Query 012844
Match_columns 455
No_of_seqs 276 out of 1142
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 17:19:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012844.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012844hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.5E-44 5.3E-49 375.4 24.6 252 185-452 6-295 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 3.8E-43 1.3E-47 359.9 23.0 229 187-451 45-282 (370)
3 2apr_A Rhizopuspepsin; hydrola 100.0 3.9E-42 1.3E-46 345.9 25.6 219 198-452 13-242 (325)
4 1b5f_A Protein (cardosin A); h 100.0 1.9E-42 6.5E-47 334.2 21.3 224 189-450 4-238 (239)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-41 5.1E-46 345.1 24.5 229 187-451 12-251 (351)
6 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-41 4.3E-46 350.3 20.9 225 187-450 50-291 (383)
7 4aa9_A Chymosin; hydrolase, as 100.0 8.3E-42 2.8E-46 342.0 19.0 225 190-451 3-236 (320)
8 1am5_A Pepsin, acid proteinase 100.0 1.5E-41 5.1E-46 341.2 20.8 227 188-451 2-237 (324)
9 3cms_A Chymosin B; hydrolase, 100.0 1.8E-41 6.1E-46 340.7 21.0 227 188-451 4-239 (323)
10 1mpp_A Pepsin; hydrolase(acid 100.0 5.7E-41 1.9E-45 341.8 24.5 233 185-451 5-260 (361)
11 3aup_A SBG7S, BG, basic 7S glo 100.0 8.3E-41 2.8E-45 345.8 26.1 251 186-452 8-289 (403)
12 2qzx_A Candidapepsin-5; aspart 100.0 6.4E-41 2.2E-45 339.0 22.9 222 187-452 2-242 (342)
13 1j71_A Candidapepsin, aspartic 100.0 3.7E-41 1.3E-45 339.9 21.1 221 187-451 2-241 (334)
14 1dpj_A Proteinase A; proteinas 100.0 4.6E-41 1.6E-45 338.3 21.2 224 189-450 4-240 (329)
15 1htr_B Gastricsin; aspartyl pr 100.0 3.2E-41 1.1E-45 339.5 20.0 226 190-451 5-240 (329)
16 3c9x_A Trichoderma reesei aspa 100.0 5.3E-41 1.8E-45 338.2 20.9 218 197-450 12-241 (329)
17 2bju_A Plasmepsin II; aspartic 100.0 2.9E-41 9.9E-46 354.3 18.9 222 188-450 128-360 (453)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.4E-40 4.7E-45 335.7 23.1 219 187-452 2-244 (339)
19 1oew_A Endothiapepsin; hydrola 100.0 1.2E-40 4E-45 335.7 22.0 216 198-450 13-240 (329)
20 3k1w_A Renin; protease, altern 100.0 8.9E-41 3.1E-45 337.1 20.7 229 185-451 5-249 (341)
21 3pvk_A Candidapepsin-2; hydrol 100.0 2E-40 6.7E-45 334.8 22.4 221 188-452 3-242 (342)
22 1t6e_X Xylanase inhibitor; two 100.0 4.8E-40 1.6E-44 337.7 22.7 240 188-452 3-259 (381)
23 1miq_A Plasmepsin; aspartic pr 100.0 1.9E-40 6.5E-45 340.4 18.4 220 188-450 52-284 (375)
24 1qdm_A Prophytepsin; aspartic 100.0 1.8E-39 6.1E-44 343.2 19.9 226 188-451 42-282 (478)
25 3qvc_A Histo-aspartic protease 100.0 7.3E-40 2.5E-44 343.7 16.7 221 188-451 127-360 (451)
26 1yg9_A Aspartic protease BLA G 100.0 3.1E-39 1.1E-43 325.5 20.4 223 188-451 7-242 (330)
27 1ibq_A Aspergillopepsin; aspar 100.0 4.4E-39 1.5E-43 323.7 20.9 213 198-450 12-236 (325)
28 1izd_A Aspartic proteinase; su 100.0 7.2E-39 2.4E-43 322.0 19.3 211 199-450 14-236 (323)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.5E-38 5.1E-43 326.2 22.0 222 199-452 12-250 (383)
30 1bxo_A Protein (penicillopepsi 100.0 5.5E-39 1.9E-43 322.7 17.8 217 188-450 7-235 (323)
31 2qp8_A Beta-secretase 1; BACE1 100.0 6.1E-38 2.1E-42 323.2 20.8 221 199-452 20-261 (395)
32 3lpj_A Beta-secretase 1; alzhe 100.0 5.6E-38 1.9E-42 329.6 20.7 222 199-452 73-314 (455)
33 3vf3_A Beta-secretase 1; struc 100.0 1.3E-37 4.3E-42 321.4 22.3 221 199-452 27-268 (402)
34 1wkr_A Polyporopepsin; hydrola 100.0 2.7E-37 9.4E-42 312.1 23.5 210 189-451 4-235 (340)
35 1lya_B Cathepsin D; lysosomal 99.9 1.3E-21 4.4E-26 187.9 13.4 138 306-451 1-149 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 6.9E-21 2.4E-25 158.9 8.5 89 188-302 3-95 (97)
37 1fmb_A EIAV protease; hydrolas 74.8 3 0.0001 34.3 4.2 27 202-230 9-35 (104)
38 2hs1_A HIV-1 protease; ultra-h 73.8 3.3 0.00011 33.8 4.1 27 203-231 10-36 (99)
39 2i1a_A DNA damage-inducible pr 72.9 3.2 0.00011 35.6 4.2 31 199-231 24-54 (148)
40 3liy_A Protease; hydrolase, hy 72.3 3.9 0.00013 34.2 4.3 29 203-231 12-43 (116)
41 2i1a_A DNA damage-inducible pr 67.4 6.3 0.00022 33.6 4.9 29 406-444 31-59 (148)
42 3ec0_A Protease; HIV-2, inhibi 64.4 6.5 0.00022 32.0 4.0 27 203-231 10-36 (99)
43 3s8i_A Protein DDI1 homolog 1; 63.1 7.1 0.00024 33.9 4.4 29 406-444 29-57 (148)
44 3s8i_A Protein DDI1 homolog 1; 59.3 7.7 0.00026 33.7 3.9 30 200-231 23-52 (148)
45 2hah_A Protease, retropepsin; 58.8 8.8 0.0003 32.1 4.0 24 206-231 18-41 (116)
46 3sqf_A Protease; folded monome 51.3 15 0.00053 30.6 4.2 27 203-231 11-37 (114)
47 1lya_A Cathepsin D; lysosomal 43.3 23 0.00078 28.1 4.0 16 424-439 29-44 (97)
48 3slz_A GAG-Pro-POL polyprotein 37.5 30 0.001 29.5 4.0 29 201-231 22-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 34.1 33 0.0011 31.4 4.0 27 202-230 9-35 (203)
50 2rsp_A RSV protease; hydrolase 34.0 30 0.001 29.2 3.4 19 213-231 30-48 (124)
51 1bxo_A Protein (penicillopepsi 29.9 50 0.0017 31.6 4.8 41 383-439 4-44 (323)
52 1izd_A Aspartic proteinase; su 27.2 60 0.002 31.1 4.8 41 383-439 4-44 (323)
53 1mpp_A Pepsin; hydrolase(acid 25.5 69 0.0024 31.1 5.0 44 382-439 4-49 (361)
54 1b5f_A Protein (cardosin A); h 23.3 70 0.0024 29.2 4.3 31 201-231 189-227 (239)
55 3cms_A Chymosin B; hydrolase, 21.8 65 0.0022 30.8 3.9 41 384-438 2-44 (323)
56 3vla_A EDGP; extracellular, in 21.8 87 0.003 31.4 4.9 44 384-438 7-50 (413)
57 1fmb_A EIAV protease; hydrolas 21.6 52 0.0018 26.7 2.6 34 399-442 6-39 (104)
58 1yg9_A Aspartic protease BLA G 20.9 73 0.0025 30.6 4.0 29 398-439 18-46 (330)
59 3slz_A GAG-Pro-POL polyprotein 20.4 89 0.0031 26.5 3.9 26 403-438 24-49 (132)
60 3aup_A SBG7S, BG, basic 7S glo 20.3 77 0.0026 31.4 4.1 40 387-439 11-52 (403)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.5e-44 Score=375.41 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=207.6
Q ss_pred CCceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccc
Q 012844 185 DSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQ 264 (455)
Q Consensus 185 ~s~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~ 264 (455)
.+.+.+||+++. .+++|+++|.||||||+|.|+|||||+++||+|. +| |..+..+.+.|.+..|....
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c----------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN----------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS----------CCCTTCEECBTTSHHHHHTT
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC----------CCCCCcCccCCCcccccccc
Confidence 467889999884 6899999999999999999999999999999998 66 23333345999999998654
Q ss_pred cCCCC--------CCCcCCCCceeeeec-CCCCeeeeEEEEEEEEEeecCCC-----ccccceEEEEEEccccccccccc
Q 012844 265 RNHKP--------GYCETCQQCDYEIEY-ADHSSSMGVLARDELHLTIENGS-----LTKPNVVFGCAYDQQGLLLNTLV 330 (455)
Q Consensus 265 ~~~~~--------~~C~~~~~c~~~i~Y-gdGs~~~G~l~~Dtv~l~~~~g~-----~~~~~~~FG~a~~~~g~~~~~~~ 330 (455)
.. .+ ..|. .+.|.|.+.| +||+.+.|++++|+|+|+..+|. ..++++.|||++.+..... ..
T Consensus 74 ~~-~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~--~~ 149 (413)
T 3vla_A 74 SI-ACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL--AS 149 (413)
T ss_dssp CC-EEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS--CT
T ss_pred cC-CCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc--cc
Confidence 32 11 1233 2579999999 58889999999999999866553 4678999999998632111 25
Q ss_pred ccceeeecCCCCCCchhHhhhcCCcceeEEEEecCCCCCCceEEeCCcCC-------CCCC-ceEEEccCCCC-------
Q 012844 331 KTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLV-------PSWG-MAWVPMLDSPF------- 395 (455)
Q Consensus 331 ~~dGILGLg~~~~S~~~qL~~~g~I~~vFS~~L~~~~~~~G~L~fGg~~~-------~~g~-l~~tPl~~~~~------- 395 (455)
..|||||||++.+|++.||.++++|+++||+||.+....+|+|+|||++. +.++ +.|+||+.++.
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 68999999999999999999999889999999998656789999999863 4677 99999997632
Q ss_pred ----CccEEEEEeEEEECCeeeecCcccC-----CCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 396 ----MELYHTEILKINYGSSPLNLGARNS-----QVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 396 ----~~~y~v~l~~Isvgg~~l~~~~~~~-----~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
..+|.|.|++|+||++.+.+++..+ ..+++||||||++++||+++|++|+++|.+++
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~ 295 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES 295 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh
Confidence 2699999999999999998764332 23689999999999999999999999999876
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.8e-43 Score=359.87 Aligned_cols=229 Identities=24% Similarity=0.399 Sum_probs=195.8
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccC
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRN 266 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~ 266 (455)
....||.+ |.|.+|+++|+||||||+|.|+|||||+++||+|. .|..|.|..++.|+|++|+|+. .
T Consensus 45 ~~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~SsT~~----------~- 110 (370)
T 3psg_A 45 IGDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSSTFE----------A- 110 (370)
T ss_dssp SCCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCTTCE----------E-
T ss_pred cceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCcCcE----------E-
Confidence 45567875 56889999999999999999999999999999999 9999888889999999999842 1
Q ss_pred CCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC---
Q 012844 267 HKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--- 343 (455)
Q Consensus 267 ~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~--- 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+.... ....|||||||++..
T Consensus 111 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~~~-~~~~dGIlGLg~~~~s~~ 175 (370)
T 3psg_A 111 ---------TSQELSITYGTGS-MTGILGYDTVQV----GGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISAS 175 (370)
T ss_dssp ---------EEEEEEEESSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGG-GCSCSEEEECSCGGGCGG
T ss_pred ---------CCcEEEEEeCCce-EEEEEEEEEEee----CCcccCCeEEEEEEeecccccc-cCCccceeccCCcccccc
Confidence 2689999999995 899999999999 6788999999999988664332 357899999999764
Q ss_pred ---CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCc
Q 012844 344 ---SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGA 417 (455)
Q Consensus 344 ---S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~ 417 (455)
+++++|+++|+| +++||+||.+....+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+...
T Consensus 176 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~~- 251 (370)
T 3psg_A 176 GATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE---GYWQITLDSITMDGETIACS- 251 (370)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE---TTEEEEECEEESSSSEEECT-
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc---ceeEEEEeEEEECCEEEecC-
Confidence 568899999999 999999999865678999999996 57899999999865 59999999999999877532
Q ss_pred ccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 418 RNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 418 ~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
..+.+||||||+++++|.++|++|.++|++.
T Consensus 252 ---~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (370)
T 3psg_A 252 ---GGCQAIVDTGTSLLTGPTSAIANIQSDIGAS 282 (370)
T ss_dssp ---TCEEEEECTTCCSEEEEHHHHHHHHHHTTCE
T ss_pred ---CCceEEEcCCCCcEECCHHHHHHHHHHhCCc
Confidence 2458999999999999999999999998764
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.9e-42 Score=345.91 Aligned_cols=219 Identities=25% Similarity=0.400 Sum_probs=190.0
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCC
Q 012844 198 PDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQ 277 (455)
Q Consensus 198 ~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~ 277 (455)
.+.+|+++|.||||+|++.|+|||||+++||+|. +|..| +..++.|+|++|+|+.. ..
