Query 012845
Match_columns 455
No_of_seqs 156 out of 1801
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 17:20:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 7.6E-42 2.6E-46 354.5 39.9 363 41-433 3-375 (535)
2 2qa1_A PGAE, polyketide oxygen 100.0 3.3E-40 1.1E-44 338.4 36.5 339 41-431 9-349 (500)
3 2qa2_A CABE, polyketide oxygen 100.0 4E-40 1.4E-44 337.6 36.2 339 41-431 10-350 (499)
4 2r0c_A REBC; flavin adenine di 100.0 1.3E-39 4.6E-44 337.9 37.3 358 41-433 24-383 (549)
5 3fmw_A Oxygenase; mithramycin, 100.0 9.4E-40 3.2E-44 339.3 31.0 345 41-432 47-395 (570)
6 1pn0_A Phenol 2-monooxygenase; 100.0 2.6E-38 8.8E-43 334.2 37.9 359 42-433 7-425 (665)
7 4hb9_A Similarities with proba 100.0 7.9E-39 2.7E-43 320.4 24.8 354 44-431 2-384 (412)
8 3rp8_A Flavoprotein monooxygen 100.0 3.3E-38 1.1E-42 316.3 29.2 342 41-434 21-373 (407)
9 2dkh_A 3-hydroxybenzoate hydro 100.0 2.1E-37 7.3E-42 326.7 34.9 352 41-428 30-411 (639)
10 2vou_A 2,6-dihydroxypyridine h 100.0 4.9E-37 1.7E-41 306.7 25.4 352 41-447 3-384 (397)
11 2x3n_A Probable FAD-dependent 100.0 1.1E-37 3.8E-42 311.5 20.5 340 42-433 5-361 (399)
12 1k0i_A P-hydroxybenzoate hydro 100.0 4.1E-36 1.4E-40 299.6 27.7 343 43-435 2-354 (394)
13 3oz2_A Digeranylgeranylglycero 100.0 4.2E-36 1.4E-40 298.8 25.8 337 41-427 2-346 (397)
14 3c96_A Flavin-containing monoo 100.0 7.3E-36 2.5E-40 299.5 27.7 349 41-431 2-372 (410)
15 2xdo_A TETX2 protein; tetracyc 100.0 3E-35 1E-39 293.8 24.2 345 41-434 24-388 (398)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.8E-33 6E-38 279.2 28.9 324 42-427 10-346 (379)
17 3e1t_A Halogenase; flavoprotei 100.0 3.3E-32 1.1E-36 280.4 34.5 353 41-432 5-370 (512)
18 3cgv_A Geranylgeranyl reductas 100.0 3.8E-33 1.3E-37 278.1 26.4 339 42-434 3-353 (397)
19 3nix_A Flavoprotein/dehydrogen 100.0 3.3E-32 1.1E-36 273.6 33.2 350 41-429 3-357 (421)
20 3atr_A Conserved archaeal prot 100.0 3.2E-32 1.1E-36 276.4 28.8 339 41-432 4-356 (453)
21 3i3l_A Alkylhalidase CMLS; fla 100.0 2.1E-32 7.2E-37 284.6 27.0 350 40-429 20-379 (591)
22 3c4a_A Probable tryptophan hyd 100.0 2.2E-33 7.5E-38 278.7 12.4 331 44-442 1-342 (381)
23 2gmh_A Electron transfer flavo 100.0 5.1E-29 1.7E-33 259.7 35.4 344 41-427 33-421 (584)
24 2pyx_A Tryptophan halogenase; 100.0 5.1E-30 1.7E-34 264.9 23.5 346 42-430 6-414 (526)
25 2weu_A Tryptophan 5-halogenase 100.0 2.8E-28 9.7E-33 251.2 28.4 338 43-430 2-406 (511)
26 2aqj_A Tryptophan halogenase, 100.0 4.2E-28 1.4E-32 251.3 26.6 339 41-430 3-398 (538)
27 2e4g_A Tryptophan halogenase; 100.0 6.7E-28 2.3E-32 250.2 27.7 339 42-430 24-429 (550)
28 3ihm_A Styrene monooxygenase A 99.9 1.3E-25 4.4E-30 226.1 19.1 323 42-429 21-376 (430)
29 2bry_A NEDD9 interacting prote 99.9 4E-24 1.4E-28 218.8 15.6 316 41-423 90-454 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 4E-17 1.4E-21 158.4 23.5 190 190-399 121-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.7 2.3E-15 7.8E-20 148.7 18.4 70 150-246 159-229 (382)
32 1y56_B Sarcosine oxidase; dehy 99.6 9.5E-15 3.2E-19 144.3 18.7 70 150-246 144-215 (382)
33 2gag_B Heterotetrameric sarcos 99.6 9.8E-15 3.4E-19 145.2 18.6 71 150-247 169-241 (405)
34 3kkj_A Amine oxidase, flavin-c 99.6 2.5E-14 8.4E-19 133.5 18.1 37 43-79 2-38 (336)
35 2gf3_A MSOX, monomeric sarcosi 99.6 2.5E-13 8.5E-18 134.3 24.0 173 43-244 3-213 (389)
36 2oln_A NIKD protein; flavoprot 99.6 2.1E-13 7.1E-18 135.4 23.0 176 42-245 3-217 (397)
37 3dme_A Conserved exported prot 99.6 9.8E-14 3.3E-18 135.9 17.6 73 150-246 145-220 (369)
38 3nyc_A D-arginine dehydrogenas 99.5 3.8E-13 1.3E-17 132.4 20.7 70 150-246 149-219 (381)
39 3v76_A Flavoprotein; structura 99.5 8.4E-14 2.9E-18 138.8 14.2 143 39-237 23-187 (417)
40 2ywl_A Thioredoxin reductase r 99.5 2.5E-12 8.4E-17 112.9 17.8 117 44-245 2-118 (180)
41 2i0z_A NAD(FAD)-utilizing dehy 99.5 5E-14 1.7E-18 142.2 7.6 163 41-247 24-212 (447)
42 2uzz_A N-methyl-L-tryptophan o 99.5 1.1E-11 3.6E-16 121.8 23.9 167 43-238 2-205 (372)
43 2qcu_A Aerobic glycerol-3-phos 99.4 6.1E-11 2.1E-15 121.3 28.8 74 150-244 144-219 (501)
44 3ps9_A TRNA 5-methylaminomethy 99.4 1.8E-12 6.3E-17 137.5 17.9 69 150-244 412-481 (676)
45 3pvc_A TRNA 5-methylaminomethy 99.4 2.3E-12 8E-17 136.9 17.6 69 150-243 407-476 (689)
46 3da1_A Glycerol-3-phosphate de 99.4 1.1E-10 3.9E-15 120.7 28.2 75 151-246 166-242 (561)
47 2gqf_A Hypothetical protein HI 99.4 3.5E-12 1.2E-16 126.6 14.8 142 41-237 2-168 (401)
48 3dje_A Fructosyl amine: oxygen 99.4 1.2E-12 4.1E-17 131.7 11.5 63 150-238 156-222 (438)
49 3nlc_A Uncharacterized protein 99.4 4E-12 1.4E-16 130.3 14.2 68 153-246 218-290 (549)
50 3i6d_A Protoporphyrinogen oxid 99.3 6.4E-11 2.2E-15 119.9 20.9 62 42-104 4-86 (470)
51 1rp0_A ARA6, thiazole biosynth 99.3 1.1E-11 3.9E-16 117.1 14.1 143 42-243 38-197 (284)
52 3c4n_A Uncharacterized protein 99.3 3.3E-12 1.1E-16 127.2 10.6 175 42-246 35-247 (405)
53 3axb_A Putative oxidoreductase 99.3 1.3E-10 4.4E-15 117.1 21.1 70 150-246 176-264 (448)
54 3jsk_A Cypbp37 protein; octame 99.3 2.6E-11 9.1E-16 116.2 15.0 143 42-243 78-257 (344)
55 3nrn_A Uncharacterized protein 99.3 3.7E-11 1.3E-15 120.1 16.2 36 44-79 1-36 (421)
56 2zbw_A Thioredoxin reductase; 99.3 1.7E-11 5.7E-16 118.5 13.2 126 40-243 2-127 (335)
57 4a9w_A Monooxygenase; baeyer-v 99.3 2.1E-11 7.1E-16 118.6 13.1 131 42-238 2-133 (357)
58 1qo8_A Flavocytochrome C3 fuma 99.3 5.8E-11 2E-15 123.3 16.7 161 41-242 119-317 (566)
59 2cul_A Glucose-inhibited divis 99.3 1.7E-11 5.9E-16 112.3 11.0 130 42-245 2-133 (232)
60 1c0p_A D-amino acid oxidase; a 99.3 4E-10 1.4E-14 110.2 20.6 39 40-78 3-41 (363)
61 1y0p_A Fumarate reductase flav 99.3 1.8E-10 6.2E-15 119.7 19.1 159 41-240 124-320 (571)
62 3ab1_A Ferredoxin--NADP reduct 99.3 3.3E-11 1.1E-15 117.8 12.6 125 41-243 12-137 (360)
63 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 4E-11 1.4E-15 116.4 12.8 35 44-78 2-39 (342)
64 3ces_A MNMG, tRNA uridine 5-ca 99.2 6.8E-11 2.3E-15 122.3 14.5 153 42-242 27-186 (651)
65 2zxi_A TRNA uridine 5-carboxym 99.2 1.1E-10 3.8E-15 120.2 16.0 153 42-242 26-185 (637)
66 3cp8_A TRNA uridine 5-carboxym 99.2 1.6E-10 5.4E-15 119.5 15.6 151 41-240 19-177 (641)
67 3ka7_A Oxidoreductase; structu 99.2 4.7E-10 1.6E-14 112.1 18.8 36 44-79 1-36 (425)
68 2gv8_A Monooxygenase; FMO, FAD 99.2 9.5E-11 3.3E-15 118.1 13.0 167 41-238 4-178 (447)
69 3itj_A Thioredoxin reductase 1 99.2 7.5E-11 2.6E-15 113.8 11.8 123 41-237 20-142 (338)
70 4at0_A 3-ketosteroid-delta4-5a 99.2 7.1E-10 2.4E-14 113.6 19.2 39 41-79 39-77 (510)
71 1pj5_A N,N-dimethylglycine oxi 99.2 1.8E-10 6E-15 125.0 15.0 70 150-246 146-217 (830)
72 4ap3_A Steroid monooxygenase; 99.2 1.5E-10 5E-15 119.5 13.6 139 41-237 19-159 (549)
73 3gwf_A Cyclohexanone monooxyge 99.2 2.1E-10 7.2E-15 118.1 14.1 140 41-238 6-148 (540)
74 1w4x_A Phenylacetone monooxyge 99.2 2.8E-10 9.5E-15 117.5 14.8 140 41-238 14-155 (542)
75 3f8d_A Thioredoxin reductase ( 99.2 2.5E-10 8.7E-15 109.3 13.5 112 42-237 14-125 (323)
76 3lzw_A Ferredoxin--NADP reduct 99.2 1.8E-10 6.1E-15 110.9 12.3 118 42-238 6-124 (332)
77 2gjc_A Thiazole biosynthetic e 99.1 6E-10 2.1E-14 106.2 14.1 143 42-243 64-245 (326)
78 2rgh_A Alpha-glycerophosphate 99.1 9.6E-10 3.3E-14 114.0 16.6 74 151-245 184-259 (571)
79 2xve_A Flavin-containing monoo 99.1 2.6E-10 8.9E-15 115.4 11.8 156 44-239 3-168 (464)
80 4fk1_A Putative thioredoxin re 99.1 1.9E-10 6.4E-15 109.7 10.1 36 41-76 4-39 (304)
81 1chu_A Protein (L-aspartate ox 99.1 7.6E-10 2.6E-14 113.9 15.2 38 41-79 6-43 (540)
82 3s5w_A L-ornithine 5-monooxyge 99.1 7.3E-10 2.5E-14 112.1 14.8 154 42-237 29-192 (463)
83 1kf6_A Fumarate reductase flav 99.1 8.5E-10 2.9E-14 115.0 15.4 68 155-243 134-203 (602)
84 4dgk_A Phytoene dehydrogenase; 99.1 4E-09 1.4E-13 107.7 20.1 49 189-244 236-285 (501)
85 1d4d_A Flavocytochrome C fumar 99.1 2E-09 6.9E-14 111.7 17.9 66 153-240 253-320 (572)
86 3cty_A Thioredoxin reductase; 99.1 4.2E-10 1.4E-14 107.9 11.6 114 41-238 14-127 (319)
87 3fbs_A Oxidoreductase; structu 99.1 6.3E-10 2.1E-14 105.2 12.6 112 43-238 2-113 (297)
88 3d1c_A Flavin-containing putat 99.1 7.3E-10 2.5E-14 108.4 13.4 140 42-237 3-143 (369)
89 2vvm_A Monoamine oxidase N; FA 99.1 2.9E-08 1E-12 101.1 25.6 37 43-79 39-75 (495)
90 3uox_A Otemo; baeyer-villiger 99.1 2.2E-10 7.5E-15 118.0 9.3 140 41-238 7-148 (545)
91 2wdq_A Succinate dehydrogenase 99.1 4.2E-09 1.5E-13 109.4 18.9 38 41-78 5-42 (588)
92 2q0l_A TRXR, thioredoxin reduc 99.1 8.6E-10 2.9E-14 105.2 12.7 114 44-239 2-116 (311)
93 2bs2_A Quinol-fumarate reducta 99.1 4.1E-09 1.4E-13 110.6 18.8 38 41-78 3-40 (660)
94 1vdc_A NTR, NADPH dependent th 99.1 1E-10 3.5E-15 112.8 6.1 120 41-238 6-125 (333)
95 2q7v_A Thioredoxin reductase; 99.1 1.4E-09 4.9E-14 104.5 14.1 115 41-237 6-123 (325)
96 2h88_A Succinate dehydrogenase 99.1 2.6E-09 9E-14 111.3 17.0 64 155-239 155-219 (621)
97 3gyx_A Adenylylsulfate reducta 99.1 1.8E-09 6.3E-14 113.2 15.8 171 41-239 20-235 (662)
98 1trb_A Thioredoxin reductase; 99.0 7.7E-10 2.6E-14 106.0 11.3 114 41-237 3-116 (320)
99 3lov_A Protoporphyrinogen oxid 99.0 5.4E-09 1.8E-13 106.0 18.0 62 43-105 4-82 (475)
100 2a87_A TRXR, TR, thioredoxin r 99.0 3E-10 1E-14 109.8 8.0 114 41-237 12-126 (335)
101 3k7m_X 6-hydroxy-L-nicotine ox 99.0 2.8E-09 9.4E-14 106.7 15.0 35 44-78 2-36 (431)
102 4a5l_A Thioredoxin reductase; 99.0 4.8E-10 1.6E-14 107.1 8.2 37 41-77 2-38 (314)
103 1s3e_A Amine oxidase [flavin-c 99.0 1.7E-08 5.9E-13 103.5 19.6 39 41-79 2-40 (520)
104 2e5v_A L-aspartate oxidase; ar 99.0 8.7E-09 3E-13 104.4 16.0 31 45-75 1-31 (472)
105 1fl2_A Alkyl hydroperoxide red 99.0 3.2E-09 1.1E-13 101.2 11.8 112 43-237 1-115 (310)
106 1jnr_A Adenylylsulfate reducta 98.9 3.5E-08 1.2E-12 103.7 17.7 38 41-78 20-61 (643)
107 3o0h_A Glutathione reductase; 98.9 1.5E-08 5.2E-13 103.0 14.0 34 42-75 25-58 (484)
108 1ojt_A Surface protein; redox- 98.9 5.7E-09 2E-13 106.1 10.5 38 41-78 4-41 (482)
109 1v59_A Dihydrolipoamide dehydr 98.9 3.2E-09 1.1E-13 107.8 8.5 38 41-78 3-40 (478)
110 2a8x_A Dihydrolipoyl dehydroge 98.9 1E-08 3.5E-13 103.7 12.1 33 43-75 3-35 (464)
111 4gcm_A TRXR, thioredoxin reduc 98.9 1.2E-08 4E-13 97.4 11.9 36 41-76 4-39 (312)
112 4gut_A Lysine-specific histone 98.9 7.1E-08 2.4E-12 102.9 18.6 39 42-80 335-373 (776)
113 1hyu_A AHPF, alkyl hydroperoxi 98.9 4.2E-09 1.4E-13 108.1 8.9 114 41-237 210-326 (521)
114 3nks_A Protoporphyrinogen oxid 98.8 6.5E-09 2.2E-13 105.4 9.9 36 44-79 3-40 (477)
115 4b63_A L-ornithine N5 monooxyg 98.8 1E-08 3.4E-13 104.7 9.3 65 150-235 140-212 (501)
116 3r9u_A Thioredoxin reductase; 98.8 3.4E-08 1.1E-12 94.0 11.5 111 42-235 3-116 (315)
117 1dxl_A Dihydrolipoamide dehydr 98.8 1.4E-08 4.9E-13 102.8 9.2 38 41-78 4-41 (470)
118 3l8k_A Dihydrolipoyl dehydroge 98.7 2.7E-08 9.4E-13 100.6 10.2 38 41-78 2-39 (466)
119 2ivd_A PPO, PPOX, protoporphyr 98.7 2.8E-08 9.6E-13 100.7 10.0 62 42-104 15-91 (478)
120 3g3e_A D-amino-acid oxidase; F 98.7 2.3E-09 8E-14 104.2 1.1 35 44-78 1-41 (351)
121 3urh_A Dihydrolipoyl dehydroge 98.7 8.9E-08 3E-12 97.5 12.1 38 41-78 23-60 (491)
122 1q1r_A Putidaredoxin reductase 98.7 4.4E-08 1.5E-12 98.0 9.2 36 42-77 3-40 (431)
123 3h8l_A NADH oxidase; membrane 98.6 5E-08 1.7E-12 96.9 8.2 34 44-77 2-38 (409)
124 3klj_A NAD(FAD)-dependent dehy 98.6 1.1E-07 3.7E-12 93.7 10.2 38 41-78 7-44 (385)
125 3ics_A Coenzyme A-disulfide re 98.6 1.5E-07 5.1E-12 98.1 11.5 37 42-78 35-73 (588)
126 3lxd_A FAD-dependent pyridine 98.6 9.4E-08 3.2E-12 95.1 9.3 38 41-78 7-46 (415)
127 3oc4_A Oxidoreductase, pyridin 98.6 7.5E-08 2.6E-12 97.0 8.4 35 44-78 3-39 (452)
128 1ebd_A E3BD, dihydrolipoamide 98.6 3.3E-07 1.1E-11 92.3 13.0 34 42-75 2-35 (455)
129 3iwa_A FAD-dependent pyridine 98.6 8.9E-08 3E-12 97.0 8.3 36 43-78 3-40 (472)
130 2qae_A Lipoamide, dihydrolipoy 98.6 1.3E-07 4.5E-12 95.6 9.6 36 43-78 2-37 (468)
131 2bc0_A NADH oxidase; flavoprot 98.6 1.1E-07 3.9E-12 96.7 9.0 37 42-78 34-73 (490)
132 1zmd_A Dihydrolipoyl dehydroge 98.6 1.3E-07 4.5E-12 95.8 9.4 38 41-78 4-41 (474)
133 3qfa_A Thioredoxin reductase 1 98.5 8.6E-07 3E-11 90.8 15.0 36 41-76 30-65 (519)
134 3lad_A Dihydrolipoamide dehydr 98.5 3.3E-07 1.1E-11 92.9 11.4 37 42-78 2-38 (476)
135 1mo9_A ORF3; nucleotide bindin 98.5 1.6E-06 5.3E-11 89.0 16.4 38 41-78 41-78 (523)
136 2cdu_A NADPH oxidase; flavoenz 98.5 2.1E-07 7E-12 93.7 9.5 35 44-78 1-37 (452)
137 3sx6_A Sulfide-quinone reducta 98.5 6.7E-08 2.3E-12 96.9 5.4 34 44-77 5-41 (437)
138 3dk9_A Grase, GR, glutathione 98.5 1.9E-07 6.7E-12 94.6 8.9 35 41-75 18-52 (478)
139 2hqm_A GR, grase, glutathione 98.5 9.4E-07 3.2E-11 89.6 13.5 36 41-76 9-44 (479)
140 3kd9_A Coenzyme A disulfide re 98.5 1.8E-07 6.2E-12 94.1 7.9 36 43-78 3-40 (449)
141 4dna_A Probable glutathione re 98.5 1.7E-07 5.7E-12 94.7 7.6 33 42-74 4-36 (463)
142 3ntd_A FAD-dependent pyridine 98.5 2.9E-07 9.8E-12 95.4 9.5 35 44-78 2-38 (565)
143 4gde_A UDP-galactopyranose mut 98.5 7.3E-08 2.5E-12 98.5 4.9 40 40-79 7-47 (513)
144 2yqu_A 2-oxoglutarate dehydrog 98.5 3.6E-07 1.2E-11 92.1 9.8 35 44-78 2-36 (455)
145 1xhc_A NADH oxidase /nitrite r 98.5 3.9E-07 1.3E-11 89.1 9.6 36 42-78 7-42 (367)
146 3cgb_A Pyridine nucleotide-dis 98.5 3.9E-07 1.3E-11 92.4 9.8 35 44-78 37-73 (480)
147 3fg2_P Putative rubredoxin red 98.5 3.5E-07 1.2E-11 90.6 9.2 35 44-78 2-38 (404)
148 1zk7_A HGII, reductase, mercur 98.5 6.9E-07 2.3E-11 90.3 11.5 35 41-75 2-36 (467)
149 1nhp_A NADH peroxidase; oxidor 98.5 3.4E-07 1.2E-11 92.0 9.1 35 44-78 1-37 (447)
150 3pl8_A Pyranose 2-oxidase; sub 98.5 3E-06 1E-10 88.5 16.4 39 41-79 44-82 (623)
151 2v3a_A Rubredoxin reductase; a 98.4 1E-06 3.4E-11 86.7 11.8 108 43-246 145-254 (384)
152 3ef6_A Toluene 1,2-dioxygenase 98.4 2.8E-07 9.5E-12 91.6 7.5 35 44-78 3-39 (410)
153 3k30_A Histamine dehydrogenase 98.4 1.9E-06 6.5E-11 91.4 14.3 38 41-78 389-426 (690)
154 2gqw_A Ferredoxin reductase; f 98.4 5.4E-07 1.9E-11 89.4 9.3 38 41-78 5-44 (408)
155 3ic9_A Dihydrolipoamide dehydr 98.4 1.2E-07 4.1E-12 96.5 4.4 35 42-76 7-41 (492)
156 2yqu_A 2-oxoglutarate dehydrog 98.4 1.2E-06 4.3E-11 88.1 11.6 100 43-239 167-266 (455)
157 1xdi_A RV3303C-LPDA; reductase 98.4 8.6E-07 3E-11 90.3 10.4 34 43-76 2-38 (499)
158 3h28_A Sulfide-quinone reducta 98.4 2.1E-07 7.3E-12 93.0 5.8 35 44-78 3-39 (430)
159 2eq6_A Pyruvate dehydrogenase 98.4 7.4E-07 2.5E-11 90.0 9.7 35 42-76 5-39 (464)
160 2r9z_A Glutathione amide reduc 98.4 1.1E-06 3.9E-11 88.6 10.6 35 41-75 2-36 (463)
161 1onf_A GR, grase, glutathione 98.4 5.8E-07 2E-11 91.6 7.9 34 43-76 2-35 (500)
162 2v3a_A Rubredoxin reductase; a 98.3 8.8E-07 3E-11 87.1 8.7 36 41-76 2-39 (384)
163 3dgz_A Thioredoxin reductase 2 98.3 2.3E-06 7.9E-11 86.9 12.1 36 41-76 4-39 (488)
164 3fpz_A Thiazole biosynthetic e 98.3 2.8E-07 9.6E-12 88.5 5.0 38 42-79 64-103 (326)
165 4eqs_A Coenzyme A disulfide re 98.3 1.9E-06 6.4E-11 86.3 11.2 35 44-78 1-37 (437)
166 2bcg_G Secretory pathway GDP d 98.3 3.9E-07 1.3E-11 91.7 6.3 40 41-80 9-48 (453)
167 4b1b_A TRXR, thioredoxin reduc 98.3 3.6E-06 1.2E-10 86.3 13.3 35 43-77 42-76 (542)
168 1lvl_A Dihydrolipoamide dehydr 98.3 3E-06 1E-10 85.3 12.4 34 42-75 4-37 (458)
169 3hyw_A Sulfide-quinone reducta 98.3 3.5E-07 1.2E-11 91.4 5.3 34 44-77 3-38 (430)
170 3dgh_A TRXR-1, thioredoxin red 98.3 5.8E-06 2E-10 83.8 14.2 35 41-75 7-41 (483)
171 3g5s_A Methylenetetrahydrofola 98.3 2E-06 6.8E-11 83.1 9.9 34 44-77 2-35 (443)
172 2wpf_A Trypanothione reductase 98.3 1.6E-06 5.6E-11 88.2 9.7 34 41-74 5-39 (495)
173 1y56_A Hypothetical protein PH 98.3 6E-07 2E-11 91.4 6.3 37 41-78 106-142 (493)
174 2eq6_A Pyruvate dehydrogenase 98.3 6E-06 2.1E-10 83.3 13.5 103 43-239 169-273 (464)
175 2yg5_A Putrescine oxidase; oxi 98.3 8.6E-07 2.9E-11 89.1 7.3 40 41-80 3-42 (453)
176 1sez_A Protoporphyrinogen oxid 98.3 9.4E-07 3.2E-11 90.1 7.1 62 41-103 11-87 (504)
177 1ges_A Glutathione reductase; 98.2 4.2E-06 1.4E-10 84.1 11.3 100 43-239 167-267 (450)
178 1fec_A Trypanothione reductase 98.2 1.1E-06 3.8E-11 89.3 7.0 33 42-74 2-35 (490)
179 1v0j_A UDP-galactopyranose mut 98.2 7.7E-07 2.6E-11 88.0 5.5 38 41-78 5-43 (399)
180 4g6h_A Rotenone-insensitive NA 98.2 1.9E-06 6.6E-11 87.7 8.1 37 41-77 40-76 (502)
181 3hdq_A UDP-galactopyranose mut 98.2 1.1E-06 3.6E-11 86.5 5.8 38 41-78 27-64 (397)
182 1v59_A Dihydrolipoamide dehydr 98.2 1.4E-05 4.9E-10 80.8 14.2 105 43-239 183-289 (478)
183 1rsg_A FMS1 protein; FAD bindi 98.2 1.1E-06 3.7E-11 90.0 5.6 40 41-80 6-46 (516)
184 2x8g_A Thioredoxin glutathione 98.2 1.5E-05 5.2E-10 83.0 14.2 35 41-75 105-139 (598)
185 1ebd_A E3BD, dihydrolipoamide 98.2 1.2E-05 4.1E-10 80.8 12.8 102 43-238 170-271 (455)
186 1m6i_A Programmed cell death p 98.2 2.3E-06 7.8E-11 87.1 7.5 38 41-78 9-48 (493)
187 1nhp_A NADH peroxidase; oxidor 98.2 1.1E-05 3.8E-10 80.9 12.3 99 42-238 148-247 (447)
188 2b9w_A Putative aminooxidase; 98.2 1.9E-06 6.6E-11 85.7 6.7 38 42-79 5-43 (424)
189 2gag_A Heterotetrameric sarcos 98.1 9.3E-06 3.2E-10 89.1 11.9 37 42-78 127-163 (965)
190 2e1m_A L-glutamate oxidase; L- 98.1 2E-06 6.8E-11 83.9 5.7 38 41-78 42-80 (376)
191 2jae_A L-amino acid oxidase; o 98.1 2.2E-06 7.4E-11 87.0 6.2 40 41-80 9-48 (489)
192 1ojt_A Surface protein; redox- 98.1 1.5E-05 5.2E-10 80.7 11.7 100 43-239 185-288 (482)
193 2r9z_A Glutathione amide reduc 98.1 1.4E-05 4.8E-10 80.5 11.3 101 43-239 166-266 (463)
194 3lxd_A FAD-dependent pyridine 98.1 2.5E-05 8.5E-10 77.5 12.7 107 43-245 152-261 (415)
195 3s5w_A L-ornithine 5-monooxyge 98.1 3E-05 1E-09 77.9 13.3 138 43-236 227-376 (463)
196 2qae_A Lipoamide, dihydrolipoy 98.1 4.1E-05 1.4E-09 77.2 14.1 103 43-238 174-277 (468)
197 3ef6_A Toluene 1,2-dioxygenase 98.1 1.7E-05 5.7E-10 78.7 10.8 108 43-246 143-252 (410)
198 1zmd_A Dihydrolipoyl dehydroge 98.1 4.4E-05 1.5E-09 77.1 14.1 105 43-238 178-283 (474)
199 2hqm_A GR, grase, glutathione 98.1 2.3E-05 7.7E-10 79.4 12.0 101 43-239 185-287 (479)
200 3fg2_P Putative rubredoxin red 98.0 2.8E-05 9.5E-10 76.9 12.3 108 43-246 142-252 (404)
201 3lad_A Dihydrolipoamide dehydr 98.0 4.4E-05 1.5E-09 77.1 14.0 103 42-238 179-281 (476)
202 1q1r_A Putidaredoxin reductase 98.0 2.7E-05 9.4E-10 77.6 12.3 108 43-246 149-261 (431)
203 1dxl_A Dihydrolipoamide dehydr 98.0 2.5E-05 8.6E-10 78.8 12.0 104 43-238 177-280 (470)
204 3ic9_A Dihydrolipoamide dehydr 98.0 4.7E-05 1.6E-09 77.2 14.1 103 42-238 173-275 (492)
205 3urh_A Dihydrolipoyl dehydroge 98.0 3.9E-05 1.3E-09 77.9 13.4 105 42-238 197-301 (491)
206 1onf_A GR, grase, glutathione 98.0 3.2E-05 1.1E-09 78.7 12.6 100 43-239 176-277 (500)
207 1d5t_A Guanine nucleotide diss 98.0 5.8E-06 2E-10 82.6 6.7 39 41-79 4-42 (433)
208 3iwa_A FAD-dependent pyridine 98.0 3.6E-05 1.2E-09 77.7 12.6 108 43-246 159-269 (472)
209 3q9t_A Choline dehydrogenase a 98.0 6.7E-06 2.3E-10 84.9 7.2 37 41-77 4-41 (577)
210 3vrd_B FCCB subunit, flavocyto 98.0 1.4E-05 4.7E-10 78.9 9.1 34 44-77 3-38 (401)
211 1xdi_A RV3303C-LPDA; reductase 98.0 4.3E-05 1.5E-09 77.7 13.0 101 42-239 181-281 (499)
212 4b1b_A TRXR, thioredoxin reduc 98.0 2.6E-05 8.8E-10 79.9 11.2 101 41-239 221-321 (542)
213 4dsg_A UDP-galactopyranose mut 98.0 5.2E-06 1.8E-10 84.2 5.8 38 41-78 7-45 (484)
214 1lvl_A Dihydrolipoamide dehydr 98.0 1.8E-05 6E-10 79.7 9.6 99 43-238 171-269 (458)
215 1i8t_A UDP-galactopyranose mut 98.0 4.7E-06 1.6E-10 81.4 5.1 36 44-79 2-37 (367)
216 2gqw_A Ferredoxin reductase; f 98.0 3.9E-05 1.3E-09 75.9 11.8 104 43-246 145-250 (408)
217 2a8x_A Dihydrolipoyl dehydroge 98.0 7.3E-05 2.5E-09 75.3 13.9 102 43-238 171-272 (464)
218 2bi7_A UDP-galactopyranose mut 98.0 4.7E-06 1.6E-10 81.9 4.9 37 43-79 3-39 (384)
219 3p1w_A Rabgdi protein; GDI RAB 98.0 6.1E-06 2.1E-10 82.8 5.7 40 40-79 17-56 (475)
220 1trb_A Thioredoxin reductase; 98.0 8.2E-05 2.8E-09 70.6 13.3 101 43-237 145-247 (320)
221 1ges_A Glutathione reductase; 98.0 4.9E-06 1.7E-10 83.5 4.9 35 41-75 2-36 (450)
222 3dk9_A Grase, GR, glutathione 97.9 9.2E-05 3.1E-09 74.8 14.2 103 43-237 187-293 (478)
223 2cdu_A NADPH oxidase; flavoenz 97.9 5.7E-05 1.9E-09 75.8 12.4 100 43-238 149-248 (452)
224 1fec_A Trypanothione reductase 97.9 3.5E-05 1.2E-09 78.2 10.8 100 43-239 187-290 (490)
225 3oc4_A Oxidoreductase, pyridin 97.9 6.4E-05 2.2E-09 75.4 12.5 98 43-237 147-244 (452)
226 2wpf_A Trypanothione reductase 97.9 5.2E-05 1.8E-09 77.0 11.8 100 43-239 191-294 (495)
227 3ntd_A FAD-dependent pyridine 97.9 5.9E-05 2E-09 77.9 12.5 35 44-78 152-186 (565)
228 1zk7_A HGII, reductase, mercur 97.9 5.3E-05 1.8E-09 76.3 11.7 98 43-239 176-273 (467)
229 2vdc_G Glutamate synthase [NAD 97.9 7.8E-06 2.7E-10 82.1 5.5 37 42-78 121-157 (456)
230 2iid_A L-amino-acid oxidase; f 97.9 6.9E-06 2.3E-10 83.5 4.9 40 41-80 31-70 (498)
231 3cgb_A Pyridine nucleotide-dis 97.9 4.3E-05 1.5E-09 77.3 10.5 99 42-238 185-283 (480)
232 2bc0_A NADH oxidase; flavoprot 97.9 8.1E-05 2.8E-09 75.5 11.9 99 42-238 193-292 (490)
233 1m6i_A Programmed cell death p 97.8 9.9E-05 3.4E-09 74.9 11.7 107 43-245 180-292 (493)
234 3dgh_A TRXR-1, thioredoxin red 97.8 0.00014 4.9E-09 73.5 12.9 101 43-237 187-289 (483)
235 3dgz_A Thioredoxin reductase 2 97.8 0.00022 7.6E-09 72.2 14.0 103 42-237 184-287 (488)
236 3itj_A Thioredoxin reductase 1 97.8 0.0002 6.7E-09 68.4 12.1 36 43-78 173-208 (338)
237 1b37_A Protein (polyamine oxid 97.7 2.3E-05 7.9E-10 79.1 5.5 38 42-79 3-41 (472)
238 2zbw_A Thioredoxin reductase; 97.7 0.00022 7.5E-09 68.1 12.1 35 43-77 152-186 (335)
239 1xhc_A NADH oxidase /nitrite r 97.7 0.00013 4.3E-09 71.1 10.3 35 44-78 144-178 (367)
240 3ab1_A Ferredoxin--NADP reduct 97.7 0.00018 6.1E-09 69.6 10.7 35 43-77 163-197 (360)
241 1kdg_A CDH, cellobiose dehydro 97.7 3.2E-05 1.1E-09 79.6 5.4 37 42-78 6-42 (546)
242 4dna_A Probable glutathione re 97.7 0.00024 8.2E-09 71.4 11.7 98 43-238 170-269 (463)
243 1o94_A Tmadh, trimethylamine d 97.7 3.2E-05 1.1E-09 82.4 5.3 38 41-78 387-424 (729)
244 3t37_A Probable dehydrogenase; 97.6 3.2E-05 1.1E-09 79.1 4.9 36 42-77 16-52 (526)
245 3ics_A Coenzyme A-disulfide re 97.6 0.00025 8.6E-09 73.6 11.7 97 43-238 187-283 (588)
246 1lqt_A FPRA; NADP+ derivative, 97.6 2.4E-05 8.3E-10 78.6 3.7 37 42-78 2-45 (456)
