BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012844
(455 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 217 LDMDTGSDLTWIQCDAPCSSCAKGANPLYKP---RMGNILPYKDSLCMEIQRNHKPGYCE 273
L +D G W+ CD + Y+P R C + +PG C
Sbjct: 37 LVVDLGGRFLWVDCDQ------NYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPG-CN 89
Query: 274 TCQQCDYEIEYADHSSSMGVLARDELHLTIENGS-----LTKPNVVFGCAYDQQGLLLNT 328
+ ++++ G +A D + + +GS +T P +F CA LL N
Sbjct: 90 NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCA--PTSLLQNL 147
Query: 329 LVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHD--------LV 380
G+ GL R +++LPSQ AS K CL+ + + G+D +V
Sbjct: 148 ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIV 207
Query: 381 PSWGMAWVPMLDSP 394
+ + P+L +P
Sbjct: 208 SDKTLTYTPLLTNP 221
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 79/209 (37%), Gaps = 25/209 (11%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKP---RMGNILPYKDS 258
Y T + P L +D G W+ CD + Y+P R
Sbjct: 22 YVTTINQRTPLVSENLVVDLGGRFLWVDCDQ------NYVSSTYRPVRCRTSQCSLSGSI 75
Query: 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGS-----LTKPNV 313
C + +PG C + ++++ G +A D + + +GS +T P
Sbjct: 76 ACGDCFNGPRPG-CNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134
Query: 314 VFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYM 373
+F CA LL N G+ GL R +++LPSQ AS K CL+ + +
Sbjct: 135 IFSCA--PTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVI 192
Query: 374 FLGHD--------LVPSWGMAWVPMLDSP 394
G+D +V + + P+L +P
Sbjct: 193 IFGNDPYTFLPNIIVSDKTLTYTPLLTNP 221
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic
Proteinase From Rhizopus Chinensis. Implications For A
Mechanism Of Action
pdb|4APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|5APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|6APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|2APR|A Chain A, Structure And Refinement At 1.8 Angstroms Resolution Of
The Aspartic Proteinase From Rhizopus Chinensis
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 26/102 (25%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCM 261
Y+ + +G P + + LD DTGS WI C++C G
Sbjct: 17 YYGQVTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNCGSG--------------------- 54
Query: 262 EIQRNHKPGYCETCQQ--CDYEIEYADHSSSMGVLARDELHL 301
Q + P T Q + I Y D SS+ G+LA+D ++L
Sbjct: 55 --QTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNL 94
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|B Chain B, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|C Chain C, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|D Chain D, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 49/265 (18%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCM 261
Y+ M++G PP+ + +DTGS S+ A P I Y D+
Sbjct: 15 YYLEMLIGTPPQKLQILVDTGS-----------SNFAVAGTP-----HSYIDTYFDTERS 58
Query: 262 EIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQ 321
R+ + D ++Y S G + D +TI G T V ++
Sbjct: 59 STYRS---------KGFDVTVKYT-QGSWTGFVGED--LVTIPKGFNTSFLVNIATIFES 106
Query: 322 QGLLLNTLVKTDGILGLSRAKVSLPSQ--------LASQGIIKNV-------VGHCLTTN 366
+ L +K +GILGL+ A ++ PS L +Q I NV G + +
Sbjct: 107 ENFFLPG-IKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGS 165
Query: 367 AGGGGYMFLGHDLVPSW--GMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGW 424
GG + LG + PS G W + + Y EILK+ G LNL R
Sbjct: 166 GTNGGSLVLG-GIEPSLYKGDIWYTPIKEEWY--YQIEILKLEIGGQSLNLDCREYNADK 222
Query: 425 ALFDTGSSYTYFTKQAYSELIASVS 449
A+ D+G++ ++ + ++ +V+
Sbjct: 223 AIVDSGTTLLRLPQKVFDAVVEAVA 247
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A
pdb|1FQ4|A Chain A, Crystal Structure Of A Complex Between Hydroxyethylene
Inhibitor Cp- 108,420 And Yeast Aspartic Proteinase A
pdb|1FQ5|A Chain A, X-Ray Struture Of A Cyclic Statine Inhibitor Pd-129,541
Bound To Yeast Proteinase A
pdb|1FQ6|A Chain A, X-Ray Structure Of Glycol Inhibitor Pd-133,450 Bound To
Saccharopepsin
pdb|1FQ7|A Chain A, X-Ray Structure Of Inhibitor Cp-72,647 Bound To