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~SsT~~~--------------------~~ 70 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSSTYQA--------------------DG 70 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCTTCEE--------------------EE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCCCeee--------------------CC
Confidence 4779999999999999999999999999999999 89999 88889999999988321 26
Q ss_pred ceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC-------CchhHhh
Q 012844 278 CDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV-------SLPSQLA 350 (455)
Q Consensus 278 c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~-------S~~~qL~ 350 (455)
|.|.+.|++|+.+.|.+++|+|+| |+.+++++.|||++...+.|.. ...+||||||+... +++++|+
T Consensus 71 ~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f~~--~~~~GilGLg~~~~s~~~~~~~~~~~l~ 144 (325)
T 2apr_A 71 RTWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFAS--GPNDGLLGLGFDTITTVRGVKTPMDNLI 144 (325)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT--SSCSEEEECSCGGGCSSTTCCCHHHHHH
T ss_pred CEEEEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCccccc--CCCceEEEeCCcccccccCCCCHHHHHH
Confidence 899999999988999999999999 5678899999999987665543 45899999999764 4788999
Q ss_pred hcCCc-ceeEEEEecCC-CCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEE
Q 012844 351 SQGII-KNVVGHCLTTN-AGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWAL 426 (455)
Q Consensus 351 ~~g~I-~~vFS~~L~~~-~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aI 426 (455)
++|+| +++||+||.+. ....|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||+. +.. ....+|
T Consensus 145 ~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~vg~~-~~~-----~~~~~i 216 (325)
T 2apr_A 145 SQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR--GWWGITVDRATVGTS-TVA-----SSFDGI 216 (325)
T ss_dssp HTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT--SSCEEEECEEEETTE-EEE-----CCEEEE
T ss_pred hcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC--CEEEEEEeEEEECCE-ecC-----CCceEE
Confidence 99999 99999999753 3568999999996 578999999997544 699999999999993 321 235899
Q ss_pred EeccccCeeecHHHHHHHHHHHHhhh
Q 012844 427 FDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 427 iDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
|||||++++||+++|++++++|.+.+
T Consensus 217 iDSGTs~~~lP~~~~~~~~~~~~~~~ 242 (325)
T 2apr_A 217 LDTGTTLLILPNNIAASVARAYGASD 242 (325)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHHTCEE
T ss_pred EecCCccEECCHHHHHHHHHHHhccc
Confidence 99999999999999999999998764
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-42 Score=334.22 Aligned_cols=224 Identities=23% Similarity=0.332 Sum_probs=189.7
Q ss_pred eeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCccccCCCcccccccc
Q 012844 189 IFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS---SCAKGANPLYKPRMGNILPYKDSLCMEIQR 265 (455)
Q Consensus 189 ~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~---~C~~~~~~~ydps~Sstv~C~~~~C~~~~~ 265 (455)
.+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+|+. .
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~--~~~~y~~~~SsT~~----------~ 68 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACR--AHSMYESSDSSTYK----------E 68 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHH--TSCCBCGGGCTTCE----------E
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccC--CCCCCCCccCCCee----------e
Confidence 467775 45789999999999999999999999999999998 896 454 46789999998732 1
Q ss_pred CCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEccccc-ccccccccceeeecCCCCCC
Q 012844 266 NHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGL-LLNTLVKTDGILGLSRAKVS 344 (455)
Q Consensus 266 ~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~-~~~~~~~~dGILGLg~~~~S 344 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+. |. ....+||||||+...+
T Consensus 69 ----------~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~f~--~~~~~GilGLg~~~~s 131 (239)
T 1b5f_A 69 ----------NGTFGAIIYGTGS-ITGFFSQDSVTI----GDLVVKEQDFIEATDEADNVFL--HRLFDGILGLSFQTIS 131 (239)
T ss_dssp ----------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT--TCSCCEEEECSCCSSS
T ss_pred ----------CCcEEEEEECCCc-EEEEEEEEEEEE----CCcEEccEEEEEEEeccCcccc--ccCcceEEecCccccc
Confidence 2678999999995 899999999999 5678899999999886553 22 2568999999999876
Q ss_pred --chhHhhhcCCc-ceeEEEEecCC--CCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCc
Q 012844 345 --LPSQLASQGII-KNVVGHCLTTN--AGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGA 417 (455)
Q Consensus 345 --~~~qL~~~g~I-~~vFS~~L~~~--~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~ 417 (455)
++.+|+++|+| +++||+||.+. ....|.|+|||++ ++.|++.|+|+... .+|.|.|++|+|+++.+.+..
T Consensus 132 ~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~ 208 (239)
T 1b5f_A 132 VPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ---YYWQFGIGDVLIGDKSTGFCA 208 (239)
T ss_dssp CCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE---TTEEEEECCEEETTEECCTTT
T ss_pred cHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC---CeEEEEeeEEEECCEEecccC
Confidence 55789999999 89999999974 3468999999996 46789999999864 599999999999999876532
Q ss_pred ccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 418 RNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 418 ~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
....+||||||++++||+++|++|.++|++
T Consensus 209 ---~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 ---PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp ---TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred ---CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 235899999999999999999999999875
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=345.12 Aligned_cols=229 Identities=23% Similarity=0.384 Sum_probs=192.5
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccC
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRN 266 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~ 266 (455)
.+.+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|..+.|..++.|+|++|+|+. .
T Consensus 12 ~~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~- 77 (351)
T 1tzs_A 12 SAKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACKTHSRFQPSQSSTYS----------Q- 77 (351)
T ss_dssp --CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCTTCB----------C-
T ss_pred ccceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccCCCCcCCcccCcceE----------E-
Confidence 34567875 45789999999999999999999999999999999 8986555667899999998832 1
Q ss_pred CCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC---
Q 012844 267 HKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--- 343 (455)
Q Consensus 267 ~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~--- 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+.... ....+||||||++..
T Consensus 78 ---------~~~~~~i~Yg~Gs-~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 78 ---------PGQSFSIQYGTGS-LSGIIGADQVSV----EGLTVVGQQFGESVTEPGQTFV-DAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp ---------CSCEEEEESSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGG-GCSCSEEEECSCGGGSGG
T ss_pred ---------CCCEEEEEeCCCC-eEEEEEEeEEEE----CCeEECCeEEEEEEeccccccc-cCCCceEEecCCcccccc
Confidence 3789999999995 899999999999 5678899999999987654321 356899999999864
Q ss_pred ---CchhHhhhcCCc-ceeEEEEecCCCCC--CceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeec
Q 012844 344 ---SLPSQLASQGII-KNVVGHCLTTNAGG--GGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNL 415 (455)
Q Consensus 344 ---S~~~qL~~~g~I-~~vFS~~L~~~~~~--~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~ 415 (455)
+++++|+++|+| +++||+||.+.... +|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+..
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~ 219 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ---AYWQIALDNIQVGGTVMFC 219 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE---TTEEEEEEEEEETTEEEEC
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC---ceEEEEeCEEEECCceEEc
Confidence 467899999999 89999999976433 8999999996 57899999999864 6999999999999987642
Q ss_pred CcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 416 GARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 416 ~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
. ....+||||||++++||+++|++|.++|++.
T Consensus 220 ~----~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~ 251 (351)
T 1tzs_A 220 S----EGCQAIVDTGTSLITGPSDKIKQLQNAIGAA 251 (351)
T ss_dssp T----TCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred C----CCceEEeccCCcceeCCHHHHHHHHHHhCCc
Confidence 1 2358999999999999999999999998753
No 6
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=350.31 Aligned_cols=225 Identities=22% Similarity=0.444 Sum_probs=190.5
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCccccCCCccccc
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS----SCAKGANPLYKPRMGNILPYKDSLCME 262 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~----~C~~~~~~~ydps~Sstv~C~~~~C~~ 262 (455)
....||.+ +.+.+|+++|+||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|+|+.
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~SsT~~-------- 116 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSSSYK-------- 116 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCTTCE--------
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCCcEE--------
Confidence 34578885 56889999999999999999999999999999999 896 465 46889999998832
Q ss_pred cccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCC
Q 012844 263 IQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAK 342 (455)
Q Consensus 263 ~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~ 342 (455)
. ++|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++...+.... ....|||||||++.
T Consensus 117 --~----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~~f~-~~~~dGIlGLg~~~ 177 (383)
T 2x0b_A 117 --H----------NGTELTLRYSTGT-VSGFLSQDIITV----GGITVT-QMFGEVTEMPALPFM-LAEFDGVVGMGFIE 177 (383)
T ss_dssp --E----------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEE-EEEEEEEECCHHHHT-TCSSSEEEECSCGG
T ss_pred --E----------CCcEEEEEcCCcc-EEEEEEeeEEEE----cCceEE-EEEEEEEecCCcccc-cCCCceEeccCCCc
Confidence 1 3789999999994 899999999999 567788 999999987664321 35789999999986
Q ss_pred CC------chhHhhhcCCc-ceeEEEEecCCCCC----CceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEEC
Q 012844 343 VS------LPSQLASQGII-KNVVGHCLTTNAGG----GGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYG 409 (455)
Q Consensus 343 ~S------~~~qL~~~g~I-~~vFS~~L~~~~~~----~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvg 409 (455)
.+ ++++|++||+| +++||+||.+.... +|+|+|||++ ++.|++.|+|+... .+|.|.|++|+||
T Consensus 178 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~---~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 178 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---GVWQIQMKGVSVG 254 (383)
T ss_dssp GCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST---TSCEEEECEEEES
T ss_pred cccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC---ceEEEEEeEEEeC
Confidence 54 67899999999 99999999976433 8999999996 46799999999865 6999999999999
Q ss_pred CeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 410 SSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 410 g~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
++.+.. ...+.+||||||+++++|+++|++|.++|++
T Consensus 255 ~~~~~~----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 291 (383)
T 2x0b_A 255 SSTLLC----EDGCLALVDTGASYISGSTSSIEKLMEALGA 291 (383)
T ss_dssp SCCCBS----TTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CceEEc----CCCcEEEEcCCCceEEcCHHHHHHHHHHhCC
Confidence 986532 1245899999999999999999999999975
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=8.3e-42 Score=342.01 Aligned_cols=225 Identities=22% Similarity=0.389 Sum_probs=190.8
Q ss_pred eeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCC
Q 012844 190 FPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKP 269 (455)
Q Consensus 190 ~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~ 269 (455)
.||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|.|..++.|+|++|+|+. .
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~---- 65 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSSTFR----------N---- 65 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCTTCE----------E----
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCcCeE----------c----
Confidence 35664 45889999999999999999999999999999999 8997777778999999998832 1
Q ss_pred CCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCC------C
Q 012844 270 GYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAK------V 343 (455)
Q Consensus 270 ~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~------~ 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+.+++++.|||++...+.... ....+||||||++. .
T Consensus 66 ------~~~~~~i~Yg~gs-~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~~~ 133 (320)
T 4aa9_A 66 ------LGKPLSIHYGTGS-MEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGEVFT-YSEFDGILGLAYPSLASEYSV 133 (320)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHH-SCCCSEEEECSCGGGSCTTCC
T ss_pred ------CCcEEEEEECCcE-EEEEEEEEEEEE----CCEeecCeEEEEEEEccccccc-ccCcccEEecCcccccccCCC
Confidence 2689999999995 899999999999 5678999999999987663221 35679999999875 3
Q ss_pred CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccC
Q 012844 344 SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNS 420 (455)
Q Consensus 344 S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~ 420 (455)
+++++|+++|+| +++||+||.+. ...|.|+|||++ ++.|++.|+|+... .+|.|.+++|+++++.+..+
T Consensus 134 ~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~---- 205 (320)
T 4aa9_A 134 PVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQ---QYWQFTVDSVTINGVAVACV---- 205 (320)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSB---TTBEEEECEEEETTEEEEST----
T ss_pred CHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccC---CceEEEEeEEEECCEEeccC----
Confidence 578899999999 99999999975 678999999996 46799999999864 69999999999999887642
Q ss_pred CCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 421 QVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 421 ~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
....+||||||++++||+++|++|.++|++.
T Consensus 206 ~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 206 GGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp TCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2358999999999999999999999998653
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-41 Score=341.15 Aligned_cols=227 Identities=21% Similarity=0.385 Sum_probs=192.7
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
+.+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. .|..+.|..++.|+|++|+|+. .
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~-- 66 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACSNHNKFKPRQSSTYV----------E-- 66 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHHTSCCBCGGGCTTCE----------E--
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCcccccCCCcCCCccCCCeE----------e--
Confidence 3467775 45789999999999999999999999999999998 8986445567899999998732 1
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC----
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV---- 343 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~---- 343 (455)
..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||++...+.+.. ....+||||||++..
T Consensus 67 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~ 132 (324)
T 1am5_A 67 --------TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGPFQA-AAPFDGILGLAYPSIAAAG 132 (324)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCSTTTT-TCSSSEEEECSCGGGCGGG
T ss_pred --------CCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEeccccccc-CCCCceEEecCCccccccC
Confidence 268999999999 4599999999999 5678899999999987664321 357899999999764
Q ss_pred --CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcc
Q 012844 344 --SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGAR 418 (455)
Q Consensus 344 --S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~ 418 (455)
+++++|+++|+| +++||+||.+....+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+...
T Consensus 133 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~-- 207 (324)
T 1am5_A 133 AVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE---KYWQVALDGITVNGQTAACE-- 207 (324)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE---TTEEEEECEEEETTEECCCC--
T ss_pred CCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC---cEEEEEEeEEEECCceeecc--
Confidence 478899999999 999999999865568999999996 57799999999864 59999999999999875321
Q ss_pred cCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 419 NSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 419 ~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
. ..+||||||++++||+++|++|.+++.+.
T Consensus 208 --~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 208 --G-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp --C-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred --C-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2 68999999999999999999999998753
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.8e-41 Score=340.68 Aligned_cols=227 Identities=19% Similarity=0.341 Sum_probs=190.8
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
...||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|..+.|..++.|+|++|+|+. .
