Confidence 9998763221235689999999999999999999997789999999874 6799999998764 1 3455554321
Q ss_pred -CCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhcc-------ccccccCCCCCc
Q 012841 135 -RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH-------VLKRIRGPDPNY 206 (455)
Q Consensus 135 -~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~-------~~~~~~~~~~~~ 206 (455)
...+|.|.+++|.||++.+.++...|. ++.+||||||++++||+++|++|.++|.+++. .+.+.. .....
T Consensus 201 ~~~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~-~~~~~ 278 (381)
T 1t6e_X 201 GGSPAHYISARSIVVGDTRVPVPEGALA-TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAV-EAVAP 278 (381)
T ss_dssp TTCCSCEECEEEEEETTEECCCCTTCSC-TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEE-CCCTT
T ss_pred CCCcceEEEEEEEEEcCEEecCCHHHcc-CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccC-CCCCC
Confidence 124677999999999999887765553 45899999999999999999999999988764 122221 11123
Q ss_pred ccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecccCCeEEEEEEEcCC--------CCeeecceeeeeE
Q 012841 207 DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSD--------STTLLGGIVVRNT 278 (455)
Q Consensus 207 ~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~~~--------~~~ILG~~Flr~~ 278 (455)
.+.|++.....-......+|+|+|+|++|++|.|++++|+++... +..|+++..... +.||||+.|||++
T Consensus 279 ~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~ 356 (381)
T 1t6e_X 279 FGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDF 356 (381)
T ss_dssp CSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTE
T ss_pred CCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCc
Confidence 578975432111111237999999996679999999999998643 679998665543 5899999999999
Q ss_pred EEEEECCCCEEEEeecCC
Q 012841 279 LVTYDRGNDKVGFWKTNC 296 (455)
Q Consensus 279 yvVFD~en~rIGFa~s~C 296 (455)
|+|||++++|||||++..
T Consensus 357 yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 357 VLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEEETTTTEEEEEECCT
T ss_pred EEEEECCCCEEEEecccC
Confidence 999999999999998753
No 4
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-41 Score=342.75 Aligned_cols=244 Identities=19% Similarity=0.329 Sum_probs=206.7
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCCC--------ChHHHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~~--------S~~~qL~ 92 (455)
..|.|.+.|++|+.++|.+++|+|++++ +++.++.|||++... ..|||||||++.+ +++++|+
T Consensus 76 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~ 146 (334)
T 1j71_A 76 LNQDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTS------VDQGIMGIGFTADEAGYNLYDNVPVTLK 146 (334)
T ss_dssp EEEEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGSSTTCCCCCHHHHHH
T ss_pred CCCceEEEECCCCEEEEEEEEEEEEECC---EEEccEEEEEEEecC------CCccEEEEcCCcccCccccCCcHHHHHH
Confidence 3789999999999889999999999997 578899999999764 4799999999765 7999999
Q ss_pred hcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEcc
Q 012841 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (455)
Q Consensus 93 ~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDS 170 (455)
++|+|+ ++||+||.+.+...|.|+|||+|+++ .+.+.|++.....+|.|.+++|.|+++.+.. +..++|||
T Consensus 147 ~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDS 219 (334)
T 1j71_A 147 KQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-------NADVVLDS 219 (334)
T ss_dssp HTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred HCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC-------CccEEEeC
Confidence 999998 89999998765568999999999987 4566666666678999999999999998753 24799999
Q ss_pred ccceeeecHHHHHHHHHHHHHhccccccccCCCCCcc-cccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 012841 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYD-DICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (455)
Q Consensus 171 GTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~ 249 (455)
||++++||++++++|.+++.+... .....|. .+|+ .+|+|+|+|.+|.++.|++++|+++.
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~------~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~y~~~~ 281 (334)
T 1j71_A 220 GTTITYFSQSTADKFARIVGATWD------SRNEIYRLPSCD------------LSGDAVFNFDQGVKITVPLSELILKD 281 (334)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSSSC------------CCSEEEEEESTTCEEEEEGGGGEEEC
T ss_pred CCCcEecCHHHHHHHHHHcCCccc------CCCceEEEEcCC------------CCCceEEEEcCCcEEEECHHHheeec
Confidence 999999999999999999965542 1112344 5663 48999999977899999999999986
Q ss_pred cccCCeEEEEEEEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCcccc
Q 012841 250 MKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301 (455)
Q Consensus 250 ~~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~~~ 301 (455)
.+ +..|++.+... +.||||++|||++|+|||++++|||||+++|...++
T Consensus 282 ~~--~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~ 330 (334)
T 1j71_A 282 SD--SSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSD 330 (334)
T ss_dssp SS--SSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCC
T ss_pred CC--CCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccc
Confidence 43 44599887765 579999999999999999999999999999986544
No 5
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.2e-41 Score=341.82 Aligned_cols=252 Identities=19% Similarity=0.319 Sum_probs=208.1
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCCC--------ChHHHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~~--------S~~~qL~ 92 (455)
..|.|.+.|++|+.++|.+++|+|++++ +++.++.|||++... ..|||||||++.+ +++++|+
T Consensus 76 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~ 146 (342)
T 2qzx_A 76 LNTRFDIKYGDGSYAKGKLYKDTVGIGG---VSVRDQLFANVWSTS------ARKGILGIGFQSGEATEFDYDNLPISLR 146 (342)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEEC------SSSCEEECSCGGGCSSSSCCCCHHHHHH
T ss_pred CCCcEEEEeCCCCeEEEEEEEEEEEECC---EEecceEEEEEEecC------CCcCEEEEccccccCCCccCccHHHHHH
Confidence 3789999999999889999999999997 578899999999764 4799999999764 7999999
Q ss_pred hcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEcc
Q 012841 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (455)
Q Consensus 93 ~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDS 170 (455)
++|+|+ ++||+||.+.+...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.. ...++|||
T Consensus 147 ~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDS 219 (342)
T 2qzx_A 147 NQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA-------NTNVLLDS 219 (342)
T ss_dssp HTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred HCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC-------CcCEEEeC
Confidence 999998 89999998765568999999999987 4556666666677999999999999998753 24799999
Q ss_pred ccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEec
Q 012841 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (455)
Q Consensus 171 GTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~ 250 (455)
||++++||++++++|.+++.+.... .......|..+|+ .+|+|+|+|.+|.++.|++++|+++..
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~~~~~~~ 284 (342)
T 2qzx_A 220 GTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADCK------------TSGTIDFQFGNNLKISVPVSEFLFQTY 284 (342)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECTT------------CCCEEEEEETTTEEEEEEGGGGEECCB
T ss_pred CCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEECC------------CCCcEEEEECCCcEEEEcHHHhccccc
Confidence 9999999999999999999665421 0011113445562 489999999778999999999998743
Q ss_pred ---ccCCeEEEEEEEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCccccccc
Q 012841 251 ---KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (455)
Q Consensus 251 ---~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~~~~~~ 304 (455)
...+..|++.+... +.||||++|||++|+|||++++|||||+++|...++..+
T Consensus 285 ~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 340 (342)
T 2qzx_A 285 YTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVA 340 (342)
T ss_dssp CTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred ccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEE
Confidence 11246899988765 579999999999999999999999999999986555433
No 6
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.1e-41 Score=341.36 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=208.3
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCCC----------------
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL---------------- 85 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~~---------------- 85 (455)
.|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++..++ .+||||||++.+
T Consensus 71 ~~~~~i~Yg~gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~~~~~~ 141 (339)
T 3fv3_A 71 GAAFTIRYGDGSTSQGTWGKDTVTING---VSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQTTPNYD 141 (339)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBCSCCCC
T ss_pred CceEEEEECCCceEEEEEEEEEEEECC---EEECceEEEEEEecCC------CceeEEecCccccccccccccccCccCC
Confidence 799999999998899999999999998 5788999999998764 699999999764
Q ss_pred ChHHHHHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCC
Q 012841 86 SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGG 163 (455)
Q Consensus 86 S~~~qL~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~ 163 (455)
+++++|+++|+|+ ++||+||++.+...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+..+
T Consensus 142 ~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~------- 214 (339)
T 3fv3_A 142 NVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSFG------- 214 (339)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEEE-------
T ss_pred cHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecCC-------
Confidence 2899999999998 89999999866668999999999987 45556665566779999999999999987642
Q ss_pred CcEEEccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCC
Q 012841 164 HGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPE 243 (455)
Q Consensus 164 ~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~ 243 (455)
..++|||||++++||++++++|.+++.+..... ......|..+|+. ..+|+|+|+|++|.++.|+++
T Consensus 215 ~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~----------~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 215 DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNT----------DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTC----------CCCSEEEEEETTSCEEEEEGG
T ss_pred ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCC----------CCCCcEEEEECCCCEEEECHH
Confidence 479999999999999999999999997554311 0112245567752 368999999966899999999
Q ss_pred CceEEecccCCeEEEEEEEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCcccccc
Q 012841 244 NYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRL 303 (455)
Q Consensus 244 ~Yi~~~~~~~~~~Cl~~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~~~~~ 303 (455)
+|+.+.. ...|+..+.. ++.||||++|||++|+|||++++|||||+++|.+.++..
T Consensus 282 ~~~~~~~---~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~ 337 (339)
T 3fv3_A 282 EYVYQNG---DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSIS 337 (339)
T ss_dssp GGEEECS---SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEE
T ss_pred HheeeCC---CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceE
Confidence 9998753 4578766665 578999999999999999999999999999999654443
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=341.99 Aligned_cols=253 Identities=25% Similarity=0.433 Sum_probs=203.0
Q ss_pred CCCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCC-CCCCceEEeeCCCCC------ChHHHHH
Q 012841 20 RKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL------SVVDQLV 92 (455)
Q Consensus 20 ~~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~-~~~~dGILGLG~~~~------S~~~qL~ 92 (455)
...|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||+..+.+..+ ....|||||||++.+ +++++|+
T Consensus 77 ~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 152 (351)
T 1tzs_A 77 QPGQSFSIQYGTGS-LSGIIGADQVSVEG---LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMM 152 (351)
T ss_dssp CCSCEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHH
T ss_pred ECCCEEEEEeCCCC-eEEEEEEeEEEECC---eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHH
Confidence 35799999999997 69999999999998 5778999999998766433 457899999999875 4899999
Q ss_pred hcCCCC-CceEEeecCCCCC--CceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 93 EKGVIS-DSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 93 ~~g~I~-~~FSl~L~~~~~~--~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
++|+|. ++||+||++.... +|.|+|||+|+++ .+.+.|++.....+|.|.+++|.|+++.+.. ..+..++|
T Consensus 153 ~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aii 227 (351)
T 1tzs_A 153 AQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFC-----SEGCQAIV 227 (351)
T ss_dssp HTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEEC-----TTCEEEEE
T ss_pred HCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEc-----CCCceEEe
Confidence 999998 8999999986433 7999999999986 4555665555678999999999999987632 23468999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||++++||++++++|.+++.+... . ..|..+|+. . ..+|+|+|+| +|.++.|++++|+++
T Consensus 228 DSGTs~~~lP~~~~~~l~~~~~~~~~-------~-g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~yi~~ 289 (351)
T 1tzs_A 228 DTGTSLITGPSDKIKQLQNAIGAAPV-------D-GEYAVECAN--------L-NVMPDVTFTI-NGVPYTLSPTAYTLL 289 (351)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEC-------S-SSEEECGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEC
T ss_pred ccCCcceeCCHHHHHHHHHHhCCccc-------C-CeEEEeCCC--------C-ccCCcEEEEE-CCEEEEECHHHhEee
Confidence 99999999999999999999854321 1 345566753 2 3789999999 899999999999987
Q ss_pred ecccCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeecCCCcc
Q 012841 249 HMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~ 299 (455)
....++..|+..+... .+.||||++|||++|+|||++++|||||+++|...