Saccharopepsin
pdb|1FQ8|A Chain A, X-Ray Structure Of Difluorostatine Inhibitor Cp81,198
Bound To Saccharopepsin
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y + Y+T + +G PP+ + + +DTGS W+ P + C A L+
Sbjct: 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWV----PSNECGSLACFLHS---------- 55
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
+ +H+ ++ I+Y S G +++D L + G LT P F
Sbjct: 56 -------KYDHEASSSYKANGTEFAIQYG-TGSLEGYISQDTLSI----GDLTIPKQDFA 103
Query: 317 CAYDQQGLLLNTLVKTDGILGLSRAKVSL 345
A + GL K DGILGL +S+
Sbjct: 104 EATSEPGLTF-AFGKFDGILGLGYDTISV 131
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant,
Mvv
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y + Y+T + +G PP+ + + +DTGS W+ P + C A L+
Sbjct: 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWV----PSNECGSLACFLHS---------- 55
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
+ +H+ ++ I+Y S G +++D L + G LT P F
Sbjct: 56 -------KYDHEASSSYKANGTEFAIQYG-TGSLEGYISQDTLSI----GDLTIPKQDFA 103
Query: 317 CAYDQQGLLLNTLVKTDGILGLSRAKVSL 345
A + GL K DGILGL +S+
Sbjct: 104 EATSEPGLTF-AFGKFDGILGLGYDTISV 131
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant
Inhibitor
pdb|1DPJ|A Chain A, The Structure Of Proteinase A Complexed With Ia3 Peptide
Inhibitor
pdb|1FMU|A Chain A, Structure Of Native Proteinase A In P3221 Space Group.
pdb|1FMX|A Chain A, Structure Of Native Proteinase A In The Space Group P21
pdb|1FMX|B Chain B, Structure Of Native Proteinase A In The Space Group P21
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y + Y+T + +G PP+ + + +DTGS W+ P + C A L+
Sbjct: 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWV----PSNECGSLACFLHS---------- 55
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
+ +H+ ++ I+Y S G +++D L + G LT P F
Sbjct: 56 -------KYDHEASSSYKANGTEFAIQYG-TGSLEGYISQDTLSI----GDLTIPKQDFA 103
Query: 317 CAYDQQGLLLNTLVKTDGILGLSRAKVSL 345
A + GL K DGILGL +S+
Sbjct: 104 EATSEPGLTF-AFGKFDGILGLGYDTISV 131
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6
pdb|1UH8|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 8.0
pdb|1UH9|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 7.0
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 26/102 (25%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCM 261
Y+ + +G P + + LD DTGS WI C++C
Sbjct: 17 YYGQVTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNCG----------------------- 52
Query: 262 EIQRNHKPGYCETCQQ--CDYEIEYADHSSSMGVLARDELHL 301
Q + P T Q + I Y D SS+ G+LA+D ++L
Sbjct: 53 SRQTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNL 94
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 43/262 (16%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G PP+ + + DTGS W+ C S A ++ + P
Sbjct: 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVP-SVYCQSQACTSHSRFNP--------- 58
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
+ Y Q + ++Y S + G D L + S+ PN FG
Sbjct: 59 ---------SESSTYSTNGQ--TFSLQYGSGSLT-GFFGYDTLTVQ----SIQVPNQEFG 102
Query: 317 CAYDQQGLLLNTLVKTDGILGLSRAKVSL-PSQLASQGIIKN------VVGHCLTTNAG- 368
+ ++ G + DGI+GL+ +S+ + A QG+++ V L+ G
Sbjct: 103 LSENEPGTNF-VYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161
Query: 369 -GGGYMFLGHDLVPSWG-MAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWAL 426
GG +F G D G + W P+ + ++ E L S + G + A+
Sbjct: 162 SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQ------AI 215
Query: 427 FDTGSSYTYFTKQAYSELIASV 448
DTG+S +Q S L+ +
Sbjct: 216 VDTGTSLLTVPQQYMSALLQAT 237
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
Length = 403
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 287 HSSSMGVLARDELHLTIENGS-------LTKPNVVFGCAYD---QQGLLLNTLVKTDGIL 336
+ +G L D L + GS +T P +F CA Q+GL NT G+
Sbjct: 104 QQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT----QGVA 159
Query: 337 GLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLG 376
GL A +SLP+QLAS ++ CL+ G + G
Sbjct: 160 GLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFG 199