T Consensus 4 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~-- 68 (323)
T 3cms_A 4 ASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACKNHQRFDPRKSSTFQ----------N-- 68 (323)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCTTCE----------E--
T ss_pred ceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCcccccCCCCCCCccCCCeE----------E--
Confidence 3467775 45789999999999999999999999999999999 8954344457889999998832 1
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC----
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV---- 343 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~---- 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+.+++++.|||++...+.... ....+||||||++..
T Consensus 69 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 69 --------LGKPLSIHYGTGS-MQGILGYDTVTV----SNIVDIQQTVGLSTQEPGDFFT-YAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHH-HSSCSEEEECSCGGGSCTT
T ss_pred --------CCcEEEEEeCCCC-eEEEEEEEEEEE----CCeEEeccEEEEEEeccccccc-ccCCceEEecCcchhhccC
Confidence 2789999999995 899999999999 5678899999999987653221 246899999999754
Q ss_pred --CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcc
Q 012844 344 --SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGAR 418 (455)
Q Consensus 344 --S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~ 418 (455)
+++++|+++|+| +++||+||.+... .|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+.++
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~-- 208 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTVQ---QYWQFTVDSVTISGVVVACE-- 208 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEEST--
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECccC---CeEEEEEeeEEECCEEeecC--
Confidence 578899999999 9999999997533 3999999996 46789999999865 59999999999999887642
Q ss_pred cCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 419 NSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 419 ~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
....+||||||++++||+++|++|.+++.+.
T Consensus 209 --~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 239 (323)
T 3cms_A 209 --GGCQAILDTGTSKLVGPSSDILNIQQAIGAT 239 (323)
T ss_dssp --TCEEEEECTTCCSEEECHHHHHHHHHHHTCE
T ss_pred --CCcEEEEecCCccEeCCHHHHHHHHHHhCCe
Confidence 2358999999999999999999999998753
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.7e-41 Score=341.75 Aligned_cols=233 Identities=20% Similarity=0.289 Sum_probs=194.8
Q ss_pred CCceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC-CCCCCCCCCCCCCCCccccCCCcccccc
Q 012844 185 DSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS-SCAKGANPLYKPRMGNILPYKDSLCMEI 263 (455)
Q Consensus 185 ~s~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~-~C~~~~~~~ydps~Sstv~C~~~~C~~~ 263 (455)
++...+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. +|. .+.|..++.|+|++|+|+.
T Consensus 5 g~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~~~~~y~~~~SsT~~--------- 72 (361)
T 1mpp_A 5 GSVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVGKRFFDPSSSSTFK--------- 72 (361)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCSSCCBCGGGCTTCE---------
T ss_pred CccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCCCCCcCCCccCCceE---------
Confidence 5566789986 45789999999999999999999999999999999 898 3333457889999998832
Q ss_pred ccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccc-----cccccccccceeeec
Q 012844 264 QRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQG-----LLLNTLVKTDGILGL 338 (455)
Q Consensus 264 ~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g-----~~~~~~~~~dGILGL 338 (455)
. ..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+ .+.. ....+|||||
T Consensus 73 -~----------~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~-~~~~~GilGL 135 (361)
T 1mpp_A 73 -E----------TDYNLNITYGTGG-ANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDS-ELFLDGIFGA 135 (361)
T ss_dssp -E----------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTC-SSCCCEEEEC
T ss_pred -e----------cCCeEEEEECCce-EEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccc-cCCCCCEEEe
Confidence 1 2689999999995 899999999999 567899999999998765 2221 3568999999
Q ss_pred CCCC------------CCchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCC-CccEEEE
Q 012844 339 SRAK------------VSLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPF-MELYHTE 402 (455)
Q Consensus 339 g~~~------------~S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~-~~~y~v~ 402 (455)
|++. .+++++|+++|+| +++||+||.+. ...|.|+|||++ ++.|++.|+|+..... ..+|.|.
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~ 214 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 214 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEE
Confidence 9874 3467799999999 89999999975 568999999996 5789999999987541 1289999
Q ss_pred EeEEEECCeeeecCcccCCCccEE-EeccccCeeecHHHHHHHHHHHHhh
Q 012844 403 ILKINYGSSPLNLGARNSQVGWAL-FDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 403 l~~Isvgg~~l~~~~~~~~~~~aI-iDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
|++|+|+++.+... ....+| |||||++++||+++|++|.++|.+.
T Consensus 215 l~~i~v~~~~~~~~----~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~ 260 (361)
T 1mpp_A 215 VTGVKIDGSDAVSF----DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPD 260 (361)
T ss_dssp EEEEEETTEEEEEE----EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTT
T ss_pred EeEEEECCeeeccC----CCCEEEEECCCCCceeCCHHHHHHHHHHhCCc
Confidence 99999999877532 134899 9999999999999999999999864
No 11
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8.3e-41 Score=345.81 Aligned_cols=251 Identities=19% Similarity=0.327 Sum_probs=196.8
Q ss_pred CceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCcccccccc
Q 012844 186 SSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQR 265 (455)
Q Consensus 186 s~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~ 265 (455)
+.+.+||+++ +.+++|+++|.||||||+|.|+|||||+++||+|. +| |..+..+.+.|.+..|.....
T Consensus 8 ~~~~~pl~~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~----------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 8 NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ----------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp CCEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC----------CCCSSCBCCCTTBHHHHHTTC
T ss_pred ccEEEeeecC-CCCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC----------CCCCCCCccCCCCccccCccc
Confidence 5577899965 36889999999999999999999999999999998 55 333333457999989986543
Q ss_pred CC-------CCCCCcCCCCceeeeecC-CCCeeeeEEEEEEEEEeecCCC-------ccccceEEEEEEccccc-ccccc
Q 012844 266 NH-------KPGYCETCQQCDYEIEYA-DHSSSMGVLARDELHLTIENGS-------LTKPNVVFGCAYDQQGL-LLNTL 329 (455)
Q Consensus 266 ~~-------~~~~C~~~~~c~~~i~Yg-dGs~~~G~l~~Dtv~l~~~~g~-------~~~~~~~FG~a~~~~g~-~~~~~ 329 (455)
.. ....|.+ +.|.|.+.|+ ||+.+.|.+++|+|+|+..+|. ..++++.|||++..... +. .
T Consensus 76 ~~c~~c~~~~~s~~~~-~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~--~ 152 (403)
T 3aup_A 76 HQCLSCPAASRPGCHK-NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL--P 152 (403)
T ss_dssp CCEEECSSSCBTTBCS-SEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSS--S
T ss_pred cCccccCCCCCCCCCC-CcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCC--C
Confidence 20 0123432 5899999998 7889999999999999764443 57889999999986433 22 2
Q ss_pred cccceeeecCCCCCCchhHhhhcCCcceeEEEEecCCCCCCceEEeCCcC-CC--C-C-----CceEEEccCCCCCccEE
Q 012844 330 VKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDL-VP--S-W-----GMAWVPMLDSPFMELYH 400 (455)
Q Consensus 330 ~~~dGILGLg~~~~S~~~qL~~~g~I~~vFS~~L~~~~~~~G~L~fGg~~-~~--~-g-----~l~~tPl~~~~~~~~y~ 400 (455)
...+||||||++.++++.||++..+.+++||+||.+....+|.|+|||.. ++ . | ++.|+||+.++. .+|.
T Consensus 153 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~-~~y~ 231 (403)
T 3aup_A 153 RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQ-GEYN 231 (403)
T ss_dssp TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTT-SCEE
T ss_pred CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCC-Ccce
Confidence 56899999999999999999765444899999999765678999999931 34 3 4 999999987632 5999
Q ss_pred EEEeEEEECCeee-ecCcccC-----CCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 401 TEILKINYGSSPL-NLGARNS-----QVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 401 v~l~~Isvgg~~l-~~~~~~~-----~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
|.|++|+||++.+ .++.... ....+||||||++++||+++|++|+++|.+++
T Consensus 232 v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~ 289 (403)
T 3aup_A 232 VRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL 289 (403)
T ss_dssp ECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS
T ss_pred EEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh
Confidence 9999999999988 6543222 13469999999999999999999999997654
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.4e-41 Score=338.97 Aligned_cols=222 Identities=21% Similarity=0.338 Sum_probs=190.0
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCC-CCCCC-------CCCCCCCCCCCCCccccCCCc
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDA-PCSSC-------AKGANPLYKPRMGNILPYKDS 258 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~-~C~~C-------~~~~~~~ydps~Sstv~C~~~ 258 (455)
.+.+||.+ .+..|+++|.||||+|++.|+|||||+++||+|.. +|..| .|..++.|+|++|+|+.
T Consensus 2 ~v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~---- 74 (342)
T 2qzx_A 2 PVAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQ---- 74 (342)
T ss_dssp CEEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCE----
T ss_pred ceeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcc----
Confidence 46778875 36799999999999999999999999999998541 46543 34567899999998732
Q ss_pred cccccccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeec
Q 012844 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGL 338 (455)
Q Consensus 259 ~C~~~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGL 338 (455)
. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++... ..+|||||
T Consensus 75 ------~----------~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~--------~~~GilGL 126 (342)
T 2qzx_A 75 ------N----------LNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWSTS--------ARKGILGI 126 (342)
T ss_dssp ------E----------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEEC--------SSSCEEEC
T ss_pred ------c----------CCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEecC--------CCcCEEEE
Confidence 1 26899999999988999999999999 56788999999998752 47999999
Q ss_pred CCCCC--------CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEE
Q 012844 339 SRAKV--------SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKIN 407 (455)
Q Consensus 339 g~~~~--------S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Is 407 (455)
|+... +++.+|+++|+| +++||+||.+....+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~ 203 (342)
T 2qzx_A 127 GFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE---KKLTVGLRSVN 203 (342)
T ss_dssp SCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS---SSCEEEEEEEE
T ss_pred ccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC---ceEEEEEeEEE
Confidence 99754 788999999999 899999999765678999999995 57899999999876 48999999999
Q ss_pred ECCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 408 YGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 408 vgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
||++.+... ..+||||||++++||+++|++|.++|.+..
T Consensus 204 v~g~~~~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (342)
T 2qzx_A 204 VRGRNVDAN------TNVLLDSGTTISYFTRSIVRNILYAIGAQM 242 (342)
T ss_dssp ETTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred ECCEecCCC------cCEEEeCCCCCEEcCHHHHHHHHHHhCCee
Confidence 999887642 479999999999999999999999998754
No 13
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.7e-41 Score=339.86 Aligned_cols=221 Identities=21% Similarity=0.336 Sum_probs=189.9
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCC-CCCCC-------CCCCCCCCCCCCCccccCCCc
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDA-PCSSC-------AKGANPLYKPRMGNILPYKDS 258 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~-~C~~C-------~~~~~~~ydps~Sstv~C~~~ 258 (455)
.+.+||.+. +.+|+++|.||||||++.|+|||||+++||+|.. +|..| .|..++.|+|++|+|+.
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~---- 74 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQ---- 74 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCE----
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcc----
Confidence 467888863 6799999999999999999999999999998641 46544 34567899999998732
Q ss_pred cccccccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeec
Q 012844 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGL 338 (455)
Q Consensus 259 ~C~~~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGL 338 (455)
. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++... ..+|||||
T Consensus 75 ------~----------~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~--------~~~GilGL 126 (334)
T 1j71_A 75 ------N----------LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTTS--------VDQGIMGI 126 (334)
T ss_dssp ------E----------EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES--------SSSCEEEC
T ss_pred ------c----------CCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEecC--------CCccEEEE
Confidence 1 27899999999988999999999999 56788999999998752 47999999
Q ss_pred CCCCC--------CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEE
Q 012844 339 SRAKV--------SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKIN 407 (455)
Q Consensus 339 g~~~~--------S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Is 407 (455)
|+... +++.+|+++|+| +++||+||.+.....|.|+|||++ ++.|++.|+|+... .+|.|.|++|+
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~ 203 (334)
T 1j71_A 127 GFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS---VELRVHLGSIN 203 (334)
T ss_dssp SCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS---SSCEEEEEEEE
T ss_pred cCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC---CeEEEEEeEEE
Confidence 99764 788999999999 899999999765678999999995 46789999999876 48999999999
Q ss_pred ECCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 408 YGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 408 vgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
||++.+..+ ..+||||||++++||+++|++|.++|.+.
T Consensus 204 v~g~~~~~~------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~ 241 (334)
T 1j71_A 204 FDGTSVSTN------ADVVLDSGTTITYFSQSTADKFARIVGAT 241 (334)
T ss_dssp ETTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred ECCEeccCC------ccEEEeCCCCcEecCHHHHHHHHHHcCCc
Confidence 999887542 47999999999999999999999999864
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4.6e-41 Score=338.32 Aligned_cols=224 Identities=24% Similarity=0.386 Sum_probs=191.6
Q ss_pred eeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCC
Q 012844 189 IFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHK 268 (455)
Q Consensus 189 ~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~ 268 (455)
.+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|..|.|..++.|+|++|+|+. .
T Consensus 4 ~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~--- 67 (329)
T 1dpj_A 4 DVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFLHSKYDHEASSSYK----------A--- 67 (329)
T ss_dssp EEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCTTCE----------E---
T ss_pred ceeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccCCcCcCCcccCcCeE----------E---
Confidence 467765 35789999999999999999999999999999999 8998666667899999998832 1
Q ss_pred CCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccc-cccccccccceeeecCCCCCC---
Q 012844 269 PGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQG-LLLNTLVKTDGILGLSRAKVS--- 344 (455)
Q Consensus 269 ~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g-~~~~~~~~~dGILGLg~~~~S--- 344 (455)
+.|.|.+.|++| .+.|.+++|+|+| |+.+++++.|||++...+ .+. ....+||||||+...+
T Consensus 68 -------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~f~--~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 68 -------NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGLTFA--FGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp -------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHHHHT--TCSCSEEEECSCGGGCGGG
T ss_pred -------CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCccccc--cCCcceEEEeCCchhhccC
Confidence 278999999999 7999999999999 567889999999998766 232 2568999999998754
Q ss_pred ---chhHhhhcCCc-ceeEEEEecCCC---CCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeec
Q 012844 345 ---LPSQLASQGII-KNVVGHCLTTNA---GGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNL 415 (455)
Q Consensus 345 ---~~~qL~~~g~I-~~vFS~~L~~~~---~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~ 415 (455)
++.+|+++|+| +++||+||.+.. ..+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+|+++.+..