247 3d1c_A Flavin-containing putat 97.6 0.00028 9.7E-09 68.3 10.9 105 43-237 166-272 (369)
248 1fl2_A Alkyl hydroperoxide red 97.6 0.00044 1.5E-08 65.2 12.0 35 43-77 144-178 (310)
249 2q0l_A TRXR, thioredoxin reduc 97.6 0.00065 2.2E-08 64.0 13.1 35 43-77 143-177 (311)
250 3qfa_A Thioredoxin reductase 1 97.6 0.00051 1.7E-08 70.1 13.2 33 43-75 210-242 (519)
251 2z3y_A Lysine-specific histone 97.6 4.3E-05 1.5E-09 80.5 5.2 38 42-79 106-143 (662)
252 2xag_A Lysine-specific histone 97.6 5.1E-05 1.7E-09 81.6 5.7 38 42-79 277-314 (852)
253 1gpe_A Protein (glucose oxidas 97.6 8E-05 2.7E-09 77.2 7.0 38 41-78 22-60 (587)
254 3kd9_A Coenzyme A disulfide re 97.6 0.00032 1.1E-08 70.2 11.2 34 44-77 149-182 (449)
255 4eqs_A Coenzyme A disulfide re 97.6 0.0002 7E-09 71.4 9.6 36 43-78 147-182 (437)
256 1ps9_A 2,4-dienoyl-COA reducta 97.6 4.6E-05 1.6E-09 80.4 5.1 38 41-78 371-408 (671)
257 3gwf_A Cyclohexanone monooxyge 97.6 0.00069 2.3E-08 69.4 13.6 55 42-96 177-231 (540)
258 1ju2_A HydroxynitrIle lyase; f 97.5 3.2E-05 1.1E-09 79.3 3.4 37 41-78 24-60 (536)
259 1gte_A Dihydropyrimidine dehyd 97.5 7.1E-05 2.4E-09 82.7 5.7 37 42-78 186-223 (1025)
260 3cty_A Thioredoxin reductase; 97.5 0.00089 3E-08 63.4 12.3 35 43-77 155-189 (319)
261 3l8k_A Dihydrolipoyl dehydroge 97.5 0.00052 1.8E-08 69.0 11.2 36 43-78 172-207 (466)
262 1cjc_A Protein (adrenodoxin re 97.5 6.5E-05 2.2E-09 75.5 4.4 37 42-78 5-43 (460)
263 2x8g_A Thioredoxin glutathione 97.4 0.0012 4.1E-08 68.6 13.8 33 43-75 286-318 (598)
264 2q7v_A Thioredoxin reductase; 97.4 0.0014 4.9E-08 62.2 13.0 35 43-77 152-186 (325)
265 3uox_A Otemo; baeyer-villiger 97.4 0.00035 1.2E-08 71.7 9.1 55 42-96 184-238 (545)
266 3r9u_A Thioredoxin reductase; 97.4 0.0011 3.8E-08 62.3 12.0 35 43-77 147-181 (315)
267 3qvp_A Glucose oxidase; oxidor 97.4 0.00013 4.4E-09 75.3 5.6 36 41-76 17-53 (583)
268 1vdc_A NTR, NADPH dependent th 97.4 0.001 3.5E-08 63.3 11.4 36 43-78 159-194 (333)
269 3ayj_A Pro-enzyme of L-phenyla 97.4 9.2E-05 3.2E-09 77.7 3.9 37 42-78 55-100 (721)
270 2a87_A TRXR, TR, thioredoxin r 97.3 0.0012 4.1E-08 63.1 11.2 35 43-77 155-189 (335)
271 1n4w_A CHOD, cholesterol oxida 97.3 0.00017 5.9E-09 73.3 5.4 37 42-78 4-40 (504)
272 2jbv_A Choline oxidase; alcoho 97.3 0.00022 7.4E-09 73.3 6.1 37 42-78 12-49 (546)
273 3lzw_A Ferredoxin--NADP reduct 97.3 0.0012 4.3E-08 62.5 10.8 35 43-77 154-188 (332)
274 1coy_A Cholesterol oxidase; ox 97.3 0.0002 6.9E-09 72.9 5.5 38 41-78 9-46 (507)
275 1vg0_A RAB proteins geranylger 97.2 0.00038 1.3E-08 72.1 6.9 40 41-80 6-45 (650)
276 3fim_B ARYL-alcohol oxidase; A 97.2 0.00013 4.6E-09 75.0 3.4 36 43-78 2-38 (566)
277 3f8d_A Thioredoxin reductase ( 97.2 0.0025 8.4E-08 60.1 11.9 36 43-78 154-189 (323)
278 1lqt_A FPRA; NADP+ derivative, 97.2 0.0028 9.4E-08 63.5 12.6 36 43-78 147-203 (456)
279 1cjc_A Protein (adrenodoxin re 97.2 0.0048 1.6E-07 61.8 14.0 36 43-78 145-201 (460)
280 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.003 1E-07 64.3 11.7 35 43-77 355-389 (521)
281 4ap3_A Steroid monooxygenase; 97.0 0.00053 1.8E-08 70.4 5.7 55 42-96 190-244 (549)
282 3fbs_A Oxidoreductase; structu 96.9 0.0016 5.4E-08 60.7 7.6 33 43-76 141-173 (297)
283 4a5l_A Thioredoxin reductase; 96.6 0.017 5.7E-07 54.2 12.1 35 43-77 152-186 (314)
284 3klj_A NAD(FAD)-dependent dehy 96.5 0.0028 9.4E-08 62.0 5.9 37 43-79 146-182 (385)
285 1o94_A Tmadh, trimethylamine d 96.5 0.0067 2.3E-07 64.4 9.2 34 43-76 528-563 (729)
286 2gag_A Heterotetrameric sarcos 96.5 0.0089 3.1E-07 65.5 10.3 34 44-77 285-318 (965)
287 2g1u_A Hypothetical protein TM 96.3 0.0031 1.1E-07 53.0 4.4 35 43-77 19-53 (155)
288 3fwz_A Inner membrane protein 96.3 0.005 1.7E-07 50.7 5.6 36 42-77 6-41 (140)
289 1f0y_A HCDH, L-3-hydroxyacyl-C 96.3 0.0033 1.1E-07 59.2 4.9 33 44-76 16-48 (302)
290 1ps9_A 2,4-dienoyl-COA reducta 96.3 0.016 5.5E-07 60.9 10.5 28 43-70 494-521 (671)
291 1id1_A Putative potassium chan 96.2 0.0054 1.8E-07 51.3 5.4 35 42-76 2-36 (153)
292 1lss_A TRK system potassium up 96.1 0.0047 1.6E-07 50.4 4.4 33 44-76 5-37 (140)
293 1gte_A Dihydropyrimidine dehyd 96.0 0.045 1.5E-06 60.4 13.0 33 44-76 333-366 (1025)
294 3ic5_A Putative saccharopine d 96.0 0.005 1.7E-07 48.6 4.1 33 44-76 6-39 (118)
295 1w4x_A Phenylacetone monooxyge 96.0 0.0078 2.7E-07 61.6 6.5 37 42-78 185-221 (542)
296 3llv_A Exopolyphosphatase-rela 96.0 0.0075 2.6E-07 49.5 5.1 33 44-76 7-39 (141)
297 2vdc_G Glutamate synthase [NAD 96.0 0.016 5.6E-07 57.8 8.5 37 42-78 263-300 (456)
298 3sx6_A Sulfide-quinone reducta 95.9 0.039 1.3E-06 54.6 11.0 56 158-235 211-267 (437)
299 4e12_A Diketoreductase; oxidor 95.8 0.0076 2.6E-07 56.1 4.9 35 43-77 4-38 (283)
300 4gcm_A TRXR, thioredoxin reduc 95.8 0.0079 2.7E-07 56.6 4.9 36 43-78 145-180 (312)
301 3ado_A Lambda-crystallin; L-gu 95.7 0.0077 2.6E-07 56.9 4.3 34 43-76 6-39 (319)
302 3qha_A Putative oxidoreductase 95.6 0.01 3.5E-07 55.7 4.7 37 42-78 14-50 (296)
303 3h28_A Sulfide-quinone reducta 95.4 0.06 2E-06 53.1 10.1 54 157-236 202-255 (430)
304 1pzg_A LDH, lactate dehydrogen 95.4 0.013 4.3E-07 55.9 4.8 36 42-77 8-44 (331)
305 3c85_A Putative glutathione-re 95.4 0.015 5.2E-07 50.0 4.8 34 43-76 39-73 (183)
306 3k96_A Glycerol-3-phosphate de 95.4 0.016 5.6E-07 55.7 5.4 34 43-76 29-62 (356)
307 2hmt_A YUAA protein; RCK, KTN, 95.3 0.015 5.2E-07 47.5 4.4 33 44-76 7-39 (144)
308 2dpo_A L-gulonate 3-dehydrogen 95.3 0.016 5.4E-07 54.9 5.0 34 44-77 7-40 (319)
309 4a9w_A Monooxygenase; baeyer-v 95.3 0.014 4.8E-07 55.6 4.7 33 43-76 163-195 (357)
310 3i83_A 2-dehydropantoate 2-red 95.2 0.015 5.2E-07 55.1 4.7 32 44-75 3-34 (320)
311 3h8l_A NADH oxidase; membrane 95.1 0.07 2.4E-06 52.2 9.3 51 156-236 219-269 (409)
312 2ewd_A Lactate dehydrogenase,; 95.1 0.017 5.7E-07 54.7 4.5 36 42-77 3-39 (317)
313 3g0o_A 3-hydroxyisobutyrate de 95.0 0.018 6.2E-07 54.1 4.6 34 43-76 7-40 (303)
314 3hn2_A 2-dehydropantoate 2-red 95.0 0.019 6.5E-07 54.2 4.7 32 44-75 3-34 (312)
315 1bg6_A N-(1-D-carboxylethyl)-L 95.0 0.018 6E-07 55.4 4.6 34 43-76 4-37 (359)
316 3k6j_A Protein F01G10.3, confi 95.0 0.029 9.9E-07 55.7 6.1 34 44-77 55-88 (460)
317 3ghy_A Ketopantoate reductase 95.0 0.023 7.8E-07 54.2 5.2 32 44-75 4-35 (335)
318 3l4b_C TRKA K+ channel protien 95.0 0.019 6.6E-07 51.0 4.4 33 45-77 2-34 (218)
319 3tl2_A Malate dehydrogenase; c 95.0 0.021 7.3E-07 53.8 4.8 36 41-76 6-42 (315)
320 4b63_A L-ornithine N5 monooxyg 94.9 0.34 1.2E-05 48.7 14.0 36 43-78 246-283 (501)
321 3l6d_A Putative oxidoreductase 94.8 0.034 1.2E-06 52.3 5.9 36 42-77 8-43 (306)
322 2raf_A Putative dinucleotide-b 94.8 0.028 9.7E-07 49.6 4.9 35 43-77 19-53 (209)
323 1ks9_A KPA reductase;, 2-dehyd 94.7 0.028 9.5E-07 52.1 4.9 33 45-77 2-34 (291)
324 1zej_A HBD-9, 3-hydroxyacyl-CO 94.7 0.025 8.5E-07 52.8 4.5 35 41-76 10-44 (293)
325 3lk7_A UDP-N-acetylmuramoylala 94.7 0.024 8.2E-07 56.5 4.6 35 42-76 8-42 (451)
326 3mog_A Probable 3-hydroxybutyr 94.7 0.031 1.1E-06 56.1 5.3 35 43-77 5-39 (483)
327 3g17_A Similar to 2-dehydropan 94.6 0.024 8.2E-07 53.0 4.1 33 44-76 3-35 (294)
328 3dfz_A SIRC, precorrin-2 dehyd 94.6 0.038 1.3E-06 49.2 5.1 35 41-75 29-63 (223)
329 2uyy_A N-PAC protein; long-cha 94.5 0.037 1.3E-06 52.2 5.4 35 43-77 30-64 (316)
330 2ew2_A 2-dehydropantoate 2-red 94.5 0.029 1E-06 52.6 4.6 32 45-76 5-36 (316)
331 4e21_A 6-phosphogluconate dehy 94.3 0.033 1.1E-06 53.6 4.6 37 41-77 20-56 (358)
332 1t2d_A LDH-P, L-lactate dehydr 94.3 0.04 1.4E-06 52.2 5.0 35 43-77 4-39 (322)
333 2x5o_A UDP-N-acetylmuramoylala 94.3 0.029 9.9E-07 55.7 4.2 36 43-78 5-40 (439)
334 3p2y_A Alanine dehydrogenase/p 94.3 0.025 8.5E-07 54.5 3.5 35 43-77 184-218 (381)
335 4dio_A NAD(P) transhydrogenase 94.2 0.041 1.4E-06 53.5 5.0 35 43-77 190-224 (405)
336 2hjr_A Malate dehydrogenase; m 94.2 0.044 1.5E-06 52.1 5.0 34 44-77 15-49 (328)
337 3gg2_A Sugar dehydrogenase, UD 94.1 0.037 1.3E-06 55.0 4.6 34 44-77 3-36 (450)
338 2qyt_A 2-dehydropantoate 2-red 94.1 0.027 9.1E-07 53.1 3.3 31 44-74 9-45 (317)
339 3ktd_A Prephenate dehydrogenas 94.1 0.054 1.9E-06 51.7 5.4 34 43-76 8-41 (341)
340 1z82_A Glycerol-3-phosphate de 94.1 0.041 1.4E-06 52.4 4.6 36 41-76 12-47 (335)
341 3doj_A AT3G25530, dehydrogenas 94.1 0.041 1.4E-06 51.8 4.6 34 44-77 22-55 (310)
342 1y6j_A L-lactate dehydrogenase 94.0 0.048 1.6E-06 51.6 4.9 35 42-76 6-42 (318)
343 4dll_A 2-hydroxy-3-oxopropiona 94.0 0.04 1.4E-06 52.1 4.3 35 43-77 31-65 (320)
344 3dtt_A NADP oxidoreductase; st 94.0 0.045 1.5E-06 49.6 4.4 36 42-77 18-53 (245)
345 1lld_A L-lactate dehydrogenase 93.9 0.046 1.6E-06 51.6 4.6 33 44-76 8-42 (319)
346 4huj_A Uncharacterized protein 93.9 0.032 1.1E-06 49.7 3.3 34 44-77 24-58 (220)
347 2zyd_A 6-phosphogluconate dehy 93.9 0.057 1.9E-06 54.2 5.3 37 41-77 13-49 (480)
348 3g79_A NDP-N-acetyl-D-galactos 93.8 0.039 1.3E-06 55.1 4.1 35 43-77 18-54 (478)
349 1zcj_A Peroxisomal bifunctiona 93.8 0.051 1.8E-06 54.3 4.9 34 44-77 38-71 (463)
350 2vns_A Metalloreductase steap3 93.8 0.065 2.2E-06 47.5 5.1 33 44-76 29-61 (215)
351 3d1l_A Putative NADP oxidoredu 93.8 0.058 2E-06 49.4 4.9 34 43-76 10-44 (266)
352 2y0c_A BCEC, UDP-glucose dehyd 93.8 0.047 1.6E-06 54.7 4.6 34 43-76 8-41 (478)
353 3dfu_A Uncharacterized protein 93.8 0.017 5.9E-07 51.7 1.2 32 43-74 6-37 (232)
354 3ego_A Probable 2-dehydropanto 93.7 0.051 1.8E-06 51.1 4.5 32 44-76 3-34 (307)
355 3ggo_A Prephenate dehydrogenas 93.7 0.061 2.1E-06 50.7 5.0 34 43-76 33-68 (314)
356 3pef_A 6-phosphogluconate dehy 93.7 0.049 1.7E-06 50.6 4.2 34 44-77 2-35 (287)
357 3pqe_A L-LDH, L-lactate dehydr 93.7 0.051 1.7E-06 51.5 4.3 34 42-75 4-39 (326)
358 2izz_A Pyrroline-5-carboxylate 93.6 0.061 2.1E-06 50.9 4.8 36 42-77 21-60 (322)
359 3oj0_A Glutr, glutamyl-tRNA re 93.6 0.024 8.3E-07 46.7 1.8 34 43-76 21-54 (144)
360 2xve_A Flavin-containing monoo 93.5 0.054 1.9E-06 54.1 4.6 35 43-77 197-231 (464)
361 1evy_A Glycerol-3-phosphate de 93.5 0.044 1.5E-06 52.9 3.7 32 45-76 17-48 (366)
362 2gv8_A Monooxygenase; FMO, FAD 93.5 0.069 2.4E-06 53.0 5.2 36 43-78 212-248 (447)
363 4a7p_A UDP-glucose dehydrogena 93.5 0.062 2.1E-06 53.2 4.7 36 43-78 8-43 (446)
364 3cky_A 2-hydroxymethyl glutara 93.4 0.054 1.9E-06 50.6 4.1 34 43-76 4-37 (301)
365 1kyq_A Met8P, siroheme biosynt 93.4 0.032 1.1E-06 51.3 2.5 35 42-76 12-46 (274)
366 3hwr_A 2-dehydropantoate 2-red 93.4 0.061 2.1E-06 50.8 4.4 32 43-75 19-50 (318)
367 3gvi_A Malate dehydrogenase; N 93.4 0.072 2.5E-06 50.4 4.9 35 43-77 7-42 (324)
368 4ezb_A Uncharacterized conserv 93.4 0.044 1.5E-06 51.8 3.4 34 44-77 25-59 (317)
369 3pdu_A 3-hydroxyisobutyrate de 93.4 0.051 1.7E-06 50.5 3.8 33 45-77 3-35 (287)
370 1jw9_B Molybdopterin biosynthe 93.3 0.053 1.8E-06 49.3 3.7 34 43-76 31-65 (249)
371 2v6b_A L-LDH, L-lactate dehydr 93.3 0.068 2.3E-06 50.2 4.6 32 45-76 2-35 (304)
372 2rcy_A Pyrroline carboxylate r 93.3 0.071 2.4E-06 48.6 4.7 35 44-78 5-43 (262)
373 4gwg_A 6-phosphogluconate dehy 93.3 0.087 3E-06 52.7 5.5 35 43-77 4-38 (484)
374 1vpd_A Tartronate semialdehyde 93.3 0.058 2E-06 50.3 4.1 33 44-76 6-38 (299)
375 4g65_A TRK system potassium up 93.3 0.036 1.2E-06 55.3 2.7 34 44-77 4-37 (461)
376 1mo9_A ORF3; nucleotide bindin 93.3 0.095 3.2E-06 53.2 5.9 36 44-79 215-250 (523)
377 4gbj_A 6-phosphogluconate dehy 93.2 0.048 1.6E-06 51.0 3.4 35 44-78 6-40 (297)
378 3pid_A UDP-glucose 6-dehydroge 93.2 0.067 2.3E-06 52.6 4.5 34 43-77 36-69 (432)
379 3tri_A Pyrroline-5-carboxylate 93.1 0.094 3.2E-06 48.5 5.2 35 43-77 3-40 (280)
380 3c24_A Putative oxidoreductase 93.1 0.088 3E-06 48.8 5.0 33 44-76 12-45 (286)
381 2p4q_A 6-phosphogluconate dehy 93.1 0.093 3.2E-06 52.8 5.5 36 42-77 9-44 (497)
382 3qsg_A NAD-binding phosphogluc 93.1 0.063 2.2E-06 50.6 4.0 33 44-76 25-58 (312)
383 3p7m_A Malate dehydrogenase; p 93.0 0.092 3.1E-06 49.6 5.0 35 43-77 5-40 (321)
384 2iz1_A 6-phosphogluconate dehy 92.9 0.11 3.7E-06 52.1 5.6 34 43-76 5-38 (474)
385 2pv7_A T-protein [includes: ch 92.9 0.11 3.7E-06 48.6 5.2 34 44-77 22-56 (298)
386 3l9w_A Glutathione-regulated p 92.8 0.1 3.4E-06 51.3 5.1 35 43-77 4-38 (413)
387 1x13_A NAD(P) transhydrogenase 92.8 0.079 2.7E-06 51.8 4.3 35 43-77 172-206 (401)
388 1l7d_A Nicotinamide nucleotide 92.8 0.092 3.2E-06 51.0 4.7 35 43-77 172-206 (384)
389 1guz_A Malate dehydrogenase; o 92.7 0.1 3.4E-06 49.1 4.8 33 45-77 2-36 (310)
390 1txg_A Glycerol-3-phosphate de 92.7 0.073 2.5E-06 50.5 3.8 30 45-74 2-31 (335)
391 1ur5_A Malate dehydrogenase; o 92.6 0.11 3.7E-06 48.9 4.8 33 44-76 3-36 (309)
392 1mv8_A GMD, GDP-mannose 6-dehy 92.6 0.08 2.7E-06 52.4 4.1 32 45-76 2-33 (436)
393 2pgd_A 6-phosphogluconate dehy 92.5 0.13 4.4E-06 51.7 5.5 34 44-77 3-36 (482)
394 1x0v_A GPD-C, GPDH-C, glycerol 92.5 0.057 2E-06 51.7 2.8 34 44-77 9-49 (354)
395 3eag_A UDP-N-acetylmuramate:L- 92.4 0.1 3.6E-06 49.4 4.6 34 44-77 5-39 (326)
396 2h78_A Hibadh, 3-hydroxyisobut 92.4 0.09 3.1E-06 49.1 4.1 33 44-76 4-36 (302)
397 3gt0_A Pyrroline-5-carboxylate 92.3 0.14 4.7E-06 46.3 5.1 33 44-76 3-39 (247)
398 2wtb_A MFP2, fatty acid multif 92.3 0.12 4E-06 54.7 5.2 34 44-77 313-346 (725)
399 2q3e_A UDP-glucose 6-dehydroge 92.3 0.081 2.8E-06 52.9 3.7 34 44-77 6-41 (467)
400 2gf2_A Hibadh, 3-hydroxyisobut 92.3 0.13 4.3E-06 47.9 4.9 33 45-77 2-34 (296)
401 1pjc_A Protein (L-alanine dehy 92.3 0.1 3.5E-06 50.2 4.3 33 44-76 168-200 (361)
402 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.12 4.1E-06 45.4 4.4 32 45-76 2-34 (212)
403 3gpi_A NAD-dependent epimerase 92.2 0.16 5.3E-06 46.8 5.4 35 44-78 4-38 (286)
404 2f1k_A Prephenate dehydrogenas 92.2 0.12 4.2E-06 47.5 4.6 32 45-76 2-33 (279)
405 1yj8_A Glycerol-3-phosphate de 92.1 0.11 3.6E-06 50.4 4.3 33 45-77 23-62 (375)
406 2aef_A Calcium-gated potassium 92.0 0.06 2.1E-06 48.3 2.2 35 42-77 8-42 (234)
407 3ldh_A Lactate dehydrogenase; 92.0 0.16 5.6E-06 48.0 5.2 35 42-76 20-56 (330)
408 2a9f_A Putative malic enzyme ( 91.9 0.11 3.7E-06 50.1 3.9 36 41-76 186-222 (398)
409 1a5z_A L-lactate dehydrogenase 91.9 0.11 3.9E-06 49.0 4.0 32 45-76 2-35 (319)
410 2i6t_A Ubiquitin-conjugating e 91.9 0.11 3.9E-06 48.5 4.0 34 44-77 15-50 (303)
411 1yqg_A Pyrroline-5-carboxylate 91.9 0.12 4E-06 47.2 4.1 32 45-76 2-34 (263)
412 3orq_A N5-carboxyaminoimidazol 91.8 0.19 6.4E-06 48.6 5.7 36 42-77 11-46 (377)
413 2cvz_A Dehydrogenase, 3-hydrox 91.8 0.15 5E-06 47.2 4.7 31 45-76 3-33 (289)
414 4id9_A Short-chain dehydrogena 91.7 0.17 6E-06 47.9 5.3 38 41-78 17-55 (347)
415 3phh_A Shikimate dehydrogenase 91.7 0.17 5.8E-06 46.4 4.9 35 43-77 118-152 (269)
416 1pgj_A 6PGDH, 6-PGDH, 6-phosph 91.7 0.17 5.8E-06 50.7 5.3 32 45-76 3-34 (478)
417 1ez4_A Lactate dehydrogenase; 91.7 0.14 4.9E-06 48.2 4.5 35 41-75 3-39 (318)
418 1dlj_A UDP-glucose dehydrogena 91.6 0.12 4.3E-06 50.4 4.1 31 45-76 2-32 (402)
419 3ius_A Uncharacterized conserv 91.5 0.13 4.5E-06 47.3 4.0 33 44-76 6-38 (286)
420 1np3_A Ketol-acid reductoisome 91.5 0.21 7.1E-06 47.6 5.5 34 44-77 17-50 (338)
421 3e8x_A Putative NAD-dependent 91.5 0.15 5E-06 45.6 4.2 36 42-77 20-56 (236)
422 3o0h_A Glutathione reductase; 91.5 0.24 8.1E-06 49.6 6.2 101 42-239 190-290 (484)
423 1nyt_A Shikimate 5-dehydrogena 91.5 0.17 5.8E-06 46.5 4.7 34 43-76 119-152 (271)
424 1vl6_A Malate oxidoreductase; 91.5 0.13 4.4E-06 49.5 3.9 35 41-75 190-225 (388)
425 2g5c_A Prephenate dehydrogenas 91.5 0.16 5.5E-06 46.8 4.5 32 45-76 3-36 (281)
426 1oju_A MDH, malate dehydrogena 91.4 0.14 4.7E-06 47.7 4.0 32 45-76 2-35 (294)
427 1wdk_A Fatty oxidation complex 91.4 0.14 4.9E-06 53.9 4.6 34 44-77 315-348 (715)
428 2eez_A Alanine dehydrogenase; 91.3 0.15 5.2E-06 49.2 4.3 34 43-76 166-199 (369)
429 2egg_A AROE, shikimate 5-dehyd 91.2 0.19 6.4E-06 46.9 4.7 34 43-76 141-175 (297)
430 3d0o_A L-LDH 1, L-lactate dehy 91.2 0.16 5.3E-06 48.0 4.2 34 42-75 5-40 (317)
431 3don_A Shikimate dehydrogenase 91.2 0.18 6.2E-06 46.5 4.5 36 43-78 117-153 (277)
432 1ldn_A L-lactate dehydrogenase 91.1 0.17 5.8E-06 47.7 4.3 34 43-76 6-41 (316)
433 3c7a_A Octopine dehydrogenase; 91.1 0.12 4.2E-06 50.4 3.5 30 45-74 4-34 (404)
434 1hyh_A L-hicdh, L-2-hydroxyiso 91.1 0.15 5.2E-06 47.8 4.0 32 45-76 3-36 (309)
435 3nep_X Malate dehydrogenase; h 91.0 0.17 5.9E-06 47.5 4.3 33 45-77 2-36 (314)
436 3vku_A L-LDH, L-lactate dehydr 91.0 0.17 5.8E-06 47.8 4.2 34 42-75 8-43 (326)
437 4g6h_A Rotenone-insensitive NA 90.9 0.18 6E-06 50.9 4.6 36 44-79 218-267 (502)
438 2vhw_A Alanine dehydrogenase; 90.9 0.18 6E-06 48.9 4.3 34 43-76 168-201 (377)
439 4ffl_A PYLC; amino acid, biosy 90.9 0.2 6.7E-06 48.1 4.7 34 45-78 3-36 (363)
440 2hk9_A Shikimate dehydrogenase 90.8 0.19 6.4E-06 46.3 4.2 34 43-76 129-162 (275)
441 3rui_A Ubiquitin-like modifier 90.8 0.2 6.8E-06 47.4 4.4 35 42-76 33-68 (340)
442 3k5i_A Phosphoribosyl-aminoimi 90.6 0.19 6.6E-06 49.1 4.4 36 40-76 21-56 (403)
443 3vps_A TUNA, NAD-dependent epi 90.6 0.25 8.7E-06 46.0 5.1 35 43-77 7-42 (321)
444 3h8v_A Ubiquitin-like modifier 90.6 0.2 6.8E-06 46.5 4.2 35 42-76 35-70 (292)
445 3i6i_A Putative leucoanthocyan 90.6 0.25 8.7E-06 46.9 5.1 34 43-76 10-44 (346)
446 2o3j_A UDP-glucose 6-dehydroge 90.5 0.16 5.4E-06 50.9 3.8 34 44-77 10-45 (481)
447 4e4t_A Phosphoribosylaminoimid 90.5 0.28 9.7E-06 48.1 5.5 36 42-77 34-69 (419)
448 1hdo_A Biliverdin IX beta redu 90.4 0.23 8E-06 42.8 4.3 34 44-77 4-38 (206)
449 2ahr_A Putative pyrroline carb 90.4 0.22 7.4E-06 45.3 4.3 32 45-76 5-36 (259)
450 1pjq_A CYSG, siroheme synthase 90.3 0.2 6.9E-06 49.8 4.3 35 42-76 11-45 (457)
451 3dhn_A NAD-dependent epimerase 90.2 0.2 6.8E-06 44.3 3.8 35 44-78 5-40 (227)
452 1i36_A Conserved hypothetical 90.2 0.21 7.1E-06 45.5 4.0 30 45-74 2-31 (264)
453 3u62_A Shikimate dehydrogenase 90.2 0.31 1E-05 44.3 5.0 33 45-77 110-143 (253)
454 2d5c_A AROE, shikimate 5-dehyd 90.1 0.32 1.1E-05 44.4 5.2 32 45-76 118-149 (263)
455 3q2o_A Phosphoribosylaminoimid 90.1 0.32 1.1E-05 47.1 5.5 36 42-77 13-48 (389)
456 4aj2_A L-lactate dehydrogenase 90.1 0.28 9.5E-06 46.5 4.8 34 42-75 18-53 (331)
457 3ew7_A LMO0794 protein; Q8Y8U8 90.0 0.27 9.3E-06 43.0 4.5 32 45-76 2-34 (221)
458 3zwc_A Peroxisomal bifunctiona 89.9 0.23 8E-06 52.3 4.5 35 43-77 316-350 (742)
459 1p77_A Shikimate 5-dehydrogena 89.9 0.19 6.5E-06 46.2 3.5 34 43-76 119-152 (272)
460 1sez_A Protoporphyrinogen oxid 89.9 15 0.0005 36.4 17.8 34 359-398 461-494 (504)
461 2rir_A Dipicolinate synthase, 89.9 0.27 9.2E-06 45.9 4.5 35 42-76 156-190 (300)
462 3enk_A UDP-glucose 4-epimerase 89.8 0.31 1.1E-05 46.0 5.0 37 42-78 4-41 (341)
463 3vtf_A UDP-glucose 6-dehydroge 89.7 0.29 9.9E-06 48.2 4.7 33 44-76 22-54 (444)
464 3d4o_A Dipicolinate synthase s 89.7 0.28 9.7E-06 45.6 4.5 35 42-76 154-188 (293)
465 2d4a_B Malate dehydrogenase; a 89.7 0.32 1.1E-05 45.6 4.9 32 45-76 1-33 (308)
466 3k30_A Histamine dehydrogenase 89.7 0.25 8.7E-06 51.9 4.6 36 43-78 523-560 (690)
467 2yjz_A Metalloreductase steap4 89.2 0.065 2.2E-06 47.0 0.0 35 43-77 19-53 (201)
468 2r6j_A Eugenol synthase 1; phe 89.6 0.33 1.1E-05 45.4 4.9 34 44-77 12-46 (318)
469 3b1f_A Putative prephenate deh 89.5 0.25 8.5E-06 45.7 4.0 33 44-76 7-41 (290)
470 2pzm_A Putative nucleotide sug 89.5 0.32 1.1E-05 45.8 4.9 35 43-77 20-55 (330)
471 3r1i_A Short-chain type dehydr 89.5 0.27 9.4E-06 45.2 4.2 58 16-77 9-67 (276)
472 3fi9_A Malate dehydrogenase; s 89.5 0.36 1.2E-05 45.9 5.1 33 43-75 8-43 (343)
473 3ond_A Adenosylhomocysteinase; 89.5 0.33 1.1E-05 48.2 4.9 35 42-76 264-298 (488)
474 3o38_A Short chain dehydrogena 89.4 0.32 1.1E-05 44.2 4.7 35 42-76 21-57 (266)
475 4gx0_A TRKA domain protein; me 89.4 0.35 1.2E-05 49.5 5.3 35 44-78 349-383 (565)
476 4b4o_A Epimerase family protei 89.4 0.34 1.2E-05 44.8 4.8 34 45-78 2-36 (298)
477 1zud_1 Adenylyltransferase THI 89.3 0.31 1E-05 44.2 4.3 34 43-76 28-62 (251)
478 1yb4_A Tartronic semialdehyde 89.1 0.21 7.3E-06 46.2 3.2 32 45-77 5-36 (295)
479 3h2s_A Putative NADH-flavin re 89.0 0.34 1.2E-05 42.6 4.4 32 45-76 2-34 (224)
480 4fgw_A Glycerol-3-phosphate de 88.9 0.17 5.7E-06 49.0 2.4 39 40-78 31-77 (391)
481 1y7t_A Malate dehydrogenase; N 88.9 0.26 8.8E-06 46.6 3.7 34 43-76 4-45 (327)
482 3jyo_A Quinate/shikimate dehyd 88.9 0.38 1.3E-05 44.4 4.7 34 43-76 127-161 (283)
483 1b8p_A Protein (malate dehydro 88.8 0.27 9.4E-06 46.5 3.8 33 43-75 5-45 (329)
484 3tnl_A Shikimate dehydrogenase 88.5 0.39 1.3E-05 45.1 4.5 34 43-76 154-188 (315)
485 2x6t_A ADP-L-glycero-D-manno-h 88.5 0.45 1.5E-05 45.3 5.1 35 43-77 46-82 (357)
486 3ojo_A CAP5O; rossmann fold, c 88.5 0.31 1.1E-05 47.9 4.0 35 43-77 11-45 (431)
487 1edz_A 5,10-methylenetetrahydr 88.5 0.35 1.2E-05 45.3 4.2 34 42-75 176-210 (320)
488 3gvp_A Adenosylhomocysteinase 88.5 0.32 1.1E-05 47.4 4.0 35 42-76 219-253 (435)
489 3pwz_A Shikimate dehydrogenase 88.5 0.43 1.5E-05 43.8 4.7 35 42-76 119-154 (272)
490 3o8q_A Shikimate 5-dehydrogena 88.4 0.4 1.4E-05 44.2 4.5 34 43-76 126-160 (281)
491 3orf_A Dihydropteridine reduct 88.4 0.43 1.5E-05 43.0 4.7 36 43-78 22-58 (251)
492 1nvt_A Shikimate 5'-dehydrogen 88.4 0.35 1.2E-05 44.8 4.1 33 43-76 128-160 (287)
493 1y1p_A ARII, aldehyde reductas 88.4 0.51 1.7E-05 44.3 5.4 35 42-76 10-45 (342)
494 2dbq_A Glyoxylate reductase; D 88.3 0.45 1.5E-05 45.1 4.9 35 43-77 150-184 (334)
495 3h5n_A MCCB protein; ubiquitin 88.3 0.3 1E-05 46.7 3.7 34 43-76 118-152 (353)
496 1y56_A Hypothetical protein PH 88.3 0.92 3.1E-05 45.5 7.5 42 190-238 273-314 (493)
497 3ba1_A HPPR, hydroxyphenylpyru 88.3 0.57 1.9E-05 44.4 5.5 36 43-78 164-199 (333)
498 3ruf_A WBGU; rossmann fold, UD 88.2 0.12 4.2E-06 49.1 0.9 37 41-77 23-60 (351)
499 2zqz_A L-LDH, L-lactate dehydr 88.1 0.39 1.3E-05 45.4 4.3 34 42-75 8-43 (326)
500 3ce6_A Adenosylhomocysteinase; 88.0 0.46 1.6E-05 47.5 4.9 35 42-76 273-307 (494)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=7.6e-42 Score=354.48 Aligned_cols=363 Identities=31% Similarity=0.461 Sum_probs=277.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE-
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI- 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~- 119 (455)
+.++||+||||||+||++|+.|+++|++|+||||.+.+....++..+++++++.|+++ |+++.+...+.+......+.