T Consensus 290 ~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 290 DFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp C-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred ccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 6532346899766532 46899999999999999999999999999999763
No 8
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.6e-41 Score=340.79 Aligned_cols=252 Identities=20% Similarity=0.321 Sum_probs=206.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCC-------CChHHHHHhc
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGR-------LSVVDQLVEK 94 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~-------~S~~~qL~~~ 94 (455)
.|.|.+.|++|+.++|.+++|+|+|++ +++.++.|||++... ..|||||||++. .+++++|+++
T Consensus 77 ~~~~~i~Yg~gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~L~~q 147 (342)
T 3pvk_A 77 NTPFKIGYGDGSSSQGTLYKDTVGFGG---VSIKNQVLADVDSTS------IDQGILGVGYKTNEAGGSYDNVPVTLKKQ 147 (342)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGCSSCSSCCHHHHHHHT
T ss_pred CCeEEEEecCCCeEEEEEEEEEEEECC---EEecceEEEEEEccC------CCccEEEecCccccccccCCcHHHHHHhc
Confidence 689999999999889999999999998 578899999998765 479999999987 3699999999
Q ss_pred CCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEcccc
Q 012841 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (455)
Q Consensus 95 g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGT 172 (455)
|+|. ++||+||++.+...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+..+ +..++|||||
T Consensus 148 g~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~------~~~~iiDSGt 221 (342)
T 3pvk_A 148 GVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTD------NVDVLLDSGT 221 (342)
T ss_dssp TSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEE------EEEEEECTTC
T ss_pred CCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCC------CceEEEeCCC
Confidence 9998 89999998766568999999999987 45566666666779999999999999988653 2489999999
Q ss_pred ceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeccc
Q 012841 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (455)
Q Consensus 173 s~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~ 252 (455)
++++||++++++|.++|.+..... ......|..+|+ ..|+|+|+|++|.++.|++++|+++....
T Consensus 222 t~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 222 TITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCN------------LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp SSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSC------------CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred CCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecC------------CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 999999999999999996554210 000112456663 45999999966899999999999874321
Q ss_pred CC---eEEEEEEEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCccccccc
Q 012841 253 SG---AYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (455)
Q Consensus 253 ~~---~~Cl~~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~~~~~~ 304 (455)
.+ ..|+..+.. .+.||||++|||++|+|||++++|||||+++|.+.++..+
T Consensus 287 ~g~~~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~ 340 (342)
T 3pvk_A 287 DGQPYDKCQLLFDV-NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISA 340 (342)
T ss_dssp ------CEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred CCCcCCeeEEEEee-CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEE
Confidence 22 689988877 4789999999999999999999999999999986554443
No 9
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=347.67 Aligned_cols=247 Identities=24% Similarity=0.420 Sum_probs=204.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.++|++|+ ++|.+++|+|+|++ +++. +.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 118 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 192 (383)
T 2x0b_A 118 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 192 (383)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEETT---EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHT
T ss_pred CCcEEEEEcCCcc-EEEEEEeeEEEEcC---ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHh
Confidence 3699999999997 79999999999998 4677 999999987653 33457899999999876 48999999
Q ss_pred cCCCC-CceEEeecCCCCC----CceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEE
Q 012841 94 KGVIS-DSFSLCYGGMDVG----GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~----~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (455)
+|+|+ ++||+||++.... +|.|+|||+|+++ .+.++|++.....+|.|.+++|.||++.+. +..+..++
T Consensus 193 qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-----~~~~~~ai 267 (383)
T 2x0b_A 193 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-----CEDGCLAL 267 (383)
T ss_dssp TTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-----STTCEEEE
T ss_pred CCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-----cCCCcEEE
Confidence 99998 8999999986433 8999999999987 456677766678899999999999998642 23456899
Q ss_pred EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 012841 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (455)
Q Consensus 168 iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~ 247 (455)
|||||+++++|++++++|.++|.+.. ....|..+|+. . ..+|+|+|+| +|.+|.|++++|++
T Consensus 268 iDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~--------~-~~~P~i~f~~-~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 268 VDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNE--------G-PTLPDISFHL-GGKEYTLTSADYVF 329 (383)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGG--------T-TTCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEeccc--------c-ccCceEEEEE-CCEEEEECHHHhEe
Confidence 99999999999999999999985432 22345567753 2 4799999999 89999999999998
Q ss_pred EecccCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 248 RHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+....++..|+..+... .+.||||+.|||++|+|||++|+|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 86543356899766532 4689999999999999999999999999863
No 10
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.1e-41 Score=345.93 Aligned_cols=245 Identities=26% Similarity=0.480 Sum_probs=201.7
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 111 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 186 (370)
T 3psg_A 111 TSQELSITYGTGS-MTGILGYDTVQVGG---ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWD 186 (370)
T ss_dssp EEEEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEeCCce-EEEEEEEEEEeeCC---cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHH
Confidence 3689999999998 79999999999998 57889999999988764 33557899999999875 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccc
Q 012841 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSG 171 (455)
+|+|+ ++||+||.+.+..+|.|+|||+|+++ .+.+.|++.....+|.|.+++|.||++.+.. ..+..++||||
T Consensus 187 qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDTG 261 (370)
T 3psg_A 187 QGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIAC-----SGGCQAIVDTG 261 (370)
T ss_dssp TTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEEC-----TTCEEEEECTT
T ss_pred CCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEec-----CCCceEEEcCC
Confidence 99998 89999999865568999999999987 5566676666778999999999999987652 24568999999
Q ss_pred cceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecc
Q 012841 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (455)
Q Consensus 172 Ts~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~ 251 (455)
|+++++|++++++|.++|.+.. .....|..+|. .. ..+|+|+|+| +|+++.|++++|+.+.
T Consensus 262 Ts~~~lP~~~~~~i~~~i~a~~-------~~~g~~~v~C~--------~~-~~lP~i~f~~-~g~~~~l~~~~yi~~~-- 322 (370)
T 3psg_A 262 TSLLTGPTSAIANIQSDIGASE-------NSDGEMVISCS--------SI-DSLPDIVFTI-DGVQYPLSPSAYILQD-- 322 (370)
T ss_dssp CCSEEEEHHHHHHHHHHTTCEE-------CTTCCEECCGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEC--
T ss_pred CCcEECCHHHHHHHHHHhCCcc-------cCCCcEEEECC--------Cc-ccCCcEEEEE-CCEEEEECHHHhcccC--
Confidence 9999999999999999985432 12223555664 22 4799999999 8999999999999982
Q ss_pred cCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 252 VSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 252 ~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
...|+..+... ++.||||++|||++|+|||++++|||||++.
T Consensus 323 --~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 --DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp --SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 34699877652 3369999999999999999999999999873
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8.8e-41 Score=334.97 Aligned_cols=244 Identities=24% Similarity=0.412 Sum_probs=202.1
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.+.|++|+ ++|.+++|+|++++ +++.++.|||++.+.+. +.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 144 (323)
T 3cms_A 69 LGKPLSIHYGTGS-MQGILGYDTVTVSN---IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMN 144 (323)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHH
T ss_pred CCcEEEEEeCCCC-eEEEEEEEEEEECC---eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHH
Confidence 3689999999987 79999999999998 57789999999987653 22356899999999765 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccc
Q 012841 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSG 171 (455)
+|+|. ++||+||++.+. .|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+..+ .+..++||||
T Consensus 145 q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~-----~~~~aiiDSG 218 (323)
T 3cms_A 145 RHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACE-----GGCQAILDTG 218 (323)
T ss_dssp TTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEST-----TCEEEEECTT
T ss_pred CCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecC-----CCcEEEEecC
Confidence 99997 899999987543 3999999999986 45566666666789999999999999987532 3458999999
Q ss_pred cceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecc
Q 012841 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (455)
Q Consensus 172 Ts~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~ 251 (455)
|++++||++++++|.+++.+... ....|..+|+. . ..+|+|+|+| +|+++.|++++|+++.
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 279 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDN--------L-SYMPTVVFEI-NGKMYPLTPSAYTSQD-- 279 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTC--------T-TTSCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred CccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCC--------C-ccCceEEEEE-CCEEEEECHHHhccCC--
Confidence 99999999999999999854321 12234556753 2 3799999999 8999999999999982
Q ss_pred cCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 252 VSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 252 ~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 280 --~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 --QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp --TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 56899866553 5789999999999999999999999999863
No 12
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1e-40 Score=333.60 Aligned_cols=244 Identities=24% Similarity=0.434 Sum_probs=204.3
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+. +.....|||||||++.+ +++++|++
T Consensus 66 ~~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 141 (320)
T 4aa9_A 66 LGKPLSIHYGTGS-MEGFLGYDTVTVSN---IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMD 141 (320)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHH
T ss_pred CCcEEEEEECCcE-EEEEEEEEEEEECC---EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHh
Confidence 3689999999998 69999999999998 57889999999988763 33456899999999754 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccc
Q 012841 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSG 171 (455)
+|+|+ ++||+||++. ...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+..+ .+..++||||
T Consensus 142 ~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~iiDsG 215 (320)
T 4aa9_A 142 RHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACV-----GGCQAILDTG 215 (320)
T ss_dssp TTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEEST-----TCEEEEECTT
T ss_pred CCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccC-----CCcEEEEECC
Confidence 99997 8999999985 468999999999987 45666666667789999999999999987632 3458999999
Q ss_pred cceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecc
Q 012841 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (455)
Q Consensus 172 Ts~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~ 251 (455)
|++++||++++++|.+++.+... ....|..+|.. . ..+|+|+|+| +|+++.|++++|+.+.