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~ 210 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK---AYWEVKFEGIGLGDEYAEL 210 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEEC
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC---ceEEEEeeeEEECCeEecC
Confidence 46789999999 899999998642 347999999996 46799999999864 5999999999999988753
Q ss_pred CcccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 416 GARNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 416 ~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
....+||||||++++||+++|++|.++|++
T Consensus 211 -----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 240 (329)
T 1dpj_A 211 -----ESHGAAIDTGTSLITLPSGLAEMINAEIGA 240 (329)
T ss_dssp -----SSCEEEECTTCSCEEECHHHHHHHHHHHTC
T ss_pred -----CCccEEeeCCCCcEECCHHHHHHHHHHhCC
Confidence 235899999999999999999999999875
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.2e-41 Score=339.47 Aligned_cols=226 Identities=23% Similarity=0.411 Sum_probs=190.8
Q ss_pred eeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCC
Q 012844 190 FPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKP 269 (455)
Q Consensus 190 ~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~ 269 (455)
+||+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|..+.|..++.|+|++|+|+. .
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~---- 66 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACTSHSRFNPSESSTYS----------T---- 66 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCTTCE----------E----
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccCCCCcCCCccCCCeE----------E----
Confidence 5666 45789999999999999999999999999999999 8986444557899999998732 1
Q ss_pred CCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC------
Q 012844 270 GYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV------ 343 (455)
Q Consensus 270 ~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~------ 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+.... ....+||||||+...
T Consensus 67 ------~~~~~~i~Yg~gs-~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~~~ 134 (329)
T 1htr_B 67 ------NGQTFSLQYGSGS-LTGFFGYDTLTV----QSIQVPNQEFGLSENEPGTNFV-YAQFDGIMGLAYPALSVDEAT 134 (329)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEEEEEEEESSCSSGGGG-GCSCCEEEECCCCSCCCTTCC
T ss_pred ------CCcEEEEEeCCCC-eEEEEEeeeEEE----cceEECceEEEEEEEccccccc-cCCCceEEecCCCcccccCCC
Confidence 2689999999995 699999999999 5678899999999987664321 357899999999864
Q ss_pred CchhHhhhcCCc-ceeEEEEecCCCCC-CceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCccc
Q 012844 344 SLPSQLASQGII-KNVVGHCLTTNAGG-GGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARN 419 (455)
Q Consensus 344 S~~~qL~~~g~I-~~vFS~~L~~~~~~-~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~ 419 (455)
+++++|+++|+| +++||+||.+.... +|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+...
T Consensus 135 ~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~--- 208 (329)
T 1htr_B 135 TAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE---LYWQIGIEEFLIGGQASGWC--- 208 (329)
T ss_dssp SHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS---SSCEEEECEEEETTEECCTT---
T ss_pred CHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC---ceEEEEEeEEEECCceeeec---
Confidence 468899999999 99999999976444 8999999996 46789999999864 69999999999999876421
Q ss_pred CCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 420 SQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 420 ~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
.....+||||||++++||+++|++|.+++.+.
T Consensus 209 ~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 209 SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 12358999999999999999999999999764
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.3e-41 Score=338.21 Aligned_cols=218 Identities=21% Similarity=0.288 Sum_probs=186.7
Q ss_pred CCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCC
Q 012844 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQ 276 (455)
Q Consensus 197 ~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~ 276 (455)
+.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|.|..++.|+|++|+|+. . -+
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~SsT~~----------~---------~~ 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSSTSK----------K---------VS 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCTTCE----------E---------CT
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCcCce----------E---------cC
Confidence 35779999999999999999999999999999999 8999998889999999998732 1 02
Q ss_pred CceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCCC---------chh
Q 012844 277 QCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS---------LPS 347 (455)
Q Consensus 277 ~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S---------~~~ 347 (455)
.|.|.+.|++|+.+.|.+++|+|+| |+.+++++.|||++...+.+.. ....+||||||+...+ +++
T Consensus 72 ~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~~~~~~ 146 (329)
T 3c9x_A 72 GASWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEFVQ-DTVISGLVGLAFDSGNQVRPHPQKTWFS 146 (329)
T ss_dssp TCBEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHH-CTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred CCeEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCccccc-cCCCceeEEeCcccccccCCCCCCCHHH
Confidence 6889999999988999999999999 5678899999999987665432 2468999999997543 567
Q ss_pred HhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCcc
Q 012844 348 QLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGW 424 (455)
Q Consensus 348 qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~ 424 (455)
+|+++ | +++||+||.+ ..+|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||++.+.. ....
T Consensus 147 ~l~~~--i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~v~~~~~~~-----~~~~ 215 (329)
T 3c9x_A 147 NAASS--LAEPLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDNSQ--GFWEFTASGYSVGGGKLNR-----NSID 215 (329)
T ss_dssp HHHTT--SSSSEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBCTT--SSCEEEECCEEETTCCCCS-----CCEE
T ss_pred HHHHh--cCCCEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccCCC--ceEEEEEeeEEECCEeccC-----CCce
Confidence 88876 6 8999999985 468999999996 578999999998544 6999999999999986531 2358
Q ss_pred EEEeccccCeeecHHHHHHHHHHHHh
Q 012844 425 ALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 425 aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
+||||||++++||+++|++|.++|..
T Consensus 216 aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 216 GIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred EEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 99999999999999999999998843
No 17
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.9e-41 Score=354.32 Aligned_cols=222 Identities=17% Similarity=0.318 Sum_probs=189.0
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
..+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. +|..|.|..++.|+|++|+|+. .
T Consensus 128 ~~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~~~~~ydps~SsT~~----------~-- 192 (453)
T 2bju_A 128 DNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCLTKHLYDSSKSRTYE----------K-- 192 (453)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGGGSCCBCGGGCTTCE----------E--
T ss_pred CceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccCCCCcCCCccCCcee----------E--
Confidence 4578874 35789999999999999999999999999999999 8987677778899999998832 1
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEccc--ccccccccccceeeecCCCCC--
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQ--GLLLNTLVKTDGILGLSRAKV-- 343 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~--g~~~~~~~~~dGILGLg~~~~-- 343 (455)
.+|.|.+.|++|+ +.|.+++|+|+| |+.+++ +.|||++... +.... ....+||||||++..
T Consensus 193 --------~~~~~~i~YgdGs-~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~~~g~~f~-~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 193 --------DGTKVEMNYVSGT-VSGFFSKDLVTV----GNLSLP-YKFIEVIDTNGFEPTYT-ASTFDGILGLGWKDLSI 257 (453)
T ss_dssp --------EEEEEEEECSSSE-EEEEEEEEEEEE----TTEEEE-EEEEEEEECGGGTTHHH-HSSCCEEEECSCGGGST
T ss_pred --------CCcEEEEEcCCCC-eEEEEEEEEEEE----eCcEEE-EEEEEEEEecccCcccc-ccCCceeEeccCCcccc
Confidence 2689999999995 899999999999 567788 9999999876 43221 256899999999754
Q ss_pred ----CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecC
Q 012844 344 ----SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLG 416 (455)
Q Consensus 344 ----S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~ 416 (455)
+++++|++||+| +++||+||.+.+..+|.|+|||++ ++.|++.|+|+... .+|.|.|+ |+||++ + +
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~---~~w~V~l~-I~Vgg~-~-~- 330 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD---LYWQITLD-AHVGNI-M-L- 330 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE---TTEEEEEE-EEETTE-E-E-
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC---ceEEEEEE-EEECcE-E-e-
Confidence 467899999999 899999999865568999999996 46799999999764 69999999 999993 3 2
Q ss_pred cccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 417 ARNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 417 ~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
....+||||||++++||+++|++|.+++.+
T Consensus 331 ----~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~ 360 (453)
T 2bju_A 331 ----EKANCIVDSGTSAITVPTDFLNKMLQNLDV 360 (453)
T ss_dssp ----EEEEEEECTTCCSEEECHHHHHHHTTTSSC
T ss_pred ----ccccEEEcCCCCeEecCHHHHHHHHHHhCC
Confidence 235899999999999999999999988765
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.4e-40 Score=335.74 Aligned_cols=219 Identities=21% Similarity=0.337 Sum_probs=189.5
Q ss_pred ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCccccCCCcccc
Q 012844 187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQ-----CDAPCSSCAKGANPLYKPRMGNILPYKDSLCM 261 (455)
Q Consensus 187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~-----~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~ 261 (455)
.+.+||... ++.|+++|.||||||++.|+|||||+++||+ |. +|..|. .++.|+|++|+|+.
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~SsT~~------- 68 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSSSYK------- 68 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCTTCE-------
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCccee-------
Confidence 367888853 5689999999999999999999999999998 54 455555 57899999999832
Q ss_pred ccccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCC
Q 012844 262 EIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRA 341 (455)
Q Consensus 262 ~~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~ 341 (455)
. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++... ..+||||||+.
T Consensus 69 ---~----------~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~--------~~~GilGLg~~ 123 (339)
T 3fv3_A 69 ---N----------LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQTS--------VDQGILGIGYT 123 (339)
T ss_dssp ---E----------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES--------SSSCEEECSCG
T ss_pred ---e----------CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEecC--------CCceeEEecCc
Confidence 1 26899999999999999999999999 57789999999998753 25999999997
Q ss_pred CCC----------------chhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEE
Q 012844 342 KVS----------------LPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTE 402 (455)
Q Consensus 342 ~~S----------------~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~ 402 (455)
..+ ++.+|+++|+| +++||+||.+.....|.|+|||++ ++.|++.|+|+... .+|.|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~ 200 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS---QALTIS 200 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS---SSCEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC---ccEEEE
Confidence 643 78999999999 899999999766678999999985 57899999999876 489999
Q ss_pred EeEEEECCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 403 ILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 403 l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
|++|+++++.+... ..+||||||++++||+++|++|.++|.+..
T Consensus 201 l~~i~v~g~~~~~~------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 244 (339)
T 3fv3_A 201 LASVNLKGSSFSFG------DGALLDSGTTLTYFPSDFAAQLADKAGARL 244 (339)
T ss_dssp EEEEEESSCEEEEE------EEEEECTTBSSEEECHHHHHHHHHHHTCEE
T ss_pred EEEEEECCEeecCC------ccEEEeCCCCCEecCHHHHHHHHHHcCCEE
Confidence 99999999887642 479999999999999999999999998653
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-40 Score=335.74 Aligned_cols=216 Identities=21% Similarity=0.279 Sum_probs=184.2
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCC
Q 012844 198 PDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQ 277 (455)
Q Consensus 198 ~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~ 277 (455)
.+++|+++|.||||+|++.|+|||||+++||+|. +|..|.| .++.|+|++|+|+. .. +.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~SsT~~-------~~------------~~ 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKSTTAK-------LL------------SG 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCTTCE-------EE------------EE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCccce-------ec------------CC
Confidence 4679999999999999999999999999999999 8999988 78899999998832 11 25
Q ss_pred ceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCCC---------chhH
Q 012844 278 CDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS---------LPSQ 348 (455)
Q Consensus 278 c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S---------~~~q 348 (455)
|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++...+.+.. ....+||||||+...+ ++++
T Consensus 72 ~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 146 (329)
T 1oew_A 72 ATWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSFTE-DSTIDGLLGLAFSTLNTVSPTQQKTFFDN 146 (329)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHH-CTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CeEEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCccccc-cCCCceEEEeccccccccCcCCCCCHHHH
Confidence 789999999987999999999999 5678999999999987665432 2468999999997544 5678
Q ss_pred hhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccE
Q 012844 349 LASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWA 425 (455)
Q Consensus 349 L~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~a 425 (455)
|+++ | +++||+||.+ ..+|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||++.+.. ....+
T Consensus 147 l~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~v~~~~~~~-----~~~~a 215 (329)
T 1oew_A 147 AKAS--LDSPVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVSTKQ--GFWEWTSTGYAVGSGTFKS-----TSIDG 215 (329)
T ss_dssp HTTT--SSSSEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBCTT--SSCEEEEEEEEETTSCCEE-----EEEEE
T ss_pred HHHh--ccCcEEEEEccC--CCCeEEEEeccChHhcccceEEEEccCCC--ceEEEEEeeEEECCeeccC-----CCceE
Confidence 8876 6 8999999985 468999999996 578999999998544 6999999999999986642 23489
Q ss_pred EEeccccCeeecHHHHHHHHHHHHh
Q 012844 426 LFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 426 IiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
||||||++++||+++|++|.++|..
T Consensus 216 iiDSGTt~~~lP~~~~~~l~~~i~~ 240 (329)
T 1oew_A 216 IADTGTTLLYLPATVVSAYWAQVSG 240 (329)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTT
T ss_pred EEeCCCCCEECCHHHHHHHHHhCCC
Confidence 9999999999999999999998843
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=8.9e-41 Score=337.14 Aligned_cols=229 Identities=22% Similarity=0.416 Sum_probs=193.7
Q ss_pred CCceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCC--CCCCCCCCCCCCCccccCCCccccc
Q 012844 185 DSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSC--AKGANPLYKPRMGNILPYKDSLCME 262 (455)
Q Consensus 185 ~s~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C--~~~~~~~ydps~Sstv~C~~~~C~~ 262 (455)
.+.+.+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. .|..| .|..++.|+|++|+|+.