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~~ 81 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIG-GVADEVVRADDIRGTQGDFVI 81 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHT-TCHHHHHHSCCSSCTTSCCEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHc-CCHHHHHhhCCCcccccceee
Confidence 4578999999999999999999999999999999998888889999999999999999 99999988777654433222
Q ss_pred -EeecCCCCccccccCCCcc---ccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEecc
Q 012845 120 -YCTSVTGPILGSVDHMQPQ---DFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (455)
Q Consensus 120 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 195 (455)
......+..+......... ... ...+.....++|..|.+.|.+.+.+.|+ +|++++
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~~ 141 (535)
T 3ihg_A 82 RLAESVRGEILRTVSESFDDMVAATE-PCTPAGWAMLSQDKLEPILLAQARKHGG-------------------AIRFGT 141 (535)
T ss_dssp EEESSSSSCEEEEEESCHHHHHHTTG-GGCSCCCBCCCHHHHHHHHHHHHHHTTC-------------------EEESSC
T ss_pred eEEeccCCceeeeccccccccccccc-cCCCCcccccCHHHHHHHHHHHHHhCCC-------------------EEEeCC
Confidence 2333344433311100000 000 1113335678999999999999999886 999999
Q ss_pred EEEEeeecCC----ceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccc
Q 012845 196 ECVSVSATDQ----CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLL 271 (455)
Q Consensus 196 ~v~~i~~~~~----~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (455)
+|++++.+++ ++.+++. ++.+ ..++++|+||+|||.+|.+|+++|....+..+....+.+.+.. +.... .
T Consensus 142 ~v~~i~~~~~~~~~~v~v~~~---~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~-~~~~~-~ 215 (535)
T 3ihg_A 142 RLLSFRQHDDDAGAGVTARLA---GPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDA-DLSGI-M 215 (535)
T ss_dssp EEEEEEEECGGGCSEEEEEEE---ETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEEC-CGGGT-S
T ss_pred EEEEEEECCCCccccEEEEEE---cCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEec-cChhh-c
Confidence 9999999887 7777776 4433 3589999999999999999999998877666655555444433 22221 1
Q ss_pred cCCCceEEEEEccCceEEEEeecCCCCeEEEEeecCCCC-CCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceee
Q 012845 272 NERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEV 350 (455)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (455)
...+...++++.++...++++.+. ...+.+.+...... .....++.+.+.+.+++.++......++.....|++....
T Consensus 216 ~~~~~~~~~~~~p~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (535)
T 3ihg_A 216 EPGTTGWYYLHHPEFKGTFGPTDR-PDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAARI 294 (535)
T ss_dssp CTTCCEEEEEECSSCEEEEEECSS-TTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEEE
T ss_pred cCCceEEEEEECCCceEEEEEecC-CCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEEE
Confidence 223445566667776666655443 24555555444332 3456778888899999888765555667777788888888
Q ss_pred ecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHH
Q 012845 351 AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (455)
Q Consensus 351 ~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~ 430 (455)
.+.|.. +||+|+|||||.|+|++|||+|+||+||..|+++|...+++.....+|+.|+++|+++++.+++.|+.+++.
T Consensus 295 a~~~~~--grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~ 372 (535)
T 3ihg_A 295 AERWRE--GRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYAQ 372 (535)
T ss_dssp ESCSEE--TTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccc--CCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHh
Confidence 888875 999999999999999999999999999999999999988877788999999999999999999999999987
Q ss_pred Hhc
Q 012845 431 AME 433 (455)
Q Consensus 431 ~~~ 433 (455)
++.
T Consensus 373 ~~~ 375 (535)
T 3ihg_A 373 RMA 375 (535)
T ss_dssp HTC
T ss_pred hcc
Confidence 654
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=3.3e-40 Score=338.38 Aligned_cols=339 Identities=22% Similarity=0.254 Sum_probs=246.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+++++... .+ +....+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~---~~~~~~ 83 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQR-GILPRFGEV-ET---STQGHF 83 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTT-TCGGGGCSC-CB---CCEEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHC-CCHHHHHhc-cc---cccccc
Confidence 5679999999999999999999999999999999998888889999999999999999 998877554 21 111111
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+..+ +.. ... ........++|..|.+.|.+.+.+.|+ +|+++++|+++
T Consensus 84 ----~~~~~---~~~---~~~--~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i 132 (500)
T 2qa1_A 84 ----GGLPI---DFG---VLE--GAWQAAKTVPQSVTETHLEQWATGLGA-------------------DIRRGHEVLSL 132 (500)
T ss_dssp ----TTEEE---EGG---GST--TGGGCEEEEEHHHHHHHHHHHHHHTTC-------------------EEEETCEEEEE
T ss_pred ----cceec---ccc---cCC--CCCCceeecCHHHHHHHHHHHHHHCCC-------------------EEECCcEEEEE
Confidence 11111 000 000 001124668899999999999999886 99999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEEE
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (455)
+.+++++.+++. ++++ ++++++|+||+|||.+|.||+++|..+.+..+...++...+.... .+...++
T Consensus 133 ~~~~~~v~v~~~---~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 200 (500)
T 2qa1_A 133 TDDGAGVTVEVR---GPEG-KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--------LQPRMIG 200 (500)
T ss_dssp EEETTEEEEEEE---ETTE-EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--------CCCEEEE
T ss_pred EEcCCeEEEEEE---cCCC-CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--------CCCceEE
Confidence 998888888776 5544 357899999999999999999999877665555444444332221 1222344
Q ss_pred EEccCceEEEEeecCCCCeEEEEeecCCC--CCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCC
Q 012845 281 IFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCY 358 (455)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (455)
.+.+++..++.+. ..+.+.+.+..... .......+.+.+.+.+++.++......+......|+......+.|..
T Consensus 201 ~~~~~g~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-- 276 (500)
T 2qa1_A 201 ETLPGGMVMVGPL--PGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRR-- 276 (500)
T ss_dssp EEETTEEEEEEEE--TTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCTTSEEEEEEEEECCEEECSCSEE--
T ss_pred EECCCcEEEEEEc--CCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCCccceeEEEEeccCcEEcccccc--
Confidence 5556655444444 34444444332221 12234567788888888877654333333333456666666777765
Q ss_pred CcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHH
Q 012845 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAA 431 (455)
Q Consensus 359 ~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~ 431 (455)
+||+|+|||||.++|+.|||+|+||+||..|+++|...+++.....+|+.|+++|++++..++..++.+...+
T Consensus 277 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~ 349 (500)
T 2qa1_A 277 GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLF 349 (500)
T ss_dssp TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999887766789999999999999999999887665443
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=4e-40 Score=337.64 Aligned_cols=339 Identities=22% Similarity=0.253 Sum_probs=247.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+++++... .+ +....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~---~~~~~~ 84 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQR-GILPAFGPV-ET---STQGHF 84 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHT-TCGGGGCSC-CE---ESEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHC-CCHHHHHhc-cc---ccccee
Confidence 4578999999999999999999999999999999998888889999999999999999 998877554 11 111110
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+..+.. . ... ........++|..|.+.|.+.+.+.|+ +|+++++|+++
T Consensus 85 ----~~~~~~~-~-----~~~--~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i 133 (499)
T 2qa2_A 85 ----GGRPVDF-G-----VLE--GAHYGVKAVPQSTTESVLEEWALGRGA-------------------ELLRGHTVRAL 133 (499)
T ss_dssp ----TTEEEEG-G-----GST--TCCCEEEEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEEE
T ss_pred ----cceeccc-c-----cCC--CCCCceEecCHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEE
Confidence 1111100 0 000 001124678999999999999999886 99999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEEE
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (455)
+.+++++.+++. ++++ ++++++|+||+|||.+|.||+++|..+.+..+...++...+.... .+...++
T Consensus 134 ~~~~~~v~v~~~---~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~ 201 (499)
T 2qa2_A 134 TDEGDHVVVEVE---GPDG-PRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE--------ITPRPIG 201 (499)
T ss_dssp EECSSCEEEEEE---CSSC-EEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC--------CCCEEEE
T ss_pred EEeCCEEEEEEE---cCCC-cEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC--------CCcceEE
Confidence 998888888777 5544 357899999999999999999999877665555444444333221 1222344
Q ss_pred EEccCceEEEEeecCCCCeEEEEeecCC--CCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCC
Q 012845 281 IFNTEAIGVLVAHDLKEGEFILQVPFYP--PQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCY 358 (455)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (455)
.+.+++..++++. ..+.+.+.+.... ........+.+.+.+.+++.++......+......|+......+.|..
T Consensus 202 ~~~~~g~~~~~P~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-- 277 (499)
T 2qa2_A 202 ETVPLGMVMSAPL--GDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRR-- 277 (499)
T ss_dssp EEETTEEEEEEEC--SSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEECCCEEECSCSEE--
T ss_pred EECCCeEEEEEEc--CCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCCccceeEEEEEeCCcEEcccccC--
Confidence 5556655444444 3444444433222 122334567788888888887654433333333456555566777764
Q ss_pred CcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHH
Q 012845 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAA 431 (455)
Q Consensus 359 ~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~ 431 (455)
+||+|+|||||.|+|+.|||+|+||+||..|+++|...+++.....+|+.|+++|++++..++..++.+...+
T Consensus 278 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~ 350 (499)
T 2qa2_A 278 GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLF 350 (499)
T ss_dssp TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999887767789999999999999999999887665443
No 4
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.3e-39 Score=337.92 Aligned_cols=358 Identities=29% Similarity=0.430 Sum_probs=250.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+.++||+||||||+||++|+.|+++|++|+||||.+.+....++..+++++++.|+++ |+.+.+.+.+.+........+
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~~ 102 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRW-GVAKQIRTAGWPGDHPLDAAW 102 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHT-TCHHHHHTSSCCTTSBCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CChHHHHhhcCCcccccceEE
Confidence 3468999999999999999999999999999999998888888999999999999999 999999887766533222222
Q ss_pred eecCCCCccccccCCCccc-cccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 121 CTSVTGPILGSVDHMQPQD-FEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
.....|..+...+...... ......+.....++|..|.+.|.+.+.+ . |+++++|++
T Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~---------------------~-v~~~~~v~~ 160 (549)
T 2r0c_A 103 VTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGE---------------------R-LRTRSRLDS 160 (549)
T ss_dssp ESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGG---------------------G-EECSEEEEE
T ss_pred eccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHH---------------------h-cccCcEEEE
Confidence 2223343332222111000 0000112334678999999999998876 2 789999999
Q ss_pred eeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEE
Q 012845 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (455)
Q Consensus 200 i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (455)
++.+++++.+++...++|. ..++++|+||+|||.+|.+|+++|..+.+..+.+.++...+........+ ...+...+
T Consensus 161 ~~~~~~~v~v~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (549)
T 2r0c_A 161 FEQRDDHVRATITDLRTGA--TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLL-GERAALFF 237 (549)
T ss_dssp EEECSSCEEEEEEETTTCC--EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHH-GGGCCSEE
T ss_pred EEEeCCEEEEEEEECCCCC--EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhc-CCCCceEE
Confidence 9998888887776222242 34789999999999999999999988777666655554444432221111 11233445
Q ss_pred EEEccC-ceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCC
Q 012845 280 FIFNTE-AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCY 358 (455)
Q Consensus 280 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (455)
+++.++ ...++++.+ ....|.+.++... .. ++.+.+.+.+++.++... ..++.....|++.....+.|..
T Consensus 238 ~~~~p~~~~~~~~p~~-~~~~~~~~~~~~~--~~---~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~-- 308 (549)
T 2r0c_A 238 FLMLSSSLRFPLRALD-GRGLYRLTVGVDD--AS---KSTMDSFELVRRAVAFDT-EIEVLSDSEWHLTHRVADSFSA-- 308 (549)
T ss_dssp EEEEETTEEEEEEESS-SSSEEEEEEECST--TC---CSCCCHHHHHHHHBCSCC-CCEEEEEEEEEECCEECSCSEE--
T ss_pred EEECCCCcEEEEEEEC-CCcEEEEEecCCC--CC---CCHHHHHHHHHHHhCCCC-ceeEEEEecchhHhhhHHhhcC--
Confidence 555555 444444443 2345555543221 11 455667778888776532 2355566678877777777764
Q ss_pred CcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHHhc
Q 012845 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAME 433 (455)
Q Consensus 359 ~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 433 (455)
+||+|+|||||.++|+.|||+|+||+||..|+++|...+++.....+|+.|+++|+++++.+++.|+.++..++.
T Consensus 309 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~ 383 (549)
T 2r0c_A 309 GRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMD 383 (549)
T ss_dssp TTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHHHHHHHHC----------
T ss_pred CcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999988777778999999999999999999999988876653
No 5
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=9.4e-40 Score=339.33 Aligned_cols=345 Identities=24% Similarity=0.301 Sum_probs=244.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
.+++||+||||||+||++|+.|+++|++|+||||.+.+....++..|+++++++|+++ |+++.+...+....... +
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~l-Gl~~~l~~~~~~~~~~~-~-- 122 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLR-GLLDRFLEGTQVAKGLP-F-- 122 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTT-TCHHHHTTSCCBCSBCC-B--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHc-CChHHHHhcCcccCCce-e--
Confidence 4578999999999999999999999999999999998888899999999999999999 99999977654332100 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+......+. .... ........+++..|.+.|.+.+.+.|+ +|+++++|+++
T Consensus 123 ----~~~~~~~~~~---~~~~--~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~l 174 (570)
T 3fmw_A 123 ----AGIFTQGLDF---GLVD--TRHPYTGLVPQSRTEALLAEHAREAGA-------------------EIPRGHEVTRL 174 (570)
T ss_dssp ----TTBCTTCCBG---GGSC--CSCCSBBCCCHHHHHHHHHHHHHHHTE-------------------ECCBSCEEEEC
T ss_pred ----CCcccccccc---cccC--CCCCeeEEeCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 1110000000 0000 011124568999999999999999886 99999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEEE
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (455)
+.+++++.+++.. .+|. .++++|+||+|||.+|.+|+++|..+.+..+....+.......... .+ ..+
T Consensus 175 ~~~~~~v~v~~~~-~~G~---~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~------~~--~~~ 242 (570)
T 3fmw_A 175 RQDAEAVEVTVAG-PSGP---YPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE------VP--RRW 242 (570)
T ss_dssp CBCSSCEEEEEEE-TTEE---EEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS------SC--CCC
T ss_pred EEcCCeEEEEEEe-CCCc---EEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC------cc--eEE
Confidence 9988888887741 1331 3789999999999999999999988877776666555443322211 01 111
Q ss_pred EEccCceEEEEeecCCCC---eEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEE-EeeceEeceeeeccccc
Q 012845 281 IFNTEAIGVLVAHDLKEG---EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFLC 356 (455)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 356 (455)
.+.+.+..++ .+|...+ ++.+..+...........+.+.+.+.+++.++......+.. ....|++.....+.|..
T Consensus 243 ~~~~~G~~~~-~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 321 (570)
T 3fmw_A 243 ERTPDGILVL-AFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRS 321 (570)
T ss_dssp CCCCSSCEEE-CCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSEE
T ss_pred EecCCEEEEE-EeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeeccccccccccc
Confidence 2333333322 1344434 34444432222233445667777777777666544433333 34456666677777775
Q ss_pred CCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHHh
Q 012845 357 CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAM 432 (455)
Q Consensus 357 ~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~ 432 (455)
+||+|+|||||.++|++|||+|+||+||..|+++|.+.+++.....+|+.|+++|+++...++..++.+...+.
T Consensus 322 --grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 322 --GRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMR 395 (570)
T ss_dssp --TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred --CCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998877778899999999999999999999987765544
No 6
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.6e-38 Score=334.23 Aligned_cols=359 Identities=22% Similarity=0.308 Sum_probs=243.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-----CCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCccccc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK-----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWR 116 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~-----~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~ 116 (455)
.++||+||||||+||++|+.|++ .|++|+||||.+.+...+++..|+++++++|+++ |+++.+...+.+.....
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~l-Gl~~~l~~~~~~~~~~~ 85 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNL-GLADKILSEANDMSTIA 85 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTT-TCHHHHHTTCBCCCEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHC-CCHHHHHHhccccceEE
Confidence 46899999999999999999999 9999999999988888889999999999999999 99999987666543221
Q ss_pred ceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcc---cccccCCCcccccccccccceEEe
Q 012845 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLN---FKICTSEGTEGLHNHLLQGREILM 193 (455)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~i~~ 193 (455)
. +.....+........ ... ...........++|..|++.|++.+.+.| + +|++
T Consensus 86 ~--~~~~~~g~i~~~~~~-~~~--~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v-------------------~v~~ 141 (665)
T 1pn0_A 86 L--YNPDENGHIRRTDRI-PDT--LPGISRYHQVVLHQGRIERRILDSIAEISDTRI-------------------KVER 141 (665)
T ss_dssp E--EEECTTSCEEEEEEE-ESS--CTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS-------------------CEEC
T ss_pred E--EeCCCCcceEeeccc-Ccc--cCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce-------------------EEEe
Confidence 1 111212222110000 000 00011223466899999999999999887 5 8999
Q ss_pred ccEEEEeeecC--------CceEEEEEecc--------------C-----------------------CcceeEEEEeCE
Q 012845 194 GHECVSVSATD--------QCINVIASFLK--------------E-----------------------GKCTERNIQCNI 228 (455)
Q Consensus 194 ~~~v~~i~~~~--------~~~~v~~~~~~--------------~-----------------------g~~~~~~~~~d~ 228 (455)
+++|++++.++ ..+.+++.... + ..+..+++++|+
T Consensus 142 g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~ 221 (665)
T 1pn0_A 142 PLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKY 221 (665)
T ss_dssp SEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEE
T ss_pred CCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCE
Confidence 99999998764 35666665210 0 122235789999
Q ss_pred EEeecCCCchhhhhcCCCccCCcccceeEEEEEec-CCcccccccCCCceEEEEEccCceEEEEeecCCCCeEEEEeecC
Q 012845 229 LIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFY 307 (455)
Q Consensus 229 vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (455)
||+|||.+|.||+++|..+.+..+...+....... ...+ ......+....+.+..++++. ..+.+.+.+.+.
T Consensus 222 VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p-----~~~~~~~~~~~~~g~~~~~P~--~~~~~r~~~~~~ 294 (665)
T 1pn0_A 222 VIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFP-----DIRSRCAIHSAESGSIMIIPR--ENNLVRFYVQLQ 294 (665)
T ss_dssp EEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCT-----TTTSEEEEECSSSCEEEEEEC--STTCEEEEEEEC
T ss_pred EEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCC-----CcceEEEEEeCCCceEEEEEc--CCCEEEEEEEeC
Confidence 99999999999999998766554433332222211 1111 111122222223444444444 334333333322
Q ss_pred CCC-----CCCCCCCHHHHHHHHHHhhCCCCCCee-EEEeeceEeceeeecccccCCCcEEEEcCccccCCCCcCccchh
Q 012845 308 PPQ-----QNLEDFSPEICEKLIFKLVGWELSDID-VIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNT 381 (455)
Q Consensus 308 ~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~ 381 (455)
... ......+.+.+.+.+++.++....... +.....|++..+..+.|.. .+||+|+|||||.++|+.|||||+
T Consensus 295 ~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~-~gRV~L~GDAAH~~~P~~GqG~N~ 373 (665)
T 1pn0_A 295 ARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTAYHIGQRVTEKFSK-DERVFIAGDACHTHSPKAGQGMNT 373 (665)
T ss_dssp C----------CCCCHHHHHHHHHHHHTTSCCEEEEEEEEEEEEEEEEECSCSEE-TTTEEECGGGTEECCSTTCCHHHH
T ss_pred CccccccccCcCCCCHHHHHHHHHHHhCcccCceeeEEEEEeeeccceehhhccc-CCCEEEEECccccCCCcccCCcch
Confidence 211 123456777788878777653221221 2222344555566777751 399999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHHhc
Q 012845 382 GVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAME 433 (455)
Q Consensus 382 Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 433 (455)
||+||..|+++|...+++.....+|+.|+++|+++++.++..++.+.+.+..
T Consensus 374 gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~ 425 (665)
T 1pn0_A 374 SMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLFSG 425 (665)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999988877778999999999999999999999887776653
No 7
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=7.9e-39 Score=320.44 Aligned_cols=354 Identities=22% Similarity=0.204 Sum_probs=211.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC--CcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH--PQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~--~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
.+|+||||||+||++|+.|+++|++|+||||.+.+... +.++.+.+++++.|+++ |+.+.+................
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~l-g~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQEC-LPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHH-SCHHHHHHHHHHCEEECCCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHc-CChHHHHHhhhhhcccCcceeE
Confidence 47999999999999999999999999999999887655 45667889999999999 8887664321111000000011
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
....+............. ..........+.|..|.+.|.+.+.. .|+++++|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~R~~L~~~L~~~~~~----------------------~v~~~~~v~~~~ 136 (412)
T 4hb9_A 81 YNERMRLLAVHGGISPMA--GKIISEQRLSISRTELKEILNKGLAN----------------------TIQWNKTFVRYE 136 (412)
T ss_dssp ECTTSCEEEC----------------CEEEEEHHHHHHHHHTTCTT----------------------TEECSCCEEEEE
T ss_pred ecCCcceecccCCccccc--cccccccceEeeHHHHHHHHHhhccc----------------------eEEEEEEEEeee
Confidence 111222221111111000 00112224567899999988765422 789999999998
Q ss_pred ecCC-ceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCC-cccc-cccCCCceE
Q 012845 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKD-LGDY-LLNERPGML 278 (455)
Q Consensus 202 ~~~~-~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 278 (455)
..++ .+.+++. +|+ ++++|+||+|||.+|.||++++............+........ .... .........
T Consensus 137 ~~~~~~v~v~~~---dG~----~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (412)
T 4hb9_A 137 HIENGGIKIFFA---DGS----HENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTP 209 (412)
T ss_dssp ECTTSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCC
T ss_pred EcCCCeEEEEEC---CCC----EEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCc
Confidence 7554 5667766 776 7899999999999999999997655443333222222221110 0000 000011111
Q ss_pred EEEEccCceEEE---Eeec---------CCCCeEEEEe---ecCCCCCCCCCCCHHHHHHHHHHhhC-CCCCCeeE----
Q 012845 279 FFIFNTEAIGVL---VAHD---------LKEGEFILQV---PFYPPQQNLEDFSPEICEKLIFKLVG-WELSDIDV---- 338 (455)
Q Consensus 279 ~~~~~~~~~~~~---~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~---- 338 (455)
...........+ +..+ .....+.+.+ ..........+++.+.+.+.+.+.+. |.+....+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~ 289 (412)
T 4hb9_A 210 NSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQS 289 (412)
T ss_dssp EEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTS
T ss_pred ceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhc
Confidence 111111111110 1111 1111222211 11222234456666666666665443 22111000
Q ss_pred --EEeeceEece-eeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCC-CchhhhhHHHhhh
Q 012845 339 --IDIKPWVMHA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERK 414 (455)
Q Consensus 339 --~~~~~~~~~~-~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~-~~~al~~Y~~~r~ 414 (455)
....++.... .....|. .+||+|||||||.|+|+.|||+|+||+||..|+++|.+..++.. ...+|+.|+++|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~ 367 (412)
T 4hb9_A 290 DMENISPLHLRSMPHLLPWK--SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMR 367 (412)
T ss_dssp CTTCCEEEEEEECCCCCCCC--CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred ccceeccchhcccccccccc--ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH
Confidence 0111222221 2233444 49999999999999999999999999999999999999876543 4789999999999
Q ss_pred HHHHHhHHhHHHHHHHH
Q 012845 415 PIAEFNTALSVQNFRAA 431 (455)
Q Consensus 415 ~~~~~~~~~s~~~~~~~ 431 (455)
++++.+++.|+++...+
T Consensus 368 ~~~~~~~~~s~~~~~~~ 384 (412)
T 4hb9_A 368 AYANEIVGISLRSAQNA 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887643
No 8
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=3.3e-38 Score=316.26 Aligned_cols=342 Identities=16% Similarity=0.169 Sum_probs=225.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++++||+||||||+||++|+.|+++|++|+||||.+.+...++++.+.+++++.|+++ |+++.+...+.+... ..+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~l-g~~~~~~~~~~~~~~---~~~ 96 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHL-GMGDIMETFGGPLRR---MAY 96 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHT-TCHHHHHHHSCCCCE---EEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHC-CCHHHHHhhcCCCcc---eEE
Confidence 4579999999999999999999999999999999998888889999999999999999 999999887765532 222
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.....|..+...+... ... ........++|..|.+.|.+.+.+ + +|+++++|+++
T Consensus 97 ~~~~~g~~~~~~~~~~---~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v~~i 151 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAP---LIE-RTGSRPCPVSRAELQREMLDYWGR--D-------------------SVQFGKRVTRC 151 (407)
T ss_dssp EETTTCCEEEEEECHH---HHH-HHSSCCEEEEHHHHHHHHHHHHCG--G-------------------GEEESCCEEEE
T ss_pred EECCCCCEeEEecchh---hhh-hcCCceEEEEHHHHHHHHHHhCCc--C-------------------EEEECCEEEEE
Confidence 2222244333322110 000 001235678999999999999877 4 89999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhc-CCCccCCcccceeEEEEEecCCcccccccCCCceEE
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV-GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (455)
+.+++++.+++. +|+ ++++|+||+|||.+|.+|+++ +............+........ .......+.
T Consensus 152 ~~~~~~v~v~~~---~g~----~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 219 (407)
T 3rp8_A 152 EEDADGVTVWFT---DGS----SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDE-----ALAPGDQWT 219 (407)
T ss_dssp EEETTEEEEEET---TSC----EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCT-----TTCCTTEEE
T ss_pred EecCCcEEEEEc---CCC----EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccc-----ccCCCCceE
Confidence 998888887776 665 789999999999999999999 6432221111111111111111 011223333
Q ss_pred EEEccCceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhC-CCCC---------CeeEEEeeceEecee
Q 012845 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVG-WELS---------DIDVIDIKPWVMHAE 349 (455)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~---------~~~~~~~~~~~~~~~ 349 (455)
.++.+++..+++ |...+...+.+....+... ..+.+...+.+.+.+. +... .........++. .
T Consensus 220 ~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 293 (407)
T 3rp8_A 220 TFVGEGKQVSLM--PVSAGRFYFFFDVPLPAGL--AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDI--E 293 (407)
T ss_dssp EEEETTEEEEEE--EETTTEEEEEEEEECCTTC--SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEEC--C
T ss_pred EEECCCcEEEEE--EcCCCeEEEEEEeCCCcCC--CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEec--C
Confidence 444555554444 4445555555443222211 1122223333333322 2110 001111111222 1
Q ss_pred eecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHH
Q 012845 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (455)
Q Consensus 350 ~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~ 429 (455)
....|.. +||+|||||||.++|++|||+|+||+||..|+++|.+. + +...+|+.|++.|++++..+++.|+...+
T Consensus 294 ~~~~~~~--~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~--~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 368 (407)
T 3rp8_A 294 PFSRLVR--GRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT--R-DIAAALREYEAQRCDRVRDLVLKARKRCD 368 (407)
T ss_dssp CCSCCEE--TTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceec--CCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2255553 89999999999999999999999999999999999853 2 56789999999999999999999999988
Q ss_pred HHhcc
Q 012845 430 AAMEV 434 (455)
Q Consensus 430 ~~~~~ 434 (455)
.++..
T Consensus 369 ~~~~~ 373 (407)
T 3rp8_A 369 ITHGK 373 (407)
T ss_dssp HHTTT
T ss_pred hhhcC
Confidence 77643
No 9
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=2.1e-37 Score=326.65 Aligned_cols=352 Identities=22% Similarity=0.309 Sum_probs=234.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
..++||+||||||+||++|+.|++ .|++|+||||.+.+...+++..++++++++|+++ |+.+.+...+.+.... .
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~l-Gl~~~~~~~~~~~~~~---~ 105 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAF-EFADSILKEACWINDV---T 105 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHT-TCHHHHHHHSEEECEE---E
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CcHHHHHHhcccccce---E
Confidence 457899999999999999999999 9999999999998888889999999999999999 9999987765443221 1
Q ss_pred EeecC---CCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccE
Q 012845 120 YCTSV---TGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHE 196 (455)
Q Consensus 120 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 196 (455)
+.... .+........ .... ..........++|..|.+.|.+.+.+.|+. ++|+++++
T Consensus 106 ~~~~~~~~~g~~~~~~~~-~~~~--~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~-----------------v~v~~~~~ 165 (639)
T 2dkh_A 106 FWKPDPGQPGRIARHGRV-QDTE--DGLSEFPHVILNQARVHDHYLERMRNSPSR-----------------LEPHYARR 165 (639)
T ss_dssp EEEECTTSTTCEEEEEEE-ESSC--TTSCSSCEEECCHHHHHHHHHHHHHHSTTC-----------------CCCBCSEE
T ss_pred EECCCCCCCcceEeeccc-Cccc--CCCCCCceEeeCHHHHHHHHHHHHHhCCCC-----------------cEEecCCE
Confidence 11110 1221110000 0000 000122245689999999999999998731 38999999
Q ss_pred EEEeeecCC----ceEEEEEec---cCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEec-CCccc
Q 012845 197 CVSVSATDQ----CINVIASFL---KEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGD 268 (455)
Q Consensus 197 v~~i~~~~~----~~~v~~~~~---~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 268 (455)
|++++.+++ .+.+++... .+|. ..++++|+||+|||.+|.||+++|....+..+...+....... ...+
T Consensus 166 v~~l~~~~~~~~~~v~v~~~~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p- 242 (639)
T 2dkh_A 166 VLDVKVDHGAADYPVTVTLERCDAAHAGQ--IETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFP- 242 (639)
T ss_dssp EEEEEECTTCSSCCEEEEEEECSGGGTTC--EEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCT-
T ss_pred EEEEEECCCCCcCCEEEEEEeccccCCCC--eEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCC-
Confidence 999988653 466665520 1232 3478999999999999999999998766555444333322211 1111
Q ss_pred ccccCCCceEEEEEccCceEEEEeecCCCC-eEEEEeecCC--CC--CCCCCCCHHHHHHHHHHhhCCCCCCeeEEEe--
Q 012845 269 YLLNERPGMLFFIFNTEAIGVLVAHDLKEG-EFILQVPFYP--PQ--QNLEDFSPEICEKLIFKLVGWELSDIDVIDI-- 341 (455)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 341 (455)
.......+.. +.+..+++ |...+ .+.+.+.... .. ......+.+.+.+.+++.++.. ..++...
T Consensus 243 ----~~~~~~~~~~-~~g~~~~~--P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~ 313 (639)
T 2dkh_A 243 ----DVRYKVAIQS-EQGNVLII--PREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPY--KLEVKNVPW 313 (639)
T ss_dssp ----TTTSEEEEEE-TTEEEEEE--ECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTS--CEEEEEEEE
T ss_pred ----ccceeEEEEc-CCceEEEE--EcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcc--cCcceeeeE
Confidence 1111222222 44444443 33333 3333332221 11 1233456777777777766532 1222222
Q ss_pred -eceEeceeeecccc----------cCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHH
Q 012845 342 -KPWVMHAEVAEKFL----------CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYE 410 (455)
Q Consensus 342 -~~~~~~~~~~~~~~----------~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~ 410 (455)
..|++..+..+.|. ...+||+|+|||||.++|+.|||+|+||+||..|+++|...+++.....+|+.|+
T Consensus 314 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye 393 (639)
T 2dkh_A 314 WSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYS 393 (639)
T ss_dssp EEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHH
T ss_pred EEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 23333445555654 0149999999999999999999999999999999999999887767788999999
Q ss_pred HhhhHHHHHhHHhHHHHH
Q 012845 411 TERKPIAEFNTALSVQNF 428 (455)
Q Consensus 411 ~~r~~~~~~~~~~s~~~~ 428 (455)
++|+++++.+++.++.+.