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine
Pepsinogen
Length = 370
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 38/204 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P C+
Sbjct: 53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV----PSVYCS------------------ 90
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 91 -SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 145
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLP------SQLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 146 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 204
Query: 369 GGGYMFLG--HDLVPSWGMAWVPM 390
G + LG + + WVP+
Sbjct: 205 SGSVVLLGGIDSSYYTGSLNWVPV 228
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms
Resolution
Length = 370
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 38/204 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P C+
Sbjct: 53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV----PSVYCS------------------ 90
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 91 -SLACSDHNQFNPDDSSTFEATXQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 145
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLP------SQLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 146 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 204
Query: 369 GGGYMFLG--HDLVPSWGMAWVPM 390
G + LG + + WVP+
Sbjct: 205 SGSVVLLGGIDSSYYTGSLNWVPV 228
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii.
Three-Dimensional Structure Of The Hexagonal Crystal
Form Of Porcine Pepsin At 2.3 Angstroms Resolution
Length = 326
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P + Y
Sbjct: 9 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV------------------PSV-----YC 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 46 SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 160
Query: 369 GGGYMFLG 376
G + LG
Sbjct: 161 SGSVVLLG 168
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex
Reveals A Novel Crystal Packing Induced By Minor
Chemical Alterations In The Inhibitor
pdb|1PSA|B Chain B, Structure Of A Pepsin(Slash)renin Inhibitor Complex
Reveals A Novel Crystal Packing Induced By Minor
Chemical Alterations In The Inhibitor
pdb|1YX9|A Chain A, Effect Of Dimethyl Sulphoxide On The Crystal Structure Of
Porcine Pepsin
Length = 326
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P + Y
Sbjct: 9 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV------------------PSV-----YC 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 46 SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 160
Query: 369 GGGYMFLG 376
G + LG
Sbjct: 161 SGSVVLLG 168
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin.
Evidence For A Flexible Subdomain
Length = 326
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P C+
Sbjct: 9 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV----PSVYCS------------------ 46
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 47 -SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 160
Query: 369 GGGYMFLG 376
G + LG
Sbjct: 161 SGSVVLLG 168
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To
Porcine Pepsin
Length = 326
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P + Y
Sbjct: 9 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV------------------PSV-----YC 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 46 SSLACSDHNQFNPDDSSTFEATXQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 160
Query: 369 GGGYMFLG 376
G + LG
Sbjct: 161 SGSVVLLG 168
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine
Pepsin Refined At 1.8 Angstroms Resolution
Length = 326
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P C+
Sbjct: 9 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV----PSVYCS------------------ 46
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T + E+ + SM G+L D T++ G ++ N +F
Sbjct: 47 -SLACSDHNQFNPDDSSTFEATXQELSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAG 368