T Consensus 5 ~~~~~~~l~n--~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~~~~~y~~~~SsT~~-------- 73 (341)
T 3k1w_A 5 NTTSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACVYHKLFDASDSSSYK-------- 73 (341)
T ss_dssp CBCEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHHTSCCBCGGGCTTCE--------
T ss_pred CCCccccceE--ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCcccCCCCCCCCcCcCee--------
Confidence 4556788886 45889999999999999999999999999999999 89832 23457899999999842
Q ss_pred cccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEccccc-ccccccccceeeecCCC
Q 012844 263 IQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGL-LLNTLVKTDGILGLSRA 341 (455)
Q Consensus 263 ~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~-~~~~~~~~dGILGLg~~ 341 (455)
. ..|.|.+.|++|+ +.|.+++|+|+| |+..+ ++.|||++...+. +. ....+||||||++
T Consensus 74 --~----------~~~~~~i~Yg~gs-~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~~~~--~~~~~GilGLg~~ 133 (341)
T 3k1w_A 74 --H----------NGTELTLRYSTGT-VSGFLSQDIITV----GGITV-TQMFGEVTEMPALPFM--LAEFDGVVGMGFI 133 (341)
T ss_dssp --E----------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEE-EEEEEEEEECCHHHHT--TCSSSEEEECSCG
T ss_pred --E----------CCCEEEEEECCcE-EEEEEEEEEEEE----CCcee-eEEEEEEEEccccccc--cCCcceEEECCch
Confidence 1 2689999999995 899999999999 56778 9999999987764 32 3568999999998
Q ss_pred CC------CchhHhhhcCCc-ceeEEEEecCCC----CCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEE
Q 012844 342 KV------SLPSQLASQGII-KNVVGHCLTTNA----GGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINY 408 (455)
Q Consensus 342 ~~------S~~~qL~~~g~I-~~vFS~~L~~~~----~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isv 408 (455)
.. +++++|++||+| +++||+||.+.. ..+|.|+|||++ ++.|++.|+|+... .+|.|.+++|++
T Consensus 134 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v 210 (341)
T 3k1w_A 134 EQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---GVWQIQMKGVSV 210 (341)
T ss_dssp GGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST---TSCEEEECCEEE
T ss_pred hhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC---CEEEEEEeEEEE
Confidence 65 478999999999 999999999754 348999999996 56799999999864 699999999999
Q ss_pred CCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 409 GSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 409 gg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
+++.+... ....+||||||++++||+++|++|.+++++.
T Consensus 211 ~~~~~~~~----~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 249 (341)
T 3k1w_A 211 GSSTLLCE----DGCLALVDTGASYISGSTSSIEKLMEALGAK 249 (341)
T ss_dssp TTEEEECT----TCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred CCEEeecC----CCCEEEEECCCChhcCCHHHHHHHHHHcCCe
Confidence 99875432 2358999999999999999999999999764
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2e-40 Score=334.76 Aligned_cols=221 Identities=21% Similarity=0.306 Sum_probs=189.7
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCC--CCCC-------CCCCCCCCCCCCCccccCCCc
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAP--CSSC-------AKGANPLYKPRMGNILPYKDS 258 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~--C~~C-------~~~~~~~ydps~Sstv~C~~~ 258 (455)
+.+|+.. .+++|+++|.||||||++.|+|||||+++||+|. . |..| .|..++.|+|++|+|+.
T Consensus 3 v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~---- 74 (342)
T 3pvk_A 3 VPVTLHN---EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCKQKGTYDPSGSSASQ---- 74 (342)
T ss_dssp EEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGTTCCBCGGGCTTCE----
T ss_pred cceEEec---CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCCCCCcCCCccCccee----
Confidence 5667775 3669999999999999999999999999999865 3 6332 33457899999998832
Q ss_pred cccccccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeec
Q 012844 259 LCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGL 338 (455)
Q Consensus 259 ~C~~~~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGL 338 (455)
. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++... ..+|||||
T Consensus 75 ------~----------~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~--------~~~GilGL 126 (342)
T 3pvk_A 75 ------D----------LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDSTS--------IDQGILGV 126 (342)
T ss_dssp ------E----------EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES--------SSSCEEEC
T ss_pred ------e----------cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEccC--------CCccEEEe
Confidence 1 26899999999988999999999999 57789999999998753 47999999
Q ss_pred CCCC-------CCchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEE
Q 012844 339 SRAK-------VSLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINY 408 (455)
Q Consensus 339 g~~~-------~S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isv 408 (455)
|+.. .+++.+|+++|+| +++||+||.+.....|.|+|||++ ++.|++.|+|+... .+|.|.|++|++
T Consensus 127 g~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v 203 (342)
T 3pvk_A 127 GYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD---RELRISLGSVEV 203 (342)
T ss_dssp SCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS---SSCEEEEEEEEE
T ss_pred cCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc---ceEEEEEeEEEE
Confidence 9986 4789999999999 899999999766678999999985 57899999999876 489999999999
Q ss_pred CCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 409 GSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 409 gg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
+++.+... ...+||||||++++||+++|++|.++|.+..
T Consensus 204 ~g~~~~~~-----~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 204 SGKTINTD-----NVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp TTEEEEEE-----EEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CCEEecCC-----CceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 99988653 2489999999999999999999999998654
No 22
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.8e-40 Score=337.73 Aligned_cols=240 Identities=20% Similarity=0.322 Sum_probs=191.1
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
+.+||.++ +.+.+|+++|+|||| |+|||||+++||+|. +|. ..+.+.|.+..|......
T Consensus 3 ~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~-------------~~~~~~C~s~~C~~~~~~- 61 (381)
T 1t6e_X 3 VLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ-------------PPAEIPCSSPTCLLANAY- 61 (381)
T ss_dssp EEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC-------------CCCCCBTTSHHHHHHHSS-
T ss_pred eEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC-------------CCCccCCCCchhccccCC-
Confidence 56788864 468899999999997 999999999999987 542 123578888888764432
Q ss_pred CCCCCcC--------CCCc-eeeeecCCCCeeeeEEEEEEEEEeecCCCccccce----EEEEEEcccccccccccccce
Q 012844 268 KPGYCET--------CQQC-DYEIEYADHSSSMGVLARDELHLTIENGSLTKPNV----VFGCAYDQQGLLLNTLVKTDG 334 (455)
Q Consensus 268 ~~~~C~~--------~~~c-~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~----~FG~a~~~~g~~~~~~~~~dG 334 (455)
....|.. .+.| .|.+.|+||+.+.|.+++|+|+|+..+|+..++++ .|||++.+..... ....||
T Consensus 62 ~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~--~~~~dG 139 (381)
T 1t6e_X 62 PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL--PRGSTG 139 (381)
T ss_dssp CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS--CTTEEE
T ss_pred CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC--CCCCce
Confidence 2235642 2467 59999999988899999999999865555556554 5799987622111 256899
Q ss_pred eeecCCCCCCchhHhhhcCCcceeEEEEecCCCCCCceEEeCCcCC----CCCCceEEEccCCCCCccEEEEEeEEEECC
Q 012844 335 ILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLV----PSWGMAWVPMLDSPFMELYHTEILKINYGS 410 (455)
Q Consensus 335 ILGLg~~~~S~~~qL~~~g~I~~vFS~~L~~~~~~~G~L~fGg~~~----~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg 410 (455)
|||||++.+|++.||+.+|+++++||+||.+. .+|+|+|||++. +.+++.|+||+.++...+|.|.|++|+||+
T Consensus 140 IlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~ 217 (381)
T 1t6e_X 140 VAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGD 217 (381)
T ss_dssp EEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETT
T ss_pred EEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcC
Confidence 99999999999999999996799999999964 689999999864 479999999997632245679999999999
Q ss_pred eeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 411 SPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 411 ~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
+.+.++...+..+++||||||++++||+++|++|.++|.+++
T Consensus 218 ~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~ 259 (381)
T 1t6e_X 218 TRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL 259 (381)
T ss_dssp EECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh
Confidence 988776544434689999999999999999999999998865
No 23
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.9e-40 Score=340.43 Aligned_cols=220 Identities=19% Similarity=0.353 Sum_probs=189.9
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
..+||.+ +.+..|+++|.||||||++.|+|||||+++||+|. +|..+.|..++.|+|++|+|+. .
T Consensus 52 ~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~SsT~~----------~-- 116 (375)
T 1miq_A 52 DVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSIKNLYDSSKSKSYE----------K-- 116 (375)
T ss_dssp BCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGGSCCBCGGGCTTCE----------E--
T ss_pred ceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCcccccCCCcCCCccCCceE----------E--
Confidence 4468875 45789999999999999999999999999999999 8986666678899999998731 1
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEc----ccccccccccccceeeecCCCCC
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYD----QQGLLLNTLVKTDGILGLSRAKV 343 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~----~~g~~~~~~~~~dGILGLg~~~~ 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+..+++ .|||++. +. .|. ....+||||||++..
T Consensus 117 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~-~f~--~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 117 --------DGTKVDITYGSGT-VKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP-IYS--SVEFDGILGLGWKDL 179 (375)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT-HHH--HSCCCEEEECSSCCT
T ss_pred --------CCcEEEEEeCCCe-EEEEEEEEEEEE----cCceECc-EEEEEEecccccc-ccc--cCCCceEEeCCCCcc
Confidence 2689999999995 899999999999 5678888 9999998 54 332 256899999999864
Q ss_pred ------CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeee
Q 012844 344 ------SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLN 414 (455)
Q Consensus 344 ------S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~ 414 (455)
+++++|++||+| +++||+||.+....+|.|+|||++ ++.|++.|+|+... .+|.|.|+ |+||++.+
T Consensus 180 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~-i~v~g~~~- 254 (375)
T 1miq_A 180 SIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD---LYWQIDLD-VHFGKQTM- 254 (375)
T ss_dssp TCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS---SSSEEEEE-EEETTEEE-
T ss_pred cccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC---ceEEEEEE-EEECCEEc-
Confidence 468899999999 899999999765568999999996 46799999999764 69999999 99999876
Q ss_pred cCcccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 415 LGARNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 415 ~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
....+||||||++++||+++|++|.++|.+
T Consensus 255 ------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 284 (375)
T 1miq_A 255 ------EKANVIVDSGTTTITAPSEFLNKFFANLNV 284 (375)
T ss_dssp ------EEEEEEECTTBSSEEECHHHHHHHHHHHTC
T ss_pred ------ccceEEecCCCccEEcCHHHHHHHHHHhCC
Confidence 135899999999999999999999999976
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.8e-39 Score=343.19 Aligned_cols=226 Identities=24% Similarity=0.394 Sum_probs=189.4
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCccccCCCccccccc
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS---SCAKGANPLYKPRMGNILPYKDSLCMEIQ 264 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~---~C~~~~~~~ydps~Sstv~C~~~~C~~~~ 264 (455)
..+||.+ +.+.+|+++|.||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|+|+.
T Consensus 42 ~~~~l~n--~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~--~~~~y~~~~SsT~~---------- 106 (478)
T 1qdm_A 42 DIVALKN--YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACY--LHSRYKAGASSTYK---------- 106 (478)
T ss_dssp CSGGGCC--GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGG--GSCCBCGGGCTTCB----------
T ss_pred ceEEeEe--ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCcccc--CCCCCCcccCCCee----------
Confidence 4467775 35779999999999999999999999999999998 896 455 46789999998832
Q ss_pred cCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEccccc-ccccccccceeeecCCCCC
Q 012844 265 RNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGL-LLNTLVKTDGILGLSRAKV 343 (455)
Q Consensus 265 ~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~-~~~~~~~~dGILGLg~~~~ 343 (455)
. .+|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||++...+. |. ....|||||||++..
T Consensus 107 ~----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~f~--~~~~dGIlGLg~~~~ 169 (478)
T 1qdm_A 107 K----------NGKPAAIQYGTGS-IAGYFSEDSVTV----GDLVVKDQEFIEATKEPGITFL--VAKFDGILGLGFKEI 169 (478)
T ss_dssp C----------CCCEEEEEETTEE-EEEEEEEEEEEE----TTEEEEEEEEEEEEECCBSHHH--HCSSSEEEECSCGGG
T ss_pred e----------CCcEEEEEcCCCC-eEEEEEEEEEEE----CCeEECCEEEEEEEecCCcccc--cccccceeccccccc
Confidence 1 3689999999995 899999999999 5678899999999987653 22 256799999999876
Q ss_pred C------chhHhhhcCCc-ceeEEEEecCCC--CCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCee
Q 012844 344 S------LPSQLASQGII-KNVVGHCLTTNA--GGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSP 412 (455)
Q Consensus 344 S------~~~qL~~~g~I-~~vFS~~L~~~~--~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~ 412 (455)
+ ++.+|++||+| +++||+||.+.. ..+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.
T Consensus 170 s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~---~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 170 SVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK---GYWQFDMGDVLVGGKS 246 (478)
T ss_dssp CGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE---TTEEEEECCEEETTEE
T ss_pred ccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC---CeEEEEEeEEEECCEE
Confidence 5 46789999999 899999999752 458999999996 46789999999764 6999999999999988
Q ss_pred eecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 413 LNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 413 l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
+.+.. ....+||||||+++++|+++|++|.++|++.
T Consensus 247 ~~~~~---~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (478)
T 1qdm_A 247 TGFCA---GGCAAIADSGTSLLAGPTAIITEINEKIGAA 282 (478)
T ss_dssp CSTTT---TCEEEEECSSCCSEEECHHHHHHHHHHHTCC
T ss_pred EeecC---CCceEEEcCCCCceeCCHHHHHHHHHHhCcc
Confidence 76532 2458999999999999999999999999753
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=7.3e-40 Score=343.70 Aligned_cols=221 Identities=15% Similarity=0.266 Sum_probs=189.6
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
..+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..+.|..++.|+|++|+|+. .