T Consensus 394 ~eR~~~a~~~~~~s~~~~ 411 (639)
T 2dkh_A 394 SERQVVAQQLIDFDREWA 411 (639)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887543
No 10
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=4.9e-37 Score=306.70 Aligned_cols=352 Identities=16% Similarity=0.142 Sum_probs=223.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF-STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~-~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
+.++||+||||||+||++|+.|+++|++|+||||.+.+ ...+++..+.+++++.|+.+ |+.+ .....+.. ...
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~-g~~~--~~~~~~~~---~~~ 76 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQ-GVEL--DSISVPSS---SME 76 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHT-TCCG--GGTCBCCC---EEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHc-CCcc--cccccccc---ceE
Confidence 45689999999999999999999999999999999775 44567888999999999999 8876 33333321 111
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
+.....|..+...+. + ...+.+..|.+.|.+.+ .|+ +|+++++|++
T Consensus 77 ~~~~~~g~~~~~~~~-----------~--~~~~~~~~l~~~L~~~~--~~~-------------------~i~~~~~v~~ 122 (397)
T 2vou_A 77 YVDALTGERVGSVPA-----------D--WRFTSYDSIYGGLYELF--GPE-------------------RYHTSKCLVG 122 (397)
T ss_dssp EEETTTCCEEEEEEC-----------C--CCEEEHHHHHHHHHHHH--CST-------------------TEETTCCEEE
T ss_pred EEecCCCCccccccC-----------c--ccccCHHHHHHHHHHhC--CCc-------------------EEEcCCEEEE
Confidence 211113333221110 1 12356778888888775 244 8999999999
Q ss_pred eeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecC-CcccccccCCCceE
Q 012845 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK-DLGDYLLNERPGML 278 (455)
Q Consensus 200 i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 278 (455)
++.+++++.+++. +|+ ++++|+||+|||.+|.+|++++ +.. ..+............ ..............
T Consensus 123 i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vr~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (397)
T 2vou_A 123 LSQDSETVQMRFS---DGT----KAEANWVIGADGGASVVRKRLL-GIE-PTYAGYVTWRGVLQPGEVADDVWNYFNDKF 193 (397)
T ss_dssp EEECSSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHH-CCC-CEEEEEEEEEEEECTTSSCHHHHHHHTTEE
T ss_pred EEecCCEEEEEEC---CCC----EEECCEEEECCCcchhHHHHhc-cCC-CCccceEEEEEEeeccccChhhhhhhcCce
Confidence 9988888877765 665 7899999999999999999997 432 222111111111211 11110000001122
Q ss_pred EEEEccCceEEEEeecCCCC----e--EEEEeecCCCC--C-CC--------------CCCCHHHHHHHHHHhhC-CCCC
Q 012845 279 FFIFNTEAIGVLVAHDLKEG----E--FILQVPFYPPQ--Q-NL--------------EDFSPEICEKLIFKLVG-WELS 334 (455)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~--~-~~--------------~~~~~~~~~~~l~~~~~-~~~~ 334 (455)
.+...+++...+++.+...+ . +.|..+..... . .. ...+++.+.+++..+.. +..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (397)
T 2vou_A 194 TYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP- 272 (397)
T ss_dssp EEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-
T ss_pred eEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-
Confidence 33334444444444443322 2 34443322100 0 00 00133444444433321 111
Q ss_pred CeeEE----EeeceEeceeeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHH
Q 012845 335 DIDVI----DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYE 410 (455)
Q Consensus 335 ~~~~~----~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~ 410 (455)
..+++ ....+++.....+.|.. +||+|||||||.|+|+.|||+|+||+||..|+++|.. ..+...+|+.|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~--grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~~Ye 347 (397)
T 2vou_A 273 FRDLVLNASSPFVTVVADATVDRMVH--GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQSWE 347 (397)
T ss_dssp HHHHHHHCSSCEEEEEEEBCCSCSEE--TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHHHHH
T ss_pred HHHHHhccCCcceeeeeeecCCceec--CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHHHHH
Confidence 00100 01123444334455654 9999999999999999999999999999999999975 334578999999
Q ss_pred HhhhHHHHHhHHhHHHHHHHHhccccccCCCcccccc
Q 012845 411 TERKPIAEFNTALSVQNFRAAMEVPSALGLDPTIANS 447 (455)
Q Consensus 411 ~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 447 (455)
++|++++..++..|+.....++..+...-.|++.+..
T Consensus 348 ~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~~ 384 (397)
T 2vou_A 348 TRQLQQGHAYLNKVKKMASRLQHGGSFEPGNPAFAFG 384 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCCCTTCGGGSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCChhHhcc
Confidence 9999999999999999988887665566666666643
No 11
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-37 Score=311.53 Aligned_cols=340 Identities=19% Similarity=0.206 Sum_probs=230.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
.++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+.+++.+.|+++ |+++.+.....+.... .+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~~---~~~ 80 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAA-GLLAEVTRRGGRVRHE---LEV 80 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHT-TCHHHHHHTTCEEECE---EEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHc-CcHHHHHHhCCCccee---EEE
Confidence 468999999999999999999999999999999988777888999999999999999 9999887655443221 111
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceEEeccEEEEe
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
...|......+.... ..+.....++|..|.+.|.+.+.+. |+ +|+++++|+++
T Consensus 81 -~~~g~~~~~~~~~~~------~~~~~~~~~~r~~l~~~L~~~~~~~~gv-------------------~i~~~~~v~~i 134 (399)
T 2x3n_A 81 -YHDGELLRYFNYSSV------DARGYFILMPCESLRRLVLEKIDGEATV-------------------EMLFETRIEAV 134 (399)
T ss_dssp -EETTEEEEEEETTSS------CGGGCEEECCHHHHHHHHHHHHTTCTTE-------------------EEECSCCEEEE
T ss_pred -eCCCCEEEecchHHh------cccCccccccHHHHHHHHHHHhhhcCCc-------------------EEEcCCEEEEE
Confidence 112322221111100 0012246789999999999999987 76 99999999999
Q ss_pred eecCCce--EEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCC--cccc--eeEEEEEecCCcccccccCC
Q 012845 201 SATDQCI--NVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGE--KDLQ--KLVSVHFLSKDLGDYLLNER 274 (455)
Q Consensus 201 ~~~~~~~--~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~ 274 (455)
+.+++++ .+++. +|+ ++++|+||+|||.+|.+|+.++...... .+.+ ..+.. ...... + .
T Consensus 135 ~~~~~~v~g~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~-~~~~~~-----~-~ 200 (399)
T 2x3n_A 135 QRDERHAIDQVRLN---DGR----VLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFA-LAPCVA-----E-R 200 (399)
T ss_dssp EECTTSCEEEEEET---TSC----EEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEE-CCHHHH-----H-C
T ss_pred EEcCCceEEEEEEC---CCC----EEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEE-EecCCC-----C-C
Confidence 9888877 67665 665 7899999999999999999998665433 2222 22221 111110 1 1
Q ss_pred CceEEEEEcc-CceEEEEeecCCCCeEEEEeecCCCC-CCC-CCCCHHHHHHHHHHhhCCCC--CCeeEE---EeeceEe
Q 012845 275 PGMLFFIFNT-EAIGVLVAHDLKEGEFILQVPFYPPQ-QNL-EDFSPEICEKLIFKLVGWEL--SDIDVI---DIKPWVM 346 (455)
Q Consensus 275 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~--~~~~~~---~~~~~~~ 346 (455)
. . ..+.+ ++..++++.+ ...+.|.+...... ... ...+.+.+.+.+..+ .... ..++.. ....|++
T Consensus 201 ~--~-~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 274 (399)
T 2x3n_A 201 N--R-LYVDSQGGLAYFYPIG--FDRARLVVSFPREEARELMADTRGESLRRRLQRF-VGDESAEAIAAVTGTSRFKGIP 274 (399)
T ss_dssp E--E-EEECTTSCEEEEEEET--TTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTT-CCGGGHHHHHTCCCSTTCEECC
T ss_pred c--c-EEEcCCCcEEEEEEcC--CCEEEEEEEeCccccccccccCCHHHHHHHHhhc-CCcchhhHHhcCCccceEEech
Confidence 1 2 44555 5555554443 36666665321110 000 012334455555432 1111 111111 1123444
Q ss_pred ce-eeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHc-CCCCchhhhhHHHhhhHHHHHhHHhH
Q 012845 347 HA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALS 424 (455)
Q Consensus 347 ~~-~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~-~~~~~~al~~Y~~~r~~~~~~~~~~s 424 (455)
.. ...+.|.. +||+|||||||.|+|++|||+|+||+||..|+++|.+.++ +.+...+|+.|++.|++++..++..+
T Consensus 275 ~~~~~~~~~~~--~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s 352 (399)
T 2x3n_A 275 IGYLNLDRYWA--DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYG 352 (399)
T ss_dssp CCCEECSCSEE--TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccc--CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHH
Confidence 44 45556654 9999999999999999999999999999999999998775 33457899999999999999999999
Q ss_pred HHHHHHHhc
Q 012845 425 VQNFRAAME 433 (455)
Q Consensus 425 ~~~~~~~~~ 433 (455)
+.+.+.++.
T Consensus 353 ~~~~~~~~~ 361 (399)
T 2x3n_A 353 HALATSLED 361 (399)
T ss_dssp HHHHHHTTC
T ss_pred HHhhhhhcc
Confidence 888776553
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=4.1e-36 Score=299.65 Aligned_cols=343 Identities=17% Similarity=0.229 Sum_probs=221.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC--CCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF--STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~--~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++||+||||||+|+++|+.|++.|++|+||||.+.+ ....++..+.+++++.|+++ |+++.+...+.+... ..+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~l-g~~~~~~~~~~~~~~---~~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREA-GVDRRMARDGLVHEG---VEI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHT-TCCHHHHHHCEEESC---EEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHc-CCcHHHHhcCCccce---EEE
Confidence 579999999999999999999999999999998753 23345557999999999999 999988775544322 111
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
... +... ..+ +...........+.+..+.+.|.+.+.+.|+ +|+++++|+++
T Consensus 78 ~~~--~~~~-~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-------------------~i~~~~~v~~i 129 (394)
T 1k0i_A 78 AFA--GQRR-RID------LKRLSGGKTVTVYGQTEVTRDLMEAREACGA-------------------TTVYQAAEVRL 129 (394)
T ss_dssp EET--TEEE-EEC------HHHHHTSCCEEECCHHHHHHHHHHHHHHTTC-------------------EEESSCEEEEE
T ss_pred EEC--CceE-Eec------cccccCCCceEEechHHHHHHHHHHHHhcCC-------------------eEEeceeEEEE
Confidence 111 1110 000 0000001224567888999999999988776 99999999999
Q ss_pred eecC-CceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeE---EEEEecCCcccccccCCCc
Q 012845 201 SATD-QCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLV---SVHFLSKDLGDYLLNERPG 276 (455)
Q Consensus 201 ~~~~-~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 276 (455)
+.++ +.+.|++. ++|+ ..++++|+||+|||.+|.+|++++..... .+...+ ....... .. ...+.
T Consensus 130 ~~~~~~~~~v~~~--~~g~--~~~~~a~~vV~AdG~~S~vr~~l~~~~~~--~~~~~~~~~~~~~~~~-~~----~~~~~ 198 (394)
T 1k0i_A 130 HDLQGERPYVTFE--RDGE--RLRLDCDYIAGCDGFHGISRQSIPAERLK--VFERVYPFGWLGLLAD-TP----PVSHE 198 (394)
T ss_dssp ECTTSSSCEEEEE--ETTE--EEEEECSEEEECCCTTCSTGGGSCGGGCE--EEEEEEEEEEEEEEES-SC----CSCSS
T ss_pred EEecCCceEEEEe--cCCc--EEEEEeCEEEECCCCCcHHHHhcCccccc--cccccccceeEEEecC-CC----CCccc
Confidence 8763 55777762 1553 23689999999999999999999754211 111111 1111111 10 11122
Q ss_pred eEEEEEccCceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCC----CCCCeeEEEeeceEeceeeec
Q 012845 277 MLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGW----ELSDIDVIDIKPWVMHAEVAE 352 (455)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 352 (455)
..+ ...++++.++.... .+...+.+.... ......++.+...+.+.+.+.. ............+++.....+
T Consensus 199 ~~~-~~~~~g~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (394)
T 1k0i_A 199 LIY-ANHPRGFALCSQRS--ATRSQYYVQVPL-SEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVE 274 (394)
T ss_dssp CEE-ECCTTCCEEEEEEE--TTEEEEEEEECT-TCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEE
T ss_pred eEE-EEcCCceEEEEecC--CCcEEEEEEeCC-CCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhcc
Confidence 222 22344444433322 233333332222 2233455665555555544322 111112222233444444455
Q ss_pred ccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHHh
Q 012845 353 KFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAM 432 (455)
Q Consensus 353 ~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~ 432 (455)
++.. +||+|||||||.|+|++|||+|+||+||..|+++|.+..++ +...+|+.|++.|++++..+++.|+.....++
T Consensus 275 ~~~~--grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~-~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~ 351 (394)
T 1k0i_A 275 PMQH--GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRE-GRGELLERYSAICLRRIWKAERFSWWMTSVLH 351 (394)
T ss_dssp CSEE--TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHH-CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccc--CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhcc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6654 99999999999999999999999999999999999887643 34789999999999999999999988766655
Q ss_pred ccc
Q 012845 433 EVP 435 (455)
Q Consensus 433 ~~~ 435 (455)
.++
T Consensus 352 ~~~ 354 (394)
T 1k0i_A 352 RFP 354 (394)
T ss_dssp CCT
T ss_pred cCC
Confidence 443
No 13
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.2e-36 Score=298.84 Aligned_cols=337 Identities=12% Similarity=0.082 Sum_probs=201.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS-THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~-~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
|.+|||+|||||||||++|+.|+++|++|+||||++.+. +..+|..|+++. ++.+ ++......... .+....
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~---l~~l-~~~~~~~~~~~---~~~~~~ 74 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGI---LNEA-DIKADRSFIAN---EVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHH---HHHT-TCCCCTTTEEE---EESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHH---HHHc-CCCchhhhhhc---ccceEE
Confidence 457999999999999999999999999999999988764 345677887754 4444 44321111000 011111
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
+. ...+......... .......+.++|..+.+.|.+.+.+.|+ +++++++|++
T Consensus 75 ~~-~~~~~~~~~~~~~-------~~~~~~~~~i~R~~~~~~L~~~a~~~G~-------------------~~~~~~~v~~ 127 (397)
T 3oz2_A 75 IY-GPSEKRPIILQSE-------KAGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALG 127 (397)
T ss_dssp EE-CTTCSSCEEEECS-------SSSCCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEE
T ss_pred EE-eCCCceEeecccc-------ccCCceeEEEEHHHHHHHHHHHHHhcCc-------------------EEeeeeeeee
Confidence 11 1111111110000 0112234678999999999999999987 9999999999
Q ss_pred eeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEE
Q 012845 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (455)
Q Consensus 200 i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (455)
+..+++.+...... .++ ...++++|+||+|||.+|.+|++++................+..... ...+....
T Consensus 128 ~~~~~~~~~~v~~~-~~~--~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 199 (397)
T 3oz2_A 128 VIKENGKVAGAKIR-HNN--EIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINV-----DVDPDYTD 199 (397)
T ss_dssp EEEETTEEEEEEEE-ETT--EEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC-----CCCTTEEE
T ss_pred eeeccceeeeeeec-ccc--cceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeecc-----ccCcccce
Confidence 98887776543331 122 23478999999999999999999987654444333333332221111 11222222
Q ss_pred EEEc---cCceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCC--CeeEEEeeceEec-eeeecc
Q 012845 280 FIFN---TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS--DIDVIDIKPWVMH-AEVAEK 353 (455)
Q Consensus 280 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~ 353 (455)
+.+. +.++.++ .+...+...+.+....+.. .......+.+.++....+. ...........++ ......
T Consensus 200 ~~~~~~~~~g~~~~--~~~~~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 273 (397)
T 3oz2_A 200 FYLGSIAPAGYIWV--FPKGEGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP 273 (397)
T ss_dssp EECSTTSTTEEEEE--EEEETTEEEEEEEEETTTS----CSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC
T ss_pred eeeeccCCCceEEE--eecccceeEEEEeeccchh----hhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccc
Confidence 2221 2233333 3333444443332211111 1122333444433322111 1111111111121 122233
Q ss_pred cccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHc-CCCCchhhhhHHHhhhHHHHHhHHhHHHH
Q 012845 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSVQN 427 (455)
Q Consensus 354 ~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~-~~~~~~al~~Y~~~r~~~~~~~~~~s~~~ 427 (455)
+. .+|++|+|||||.++|++|||+|+||+||..||++|.++++ ++...++|+.|++.++++..+........
T Consensus 274 ~~--~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~~~~~~~~~ 346 (397)
T 3oz2_A 274 IT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVA 346 (397)
T ss_dssp CE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ee--eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 38999999999999999999999999999999999999875 44567899999999988876555444333
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=7.3e-36 Score=299.45 Aligned_cols=349 Identities=19% Similarity=0.202 Sum_probs=218.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~-V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
+.++||+||||||+||++|+.|+++|++ |+||||.+.+...+++..+.+++++.|+.+ |+++.+...+.+... ..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~l-g~~~~l~~~~~~~~~---~~ 77 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAEL-GLGPALAATAIPTHE---LR 77 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHT-TCHHHHHHHSEEECE---EE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHC-CChHHHHhhCCCcce---EE
Confidence 4568999999999999999999999999 999999988877888999999999999999 999998776544322 11
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHh-cccccccCCCcccccccccccceEEeccEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 198 (455)
+ .+..|..+...+...... .......++|..|.+.|.+.+.+ .|. ++|+++++|+
T Consensus 78 ~-~~~~g~~~~~~~~~~~~~-----~~~~~~~i~r~~l~~~L~~~~~~~~g~------------------~~v~~~~~v~ 133 (410)
T 3c96_A 78 Y-IDQSGATVWSEPRGVEAG-----NAYPQYSIHRGELQMILLAAVRERLGQ------------------QAVRTGLGVE 133 (410)
T ss_dssp E-ECTTSCEEEEEECGGGGT-----CSSCEEEEEHHHHHHHHHHHHHHHHCT------------------TSEEESEEEE
T ss_pred E-EcCCCCEEeeccCCcccc-----CCCCeeeeeHHHHHHHHHHHHHhhCCC------------------cEEEECCEEE
Confidence 1 122333322111000000 01123568999999999999987 353 3799999999
Q ss_pred EeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceE
Q 012845 199 SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (455)
Q Consensus 199 ~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
+++. ++++.+++....+|+ ..++++|+||+|||.+|.+|++++.......+....+........ ...++..
T Consensus 134 ~i~~-~~~v~v~~~~~~~g~--~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~ 204 (410)
T 3c96_A 134 RIEE-RDGRVLIGARDGHGK--PQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFD------RFLDGKT 204 (410)
T ss_dssp EEEE-ETTEEEEEEEETTSC--EEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEES------CCTTSSE
T ss_pred EEec-CCccEEEEecCCCCC--ceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccc------cccCCCe
Confidence 9998 777777766211242 237899999999999999999996543211111111111111110 0112222
Q ss_pred EEEEcc--CceEEEEeecC-----CCCeEEEEeecCCC----CCCCCCCCH-HHHHHHHHHhhCCCCCCe---eE----E
Q 012845 279 FFIFNT--EAIGVLVAHDL-----KEGEFILQVPFYPP----QQNLEDFSP-EICEKLIFKLVGWELSDI---DV----I 339 (455)
Q Consensus 279 ~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~l~~~~~~~~~~~---~~----~ 339 (455)
+..+.. .+..++++... ....+.|.+..... ......+.. ....+++..+..+..... .+ .
T Consensus 205 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~ 284 (410)
T 3c96_A 205 MIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ 284 (410)
T ss_dssp EEEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS
T ss_pred EEEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc
Confidence 333332 33334433321 11233343322110 111122211 112222222222221100 00 0
Q ss_pred EeeceEece-eeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHH
Q 012845 340 DIKPWVMHA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAE 418 (455)
Q Consensus 340 ~~~~~~~~~-~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~ 418 (455)
....|++.. ...+.|.. +||+|||||||.|+|++|||+|+||+||..|+++|.+. .+...+|+.|++.|++++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~--grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~~~~ 359 (410)
T 3c96_A 285 LILQYPMVDRDPLPHWGR--GRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRPTAN 359 (410)
T ss_dssp EEEEEEEEECCCCSCCCB--TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHHHH
T ss_pred ccceeecccCCCcccccc--CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHH
Confidence 112334332 22345553 99999999999999999999999999999999999863 3457899999999999999
Q ss_pred HhHHhHHHHHHHH
Q 012845 419 FNTALSVQNFRAA 431 (455)
Q Consensus 419 ~~~~~s~~~~~~~ 431 (455)
.++..|++.+..+
T Consensus 360 ~~~~~s~~~~~~~ 372 (410)
T 3c96_A 360 KIILANREREKEE 372 (410)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHhh
Confidence 9999998665544
No 15
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=3e-35 Score=293.83 Aligned_cols=345 Identities=18% Similarity=0.251 Sum_probs=213.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC--CcccccCh-hHHHHHHhhhchHHHHHhcCCCcccccc
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH--PQAHFINN-RYALVFRKLDGLAEEIERSQPPVDLWRK 117 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~--~~~~~l~~-~~~~~l~~~~gl~~~l~~~~~~~~~~~~ 117 (455)
+.++||+||||||+|+++|+.|++.|++|+||||.+.+..+ +.++.+.+ .+.+.|+++ |+++.+.....+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~--- 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKA-GLLQTYYDLALPMGV--- 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHT-TCHHHHHHHCBCCCE---
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhc-ChHHHHHHhhcccce---
Confidence 45689999999999999999999999999999999776543 33444444 568999999 999998776554422
Q ss_pred eEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEE
Q 012845 118 FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (455)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v 197 (455)
...+..|..+..... ... .......++|..|.+.|.+.+.+ + .|+++++|
T Consensus 100 --~~~~~~g~~~~~~~~-~~~------~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v 149 (398)
T 2xdo_A 100 --NIADEKGNILSTKNV-KPE------NRFDNPEINRNDLRAILLNSLEN--D-------------------TVIWDRKL 149 (398)
T ss_dssp --EEECSSSEEEEECCC-GGG------TTSSCCEECHHHHHHHHHHTSCT--T-------------------SEEESCCE
T ss_pred --EEECCCCCchhhccc-ccc------CCCCCceECHHHHHHHHHhhcCC--C-------------------EEEECCEE
Confidence 111223333221100 000 01112357899999999887643 2 78999999
Q ss_pred EEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecC-Cc--ccccccCC
Q 012845 198 VSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK-DL--GDYLLNER 274 (455)
Q Consensus 198 ~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 274 (455)
++++.+++++.+++. +|+ ++++|+||+|||.+|.+|++++... ..+............ .. .... ...
T Consensus 150 ~~i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vR~~l~~~~--~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 219 (398)
T 2xdo_A 150 VMLEPGKKKWTLTFE---NKP----SETADLVILANGGMSKVRKFVTDTE--VEETGTFNIQADIHQPEINCPGFF-QLC 219 (398)
T ss_dssp EEEEECSSSEEEEET---TSC----CEEESEEEECSCTTCSCCTTTCCCC--CEEEEEEEEEEEESSHHHHSHHHH-HHH
T ss_pred EEEEECCCEEEEEEC---CCc----EEecCEEEECCCcchhHHhhccCCC--ceEcceEEEEEEeCchhccCchhH-hhc
Confidence 999988887777765 664 6799999999999999999986321 111111111111111 00 0000 001
Q ss_pred CceEEEEEccCceEEEEeecCCCCeEEEEeecCCCCCCC-----CCCCHHHHHHHHHHhhC-CCCCCeeEE----Eeece
Q 012845 275 PGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNL-----EDFSPEICEKLIFKLVG-WELSDIDVI----DIKPW 344 (455)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~-~~~~~~~~~----~~~~~ 344 (455)
+....+.+.++....+ .+...+.+.+.+....+.... ...+.+...+.+.+.+. |.....+++ ....+
T Consensus 220 ~~g~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (398)
T 2xdo_A 220 NGNRLMASHQGNLLFA--NPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGL 297 (398)
T ss_dssp TTSEEEEEETTEEEEE--EEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEE
T ss_pred CCceEEEecCCCeEEE--EeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceee
Confidence 1222333444433332 343445554444332222111 11244444444444332 211000000 01112
Q ss_pred Eece-eeecccccCCC--cEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCC-CchhhhhHHHhhhHHHHHh
Q 012845 345 VMHA-EVAEKFLCCYN--QIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFN 420 (455)
Q Consensus 345 ~~~~-~~~~~~~~~~~--~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~-~~~al~~Y~~~r~~~~~~~ 420 (455)
++.. .....|.. .+ ||+|||||||.|+|++|||+|+||+||..|+++|.+. ..+ ...+|+.|+++|++++..+
T Consensus 298 ~~~~~~~~~~~~~-~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~~~~~~~ 374 (398)
T 2xdo_A 298 ATRIFPLEKPWKS-KRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMFIYGKEA 374 (398)
T ss_dssp EEEECCCCSCCCS-CCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeccCCCCccc-CCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHHH
Confidence 2221 12224432 24 8999999999999999999999999999999999863 223 4689999999999999999
Q ss_pred HHhHHHHHHHHhcc
Q 012845 421 TALSVQNFRAAMEV 434 (455)
Q Consensus 421 ~~~s~~~~~~~~~~ 434 (455)
+..|+..+..++..
T Consensus 375 ~~~s~~~~~~~~~~ 388 (398)
T 2xdo_A 375 QEESTQNEIEMFKP 388 (398)
T ss_dssp HHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhCC
Confidence 99999998877654
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.8e-33 Score=279.19 Aligned_cols=324 Identities=15% Similarity=0.167 Sum_probs=211.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
..+||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+++++++.|+++ |+++.+...+.+... ..+.
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~---~~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL-GALDDVLQGSHTPPT---YETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHT-TCHHHHHTTCBCCSC---EEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHc-CCHHHHHhhCCCccc---eEEE
Confidence 468999999999999999999999999999999988877788999999999999999 999998876655432 2222
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
.. |..+...+.. ......++|..|.+.|.+.+.+.|+ +|+++++|++++
T Consensus 86 ~~--g~~~~~~~~~----------~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i~ 134 (379)
T 3alj_A 86 MH--NKSVSKETFN----------GLPWRIMTRSHLHDALVNRARALGV-------------------DISVNSEAVAAD 134 (379)
T ss_dssp ET--TEEEEEECGG----------GCCEEEEEHHHHHHHHHHHHHHTTC-------------------EEESSCCEEEEE
T ss_pred eC--CceeeeccCC----------CCceEEECHHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEE
Confidence 21 3332221110 1124678999999999999999886 999999999998
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEEE-
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF- 280 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (455)
. ++ .|++. +|+ ++++|+||+|||.+|.+|++++..... .+................. ....+.....
T Consensus 135 ~--~~-~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 202 (379)
T 3alj_A 135 P--VG-RLTLQ---TGE----VLEADLIVGADGVGSKVRDSIGFKQDR-WVSKDGLIRLIVPRMKKEL-GHGEWDNTIDM 202 (379)
T ss_dssp T--TT-EEEET---TSC----EEECSEEEECCCTTCHHHHHHCCCEEE-EEEEEEEEEEEEECCHHHH-CSSCTTSEEEE
T ss_pred e--CC-EEEEC---CCC----EEEcCEEEECCCccHHHHHHhcCCCCc-CcCCcEEEEEEechhhccC-CcCCccccccc
Confidence 7 33 56654 564 789999999999999999999753211 1111111111111110000 0011111111
Q ss_pred --EEccCceEEEEeecCCCCeEEEEeecCCCC---CCCCCCCHHH---HH---HHHHHhhCCCCCCeeEEEeeceEece-
Q 012845 281 --IFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEI---CE---KLIFKLVGWELSDIDVIDIKPWVMHA- 348 (455)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~---~~l~~~~~~~~~~~~~~~~~~~~~~~- 348 (455)
.+.+++..+ .+|...+...|.+...... +.+...-.+. +. +.+....... ...|++..
T Consensus 203 ~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~ 272 (379)
T 3alj_A 203 WNFWPRVQRIL--YSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLK--------TARYDKYET 272 (379)
T ss_dssp ECCSSSCCEEE--EEECSSSEEEEEEEECTTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTCT--------TCCEEEEEE
T ss_pred ceEECCCCEEE--EEECCCCcEEEEEEecCCCCCHHHHHHHHhcCCchhccHHHHHhhCCccc--------eEEeccccc
Confidence 234444444 3455555555444332211 1111111110 00 1222111111 11233332
Q ss_pred eeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHH
Q 012845 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQN 427 (455)
Q Consensus 349 ~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~ 427 (455)
...+.|.. +||+|||||||.++|++|||+|+||+||..|+++|.+ ..+...+|+.|++.|++++..++..+.+.
T Consensus 273 ~~~~~~~~--~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~---~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~ 346 (379)
T 3alj_A 273 TKLDSWTR--GKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE---GSSVEDALVAWETRIRPITDRCQALSGDY 346 (379)
T ss_dssp EEESCSEE--TTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS---SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccc--CcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc---ccCHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 23455553 8999999999999999999999999999999999964 22446899999999999999999999543
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=3.3e-32 Score=280.41 Aligned_cols=353 Identities=14% Similarity=0.123 Sum_probs=218.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHH-HHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~-~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
+.++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..+..+.+.... +++.+ |+++.+.....+......+.
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-~~g~~~~~~~~~~~l~~l-gl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRH-QIGESLLPATVHGICAML-GLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCHHHHTTHHHHT-TCHHHHHTTTCCEECEEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCC-CCCcccCcchHHHHHHHh-CcHHHHHHcCCccccCceEE
Confidence 4579999999999999999999999999999999975543 345666676554 88888 99998877665543221111
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
.......+. ....... .......++++|..|.+.|.+.+.+.|+ +|+++++|++
T Consensus 83 --~~~~~~~~~-~~~~~~~----~~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~~~~V~~ 136 (512)
T 3e1t_A 83 --WGKEPEPWT-FGFTRHP----DDPYGFAYQVERARFDDMLLRNSERKGV-------------------DVRERHEVID 136 (512)
T ss_dssp --CSSCSSCEE-EESSSSS----SSTTCCEEBCCHHHHHHHHHHHHHHTTC-------------------EEESSCEEEE
T ss_pred --ecCCccccc-cccccCC----CCCcceeeEecHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEE
Confidence 111111000 0000000 0112235678999999999999999886 9999999999
Q ss_pred eeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceE
Q 012845 200 VSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (455)
Q Consensus 200 i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
+..+++.+. |.+.. .+|+ ..++++|+||+|||.+|.+|++++.......+ .......+...... .. .......
T Consensus 137 v~~~~~~v~gv~~~~-~dG~--~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~-~~~a~~~~~~~~~~-~~-~~~~~~~ 210 (512)
T 3e1t_A 137 VLFEGERAVGVRYRN-TEGV--ELMAHARFIVDASGNRTRVSQAVGERVYSRFF-QNVALYGYFENGKR-LP-APRQGNI 210 (512)
T ss_dssp EEEETTEEEEEEEEC-SSSC--EEEEEEEEEEECCCTTCSSGGGTCCEEECSTT-CEEEEEEEEESCCC-CS-TTCTTSE
T ss_pred EEEECCEEEEEEEEe-CCCC--EEEEEcCEEEECCCcchHHHHHcCCCccCchh-cceEEEEEecCCcc-CC-CCCcCce
Confidence 998877654 55541 1332 34789999999999999999999754332222 22222222221110 01 1112223
Q ss_pred EEEEccCceEEEEeecCCCCeEEEEeecCCCC-CCCCCCCHHHHHHHHHH------hhCCCCCCeeEEEeeceEece---
Q 012845 279 FFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFK------LVGWELSDIDVIDIKPWVMHA--- 348 (455)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~--- 348 (455)
+..+.+.++.+ .+|...+...+.+...... ........+.+..++.. .+..... .........++..
T Consensus 211 ~~~~~~~G~~~--~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~-~~~~~~~~i~~~~~~~ 287 (512)
T 3e1t_A 211 LSAAFQDGWFW--YIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATR-VTTGDYGEIRIRKDYS 287 (512)
T ss_dssp EEEEETTEEEE--EEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEE-CCSSTTSSCEEEESCC
T ss_pred EEEEeCCceEE--EEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCcc-ccccccccceeecccc
Confidence 33444444444 4455555444433221111 11112223333333321 1111100 0000000111111
Q ss_pred eeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCC-CCchhhhhHHHhhhHHHHHhHHhHHHH
Q 012845 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDI-APASILNTYETERKPIAEFNTALSVQN 427 (455)
Q Consensus 349 ~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~-~~~~al~~Y~~~r~~~~~~~~~~s~~~ 427 (455)
.....+. .+||+|||||||+++|++|||+|+|++||..|+++|...+.+. +...+|+.|++.|+++...+.++...+
T Consensus 288 ~~~~~~~--~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~ 365 (512)
T 3e1t_A 288 YCNTSFW--KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLVAF 365 (512)
T ss_dssp EEESCSB--CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233443 4899999999999999999999999999999999999876543 345789999999999999999999988
Q ss_pred HHHHh
Q 012845 428 FRAAM 432 (455)
Q Consensus 428 ~~~~~ 432 (455)
|....
T Consensus 366 y~~~~ 370 (512)
T 3e1t_A 366 YDMNQ 370 (512)
T ss_dssp HHHCC
T ss_pred Hhhhc
Confidence 88654
No 18
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=3.8e-33 Score=278.06 Aligned_cols=339 Identities=12% Similarity=0.097 Sum_probs=210.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST-HPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~-~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
.++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..++..+++ ..++.+ |+++..... ...+....+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~l-g~~~~~~~~---~~~~~~~~~ 75 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEA-DIKADRSFI---ANEVKGARI 75 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHT-TCCCCTTTE---EEEESEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHc-CCCCChHHh---hhhcceEEE
Confidence 468999999999999999999999999999999986543 455555554 455666 664321110 011111111
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
. ...+......+... ........++|..|.+.|.+.+.+.|+ +++++++|+++
T Consensus 76 ~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i 128 (397)
T 3cgv_A 76 Y-GPSEKRPIILQSEK-------AGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALGV 128 (397)
T ss_dssp E-CTTCSSCEEEC------------CCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEEE
T ss_pred E-cCCCCEEEEEeccc-------cCCceeEEEeHHHHHHHHHHHHHhCCC-------------------EEEECCEEEEE
Confidence 1 11222101111000 002235678999999999999999887 99999999999
Q ss_pred eecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCc-cCCcc-cceeEEEEEecCCcccccccCCCce
Q 012845 201 SATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL-VGEKD-LQKLVSVHFLSKDLGDYLLNERPGM 277 (455)
Q Consensus 201 ~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
+.+++.+. |++.. .+. ..++++|+||+|||.+|.+|++++... ..... ....+......... .+..