T Consensus 216 tt~~~lP~~~~~~i~~~~~~~~~-------~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~-- 276 (320)
T 4aa9_A 216 TSVLFGPSSDILKIQMAIGATEN-------RYGEFDVNCGN--------L-RSMPTVVFEI-NGRDYPLSPSAYTSKD-- 276 (320)
T ss_dssp CSSEEEEHHHHHHHHHHTTCEEC-------TTSCEEECGGG--------G-GGCCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred CCcEECCHHHHHHHHHHhCCccc-------CCCcEEEeCCC--------C-CcCceEEEEE-CCEEEEECHHHhccCC--
Confidence 99999999999999999854321 22345566743 2 4799999999 8999999999999763
Q ss_pred cCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 252 VSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 252 ~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 277 --~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 --QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp --TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 56899766543 5679999999999999999999999999864
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=5.1e-40 Score=330.14 Aligned_cols=244 Identities=21% Similarity=0.407 Sum_probs=201.3
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccC-CCCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-DLYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~-~~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.+.|++| +++|.+++|+|+|++ +++.++.|||++.+.+ .+.....|||||||++.+ +++++|++
T Consensus 68 ~~~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 143 (329)
T 1dpj_A 68 NGTEFAIQYGTG-SLEGYISQDTLSIGD---LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQ 143 (329)
T ss_dssp EEEEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCc-eEEEEEEEEEEEECC---eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHh
Confidence 469999999999 579999999999997 5788999999998765 233456899999999876 46899999
Q ss_pred cCCCC-CceEEeecCCC---CCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 94 KGVIS-DSFSLCYGGMD---VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~---~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
+|+|+ ++||+||.+.. ..+|.|+|||+|+++ .+.+.|++.....+|.|.+++|.|+++.+.. .+..++|
T Consensus 144 qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 217 (329)
T 1dpj_A 144 QDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAEL------ESHGAAI 217 (329)
T ss_dssp TTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEC------SSCEEEE
T ss_pred cCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecC------CCccEEe
Confidence 99997 89999998642 247999999999986 4566666666678999999999999997753 3458999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||++++||++++++|.+++.+.. .....|..+|.. . ..+|+|+|+| +|.++.|++++|+++
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~-------~~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 218 DTGTSLITLPSGLAEMINAEIGAKK-------GWTGQYTLDCNT--------R-DNLPDLIFNF-NGYNFTIGPYDYTLE 280 (329)
T ss_dssp CTTCSCEEECHHHHHHHHHHHTCEE-------CTTSSEEECGGG--------G-GGCCCEEEEE-TTEEEEECTTTSEEE
T ss_pred eCCCCcEECCHHHHHHHHHHhCCcc-------CCCCeEEEECCC--------C-CcCCcEEEEE-CCEEEEECHHHhEec
Confidence 9999999999999999999985431 122344455642 2 4799999999 789999999999998
Q ss_pred ecccCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 249 HMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
.. ..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 281 VS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 63 5899766532 4689999999999999999999999999864
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.9e-40 Score=337.32 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=205.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccC-----C-CCCCCCceEEeeCCCCC----------
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-----D-LYTQRADGIMGLGRGRL---------- 85 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~-----~-~~~~~~dGILGLG~~~~---------- 85 (455)
.|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+++ . +.....|||||||++.+
T Consensus 75 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 150 (361)
T 1mpp_A 75 DYNLNITYGTGG-ANGIYFRDSITVGG---ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDT 150 (361)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCC
T ss_pred CCeEEEEECCce-EEEEEEEEEEEECC---EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccccccc
Confidence 589999999998 79999999999998 5788999999998876 3 33567899999999743
Q ss_pred --ChHHHHHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCC----ceEEEeeeeEEcCEEeeeCC
Q 012841 86 --SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSP----YYNIELKELRVAGKPLKVSP 157 (455)
Q Consensus 86 --S~~~qL~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~----~w~V~l~~I~Vgg~~l~l~~ 157 (455)
+++++|+++|+|. ++||+||++. ...|.|+|||+|+++ .+.+.|++..... +|.|.+++|.|+++.+..+
T Consensus 151 ~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~- 228 (361)
T 1mpp_A 151 YNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSF- 228 (361)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEE-
T ss_pred CCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccC-
Confidence 5788999999998 8999999975 457999999999876 3445554444344 8999999999999877432
Q ss_pred ccccCCCcEE-EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCC-CeEEEEEc-C
Q 012841 158 RIFDGGHGTV-LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTF-PQVDMVFG-N 234 (455)
Q Consensus 158 ~~f~~~~~ai-iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l-P~i~f~f~-~ 234 (455)
....++ |||||++++||++++++|.+++.+... .....|..+|+. . ..+ |+|+|+|. +
T Consensus 229 ----~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~--------~-~~~~p~i~f~f~~g 289 (361)
T 1mpp_A 229 ----DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT------ESQQGYTVPCSK--------Y-QDSKTTFSLVLQKS 289 (361)
T ss_dssp ----EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE------EETTEEEEEHHH--------H-TTCCCEEEEEEECT
T ss_pred ----CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc------CCCCcEEEECCC--------c-ccCCCcEEEEEEcC
Confidence 235899 999999999999999999999965432 112235567753 2 366 99999993 3
Q ss_pred -----CeEEEeCCCCceEEecccCCeEEEEEEEc-CCCCeeecceeeeeEEEEEECCCCEEEEeecCCCcc
Q 012841 235 -----GQKLTLSPENYLFRHMKVSGAYCLGIFQN-SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (455)
Q Consensus 235 -----g~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~-~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~ 299 (455)
|.+|.|++++|+++... ++..|+..+.. .++.||||++|||++|+|||++++|||||+++|...
T Consensus 290 ~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 290 GSSSDTIDVSVPISKMLLPVDK-SGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp TCSSCEEEEEEEGGGGEEECSS-SSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred CcCCCCeEEEECHHHhEEecCC-CCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 89999999999998643 35689966655 467899999999999999999999999999999864
No 15
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.7e-40 Score=334.74 Aligned_cols=247 Identities=24% Similarity=0.417 Sum_probs=205.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|.+.|++|+ ++|.+++|+|+|++ +++ ++.|||++..++. +.....|||||||++.+ +++++|++
T Consensus 75 ~~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 149 (341)
T 3k1w_A 75 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 149 (341)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCCEEEEEECCcE-EEEEEEEEEEEECC---cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHH
Confidence 4789999999987 79999999999998 466 9999999988764 44556899999999876 48999999
Q ss_pred cCCCC-CceEEeecCCC----CCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEE
Q 012841 94 KGVIS-DSFSLCYGGMD----VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~----~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (455)
+|+|. ++||+||++.. ...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.. ..+..++
T Consensus 150 qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~-----~~~~~~i 224 (341)
T 3k1w_A 150 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLC-----EDGCLAL 224 (341)
T ss_dssp HTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEEC-----TTCEEEE
T ss_pred CCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeec-----CCCCEEE
Confidence 99998 89999999854 347999999999987 4566676666788999999999999997543 2345899
Q ss_pred EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 012841 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (455)
Q Consensus 168 iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~ 247 (455)
|||||++++||++++++|.+++.+... ... |..+|.. . ..+|+|+|+| +|+++.|++++|+.
T Consensus 225 iDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g-~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~~~~ 286 (341)
T 3k1w_A 225 VDTGASYISGSTSSIEKLMEALGAKKR-------LFD-YVVKCNE--------G-PTLPDISFHL-GGKEYTLTSADYVF 286 (341)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-------SSC-EEEEGGG--------G-GGCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EECCCChhcCCHHHHHHHHHHcCCeec-------CCC-eEEeCCC--------C-CcCCcEEEEE-CCEEEEECHHHhee
Confidence 999999999999999999999854421 112 5566642 2 4789999999 79999999999998
Q ss_pred EecccCCeEEEEEEEc-----C-CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 248 RHMKVSGAYCLGIFQN-----S-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 248 ~~~~~~~~~Cl~~~~~-----~-~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+....++..|+..+.. . .+.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 287 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 7654346799976665 2 5689999999999999999999999999975
No 16
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-40 Score=330.65 Aligned_cols=243 Identities=24% Similarity=0.427 Sum_probs=201.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCC-CCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDL-YTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~-~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|++.|++|+. +|.+++|+|++++ +++.++.|||+..+++.. .....|||||||++.+ +++++|++
T Consensus 67 ~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (324)
T 1am5_A 67 TGKTVDLTYGTGGM-RGILGQDTVSVGG---GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGS 142 (324)
T ss_dssp EEEEEEEECSSCEE-EEEEEEEEEESSS---SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCCCe-EEEEEECceeECC---cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHh
Confidence 36899999999975 9999999999998 477899999999887643 3457899999999865 58999999
Q ss_pred cCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccc
Q 012841 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSG 171 (455)
+|+|. ++||+||++.+...|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.. .+ ..++||||
T Consensus 143 qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiDSG 216 (324)
T 1am5_A 143 QSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAAC-----EG-CQAIVDTG 216 (324)
T ss_dssp TTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCC-----CC-EEEEECTT
T ss_pred cCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeec-----cC-ceEEEecC
Confidence 99997 89999999865568999999999886 3445554444568999999999999987532 12 58999999
Q ss_pred cceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecc
Q 012841 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (455)
Q Consensus 172 Ts~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~ 251 (455)
|++++||++++++|.+++.+. . ....|..+|+. . ..+|+|+|+| +|.++.|++++|+++.
T Consensus 217 Tt~~~lp~~~~~~l~~~~~~~-~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 276 (324)
T 1am5_A 217 TSKIVAPVSALANIMKDIGAS-E-------NQGEMMGNCAS--------V-QSLPDITFTI-NGVKQPLPPSAYIEGD-- 276 (324)
T ss_dssp CSSEEECTTTHHHHHHHHTCE-E-------CCCCEECCTTS--------S-SSSCCEEEEE-TTEEEEECHHHHEEES--
T ss_pred CccEECCHHHHHHHHHHhCCc-c-------cCCcEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccC--
Confidence 999999999999999998643 1 12245567753 1 4799999999 8999999999999886
Q ss_pred cCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 252 VSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 252 ~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 277 --~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 --QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp --SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred --CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 56899766542 4579999999999999999999999999863
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=7e-40 Score=328.83 Aligned_cols=243 Identities=22% Similarity=0.411 Sum_probs=199.9
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCCC-------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL-------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~~-------S~~~qL~~ 93 (455)
..|.|.+.|++|+.++|.+++|+|++++ +++.++.|||++.+++.+.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 69 DGRTWSISYGDGSSASGILAKDNVNLGG---LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECC---EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 3589999999999889999999999998 4778999999998776555556899999999765 48999999
Q ss_pred cCCCC-CceEEeecCC-CCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEc
Q 012841 94 KGVIS-DSFSLCYGGM-DVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~-~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiD 169 (455)
+|+|. ++||+||++. ....|.|+|||+|+++ .+.+.|.+.. ...+|.|.+++|.||++ +. ..+..++||
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~------~~~~~~iiD 218 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV------ASSFDGILD 218 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE------ECCEEEEEC
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec------CCCceEEEe
Confidence 99997 8999999653 3467999999999886 3444454443 46799999999999993 32 234589999
Q ss_pred cccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 012841 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (455)
Q Consensus 170 SGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~ 249 (455)
|||++++||+++|+++++++.+.+. +. ..|..+|+. ..+|+|+|+| +|.++.|++++|++..