T Consensus 127 ~~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~~~~~ydps~SsT~~----------~-- 191 (451)
T 3qvc_A 127 DNVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCESKNHYDSSKSKTYE----------K-- 191 (451)
T ss_dssp CCCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGTTSCCBCGGGCTTCE----------E--
T ss_pred Cccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccCCCCCCCCCCCcccc----------c--
Confidence 4567775 35789999999999999999999999999999999 8975555668899999999832 1
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEc----ccccccccccccceeeecCCCC-
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYD----QQGLLLNTLVKTDGILGLSRAK- 342 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~----~~g~~~~~~~~~dGILGLg~~~- 342 (455)
.+|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++. ..+ +. ....+||||||++.
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~-f~--~~~~dGILGLg~~~~ 254 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF-YS--ESDVDGVFGLGWKDL 254 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH-HH--HSCCCEEEECSSBCS
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC-cc--CCCCCEEEecCCCcc
Confidence 2689999999996 999999999999 577888 99999998 666 43 25689999999976
Q ss_pred -----CCchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeee
Q 012844 343 -----VSLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLN 414 (455)
Q Consensus 343 -----~S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~ 414 (455)
.+++++|+++|+| +++||+||.+....+|.|+|||++ ++.|++.|+|+... .+|.|.++ |+||++ ..
T Consensus 255 s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~---~~w~v~l~-I~Vgg~-~~ 329 (451)
T 3qvc_A 255 SIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD---LMWQVDLD-VHFGNV-SS 329 (451)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST---TSSEEEEE-EEETTE-EE
T ss_pred cccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC---CeeEEEEE-EEECCc-cC
Confidence 3578999999999 999999999876678999999996 46799999999864 69999999 999998 11
Q ss_pred cCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 415 LGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 415 ~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
....+||||||++++||++++++|.+++++.
T Consensus 330 ------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~ 360 (451)
T 3qvc_A 330 ------KKANVILDSATSVITVPTEFFNQFVESASVF 360 (451)
T ss_dssp ------EEEEEEECTTBSSEEECHHHHHHHHTTTTCE
T ss_pred ------CCceEEEeCCCccccCCHHHHHHHHHHcCCe
Confidence 2358999999999999999999999988753
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.1e-39 Score=325.55 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=187.8
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCccccCCCcccccccc
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS--SCAKGANPLYKPRMGNILPYKDSLCMEIQR 265 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~--~C~~~~~~~ydps~Sstv~C~~~~C~~~~~ 265 (455)
+..||.+ +.+..|+++|.|| ||++.|+|||||+++||+|. .|. .|.+..++.|+|++| |+. .
T Consensus 7 ~~~~l~n--~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S-T~~----------~ 70 (330)
T 1yg9_A 7 LYKLVHV--FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP-KYI----------S 70 (330)
T ss_dssp SCSCEEE--EECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC-EEE----------E
T ss_pred eEeeeec--CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC-ceE----------E
Confidence 4456664 3467999999999 89999999999999999999 897 574467889999999 832 1
Q ss_pred CCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCCC-
Q 012844 266 NHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS- 344 (455)
Q Consensus 266 ~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S- 344 (455)
.+|.|.+.|++|+ +.|.+++|+|+| |+.+++++.|||++.....|. ....+||||||++..+
T Consensus 71 ----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~~~~f~--~~~~~GilGLg~~~~s~ 133 (330)
T 1yg9_A 71 ----------DGNVQVKFFDTGS-AVGRGIEDSLTI----SQLTTSQQDIVLADELSQEVC--ILSADVVVGIAAPGCPN 133 (330)
T ss_dssp ----------EEEEEEEETTTEE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEECTHHH--HTTCSEEEECSCTTSCC
T ss_pred ----------CCCEEEEEECCce-EEEEEEEEEEEE----CCEEEcCeEEEEEEEcccccc--cccCceEEEcCcchhcc
Confidence 2678999999995 599999999999 567889999999998743343 2568999999998765
Q ss_pred ------chhHhhhcCCcceeEEEEecCCCCC--CceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeee
Q 012844 345 ------LPSQLASQGIIKNVVGHCLTTNAGG--GGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLN 414 (455)
Q Consensus 345 ------~~~qL~~~g~I~~vFS~~L~~~~~~--~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~ 414 (455)
++++|+++|+|+++||+||.+.... +|.|+|||++ ++.|++.|+|+... .+|.|.|++|+|+++.+.
T Consensus 134 ~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~ 210 (330)
T 1yg9_A 134 ALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD---DSWKFRLDGVKIGDTTVA 210 (330)
T ss_dssp TTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT---TSCCEECSEEEETTEEEE
T ss_pred ccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC---CEEEEEeCeEEECCEEEc
Confidence 7889999998899999999975333 8999999996 56799999999854 699999999999998764
Q ss_pred cCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 415 LGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 415 ~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
. ....+||||||++++||+++|++|.++|++.
T Consensus 211 ~-----~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~ 242 (330)
T 1yg9_A 211 P-----AGTQAIIDTSKAIIVGPKAYVNPINEAIGCV 242 (330)
T ss_dssp C-----TTCEEEECTTCSSEEEEHHHHHHHHHHHTCE
T ss_pred C-----CCcEEEEecCCccccCCHHHHHHHHHHhCCc
Confidence 1 2358999999999999999999999999763
No 27
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=4.4e-39 Score=323.69 Aligned_cols=213 Identities=22% Similarity=0.274 Sum_probs=183.2
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCC
Q 012844 198 PDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQ 277 (455)
Q Consensus 198 ~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~ 277 (455)
.+.+|+++|.|| +|++.|+|||||+++||+|. +|..|.|..++.|+|++|+ .. .+.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-~~--------------------~~~ 67 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA-TK--------------------LSG 67 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC-EE--------------------CTT
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC-Cc--------------------cCC
Confidence 367999999999 89999999999999999999 8999998889999999887 21 026
Q ss_pred ceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCCC---------chhH
Q 012844 278 CDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS---------LPSQ 348 (455)
Q Consensus 278 c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S---------~~~q 348 (455)
|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++...+.+.. ....+||||||+...+ ++++
T Consensus 68 ~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 68 YSWDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEFVQ-DTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp CBEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT-STTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CEEEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCccccc-cCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 899999999987999999999999 5678999999999987665532 2468999999997654 5689
Q ss_pred hhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccE
Q 012844 349 LASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWA 425 (455)
Q Consensus 349 L~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~a 425 (455)
|+++ | +++||+||.+ ..+|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||++.+.. ....+
T Consensus 143 l~~~--i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~~~~~~-----~~~~a 211 (325)
T 1ibq_A 143 VKSQ--LDSPLFAVQLKH--DAPGVYDFGYIDDSKYTGSITYTDADSSQ--GYWGFSTDGYSIGDGSSSS-----SGFSA 211 (325)
T ss_dssp HGGG--SSSSEEEEEEET--TEEEEEEESSCCGGGBSSCCEEEECBCTT--SSCEEEECEEEETTSCCBS-----CCEEE
T ss_pred HHHh--cCCcEEEEEecC--CCCceEEECCcChhhccCceEEEEcCCCC--ceEEEEECcEEECCeeccC-----CCceE
Confidence 9887 6 8999999995 358999999996 578999999998544 6999999999999986531 23589
Q ss_pred EEeccccCeeecHHHHHHHHHHHHh
Q 012844 426 LFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 426 IiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
||||||++++||+++|++|.++|..
T Consensus 212 iiDSGTt~~~lP~~~~~~i~~~i~~ 236 (325)
T 1ibq_A 212 IADTGTTLILLDDEIVSAYYEQVSG 236 (325)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTT
T ss_pred EEeCCCCcEeCCHHHHHHHHHhCCC
Confidence 9999999999999999999999843
No 28
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=7.2e-39 Score=322.03 Aligned_cols=211 Identities=19% Similarity=0.274 Sum_probs=180.5
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCCc
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQC 278 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~c 278 (455)
+.+|+++|.|| ||++.|+|||||+++||+|. +|..|.|..++.|+|++|+ .. . +.|
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-~~----------~----------~~~ 69 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA-QK----------I----------DGA 69 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC-EE----------E----------EEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC-Cc----------c----------CCC
Confidence 56899999999 89999999999999999999 8999988889999999887 21 0 268
Q ss_pred eeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCCC---------chhHh
Q 012844 279 DYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS---------LPSQL 349 (455)
Q Consensus 279 ~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S---------~~~qL 349 (455)
.|.+.|++|+.+.|.+++|+|+| |+.+++++.|||++...+.+.. ....+||||||++..+ ++++|
T Consensus 70 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 70 TWSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEFTQ-DTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHH-CTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred eEEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEeccccccc-cCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 99999999987999999999999 5678999999999987665432 2468999999997544 56888
Q ss_pred hhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEE
Q 012844 350 ASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWAL 426 (455)
Q Consensus 350 ~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aI 426 (455)
+++ | +++||+||.+ ..+|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||+ .+. .....+|
T Consensus 145 ~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~-~~~-----~~~~~ai 212 (323)
T 1izd_A 145 KSS--LSEPIFAVALKH--NAPGVYDFGYTDSSKYTGSITYTDVDNSQ--GFWGFTADGYSIGS-DSS-----SDSITGI 212 (323)
T ss_dssp GGG--SSSSEEEEECCT--TSCEEEEESSCCTTSEEEEEEEEECBCTT--SSCEEEESEEEETT-EEE-----CCCEEEE
T ss_pred HHh--ccCcEEEEEccC--CCCCEEEECCcCccccccceEEEECCCCC--ceEEEEECeEEECC-ccc-----CCCceEE
Confidence 886 6 8999999985 368999999996 467999999998544 69999999999999 543 1235899
Q ss_pred EeccccCeeecHHHHHHHHHHHHh
Q 012844 427 FDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 427 iDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
|||||++++||+++|++|.++|..
T Consensus 213 iDSGTs~~~lp~~~~~~i~~~i~g 236 (323)
T 1izd_A 213 ADTGTTLLLLDDSIVDAYYEQVNG 236 (323)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTT
T ss_pred EeCCCcceeCCHHHHHHHHHhCCC
Confidence 999999999999999999998853
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=326.18 Aligned_cols=222 Identities=23% Similarity=0.374 Sum_probs=180.5
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCCc
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQC 278 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~c 278 (455)
+..|+++|+||||||++.|+|||||+++||+|. +|..| ++.|+|++|+|+. . ..|
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~SsT~~----------~----------~~~ 66 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSSTYR----------S----------KGF 66 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCTTCE----------E----------EEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCccce----------e----------CCc
Confidence 558999999999999999999999999999998 88766 4689999998832 1 268
Q ss_pred eeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC--------CchhHhh
Q 012844 279 DYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--------SLPSQLA 350 (455)
Q Consensus 279 ~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~--------S~~~qL~ 350 (455)
.|.+.|++|+ +.|.+++|+|+|+. +......+.|+|.....+.+.. ....+||||||+... +++++|.
T Consensus 67 ~~~i~Yg~Gs-~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 67 DVTVKYTQGS-WTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLP-GIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp EEEEECSSCE-EEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCT-TCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred eEEEEECCcE-EEEEEEEEEEEECC--CccceeEEEEEEEEeecceeec-cCcCceEEecCchhcccccccccCHHHHHH
Confidence 9999999995 69999999999952 1111224678888765554421 246799999999764 3567999
Q ss_pred hcCCcceeEEEEecC-------CCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCC
Q 012844 351 SQGIIKNVVGHCLTT-------NAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQ 421 (455)
Q Consensus 351 ~~g~I~~vFS~~L~~-------~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~ 421 (455)
+|+.|+++||+||.+ ....+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+.++...+.
T Consensus 143 ~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~~~ 219 (383)
T 2ewy_A 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE---WYYQIEILKLEIGGQSLNLDCREYN 219 (383)
T ss_dssp HHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB---TTBBCCEEEEEETTEECCCCTTTTT
T ss_pred HccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC---ceEEEEEEEEEECCEEccccccccC
Confidence 998888899999963 23568999999995 57899999999875 5999999999999998876544433
Q ss_pred CccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 422 VGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 422 ~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
...+||||||++++||+++|++|+++|.++.
T Consensus 220 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 250 (383)
T 2ewy_A 220 ADKAIVDSGTTLLRLPQKVFDAVVEAVARAS 250 (383)
T ss_dssp SSCEEECTTCSSEEEEHHHHHHHHHHHHHTT
T ss_pred CccEEEEcCCccccCCHHHHHHHHHHHhhhc
Confidence 4689999999999999999999999998764
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5.5e-39 Score=322.68 Aligned_cols=217 Identities=19% Similarity=0.271 Sum_probs=183.0
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNH 267 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~ 267 (455)
...|+.. +..|+++|+|| ||++.|+|||||+++||+|. +|..|.|..++.|+|++|+ ...
T Consensus 7 ~~~~~~~----~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-~~~------------ 66 (323)
T 1bxo_A 7 TNTPTAN----DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG-KEL------------ 66 (323)
T ss_dssp EEEECGG----GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC-EEE------------
T ss_pred eeeecCC----CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC-ccc------------
Confidence 3445543 56899999999 89999999999999999999 8999998889999998876 210
Q ss_pred CCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC----
Q 012844 268 KPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV---- 343 (455)
Q Consensus 268 ~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~---- 343 (455)
+.|.|++.|++|+.+.|.+++|+|+| |+.+++++.|||++...+.+.. ....+||||||++..
T Consensus 67 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~~ 133 (323)
T 1bxo_A 67 --------SGYTWSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQFQQ-DTNNDGLLGLAFSSINTVQ 133 (323)
T ss_dssp --------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT-CTTCSEEEECSCGGGCCCB
T ss_pred --------CCCeEEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCccccc-CCCCceEEEeCcccccccc
Confidence 26899999999987999999999999 5678899999999987665432 246899999999754
Q ss_pred -----CchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeec
Q 012844 344 -----SLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNL 415 (455)
Q Consensus 344 -----S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~ 415 (455)
+++++|+++ | +++||+||.+ ..+|.|+|||++ ++.|++.|+|+.... .+|.|.|++|+||+ ...