T Consensus 129 ~~~~~~v~gv~~~~--~~~--~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 197 (397)
T 3cgv_A 129 IKENGKVAGAKIRH--NNE--IVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDV-------DPDY 197 (397)
T ss_dssp EEETTEEEEEEEEE--TTE--EEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCC-------CTTE
T ss_pred EEeCCEEEEEEEEE--CCe--EEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCC-------CCCc
Confidence 98887776 66652 222 237899999999999999999997654 22111 11111111111111 1333
Q ss_pred EEEEE---ccCceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCC----CCCeeEEEeeceEeceee
Q 012845 278 LFFIF---NTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWE----LSDIDVIDIKPWVMHAEV 350 (455)
Q Consensus 278 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 350 (455)
..+.+ .++++.++ +|...+...+.+....... .......+.+.++.... ...........+++. ..
T Consensus 198 ~~~~~~~~~~~g~~~~--~P~~~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~-~~ 270 (397)
T 3cgv_A 198 TDFYLGSIAPAGYIWV--FPKGEGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVS-KV 270 (397)
T ss_dssp EEEECSTTSTTEEEEE--EEEETTEEEEEEEEETTTC----SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECC-CC
T ss_pred EEEEeCCcCCCceEEE--EECCCCeEEEEEEeccccc----cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecC-CC
Confidence 33333 23344444 3444455444433222211 12233334444433222 112212222333432 23
Q ss_pred ecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhH-cCCCCchhhhhHHHhhhHHHHHhHHhHHHHHH
Q 012845 351 AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (455)
Q Consensus 351 ~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~-~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~ 429 (455)
...+. .+|++++|||||.++|++|+|+++|++||..|++.|.+.+ .++....+|+.|++.|+++....+..++...+
T Consensus 271 ~~~~~--~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3cgv_A 271 KMPIT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp CSCCE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccee--eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444 3899999999999999999999999999999999999877 34556789999999999999999888887766
Q ss_pred HHhcc
Q 012845 430 AAMEV 434 (455)
Q Consensus 430 ~~~~~ 434 (455)
.+..+
T Consensus 349 ~~~~~ 353 (397)
T 3cgv_A 349 KLAML 353 (397)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 55544
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=3.3e-32 Score=273.62 Aligned_cols=350 Identities=13% Similarity=0.115 Sum_probs=220.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+.++||+||||||+|+++|+.|+++|++|+||||.+.+. ...|..+.+.+...++.+ |+++.+...+.+..... .+
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~--~~ 78 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEA-GFLDAVKAQGFQQKFGA--KF 78 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHT-TCHHHHHHTTCEEECEE--EE
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHc-CChHHHHHcCCcccCCc--EE
Confidence 356899999999999999999999999999999997654 367888999999999999 99998887654332111 11
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.. +......+...... .......+++|..|.+.|.+.+.+.|+ +++++++|+++
T Consensus 79 ~~---~~~~~~~~~~~~~~----~~~~~~~~~~r~~~~~~L~~~a~~~gv-------------------~i~~~~~v~~i 132 (421)
T 3nix_A 79 VR---GKEIADFNFSDQFS----NGWNWTWQVPRGNFDKTLADEAARQGV-------------------DVEYEVGVTDI 132 (421)
T ss_dssp EE---TTEEEEEETTSCSS----CSCCCEEECCHHHHHHHHHHHHHHHTC-------------------EEECSEEEEEE
T ss_pred Ee---CCeeEEEeehhhcC----CCCCceeEECHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEE
Confidence 11 11111111110000 012235678999999999999999887 99999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceEEE
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (455)
+.+++++.+.+.. .+|+ ..++++|+||+|||.+|.+|+.++............+............. ......+.
T Consensus 133 ~~~~~~~~v~v~~-~~g~--~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 207 (421)
T 3nix_A 133 KFFGTDSVTTIED-INGN--KREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAA--EMEGNRIT 207 (421)
T ss_dssp EEETTEEEEEEEE-TTSC--EEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC------CCSEEE
T ss_pred EEeCCEEEEEEEc-CCCC--EEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCcc--CCCCeEEE
Confidence 9887776665552 2342 34689999999999999999999876655444444444433322211110 11222233
Q ss_pred EEccCceEEEEeecCCCCeEEEEeecCCCCC-CCCCCCHHHHHHHHHHhhCCCC---CCeeE-EEeeceEeceeeecccc
Q 012845 281 IFNTEAIGVLVAHDLKEGEFILQVPFYPPQQ-NLEDFSPEICEKLIFKLVGWEL---SDIDV-IDIKPWVMHAEVAEKFL 355 (455)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~ 355 (455)
.......++++..|..++...+.+....... .......+.+.+++... +... ..... .....++........+.
T Consensus 208 ~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
T 3nix_A 208 AVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANE-GHIAERFKSEEFLFEPRTIEGYAISASKLY 286 (421)
T ss_dssp EEEEETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTC-TTTHHHHTTCCBSSCCEEEECCCBEESCSE
T ss_pred EEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhC-cHHHHHHhcCccccCceeecccceeeeeec
Confidence 3222233455555666666555543322111 11111223333333221 1100 00000 01112222223334444
Q ss_pred cCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHH
Q 012845 356 CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (455)
Q Consensus 356 ~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~ 429 (455)
.+++++||||||+++|++|+|+++|++||..|+++|.+.+++. ..+.++.|++.++........+....|.
T Consensus 287 --~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 357 (421)
T 3nix_A 287 --GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGE-EVNWEKDFVEHMMQGIDTFRSFVTGWYD 357 (421)
T ss_dssp --ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred --cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3899999999999999999999999999999999999987654 3457889999988876666555444443
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=3.2e-32 Score=276.42 Aligned_cols=339 Identities=15% Similarity=0.056 Sum_probs=205.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC--CCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccce
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~--~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~ 118 (455)
++++||+||||||+|+++|+.|+++|++|+||||.+.+. ...++..+ +...++.+ |+.+.+... ....+...
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~l-g~~~~~~~~--~~~~~~~~ 77 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKL-GMPYPKGEE--LENKINGI 77 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHT-TCCCCCGGG--EEEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHh-cCCCCchHH--HHhhhcce
Confidence 457999999999999999999999999999999987642 33455555 34566666 654311100 00001111
Q ss_pred EEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEE
Q 012845 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (455)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 198 (455)
.+. ...+.. ...+ +.....++|..|.+.|.+.+.+.|+ +++++++|+
T Consensus 78 ~~~-~~~~~~--------~~~~-----~~~~~~i~r~~l~~~L~~~a~~~gv-------------------~i~~~~~v~ 124 (453)
T 3atr_A 78 KLY-SPDMQT--------VWTV-----NGEGFELNAPLYNQRVLKEAQDRGV-------------------EIWDLTTAM 124 (453)
T ss_dssp EEE-CTTSSC--------EEEE-----EEEEEEECHHHHHHHHHHHHHHTTC-------------------EEESSEEEE
T ss_pred EEE-CCCCce--------EEeE-----CCCcEEEcHHHHHHHHHHHHHHcCC-------------------EEEeCcEEE
Confidence 111 111100 0000 1124568999999999999999886 999999999
Q ss_pred EeeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCcc--CCcc---cceeEEEEEecCCccccccc
Q 012845 199 SVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLV--GEKD---LQKLVSVHFLSKDLGDYLLN 272 (455)
Q Consensus 199 ~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~ 272 (455)
++..+++.+. |++....+| ...++++|+||+|||.+|.+|+.++.... .... ....+......... .
T Consensus 125 ~i~~~~~~v~gv~~~~~~~G--~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 197 (453)
T 3atr_A 125 KPIFEDGYVKGAVLFNRRTN--EELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKED-----I 197 (453)
T ss_dssp EEEEETTEEEEEEEEETTTT--EEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSC-----C
T ss_pred EEEEECCEEEEEEEEEcCCC--ceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCC-----c
Confidence 9998777654 555421123 23478999999999999999999976431 1111 11111111111111 0
Q ss_pred CCCceEEEEEc----cCceEEEEeecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEec-
Q 012845 273 ERPGMLFFIFN----TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMH- 347 (455)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 347 (455)
..+......+. ++++.++++. ..+.+.+.+......... -..+.+.+.+.+..+. ....++.....+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~~P~--~~~~~~vg~~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~p~ 272 (453)
T 3atr_A 198 EDHDYLRIFIDQETSPGGYWWYFPK--GKNKVNVGLGIQGGMGYP--SIHEYYKKYLDKYAPD-VDKSKLLVKGGALVPT 272 (453)
T ss_dssp TTTTEEEEECCTTTSTTSCEEEEEE--ETTEEEEEEEEESSSCCC--CHHHHHHHHHHHHCTT-EEEEEEEEEEEEEEEC
T ss_pred cCCCeEEEEECCCCCCCcEEEEEEC--CCCeEEEEEEecCCCCCC--CHHHHHHHHHHhhhhh-cCCCeEEeccceeccC
Confidence 12233222222 4455555444 334444443322211111 1234555555543221 111223222222222
Q ss_pred eeeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHc-CCCCchhhhhHHHhhhHHHHHhHHhHHH
Q 012845 348 AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSVQ 426 (455)
Q Consensus 348 ~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~-~~~~~~al~~Y~~~r~~~~~~~~~~s~~ 426 (455)
....+.+.. +|++|||||||.++|++|||+++|++||..|+++|.+.++ ++...++|+.|++.|+++....+..+..
T Consensus 273 ~~~~~~~~~--~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~ 350 (453)
T 3atr_A 273 RRPLYTMAW--NGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDI 350 (453)
T ss_dssp SSCCSCSEE--TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCCceec--CCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223344543 8999999999999999999999999999999999998765 3334689999999999999888887765
Q ss_pred HHHHHh
Q 012845 427 NFRAAM 432 (455)
Q Consensus 427 ~~~~~~ 432 (455)
..+.+.
T Consensus 351 ~~~~~~ 356 (453)
T 3atr_A 351 FRRFLQ 356 (453)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 554443
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=2.1e-32 Score=284.62 Aligned_cols=350 Identities=15% Similarity=0.160 Sum_probs=217.4
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
||+++||+||||||+|+++|+.|+++|++|+|||+.+.+.. ..+..+.+.+...++.+ |+++.+............+.
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~l-Gl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRL-GLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHT-TCHHHHHHHCCEEECEEEEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHc-CCcHHHHhcCCcccCCcEEE
Confidence 35579999999999999999999999999999999876543 45788999999999999 99998877544321111111
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
........ ........ ... .......+++|..|.+.|.+.+.+.|+ +++++++|++
T Consensus 98 --~~~~~~~~-~~~~~~~~-~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~g~~V~~ 153 (591)
T 3i3l_A 98 --WGQDQAPW-TFSFAAPK-VAP-WVFDHAVQVKREEFDKLLLDEARSRGI-------------------TVHEETPVTD 153 (591)
T ss_dssp --CSSSCCCE-EEECCCC---CT-TCCSCEEECCHHHHHHHHHHHHHHTTC-------------------EEETTCCEEE
T ss_pred --ecCCCccc-eeeccccc-ccc-cccCeeEEEcHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 11111100 00000000 000 012235678999999999999999887 9999999999
Q ss_pred eeec-CCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCceE
Q 012845 200 VSAT-DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (455)
Q Consensus 200 i~~~-~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
+..+ ++.+.|++.. +| ...++.+|+||+|||.+|.+|++++.......+....+...+..... .........
T Consensus 154 v~~~~g~~~~V~~~~--~G--~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~---~~~~~~~~~ 226 (591)
T 3i3l_A 154 VDLSDPDRVVLTVRR--GG--ESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDP---FEGDLKGTT 226 (591)
T ss_dssp EECCSTTCEEEEEEE--TT--EEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCS---CCSTTTTCE
T ss_pred EEEcCCCEEEEEEec--CC--ceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCcc---ccCCCCCce
Confidence 9875 4455566651 33 22478999999999999999999976533211111111221221111 111222333
Q ss_pred EEEEccCceEEEEeecCCCCeEEEEeecCCCCC-CCCCCCHHHHHHHHHHhhCCCCC------CeeE-EEeeceEeceee
Q 012845 279 FFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQ-NLEDFSPEICEKLIFKLVGWELS------DIDV-IDIKPWVMHAEV 350 (455)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~------~~~~-~~~~~~~~~~~~ 350 (455)
+..+.+.+..+. +|...+.+.+.+....... .+...+.+ +++..+....+. .... .....++.....
T Consensus 227 ~~~~~~~G~~w~--iPl~~~~~sv~~~~~~~~~~~l~~~~~~---~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~ 301 (591)
T 3i3l_A 227 YSITFEDGWVWM--IPIKDDLYSVGLVVDRSKSAEVREQGAD---AFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYD 301 (591)
T ss_dssp EEEEETTEEEEE--EECSSSEEEEEEEEEGGGHHHHHHHCHH---HHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEE
T ss_pred EEEEcCCcEEEE--EECCCCeEEEEEEcCHHHHhhhccCCHH---HHHHHHHHhCHHHHHHHhcCccccCceEecccccc
Confidence 344445544444 4444555544432211110 00011112 122221111100 0000 001111112222
Q ss_pred ecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCC-CchhhhhHHHhhhHHHHHhHHhHHHHHH
Q 012845 351 AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNTALSVQNFR 429 (455)
Q Consensus 351 ~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~-~~~al~~Y~~~r~~~~~~~~~~s~~~~~ 429 (455)
...+. .+|+++||||||+++|+.|||+++|++||..|+++|.+.+.+.+ ...+++.|++.|+++...+.++...+|.
T Consensus 302 ~~~~~--~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~ 379 (591)
T 3i3l_A 302 TEVFS--ADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFYT 379 (591)
T ss_dssp ESCSE--ETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcc--cCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444 38999999999999999999999999999999999998875433 3568999999999999999999999994
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=2.2e-33 Score=278.69 Aligned_cols=331 Identities=15% Similarity=0.078 Sum_probs=201.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchH-HH-HHhcCCCcccccceE
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLA-EE-IERSQPPVDLWRKFI 119 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~-~~-l~~~~~~~~~~~~~~ 119 (455)
.||+||||||+|+++|+.|+++ |++|+||||.+.+...+++..++++++..+... ++. +. +.....+ +....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~ 76 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANP-LSYLDAPERLNPQF---LEDFK 76 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCG-GGGSSCGGGGCCEE---ECCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCc-chhhhhhHHHhhcc---ccceE
Confidence 3899999999999999999999 999999999988877788888887766522111 333 22 2221111 11111
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
+.. .|..+.. .. ......+.|..|.+.|.+.+.+.|+ +++++++|++
T Consensus 77 ~~~--~g~~~~~-------~~-----~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 123 (381)
T 3c4a_A 77 LVH--HNEPSLM-------ST-----GVLLCGVERRGLVHALRDKCRSQGI-------------------AIRFESPLLE 123 (381)
T ss_dssp EEE--SSSEEEC-------CC-----CSCEEEEEHHHHHHHHHHHHHHTTC-------------------EEETTCCCCS
T ss_pred EEe--CCeeEEe-------cC-----CCceeeecHHHHHHHHHHHHHHCCC-------------------EEEeCCEecc
Confidence 111 2222210 00 1123468999999999999999886 8999999998
Q ss_pred eeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccC-CcccceeEEEEEecCCcccccccCCCceE
Q 012845 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVG-EKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (455)
Q Consensus 200 i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (455)
++.. . ++++|+||+|||.+|. |+++...... ................ ..+...
T Consensus 124 i~~~--------~----------~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~ 177 (381)
T 3c4a_A 124 HGEL--------P----------LADYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQL-------FDQMNL 177 (381)
T ss_dssp GGGC--------C----------GGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSC-------CSSEEE
T ss_pred chhc--------c----------cccCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCC-------CCccee
Confidence 8642 0 1369999999999999 9887321110 0000111111111110 011112
Q ss_pred EEEEccCceEEEEeecCCCCeEEEEeecCCCC---CCCCCCCHHHHHHHHHHhhCCCCCCeeEEEee--ceEece-eeec
Q 012845 279 FFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEICEKLIFKLVGWELSDIDVIDIK--PWVMHA-EVAE 352 (455)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 352 (455)
.+.+.+.+..++..++...+...+.+...... .....++.+...+.+.+.+.......+++... .|+... ...+
T Consensus 178 ~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 257 (381)
T 3c4a_A 178 VFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFMTLSHD 257 (381)
T ss_dssp EEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTTTCSEEEEECCCS
T ss_pred eEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCCcceeeeccccCC
Confidence 22223333333334454444444333221110 12234455554444444332110011222111 344432 3345
Q ss_pred ccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHHHh
Q 012845 353 KFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAM 432 (455)
Q Consensus 353 ~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~~~ 432 (455)
.|.. +||+|||||||.|+|++|||+|+||+||..|+++|.+. .+...+|+.|++.|++++..++..++.+..++.
T Consensus 258 ~~~~--grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~ 332 (381)
T 3c4a_A 258 RCHD--GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGVPAALKRFEERALPLVQLFRGHADNSRVWFE 332 (381)
T ss_dssp CSEE--TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cccc--CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 5654 99999999999999999999999999999999999863 345789999999999999999999999998888
Q ss_pred ccccccCCCc
Q 012845 433 EVPSALGLDP 442 (455)
Q Consensus 433 ~~~~~~~~~~ 442 (455)
.+++..+.+|
T Consensus 333 ~~~~~~~~~~ 342 (381)
T 3c4a_A 333 TVEERMHLSS 342 (381)
T ss_dssp TCSCC-----
T ss_pred chhhhhcCCH
Confidence 8777766544
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=5.1e-29 Score=259.74 Aligned_cols=344 Identities=15% Similarity=0.087 Sum_probs=194.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCCCCC-CcccccChhHHHHHHhhhchHHHHHhcCCCcc
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTH-PQAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~------g~~V~l~Er~~~~~~~-~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~ 113 (455)
.+++||+||||||+||++|+.|+++ |++|+||||.+.+..+ .++..+.+++++.| + +-+ ...+.+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l-~~~---~~~g~~~~ 106 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F-PDW---KEKGAPLN 106 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C-TTH---HHHTCCCC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H-HHH---HhcCCcee
Confidence 4579999999999999999999999 9999999999876543 45677888777655 3 222 22233321
Q ss_pred c--cc-ceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccce
Q 012845 114 L--WR-KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGRE 190 (455)
Q Consensus 114 ~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (455)
. .. .+.+. ...+. + ..+....... .......++|..|.++|.+.+++.|+ +
T Consensus 107 ~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~----~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~ 160 (584)
T 2gmh_A 107 TPVTEDRFGIL-TEKYR-I-PVPILPGLPM----NNHGNYVVRLGHLVSWMGEQAEALGV-------------------E 160 (584)
T ss_dssp EECCEEEEEEE-CSSCE-E-ECCCCTTSTT----CCTTCEECCHHHHHHHHHHHHHHTTC-------------------E
T ss_pred eeechhheeee-ccCCC-c-cccccCcccc----ccCCCEEEeHHHHHHHHHHHHHHcCC-------------------E
Confidence 1 00 11111 11111 0 0110000000 11224568999999999999999887 9
Q ss_pred EEeccEEEEeeecCCc-eE-EEEEe---ccCCcc-----eeEEEEeCEEEeecCCCchhhhhc----CCCccCCccccee
Q 012845 191 ILMGHECVSVSATDQC-IN-VIASF---LKEGKC-----TERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKDLQKL 256 (455)
Q Consensus 191 i~~~~~v~~i~~~~~~-~~-v~~~~---~~~g~~-----~~~~~~~d~vV~AdG~~S~vr~~l----~~~~~~~~~~~~~ 256 (455)
|+++++|+++..++++ +. |.+.. ..+|.. ...++.+|+||+|||.+|.+|+++ +............
T Consensus 161 i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~ 240 (584)
T 2gmh_A 161 VYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 (584)
T ss_dssp EETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE
T ss_pred EEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh
Confidence 9999999999887643 43 44431 012310 013789999999999999999887 5432211111111
Q ss_pred EEEEEecCCcccccccCCCceEEEEEc------cCceEEEEeecCCCCeEEEEeecCCCCCCCCCCC-HHHHHHHHH---
Q 012845 257 VSVHFLSKDLGDYLLNERPGMLFFIFN------TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFS-PEICEKLIF--- 326 (455)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--- 326 (455)
.......-.. ....++.....+. ..+..+++..+...+.+.+.+........ ...+ .+.+.+++.
T Consensus 241 g~~~~~~v~~----~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~p~ 315 (584)
T 2gmh_A 241 GLKELWVIDE----KKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQN-PYLSPFREFQRWKHHPS 315 (584)
T ss_dssp EEEEEEECCG----GGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCC-TTCCHHHHHHHHTTSTT
T ss_pred hhhhheecCc----ccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCccc-ccCChHHHHHHHHhChH
Confidence 1111111110 0112333222221 01223333332113444444322111111 1112 233333211
Q ss_pred --HhhCCCCCCeeEEEeec---eEeceeeecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCC-
Q 012845 327 --KLVGWELSDIDVIDIKP---WVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDI- 400 (455)
Q Consensus 327 --~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~- 400 (455)
..+. ..+...... ++......+.+. .+|++|||||||+++|+.|||+|+||+||..|+++|.++++..
T Consensus 316 i~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~ 389 (584)
T 2gmh_A 316 IKPTLE----GGKRIAYGARALNEGGFQSIPKLT--FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSEN 389 (584)
T ss_dssp THHHHT----TCEEEEEEEEEEECCGGGGCCCCE--ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhC----CCeEEEecceEccCCCcccCCccc--cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1111 112221111 111122234444 3899999999999999999999999999999999999987533
Q ss_pred -CCchh---hhhHHHhhhHH-HHHhHHhHHHH
Q 012845 401 -APASI---LNTYETERKPI-AEFNTALSVQN 427 (455)
Q Consensus 401 -~~~~a---l~~Y~~~r~~~-~~~~~~~s~~~ 427 (455)
....+ |+.|++.|+++ +.+.+..+++.
T Consensus 390 ~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~ 421 (584)
T 2gmh_A 390 LQSKTIGLHVTEYEDNLKNSWVWKELYSVRNI 421 (584)
T ss_dssp CCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTT
T ss_pred cchhhhhhhHHHHHHHHHHhHHHHHHHHHhCh
Confidence 34554 99999999987 56666655544
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.97 E-value=5.1e-30 Score=264.90 Aligned_cols=346 Identities=13% Similarity=0.117 Sum_probs=205.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHh------------CCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHH--HHh
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK------------LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IER 107 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~------------~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~--l~~ 107 (455)
..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.|..+.+++..+|+.+ |+.+. +..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~-g~g~~~~p~~~~~l~~l-Gi~e~~~~~~ 83 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATI-GVGEGTWPSMRSTLSKI-GIDENDFIRQ 83 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCC-CSCEECCTHHHHHHHHH-TCCHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCc-ceeeechHhHHHHHHHc-CCCHHHHHHH
Confidence 46899999999999999999999 8999999999765543 34788899999999999 99886 555
Q ss_pred cCCCcc------cccc--------eEEeecCCCCccccccC----C---Ccccc----------------------ccc-
Q 012845 108 SQPPVD------LWRK--------FIYCTSVTGPILGSVDH----M---QPQDF----------------------EKV- 143 (455)
Q Consensus 108 ~~~~~~------~~~~--------~~~~~~~~~~~~~~~~~----~---~~~~~----------------------~~~- 143 (455)
...... .|.. ..++....+......+. . ....+ ...
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~ 163 (526)
T 2pyx_A 84 CDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYH 163 (526)
T ss_dssp TTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTC
T ss_pred cCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccC
Confidence 432211 1211 00111000000000000 0 00000 000
Q ss_pred cCCccccccchhhHHHHHHHHHHh-cccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeE
Q 012845 144 VSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTER 222 (455)
Q Consensus 144 ~~~~~~~~i~r~~l~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 222 (455)
.......+++|..|.+.|.+.+.+ .|+ +++++ +|++++.++++..+.+.. .+|.
T Consensus 164 ~~~~~~~~~~r~~l~~~L~~~a~~~~Gv-------------------~i~~~-~v~~i~~~~~g~~~~v~~-~~g~---- 218 (526)
T 2pyx_A 164 FQNNYGYHLNAAKFSQLLTEHCTQKLGV-------------------THIRD-HVSQIINNQHGDIEKLIT-KQNG---- 218 (526)
T ss_dssp CSSCCEEEECHHHHHHHHHHHHHHTSCC-------------------EEEEC-CEEEEEECTTSCEEEEEE-SSSC----
T ss_pred CCCCeeEEEcHHHHHHHHHHHHHhcCCC-------------------EEEEe-EEEEEEecCCCcEEEEEE-CCCC----
Confidence 112234678999999999999998 787 88999 699998765554333221 1443
Q ss_pred EEEeCEEEeecCCCchh-hhhcCCCccCCcc---cceeEEEEEecCCcccccccCCCceEEEEEccCceEEEEeecCCCC
Q 012845 223 NIQCNILIGTDGAGSTV-RKLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEG 298 (455)
Q Consensus 223 ~~~~d~vV~AdG~~S~v-r~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (455)
++++|+||+|||.+|.+ ++.++........ ....+........... ...+.... ...+.+..+. .+....
T Consensus 219 ~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~g~~~~--~pl~~~ 292 (526)
T 2pyx_A 219 EISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANS---PIASCTHS-TAQPNGWIWD--IGLPTR 292 (526)
T ss_dssp EEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTC---CCCSSEEE-EEETTEEEEE--EECSSE
T ss_pred EEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCC---CCCCceeE-EecCCCeEEE--eeCCCc
Confidence 58999999999999999 6677765432221 1122222221111000 11122222 2333333333 343332
Q ss_pred eEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCCCcEEEEcCccccCCCCcCcc
Q 012845 299 EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFG 378 (455)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G 378 (455)
.....+ +... ..+++...+.+.+.+..............+++.......+. .+||+|||||||+++|+.|||
T Consensus 293 ~~~~~v-~~~~-----~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAh~~~P~~GqG 364 (526)
T 2pyx_A 293 KGVGYV-YSSS-----HTNDIDAQKTLFNYLGVDGAAADKLEPRQLAINPGYRAKCW--QNNCIAIGMAAGFIEPLEASA 364 (526)
T ss_dssp EEEEEE-ECTT-----TCCHHHHHHHHHHHHTCCHHHHHHCCCEEEECCCEEESCSE--ETTEEECGGGTEECCCTTCHH
T ss_pred eEEEEE-ecCC-----CCChHHHHHHHHHHHHhcCcccccCCceEEecccCcccccc--CCCEEEEEhhhcccCcccccc
Confidence 222211 1111 12334445555554422110110011123333333344444 399999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHH
Q 012845 379 MNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (455)
Q Consensus 379 ~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~ 430 (455)
+|+|++||..|+++|... ......+++.|++.|+++.+.+.++...+|..
T Consensus 365 i~~ai~da~~La~~L~~~--~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 414 (526)
T 2pyx_A 365 LALIEWTASTLAQQLPPN--RMVMDTISARVNERYQQHWQQIIDFLKLHYVI 414 (526)
T ss_dssp HHHHHHHHHHHHHTCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999888521 11235789999999999999999988888764
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=2.8e-28 Score=251.20 Aligned_cols=338 Identities=14% Similarity=0.133 Sum_probs=202.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHH--HHhcCCCcc----
Q 012845 43 VVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IERSQPPVD---- 113 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~--l~~~~~~~~---- 113 (455)
.+||+|||||++|+++|+.|++ .|++|+||||.+.+ ..+.+..+.+.....++.+ |+.+. +........
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~l-gi~~~~~~~~~~~~~~~~~~ 79 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYL-GLDEREWLPRCAGGYKLGIR 79 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHH-TCCHHHHHHHTTCEEECEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHc-CCCHHHHHHHcCCeEeccce
Confidence 4699999999999999999999 99999999998643 3345667788888999999 88764 444332111
Q ss_pred --cccc---eEEeecC-----CCCcc------------c------------cccCCC----cccc----c------c--c
Q 012845 114 --LWRK---FIYCTSV-----TGPIL------------G------------SVDHMQ----PQDF----E------K--V 143 (455)
Q Consensus 114 --~~~~---~~~~~~~-----~~~~~------------~------------~~~~~~----~~~~----~------~--~ 143 (455)
.|.. ..++... .+... . ...... ...+ . . .
T Consensus 80 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 159 (511)
T 2weu_A 80 FENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAE 159 (511)
T ss_dssp EESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGG
T ss_pred ecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccccccccc
Confidence 1110 0000000 00000 0 000000 0000 0 0 0
Q ss_pred cC--CccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCc--eEEEEEeccCCcc
Q 012845 144 VS--PVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC--INVIASFLKEGKC 219 (455)
Q Consensus 144 ~~--~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~ 219 (455)
.. .....+++|..|.+.|.+.+.+.|+ +++++ +|++++.++++ +.|++. +|.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~~~~~~v~~~---~g~- 215 (511)
T 2weu_A 160 QRAQFPYAYHFDADEVARYLSEYAIARGV-------------------RHVVD-DVQHVGQDERGWISGVHTK---QHG- 215 (511)
T ss_dssp CCSCCSCEEEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEES---SSC-
T ss_pred CcCCCCeeEEEcHHHHHHHHHHHHHHCCC-------------------EEEEC-eEeEEEEcCCCCEEEEEEC---CCC-
Confidence 00 1234678999999999999999887 89999 99999886555 334444 554
Q ss_pred eeEEEEeCEEEeecCCCchhhh-hcCCCccCC---cccceeEEEEEecCCcccccccCCCceEEEEEccCceEEEEeecC
Q 012845 220 TERNIQCNILIGTDGAGSTVRK-LVGIDLVGE---KDLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDL 295 (455)
Q Consensus 220 ~~~~~~~d~vV~AdG~~S~vr~-~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (455)
++++|+||+|||.+|.+++ .++...... ......+......... ....+.. .....+.+..+++ |.
T Consensus 216 ---~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~g~~~~~--P~ 285 (511)
T 2weu_A 216 ---EISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPREND----EDMRPYT-TATAMSAGWMWTI--PL 285 (511)
T ss_dssp ---EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSG----GGCCSSE-EEEEETTEEEEEE--EC
T ss_pred ---EEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCC----CCCCcce-eceecCCCcEEEE--EC
Confidence 7899999999999999954 556544321 1112222222211111 0011222 2233444444443 33
Q ss_pred CCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCCCcEEEEcCccccCCCCc
Q 012845 296 KEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAG 375 (455)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~ 375 (455)
.+ +..+.+.+.. ...+++...+.+.+.++..+...+ ...+++.....+.+. .+|+++||||||+++|+.
T Consensus 286 ~~-~~~~g~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~rv~liGDAAh~~~P~~ 354 (511)
T 2weu_A 286 FK-RDGNGYVYSD-----EFISPEEAERELRSTVAPGRDDLE---ANHIQMRIGRNERTW--INNCVAVGLSAAFVEPLE 354 (511)
T ss_dssp SS-EEEEEEEECT-----TTSCHHHHHHHHHHHHCTTCTTSC---CEEEECCCEEESCSE--ETTEEECGGGTEECCGGG
T ss_pred CC-ceEEEEEECC-----CCCCHHHHHHHHHHHhCccccccc---ceeEEeecccccccc--CCCEEEEechhhccCccc
Confidence 33 3333322221 123455566666666654422111 111222222333433 389999999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHH
Q 012845 376 GFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (455)
Q Consensus 376 G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~ 430 (455)
|+|+++|++||..|+++|.+ +.....+|+.|++.|+++.+.+.++...+|..
T Consensus 355 g~G~~~a~~da~~La~~l~~---~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 406 (511)
T 2weu_A 355 STGIFFIQHAIEQLVKHFPG---ERWDPVLISAYNERMAHMVDGVKEFLVLHYKG 406 (511)
T ss_dssp CCHHHHHHHHHHHHHHTCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999998863 34456899999999999999999888777763
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=4.2e-28 Score=251.30 Aligned_cols=339 Identities=13% Similarity=0.132 Sum_probs=203.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCcccccChhHHH-HHHhhhchHHH--HHhcCCCcc-
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVD- 113 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~~~~~~~~~~l~~~~~~-~l~~~~gl~~~--l~~~~~~~~- 113 (455)
+..+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.+..+.+.... +++.+ |+.+. +........
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~l-G~~~~~~~~~~~~~~~~ 80 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFL-GIPEREWMPQVNGAFKA 80 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHH-TCCHHHHGGGGTCEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHh-CCCHHHHHHhcCchhhC
Confidence 346899999999999999999999 999999999976543 3346778888888 89988 88754 333222111
Q ss_pred -----cccce------EEeecCCCCccccccCCC-------------ccc--------------------cccccCCccc
Q 012845 114 -----LWRKF------IYCTSVTGPILGSVDHMQ-------------PQD--------------------FEKVVSPVSV 149 (455)
Q Consensus 114 -----~~~~~------~~~~~~~~~~~~~~~~~~-------------~~~--------------------~~~~~~~~~~ 149 (455)
.|... .......|... ...... ... ..........
T Consensus 81 g~~~~~w~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 81 AIKFVNWRKSPDPSRDDHFYHLFGNVP-NCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp EEEEESCSSSCCTTSCCEEEEESSCCC-EETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CccccCcCcccccCCCCceECCCCccC-ccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 11100 00000111100 000000 000 0000011234
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCce--EEEEEeccCCcceeEEEEeC
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCI--NVIASFLKEGKCTERNIQCN 227 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~--~v~~~~~~~g~~~~~~~~~d 227 (455)
.++++..|.+.|.+.+.+.|+ +++.+ +|+++..++++. .|.+. +|. ++++|
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~g~~~~v~~~---~g~----~i~ad 212 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGV-------------------NRVVD-EVVDVRLNNRGYISNLLTK---EGR----TLEAD 212 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEET---TSC----EECCS
T ss_pred EEEeHHHHHHHHHHHHHHCCC-------------------EEEEe-eEeEEEEcCCCcEEEEEEC---CCc----EEEeC
Confidence 678999999999999999886 88899 899998765543 34443 553 78999
Q ss_pred EEEeecCCCchhhh-hcCCCccCCcc---cceeEEEEEecCCcccccccCCCceEEEEEccCceEEEEeecCCCCeEEEE
Q 012845 228 ILIGTDGAGSTVRK-LVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQ 303 (455)
Q Consensus 228 ~vV~AdG~~S~vr~-~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (455)
+||+|||.+|.+|+ .++..+..... ....+.......... ....+... ....+.+..+.++. .+. ..+.