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~------~~-g~~~~~C~~----------~~~p~i~f~f-~g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDN------GD-GTYTISCDT----------SAFKPLVFSI-NGASFQVSPDSLVFEE 280 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEEC------SS-SCEEECSCG----------GGCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred cCCccEECCHHHHHHHHHHHhcccC------CC-CeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHEEEcC
Confidence 9999999999999999999966543 11 245556742 2589999999 5669999999999875
Q ss_pred cccCCeEEEEEEEcC-CCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 250 MKVSGAYCLGIFQNS-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 250 ~~~~~~~Cl~~~~~~-~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
. +..|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 281 ~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 281 F---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp E---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred C---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 3 56899977654 678999999999999999999999999986
No 18
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3e-40 Score=332.23 Aligned_cols=245 Identities=17% Similarity=0.288 Sum_probs=201.2
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEeeCCCCCC-------hHHHHHhc
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRLS-------VVDQLVEK 94 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGLG~~~~S-------~~~qL~~~ 94 (455)
.|.|++.|++|+. +|.+++|+|++++ +++.++.|||++.+...+.....|||||||++.++ ++++|+++
T Consensus 72 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~---~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 147 (330)
T 1yg9_A 72 GNVQVKFFDTGSA-VGRGIEDSLTISQ---LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEE 147 (330)
T ss_dssp EEEEEEETTTEEE-EEEEEEEEEEETT---EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHT
T ss_pred CCEEEEEECCceE-EEEEEEEEEEECC---EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhc
Confidence 4789999999975 9999999999998 57889999999988433334568999999998765 89999999
Q ss_pred CCCCCceEEeecCCCCC--CceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccc
Q 012841 95 GVISDSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (455)
Q Consensus 95 g~I~~~FSl~L~~~~~~--~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSG 171 (455)
|+|+++||+||++.... .|.|+|||+|+++ .+.+.|++.....+|.|.+++|.|+++.+. ..+..++||||
T Consensus 148 g~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSG 221 (330)
T 1yg9_A 148 NLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTS 221 (330)
T ss_dssp TSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE------CTTCEEEECTT
T ss_pred CCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc------CCCcEEEEecC
Confidence 98888899999975322 7999999999987 455666655577899999999999998764 13468999999
Q ss_pred cceeeecHHHHHHHHHHHHHhccccccccCCCCCc-ccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEec
Q 012841 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNY-DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (455)
Q Consensus 172 Ts~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~ 250 (455)
|++++||++++++|.+++.+... ..+ ...| ..+|+ .. ..+|+|+|+| +|.++.|++++|+++.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~~----~~g-~~~~~~~~C~--------~~-~~~p~i~f~f-gg~~~~l~~~~y~~~~- 285 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVVE----KTT-TRRICKLDCS--------KI-PSLPDVTFVI-NGRNFNISSQYYIQQN- 285 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEEE----ECS-SCEEEEECGG--------GG-GGSCCEEEEE-TTEEEEECHHHHEEEE-
T ss_pred CccccCCHHHHHHHHHHhCCccc----CCC-ceEEEEEECC--------Cc-cccCcEEEEE-CCEEEEECHHHhcccC-
Confidence 99999999999999999854321 011 0133 44563 22 3789999999 8999999999999986
Q ss_pred ccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 251 KVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 251 ~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 286 ---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 ---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 46899776642 5789999999999999999999999999863
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.8e-40 Score=337.23 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=201.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEe----ccCCCCCCCCceEEeeCCCCC------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~----~s~~~~~~~~dGILGLG~~~~------S~~~q 90 (455)
..|.|.+.|++|+ ++|.+++|+|+|++ +++.+ .|||++. ++ .+.....|||||||++.+ +++++
T Consensus 117 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~ 190 (375)
T 1miq_A 117 DGTKVDITYGSGT-VKGFFSKDLVTLGH---LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVE 190 (375)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHH
T ss_pred CCcEEEEEeCCCe-EEEEEEEEEEEEcC---ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHH
Confidence 3689999999988 79999999999998 47778 9999998 54 333456899999999876 58999
Q ss_pred HHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 91 L~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
|+++|+|. ++||+||++.+..+|.|+|||+|+++ .+.+.|++.....+|.|.++ |.||++.+ ....++|
T Consensus 191 l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~--------~~~~aii 261 (375)
T 1miq_A 191 LKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM--------EKANVIV 261 (375)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE--------EEEEEEE
T ss_pred HHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc--------ccceEEe
Confidence 99999997 89999999865568999999999886 45566666666789999999 99999876 1348999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||++++||++++++|.+++.+... .....|..+|+. ..+|+|+|+| +|.+|.|+|++|+++
T Consensus 262 DSGTs~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~yi~~ 324 (375)
T 1miq_A 262 DSGTTTITAPSEFLNKFFANLNVIKV------PFLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYYMNP 324 (375)
T ss_dssp CTTBSSEEECHHHHHHHHHHHTCEEC------TTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGSEEE
T ss_pred cCCCccEEcCHHHHHHHHHHhCCccc------CCCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHhEee
Confidence 99999999999999999999865321 123345667753 3799999999 899999999999998
Q ss_pred ecccCCeEEEEEEEcCC---CCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 249 HMKVSGAYCLGIFQNSD---STTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~~---~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
....+...|+..+...+ +.||||++|||++|+|||++++|||||++
T Consensus 325 ~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~ 373 (375)
T 1miq_A 325 ILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIA 373 (375)
T ss_dssp SSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEc
Confidence 75323468997666543 78999999999999999999999999987
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.8e-40 Score=330.31 Aligned_cols=246 Identities=24% Similarity=0.447 Sum_probs=202.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCC-CCCCCceEEeeCCCCC------ChHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDL-YTQRADGIMGLGRGRL------SVVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~-~~~~~dGILGLG~~~~------S~~~qL~~ 93 (455)
..|.|++.|++|+. +|.+++|+|++++ +++.++.|||+..+++.. .....|||||||++.+ +++++|++
T Consensus 67 ~~~~~~i~Yg~gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 67 NGQTFSLQYGSGSL-TGFFGYDTLTVQS---IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEEETT---EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred CCcEEEEEeCCCCe-EEEEEeeeEEEcc---eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 36899999999875 9999999999997 578899999999876643 3457899999999876 48999999
Q ss_pred cCCCC-CceEEeecCCCCC-CceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEcc
Q 012841 94 KGVIS-DSFSLCYGGMDVG-GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~~~-~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDS 170 (455)
+|+|. ++||+||++.+.. +|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.. ......++|||
T Consensus 143 qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDS 218 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDT 218 (329)
T ss_dssp TTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCT----TTTCEEEEECT
T ss_pred cCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeee----cCCCceEEEec
Confidence 99997 8999999986433 7999999999986 4556666556678999999999999987642 12346899999
Q ss_pred ccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEec
Q 012841 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (455)
Q Consensus 171 GTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~ 250 (455)
||++++||++++++|.+++.+... ....|..+|+. . ..+|+|+|+| +|.++.|++++|+++..
T Consensus 219 GTt~~~lp~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 219 GTSLLTVPQQYMSALLQATGAQED-------EYGQFLVNCNS--------I-QNLPSLTFII-NGVEFPLPPSSYILSNN 281 (329)
T ss_dssp TCCSEEEEGGGHHHHHHHHTCEEC-------TTSCEEECGGG--------G-GGSCCEEEEE-TTEEEEECHHHHEEECS
T ss_pred CCccEECCHHHHHHHHHHhCCeec-------CCCeEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccCC
Confidence 999999999999999999854321 12345566753 2 3799999999 89999999999998864
Q ss_pred ccCCeEEEEEEEcC------CC-CeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 251 KVSGAYCLGIFQNS------DS-TTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 251 ~~~~~~Cl~~~~~~------~~-~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
+ .|+..+... ++ .||||++|||++|+|||++++|||||+++
T Consensus 282 ---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 ---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3 899766532 34 79999999999999999999999999863
No 21
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.4e-40 Score=330.15 Aligned_cols=243 Identities=15% Similarity=0.244 Sum_probs=196.2
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCC-CCCCceEEeeCCCCC---------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~-~~~~dGILGLG~~~~---------S~~~q 90 (455)
..|.|++.|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+. ....|||||||++.+ +++++
T Consensus 71 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 71 SGASWSISYGDGSSSSGDVYTDKVTIGG---FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp TTCBEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCcEEEEEEEEEEEECC---EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 4789999999999889999999999998 5788999999998766443 246899999999754 48899
Q ss_pred HHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEE
Q 012841 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (455)
Q Consensus 91 L~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (455)
|+++ |. ++||+||.+ ..+|.|+|||+|+++ .+.+.|.+.. ...+|.|.+++|.|+++.+. .....++
T Consensus 148 l~~~--i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~------~~~~~ai 217 (329)
T 3c9x_A 148 AASS--LAEPLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN------RNSIDGI 217 (329)
T ss_dssp HHTT--SSSSEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC------SCCEEEE
T ss_pred HHHh--cCCCEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc------CCCceEE
Confidence 9886 65 899999986 357999999999876 4455555443 46799999999999998653 1345899
Q ss_pred EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 012841 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (455)
Q Consensus 168 iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~ 247 (455)
|||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a~~-----~~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~ 280 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSAQY-----DNQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNL 280 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEE
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 999999999999999999987732211 111223445674 3789999999 79999999999998
Q ss_pred EecccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEee
Q 012841 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWK 293 (455)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~ 293 (455)
.....+...|++.+... .+.||||++|||++|+|||++++|||||+
T Consensus 281 ~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 281 TPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp EESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred eccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEec
Confidence 76432347999976654 57899999999999999999999999997
No 22
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.6e-40 Score=330.69 Aligned_cols=244 Identities=18% Similarity=0.295 Sum_probs=196.4
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGILGLG~~~~---------S~~~q 90 (455)
+.|.|.+.|++|+.++|.+++|+|++++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 70 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 146 (329)
T 1oew_A 70 SGATWSISYGDGSSSSGDVYTDTVSVGG---LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDN 146 (329)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCcEEEEEEEEEEEECC---EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHH
Confidence 3689999999999889999999999998 57889999999987664432 46899999999754 48899
Q ss_pred HHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEE
Q 012841 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (455)
Q Consensus 91 L~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (455)
|+++ |. ++||+||.+ ...|.|+|||+|+++ .+.+.|.+.. ...+|.|.+++|.|+++.+.. ....++
T Consensus 147 l~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~------~~~~ai 216 (329)
T 1oew_A 147 AKAS--LDSPVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKS------TSIDGI 216 (329)
T ss_dssp HTTT--SSSSEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEE------EEEEEE
T ss_pred HHHh--ccCcEEEEEccC--CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccC------CCceEE
Confidence 9886 65 899999986 357999999999987 3444554443 467999999999999986641 234899
Q ss_pred EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 012841 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (455)
Q Consensus 168 iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~ 247 (455)
|||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 217 iDSGTt~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~ 279 (329)
T 1oew_A 217 ADTGTTLLYLPATVVSAYWAQVSGAKS-----SSSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDF 279 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred EeCCCCCEECCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeee
Confidence 999999999999999999987732211 112223455674 3789999999 89999999999998
Q ss_pred EecccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEEC-CCCEEEEeec
Q 012841 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDR-GNDKVGFWKT 294 (455)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~-en~rIGFa~s 294 (455)
.....+...|++.+... .+.||||++|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 76432357899977654 57899999999999999999 9999999973
No 23
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.1e-39 Score=339.62 Aligned_cols=299 Identities=21% Similarity=0.327 Sum_probs=224.8
Q ss_pred CccccccCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCC-C
Q 012841 3 NTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-T 71 (455)
Q Consensus 3 sT~~~v~C~~~C~C~~----------~~~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~-~ 71 (455)
|+.-+|.|..-|.|.. ....|.|.+.|++|+. +|.+++|+|+|++... ...++.|+|+....+.+. .