G + + G L DGILGL+ +S L QG++ +++ L++N
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD 160
Query: 369 GGGYMFLG 376
G + LG
Sbjct: 161 SGSVVLLG 168
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
pdb|3HD8|C Chain C, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
Length = 389
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 6/154 (3%)
Query: 296 RDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGII 355
R + T N +++ NV A LL + + G+ GL+ + ++LPSQ+AS +
Sbjct: 103 RFAANTTDGNKPVSEVNVRVLAACAPSKLLASLPRGSTGVAGLAGSGLALPSQVASAQKV 162
Query: 356 KNVVGHCLTTNAGGGGYMFLGHDLVP----SWGMAWVPMLDSPFMELYHTEILKINYGSS 411
N CL T GG G G +P + M + P++ ++ I ++
Sbjct: 163 PNKFLLCLPT--GGPGVAIFGGGPLPWPQFTQSMDYTPLVAKGGSPAHYISARSIKVENT 220
Query: 412 PLNLGARNSQVGWALFDTGSSYTYFTKQAYSELI 445
+ + R G + T Y + Y L+
Sbjct: 221 RVPISERALATGGVMLSTRLPYVLLRRDVYRPLV 254
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDS 258
D Y+ + +G PP + + DTGS W+ + CS+ A + +KPR +
Sbjct: 11 DTEYYGVISIGTPPESFKVIFDTGSSNLWVS-SSHCSAQACSNHNKFKPRQSST------ 63
Query: 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCA 318
Y ET + D + Y G+L +D T+ G + PN G +
Sbjct: 64 ------------YVETGKTVD--LTYGT-GGMRGILGQD----TVSVGGGSDPNQELGES 104
Query: 319 YDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGII-KNVVGHCLTTNAGGGG 371
+ G DGILGL+ ++ + SQ ++ K++ L+ G
Sbjct: 105 QTEPG-PFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGS 163
Query: 372 YMFLG--HDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDT 429
+ LG + + + W+P+ + ++ + + +N G + G + A+ DT
Sbjct: 164 EVMLGGVDNSHYTGSIHWIPVTAEKYWQV-ALDGITVN-GQTAACEGCQ------AIVDT 215
Query: 430 GSSYTYFTKQAYSELIASVSTLIHVL 455
G+ S+++A VS L +++
Sbjct: 216 GT----------SKIVAPVSALANIM 231
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor I
pdb|1T6G|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
pdb|1T6G|B Chain B, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
Length = 381
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 85/243 (34%), Gaps = 30/243 (12%)
Query: 217 LDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGY-CETC 275
L +D L W CD G P + +P C+ PG +C
Sbjct: 26 LVLDVAGPLVWSTCD--------GGQPPAE------IPCSSPTCLLANAYPAPGCPAPSC 71
Query: 276 ------QQCD-YEIEYADHSSSMGVLARDELHLTIENGS--LTKPNVVFGCAYDQQGLLL 326
+ C Y + + G L+ +GS ++K NV A LL
Sbjct: 72 GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLA 131
Query: 327 NTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVP----S 382
+ + G+ GL+ + ++LP+Q+AS + N CL T GG G G VP +
Sbjct: 132 SLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPT--GGPGVAIFGGGPVPWPQFT 189
Query: 383 WGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYS 442
M + P++ ++ I G + + + G + T Y Y
Sbjct: 190 QSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYR 249
Query: 443 ELI 445
L+
Sbjct: 250 PLM 252
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In
Complex With Bacillus Subtilis Xylanase
Length = 381
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 85/243 (34%), Gaps = 30/243 (12%)
Query: 217 LDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGY-CETC 275
L +D L W C KG P + +P C+ PG +C
Sbjct: 26 LVLDVAGPLVWSTC--------KGGQPPAE------IPCSSPTCLLANAYPAPGCPAPSC 71
Query: 276 ------QQCD-YEIEYADHSSSMGVLARDELHLTIENGS--LTKPNVVFGCAYDQQGLLL 326
+ C Y + + G L+ +GS ++K NV A LL
Sbjct: 72 GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLA 131
Query: 327 NTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVP----S 382
+ + G+ GL+ + ++LP+Q+AS + N CL T GG G G VP +
Sbjct: 132 SLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPT--GGPGVAIFGGGPVPWPQFT 189
Query: 383 WGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYS 442
M + P++ ++ I G + + + G + T Y Y
Sbjct: 190 QSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYR 249
Query: 443 ELI 445
L+
Sbjct: 250 PLM 252
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution
Length = 320
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 50/248 (20%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G PP+ + + DTGS W+ P C K