T Consensus 213 ~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~g~~~~~p~--~~~-~~~g 285 (538)
T 2aqj_A 213 LFIDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDAR---DGVEPYTS-SIAMNSGWTWKIPM--LGR-FGSG 285 (538)
T ss_dssp EEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHH---HCCCSSEE-EEECSSEEEEEEEE--TTE-EEEE
T ss_pred EEEECCCCchhhHHHHhCCCccccccccccceEEEEecccCCcc---cCCCCcee-eeecCCceEEEecC--CCc-eEEE
Confidence 99999999999954 45654322211 112222222111000 00111111 22334444344333 332 2222
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCCCcEEEEcCccccCCCCcCccchhhH
Q 012845 304 VPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGV 383 (455)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al 383 (455)
..+.. ...+++...+.+.+.+..... .....+++.......+. .+||+|||||||+++|+.|||+|+|+
T Consensus 286 ~v~~~-----~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~--~grvvliGDAAh~~~P~~gqG~~~a~ 354 (538)
T 2aqj_A 286 YVFSS-----HFTSRDQATADFLKLWGLSDN----QPLNQIKFRVGRNKRAW--VNNCVSIGLSSCFLEPLESTGIYFIY 354 (538)
T ss_dssp EEECT-----TTSCHHHHHHHHHHHHTCCTT----CCCEEEECCCEEESCSE--ETTEEECGGGTEECCGGGSCHHHHHH
T ss_pred EEEcC-----CCCChHHHHHHHHHHhcCCCC----CCceEEeeccccccccc--cCCEEEEcccccccCcchhccHHHHH
Confidence 22211 112445566666666643211 11122333333344444 39999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHH
Q 012845 384 QDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (455)
Q Consensus 384 ~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~ 430 (455)
+||..|+++|. .+.....+|+.|++.|+++.+.+.++...+|..
T Consensus 355 ~da~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 355 AALYQLVKHFP---DTSFDPRLSDAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp HHHHHHHHTCC---BTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998875 234456899999999999999988877777753
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.96 E-value=6.7e-28 Score=250.17 Aligned_cols=339 Identities=11% Similarity=0.073 Sum_probs=205.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCcccccChhHHH-HHHhhhchHHH--HHhcCCCc---
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPV--- 112 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~~~~~~~~~~l~~~~~~-~l~~~~gl~~~--l~~~~~~~--- 112 (455)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+. .+.+..+.+.+.. +++.+ |+.+. +.......
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~l-Gi~~~~~~~~~~~~~~~g 101 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFL-GIPEDEWMRECNASYKVA 101 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHH-TCCHHHHHHHTTCEEECE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHh-CCChHHHHHhcCCeEEEe
Confidence 46899999999999999999999 999999999976543 3346788888888 99999 98765 54432211
Q ss_pred ---ccccce---------------EEeecCCCCcc-------ccc----c-----CCC----------cccc-------c
Q 012845 113 ---DLWRKF---------------IYCTSVTGPIL-------GSV----D-----HMQ----------PQDF-------E 141 (455)
Q Consensus 113 ---~~~~~~---------------~~~~~~~~~~~-------~~~----~-----~~~----------~~~~-------~ 141 (455)
..|... .+.. ..+... ... . ... ..+. .
T Consensus 102 ~~~~~w~~~~~~~~~~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (550)
T 2e4g_A 102 IKFINWRTAGEGTSEARELDGGPDHFYH-SFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLD 180 (550)
T ss_dssp EEEESSSSCCCCCSSCCEETTEESEEEE-ESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTT
T ss_pred eeEeecccccccccccccccCCCCeeEe-cCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhc
Confidence 112110 0000 001000 000 0 000 0000 0
Q ss_pred cccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceEEeccEEEEeeecCCc--eEEEEEeccCCc
Q 012845 142 KVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC--INVIASFLKEGK 218 (455)
Q Consensus 142 ~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~ 218 (455)
.........++++..|.+.|.+.+.+. |+ +++++ +|+++..++++ +.|.+. +|.
T Consensus 181 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv-------------------~i~~~-~V~~i~~~~~g~~~~v~~~---~G~ 237 (550)
T 2e4g_A 181 GSKVTNYAWHFDAHLVADFLRRFATEKLGV-------------------RHVED-RVEHVQRDANGNIESVRTA---TGR 237 (550)
T ss_dssp SCBCSCCEEEECHHHHHHHHHHHHHHHSCC-------------------EEEEC-CEEEEEECTTSCEEEEEET---TSC
T ss_pred CCCCCCcceEEcHHHHHHHHHHHHHhcCCc-------------------EEEEC-eEeEEEEcCCCCEEEEEEC---CCC
Confidence 000112246689999999999999998 87 89999 99999876554 334443 554
Q ss_pred ceeEEEEeCEEEeecCCCchh-hhhcCCCccCCc---ccceeEEEEEecCCcccccccCCCceEEEEEccCceEEEEeec
Q 012845 219 CTERNIQCNILIGTDGAGSTV-RKLVGIDLVGEK---DLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHD 294 (455)
Q Consensus 219 ~~~~~~~~d~vV~AdG~~S~v-r~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (455)
++.+|+||+|||.+|.+ ++.++..+.... .....+......... .....+... ....+.+..+.++.
T Consensus 238 ----~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~g~~~~ipl- 308 (550)
T 2e4g_A 238 ----VFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDD---ANGVEPFTS-AIAMKSGWTWKIPM- 308 (550)
T ss_dssp ----EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHH---HHCCCSSEE-EEECSSEEEEEEEC-
T ss_pred ----EEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCC---cccCCCcee-eeecCCceEEEccC-
Confidence 78999999999999998 556665433221 111122211111100 000112222 22223333333333
Q ss_pred CCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHhhCCCCCCeeEEEeeceEeceeeecccccCCCcEEEEcCccccCCCC
Q 012845 295 LKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPA 374 (455)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAAh~~~P~ 374 (455)
.. .......+.. ...+++...+.+.+.++..+...+ ...+++.....+.+. .+|+++||||||+++|+
T Consensus 309 -~~-~~~~g~v~~~-----~~~~~~~~~~~l~~~~~~~p~l~~---~~~i~~~~~~~~~~~--~~rvvliGDAAh~~~P~ 376 (550)
T 2e4g_A 309 -LG-RFGTGYVYSS-----RFATEDEAVREFCEMWHLDPETQP---LNRIRFRVGRNRRAW--VGNCVSIGTSSCFVEPL 376 (550)
T ss_dssp -SS-EEEEEEEECT-----TTSCHHHHHHHHHHHTTCCTTTSC---CEEEECCCEEESCSE--ETTEEECSTTTEECCGG
T ss_pred -CC-ccceEEEEec-----CCCChHHHHHHHHHhhCcCcccCC---CceEEecCCCccccc--cCCEEEEehhhcccCcc
Confidence 22 2222222211 112455566666666654321111 111222223333333 38999999999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhHHHhhhHHHHHhHHhHHHHHHH
Q 012845 375 GGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (455)
Q Consensus 375 ~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~s~~~~~~ 430 (455)
+|||+++|++||..|+++|.+ +.....+|+.|++.|+++...+.++...+|..
T Consensus 377 ~GqGi~~a~~da~~La~~L~~---~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~ 429 (550)
T 2e4g_A 377 ESTGIYFVYAALYQLVKHFPD---KSLNPVLTARFNREIETMFDDTRDFIQAHFYF 429 (550)
T ss_dssp GSCHHHHHHHHHHHHHHTCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988752 34567899999999999999999998888874
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.93 E-value=1.3e-25 Score=226.11 Aligned_cols=323 Identities=13% Similarity=0.013 Sum_probs=175.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC----cccccChhHHHHHHhhhch--HHHHHhcCCCcccc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAHFINNRYALVFRKLDGL--AEEIERSQPPVDLW 115 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~----~~~~l~~~~~~~l~~~~gl--~~~l~~~~~~~~~~ 115 (455)
+++||+||||||+|+++|+.|+++|++|+||||.+.+.... ....+...++..++.+ |+ +.... .+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~l-g~~~~~~~~---~~~--- 93 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVAL-DVNEWPSEE---FGY--- 93 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHT-TCCCSCHHH---HCE---
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhc-Chhhhhhhc---ccc---
Confidence 45799999999999999999999999999999987432211 1223345566666665 43 11111 011
Q ss_pred cceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEecc
Q 012845 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (455)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 195 (455)
..........+ . .++.... ......+++..+...|.+.+.+.|+ ++++..
T Consensus 94 ~~~~~~~~~~~-~---------~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv-------------------~v~~~~ 143 (430)
T 3ihm_A 94 FGHYYYVGGPQ-P---------MRFYGDL-KAPSRAVDYRLYQPMLMRALEARGG-------------------KFCYDA 143 (430)
T ss_dssp EEEEEEECSSS-C---------EEEEEEE-EEEEBEECHHHHHHHHHHHHHHTTC-------------------EEEECC
T ss_pred cceeEEECCCC-c---------cccchhc-CCcceeecHHHHHHHHHHHHHHcCC-------------------EEEEEe
Confidence 11111111110 0 0110000 1123567889999999999999886 665521
Q ss_pred -EEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCC-CccCCcccceeEEEEEecCCcccccccC
Q 012845 196 -ECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGI-DLVGEKDLQKLVSVHFLSKDLGDYLLNE 273 (455)
Q Consensus 196 -~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (455)
.+.+++. - ...+|+||+|||.+|.++..... ........+......+...... ..
T Consensus 144 v~~~~l~~--------------~-----~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~----~~ 200 (430)
T 3ihm_A 144 VSAEDLEG--------------L-----SEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKE----AP 200 (430)
T ss_dssp CCGGGHHH--------------H-----HTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCC----CS
T ss_pred cchhhhhh--------------h-----cccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCC----CC
Confidence 0111100 0 11489999999999988643311 1111222222222222222111 11
Q ss_pred CCceEEEEEccCceEEEEeecCCCCeEEEEeecCCCCCC---CCC----CCHHH----HHHHHHHhhCCC---C---C--
Q 012845 274 RPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQN---LED----FSPEI----CEKLIFKLVGWE---L---S-- 334 (455)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~----~~~~l~~~~~~~---~---~-- 334 (455)
.....+.++.+.+..++++.....+...+.+.+..+... ... .+++. +.+.+..+.++. . .
T Consensus 201 ~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (430)
T 3ihm_A 201 IRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFD 280 (430)
T ss_dssp SCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCE
T ss_pred cCeeeeeecCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhc
Confidence 233444455544444444433233333332222222211 111 13332 233333322110 0 1
Q ss_pred ----CeeEEEeeceEeceeeecccccCCCcEEE-EcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcCCCCchhhhhH
Q 012845 335 ----DIDVIDIKPWVMHAEVAEKFLCCYNQIIL-AGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTY 409 (455)
Q Consensus 335 ----~~~~~~~~~~~~~~~~~~~~~~~~~~vvl-iGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~~~~~~al~~Y 409 (455)
...+.....|+........|. .++++| +|||||.++|++|||+|+||+||..|+++|.+. .+...+|..|
T Consensus 281 ~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~~~~~~~ 355 (430)
T 3ihm_A 281 LANSSLDILQGGVVPAFRDGHATLN--NGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYDLRFSEH 355 (430)
T ss_dssp ESSSTTSEEEECCCCEEBCSEEECT--TSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCSHHHHHH
T ss_pred cccCccceeecceeecccccccccC--CCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHHHHHHHH
Confidence 111222223333333344554 488888 999999999999999999999999999999874 3478999999
Q ss_pred HHhhh-HHHHHhHHhHHHHHH
Q 012845 410 ETERK-PIAEFNTALSVQNFR 429 (455)
Q Consensus 410 ~~~r~-~~~~~~~~~s~~~~~ 429 (455)
+..|+ .+++...++++....
T Consensus 356 ~~~r~~~~~~~~~~~~~~~~~ 376 (430)
T 3ihm_A 356 LERRRQDRVLCATRWTNFTLS 376 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 99998 777777777766643
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.91 E-value=4e-24 Score=218.81 Aligned_cols=316 Identities=20% Similarity=0.214 Sum_probs=181.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
...+||+|||||++|+++|+.|++.|++|+||||.+.+.. .....+.+.+++.+..+ |+++.... +
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~-g~~~~~~~----------~-- 155 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRAL-GAKKFYGR----------F-- 155 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTT-THHHHCTT----------T--
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHc-CCcccccc----------c--
Confidence 3568999999999999999999999999999999876532 24456778888888888 77642100 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
. ......+++..+.+.|.+.+.+.|+ +|+++++|+++
T Consensus 156 --------~----------------~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i 192 (497)
T 2bry_A 156 --------C----------------TGTLDHISIRQLQLLLLKVALLLGV-------------------EIHWGVKFTGL 192 (497)
T ss_dssp --------T----------------CTTCCEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEEE
T ss_pred --------c----------------ccccccCCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 0 0001246788999999999998886 99999999999
Q ss_pred eec---CCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCCccCCcccceeEEEEEecCCcccccccCCCce
Q 012845 201 SAT---DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (455)
Q Consensus 201 ~~~---~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (455)
+.+ ++.+.|++....+| ...++.+|+||+|||.+|.+|+..+....+...+......... ............+.
T Consensus 193 ~~~~~~~~~~~v~~~~~~~g--~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~~~~~G~ 269 (497)
T 2bry_A 193 QPPPRKGSGWRAQLQPNPPA--QLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNG-RTVEETQVPEISGV 269 (497)
T ss_dssp ECCCSTTCCBEEEEESCCCH--HHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECC-CCHHHHTSCCBCC-
T ss_pred EEecCCCCEEEEEEEECCCC--CEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeee-ccccccchhhcCce
Confidence 864 34566666411022 1125789999999999999998776555544332222111100 00000000001111
Q ss_pred EEEEEcc---------Cc--eEEEEeecCCCCeEEEEee---------cCCCCC------CCCCCCHHHHHH---HHHHh
Q 012845 278 LFFIFNT---------EA--IGVLVAHDLKEGEFILQVP---------FYPPQQ------NLEDFSPEICEK---LIFKL 328 (455)
Q Consensus 278 ~~~~~~~---------~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~---~l~~~ 328 (455)
.+ .+.+ .+ ...++..+.....+..... +..... .....+.+.+.. ....+
T Consensus 270 ~~-~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 348 (497)
T 2bry_A 270 AR-IYNQKFFQSLLKATGIDLENIVYYKDETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADF 348 (497)
T ss_dssp ----CCSSHHHHHHHHHCCCEEEEEEEESSEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHH
T ss_pred EE-ecChhhhHhHHhhcCCCcccccccCCCeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhcccccc
Confidence 11 0000 00 1111111111111111100 000000 001122222111 01111
Q ss_pred h--------C---CCCC--Ce---eEEEeeceEeceeeecccccCCCc-EEEEcCccccCCCCcCccchhhHHHHHHHHH
Q 012845 329 V--------G---WELS--DI---DVIDIKPWVMHAEVAEKFLCCYNQ-IILAGDACHRFPPAGGFGMNTGVQDAHNLAW 391 (455)
Q Consensus 329 ~--------~---~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~-vvliGDAAh~~~P~~G~G~~~Al~da~~La~ 391 (455)
. . .... .. ++.....|++.....+.|.. +| ++|+|||+|...|-.|||+|.++.||..|++
T Consensus 349 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~~~--gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~ 426 (497)
T 2bry_A 349 ATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGA--RLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAW 426 (497)
T ss_dssp HTTTTTCSCCBCBCTTSSBCEEEEECSEEEEESCSEEEEEETTE--EEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHH
T ss_pred chhhccccchhhhhccCCCCCceeeeEEEEecchhhHHHHhcCC--cccceEeccccccCcCccccchhhHHHHHHHHHH
Confidence 1 1 1111 11 22334456666777788875 87 9999999994443399999999999999999
Q ss_pred HHHHhHcCCCCchhhhhHHHhhhHHHHHhHHh
Q 012845 392 KIASVLKDIAPASILNTYETERKPIAEFNTAL 423 (455)
Q Consensus 392 ~L~~~~~~~~~~~al~~Y~~~r~~~~~~~~~~ 423 (455)
.|...+++....+.| ..|++..+.+.+.
T Consensus 427 ~l~~~~~g~~~~~~l----~~r~~~~~~l~~~ 454 (497)
T 2bry_A 427 MVKRWAEGAGPLEVL----AERESLYQLLSQT 454 (497)
T ss_dssp HHHHHHTTCCHHHHH----HHHHHHHTTGGGC
T ss_pred HHHHHhCCCCccchh----hhHHHHhhhhhhc
Confidence 999987665555555 6777766654443
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.77 E-value=4e-17 Score=158.37 Aligned_cols=190 Identities=14% Similarity=0.107 Sum_probs=97.9
Q ss_pred eEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCCC-----ccCCcccceeEEEEEecC
Q 012845 190 EILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID-----LVGEKDLQKLVSVHFLSK 264 (455)
Q Consensus 190 ~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~~-----~~~~~~~~~~~~~~~~~~ 264 (455)
+|+++++|++++.+++++.|++. +|+ ....+|+||+|+|.+|.+|..-..+ ..... +.....+.....
T Consensus 121 ~i~~~~~v~~i~~~~~~~~v~~~---~g~---~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 193 (336)
T 1yvv_A 121 PVSFSCRITEVFRGEEHWNLLDA---EGQ---NHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVK-MDPTWAVALAFE 193 (336)
T ss_dssp CEECSCCEEEEEECSSCEEEEET---TSC---EEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCC-EEEEEEEEEEES
T ss_pred cEEecCEEEEEEEeCCEEEEEeC---CCc---CccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcC-ccceeEEEEEec
Confidence 89999999999998888887765 664 1335999999999999887542211 11111 222222222222
Q ss_pred CcccccccCCCceEEEEEccCceEEEEee---cCCCC---eEEEEeecCCCCCCCCCCCHHHHHHHHHH----hhCCCCC
Q 012845 265 DLGDYLLNERPGMLFFIFNTEAIGVLVAH---DLKEG---EFILQVPFYPPQQNLEDFSPEICEKLIFK----LVGWELS 334 (455)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 334 (455)
... ..+...++ ...+...++... +.... .+++...-. ......+.+++.+.+.+.+ .++....
T Consensus 194 ~~~-----~~~~~~~~-~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~ 266 (336)
T 1yvv_A 194 TPL-----QTPMQGCF-VQDSPLDWLARNRSKPERDDTLDTWILHATSQ-WSRQNLDASREQVIEHLHGAFAELIDCTMP 266 (336)
T ss_dssp SCC-----SCCCCEEE-ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHH-HHHHTTTSCHHHHHHHHHHHHHTTCSSCCC
T ss_pred CCC-----CCCCCeEE-eCCCceeEEEecCcCCCCCCCCcEEEEEeCHH-HHHHHHhCCHHHHHHHHHHHHHHHhCCCCC
Confidence 111 01111111 122223333221 22222 233332200 0112234455544444333 3332222
Q ss_pred CeeEEEeeceEeceee----ecccccCCCcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHcC
Q 012845 335 DIDVIDIKPWVMHAEV----AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKD 399 (455)
Q Consensus 335 ~~~~~~~~~~~~~~~~----~~~~~~~~~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~~ 399 (455)
.........|...... ........+|++|+|||+| |.|++.|+.++..||+.|.+.+++
T Consensus 267 ~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 267 APVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 2222333334322111 1111112489999999996 459999999999999999887644
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.66 E-value=2.3e-15 Score=148.67 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=56.8
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~v 229 (455)
..++...+.+.|.+.+.+.|+ +++.+++|++++.+++.+.|.+. +| ++.+|.|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~v~~~---~g-----~~~a~~v 211 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGA-------------------EIFEHTPVLHVERDGEALFIKTP---SG-----DVWANHV 211 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTC-------------------EEETTCCCCEEECSSSSEEEEET---TE-----EEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCC-------------------EEEcCCcEEEEEEECCEEEEEcC---Cc-----eEEcCEE
Confidence 456778899999999999887 99999999999887777755443 33 6799999
Q ss_pred EeecCCCch-hhhhcCCC
Q 012845 230 IGTDGAGST-VRKLVGID 246 (455)
Q Consensus 230 V~AdG~~S~-vr~~l~~~ 246 (455)
|.|+|.+|. +.+.++..
T Consensus 212 V~A~G~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 212 VVASGVWSGMFFKQLGLN 229 (382)
T ss_dssp EECCGGGTHHHHHHTTCC
T ss_pred EECCChhHHHHHHhcCCC
Confidence 999999987 77777643
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.63 E-value=9.5e-15 Score=144.25 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=56.4
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNI 228 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~ 228 (455)
..++...+.+.|.+.+.+.|+ +++.+++|++++.+++.+. |.+. +| ++.+|.
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~v~gv~~~---~g-----~i~a~~ 196 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGA-------------------KLLEYTEVKGFLIENNEIKGVKTN---KG-----IIKTGI 196 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEET---TE-----EEECSE
T ss_pred eeECHHHHHHHHHHHHHHCCC-------------------EEECCceEEEEEEECCEEEEEEEC---Cc-----EEECCE
Confidence 346778899999999999887 9999999999998877766 5543 44 689999
Q ss_pred EEeecCCCc-hhhhhcCCC
Q 012845 229 LIGTDGAGS-TVRKLVGID 246 (455)
Q Consensus 229 vV~AdG~~S-~vr~~l~~~ 246 (455)
||.|+|.+| .+.+.++..
T Consensus 197 VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 197 VVNATNAWANLINAMAGIK 215 (382)
T ss_dssp EEECCGGGHHHHHHHHTCC
T ss_pred EEECcchhHHHHHHHcCCC
Confidence 999999998 466766643
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.62 E-value=9.8e-15 Score=145.19 Aligned_cols=71 Identities=11% Similarity=0.221 Sum_probs=55.8
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCce-EEEEEeccCCcceeEEEEeCE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCI-NVIASFLKEGKCTERNIQCNI 228 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~~~d~ 228 (455)
..++...+.+.|.+.+++.|+ +++++++|+++..+++.+ .+.+. +| ++.+|.
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~~v~~~---~g-----~~~a~~ 221 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGV-------------------DIIQNCEVTGFIKDGEKVTGVKTT---RG-----TIHAGK 221 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEET---TC-----CEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHCCC-------------------EEEcCCeEEEEEEeCCEEEEEEeC---Cc-----eEECCE
Confidence 445667899999999999887 999999999998876653 34433 44 578999
Q ss_pred EEeecCCCc-hhhhhcCCCc
Q 012845 229 LIGTDGAGS-TVRKLVGIDL 247 (455)
Q Consensus 229 vV~AdG~~S-~vr~~l~~~~ 247 (455)
||.|+|.+| .+++.++...
T Consensus 222 vV~a~G~~s~~l~~~~g~~~ 241 (405)
T 2gag_B 222 VALAGAGHSSVLAEMAGFEL 241 (405)
T ss_dssp EEECCGGGHHHHHHHHTCCC
T ss_pred EEECCchhHHHHHHHcCCCC
Confidence 999999998 5788777554
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.60 E-value=2.5e-14 Score=133.45 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=34.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
++||+|||||||||++|+.|+++|++|+||||.+.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 5899999999999999999999999999999988764
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.58 E-value=2.5e-13 Score=134.27 Aligned_cols=173 Identities=14% Similarity=0.194 Sum_probs=99.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCc----cccc------ChhHHHH-HHhhhchHHHHHhc-CC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ----AHFI------NNRYALV-FRKLDGLAEEIERS-QP 110 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~----~~~l------~~~~~~~-l~~~~gl~~~l~~~-~~ 110 (455)
++||+|||||++|+++|+.|+++|++|+|||+.......+. +..+ .+...++ ...+ .+++++.+. +.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ-ELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH-HHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH-HHHHHHHHHhCC
Confidence 58999999999999999999999999999999875541111 1111 1111222 2222 445555432 11
Q ss_pred Cc-ccccceEEeecCC--------------CCccccc---------cCCCcccc-ccccCCccccccchhhHHHHHHHHH
Q 012845 111 PV-DLWRKFIYCTSVT--------------GPILGSV---------DHMQPQDF-EKVVSPVSVAHFSQYKLNKLLLKQL 165 (455)
Q Consensus 111 ~~-~~~~~~~~~~~~~--------------~~~~~~~---------~~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~ 165 (455)
.. .......+..... |...... +....... .... ......++...+.+.|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIF-EPNSGVLFSENCIRAYRELA 160 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEE-ETTCEEEEHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEE-eCCCcEEeHHHHHHHHHHHH
Confidence 11 0000111111100 0000000 00000000 0000 01123456678999999999
Q ss_pred HhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch-hhhhcC
Q 012845 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST-VRKLVG 244 (455)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~-vr~~l~ 244 (455)
++.|+ +++.+++|++++.+++++.+.+. ++ ++.+|.||.|+|.+|. +.+.++
T Consensus 161 ~~~Gv-------------------~i~~~~~v~~i~~~~~~~~v~~~---~g-----~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 161 EARGA-------------------KVLTHTRVEDFDISPDSVKIETA---NG-----SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HHTTC-------------------EEECSCCEEEEEECSSCEEEEET---TE-----EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HHCCC-------------------EEEcCcEEEEEEecCCeEEEEeC---CC-----EEEeCEEEEecCccHHHHhhhhc
Confidence 99887 99999999999987777666543 33 6899999999999975 455554
No 36
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.58 E-value=2.1e-13 Score=135.39 Aligned_cols=176 Identities=14% Similarity=0.158 Sum_probs=100.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcc----cccC-----hhHH-HHHHhhhchHHHHHhc-CC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQA----HFIN-----NRYA-LVFRKLDGLAEEIERS-QP 110 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~----~~l~-----~~~~-~~l~~~~gl~~~l~~~-~~ 110 (455)
..+||+|||||++|+++|+.|+++|++|+|+||.......+.. ..+. +... ..+..+ .+++++.+. +.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 81 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETL-PLWRALESRCER 81 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHH-HHHHHHHHHHTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHH-HHHHHHHHHhCc
Confidence 4589999999999999999999999999999998765421211 1111 1111 112223 444444321 11
Q ss_pred CcccccceEEeecCCC----Cccc-------cccCC----Ccccc----cccc-C-------CccccccchhhHHHHHHH
Q 012845 111 PVDLWRKFIYCTSVTG----PILG-------SVDHM----QPQDF----EKVV-S-------PVSVAHFSQYKLNKLLLK 163 (455)
Q Consensus 111 ~~~~~~~~~~~~~~~~----~~~~-------~~~~~----~~~~~----~~~~-~-------~~~~~~i~r~~l~~~L~~ 163 (455)
................ ..+. ..... ...+. .... . ......++...+.+.|.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 82 RLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred cHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 1100000011111110 0000 00000 00000 0000 0 001224556678889999
Q ss_pred HHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc-hhhhh
Q 012845 164 QLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS-TVRKL 242 (455)
Q Consensus 164 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S-~vr~~ 242 (455)
.+.+.|+ +|+++++|++++.+++++.|.+. ++ ++.+|.||.|+|.+| .+++.
T Consensus 162 ~a~~~Gv-------------------~i~~~~~V~~i~~~~~~v~v~t~---~g-----~i~a~~VV~A~G~~s~~l~~~ 214 (397)
T 2oln_A 162 LAQAAGA-------------------TLRAGETVTELVPDADGVSVTTD---RG-----TYRAGKVVLACGPYTNDLLEP 214 (397)
T ss_dssp HHHHTTC-------------------EEEESCCEEEEEEETTEEEEEES---SC-----EEEEEEEEECCGGGHHHHHGG
T ss_pred HHHHcCC-------------------EEECCCEEEEEEEcCCeEEEEEC---CC-----EEEcCEEEEcCCcChHHHhhh
Confidence 9988887 99999999999987777665433 33 689999999999995 47777
Q ss_pred cCC
Q 012845 243 VGI 245 (455)
Q Consensus 243 l~~ 245 (455)
++.
T Consensus 215 ~g~ 217 (397)
T 2oln_A 215 LGA 217 (397)
T ss_dssp GTC
T ss_pred cCC
Confidence 764
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.55 E-value=9.8e-14 Score=135.88 Aligned_cols=73 Identities=11% Similarity=0.172 Sum_probs=58.2
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCc-eEEEEEeccCCcceeEEEEeCE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNI 228 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~~~d~ 228 (455)
..++...+.+.|.+.+++.|+ +|+++++|+++..++++ +.|.+. +|+ ..++.+|.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~~~a~~ 200 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGA-------------------QLVFHTPLIAGRVRPEGGFELDFG---GAE--PMTLSCRV 200 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECTTSSEEEEEC---TTS--CEEEEEEE
T ss_pred EEECHHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEEcCCceEEEEEC---CCc--eeEEEeCE
Confidence 346778899999999999987 99999999999987665 666554 553 23789999
Q ss_pred EEeecCCCch-hhhhc-CCC
Q 012845 229 LIGTDGAGST-VRKLV-GID 246 (455)
Q Consensus 229 vV~AdG~~S~-vr~~l-~~~ 246 (455)
||.|+|.+|. +.+.+ |.+
T Consensus 201 VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 201 LINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEECCGGGHHHHHHTEETSC
T ss_pred EEECCCcchHHHHHHhcCCC
Confidence 9999999994 67777 654
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.54 E-value=3.8e-13 Score=132.44 Aligned_cols=70 Identities=20% Similarity=0.358 Sum_probs=56.9
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~v 229 (455)
..++...+...|.+.+++.|+ +|+++++|+++..+++++.|.+. +| ++.+|.|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~~~V~t~---~g-----~i~a~~V 201 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQG-------------------QVLCNHEALEIRRVDGAWEVRCD---AG-----SYRAAVL 201 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEESSCCCCEEEEETTEEEEECS---SE-----EEEESEE
T ss_pred ceECHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEeCCeEEEEeC---CC-----EEEcCEE
Confidence 446778899999999999887 99999999999988877666543 44 6899999
Q ss_pred EeecCCCch-hhhhcCCC
Q 012845 230 IGTDGAGST-VRKLVGID 246 (455)
Q Consensus 230 V~AdG~~S~-vr~~l~~~ 246 (455)
|.|+|.+|. +.+.++..
T Consensus 202 V~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 202 VNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EECCGGGHHHHHHHHTCC
T ss_pred EECCChhHHHHHHHhCCC
Confidence 999999984 66766643
No 39
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.52 E-value=8.4e-14 Score=138.81 Aligned_cols=143 Identities=17% Similarity=0.218 Sum_probs=91.2
Q ss_pred cCCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC----ccc-c-----cC---------hhHHHHHHhhh
Q 012845 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAH-F-----IN---------NRYALVFRKLD 99 (455)
Q Consensus 39 ~~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~----~~~-~-----l~---------~~~~~~l~~~~ 99 (455)
||+.++||+|||||++|+++|+.|+++|++|+||||.+.+..+. .+. . .. ......+..+
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~- 101 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARY- 101 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHS-
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhc-
Confidence 44667999999999999999999999999999999998753211 000 0 00 0011222222
Q ss_pred chH---HHHHhcCCCcccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCC
Q 012845 100 GLA---EEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSE 176 (455)
Q Consensus 100 gl~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~ 176 (455)
... +.+...+.+.. ....+ ..........+.+.|.+.+++.|+
T Consensus 102 ~~~~~~~~~~~~Gi~~~--------~~~~g--------------------~~~~~~~~~~l~~~L~~~l~~~Gv------ 147 (417)
T 3v76_A 102 RPQDFVALVERHGIGWH--------EKTLG--------------------QLFCDHSAKDIIRMLMAEMKEAGV------ 147 (417)
T ss_dssp CHHHHHHHHHHTTCCEE--------ECSTT--------------------EEEESSCHHHHHHHHHHHHHHHTC------
T ss_pred CHHHHHHHHHHcCCCcE--------EeeCC--------------------EEeeCCCHHHHHHHHHHHHHHCCC------
Confidence 111 11122221110 00000 001123567899999999999887
Q ss_pred CcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 177 GTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 177 ~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+|+++++|+++..+++++.|.+. +| ++.+|.||.|+|.+|
T Consensus 148 -------------~i~~~~~V~~i~~~~~~~~V~~~---~g-----~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 148 -------------QLRLETSIGEVERTASGFRVTTS---AG-----TVDAASLVVASGGKS 187 (417)
T ss_dssp -------------EEECSCCEEEEEEETTEEEEEET---TE-----EEEESEEEECCCCSS
T ss_pred -------------EEEECCEEEEEEEeCCEEEEEEC---Cc-----EEEeeEEEECCCCcc
Confidence 99999999999988877766654 44 689999999999999
No 40
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.46 E-value=2.5e-12 Score=112.95 Aligned_cols=117 Identities=23% Similarity=0.310 Sum_probs=86.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEeec
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~~ 123 (455)
+||+|||||++|+.+|..|++.|.+|+|+|+.+...... . . ...+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~---------------~-~-----------~~~~-------- 46 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV---------------S-R-----------VPNY-------- 46 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC---------------S-C-----------CCCS--------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc---------------h-h-----------hhcc--------
Confidence 689999999999999999999999999999986321000 0 0 0000
Q ss_pred CCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeec
Q 012845 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (455)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~ 203 (455)
.+ + + ..+....+.+.+.+.+++.|+ +++.+ +|++++.+
T Consensus 47 -~~-------------~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~v~~~-~v~~i~~~ 84 (180)
T 2ywl_A 47 -PG-------------L-----L---DEPSGEELLRRLEAHARRYGA-------------------EVRPG-VVKGVRDM 84 (180)
T ss_dssp -TT-------------C-----T---TCCCHHHHHHHHHHHHHHTTC-------------------EEEEC-CCCEEEEC
T ss_pred -CC-------------C-----c---CCCCHHHHHHHHHHHHHHcCC-------------------EEEeC-EEEEEEEc
Confidence 00 0 0 123456888899999999887 89999 99999887
Q ss_pred CCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCC
Q 012845 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGI 245 (455)
Q Consensus 204 ~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~ 245 (455)
++.+.+.+. +| ++.+|.||.|+|..+.+++.++.