T Consensus 134 ~~~~~~~~~~l~~~--i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~-~~~- 205 (323)
T 1bxo_A 134 PQSQTTFFDTVKSS--LAQPLFAVALKH--QQPGVYDFGFIDSSKYTGSLTYTGVDNSQ--GFWSFNVDSYTAGS-QSG- 205 (323)
T ss_dssp SSCCCCHHHHHGGG--BSSSEEEEECCS--SSCEEEEESSCCGGGBSSCCEEEECBCTT--SSCEEEEEEEEETT-EEE-
T ss_pred cCCCCCHHHHHHHh--cCCcEEEEEEeC--CCCceEEEeCcChhhccCceEEEECCCCC--CeEEEEEeeEEECC-ccC-
Confidence 357889876 6 8999999985 368999999996 578999999998554 69999999999999 211
Q ss_pred CcccCCCccEEEeccccCeeecHHHHHHHHHHHHh
Q 012844 416 GARNSQVGWALFDTGSSYTYFTKQAYSELIASVST 450 (455)
Q Consensus 416 ~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~ 450 (455)
....+||||||++++||+++|++|.++|..
T Consensus 206 -----~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~ 235 (323)
T 1bxo_A 206 -----DGFSGIADTGTTLLLLDDSVVSQYYSQVSG 235 (323)
T ss_dssp -----EEEEEEECTTCSSEEECHHHHHHHHTTSTT
T ss_pred -----CCceEEEeCCCCceeCCHHHHHHHHHhCCC
Confidence 234899999999999999999999998843
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.1e-38 Score=323.25 Aligned_cols=221 Identities=18% Similarity=0.289 Sum_probs=180.9
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCCc
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQC 278 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~c 278 (455)
+..|+++|.||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+|+. . ..|
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~SsT~~----------~----------~~~ 74 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSSTYR----------D----------LRK 74 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCTTCE----------E----------EEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCCCce----------e----------CCc
Confidence 568999999999999999999999999999998 78654 5789999998832 1 268
Q ss_pred eeeeecCCCCeeeeEEEEEEEEEeecCCCcccc-ceEEEEEEcccccccccccccceeeecCCCCC--------CchhHh
Q 012844 279 DYEIEYADHSSSMGVLARDELHLTIENGSLTKP-NVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--------SLPSQL 349 (455)
Q Consensus 279 ~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~-~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~--------S~~~qL 349 (455)
.|.+.|++|+ +.|.+++|+|+|+. +.... .+.|+|.....+.|.. ....+||||||+... +++.+|
T Consensus 75 ~~~i~Yg~Gs-~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~-~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 75 GVYVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFIN-GSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp EEEEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCT-TCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred eEEEEECCcE-EEEEEEeEEEEECC---CCCceEEEEEEEEEccCccccc-ccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 9999999995 59999999999952 22222 4678887765444421 246899999999754 466799
Q ss_pred hhcCCcceeEEEEecCC----------CCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCc
Q 012844 350 ASQGIIKNVVGHCLTTN----------AGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGA 417 (455)
Q Consensus 350 ~~~g~I~~vFS~~L~~~----------~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~ 417 (455)
++|+.|+++||+||.+. ...+|.|+|||++ ++.|++.|+|+... .+|.|.|++|+||++.+.++.
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~ 226 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKMDC 226 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEETTEECCCCG
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC---ceEEEEEEEEEECCEEcccCc
Confidence 99999988999999752 1368999999996 46799999999864 599999999999999887654
Q ss_pred ccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 418 RNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 418 ~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
..+....+||||||++++||+++|++|+++|.+..
T Consensus 227 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 261 (395)
T 2qp8_A 227 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 261 (395)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred cccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhc
Confidence 33334589999999999999999999999998764
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5.6e-38 Score=329.58 Aligned_cols=222 Identities=18% Similarity=0.283 Sum_probs=183.0
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCCc
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQC 278 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~c 278 (455)
+..|+++|+||||||+|.|+|||||+++||+|. +| | ..++.|+|++|+|+.. ..|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c--~~~~~y~~~~SsT~~~--------------------~~~ 127 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--P--FLHRYYQRQLSSTYRD--------------------LRK 127 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--T--TCSCCCCGGGCTTCEE--------------------EEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--c--ccCCcccCCCCCCccc--------------------CCc
Confidence 458999999999999999999999999999998 77 4 3467899999998421 268
Q ss_pred eeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC--------CchhHhh
Q 012844 279 DYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV--------SLPSQLA 350 (455)
Q Consensus 279 ~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~--------S~~~qL~ 350 (455)
.|.+.|++|+ +.|.+++|+|+|+. +......+.|+|++...+.+.. ....+||||||+... +++++|+
T Consensus 128 ~~~i~Yg~Gs-~~G~~~~Dtv~ig~--~~~~~~~~~~~~~~~~~~~~~~-~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 203 (455)
T 3lpj_A 128 GVYVPYTQGK-WEGELGTDLVSIPH--GPNVTVRANIAAITESDKFFIN-GSNWEGILGLAYAEIARPDDSLEPFFDSLV 203 (455)
T ss_dssp EEEEECSSCE-EEEEEEEEEEECTT--SCSCEEEEEEEEEEEEESCSCT-TCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred cEEEEeCCeE-EEEEEEEEEEEECC--CcceeeEEEEEEEEccCccccc-CCCcceEEEeCccccccccCCCCcHHHHHH
Confidence 9999999995 69999999999952 1112224678998876655432 356899999998753 5678999
Q ss_pred hcCCcceeEEEEecCC----------CCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcc
Q 012844 351 SQGIIKNVVGHCLTTN----------AGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGAR 418 (455)
Q Consensus 351 ~~g~I~~vFS~~L~~~----------~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~ 418 (455)
+||+|+++||+||.+. ...+|.|+|||++ ++.|++.|+|+... .+|.|.+++|+||++.+.++..
T Consensus 204 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~~~~ 280 (455)
T 3lpj_A 204 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKMDCK 280 (455)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEETTEECCCCGG
T ss_pred HccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC---ceeEEEEeEEEECCEEcccccc
Confidence 9999988999999753 3468999999996 56799999999874 6999999999999998876543
Q ss_pred cCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 419 NSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 419 ~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
......+||||||++++||+++|++|+++|.+..
T Consensus 281 ~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 314 (455)
T 3lpj_A 281 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 314 (455)
T ss_dssp GGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHT
T ss_pred ccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhc
Confidence 3334589999999999999999999999999864
No 33
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.3e-37 Score=321.42 Aligned_cols=221 Identities=18% Similarity=0.273 Sum_probs=179.7
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCCCCCCcCCCCc
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQC 278 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~~~~C~~~~~c 278 (455)
+..|+++|.||||||+|.|+|||||+++||+|. +| | ..++.|+|++|+|+. . ..|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~--~~~~~y~~~~SsT~~----------~----------~~~ 81 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--P--FLHRYYQRQLSSTYR----------D----------LRK 81 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--T--TCSCCCCGGGCTTCE----------E----------EEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--C--cccCCcCcccCcccc----------c----------CCC
Confidence 458999999999999999999999999999998 77 3 346789999999832 1 268
Q ss_pred eeeeecCCCCeeeeEEEEEEEEEeecCCCcccc-ceEEEEEEcccccccccccccceeeecCCCC--------CCchhHh
Q 012844 279 DYEIEYADHSSSMGVLARDELHLTIENGSLTKP-NVVFGCAYDQQGLLLNTLVKTDGILGLSRAK--------VSLPSQL 349 (455)
Q Consensus 279 ~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~-~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~--------~S~~~qL 349 (455)
.|.+.|++|+ +.|.+++|+|+|+. +.... .+.|+|+....+.+.. ....+||||||+.. .+++++|
T Consensus 82 ~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~-~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFIN-GSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCT-TCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEE-EEEEEEEEEEEECC---ccccceeeeEEEEEcccccccc-CCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 9999999995 79999999999952 22222 3458888776554432 35689999999875 3567899
Q ss_pred hhcCCcceeEEEEecCC----------CCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCc
Q 012844 350 ASQGIIKNVVGHCLTTN----------AGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGA 417 (455)
Q Consensus 350 ~~~g~I~~vFS~~L~~~----------~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~ 417 (455)
+++|+|+++||+||.+. ...+|.|+|||++ ++.|++.|+|+... .+|.|.+++|+||++.+.++.
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB---TTBEECEEEEEETTEECCCCG
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC---cEEEEEEeEEEECCEEecccc
Confidence 99999988999999742 3458999999996 56799999999874 699999999999999887654
Q ss_pred ccCCCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844 418 RNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLI 452 (455)
Q Consensus 418 ~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v 452 (455)
.......+||||||++++||+++|++|+++|.+..
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 268 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 268 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhc
Confidence 33334589999999999999999999999999874
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-37 Score=312.11 Aligned_cols=210 Identities=24% Similarity=0.376 Sum_probs=177.6
Q ss_pred eeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccCCC
Q 012844 189 IFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHK 268 (455)
Q Consensus 189 ~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~~~ 268 (455)
.+||.+. +..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|++.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--------------- 54 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--------------- 54 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE---------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc---------------
Confidence 4677752 568999999999999999999999999999875 36999887651
Q ss_pred CCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCCC-----
Q 012844 269 PGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV----- 343 (455)
Q Consensus 269 ~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~----- 343 (455)
..|.|.+.|++|+ +.|.+++|+|+| |+.+++++.|||++...+ + ...+||||||+...
T Consensus 55 -------~~~~~~i~Yg~Gs-~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~~-~----~~~~GilGLg~~~~s~~~~ 117 (340)
T 1wkr_A 55 -------TSDKVSVTYGSGS-FSGTEYTDTVTL----GSLTIPKQSIGVASRDSG-F----DGVDGILGVGPVDLTVGTL 117 (340)
T ss_dssp -------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEES-C----TTCSEEEECSCGGGGTTSE
T ss_pred -------cCceEEEEECCcE-EEEEEEEEEEEE----CCEEEcceEEEEEEccCC-C----cCCCcEEECCccccccccc
Confidence 2689999999995 899999999999 567889999999998755 2 35899999998754
Q ss_pred ---------CchhHhhhcCCc-ceeEEEEecCC---CCCCceEEeCCcC--CCCCCceEEEccCCCC-CccEEEEEeEEE
Q 012844 344 ---------SLPSQLASQGII-KNVVGHCLTTN---AGGGGYMFLGHDL--VPSWGMAWVPMLDSPF-MELYHTEILKIN 407 (455)
Q Consensus 344 ---------S~~~qL~~~g~I-~~vFS~~L~~~---~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~-~~~y~v~l~~Is 407 (455)
+++.+|+++|+| +++||+||.+. ....|.|+|||++ ++.|++.|+|+..... ..+|.|. .+|+
T Consensus 118 ~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~ 196 (340)
T 1wkr_A 118 SPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIR 196 (340)
T ss_dssp ESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEE
T ss_pred cccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEE
Confidence 457899999999 89999999863 2457999999996 5789999999987521 3799999 9999
Q ss_pred ECC-eeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 408 YGS-SPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 408 vgg-~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
|++ +.+.. ...+||||||++++||+++|++|.+++++.
T Consensus 197 v~~~~~l~~------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~ 235 (340)
T 1wkr_A 197 YGSSTSILS------STAGIVDTGTTLTLIASDAFAKYKKATGAV 235 (340)
T ss_dssp ETTTEEEEE------EEEEEECTTBCSEEECHHHHHHHHHHHTCE
T ss_pred ECCCeEccC------CCeEEEeCCcccccCCHHHHHHHHHhhCCE
Confidence 998 77642 248999999999999999999999988764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.86 E-value=1.3e-21 Score=187.92 Aligned_cols=138 Identities=21% Similarity=0.328 Sum_probs=114.6
Q ss_pred CCccccceEEEEEEcccccccccccccceeeecCCCCC------CchhHhhhcCCc-ceeEEEEecCCCCC--CceEEeC
Q 012844 306 GSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKV------SLPSQLASQGII-KNVVGHCLTTNAGG--GGYMFLG 376 (455)
Q Consensus 306 g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~------S~~~qL~~~g~I-~~vFS~~L~~~~~~--~G~L~fG 376 (455)
|+.+++++.|||++...+.+.. ....|||||||++.. +++++|+++|+| +++||+||.+.... +|.|+||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~-~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fG 79 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFI-AAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLG 79 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTT-SCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEET
T ss_pred CCeEECCeEEEEEEEccCCccc-cccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEEC
Confidence 3567889999999988664321 357899999999764 467899999999 99999999976433 8999999
Q ss_pred CcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844 377 HDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451 (455)
Q Consensus 377 g~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~ 451 (455)
|++ ++.|++.|+|+... .+|.|.+++|+|+++.+.. .....+||||||+++++|+++|++|.+++++.
T Consensus 80 g~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~----~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 149 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTRK---AYWQVHLDQVEVASGLTLC----KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAV 149 (241)
T ss_dssp SCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTSCEES----TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred CcCHHHcCCceEEEECccc---cEEEEEEeEEEECCeeEec----cCCCEEEEECCCccccCCHHHHHHHHHHhCCe
Confidence 996 46799999999864 6999999999999986532 12358999999999999999999999999753
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.83 E-value=6.9e-21 Score=158.87 Aligned_cols=89 Identities=24% Similarity=0.488 Sum_probs=76.2
Q ss_pred eeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCccccCCCcccccc
Q 012844 188 SIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCS----SCAKGANPLYKPRMGNILPYKDSLCMEI 263 (455)
Q Consensus 188 ~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~----~C~~~~~~~ydps~Sstv~C~~~~C~~~ 263 (455)
+.+||.+ +.+..|+++|.||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|+|+.