Sbjct: 8 YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWV----PSIYC------------------K 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
++C R P T + + + SM G L D T+ ++ PN
Sbjct: 46 SNVCKNHHR-FDPRKSSTFRNLGKPLSIHYGTGSMEGFLGYD----TVTVSNIVDPNQTV 100
Query: 316 GCAYDQQGLLLNTLVKTDGILGL------SRAKVSLPSQLASQGIIKNVVGHCLTTNAGG 369
G + +Q G + T + DGILGL S V + + + ++ + G
Sbjct: 101 GLSTEQPGEVF-TYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQ 159
Query: 370 GGYMFLGHDLVPSW---GMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVG--W 424
G + LG + PS+ + WVP+ + + + + + IN G + VG
Sbjct: 160 GSMLTLGA-IDPSYYTGSLHWVPVTLQQYWQ-FTVDSVTIN--------GVAVACVGGCQ 209
Query: 425 ALFDTGSS 432
A+ DTG+S
Sbjct: 210 AILDTGTS 217
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|B Chain B, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|C Chain C, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase
Length = 478
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y + YF + VG PP+ + + DTGS W+ P + C R YK
Sbjct: 49 YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWV----PSAKCYFSIACYLHSR------YK 98
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
++N KP I+Y S + G + D + + G L + F
Sbjct: 99 AGASSTYKKNGKPA----------AIQYGTGSIA-GYFSEDSVTV----GDLVVKDQEFI 143
Query: 317 CAYDQQGLLLNTLVKTDGILGLSRAKVSLPS------QLASQGIIKNVV 359
A + G+ + K DGILGL ++S+ ++ QG++ + V
Sbjct: 144 EATKEPGITF-LVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPV 191
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L.
pdb|1B5F|C Chain C, Native Cardosin A From Cynara Cardunculus L
Length = 239
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 30/161 (18%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDS 258
D YF + +G PP+ + + DTGS + W+ +S A A+ +Y+ S
Sbjct: 12 DTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYES----------S 61
Query: 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCA 318
+ N G I Y S + G ++D + + G L F A
Sbjct: 62 DSSTYKENGTFG----------AIIYGTGSIT-GFFSQDSVTI----GDLVVKEQDFIEA 106
Query: 319 YDQ-QGLLLNTLVKTDGILGLSRAKVSLPS--QLASQGIIK 356
D+ + L+ L DGILGLS +S+P + +QG++K
Sbjct: 107 TDEADNVFLHRLF--DGILGLSFQTISVPVWYNMLNQGLVK 145
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|1QRP|E Chain E, Human Pepsin 3a In Complex With A Phosphonate Inhibitor
Iva-Val-Val- Leu(P)-(O)phe-Ala-Ala-Ome
pdb|1PSN|A Chain A, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|3UTL|A Chain A, Human Pepsin 3b
Length = 326
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 29/149 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P + Y
Sbjct: 9 YLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWV------------------PSV-----YC 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T Q + + SM G+L D T++ G ++ N +F
Sbjct: 46 SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVS 344
G + + G L DGILGL+ +S
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSIS 129
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution
Length = 326
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 29/149 (19%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G P + + + DTGS W+ P + Y
Sbjct: 9 YLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWV------------------PSV-----YC 45
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSM-GVLARDELHLTIENGSLTKPNVVF 315
SL P T Q + + SM G+L D T++ G ++ N +F
Sbjct: 46 SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYD----TVQVGGISDTNQIF 101
Query: 316 GCAYDQQGLLLNTLVKTDGILGLSRAKVS 344
G + + G L DGILGL+ +S
Sbjct: 102 GLSETEPGSFL-YYAPFDGILGLAYPSIS 129
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
pdb|2QZX|B Chain B, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
Length = 342
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 107/274 (39%), Gaps = 53/274 (19%)
Query: 191 PLRGNIYPDGLYFTYMI-VGNPPRPYYLDMDTGSDLTWI-QCDAPCSSCAKGANPLYKPR 248
P+ ++ + + +T I VG+ + + +DTGS WI + C P ++