T Consensus 85 ~~~~~v~~~---~g-----~i~ad~vI~A~G~~~~~~~~~g~ 118 (180)
T 2ywl_A 85 GGVFEVETE---EG-----VEKAERLLLCTHKDPTLPSLLGL 118 (180)
T ss_dssp SSSEEEECS---SC-----EEEEEEEEECCTTCCHHHHHHTC
T ss_pred CCEEEEEEC---CC-----EEEECEEEECCCCCCCccccCCC
Confidence 777666544 44 67999999999999988777764
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=5e-14 Score=142.21 Aligned_cols=163 Identities=18% Similarity=0.248 Sum_probs=94.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHH----------HHHHhhh---ch-HHHHH
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYA----------LVFRKLD---GL-AEEIE 106 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~----------~~l~~~~---gl-~~~l~ 106 (455)
.+++||+|||||++|+++|+.|+++|.+|+||||.+.+.. ...++..+. .++..++ .+ ...+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~---~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGR---KLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH---HHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCc---eeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 3468999999999999999999999999999999876531 111111000 1111110 00 00000
Q ss_pred hcCCCcccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCccccccccc
Q 012845 107 RSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLL 186 (455)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~ 186 (455)
.... ......+ ...|..+.. ....... + .......+.+.|.+.+++.|+
T Consensus 101 ~~~~-~~~~~~~----~~~G~~~~~------~~~g~~~-p---~~~~~~~l~~~L~~~~~~~GV---------------- 149 (447)
T 2i0z_A 101 IFNN-EDIITFF----ENLGVKLKE------EDHGRMF-P---VSNKAQSVVDALLTRLKDLGV---------------- 149 (447)
T ss_dssp HSCH-HHHHHHH----HHTTCCEEE------CGGGEEE-E---TTCCHHHHHHHHHHHHHHTTC----------------
T ss_pred hcCH-HHHHHHH----HhcCCceEE------eeCCEEE-C---CCCCHHHHHHHHHHHHHHCCC----------------
Confidence 0000 0000000 000000000 0000000 0 011356788999999999886
Q ss_pred ccceEEeccEEEEeeecCCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCc-----------hhhhhcCCCc
Q 012845 187 QGREILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS-----------TVRKLVGIDL 247 (455)
Q Consensus 187 ~~~~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S-----------~vr~~l~~~~ 247 (455)
+|+++++|+++..+++. +.|.+. +|. ++.+|.||.|+|.+| .+++.+|...
T Consensus 150 ---~i~~~~~V~~i~~~~~~v~~V~~~---~G~----~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 150 ---KIRTNTPVETIEYENGQTKAVILQ---TGE----VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp ---EEECSCCEEEEEEETTEEEEEEET---TCC----EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred ---EEEeCcEEEEEEecCCcEEEEEEC---CCC----EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 99999999999877665 445544 553 689999999999999 7888887653
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.46 E-value=1.1e-11 Score=121.76 Aligned_cols=167 Identities=14% Similarity=0.223 Sum_probs=95.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC----cccccC------hhHHH-HHHhhhchHHHHHhcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAHFIN------NRYAL-VFRKLDGLAEEIERSQPP 111 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~----~~~~l~------~~~~~-~l~~~~gl~~~l~~~~~~ 111 (455)
++||+|||||++|+++|+.|+++|++|+|||+.......+ .+..+. ..... ....+ .+++++.+.+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQ-MLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHH-HHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHH-HHHHHHHHhCCC
Confidence 5799999999999999999999999999999987653211 110111 11111 12222 445555421110
Q ss_pred cccc---cceEEeecCC-------------CCccccc---------cCC-CccccccccCCccccccchhhHHHHHHHHH
Q 012845 112 VDLW---RKFIYCTSVT-------------GPILGSV---------DHM-QPQDFEKVVSPVSVAHFSQYKLNKLLLKQL 165 (455)
Q Consensus 112 ~~~~---~~~~~~~~~~-------------~~~~~~~---------~~~-~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~ 165 (455)
...+ ....+..... |...... +.. ......... ......++...+.+.|.+.+
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~g~~~~~~l~~~l~~~~ 159 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLF-ETDSGFLRSELAIKTWIQLA 159 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEE-ESSCEEEEHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEE-eCCCcEEcHHHHHHHHHHHH
Confidence 0000 0011111000 0000000 000 000000000 01123456678999999999
Q ss_pred HhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+.|+ +++.+++|++++.+++++.+.+. +| ++.+|.||.|+|.+|.
T Consensus 160 ~~~G~-------------------~i~~~~~V~~i~~~~~~~~v~~~---~g-----~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 160 KEAGC-------------------AQLFNCPVTAIRHDDDGVTIETA---DG-----EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHTTC-------------------EEECSCCEEEEEECSSSEEEEES---SC-----EEEEEEEEECCGGGGG
T ss_pred HHCCC-------------------EEEcCCEEEEEEEcCCEEEEEEC---CC-----eEEcCEEEEcCCccHH
Confidence 99887 99999999999987777666544 44 5899999999999884
No 43
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.44 E-value=6.1e-11 Score=121.29 Aligned_cols=74 Identities=15% Similarity=0.054 Sum_probs=56.5
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~v 229 (455)
..++...+...|.+.+.+.|+ +++.+++|+++..+++.+.|.+....+|. ..++.+|.|
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv-------------------~i~~~~~V~~l~~~~~~~~V~~~d~~~G~--~~~i~A~~V 202 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGG-------------------EVLTRTRATSARRENGLWIVEAEDIDTGK--KYSWQARGL 202 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEETTEEEEEEEETTTCC--EEEEEESCE
T ss_pred CEEcHHHHHHHHHHHHHHcCC-------------------EEEcCcEEEEEEEeCCEEEEEEEECCCCC--EEEEECCEE
Confidence 346788899999999999887 99999999999987765556654212332 346899999
Q ss_pred EeecCCCch-hhhh-cC
Q 012845 230 IGTDGAGST-VRKL-VG 244 (455)
Q Consensus 230 V~AdG~~S~-vr~~-l~ 244 (455)
|.|+|.+|. +++. ++
T Consensus 203 V~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 203 VNATGPWVKQFFDDGMH 219 (501)
T ss_dssp EECCGGGHHHHHHHHTC
T ss_pred EECCChhHHHHHHHhcc
Confidence 999999996 5554 54
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.44 E-value=1.8e-12 Score=137.49 Aligned_cols=69 Identities=10% Similarity=0.176 Sum_probs=55.7
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~v 229 (455)
..++...+...|.+.+++.|+ +|+++++|+++..+++++.|.+. +|. ++.+|.|
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~----~i~Ad~V 465 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGL-------------------QIYYQYQLQNFSRKDDCWLLNFA---GDQ----QATHSVV 465 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEET---TSC----EEEESEE
T ss_pred eeeCHHHHHHHHHHHHHhCCC-------------------EEEeCCeeeEEEEeCCeEEEEEC---CCC----EEECCEE
Confidence 446678899999999999887 99999999999988888766654 544 6899999
Q ss_pred EeecCCCch-hhhhcC
Q 012845 230 IGTDGAGST-VRKLVG 244 (455)
Q Consensus 230 V~AdG~~S~-vr~~l~ 244 (455)
|.|+|.+|. +.+..+
T Consensus 466 VlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 466 VLANGHQISRFSQTST 481 (676)
T ss_dssp EECCGGGGGCSTTTTT
T ss_pred EECCCcchhccccccC
Confidence 999999986 444333
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.43 E-value=2.3e-12 Score=136.89 Aligned_cols=69 Identities=10% Similarity=0.064 Sum_probs=54.1
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~v 229 (455)
..++...+.+.|.+.+.+.|+ +|+++++|+++..+++++.|.+. +|. .++.+|.|
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~---~~i~Ad~V 461 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGM-------------------TCHYQHELQRLKRIDSQWQLTFG---QSQ---AAKHHATV 461 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEECSSSEEEEEC----CC---CCEEESEE
T ss_pred eEECHHHHHHHHHHHHHhCCC-------------------EEEeCCeEeEEEEeCCeEEEEeC---CCc---EEEECCEE
Confidence 345678899999999999887 99999999999998888776654 442 14789999
Q ss_pred EeecCCCch-hhhhc
Q 012845 230 IGTDGAGST-VRKLV 243 (455)
Q Consensus 230 V~AdG~~S~-vr~~l 243 (455)
|.|+|.+|. +...+
T Consensus 462 VlAtG~~s~~l~~~~ 476 (689)
T 3pvc_A 462 ILATGHRLPEWEQTH 476 (689)
T ss_dssp EECCGGGTTCSTTTT
T ss_pred EECCCcchhcccccc
Confidence 999999985 33333
No 46
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.40 E-value=1.1e-10 Score=120.70 Aligned_cols=75 Identities=15% Similarity=0.037 Sum_probs=58.4
Q ss_pred ccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEE
Q 012845 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 151 ~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~v 229 (455)
.++...|...|.+.+.+.|+ +|+.+++|+++..+++.+. |.+....+| ...++.+|.|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~-------------------~i~~~~~V~~l~~~~g~v~gV~~~d~~tg--~~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGA-------------------VALNYMKVESFIYDQGKVVGVVAKDRLTD--TTHTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEEETTEEEEEEEEETTTC--CEEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEEEcCCeEEEEEEEEcCCC--ceEEEECCEE
Confidence 56778899999999999887 9999999999998877643 655522223 2347899999
Q ss_pred EeecCCCc-hhhhhcCCC
Q 012845 230 IGTDGAGS-TVRKLVGID 246 (455)
Q Consensus 230 V~AdG~~S-~vr~~l~~~ 246 (455)
|.|+|.+| .+++.++..
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999999 477777643
No 47
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=3.5e-12 Score=126.63 Aligned_cols=142 Identities=18% Similarity=0.239 Sum_probs=88.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC----ccc------ccChh---------HHHHHHhhh--
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAH------FINNR---------YALVFRKLD-- 99 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~----~~~------~l~~~---------~~~~l~~~~-- 99 (455)
|.++||+|||||++|+++|+.|+++|.+|+||||.+.+..+. .+. ...+. ....+..+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 457999999999999999999999999999999987652110 000 00000 001111110
Q ss_pred chHHHHHhcCCCcccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcc
Q 012845 100 GLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTE 179 (455)
Q Consensus 100 gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~ 179 (455)
.+.+.+...+.+.. ....+ ..+ + .. ....+.+.|.+.+++.|+
T Consensus 82 ~~~~~~~~~Gi~~~--------~~~~g---------------~~~-p---~~-~~~~l~~~L~~~~~~~Gv--------- 124 (401)
T 2gqf_A 82 DFISLVAEQGITYH--------EKELG---------------QLF-C---DE-GAEQIVEMLKSECDKYGA--------- 124 (401)
T ss_dssp HHHHHHHHTTCCEE--------ECSTT---------------EEE-E---TT-CTHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHhCCCceE--------ECcCC---------------EEc-c---CC-CHHHHHHHHHHHHHHCCC---------
Confidence 01111111111110 00000 000 0 01 567888899999999887
Q ss_pred cccccccccceEEeccEEEEeeec----CCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 180 GLHNHLLQGREILMGHECVSVSAT----DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 180 ~~~~~~~~~~~i~~~~~v~~i~~~----~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+++++++|+++..+ ++.+.|.+. ++ ++++|.||.|+|.+|
T Consensus 125 ----------~i~~~~~v~~i~~~~~g~~~~~~v~~~---~g-----~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 125 ----------KILLRSEVSQVERIQNDEKVRFVLQVN---ST-----QWQCKNLIVATGGLS 168 (401)
T ss_dssp ----------EEECSCCEEEEEECCSCSSCCEEEEET---TE-----EEEESEEEECCCCSS
T ss_pred ----------EEEeCCEEEEEEcccCcCCCeEEEEEC---CC-----EEECCEEEECCCCcc
Confidence 99999999999876 555655443 33 689999999999999
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.39 E-value=1.2e-12 Score=131.68 Aligned_cols=63 Identities=10% Similarity=0.165 Sum_probs=53.3
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEecc---EEEEeeecCCceE-EEEEeccCCcceeEEEE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH---ECVSVSATDQCIN-VIASFLKEGKCTERNIQ 225 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~---~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~ 225 (455)
..++...+...|.+.+++.|+ +|++++ +|+++..+++.+. |.+. +|. ++.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv-------------------~i~~~t~~~~V~~i~~~~~~v~gV~t~---~G~----~i~ 209 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGV-------------------KFVTGTPQGRVVTLIFENNDVKGAVTA---DGK----IWR 209 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEESTTTTCEEEEEEETTEEEEEEET---TTE----EEE
T ss_pred EEecHHHHHHHHHHHHHhcCC-------------------EEEeCCcCceEEEEEecCCeEEEEEEC---CCC----EEE
Confidence 455667899999999999887 999999 9999998877776 6655 664 789
Q ss_pred eCEEEeecCCCch
Q 012845 226 CNILIGTDGAGST 238 (455)
Q Consensus 226 ~d~vV~AdG~~S~ 238 (455)
+|.||.|+|.+|.
T Consensus 210 Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 210 AERTFLCAGASAG 222 (438)
T ss_dssp CSEEEECCGGGGG
T ss_pred CCEEEECCCCChh
Confidence 9999999999985
No 49
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.37 E-value=4e-12 Score=130.34 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=53.4
Q ss_pred chhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEe
Q 012845 153 SQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIG 231 (455)
Q Consensus 153 ~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~ 231 (455)
....+.+.|.+.+++.|+ +|+++++|+++..+++.+. |.+. +|+ ++.+|+||.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv-------------------~I~~~t~V~~I~~~~~~v~gV~l~---~G~----~i~Ad~VVl 271 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGG-------------------EIRFSTRVDDLHMEDGQITGVTLS---NGE----EIKSRHVVL 271 (549)
T ss_dssp HHHHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEESSSBEEEEEET---TSC----EEECSCEEE
T ss_pred hHHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEEEeCCEEEEEEEC---CCC----EEECCEEEE
Confidence 456788889999998887 9999999999998777654 5554 664 789999999
Q ss_pred ecCCCch----hhhhcCCC
Q 012845 232 TDGAGST----VRKLVGID 246 (455)
Q Consensus 232 AdG~~S~----vr~~l~~~ 246 (455)
|+|.+|. ..+.+|..
T Consensus 272 A~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 272 AVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp CCCTTCHHHHHHHHHTTCC
T ss_pred CCCCChhhHHHHHHHcCCC
Confidence 9999994 33444544
No 50
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.34 E-value=6.4e-11 Score=119.86 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=45.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCCCCCCCCcc---------------cccChhHHHHHHhhhc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNKAFSTHPQA---------------HFINNRYALVFRKLDG 100 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g------~~V~l~Er~~~~~~~~~~---------------~~l~~~~~~~l~~~~g 100 (455)
+.+||+|||||++||++|+.|+++| ++|+|||+.+.+..+... ....+...++++++ |
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~l-g 82 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDL-G 82 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHT-T
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHc-C
Confidence 3589999999999999999999999 999999998766422111 11235566777777 6
Q ss_pred hHHH
Q 012845 101 LAEE 104 (455)
Q Consensus 101 l~~~ 104 (455)
+.+.
T Consensus 83 l~~~ 86 (470)
T 3i6d_A 83 LEHL 86 (470)
T ss_dssp CCTT
T ss_pred Ccce
Confidence 6543
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.33 E-value=1.1e-11 Score=117.09 Aligned_cols=143 Identities=13% Similarity=0.215 Sum_probs=90.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCC--Cccccc-----ChhHHHHHHhhhchHHHHHhcCCCcc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTH--PQAHFI-----NNRYALVFRKLDGLAEEIERSQPPVD 113 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~~~~~~--~~~~~l-----~~~~~~~l~~~~gl~~~l~~~~~~~~ 113 (455)
.++||+|||||++|+++|+.|+++ |.+|+|+||.+.+... .++..+ .....++++++ |+ +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-G~---------~~~ 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-GV---------AYD 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-TC---------CCE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-CC---------Ccc
Confidence 468999999999999999999997 9999999998765321 111111 11122222222 21 110
Q ss_pred cccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHh-cccccccCCCcccccccccccceEE
Q 012845 114 LWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREIL 192 (455)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~ 192 (455)
. .+ ..........+...|.+.+.+ .|+ +++
T Consensus 108 ~----------~~--------------------~~~~~~~~~~~~~~l~~~~~~~~gv-------------------~i~ 138 (284)
T 1rp0_A 108 E----------QD--------------------TYVVVKHAALFTSTIMSKLLARPNV-------------------KLF 138 (284)
T ss_dssp E----------CS--------------------SEEEESCHHHHHHHHHHHHHTSTTE-------------------EEE
T ss_pred c----------CC--------------------CEEEecCHHHHHHHHHHHHHhcCCC-------------------EEE
Confidence 0 00 000112456777888888766 565 999
Q ss_pred eccEEEEeeecCCceE-EEEEec----c--CC-cceeEEEEeCEEEeecCCCchhhhhc
Q 012845 193 MGHECVSVSATDQCIN-VIASFL----K--EG-KCTERNIQCNILIGTDGAGSTVRKLV 243 (455)
Q Consensus 193 ~~~~v~~i~~~~~~~~-v~~~~~----~--~g-~~~~~~~~~d~vV~AdG~~S~vr~~l 243 (455)
++++|+++..+++.+. +.+... + ++ .+...++.+|.||.|+|.+|.++...
T Consensus 139 ~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 139 NAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp ETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 9999999988766543 333310 0 11 11224789999999999999887654
No 52
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.33 E-value=3.3e-12 Score=127.18 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=94.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCC--ccc-cc-ChhH------HHHHHhhhchHHHHHhc-
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHP--QAH-FI-NNRY------ALVFRKLDGLAEEIERS- 108 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~~~~~--~~~-~l-~~~~------~~~l~~~~gl~~~l~~~- 108 (455)
..+||+|||||++|+++|+.|+++ |++|+|||+........ .+. .+ .+.. ......+ .++.+....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~ 113 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTR-EQLLGALGSG 113 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHH-HHHHTGGGSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHH-HHHHHHhCCC
Confidence 468999999999999999999999 99999999986543221 111 23 2211 1111112 222220000
Q ss_pred -CCCcccccceEEeec--CCCCccccccCCC-----------ccccccccCCccccccchhhHHHHHHHHHHhccccccc
Q 012845 109 -QPPVDLWRKFIYCTS--VTGPILGSVDHMQ-----------PQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICT 174 (455)
Q Consensus 109 -~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~ 174 (455)
............... ..| .+...+... ........ ......++...+...|.+.+.+.|+
T Consensus 114 ~~~~~~~~g~l~~~~~~~~~g-~l~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~g~v~~~~l~~~L~~~~~~~Gv---- 187 (405)
T 3c4n_A 114 KTLEVEDRPLLHLLPAGEGSG-LTPTLDALADFPEALALLDPARLPVARV-DPRALTYRPGSLALLAAQQAIGQGA---- 187 (405)
T ss_dssp CCCCEEECCEEEEESSCCSSS-CEEHHHHTTTCHHHHTTSCTTTSCEEEE-ETTCEEECHHHHHHHHHHHHHTTTC----
T ss_pred CCCcEEeeCeEEehhhHhHCC-CCCHHHHHHhCCCccccccCCcceEEEE-cCCCEEEcHHHHHHHHHHHHHHCCC----
Confidence 000000000000000 001 000000000 00000000 1113456778899999999999887
Q ss_pred CCCcccccccccccceEEeccEEE---------EeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc-hhhh-hc
Q 012845 175 SEGTEGLHNHLLQGREILMGHECV---------SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS-TVRK-LV 243 (455)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~~~~v~---------~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S-~vr~-~l 243 (455)
+++++++|+ ++..+++.+.|.+. ++ ++.+|.||.|+|.+| .+++ .+
T Consensus 188 ---------------~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~---~g-----~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 188 ---------------GLLLNTRAELVPGGVRLHRLTVTNTHQIVVHE---TR-----QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp ---------------EEECSCEEEEETTEEEEECBCC-------CBC---CE-----EEEEEEEEECCGGGHHHHHHHHH
T ss_pred ---------------EEEcCCEEEeccccccccceEeeCCeEEEEEC---Cc-----EEECCEEEECCCccHHHHHHHhc
Confidence 899999999 88876666544322 33 689999999999999 5777 77
Q ss_pred CCC
Q 012845 244 GID 246 (455)
Q Consensus 244 ~~~ 246 (455)
+..
T Consensus 245 g~~ 247 (405)
T 3c4n_A 245 GLH 247 (405)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 53
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.31 E-value=1.3e-10 Score=117.14 Aligned_cols=70 Identities=19% Similarity=0.279 Sum_probs=53.9
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee---------------cCCce-EEEEEe
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA---------------TDQCI-NVIASF 213 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~---------------~~~~~-~v~~~~ 213 (455)
..++...+.+.|.+.+.+.|+ +|+.+++|+++.. +++.+ .|.+.
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv-------------------~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~- 235 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGV-------------------EFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLS- 235 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEET-
T ss_pred eEEcHHHHHHHHHHHHHhCCC-------------------EEEcCCeEEEEEecccccccccccccccCCCceEEEEeC-
Confidence 446677899999999999887 9999999999987 44443 24433
Q ss_pred ccCCcceeEEE--EeCEEEeecCCCch-hhhhcCCC
Q 012845 214 LKEGKCTERNI--QCNILIGTDGAGST-VRKLVGID 246 (455)
Q Consensus 214 ~~~g~~~~~~~--~~d~vV~AdG~~S~-vr~~l~~~ 246 (455)
+| ++ .+|.||.|+|.+|. +.+.++..
T Consensus 236 --~g-----~i~~~Ad~VV~AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 236 --DG-----TRVEVGEKLVVAAGVWSNRLLNPLGID 264 (448)
T ss_dssp --TS-----CEEEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred --CC-----EEeecCCEEEECCCcCHHHHHHHcCCC
Confidence 44 56 89999999999987 67776643
No 54
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.31 E-value=2.6e-11 Score=116.22 Aligned_cols=143 Identities=17% Similarity=0.284 Sum_probs=89.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCc-------ccccChhHHHHHHhhhchHHHHHhcCCCc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQ-------AHFINNRYALVFRKLDGLAEEIERSQPPV 112 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~~~~~~-------~~~l~~~~~~~l~~~~gl~~~l~~~~~~~ 112 (455)
..+||+|||||++|+++|+.|+++ |++|+|||+.+.+..... ...+.+....+|+.+ |+ +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEV-GV---------PY 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHH-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHc-CC---------cc
Confidence 468999999999999999999997 999999999876531110 011112233333333 22 11
Q ss_pred ccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceE
Q 012845 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (455)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i 191 (455)
.. .+.. ........+.+.|.+.+.+. |+ ++
T Consensus 148 ~~----------~G~~--------------------~~~~~~~d~~~~L~~~a~~~~gV-------------------~i 178 (344)
T 3jsk_A 148 ED----------EGDY--------------------VVVKHAALFTSTVLSKVLQRPNV-------------------KL 178 (344)
T ss_dssp EE----------CSSE--------------------EEESCHHHHHHHHHHHHHTCTTE-------------------EE
T ss_pred cc----------cCCe--------------------EEEecHHHHHHHHHHHHHhCCCC-------------------EE
Confidence 00 0000 01112456778888888874 65 99
Q ss_pred EeccEEEEeeecCC-------------------ceE-EEEEec---cCCcc----eeEEEEeCEEEeecCCCchhhhhc
Q 012845 192 LMGHECVSVSATDQ-------------------CIN-VIASFL---KEGKC----TERNIQCNILIGTDGAGSTVRKLV 243 (455)
Q Consensus 192 ~~~~~v~~i~~~~~-------------------~~~-v~~~~~---~~g~~----~~~~~~~d~vV~AdG~~S~vr~~l 243 (455)
+++++|+++..+++ .+. |.+.+. .++.. ...++.+++||+|||..|++++.+
T Consensus 179 ~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 179 FNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred EeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 99999999987652 222 222211 12211 234889999999999999976554
No 55
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.30 E-value=3.7e-11 Score=120.11 Aligned_cols=36 Identities=33% Similarity=0.504 Sum_probs=33.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+||+|||||++||++|+.|+++|++|+|||+++.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~G 36 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIG 36 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 389999999999999999999999999999987764
No 56
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.30 E-value=1.7e-11 Score=118.52 Aligned_cols=126 Identities=21% Similarity=0.283 Sum_probs=87.8
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
|+.++||+|||||++|+++|+.|++.|++|+|||+.+... |.+... .+...
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~~----- 52 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--------------------GQLTAL----YPEKY----- 52 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--------------------HHHHHT----CTTSE-----
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Ceeecc----CCCce-----
Confidence 3457899999999999999999999999999999986542 111000 01000
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
+.... . ...+.+..+.+.|.+.+.+.++ .++++++|+.
T Consensus 53 ---------~~~~~------------~--~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~ 90 (335)
T 2zbw_A 53 ---------IYDVA------------G--FPKVYAKDLVKGLVEQVAPFNP-------------------VYSLGERAET 90 (335)
T ss_dssp ---------ECCST------------T--CSSEEHHHHHHHHHHHHGGGCC-------------------EEEESCCEEE
T ss_pred ---------eeccC------------C--CCCCCHHHHHHHHHHHHHHcCC-------------------EEEeCCEEEE
Confidence 00000 0 0123456788888888888776 8889999999
Q ss_pred eeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhc
Q 012845 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV 243 (455)
Q Consensus 200 i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l 243 (455)
++.+++.+.+.+. ++. ++.+|.||.|+|..|...+..
T Consensus 91 i~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 91 LEREGDLFKVTTS---QGN----AYTAKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEEETTEEEEEET---TSC----EEEEEEEEECCTTSEEEECCC
T ss_pred EEECCCEEEEEEC---CCC----EEEeCEEEECCCCCCCCCCCC
Confidence 9887766666654 554 689999999999987554444
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=2.1e-11 Score=118.56 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=88.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
.++||+|||||++|+++|+.|+++|++|+|||+.+.+. +.+.. .+|.+. ...+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g----g~~~~--------~~~~~~-----~~~~~--------- 55 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG----GAWQH--------AWHSLH-----LFSPA--------- 55 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS----GGGGG--------SCTTCB-----CSSCG---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC----CcccC--------CCCCcE-----ecCch---------
Confidence 45899999999999999999999999999999987652 11000 011100 00000
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
........... ........+..+.+.|.+.+++.|+ +++++++|++++
T Consensus 56 ------~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i~ 103 (357)
T 4a9w_A 56 ------GWSSIPGWPMP-------ASQGPYPARAEVLAYLAQYEQKYAL-------------------PVLRPIRVQRVS 103 (357)
T ss_dssp ------GGSCCSSSCCC-------CCSSSSCBHHHHHHHHHHHHHHTTC-------------------CEECSCCEEEEE
T ss_pred ------hhhhCCCCCCC-------CCccCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEE
Confidence 00000000000 1112234678899999999999887 899999999999
Q ss_pred ecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+++.+. |.+. ++ ++.+|.||.|+|.+|.
T Consensus 104 ~~~~~~~~v~~~---~g-----~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 104 HFGERLRVVARD---GR-----QWLARAVISATGTWGE 133 (357)
T ss_dssp EETTEEEEEETT---SC-----EEEEEEEEECCCSGGG
T ss_pred ECCCcEEEEEeC---CC-----EEEeCEEEECCCCCCC
Confidence 8888776 6543 44 6899999999998773
No 58
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.27 E-value=5.8e-11 Score=123.27 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=94.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--cccccChhHHHHHHhhhch-----------------
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGL----------------- 101 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~--~~~~l~~~~~~~l~~~~gl----------------- 101 (455)
..++||+|||||++|+++|+.|+++|.+|+||||.+.+.... .+.++........+.+ |+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH-GVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999998764211 1111211111111111 11
Q ss_pred -----------------HHHHHhcCCCcccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHH
Q 012845 102 -----------------AEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (455)
Q Consensus 102 -----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~ 164 (455)
.+.+.+.+.+... . ....+.. +.....+ ....++...+.+.|.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~---~---~~~~g~~-----------~~r~~~~-~~~~~~~~~l~~~L~~~ 259 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD---L---KRSGGAR-----------VDRTHRP-HGGKSSGPEIIDTLRKA 259 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE---E---ECCTTCS-----------SCCEEEC-SSSSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc---c---cccCCCC-----------CCceeec-CCCCCCHHHHHHHHHHH
Confidence 1111111111100 0 0000000 0000000 01124467899999999
Q ss_pred HHhcccccccCCCcccccccccccceEEeccEEEEeeecC-CceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhh
Q 012845 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (455)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~ 242 (455)
+.+.|+ +|+++++|+++..++ +.+. |.+.. .+| ...++.+|.||.|+|.+|..++.
T Consensus 260 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g--~~~~i~A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 260 AKEQGI-------------------DTRLNSRVVKLVVNDDHSVVGAVVHG-KHT--GYYMIGAKSVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHTTC-------------------CEECSEEEEEEEECTTSBEEEEEEEE-TTT--EEEEEEEEEEEECCCCCTTCHHH
T ss_pred HHhcCC-------------------EEEeCCEEEEEEECCCCcEEEEEEEe-CCC--cEEEEEcCEEEEecCCcccCHHH
Confidence 999887 999999999998876 5543 44441 133 23468999999999999976443
No 59
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.27 E-value=1.7e-11 Score=112.29 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=86.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
+++||+|||||++|+.+|+.|++.|.+|+|+|+..... +..+.+. ++++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~----G~~~~~~-------~~~~~------------------- 51 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV----MMPFLPP-------KPPFP------------------- 51 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT----TCCSSCC-------CSCCC-------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC----CcccCcc-------ccccc-------------------
Confidence 46899999999999999999999999999999974211 0111110 00000
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceEEeccEEEEe
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+.....++ + . ..+ ++..+.+.|.+.+++. |+ +++ +++|+++
T Consensus 52 ---~~~~~~~~~---d-~----~g~------~~~~~~~~l~~~~~~~~gv-------------------~i~-~~~v~~i 94 (232)
T 2cul_A 52 ---PGSLLERAY---D-P----KDE------RVWAFHARAKYLLEGLRPL-------------------HLF-QATATGL 94 (232)
T ss_dssp ---TTCHHHHHC---C-T----TCC------CHHHHHHHHHHHHHTCTTE-------------------EEE-ECCEEEE
T ss_pred ---hhhHHhhhc---c-C----CCC------CHHHHHHHHHHHHHcCCCc-------------------EEE-EeEEEEE
Confidence 000000000 0 0 001 5778999999999886 65 777 6799999
Q ss_pred eecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcCC
Q 012845 201 SATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGI 245 (455)
Q Consensus 201 ~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~~ 245 (455)
..+++.+. +.+. +|. ++.+|.||.|+|.+|..+..+|.
T Consensus 95 ~~~~~~v~~v~~~---~g~----~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 95 LLEGNRVVGVRTW---EGP----PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp EEETTEEEEEEET---TSC----CEECSEEEECCTTCSSCEEEETT
T ss_pred EEeCCEEEEEEEC---CCC----EEECCEEEECCCCChhhceecCC
Confidence 88766643 4443 554 68999999999999987776653
No 60
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.25 E-value=4e-10 Score=110.25 Aligned_cols=39 Identities=21% Similarity=0.449 Sum_probs=35.2
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
|.+++||+|||||++|+++|+.|+++|++|+|+||....
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 456789999999999999999999999999999998643
No 61
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.25 E-value=1.8e-10 Score=119.71 Aligned_cols=159 Identities=15% Similarity=0.172 Sum_probs=92.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--cccccChhHHHHHHhhhch-----------------
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGL----------------- 101 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~--~~~~l~~~~~~~l~~~~gl----------------- 101 (455)
..++||+|||||++|+++|+.|+++|.+|+||||.+...... .+.++........+++ |+
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAK-KITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 447899999999999999999999999999999998764211 1111110000111111 11
Q ss_pred -----------------HHHHHhcCCCcccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHH
Q 012845 102 -----------------AEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (455)
Q Consensus 102 -----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~ 164 (455)
.+.+.+.+.+.. .. ....+.. +.....+. ........+.+.|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~---~~---~~~~g~~-----------~~r~~~~~-~g~~~g~~l~~~L~~~ 264 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLT---DV---GMMGGAS-----------VNRAHRPT-GGAGVGAHVVQVLYDN 264 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCC---EE---ECCTTCS-----------SCCEEEST-TTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCc---cC---cccCCcC-----------CCeeEecC-CCCCCHHHHHHHHHHH
Confidence 011111111110 00 0000000 00000000 0113456789999999
Q ss_pred HHhcccccccCCCcccccccccccceEEeccEEEEeeecC-CceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhh
Q 012845 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (455)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr 240 (455)
+++.|+ +|+++++|+++..++ +.+. |.+.. .+| ...++.+|.||.|+|.+|..+
T Consensus 265 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g--~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 265 AVKRNI-------------------DLRMNTRGIEVLKDDKGTVKGILVKG-MYK--GYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp HHHTTC-------------------EEESSEEEEEEEECTTSCEEEEEEEE-TTT--EEEEEECSEEEECCCCCTTCH
T ss_pred HHhcCC-------------------EEEeCCEeeEeEEcCCCeEEEEEEEe-CCC--cEEEEECCeEEEeCCCcccCH
Confidence 999887 999999999998866 5443 44441 123 234789999999999988643
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.25 E-value=3.3e-11 Score=117.82 Aligned_cols=125 Identities=16% Similarity=0.296 Sum_probs=87.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+|||||++|+++|+.|++.|++|+|||+.+.+. |.+..+ .+...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~~------ 61 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--------------------GQLAAL----YPEKH------ 61 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHT----CTTSE------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--------------------Cccccc----CCCcc------
Confidence 456899999999999999999999999999999986542 111000 01000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.... + ....+.+..+.+.|.+.+.+.++ .++++++|+.+
T Consensus 62 --------~~~~-------------~-~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 100 (360)
T 3ab1_A 62 --------IYDV-------------A-GFPEVPAIDLVESLWAQAERYNP-------------------DVVLNETVTKY 100 (360)
T ss_dssp --------ECCS-------------T-TCSSEEHHHHHHHHHHHHHTTCC-------------------EEECSCCEEEE
T ss_pred --------cccC-------------C-CCCCCCHHHHHHHHHHHHHHhCC-------------------EEEcCCEEEEE
Confidence 0000 0 00124567788888888888776 88999999999
Q ss_pred eecCC-ceEEEEEeccCCcceeEEEEeCEEEeecCCCchhhhhc
Q 012845 201 SATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV 243 (455)
Q Consensus 201 ~~~~~-~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l 243 (455)
+..++ .+.+.+. +|. .+.+|.||.|+|..|...+.+
T Consensus 101 ~~~~~~~~~v~~~---~g~----~~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 101 TKLDDGTFETRTN---TGN----VYRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EECTTSCEEEEET---TSC----EEEEEEEEECCTTCSCCBCCC
T ss_pred EECCCceEEEEEC---CCc----EEEeeEEEEccCCCcCCCCCC
Confidence 88655 5666654 554 789999999999987555443
No 63
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.25 E-value=4e-11 Score=116.43 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=32.7
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|+.|++ .|++|+||||.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 489999999999999999999 99999999998654
No 64
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.24 E-value=6.8e-11 Score=122.32 Aligned_cols=153 Identities=15% Similarity=0.192 Sum_probs=92.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC-CCCCCCcccc---cCh-hHHHHHHhhhchHHHHHhcCCCccccc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQAHF---INN-RYALVFRKLDGLAEEIERSQPPVDLWR 116 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~-~~~~~~~~~~---l~~-~~~~~l~~~~gl~~~l~~~~~~~~~~~ 116 (455)
.++||+|||||+||+.+|+.|++.|.+|+|+|++. .....+|... +.. ...+.++.+.+......+.. ..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~-----gi 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQA-----GI 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHH-----EE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhc-----cc
Confidence 46999999999999999999999999999999974 2332222211 111 12222333322222111100 00
Q ss_pred ceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHh-cccccccCCCcccccccccccceEEecc
Q 012845 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGH 195 (455)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 195 (455)
.+.......+... ......+++..+.+.|.+.+++ .|+ +| +++
T Consensus 102 ~f~~l~~~kgpav----------------~~~r~~~Dr~~~~~~L~e~Le~~~GV-------------------~I-~~~ 145 (651)
T 3ces_A 102 QFRILNASKGPAV----------------RATRAQADRVLYRQAVRTALENQPNL-------------------MI-FQQ 145 (651)
T ss_dssp EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EEC
T ss_pred chhhhhcccCccc----------------ccchhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EEE
Confidence 0110000000000 0011356788899999999987 565 77 678
Q ss_pred EEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhh
Q 012845 196 ECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (455)
Q Consensus 196 ~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~ 242 (455)
+|+.+..+++.+. |.+. +|. .+.+|.||.|+|.+|..+..