T Consensus 97 Ss~lWV~~~~cc~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~-~~~~~~~~~~~~~~~~~~~~ 174 (455)
T 3lpj_A 97 SSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW-EGELGTDLVSIPHGPN-VTVRANIAAITESDKFFING 174 (455)
T ss_dssp CCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE-EEEEEEEEEECTTSCS-CEEEEEEEEEEEEESCSCTT
T ss_pred CcceEEecccccccCCcccCCCCCCcccCCccEEEEeCCeEE-EEEEEEEEEEECCCcc-eeeEEEEEEEEccCcccccC
Confidence 4455677775443322 1237899999999985 9999999999986421 222467899887766554 3
Q ss_pred CCCceEEeeCCCCC--------ChHHHHHhcCCCCCceEEeecCC----------CCCCceEEECCCCCCC-CceeeecC
Q 012841 72 QRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSD 132 (455)
Q Consensus 72 ~~~dGILGLG~~~~--------S~~~qL~~~g~I~~~FSl~L~~~----------~~~~G~I~fGg~d~s~-~~~~~~~~ 132 (455)
..+|||||||++.+ +++++|+++++|+++||+||++. ....|.|+|||+|+++ .+.+.|.+
T Consensus 175 ~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p 254 (455)
T 3lpj_A 175 SNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTP 254 (455)
T ss_dssp CCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEE
T ss_pred CCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEe
Confidence 57899999999754 68999999999998999999753 2457999999999987 45566666
Q ss_pred CCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhccccccccCC-CCCcccccc
Q 012841 133 PFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGP-DPNYDDICF 211 (455)
Q Consensus 133 ~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~-~~~~~~~C~ 211 (455)
.....+|.|.+++|.|+++.+.++...+. ...++|||||++++||++++++|.++|.+.... ...... ...+...|+
T Consensus 255 ~~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~g~~~~C~ 332 (455)
T 3lpj_A 255 IRREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCW 332 (455)
T ss_dssp CCSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHTTCSCEEE
T ss_pred cCCCceeEEEEeEEEECCEEccccccccC-CCeEEEECCCcceeCCHHHHHHHHHHhhhhccc-cccCcccccCcceecc
Confidence 66678999999999999999887654442 458999999999999999999999999887531 111000 012357787
Q ss_pred cCCcCCcccccCCCCeEEEEEcCCe-----EEEeCCCCceEEecccC--CeEEEEE-EEcCCCCeeecceeeeeEEEEEE
Q 012841 212 SGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLGI-FQNSDSTTLLGGIVVRNTLVTYD 283 (455)
Q Consensus 212 ~~~~~~~~~~~~~lP~i~f~f~~g~-----~i~l~p~~Yi~~~~~~~--~~~Cl~~-~~~~~~~~ILG~~Flr~~yvVFD 283 (455)
...... +..+|+|+|+|+++. +|.|+|++|+.+..... ...|+++ +...++.||||++|||++|+|||
T Consensus 333 ~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD 408 (455)
T 3lpj_A 333 QAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFD 408 (455)
T ss_dssp STTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEE
T ss_pred cccCCc----hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEE
Confidence 643221 246999999995543 69999999999876422 2589973 22236789999999999999999
Q ss_pred CCCCEEEEeecCCCccc-ccccCCCCC
Q 012841 284 RGNDKVGFWKTNCSELW-RRLQLPSVP 309 (455)
Q Consensus 284 ~en~rIGFa~s~C~~~~-~~~~~~~~~ 309 (455)
++++|||||+++|...+ ..+..++.|
T Consensus 409 ~~~~rIGfA~~~c~~~~~~~i~~i~g~ 435 (455)
T 3lpj_A 409 RARKRIGFAVSACHVHDEFRTAAVEGP 435 (455)
T ss_dssp TTTTEEEEEEETTCCCCSSCCCEEEEE
T ss_pred CCCCEEEEEecccccccccCcceecCC
Confidence 99999999999998765 345555444
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.8e-39 Score=341.93 Aligned_cols=264 Identities=23% Similarity=0.396 Sum_probs=205.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCCC------hHHHHHh
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS------VVDQLVE 93 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~S------~~~qL~~ 93 (455)
..|+|++.|++|+ ++|.+++|+|+|++ +++.++.|||+..+.+. +....+|||||||++.++ ++++|++
T Consensus 108 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~ 183 (478)
T 1qdm_A 108 NGKPAAIQYGTGS-IAGYFSEDSVTVGD---LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIE 183 (478)
T ss_dssp CCCEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTT
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEECC---eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHH
Confidence 5799999999987 79999999999998 47789999999987653 334568999999998764 6899999
Q ss_pred cCCCC-CceEEeecCCC--CCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEc
Q 012841 94 KGVIS-DSFSLCYGGMD--VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (455)
Q Consensus 94 ~g~I~-~~FSl~L~~~~--~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiD 169 (455)
+|+|+ ++||+||.+.. ..+|.|+|||+|+++ .+.++|++.....+|.|.+++|.||++.+.+.. .+..++||
T Consensus 184 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~----~~~~aiiD 259 (478)
T 1qdm_A 184 QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCA----GGCAAIAD 259 (478)
T ss_dssp TTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTT----TCEEEEEC
T ss_pred CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecC----CCceEEEc
Confidence 99998 89999998752 357999999999987 455666555567899999999999999876432 35689999
Q ss_pred cccceeeecHHHHHHHHHHHHHhc----------------------ccc-----------ccccCC--------------
Q 012841 170 SGTTYAYLPGHAFAAFKDALIKET----------------------HVL-----------KRIRGP-------------- 202 (455)
Q Consensus 170 SGTs~i~LP~~~~~~l~~ai~~~~----------------------~~~-----------~~~~~~-------------- 202 (455)
|||+++++|+++|++|.++|.+.. ... ....+.
T Consensus 260 TGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~ 339 (478)
T 1qdm_A 260 SGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDE 339 (478)
T ss_dssp SSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------------------
T ss_pred CCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccc
Confidence 999999999999999999986431 000 000000
Q ss_pred -----CC-------------------------------CcccccccC------CcCCcccccCCCCeEEEEEcCCeEEEe
Q 012841 203 -----DP-------------------------------NYDDICFSG------AGRDVSELSKTFPQVDMVFGNGQKLTL 240 (455)
Q Consensus 203 -----~~-------------------------------~~~~~C~~~------~~~~~~~~~~~lP~i~f~f~~g~~i~l 240 (455)
.. .....|+.. +..+|+.. ..+|+|+|+| +|++|.|
T Consensus 340 ~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg~~~~l 417 (478)
T 1qdm_A 340 PVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GGKKFAL 417 (478)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TTEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CCEEEEE
Confidence 00 001345432 23567554 4899999999 8999999
Q ss_pred CCCCceEEecccCCeEEEEEEEcC------CCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 241 SPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 241 ~p~~Yi~~~~~~~~~~Cl~~~~~~------~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
+|++|+++........|++.+... ++.||||+.|||++|+|||++|+|||||++
T Consensus 418 ~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 418 KPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 999999987543346899866532 467999999999999999999999999986
No 25
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.8e-39 Score=330.41 Aligned_cols=289 Identities=21% Similarity=0.326 Sum_probs=216.4
Q ss_pred CccccccCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCCCccccc-ceEEEEEEeccCCCC-
Q 012841 3 NTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY- 70 (455)
Q Consensus 3 sT~~~v~C~~~C~C~~----------~~~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~-~~~fG~~~~~s~~~~- 70 (455)
|+.-+|.|..-|.|.. ....|.|.+.|++|+ ++|.+++|+|+|++.. ... .+.|+++....+.+.
T Consensus 51 Ss~lWv~~~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--~~~~~~~~~~~~~~~~~~~~ 127 (402)
T 3vf3_A 51 SSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGK-WEGELGTDLVSIPHGP--NVTVRANIAAITESDKFFIN 127 (402)
T ss_dssp CCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCE-EEEEEEEEEEECTTSC--SCEEEEEEEEEEEEESCSCT
T ss_pred CCceEEccCCCCcccCCcCcccCcccccCCCEEEEEECcEE-EEEEEEEEEEEECCcc--ccceeeeEEEEEcccccccc
Confidence 4455677765443322 123789999999998 5999999999998532 222 355888877666543
Q ss_pred CCCCceEEeeCCCCC--------ChHHHHHhcCCCCCceEEeecCC----------CCCCceEEECCCCCCC-Cceeeec
Q 012841 71 TQRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHS 131 (455)
Q Consensus 71 ~~~~dGILGLG~~~~--------S~~~qL~~~g~I~~~FSl~L~~~----------~~~~G~I~fGg~d~s~-~~~~~~~ 131 (455)
....|||||||++.+ +++++|+++++|+++||+||++. ....|.|+|||+|+++ .+.+.|.
T Consensus 128 ~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~ 207 (402)
T 3vf3_A 128 GSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYT 207 (402)
T ss_dssp TCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEE
T ss_pred CCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEE
Confidence 356899999999754 68999999999998999999752 2457999999999987 4556666
Q ss_pred CCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhccccccccCCC-CCccccc
Q 012841 132 DPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPD-PNYDDIC 210 (455)
Q Consensus 132 ~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~-~~~~~~C 210 (455)
+.....+|.|.+++|.|+++.+.++...+. ...++|||||++++||++++++|.++|.+.... ....... ..+...|
T Consensus 208 p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~C 285 (402)
T 3vf3_A 208 PIRREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVC 285 (402)
T ss_dssp ECSSBTTBEECEEEEEETTEECCCCGGGGG-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGTCSCEE
T ss_pred eCCcCcEEEEEEeEEEECCEEecccccccC-CCeEEEECCCCcccCCHHHHHHHHHHHhhhccc-cccCccccccccccc
Confidence 666678999999999999999887654442 458999999999999999999999999887531 1111100 1235678
Q ss_pred ccCCcCCcccccCCCCeEEEEEcCCe-----EEEeCCCCceEEecccC--CeEEEE-EEEcCCCCeeecceeeeeEEEEE
Q 012841 211 FSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLG-IFQNSDSTTLLGGIVVRNTLVTY 282 (455)
Q Consensus 211 ~~~~~~~~~~~~~~lP~i~f~f~~g~-----~i~l~p~~Yi~~~~~~~--~~~Cl~-~~~~~~~~~ILG~~Flr~~yvVF 282 (455)
+..... .+..+|+|+|+|+++. ++.|+|++|+.+..... ...|++ .+...++.||||++|||++|+||
T Consensus 286 ~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvf 361 (402)
T 3vf3_A 286 WQAGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVF 361 (402)
T ss_dssp EETTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEE
T ss_pred cccccc----hHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEE
Confidence 754322 1247999999995542 69999999999865421 258996 33333678999999999999999
Q ss_pred ECCCCEEEEeecCCCccc
Q 012841 283 DRGNDKVGFWKTNCSELW 300 (455)
Q Consensus 283 D~en~rIGFa~s~C~~~~ 300 (455)
|++++|||||+++|...+
T Consensus 362 D~~~~rIGfA~~~c~~~~ 379 (402)
T 3vf3_A 362 DRARKRIGFAVSACHVHD 379 (402)
T ss_dssp EGGGTEEEEEEETTCCBC
T ss_pred ECCCCEEEEEecccCccc
Confidence 999999999999999754
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=330.33 Aligned_cols=270 Identities=23% Similarity=0.396 Sum_probs=206.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCC-CCCCceEEeeCCCCC--------ChHHHHH
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQLV 92 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~-~~~~dGILGLG~~~~--------S~~~qL~ 92 (455)
.|.|++.|++|+ ++|.+++|+|+|++.. ....++.|+++....+.+. ....|||||||++.+ +++++|+
T Consensus 65 ~~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 65 GFDVTVKYTQGS-WTGFVGEDLVTIPKGF-NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETTTE-EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred CceEEEEECCcE-EEEEEEEEEEEECCCc-cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 689999999997 5999999999998742 1222467888876655443 346799999999764 4889999
Q ss_pred hcCCCCCceEEeecCC-------CCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCC
Q 012841 93 EKGVISDSFSLCYGGM-------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGH 164 (455)
Q Consensus 93 ~~g~I~~~FSl~L~~~-------~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~ 164 (455)
+|+.|+++||+||+.. ...+|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.||++.+.++...|. ..
T Consensus 143 ~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~ 221 (383)
T 2ewy_A 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYN-AD 221 (383)
T ss_dssp HHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTT-SS
T ss_pred HccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccC-Cc
Confidence 9998888999999741 2457999999999886 4556666666678999999999999998877654442 35
Q ss_pred cEEEccccceeeecHHHHHHHHHHHHHhcccccccc-CCCCCcccccccCCcCCcccccCCCCeEEEEEcCC-----eEE
Q 012841 165 GTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG-----QKL 238 (455)
Q Consensus 165 ~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g-----~~i 238 (455)
.++|||||++++||+++|++|.++|.+.... .... +....+...|+..... .+..+|+|+|+|+++ .++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAVVEAVARASLI-PEFSDGFWTGSQLACWTNSET----PWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHHHHHHHHTTCS-SCCCHHHHHTSEEEEECSSSC----GGGGSCCEEEEEECSSTTEEEEE
T ss_pred cEEEEcCCccccCCHHHHHHHHHHHhhhccc-ccCccccccccccccccCCcc----cHhhCCcEEEEECCCCCCceEEE
Confidence 8999999999999999999999999876531 0000 0000235688754321 124799999999553 489
Q ss_pred EeCCCCceEEeccc-CCeEEEEE-EEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCcc
Q 012841 239 TLSPENYLFRHMKV-SGAYCLGI-FQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (455)
Q Consensus 239 ~l~p~~Yi~~~~~~-~~~~Cl~~-~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~ 299 (455)
.|+|++|+.+.... .+..|+++ +...++.||||+.|||++|+|||++++|||||+++|...