Sbjct: 2 PVAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICI-------PKWRGD 54
Query: 249 MGNILPYKDSLCMEIQRNHKPGYCETCQQCD--YEIEYADHSSSMGVLARDELHLTIENG 306
G+ S + P T Q + ++I+Y D S + G L +D T+ G
Sbjct: 55 KGDFCKSAGS--------YSPASSRTSQNLNTRFDIKYGDGSYAKGKLYKD----TVGIG 102
Query: 307 SLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--------SLPSQLASQGIIKNV 358
++ + +F + GILG+ +LP L +QGII
Sbjct: 103 GVSVRDQLFANVWSTSA--------RKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154
Query: 359 VGHCLTTN---AGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNL 415
+ L N A G +F G D G ++D P T K+ G +N+
Sbjct: 155 -AYSLYLNSAEASTGQIIFGGIDKAKYSG----SLVDLPI-----TSEKKLTVGLRSVNV 204
Query: 416 GARNSQVGW-ALFDTGSSYTYFTKQAYSELIASV 448
RN L D+G++ +YFT+ ++ ++
Sbjct: 205 RGRNVDANTNVLLDSGTTISYFTRSIVRNILYAI 238
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 58 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 96
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 15 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 53
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 12 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 50
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 15 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 53
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 11 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 49
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
Length = 333
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 8 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 46
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 15 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 53
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAK 239
Y D Y+ + +G PP+ + + DTGS W+ P S C++
Sbjct: 15 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWV----PSSKCSR 53
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
Y D YF + +G+PP+ + + DTGS W+ C+S A + ++P +
Sbjct: 20 YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVP-SVYCTSPACKTHSRFQPSQSSTY--- 75
Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
+PG + I+Y S S G++ D++ + LT FG
Sbjct: 76 ----------SQPGQ-------SFSIQYGTGSLS-GIIGADQVSVE----GLTVVGQQFG 113
Query: 317 CAYDQQGLLLNTLVKT--DGILGLSRAKVSL 345
+ + G T V DGILGL +++
Sbjct: 114 ESVTEPG---QTFVDAEFDGILGLGYPSLAV 141
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation,
Kinetic Characterization And X-Ray Analysis At
2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf
Chymosin
Length = 323
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPR 248
Y D YF + +G PP+ + + DTGS W+ C S A + + PR
Sbjct: 11 YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVP-SIYCKSNACKNHQRFDPR 61
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972
pdb|1CMS|A Chain A, The Three-Dimensional Structure Of Recombinant Bovine
Chymosin At 2.3 Angstroms Resolution
pdb|4CMS|A Chain A, X-Ray Analyses Of Aspartic Proteinases Iv. Structure And
Refinement At 2.2 Angstroms Resolution Of Bovine
Chymosin
pdb|4AA8|A Chain A, Bovine Chymosin At 1.8a Resolution
Length = 323
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPR 248
Y D YF + +G PP+ + + DTGS W+ C S A + + PR
Sbjct: 11 YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVP-SIYCKSNACKNHQRFDPR 61
>pdb|3C9X|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic
Proteinase
pdb|3EMY|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic
Proteinase Complexed With Pepstatin A
Length = 329
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKP 247
D Y T + +G P + LD DTGS W+ S A G + +Y P
Sbjct: 14 DSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATG-HAIYTP 61
>pdb|1IBQ|A Chain A, Aspergillopepsin From Aspergillus Phoenicis
pdb|1IBQ|B Chain B, Aspergillopepsin From Aspergillus Phoenicis
Length = 325
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 29/145 (20%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDS 258
D Y T + VG +LD DTGS W+ D SS G + LY P