T Consensus 3 ~~~~l~n--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~--~~~~y~p~~SsT~~--------- 68 (97)
T 1lya_A 3 IPEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACW--IHHKYNSDKSSTYV--------- 68 (97)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHH--TSCCBCGGGCTTCE---------
T ss_pred ceEeeEE--CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccC--CCCCCCchhCCCce---------
Confidence 3467764 35779999999999999999999999999999999 897 465 46889999999832
Q ss_pred ccCCCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEe
Q 012844 264 QRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLT 302 (455)
Q Consensus 264 ~~~~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~ 302 (455)
. ..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 69 -~----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 69 -K----------NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp -E----------EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred -e----------CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 1 2689999999995 8999999999995
No 37
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=74.81 E-value=3 Score=34.31 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=23.3
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeEec
Q 012844 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQC 230 (455)
Q Consensus 202 Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~ 230 (455)
-+++|.||- |.+.+++|||++++-+..
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 357799985 999999999999999973
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=73.78 E-value=3.3 Score=33.82 Aligned_cols=27 Identities=26% Similarity=0.231 Sum_probs=23.1
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 203 FTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 203 ~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
+++|.||- |.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 46789985 9999999999999988644
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=72.88 E-value=3.2 Score=35.58 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=26.5
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 199 DGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 199 ~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
.+.|++++.|+. +++.+++|||++.+-+...
T Consensus 24 ~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 24 VPMLYINIEINN--YPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred cceEEEEEEECC--EEEEEEEECCCCccccCHH
Confidence 567999999975 7999999999999988653
No 40
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=72.35 E-value=3.9 Score=34.24 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=24.5
Q ss_pred EEEEEEc---CCCceEEEEEeCCCCceeEecC
Q 012844 203 FTYMIVG---NPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 203 ~~~I~IG---TPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
.++|+|| +|+|.+..++|||.+++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4566666 7899999999999999999865
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=67.43 E-value=6.3 Score=33.64 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=24.2
Q ss_pred EEECCeeeecCcccCCCccEEEeccccCeeecHHHHHHH
Q 012844 406 INYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSEL 444 (455)
Q Consensus 406 Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l 444 (455)
+.+||+.+ .++||||++.+.++.+..+.+
T Consensus 31 v~InG~~~----------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV----------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE----------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE----------EEEEECCCCccccCHHHHHHc
Confidence 56888855 479999999999999887764
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=64.37 E-value=6.5 Score=32.04 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=22.9
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 203 FTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 203 ~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
+++|.||- |.+.+++|||.+++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 56788985 9999999999999988643
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=63.09 E-value=7.1 Score=33.90 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=24.3
Q ss_pred EEECCeeeecCcccCCCccEEEeccccCeeecHHHHHHH
Q 012844 406 INYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSEL 444 (455)
Q Consensus 406 Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~~l 444 (455)
+.|||+.+ .++||||++.+.++.+..+.+
T Consensus 29 ~~Ing~~v----------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL----------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE----------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE----------EEEEeCCCCcEeeCHHHHHHc
Confidence 34788765 479999999999999998875
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=59.27 E-value=7.7 Score=33.70 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=26.0
Q ss_pred ceEEEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 200 GLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 200 ~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
..|++++.|.. +++.+++|||++.+-+...
T Consensus 23 ~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 36899999964 8999999999999999764
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=58.78 E-value=8.8 Score=32.14 Aligned_cols=24 Identities=29% Similarity=0.484 Sum_probs=21.3
Q ss_pred EEEcCCCceEEEEEeCCCCceeEecC
Q 012844 206 MIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 206 I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
|.||- |.+.+++|||.+++-+...
T Consensus 18 ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred EEECC--EEEEEEecCCCCcEEEccc
Confidence 88985 9999999999999988754
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=51.26 E-value=15 Score=30.57 Aligned_cols=27 Identities=19% Similarity=0.285 Sum_probs=23.2
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 203 FTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 203 ~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
.++|.||- |.+..++|||.+++-+...
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecc
Confidence 46688875 9999999999999999765
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=43.34 E-value=23 Score=28.15 Aligned_cols=16 Identities=38% Similarity=0.488 Sum_probs=14.0
Q ss_pred cEEEeccccCeeecHH
Q 012844 424 WALFDTGSSYTYFTKQ 439 (455)
Q Consensus 424 ~aIiDTGTt~t~LP~~ 439 (455)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 5899999999999853
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=37.48 E-value=30 Score=29.51 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=23.5
Q ss_pred eEEEEEEEcCCCceEEEEEeCCCCceeEecC
Q 012844 201 LYFTYMIVGNPPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 201 ~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~ 231 (455)
.-+++++|+- |.+.+++|||.+++-+...
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 3456688875 8999999999999988654
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=34.12 E-value=33 Score=31.41 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=23.1
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeEec
Q 012844 202 YFTYMIVGNPPRPYYLDMDTGSDLTWIQC 230 (455)
Q Consensus 202 Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~ 230 (455)
-.++|.||- |.+.+++|||.+++-+..
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEec
Confidence 467889986 999999999999998864
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=34.04 E-value=30 Score=29.20 Aligned_cols=19 Identities=26% Similarity=0.281 Sum_probs=16.7
Q ss_pred ceEEEEEeCCCCceeEecC
Q 012844 213 RPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 213 Q~~~v~~DTGSs~lWV~~~ 231 (455)
|.+..++|||.+++-+...
T Consensus 30 q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 30 VYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEECTTCSSCEEETT
T ss_pred EEEEEEecCCCCcEEEecc
Confidence 6789999999999999754
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=29.90 E-value=50 Score=31.64 Aligned_cols=41 Identities=27% Similarity=0.291 Sum_probs=27.1
Q ss_pred CCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecHH
Q 012844 383 WGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQ 439 (455)
Q Consensus 383 g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~ 439 (455)
|.+...|+..+ ..|.+ .|.||.+.+ .++||||++.+++|..
T Consensus 4 g~v~~~~~~~~---~~Y~~---~i~iG~Q~~----------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTAND---EEYIT---PVTIGGTTL----------NLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGG---SCEEE---EEEETTEEE----------EEEEETTCCCEEECBT
T ss_pred CceeeeecCCC---CEEEE---EEEECCEEE----------EEEEeCCCcceEEecC
Confidence 34455665433 45654 466885544 5799999999999853
No 52
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=27.22 E-value=60 Score=31.13 Aligned_cols=41 Identities=27% Similarity=0.312 Sum_probs=26.8
Q ss_pred CCceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecHH
Q 012844 383 WGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQ 439 (455)
Q Consensus 383 g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~ 439 (455)
|.+.-.|+... ..|.+ .|.||.+.+ .++||||++.+++|..
T Consensus 4 ~~v~~~~~~~~---~~Y~~---~i~iG~q~~----------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSND---EEYIT---QVTVGDDTL----------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGG---CCEEE---EEEETTEEE----------EEEEETTCCCEEECBT
T ss_pred CceeeeEcCCC---CEEEE---EEEECCEEE----------EEEEcCCCcceEEecC
Confidence 34445565433 45644 466785444 5799999999999853
No 53
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.51 E-value=69 Score=31.09 Aligned_cols=44 Identities=27% Similarity=0.409 Sum_probs=28.8
Q ss_pred CCCceEEEccCCCCCccEEEEEeEEEEC--CeeeecCcccCCCccEEEeccccCeeecHH
Q 012844 382 SWGMAWVPMLDSPFMELYHTEILKINYG--SSPLNLGARNSQVGWALFDTGSSYTYFTKQ 439 (455)
Q Consensus 382 ~g~l~~tPl~~~~~~~~y~v~l~~Isvg--g~~l~~~~~~~~~~~aIiDTGTt~t~LP~~ 439 (455)
.|.+...|+....+ ..|.+ .|.|| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~-~~Y~~---~i~iGtP~q~~----------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDL-EEYAI---PVSIGTPGQDF----------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTT-TEEEE---EEEETTTTEEE----------EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCC-CEEEE---EEEECCCCcEE----------EEEEcCCCCCeEECCC
Confidence 35666778775321 45644 45677 3333 5899999999999753
No 54
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=23.34 E-value=70 Score=29.22 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=23.1
Q ss_pred eEEEE---EEEcC-----CCceEEEEEeCCCCceeEecC
Q 012844 201 LYFTY---MIVGN-----PPRPYYLDMDTGSDLTWIQCD 231 (455)
Q Consensus 201 ~Y~~~---I~IGT-----PpQ~~~v~~DTGSs~lWV~~~ 231 (455)
.|.++ |.||. +.....++||||++++++|..
T Consensus 189 ~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 189 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred eEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 56554 67775 234578999999999999864
No 55
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=21.82 E-value=65 Score=30.77 Aligned_cols=41 Identities=34% Similarity=0.423 Sum_probs=26.2
Q ss_pred CceEEEccCCCCCccEEEEEeEEEECC--eeeecCcccCCCccEEEeccccCeeecH
Q 012844 384 GMAWVPMLDSPFMELYHTEILKINYGS--SPLNLGARNSQVGWALFDTGSSYTYFTK 438 (455)
Q Consensus 384 ~l~~tPl~~~~~~~~y~v~l~~Isvgg--~~l~~~~~~~~~~~aIiDTGTt~t~LP~ 438 (455)
++.-.|+....+ ..|.+ .|.||. +.+ .++||||++.+++|.
T Consensus 2 ~~~~~~l~n~~~-~~Y~~---~i~iGtP~q~~----------~v~~DTGSs~~Wv~~ 44 (323)
T 3cms_A 2 EVASVPLTNYLD-SQYFG---KIYLGTPPQEF----------TVLFDTGSSDFWVPS 44 (323)
T ss_dssp CCEEEEEEEETT-TEEEE---EEEETTTTEEE----------EEEEETTCCCEEEEB
T ss_pred CcceeeeEeccC-CEEEE---EEEECCCCeEE----------EEEEeCCccceEEcC
Confidence 445566664221 34544 456773 332 589999999999985
No 56
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=21.81 E-value=87 Score=31.35 Aligned_cols=44 Identities=18% Similarity=0.189 Sum_probs=27.9
Q ss_pred CceEEEccCCCCCccEEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecH
Q 012844 384 GMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTK 438 (455)
Q Consensus 384 ~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~ 438 (455)
.....||..+.....|.+ .|.+|.- ++. -.++||||+.++++|-
T Consensus 7 ~~~~~pv~~d~~~~~Y~~---~i~iGTP-----pq~---~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVT---TINQRTP-----LVS---ENLVVDLGGRFLWVDC 50 (413)
T ss_dssp SEEEEEEEECTTTCCEEE---EEEETTT-----TEE---EEEEEETTCSSEEEEC
T ss_pred ccEEEEeeecCCCCeEEE---EEEcCCC-----Ccc---eEEEEeCCChhhhccc
Confidence 445677776654345544 4456642 111 2689999999999984
No 57
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=21.65 E-value=52 Score=26.71 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=26.1
Q ss_pred EEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecHHHHH
Q 012844 399 YHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYS 442 (455)
Q Consensus 399 y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~~y~ 442 (455)
|+=.+..|.|+|+.+ .+++|||.-.+.+..+...
T Consensus 6 ~~RP~v~v~I~Gq~~----------e~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL----------NVLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEE----------EEEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEE----------EEEeccCCCcEEEccccCc
Confidence 444556788999854 5799999999999976653
No 58
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.89 E-value=73 Score=30.60 Aligned_cols=29 Identities=21% Similarity=0.319 Sum_probs=20.9
Q ss_pred cEEEEEeEEEECCeeeecCcccCCCccEEEeccccCeeecHH
Q 012844 398 LYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQ 439 (455)
Q Consensus 398 ~y~v~l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~~ 439 (455)
.|.+ .|.||.+.+ .++||||++.+++|..
T Consensus 18 ~Y~~---~i~iG~Q~~----------~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 18 QYAG---ITKIGNQNF----------LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TSEE---EEEETTEEE----------EEEEETTCCCEEEECT
T ss_pred EEEE---EEEECCEEE----------EEEEeCCCcceEEecC
Confidence 4544 466775544 5799999999999853
No 59
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=20.40 E-value=89 Score=26.50 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=20.6
Q ss_pred EeEEEECCeeeecCcccCCCccEEEeccccCeeecH
Q 012844 403 ILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTK 438 (455)
Q Consensus 403 l~~Isvgg~~l~~~~~~~~~~~aIiDTGTt~t~LP~ 438 (455)
+..+.|||+.+ .+++|||...+.|.+
T Consensus 24 ~v~i~I~G~~~----------~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVGGQPV----------TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEETTEEE----------EEEECTTCSSCEECS
T ss_pred EEEEEECCEEE----------EEEEeCCCCeEEEcc
Confidence 34578888765 479999999999875
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=20.27 E-value=77 Score=31.40 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=25.2
Q ss_pred EEEccCCCCCccEEEEEeEEEECC--eeeecCcccCCCccEEEeccccCeeecHH
Q 012844 387 WVPMLDSPFMELYHTEILKINYGS--SPLNLGARNSQVGWALFDTGSSYTYFTKQ 439 (455)
Q Consensus 387 ~tPl~~~~~~~~y~v~l~~Isvgg--~~l~~~~~~~~~~~aIiDTGTt~t~LP~~ 439 (455)
-.||..+.....|.+ .|.||. +.+ .++||||++.+++|..
T Consensus 11 ~~pl~~~~~~~~Y~~---~i~iGTP~Q~~----------~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWA---NLQKRTPLMQV----------PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEE---EEEETTTTEEE----------EEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEE---EEECCCCCcee----------EEEEECCCCceeECCC
Confidence 366663222245655 455773 222 5899999999999853
Done!