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred EEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 99999999886421 25689863 333467899999999999999999999999999999853
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.9e-39 Score=329.76 Aligned_cols=269 Identities=22% Similarity=0.352 Sum_probs=206.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCccccc-ceEEEEEEeccCCCC-CCCCceEEeeCCCCC--------ChHHHH
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQL 91 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~-~~~fG~~~~~s~~~~-~~~~dGILGLG~~~~--------S~~~qL 91 (455)
.|.|++.|++|+. +|.+++|+|+|++. .... .+.|+++....+.+. ....|||||||++.+ +++++|
T Consensus 73 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g--~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 73 RKGVYVPYTQGKW-EGELGTDLVSIPHG--PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEEECTTS--CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred CceEEEEECCcEE-EEEEEeEEEEECCC--CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 6999999999985 99999999999842 1222 467888776555443 356899999999754 588999
Q ss_pred HhcCCCCCceEEeecCC----------CCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccc
Q 012841 92 VEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIF 160 (455)
Q Consensus 92 ~~~g~I~~~FSl~L~~~----------~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f 160 (455)
++++.|+++||+||++. ...+|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.++...|
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~ 229 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 229 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcccc
Confidence 99999998999999853 1357999999999886 455666655667899999999999999887765544
Q ss_pred cCCCcEEEccccceeeecHHHHHHHHHHHHHhcccccccc-CCCCCcccccccCCcCCcccccCCCCeEEEEEcCC----
Q 012841 161 DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG---- 235 (455)
Q Consensus 161 ~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g---- 235 (455)
. ...++|||||++++||+++|++|.++|.+..... ... +.-..+...|+..... .+..+|+|+|+|+++
T Consensus 230 ~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~ 303 (395)
T 2qp8_A 230 N-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE-KFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQ 303 (395)
T ss_dssp G-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTS-CCCHHHHTTCSCEEESTTCC----CGGGSCCEEEEEECSSTTE
T ss_pred C-CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccc-cCCccccccccccccccccc----hHhhCCcEEEEEccCCCCc
Confidence 3 3589999999999999999999999998765311 000 0001124678754321 224799999999654
Q ss_pred -eEEEeCCCCceEEeccc--CCeEEEE-EEEcCCCCeeecceeeeeEEEEEECCCCEEEEeecCCCcc
Q 012841 236 -QKLTLSPENYLFRHMKV--SGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (455)
Q Consensus 236 -~~i~l~p~~Yi~~~~~~--~~~~Cl~-~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~C~~~ 299 (455)
.+|.|+|++|+.+.... ....|++ .+...++.||||+.|||++|+|||++++|||||+++|...
T Consensus 304 ~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 304 SFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp EEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred eEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 37999999999886531 2358974 3443467899999999999999999999999999999964
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-39 Score=323.38 Aligned_cols=245 Identities=16% Similarity=0.291 Sum_probs=197.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGILGLG~~~~---------S~~~q 90 (455)
..|.|++.|++|+.++|.+++|+|++++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 66 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 66 SGYSWDISYGDGSSASGDVYRDTVTVGG---VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp TTCBEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCEEEEEeCCCCEEEEEEEEeEEEECC---EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 5799999999999889999999999998 57889999999987664443 46899999999765 37899
Q ss_pred HHhcCCCCCceEEeecCCCCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 91 L~~~g~I~~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
|.++ +-+++||+||.+. ..|.|+|||+|+++ .+.+.|.+.. ...+|.|.+++|.|+++.+. ..+..++|
T Consensus 143 l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~------~~~~~aii 213 (325)
T 1ibq_A 143 VKSQ-LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS------SSGFSAIA 213 (325)
T ss_dssp HGGG-SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB------SCCEEEEE
T ss_pred HHHh-cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc------CCCceEEE
Confidence 9987 3348999999873 57999999999886 4444554443 46799999999999998653 13458999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++.
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~ 276 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQE-----SYEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYINYA 276 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCBC-----CSSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCceE-----cCcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhccc
Confidence 99999999999999999988732211 111223455664 3789999999 899999999999987
Q ss_pred ecccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
....+...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 277 ~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 277 PVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp ESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 6432347999977654 578999999999999999999999999986
No 29
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.9e-39 Score=336.04 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=203.7
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEe----ccCCCCCCCCceEEeeCCCCC------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~----~s~~~~~~~~dGILGLG~~~~------S~~~q 90 (455)
..|.|.+.|++|+ ++|.+++|+|++++ +++. +.|||++. +++ +.....|||||||++.+ +++++
T Consensus 192 ~~~~f~i~YgdGs-~~G~~~~Dtv~igg---~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~ 265 (451)
T 3qvc_A 192 DDTPVKLTSKAGT-ISGIFSKDLVTIGK---LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVE 265 (451)
T ss_dssp EEEEEEEECSSEE-EEEEEEEEEEEETT---EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHH
T ss_pred CCCEEEEEECCCE-EEEEEEEEEEEECC---EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHH
Confidence 4799999999998 89999999999998 4677 99999998 655 44456899999999765 68999
Q ss_pred HHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 91 L~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
|+++|+|+ ++||+||++.+..+|.|+|||+|+++ .+.+.|.+.....+|.|.++ |.||++ . .....++|
T Consensus 266 L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~-~-------~~~~~aii 336 (451)
T 3qvc_A 266 LKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV-S-------SKKANVIL 336 (451)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE-E-------EEEEEEEE
T ss_pred HHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc-c-------CCCceEEE
Confidence 99999998 89999999876668999999999987 45666766667889999999 999998 1 12458999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||+++++|++++++|.+++.+... .....|..+|. ...+|+|+|+| +|.++.|++++|+.+
T Consensus 337 DSGTt~i~lP~~~~~~i~~~i~a~~~------~~~g~y~v~C~----------~~~~P~itf~f-gg~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 337 DSATSVITVPTEFFNQFVESASVFKV------PFLSLYVTTCG----------NTKLPTLEYRS-PNKVYTLEPKQYLEP 399 (451)
T ss_dssp CTTBSSEEECHHHHHHHHTTTTCEEC------TTSSCEEEETT----------CTTCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCccccCCHHHHHHHHHHcCCeec------CCCCeEEeeCC----------cCcCCcEEEEE-CCEEEEEcHHHheee
Confidence 99999999999999999988854321 11234455663 24899999999 899999999999998
Q ss_pred ecccCCeEEEEEEEcC---CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~---~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
....++..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 400 ~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 400 LENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7643457899877765 3679999999999999999999999999873
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-38 Score=321.14 Aligned_cols=266 Identities=18% Similarity=0.275 Sum_probs=205.4
Q ss_pred CccccccCCCCCCCCC--CCCCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCCCCCceEEee
Q 012841 3 NTYQALKCNPDCNCDN--DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGL 80 (455)
Q Consensus 3 sT~~~v~C~~~C~C~~--~~~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~~~~dGILGL 80 (455)
|+.-++.|....++.+ ....|.|.+.|++|+ ++|.+++|+|+|++ +++.++.|||++.+.+ + ...||||||
T Consensus 35 Ss~lWv~~~~~y~~s~Ss~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~---~~v~~~~fg~~~~~~~-~--~~~~GilGL 107 (340)
T 1wkr_A 35 SSNTWLGADKSYVKTSTSSATSDKVSVTYGSGS-FSGTEYTDTVTLGS---LTIPKQSIGVASRDSG-F--DGVDGILGV 107 (340)
T ss_dssp CCCCEECSSSCCCCCTTCEEEEEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEES-C--TTCSEEEEC
T ss_pred ChhheecCCCccCCcCCccccCceEEEEECCcE-EEEEEEEEEEEECC---EEEcceEEEEEEccCC-C--cCCCcEEEC
Confidence 3444577764322221 234799999999997 79999999999998 5788999999998765 3 258999999
Q ss_pred CCCCC--------------ChHHHHHhcCCCC-CceEEeecCC---CCCCceEEECCCCCCC-CceeeecCCCC----CC
Q 012841 81 GRGRL--------------SVVDQLVEKGVIS-DSFSLCYGGM---DVGGGAMVLGGITPPP-DMVFSHSDPFR----SP 137 (455)
Q Consensus 81 G~~~~--------------S~~~qL~~~g~I~-~~FSl~L~~~---~~~~G~I~fGg~d~s~-~~~~~~~~~~~----~~ 137 (455)
|++.+ +++++|+++|+|+ ++||+||.+. ....|.|+|||+|+++ .+.+.|++... ..
T Consensus 108 g~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~ 187 (340)
T 1wkr_A 108 GPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASA 187 (340)
T ss_dssp SCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGG
T ss_pred CccccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcc
Confidence 99654 5799999999998 8999999863 2347999999999876 34455544443 67
Q ss_pred ceEEEeeeeEEcC-EEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcC
Q 012841 138 YYNIELKELRVAG-KPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGR 216 (455)
Q Consensus 138 ~w~V~l~~I~Vgg-~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~ 216 (455)
+|.|. ++|.|++ +.+.. +..++|||||++++||++++++|.+++.++.. .....+..+|.
T Consensus 188 ~w~v~-~~i~v~~~~~l~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g~~~~~C~----- 248 (340)
T 1wkr_A 188 YWGIN-QSIRYGSSTSILS-------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTGLLRLTTA----- 248 (340)
T ss_dssp SSEEE-EEEEETTTEEEEE-------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTSSEEECHH-----
T ss_pred eEEEE-eeEEECCCeEccC-------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCCeEEeecc-----
Confidence 99999 9999998 77642 24799999999999999999999988854432 11223445563
Q ss_pred CcccccCCCCeEEEEEcCCeEEEeCCCCceEEeccc-----CCeEEEEEEEc-C-----CCCeeecceeeeeEEEEEECC
Q 012841 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV-----SGAYCLGIFQN-S-----DSTTLLGGIVVRNTLVTYDRG 285 (455)
Q Consensus 217 ~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~-----~~~~Cl~~~~~-~-----~~~~ILG~~Flr~~yvVFD~e 285 (455)
.. ..+|+|+|+| +|.++.|+|++|+++.... ....|+..+.. . +..||||++|||++|+|||++
T Consensus 249 ---~~-~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~ 323 (340)
T 1wkr_A 249 ---QY-ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTT 323 (340)
T ss_dssp ---HH-HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETT
T ss_pred ---cc-ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCC
Confidence 22 3789999999 8899999999999765421 12467655543 1 246999999999999999999
Q ss_pred CCEEEEeecCCCcc
Q 012841 286 NDKVGFWKTNCSEL 299 (455)
Q Consensus 286 n~rIGFa~s~C~~~ 299 (455)
++|||||+++|.+.
T Consensus 324 ~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 324 NKRLGLATTSFTTA 337 (340)
T ss_dssp TTEEEEEECTTTTC
T ss_pred CCeEEEEecCCCCC
Confidence 99999999999864
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.7e-38 Score=318.49 Aligned_cols=242 Identities=14% Similarity=0.237 Sum_probs=196.2
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGILGLG~~~~---------S~~~q 90 (455)
+.|.|++.|++|+.++|.+++|+|+|++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 143 (323)
T 1izd_A 67 DGATWSISYGDGSSASGDVYKDKVTVGG---VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDN 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEcCCCCeEEEEEEEEEEEECC---EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHH
Confidence 3699999999999889999999999998 57889999999987664432 56899999999754 47899
Q ss_pred HHhcCCCCCceEEeecCCCCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEEE
Q 012841 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (455)
Q Consensus 91 L~~~g~I~~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aii 168 (455)
|.++ +-+++||+||.+. ..|.|+|||+|+++ .+.+.|++.. ...+|.|.+++|.||+ .+. ..+..++|
T Consensus 144 l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~------~~~~~aii 213 (323)
T 1izd_A 144 VKSS-LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS------SDSITGIA 213 (323)
T ss_dssp HGGG-SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE------CCCEEEEE
T ss_pred HHHh-ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc------CCCceEEE
Confidence 9987 3348999999863 57999999999987 4455555443 5679999999999999 442 23458999
Q ss_pred ccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 169 DSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|+++.|++++|++.