Sbjct: 13 DEEYLTPVTVGK--STLHLDFDTGSADLWVFSDELPSSEQTG-HDLYTPSS--------- 60
Query: 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCA 318
GY ++I Y D SS+ G + RD + + G T V +
Sbjct: 61 -----SATKLSGYS-------WDISYGDGSSASGDVYRDTVTV---GGVTTNKQAVEAAS 105
Query: 319 YDQQGLLLNTLVKTDGILGLSRAKV 343
+ +T DG+LGL+ + +
Sbjct: 106 KISSEFVQDT--ANDGLLGLAFSSI 128
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans
Complexed With A70450
pdb|3PVK|A Chain A, Secreted Aspartic Protease 2 In Complex With Benzamidine
pdb|3Q70|A Chain A, Secreted Aspartic Protease In Complex With Ritonavir
Length = 342
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWI-QCDAPCSSCAKGANPLYKPRMGNILPYKDSLC 260
Y + VG+ + + +DTGS W+ + C + + G P S
Sbjct: 14 YAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSAS 73
Query: 261 MEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDEL---HLTIENGSLTKPNVVFGC 317
++ + P ++I Y D SSS G L +D + ++I+N L V
Sbjct: 74 QDL---NTP----------FKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLAD---VDST 117
Query: 318 AYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGII-KNVVGHCLTT-NAGGGGYMFL 375
+ DQ +L KT+ G + ++P L QG+I KN L + +A G +F
Sbjct: 118 SIDQG--ILGVGYKTNEAGG---SYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFG 172
Query: 376 GHDLVP-SWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYT 434
G D S + +P+ L+I+ GS ++ N+ L D+G++ T
Sbjct: 173 GVDNAKYSGSLIALPVT--------SDRELRISLGSVEVSGKTINTDNVDVLLDSGTTIT 224
Query: 435 YFTKQAYSELIAS 447
Y + ++I +
Sbjct: 225 YLQQDLADQIIKA 237
>pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex
Lacteus
Length = 340
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231
Y + VG+P Y L +DTGS TW+ D
Sbjct: 14 YVVNVGVGSPATTYSLLVDTGSSNTWLGAD 43
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans
pdb|2H6T|A Chain A, Secreted Aspartic Proteinase (Sap) 3 From Candida Albicans
Complexed With Pepstatin A
Length = 340
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 48/258 (18%)
Query: 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCM 261
Y + + VG+ + + +DTGS W+ +G +P + G Y S
Sbjct: 14 YASDITVGSNKQKLTVVIDTGSSDLWVPDSQVSCQAGQGQDPNFCKNEG---TYSPSSSS 70
Query: 262 EIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENG--SLTKPNVVFGCAY 319
Q + P + IEY D ++S G +D TI G S+TK
Sbjct: 71 SSQNLNSP----------FSIEYGDGTTSQGTWYKD----TIGFGGISITK--------- 107
Query: 320 DQQGLLLNTLVKTDGILGLSRAK-------VSLPSQLASQGII-KNVVGHCLTT-NAGGG 370
QQ + + GILG+ ++P L +QGII KN L + A G
Sbjct: 108 -QQFADVTSTSVDQGILGIGYKTHEAEGNYDNVPVTLKNQGIISKNAYSLYLNSRQATSG 166
Query: 371 GYMFLGHDLVPSWG-MAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDT 429
+F G D G + +P+ + + H +K+ +N L D+
Sbjct: 167 QIIFGGVDNAKYSGTLIALPVTSDNELRI-HLNTVKV--AGQSINADVD------VLLDS 217
Query: 430 GSSYTYFTKQAYSELIAS 447
G++ TY + ++I++
Sbjct: 218 GTTITYLQQGVADQVISA 235
>pdb|1WGQ|A Chain A, Solution Structure Of The Pleckstrin Homology Domain Of
Mouse Ethanol Decreased 4 Protein
Length = 109
Score = 28.9 bits (63), Expect = 6.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 117 DENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDG 163
DEN ES VF L HK + V + D R++D E V+ + G
Sbjct: 63 DENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGPSSG 109
>pdb|4FD0|A Chain A, Crystal Structure Of A Leucine Rich Hypothetical Protein
(Baccac_03700) From Bacteroides Caccae Atcc 43185 At
2.07 A Resolution
Length = 404
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 106 TLQDRYKSNN-DDENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGI 164
T D YK ++ EN V L F I ++ + + LG +DL G +V +DG
Sbjct: 3 TENDEYKKDSPSAENPAEPVGALLEDFSIEQLPAKTI-YALGENIDLTGLNVTGKYDDGK 61
Query: 165 IRPHK 169
RP K
Sbjct: 62 QRPVK 66
>pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases
pdb|2ER0|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes
pdb|2ER6|E Chain E, The Structure Of A Synthetic Pepsin Inhibitor Complexed
With Endothiapepsin.
pdb|2ER7|E Chain E, X-Ray Analyses Of Aspartic Proteinases.Iii.