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~ 276 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGASY-----DSSQGGYVFPSS-----------ASLPDFSVTI-GDYTATVPGEYISFA 276 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcEE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEecCHHHeEEe
Confidence 99999999999999999988732111 111223445664 3789999999 899999999999987
Q ss_pred ecccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
.. ++..|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 277 ~~--~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 277 DV--GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EC--STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cC--CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 64 367899966654 578999999999999999999999999985
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.4e-38 Score=319.17 Aligned_cols=241 Identities=15% Similarity=0.292 Sum_probs=194.9
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~~~~-~~~dGILGLG~~~~---------S~~~q 90 (455)
..|.|++.|++|+.++|.+++|+|++++ +++.++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 143 (323)
T 1bxo_A 67 SGYTWSISYGDGSSASGNVFTDSVTVGG---VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDT 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCeEEEEEEEEEEEECC---EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHH
Confidence 4699999999999889999999999998 47889999999987664443 46899999999654 48899
Q ss_pred HHhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCC-CCCceEEEeeeeEEcCEEeeeCCccccCCCcEE
Q 012841 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (455)
Q Consensus 91 L~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (455)
|+++ |. ++||+||.+. .+|.|+|||+|+++ .+.+.|++.. ...+|.|.+++|.|++ +. ..+..++
T Consensus 144 l~~~--i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~------~~~~~ai 211 (323)
T 1bxo_A 144 VKSS--LAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QS------GDGFSGI 211 (323)
T ss_dssp HGGG--BSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EE------EEEEEEE
T ss_pred HHHh--cCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--cc------CCCceEE
Confidence 9987 55 8999999863 57999999999986 4444554443 5679999999999999 21 1345899
Q ss_pred EccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 012841 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (455)
Q Consensus 168 iDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~ 247 (455)
|||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++
T Consensus 212 iDSGTs~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~l~~~~~~~ 274 (323)
T 1bxo_A 212 ADTGTTLLLLDDSVVSQYYSQVSGAQQ-----DSNAGGYVFDCS-----------TNLPDFSVSI-SGYTATVPGSLINY 274 (323)
T ss_dssp ECTTCSSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEECTT-----------CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred EeCCCCceeCCHHHHHHHHHhCCCceE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEEECHHHeEE
Confidence 999999999999999999988732211 111223445664 3789999999 89999999999998
Q ss_pred EecccCCeEEEEEEEcC--CCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 248 RHMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 248 ~~~~~~~~~Cl~~~~~~--~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
.... +...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 275 ~~~~-~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 275 GPSG-DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp EECS-SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred eccC-CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 7643 347899977654 578999999999999999999999999986
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.4e-38 Score=332.42 Aligned_cols=243 Identities=23% Similarity=0.315 Sum_probs=200.0
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEecc--CCCC-CCCCceEEeeCCCCC------ChHHHH
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLET--GDLY-TQRADGIMGLGRGRL------SVVDQL 91 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s--~~~~-~~~~dGILGLG~~~~------S~~~qL 91 (455)
..|.|++.|++|+ ++|.+++|+|++++ +++. +.|||++.++ +..+ ....|||||||++.+ +++++|
T Consensus 193 ~~~~~~i~YgdGs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L 267 (453)
T 2bju_A 193 DGTKVEMNYVSGT-VSGFFSKDLVTVGN---LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVEL 267 (453)
T ss_dssp EEEEEEEECSSSE-EEEEEEEEEEEETT---EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHH
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEEeC---cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHH
Confidence 3689999999998 69999999999998 4677 9999999887 5422 456899999999765 589999
Q ss_pred HhcCCCC-CceEEeecCCCCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEc
Q 012841 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (455)
Q Consensus 92 ~~~g~I~-~~FSl~L~~~~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiD 169 (455)
+++|+|. ++||+||++.+..+|.|+|||+|+++ .+.++|++.....+|.|.++ |.||++ + . .+..++||
T Consensus 268 ~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg~-~-~------~~~~aIiD 338 (453)
T 2bju_A 268 KNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNI-M-L------EKANCIVD 338 (453)
T ss_dssp HHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETTE-E-E------EEEEEEEC
T ss_pred HHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECcE-E-e------ccccEEEc
Confidence 9999997 89999999865568999999999886 45566655556789999999 999993 3 1 24589999
Q ss_pred cccceeeecHHHHHHHHHHHHHhccccccccCCCC-CcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 012841 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDP-NYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (455)
Q Consensus 170 SGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~ 248 (455)
|||+++++|++++++|.+++.+.. .... .|..+|+. ..+|+|+|+| +|.++.|+|++|+++
T Consensus 339 SGTsl~~lP~~~~~~l~~~i~~~~-------~~~g~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~yi~~ 400 (453)
T 2bju_A 339 SGTSAITVPTDFLNKMLQNLDVIK-------VPFLPFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEYYLQH 400 (453)
T ss_dssp TTCCSEEECHHHHHHHTTTSSCEE-------CTTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECHHHHEEE
T ss_pred CCCCeEecCHHHHHHHHHHhCCcc-------cCCCceEEEecCC----------CCCCcEEEEE-CCEEEEECHHHhEee
Confidence 999999999999999998875421 1122 45667753 3799999999 899999999999998
Q ss_pred ecccCCeEEEEEEEcC---CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 249 ~~~~~~~~Cl~~~~~~---~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
....+...|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 401 ~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 401 IEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7532356899766654 3589999999999999999999999999874
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=5.2e-37 Score=294.90 Aligned_cols=222 Identities=24% Similarity=0.434 Sum_probs=181.3
Q ss_pred ccccceEEEEEEeccCC-CCCCCCceEEeeCCCCC------ChHHHHHhcCCCC-CceEEeecCCCCC--CceEEECCCC
Q 012841 52 LVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEKGVIS-DSFSLCYGGMDVG--GGAMVLGGIT 121 (455)
Q Consensus 52 ~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~------S~~~qL~~~g~I~-~~FSl~L~~~~~~--~G~I~fGg~d 121 (455)
++++++.|||++.+++. +.....|||||||++.+ +++++|+++|+|. ++||+||++.+.. +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 57789999999998764 33567899999999865 5899999999998 8999999986433 8999999999
Q ss_pred CCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhcccccccc
Q 012841 122 PPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR 200 (455)
Q Consensus 122 ~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~ 200 (455)
+++ .+.+.|++.....+|.|.+++|.|+++.+. ...+..++|||||+++++|++++++|.+++.+...
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------ 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL------ 151 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec------
Confidence 986 456666666667899999999999998652 12346899999999999999999999999854321
Q ss_pred CCCCCcccccccCCcCCcccccCCCCeEEEEEcCCeEEEeCCCCceEEecccCCeEEEEEEEcC------CCCeeeccee
Q 012841 201 GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIV 274 (455)
Q Consensus 201 ~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~~------~~~~ILG~~F 274 (455)
....|..+|+. . .++|+|+|+| +|++++|++++|+++....++..|+..+... .+.||||++|
T Consensus 152 -~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 152 -IQGEYMIPCEK--------V-STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp -ETTEEEEEGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred -cCCcEEEECCC--------C-ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 12235566743 2 4799999999 8999999999999987643457899855542 4689999999
Q ss_pred eeeEEEEEECCCCEEEEeecC
Q 012841 275 VRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 275 lr~~yvVFD~en~rIGFa~s~ 295 (455)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999863
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.93 E-value=4.9e-26 Score=218.59 Aligned_cols=161 Identities=21% Similarity=0.313 Sum_probs=135.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCCCcccccceEEEEEEeccCC-CCCCCCceEEeeCCCCCC--hHHHHHhcCCCC
Q 012841 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS--VVDQLVEKGVIS 98 (455)
Q Consensus 22 ~C~y~i~Y~dGs~~sG~~~~D~v~ig~~~~~~~~~~~fG~~~~~s~~-~~~~~~dGILGLG~~~~S--~~~qL~~~g~I~ 98 (455)
.|.|.+.|++|+ ++|.+++|+|++++ +++.++.|||+..+.+. +....+|||||||++.++ ++++|+++|+|.
T Consensus 70 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~ 145 (239)
T 1b5f_A 70 GTFGAIIYGTGS-ITGFFSQDSVTIGD---LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVK 145 (239)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCS
T ss_pred CcEEEEEECCCc-EEEEEEEEEEEECC---cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCC
Confidence 589999999997 69999999999998 47789999999987542 334568999999999875 788999999998
Q ss_pred -CceEEeecCC--CCCCceEEECCCCCCC-CceeeecCCCCCCceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccce
Q 012841 99 -DSFSLCYGGM--DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTY 174 (455)
Q Consensus 99 -~~FSl~L~~~--~~~~G~I~fGg~d~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~ 174 (455)
++||+||.+. ....|.|+|||+|+++ .+.+.|.+.....+|.|.+++|.|+++.+.+.. ....++|||||++
T Consensus 146 ~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiDTGTt~ 221 (239)
T 1b5f_A 146 ERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCA----PGCQAFADSGTSL 221 (239)
T ss_dssp SSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTT----TCEEEEECTTCSS
T ss_pred CCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccC----CCCEEEEecCcch
Confidence 8999999874 2457999999999986 345555555566899999999999999876532 3458999999999
Q ss_pred eeecHHHHHHHHHHHH
Q 012841 175 AYLPGHAFAAFKDALI 190 (455)
Q Consensus 175 i~LP~~~~~~l~~ai~ 190 (455)
++||++++++|.++|+
T Consensus 222 ~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 222 LSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEECHHHHHHHHHHTT
T ss_pred hhCCHHHHHHHHHHhC
Confidence 9999999999999874
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=4.5e-16 Score=125.81 Aligned_cols=72 Identities=28% Similarity=0.529 Sum_probs=62.3
Q ss_pred CCCCeEEEEEcCCeEEEeCCCCceEEecccCCeEEEEEEEcC-----CCCeeecceeeeeEEEEEECCCCEEEEeecC
Q 012841 223 KTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS-----DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (455)
Q Consensus 223 ~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~~~~~Cl~~~~~~-----~~~~ILG~~Flr~~yvVFD~en~rIGFa~s~ 295 (455)
.++|+|+|+| +|+++.|+|++|+.+....+...|++.++.. ++.||||+.|||++|+|||++++|||||+++
T Consensus 11 ~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 11 SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 4799999999 8999999999999987543347899877652 4679999999999999999999999999863
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=96.30 E-value=0.0027 Score=51.52 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCC
Q 012841 21 KECIYERRYAEMSTSSGVLGVDVISFGN 48 (455)
Q Consensus 21 ~~C~y~i~Y~dGs~~sG~~~~D~v~ig~ 48 (455)
..|.|.+.|++|+ ++|.+++|+|+|++
T Consensus 70 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 70 NGTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred CCCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 3689999999998 79999999999986
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.64 E-value=0.069 Score=46.61 Aligned_cols=112 Identities=20% Similarity=0.291 Sum_probs=63.8
Q ss_pred CceEEEeeeeEEcCEEeeeCCccccCCCcEEEccccceeeecHHHHHHHHHHHHHhccccccccCCCCCcccccccCCcC
Q 012841 137 PYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGR 216 (455)
Q Consensus 137 ~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiiDSGTs~i~LP~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~C~~~~~~ 216 (455)
..+.|+ +.|||+.+ .++||||++.+.++.+..+.+- +...... +..+ .. .+.+
T Consensus 23 ~~l~v~---~~Ing~~v-----------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~--~~~~------~a--~g~G- 75 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPL-----------KAFVDSGAQMTIMSQACAERCN--IMRLVDR--RWAG------VA--KGVG- 75 (148)
T ss_dssp CCCEEE---EEETTEEE-----------EEEECTTCSSCEEEHHHHHHTT--CGGGEEG--GGCE------EC--CC---
T ss_pred CEEEEE---EEECCEEE-----------EEEEeCCCCcEeeCHHHHHHcC--CccccCc--ceeE------EE--EcCC-
Confidence 344454 45788866 6799999999999999888763 1110000 0000 00 0000
Q ss_pred CcccccCCCCeEEEEEcCCeEEEeCCCCceEEecccCCeEEEE-EEEcCCCCeeecceeeeeEEEEEECCCCEEEEeec
Q 012841 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (455)
Q Consensus 217 ~~~~~~~~lP~i~f~f~~g~~i~l~p~~Yi~~~~~~~~~~Cl~-~~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFa~s 294 (455)
-...........+.+ ++..+ .|-. ++...+...|||..||+++-.+.|..++++-|...