Three-Dimensional Structure Of Endothiapepsin Complexed
With A Transition-State Isostere Inhibitor Of Renin At
1.6 Angstroms Resolution
pdb|2ER9|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes.
pdb|3ER3|E Chain E, The Active Site Of Aspartic Proteinases
pdb|3ER5|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER1|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER2|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER4|E Chain E, High-Resolution X-Ray Analyses Of Renin Inhibitor-Aspartic
Proteinase Complexes
pdb|5ER1|E Chain E, A Rational Approach To The Design Of Antihypertensives.
X-Ray Studies Of Complexes Between Aspartic Proteinases
And Aminoalcohol Renin Inhibitors
pdb|5ER2|E Chain E, High-Resolution X-Ray Diffraction Study Of The Complex
Between Endothiapepsin And An Oligopeptide Inhibitor.
The Analysis Of The Inhibitor Binding And Description Of
The Rigid Body Shift In The Enzyme
pdb|1EED|P Chain P, X-Ray Crystallographic Analysis Of Inhibition Of
Endothiapepsin By Cyclohexyl Renin Inhibitors
pdb|1ENT|E Chain E, X-Ray Analyses Of Aspartic Proteinases. The
Three-Dimensional Structure At 2.1 Angstroms Resolution
Of Endothiapepsin
pdb|1EPL|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPM|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPN|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPO|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Cp-81,282 (Mor Phe Nle Chf Nme)
pdb|1EPP|E Chain E, Endothia Aspartic Proteinase (endothiapepsin) Complexed
With Pd-130, 693 (mas Phe Lys+mtf Sta Mba)
pdb|1EPQ|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-133, 450 (Sot Phe Gly+scc Gcl)
pdb|1E5O|E Chain E, Endothiapepsin Complex With Inhibitor Db2
pdb|1E81|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd61395
pdb|1E82|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd59601
pdb|1E80|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd56133
pdb|1OD1|A Chain A, Endothiapepsin Pd135,040 Complex
pdb|4APE|A Chain A, The Active Site Of Aspartic Proteinases
pdb|2V00|A Chain A, X-Ray Crystal Structure Of Endothiapepsin Complexed With
Compound 1
pdb|3LZY|A Chain A, Crystal Structure Of Endothiapesin In Complex With Xenon
pdb|3PB5|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBZ|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCW|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCZ|A Chain A, Endothiapepsin In Complex With Benzamidine
pdb|3PGI|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PRS|A Chain A, Endothiapepsin In Complex With Ritonavir
pdb|3PI0|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLL|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PM4|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMU|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMY|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PSY|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3PWW|A Chain A, Endothiapepsin In Complex With Saquinavir
pdb|3Q6Y|A Chain A, Endothiapepsin In Complex With A Pyrrolidine Based
Inhibitor
pdb|3T6I|A Chain A, Endothiapepsin In Complex With An Azepin Derivative
pdb|3T7P|A Chain A, Endothiapepsin In Complex With A Hydrazide Derivative
pdb|3T7Q|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3T7X|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
Length = 330
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPR 248
D Y T + +G P + LD DTGS W+ +S G +Y P
Sbjct: 14 DDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDG-QTIYTPS 62
>pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-135, 040
Length = 330
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPR 248
D Y T + +G P + LD DTGS W+ +S G +Y P
Sbjct: 14 DDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDG-QTIYTPS 62
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,320,175
Number of Sequences: 62578
Number of extensions: 538812
Number of successful extensions: 1080
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1039
Number of HSP's gapped (non-prelim): 54
length of query: 455
length of database: 14,973,337
effective HSP length: 102
effective length of query: 353
effective length of database: 8,590,381
effective search space: 3032404493
effective search space used: 3032404493
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)