T Consensus 76 -~~~~~g~v~~~~I~I-g~~~~-----------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 76 -TQRIIGRVHLAQIQI-EGDFL-----------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp --CEEEEEEEEEEEEE-TTEEE-----------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred -ccEEEEEEEEEEEEE-CCEEE-----------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 000001223344555 34321 1222 23222446899999999999999999999999754
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.69 E-value=0.11 Score=44.72 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=25.1
Q ss_pred CCeeecceeeeeEEEEEECCCCEEEEe
Q 012841 266 STTLLGGIVVRNTLVTYDRGNDKVGFW 292 (455)
Q Consensus 266 ~~~ILG~~Flr~~yvVFD~en~rIGFa 292 (455)
...|||..||+++-.++|+.++++-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 358999999999999999999999996
No 40
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=38.97 E-value=43 Score=29.25 Aligned_cols=49 Identities=12% Similarity=0.294 Sum_probs=39.6
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEec
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (455)
....++- +++.+-.....|+|+..+.-+.||+.|+++..||.+---|..
T Consensus 93 ~G~~i~N--vD~tii~q~PKl~p~~~~m~~~la~~L~~~~~~V~vKAtT~E 141 (162)
T 3re3_A 93 KQYSISN--IDCTIIAQAPKMLPHIEKMRACLANILEIQISQINIKATTTE 141 (162)
T ss_dssp TTCEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHHTSCGGGEEEEEECCS
T ss_pred cCCEEEE--EEEEEEcCCCcchhHHHHHHHHHHHHHCCCCceEEEEEecCC
Confidence 4566765 555566788999999999999999999999999977655544
No 41
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=38.69 E-value=44 Score=28.87 Aligned_cols=49 Identities=10% Similarity=0.178 Sum_probs=39.4
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEec
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (455)
....++-+ ++.+=.....|.|+..+.-+.||+.|+++.+||.+---|..
T Consensus 87 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 135 (152)
T 1iv3_A 87 RGAKLLQA--SLVLTLDRPKLGPHRKALVDSLSRLMRLPQDRIGLTFKTSE 135 (152)
T ss_dssp TTCCEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred cCCEEEEE--EEEEEecCCcCHHHHHHHHHHHHHHhCCCCceEEEEEecCC
Confidence 45667764 44555688999999999999999999999999977655554
No 42
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=37.76 E-value=45 Score=29.01 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=39.8
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEecC
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (455)
.+..++-+. +.+-.....|.|+..+.-+.||+.|+++.+||.+---|..+
T Consensus 90 ~G~~i~NvD--~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 139 (160)
T 2pmp_A 90 AGYEIGNLD--ATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEK 139 (160)
T ss_dssp HTEEEEEEE--EEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEE--EEEEecCCcCHHHHHHHHHHHHHHHCCCcceEEEEEecCCC
Confidence 456777644 44556899999999999999999999999999776555443
No 43
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=37.49 E-value=47 Score=28.92 Aligned_cols=50 Identities=16% Similarity=0.341 Sum_probs=40.1
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEecC
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (455)
.+..++-+.+ .+-.....|.|+..+.-+.||+.|+++.+||.+---|..+
T Consensus 88 ~G~~i~NvD~--tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 137 (160)
T 1gx1_A 88 KGYTLGNVDV--TIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEK 137 (160)
T ss_dssp TTCEEEEEEE--EEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEE--EEEcCCCcchHHHHHHHHHHHHHhCCCCceEEEEEccCCC
Confidence 4567776544 4458899999999999999999999999999876555533
No 44
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=37.21 E-value=48 Score=28.84 Aligned_cols=49 Identities=14% Similarity=0.417 Sum_probs=40.0
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEec
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (455)
.+..++-+.+ .+-.....|.|+..+.-+.||+.|+++.+||.+---|..
T Consensus 89 ~G~~i~NvD~--tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 137 (159)
T 1t0a_A 89 KGFELGNLDV--TIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTE 137 (159)
T ss_dssp TTEEEEEEEE--EEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCT
T ss_pred cCCEEEEEEE--EEEcCCCcChHHHHHHHHHHHHHhCCCCceEEEEEecCC
Confidence 4677776544 445889999999999999999999999999987665554
No 45
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=33.77 E-value=17 Score=26.18 Aligned_cols=23 Identities=26% Similarity=0.047 Sum_probs=19.2
Q ss_pred CCCchhhHHHHhhhhccccceEE
Q 012841 362 KPNFTELSEFIAHELQVDDIEVH 384 (455)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~ 384 (455)
++..++.|..+|.|++||+++|.
T Consensus 7 ~v~aSPaaRrlA~e~gIdl~~V~ 29 (58)
T 3rnm_E 7 KTLATPAVRNLAMENNIKLSEVV 29 (58)
T ss_dssp -CCCCHHHHHHHHHTTCCGGGCC
T ss_pred CcCcCHHHHHHHHHcCCCHHHCC
Confidence 34567999999999999999874
No 46
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=33.60 E-value=56 Score=29.01 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=39.8
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEec
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (455)
.+..++- +++.+-.....|+|+..+.-+.||+.|+++..||.+---|..
T Consensus 110 ~G~~I~N--vD~tIiaq~PKl~p~~~~mr~~la~~L~i~~~~VnVKATT~E 158 (183)
T 3f0d_A 110 AGFAIRN--VDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNE 158 (183)
T ss_dssp TTEEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred cCCEEEE--EEEEEEcCCCcchhHHHHHHHHHHHHHCCCcceEEEEEecCC
Confidence 4566775 555566788999999999999999999999999977655544
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=29.44 E-value=44 Score=26.16 Aligned_cols=16 Identities=25% Similarity=0.609 Sum_probs=14.3
Q ss_pred cEEEccccceeeecHH
Q 012841 165 GTVLDSGTTYAYLPGH 180 (455)
Q Consensus 165 ~aiiDSGTs~i~LP~~ 180 (455)
.++||||++.+.+|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 6899999999999964
No 48
>3b6n_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; malaria isoprenoid biosynthesis and prenylation pathways ISPF; 2.26A {Plasmodium vivax sai-1}
Probab=29.18 E-value=38 Score=30.20 Aligned_cols=50 Identities=14% Similarity=0.186 Sum_probs=40.3
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEecC
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (455)
.+..+|-+.++ +=.....|.|+..+.-+.||+.|+++.+||.+---|..+
T Consensus 115 ~Gy~I~NvD~t--iiaq~PKi~p~~~~m~~nia~~L~i~~~~VnVKAtT~E~ 164 (187)
T 3b6n_A 115 RNYAIANVDII--VIAEVPKISPIREEIVRNISSALGISESQVSLKGKTHEQ 164 (187)
T ss_dssp TTEEEEEEEEE--EECSSSCSHHHHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEEE--EEeCCCcchHHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 45677765544 457889999999999999999999999999876655544
No 49
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=26.43 E-value=27 Score=29.34 Aligned_cols=36 Identities=6% Similarity=0.193 Sum_probs=31.1
Q ss_pred CCCchhhHHHHhhhhccccceEEEEEEEecCCceEE
Q 012841 362 KPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDYLV 397 (455)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (455)
+-.+.+|.+.||.+|+++..+++|-.|..-.|...+
T Consensus 65 ~~~~~~~~~~va~~lg~~~~~~RlW~~~~RqN~T~R 100 (130)
T 2kvr_A 65 NSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKR 100 (130)
T ss_dssp TSBHHHHHHHHHHHHCCCGGGCEEEECCCCBTTBCC
T ss_pred cCcHHHHHHHHHHHhCCCcccEEEEEeecCCCCCCC
Confidence 346889999999999999999999999887777654
No 50
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=24.69 E-value=29 Score=25.10 Aligned_cols=25 Identities=20% Similarity=0.142 Sum_probs=20.4
Q ss_pred CCCCCchhhHHHHhhhhccccceEE
Q 012841 360 HMKPNFTELSEFIAHELQVDDIEVH 384 (455)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (455)
+.+...++.+..+|+|++||+.+|.
T Consensus 2 ~~~~~asPaaRklA~e~gidl~~V~ 26 (62)
T 1w4i_A 2 SREVAAMPAARRLAKELGIDLSKVK 26 (62)
T ss_dssp CCSSEECHHHHHHHHHHTCCGGGSC
T ss_pred CCcccCChHHHHHHHHhCCChhhcC
Confidence 3455668899999999999999873
No 51
>2uzh_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; ISPF, lyase, mycobacteria, complex with CDP; HET: CDP IPE; 2.2A {Mycobacterium smegmatis}
Probab=24.16 E-value=90 Score=27.23 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=36.0
Q ss_pred cceEeeeEEEEEEEeecCCCCCCCchhhHHHHhhhhccccceEEEEEEEecCCce
Q 012841 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDY 395 (455)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (455)
....++-+ ++.+-.....|.|+..+.-+.||+.|+++ .|+..++++.
T Consensus 92 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~------V~vKAtT~E~ 138 (165)
T 2uzh_A 92 AGFVIGNA--TVQVIGNRPKVGPRREEAQQVLSELVGAP------VSVSATTTDG 138 (165)
T ss_dssp TTEEEEEE--EEEEESSSSCCGGGHHHHHHHHHHHHTSC------EEEEEECCTT
T ss_pred cCCEEEEE--EEEEEcCCCcchHHHHHHHHHHHHHhCCC------EEEEEecCCC
Confidence 45677764 44555688999999999999999999995 5666655543
No 52
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=23.23 E-value=28 Score=24.00 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=20.4
Q ss_pred CCCCCCchhhHHHHhhhhccccceEE
Q 012841 359 SHMKPNFTELSEFIAHELQVDDIEVH 384 (455)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (455)
+..++..++.+..+|+|++||+.+|.
T Consensus 6 ~~~~~~asP~aR~lA~e~gidl~~V~ 31 (51)
T 1bal_A 6 EQNNDALSPAIRRLLAEHNLDASAIK 31 (51)
T ss_dssp CCSSCCCCGGGTTHHHHTTCCTTSSC
T ss_pred cCCCCCCChHHHHHHHHcCCCccccC
Confidence 33455667889999999999998863
No 53
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=21.81 E-value=32 Score=22.30 Aligned_cols=18 Identities=28% Similarity=0.220 Sum_probs=16.1
Q ss_pred hhhHHHHhhhhccccceE
Q 012841 366 TELSEFIAHELQVDDIEV 383 (455)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~ 383 (455)
++.+..+|.|++||+++|
T Consensus 4 sP~ar~la~e~gidl~~v 21 (41)
T 2eq9_C 4 VPAARKLARELGIPIEEV 21 (41)
T ss_dssp CHHHHHHHHHTTCCGGGS
T ss_pred ChHHHHHHHHcCCChhhc
Confidence 578899999999999886
No 54
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=21.28 E-value=35 Score=21.98 Aligned_cols=18 Identities=28% Similarity=0.215 Sum_probs=15.9
Q ss_pred hhhHHHHhhhhccccceE
Q 012841 366 TELSEFIAHELQVDDIEV 383 (455)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~ 383 (455)
++.+..+|+|++||..+|
T Consensus 3 sP~ar~la~e~gidl~~v 20 (40)
T 2eq8_C 3 APSIRRLARELGVDLTRL 20 (40)
T ss_dssp CHHHHHHHHHHTCCGGGC
T ss_pred ChHHHHHHHHhCCChhhc
Confidence 577889999999999886
No 55
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=21.26 E-value=32 Score=22.20 Aligned_cols=18 Identities=28% Similarity=0.231 Sum_probs=15.9
Q ss_pred hhhHHHHhhhhccccceE
Q 012841 366 TELSEFIAHELQVDDIEV 383 (455)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~ 383 (455)
++.+..+|+|++||+++|
T Consensus 3 sP~ar~la~e~gidl~~v 20 (40)
T 2eq7_C 3 MPAAERLMQEKGVSPAEV 20 (40)
T ss_dssp CHHHHHHHHHTTCCTTTS
T ss_pred CcHHHHHHHHhCCChhhc
Confidence 577889999999999886
Done!