T Consensus 146 ~V~~L~~e~g~V~GV~t~---dG~----~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 146 AVEDLIVENDRVVGAVTQ---MGL----KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp CEEEEEESSSBEEEEEET---TSE----EEEEEEEEECCSTTTCCEEE
T ss_pred EEEEEEecCCEEEEEEEC---CCC----EEECCEEEEcCCCCccCccc
Confidence 9999987766653 4443 553 78999999999998865544
No 65
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.23 E-value=1.1e-10 Score=120.24 Aligned_cols=153 Identities=15% Similarity=0.154 Sum_probs=93.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC-CCCCCCccc---ccC-hhHHHHHHhhhchHHHHHhcCCCccccc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQAH---FIN-NRYALVFRKLDGLAEEIERSQPPVDLWR 116 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~-~~~~~~~~~---~l~-~~~~~~l~~~~gl~~~l~~~~~~~~~~~ 116 (455)
.++||+|||||+||+.+|+.|++.|.+|+|+|++. .....+|.. ++. ....+.++.+++.+....+.. ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~-----gi 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQT-----GI 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHH-----EE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhc-----cc
Confidence 46999999999999999999999999999999984 232222211 111 122233333433332221110 00
Q ss_pred ceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHh-cccccccCCCcccccccccccceEEecc
Q 012845 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGH 195 (455)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 195 (455)
.+.......+... ......+++..+.+.|.+.+++ .|+ +| +++
T Consensus 101 ~f~~l~~~kGpav----------------~~~r~~~Dr~~~~~~L~~~Le~~~GV-------------------eI-~~~ 144 (637)
T 2zxi_A 101 QFKMLNTRKGKAV----------------QSPRAQADKKRYREYMKKVCENQENL-------------------YI-KQE 144 (637)
T ss_dssp EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EES
T ss_pred ceeecccccCccc----------------cchhhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EEe
Confidence 0110000000000 0011346788899999999987 465 77 578
Q ss_pred EEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhh
Q 012845 196 ECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (455)
Q Consensus 196 ~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~ 242 (455)
+|+++..+++.+. |.+. +|. .+.+|.||.|+|.++..+..
T Consensus 145 ~Vt~L~~e~g~V~GV~t~---dG~----~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 145 EVVDIIVKNNQVVGVRTN---LGV----EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp CEEEEEESSSBEEEEEET---TSC----EEECSEEEECCTTCBTCEEE
T ss_pred EEEEEEecCCEEEEEEEC---CCc----EEEeCEEEEccCCCccCcee
Confidence 9999988777654 5444 564 78999999999998765543
No 66
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.21 E-value=1.6e-10 Score=119.55 Aligned_cols=151 Identities=18% Similarity=0.249 Sum_probs=91.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC-CCCCCCcccccC----hhHHHHHHhhhchHHHHHh-cCCCccc
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQAHFIN----NRYALVFRKLDGLAEEIER-SQPPVDL 114 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~-~~~~~~~~~~l~----~~~~~~l~~~~gl~~~l~~-~~~~~~~ 114 (455)
..++||+|||||+||+.+|+.|++.|.+|+|+|+.. ......|...+. ...++.+..++++...... .+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~g----- 93 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATG----- 93 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHE-----
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcC-----
Confidence 346999999999999999999999999999999985 232222221111 1122223333333222111 11
Q ss_pred ccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceEEe
Q 012845 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILM 193 (455)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~ 193 (455)
..+.......+..+ ......+++..+...|.+.+++. |+ ++ +
T Consensus 94 -i~f~~l~~~kgpav----------------~~~r~~~Dr~~l~~~L~~~l~~~~GV-------------------~I-~ 136 (641)
T 3cp8_A 94 -IQFRMLNRSKGPAM----------------HSPRAQADKTQYSLYMRRIVEHEPNI-------------------DL-L 136 (641)
T ss_dssp -EEEEEECSSSCTTT----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-E
T ss_pred -CchhhcccccCccc----------------cchhhhcCHHHHHHHHHHHHHhCCCC-------------------EE-E
Confidence 01111000000000 00123568888999999998874 65 77 4
Q ss_pred ccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhh
Q 012845 194 GHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (455)
Q Consensus 194 ~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr 240 (455)
+.+|+.+..+++.+. |.+. +|. ++.+|.||.|+|.++...
T Consensus 137 ~~~V~~L~~d~g~V~GV~t~---~G~----~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 137 QDTVIGVSANSGKFSSVTVR---SGR----AIQAKAAILACGTFLNGL 177 (641)
T ss_dssp ECCEEEEEEETTEEEEEEET---TSC----EEEEEEEEECCTTCBTCE
T ss_pred eeEEEEEEecCCEEEEEEEC---CCc----EEEeCEEEECcCCCCCcc
Confidence 568999887777665 5544 554 789999999999987643
No 67
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.21 E-value=4.7e-10 Score=112.08 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+||+|||||++||++|+.|+++|++|+|||+++.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~G 36 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITG 36 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCC
Confidence 489999999999999999999999999999998764
No 68
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.20 E-value=9.5e-11 Score=118.12 Aligned_cols=167 Identities=13% Similarity=0.121 Sum_probs=90.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcc-----
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVD----- 113 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~----- 113 (455)
+..+||+||||||+|+++|..|++.|+ +|+||||.+.+.. .+.........+ .+|...+.+. ..+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG---~~~~~~~~~~~~-~ip~~~~~~~--~~~~~~g~~~ 77 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG---VWNYTSTLSNKL-PVPSTNPILT--TEPIVGPAAL 77 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSST---TCSCCSCCCSCC-CSSBCCTTCC--CCCBCCSSSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCC---eecCCCCCCccc-cccccccccc--cccccccccc
Confidence 346899999999999999999999999 9999999865521 000000000000 0000000000 00000
Q ss_pred -cccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEE
Q 012845 114 -LWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREIL 192 (455)
Q Consensus 114 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~ 192 (455)
.|....+ ..................+ .........+..+.++|.+.+.+.+. .++
T Consensus 78 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~-------------------~i~ 133 (447)
T 2gv8_A 78 PVYPSPLY-RDLQTNTPIELMGYCDQSF----KPQTLQFPHRHTIQEYQRIYAQPLLP-------------------FIK 133 (447)
T ss_dssp CBCCCCCC-TTCBCSSCHHHHSCTTCCC----CTTCCSSCBHHHHHHHHHHHHGGGGG-------------------GEE
T ss_pred CCccCchh-hhhccCCCHHHhccCCCCC----CCCCCCCCCHHHHHHHHHHHHHHhhC-------------------eEE
Confidence 0000000 0000000000000000000 00012335688899999999888764 788
Q ss_pred eccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 193 MGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 193 ~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
++++|++++..++.+.|++....+|.. ..++.+|.||.|+|.+|.
T Consensus 134 ~~t~V~~v~~~~~~~~V~~~~~~~G~~-~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 134 LATDVLDIEKKDGSWVVTYKGTKAGSP-ISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp CSEEEEEEEEETTEEEEEEEESSTTCC-EEEEEESEEEECCCSSSS
T ss_pred eCCEEEEEEeCCCeEEEEEeecCCCCe-eEEEEeCEEEECCCCCCC
Confidence 999999999888878887762111320 236899999999999874
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.19 E-value=7.5e-11 Score=113.83 Aligned_cols=123 Identities=18% Similarity=0.235 Sum_probs=84.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
.+.+||+|||||++|+++|+.|+++|++|+|||+.+.......+.... . . .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~---------~-~----------------~--- 70 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT---------T-T----------------E--- 70 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG---------S-S----------------E---
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc---------c-h----------------h---
Confidence 457899999999999999999999999999999976222111111000 0 0 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.... +.....+....+...|.+.+.+.|+ .++.++ |+++
T Consensus 71 --------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~gv-------------------~i~~~~-v~~i 109 (338)
T 3itj_A 71 --------IENF-------------PGFPDGLTGSELMDRMREQSTKFGT-------------------EIITET-VSKV 109 (338)
T ss_dssp --------ECCS-------------TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECSC-EEEE
T ss_pred --------hccc-------------CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEEeE-EEEE
Confidence 0000 0000124567888999999999887 888988 9999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+.+++.+.+.+...+++. .+.+|.||.|+|..+
T Consensus 110 ~~~~~~~~v~~~~~~~~~----~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 110 DLSSKPFKLWTEFNEDAE----PVTTDAIILATGASA 142 (338)
T ss_dssp ECSSSSEEEEETTCSSSC----CEEEEEEEECCCEEE
T ss_pred EEcCCEEEEEEEecCCCc----EEEeCEEEECcCCCc
Confidence 988877776653112333 679999999999854
No 70
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.19 E-value=7.1e-10 Score=113.61 Aligned_cols=39 Identities=26% Similarity=0.424 Sum_probs=36.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
...+||||||||++|+++|+.|+++|.+|+|+||.+...
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 467999999999999999999999999999999998763
No 71
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.18 E-value=1.8e-10 Score=125.03 Aligned_cols=70 Identities=16% Similarity=0.246 Sum_probs=54.6
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCE
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNI 228 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~ 228 (455)
..++...+...|.+.+.+.|+ +|+.+++|++++.+++.+. |.+. +| ++.+|.
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv-------------------~i~~~t~V~~i~~~~~~v~~V~t~---~G-----~i~Ad~ 198 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGV-------------------TYRGSTTVTGIEQSGGRVTGVQTA---DG-----VIPADI 198 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEEETTEEEEEEET---TE-----EEECSE
T ss_pred ceEcHHHHHHHHHHHHHHcCC-------------------EEECCceEEEEEEeCCEEEEEEEC---Cc-----EEECCE
Confidence 445778899999999999887 9999999999998777653 4332 44 689999
Q ss_pred EEeecCCCchh-hhhcCCC
Q 012845 229 LIGTDGAGSTV-RKLVGID 246 (455)
Q Consensus 229 vV~AdG~~S~v-r~~l~~~ 246 (455)
||.|+|.+|.. .+.++..
T Consensus 199 VV~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 199 VVSCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp EEECCGGGHHHHHHTTTCC
T ss_pred EEECCccchHHHHHHhCCC
Confidence 99999999963 4445543
No 72
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.18 E-value=1.5e-10 Score=119.50 Aligned_cols=139 Identities=16% Similarity=0.214 Sum_probs=89.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+++... | ......+||+... .+...+. +
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G----G-------tw~~~~ypg~~~d-----v~s~~y~-~-- 79 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG----G-------VWYWNRYPGARCD-----VESIDYS-Y-- 79 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----T-------HHHHCCCTTCBCS-----SCTTTSS-C--
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC----C-------ccccCCCCCceeC-----CCchhcc-c--
Confidence 457899999999999999999999999999999987542 1 1111112222100 0000000 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
........ .. .......++.++.++|.+.+++.++. ..++++++|+++
T Consensus 80 --~f~~~~~~------~~-------~~~~~~~~~~ei~~yl~~~~~~~g~~-----------------~~i~~~~~V~~i 127 (549)
T 4ap3_A 80 --SFSPELEQ------EW-------NWSEKYATQPEILAYLEHVADRFDLR-----------------RDIRFDTRVTSA 127 (549)
T ss_dssp --CSCHHHHH------HC-------CCSSSSCBHHHHHHHHHHHHHHTTCG-----------------GGEECSCCEEEE
T ss_pred --cccccccc------CC-------CCccCCCCHHHHHHHHHHHHHHcCCC-----------------ccEEECCEEEEE
Confidence 00000000 00 00112357788999999999988752 278999999999
Q ss_pred eecCC--ceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~~--~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+.+++ .+.|++. +|. ++.+|.||.|+|..|
T Consensus 128 ~~~~~~~~w~V~~~---~G~----~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 128 VLDEEGLRWTVRTD---RGD----EVSARFLVVAAGPLS 159 (549)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSEE
T ss_pred EEcCCCCEEEEEEC---CCC----EEEeCEEEECcCCCC
Confidence 87765 5666665 664 789999999999866
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.17 E-value=2.1e-10 Score=118.06 Aligned_cols=140 Identities=17% Similarity=0.250 Sum_probs=89.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHH-hCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLT-KLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La-~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
+.++||+|||||++|+++|+.|+ +.|++|+|||+++... | ......+||+...+ +...
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G----G-------tw~~~~ypg~~~d~-----~s~~----- 64 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG----G-------TWYWNRYPGALSDT-----ESHL----- 64 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC----T-------HHHHCCCTTCEEEE-----EGGG-----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC----C-------cccccCCCCceecC-----Ccce-----
Confidence 35689999999999999999999 9999999999987552 1 00111112220000 0000
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
...... ..... .........++.++.+.|.+.+++.|+. ..++++++|++
T Consensus 65 ----------~~~~~~--~~~~~-~~~~~~~~~~~~ei~~~l~~~~~~~g~~-----------------~~i~~~~~V~~ 114 (540)
T 3gwf_A 65 ----------YRFSFD--RDLLQ-ESTWKTTYITQPEILEYLEDVVDRFDLR-----------------RHFKFGTEVTS 114 (540)
T ss_dssp ----------SSCCSC--HHHHH-HCCCSBSEEEHHHHHHHHHHHHHHTTCG-----------------GGEEESCCEEE
T ss_pred ----------eeeccc--ccccc-CCCCcccCCCHHHHHHHHHHHHHHcCCc-----------------ceeEeccEEEE
Confidence 000000 00000 0011123356888999999999988752 27899999999
Q ss_pred eeecCC--ceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 200 VSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 200 i~~~~~--~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
++.+++ .+.|++. +|+ ++.+|.||.|+|..|.
T Consensus 115 i~~~~~~~~~~V~~~---~G~----~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 115 ALYLDDENLWEVTTD---HGE----VYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EEEETTTTEEEEEET---TSC----EEEEEEEEECCCSCCS
T ss_pred EEEeCCCCEEEEEEc---CCC----EEEeCEEEECCccccc
Confidence 988765 5666665 665 7899999999998774
No 74
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.16 E-value=2.8e-10 Score=117.50 Aligned_cols=140 Identities=19% Similarity=0.172 Sum_probs=88.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.+... ..+ .....||+.- ..+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G---G~w--------~~~~~pg~~~-----d~~~~------- 70 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG---GVW--------YWNRYPGARC-----DIESI------- 70 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC---THH--------HHCCCTTCBC-----SSCTT-------
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC---Ccc--------cccCCCceee-----ccccc-------
Confidence 457899999999999999999999999999999987652 100 0111122110 00000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
......... .... . .......++.++.++|...+++.+.. ..++++++|+++
T Consensus 71 --------~~~~~f~~~-~~~~-~-~~~~~~~~~~~i~~yl~~~~~~~~l~-----------------~~i~~~~~V~~~ 122 (542)
T 1w4x_A 71 --------EYCYSFSEE-VLQE-W-NWTERYASQPEILRYINFVADKFDLR-----------------SGITFHTTVTAA 122 (542)
T ss_dssp --------TSSCCSCHH-HHHH-C-CCCBSSCBHHHHHHHHHHHHHHTTGG-----------------GGEECSCCEEEE
T ss_pred --------ccccccChh-hhhc-c-CcccccCCHHHHHHHHHHHHHHcCCC-----------------ceEEcCcEEEEE
Confidence 000000000 0000 0 00012346788889998888877641 378999999999
Q ss_pred eecCC--ceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 201 ~~~~~--~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+.+++ .+.|++. +|. ++++|.||.|+|.+|.
T Consensus 123 ~~~~~~~~w~V~~~---~G~----~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 123 AFDEATNTWTVDTN---HGD----RIRARYLIMASGQLSV 155 (542)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSCCC
T ss_pred EEcCCCCeEEEEEC---CCC----EEEeCEEEECcCCCCC
Confidence 87654 4666655 664 7899999999999874
No 75
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.16 E-value=2.5e-10 Score=109.26 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=80.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
+.+||+|||||++|+++|+.|+++|++|+|||+. + +.. +.. . +.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---gg~--~~~--------~------------~~--------- 57 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P---GGQ--LTE--------A------------GI--------- 57 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T---TGG--GGG--------C------------CE---------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C---CCe--ecc--------c------------cc---------
Confidence 4689999999999999999999999999999987 2 110 000 0 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
....+ . ...+....+.+.+.+.+.+.|+ +++. ++|++++
T Consensus 58 -------~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 96 (323)
T 3f8d_A 58 -------VDDYL------------G--LIEIQASDMIKVFNKHIEKYEV-------------------PVLL-DIVEKIE 96 (323)
T ss_dssp -------ECCST------------T--STTEEHHHHHHHHHHHHHTTTC-------------------CEEE-SCEEEEE
T ss_pred -------ccccC------------C--CCCCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEE
Confidence 00000 0 0114567888889999988886 7777 8999999
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
.+++.+.+.+. ++. .+.+|.||.|+|...
T Consensus 97 ~~~~~~~v~~~---~g~----~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 97 NRGDEFVVKTK---RKG----EFKADSVILGIGVKR 125 (323)
T ss_dssp EC--CEEEEES---SSC----EEEEEEEEECCCCEE
T ss_pred ecCCEEEEEEC---CCC----EEEcCEEEECcCCCC
Confidence 88777777665 554 789999999999874
No 76
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.15 E-value=1.8e-10 Score=110.88 Aligned_cols=118 Identities=20% Similarity=0.284 Sum_probs=84.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
..+||+|||||++|+++|+.|++.|++|+|||+.+... |.+... .|... .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------G~~~~~----~~~~~-----~- 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--------------------GQLSAL----YPEKY-----I- 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHH----CTTSE-----E-
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--------------------ceehhc----CCCce-----E-
Confidence 45899999999999999999999999999999987642 111100 00000 0
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
... + ....+....+...|.+.+.+.++ .++++++|++++
T Consensus 56 --------~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~i~ 94 (332)
T 3lzw_A 56 --------YDV-------------A-GFPKIRAQELINNLKEQMAKFDQ-------------------TICLEQAVESVE 94 (332)
T ss_dssp --------CCS-------------T-TCSSEEHHHHHHHHHHHHTTSCC-------------------EEECSCCEEEEE
T ss_pred --------ecc-------------C-CCCCCCHHHHHHHHHHHHHHhCC-------------------cEEccCEEEEEE
Confidence 000 0 00123567888999999888876 899999999998
Q ss_pred ecCC-ceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~-~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
..++ .+.+.+. ++ .+.+|.||.|+|..+.
T Consensus 95 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 95 KQADGVFKLVTN---EE-----THYSKTVIITAGNGAF 124 (332)
T ss_dssp ECTTSCEEEEES---SE-----EEEEEEEEECCTTSCC
T ss_pred ECCCCcEEEEEC---CC-----EEEeCEEEECCCCCcC
Confidence 8766 5666654 54 4789999999998653
No 77
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.12 E-value=6e-10 Score=106.20 Aligned_cols=143 Identities=18% Similarity=0.264 Sum_probs=86.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCc-c------cccChhHHHHHHhhhchHHHHHhcCCCc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQ-A------HFINNRYALVFRKLDGLAEEIERSQPPV 112 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~~~~~~-~------~~l~~~~~~~l~~~~gl~~~l~~~~~~~ 112 (455)
..+||+||||||+|+++|+.|+++ |++|+|+|+.+.+..... + ..+.+.....|..+ +.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~----------Gv~~ 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL----------EIPY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT----------TCCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh----------Cccc
Confidence 457999999999999999999998 999999999877631110 0 01111122222222 2111
Q ss_pred ccccceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhc-ccccccCCCcccccccccccceE
Q 012845 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (455)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i 191 (455)
.. .+. .........+...|++.+.+. |+ ++
T Consensus 134 ~~----------~g~--------------------~~~~~~~~~~~~~L~~~a~~~~GV-------------------~i 164 (326)
T 2gjc_A 134 ED----------EGD--------------------YVVVKHAALFISTVLSKVLQLPNV-------------------KL 164 (326)
T ss_dssp EE----------CSS--------------------EEEESCHHHHHHHHHHHHHTSTTE-------------------EE
T ss_pred cc----------CCC--------------------eEEEcchHHHHHHHHHHHHHhcCc-------------------EE
Confidence 00 000 001113456788888888875 65 99
Q ss_pred EeccEEEEeeecC----C--ceE-EEEEec---cCC----cceeEEEEe---------------CEEEeecCCCchhhhh
Q 012845 192 LMGHECVSVSATD----Q--CIN-VIASFL---KEG----KCTERNIQC---------------NILIGTDGAGSTVRKL 242 (455)
Q Consensus 192 ~~~~~v~~i~~~~----~--~~~-v~~~~~---~~g----~~~~~~~~~---------------d~vV~AdG~~S~vr~~ 242 (455)
+.+++|+++..++ + .+. |.+.+. .++ .....++.+ |+||+|+|..|++.+.
T Consensus 165 ~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~ 244 (326)
T 2gjc_A 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAF 244 (326)
T ss_dssp ETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSH
T ss_pred EecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHH
Confidence 9999999998763 2 332 333211 111 111247899 9999999999988777
Q ss_pred c
Q 012845 243 V 243 (455)
Q Consensus 243 l 243 (455)
+
T Consensus 245 ~ 245 (326)
T 2gjc_A 245 C 245 (326)
T ss_dssp H
T ss_pred H
Confidence 6
No 78
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.12 E-value=9.6e-10 Score=114.01 Aligned_cols=74 Identities=19% Similarity=0.084 Sum_probs=53.7
Q ss_pred ccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEE
Q 012845 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (455)
Q Consensus 151 ~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~v 229 (455)
.++...+...|.+.+.+.|+ +|+.+++|+++..+++.+. |.+....++. ..++.+|.|
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga-------------------~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~--~~~i~A~~V 242 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGA-------------------YLVSKMKAVGFLYEGDQIVGVKARDLLTDE--VIEIKAKLV 242 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEETTEEEEEEEEETTTCC--EEEEEBSCE
T ss_pred eEchHHHHHHHHHHHHHcCC-------------------eEEeccEEEEEEEeCCEEEEEEEEEcCCCC--EEEEEcCEE
Confidence 35566788888888888887 9999999999998776543 5544111232 236899999
Q ss_pred EeecCCCch-hhhhcCC
Q 012845 230 IGTDGAGST-VRKLVGI 245 (455)
Q Consensus 230 V~AdG~~S~-vr~~l~~ 245 (455)
|.|+|.+|. +++..+.
T Consensus 243 V~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 243 INTSGPWVDKVRNLNFT 259 (571)
T ss_dssp EECCGGGHHHHHTTCCS
T ss_pred EECCChhHHHHHHhhcc
Confidence 999999985 5555543
No 79
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.11 E-value=2.6e-10 Score=115.39 Aligned_cols=156 Identities=18% Similarity=0.198 Sum_probs=89.1
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCC---EEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCc--ccc
Q 012845 44 VPVLIVGAGPVGLVLSILLTK---LGIK---CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPV--DLW 115 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~---~g~~---V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~--~~~ 115 (455)
+||+||||||+|+++|..|++ .|++ |+|||+.+.+. ..+..... +|+.. .+.+. ..+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G---G~w~~~~~--------~g~~~----~g~~~~~~~y 67 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG---GQWNYTWR--------TGLDE----NGEPVHSSMY 67 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC---GGGSCCSC--------CSBCT----TSSBCCCCCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC---CEeecCCC--------CCccc----cCCCCcCccc
Confidence 689999999999999999999 9999 99999987652 11111100 01100 00000 001
Q ss_pred cceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEecc
Q 012845 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (455)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~ 195 (455)
..... +....... +. ...+...........+++..+.+.|.+.+++.|+. ..+++++
T Consensus 68 ~~l~~--~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~-----------------~~i~~~~ 124 (464)
T 2xve_A 68 RYLWS--NGPKECLE-FA---DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVR-----------------KYIRFNT 124 (464)
T ss_dssp TTCBC--SSCGGGTC-BT---TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCG-----------------GGEECSE
T ss_pred cchhh--cCChhhcc-cC---CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCc-----------------ceEEeCC
Confidence 10000 00000000 00 00000000000123457889999999999988861 1388999
Q ss_pred EEEEeeecCC--ceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 196 ECVSVSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 196 ~v~~i~~~~~--~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+|++++..++ .+.|++....+| ...++.+|.||.|+|.+|.-
T Consensus 125 ~V~~v~~~~~~~~~~V~~~~~~~g--~~~~~~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 125 AVRHVEFNEDSQTFTVTVQDHTTD--TIYSEEFDYVVCCTGHFSTP 168 (464)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTT--EEEEEEESEEEECCCSSSSB
T ss_pred EEEEEEEcCCCCcEEEEEEEcCCC--ceEEEEcCEEEECCCCCCCC
Confidence 9999987765 677776621123 23478999999999987643
No 80
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.11 E-value=1.9e-10 Score=109.73 Aligned_cols=36 Identities=25% Similarity=0.512 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
|++|||+||||||||+++|+.|+|.|++|+|||+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 678999999999999999999999999999999863
No 81
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.11 E-value=7.6e-10 Score=113.93 Aligned_cols=38 Identities=34% Similarity=0.491 Sum_probs=34.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
...+||+|||||++||++|+.|++ |.+|+|+||.+...
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 457899999999999999999999 99999999987653
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.11 E-value=7.3e-10 Score=112.07 Aligned_cols=154 Identities=16% Similarity=0.235 Sum_probs=86.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC-----CCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCccccc
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG-----IKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWR 116 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g-----~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~ 116 (455)
..+||+|||||++|+++|+.|++.| ++|+|||+.+...... +..+....+. . .+..++.....|...+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~-~~~~~~~~~~----~-~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG-NTLVSQSELQ----I-SFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG-GGCCSSCBCS----S-CTTSSSSTTTCTTCTTS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC-CCCCCCCcCC----c-chhhccccccCCCCCCC
Confidence 4689999999999999999999999 9999999998654111 0000000000 0 00000000000000000
Q ss_pred ceEEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccE
Q 012845 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHE 196 (455)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~ 196 (455)
...+. ...+... .+ .........+..+.++|...+++.+. .++++++
T Consensus 103 ~~~~l-~~~~~~~---------~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~~~ 149 (463)
T 3s5w_A 103 FVNYL-HKHDRLV---------DF----INLGTFYPCRMEFNDYLRWVASHFQE-------------------QSRYGEE 149 (463)
T ss_dssp HHHHH-HHTTCHH---------HH----HHHCCSCCBHHHHHHHHHHHHTTCTT-------------------TEEESEE
T ss_pred hhHhh-hhcCcee---------ec----ccccCCCCCHHHHHHHHHHHHHHcCC-------------------eEEeCCE
Confidence 00000 0000000 00 00011234678888999888888775 8999999
Q ss_pred EEEeeec---CCce--EEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 197 CVSVSAT---DQCI--NVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 197 v~~i~~~---~~~~--~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
|++++.. ++.+ .|.+. ++.+...++.+|.||.|+|...
T Consensus 150 V~~i~~~~~~~~~~~~~V~~~---~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 150 VLRIEPMLSAGQVEALRVISR---NADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEEEEETTEEEEEEEEEE---ETTSCEEEEEESEEEECCCCEE
T ss_pred EEEEEEecCCCceEEEEEEEe---cCCCceEEEEeCEEEECCCCCC
Confidence 9999876 3332 45555 4444444789999999999743
No 83
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.10 E-value=8.5e-10 Score=114.95 Aligned_cols=68 Identities=15% Similarity=0.252 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHhcc-cccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEee
Q 012845 155 YKLNKLLLKQLEKLN-FKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (455)
Q Consensus 155 ~~l~~~L~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~A 232 (455)
..+...|.+.+.+.| + +|++++.|+++..+++.+. +.+....+|. ...+.+|.||.|
T Consensus 134 ~~l~~~L~~~~~~~gnv-------------------~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlA 192 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQI-------------------QRFDEHFVLDILVDDGHVRGLVAMNMMEGT--LVQIRANAVVMA 192 (602)
T ss_dssp HHHHHHHHHHHTTCTTE-------------------EEEETEEEEEEEEETTEEEEEEEEETTTTE--EEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCc-------------------EEEeCCEEEEEEEeCCEEEEEEEEEcCCCc--EEEEEcCeEEEC
Confidence 578888999888877 5 9999999999988766443 3333112342 346899999999
Q ss_pred cCCCchhhhhc
Q 012845 233 DGAGSTVRKLV 243 (455)
Q Consensus 233 dG~~S~vr~~l 243 (455)
+|.+|.++...
T Consensus 193 tGg~s~~~~~~ 203 (602)
T 1kf6_A 193 TGGAGRVYRYN 203 (602)
T ss_dssp CCCCGGGSSSB
T ss_pred CCCCcccccCc
Confidence 99999886554
No 84
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.10 E-value=4e-09 Score=107.66 Aligned_cols=49 Identities=16% Similarity=0.269 Sum_probs=33.5
Q ss_pred ceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCchhhhhcC
Q 012845 189 REILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (455)
Q Consensus 189 ~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~vr~~l~ 244 (455)
++|+++++|++|..+++++. |++. +|+ ++.+|.||.+.+.....++.++
T Consensus 236 g~I~~~~~V~~I~~~~~~~~gV~~~---~g~----~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 236 GEVVLNARVSHMETTGNKIEAVHLE---DGR----RFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEET---TSC----EEECSCEEECCC----------
T ss_pred CceeeecceeEEEeeCCeEEEEEec---CCc----EEEcCEEEECCCHHHHHHHhcc
Confidence 49999999999999888876 5555 775 8899999998888777666664
No 85
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.10 E-value=2e-09 Score=111.71 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=49.0
Q ss_pred chhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecC-CceE-EEEEeccCCcceeEEEEeCEEE
Q 012845 153 SQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILI 230 (455)
Q Consensus 153 ~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~~~~~~d~vV 230 (455)
....+.+.|.+.+++.|+ +|+++++|+++..++ +.+. |.+.. .+| ...++.+|.||
T Consensus 253 ~g~~l~~~L~~~~~~~gv-------------------~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G--~~~~i~A~~VV 310 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGT-------------------DIRLNSRVVRILEDASGKVTGVLVKG-EYT--GYYVIKADAVV 310 (572)
T ss_dssp HHHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEC--CCEEEEEEEE-TTT--EEEEEECSEEE
T ss_pred CHHHHHHHHHHHHHHcCC-------------------eEEecCEEEEEEECCCCeEEEEEEEe-CCC--cEEEEEcCEEE
Confidence 356788999999999887 999999999998765 5443 44441 133 23478999999
Q ss_pred eecCCCchhh
Q 012845 231 GTDGAGSTVR 240 (455)
Q Consensus 231 ~AdG~~S~vr 240 (455)
.|+|.+|..+
T Consensus 311 lAtGg~~~~~ 320 (572)
T 1d4d_A 311 IAAGGFAKNN 320 (572)
T ss_dssp ECCCCCTTCH
T ss_pred EeCCCCccCH
Confidence 9999988643
No 86
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.09 E-value=4.2e-10 Score=107.94 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=78.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++++||+||||||+|+++|+.|++.|++|+|||+.. + +...... +. . .
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~---gg~~~~~----------~~-----------~---~---- 61 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A---GGLTAEA----------PL-----------V---E---- 61 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T---TGGGGGC----------SC-----------B---C----
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C---Ccccccc----------ch-----------h---h----
Confidence 457899999999999999999999999999999842 2 1100000 00 0 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
..+ .. ..+.+..+.+.+.+.+.+.|+ ++++ .+|+.+
T Consensus 62 ----------~~~------------~~--~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i 97 (319)
T 3cty_A 62 ----------NYL------------GF--KSIVGSELAKLFADHAANYAK-------------------IREG-VEVRSI 97 (319)
T ss_dssp ----------CBT------------TB--SSBCHHHHHHHHHHHHHTTSE-------------------EEET-CCEEEE
T ss_pred ----------hcC------------CC--cccCHHHHHHHHHHHHHHcCC-------------------EEEE-eeEEEE
Confidence 000 00 123456777888888888776 7777 789999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+.+++.+.+.+ ++. .+.+|.||.|+|..+.
T Consensus 98 ~~~~~~~~v~~----~~~----~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 98 KKTQGGFDIET----NDD----TYHAKYVIITTGTTHK 127 (319)
T ss_dssp EEETTEEEEEE----SSS----EEEEEEEEECCCEEEC
T ss_pred EEeCCEEEEEE----CCC----EEEeCEEEECCCCCcc
Confidence 88777665543 333 6899999999997653
No 87
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.09 E-value=6.3e-10 Score=105.21 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=79.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
++||+|||||++|+++|+.|++.|++|+|||+.+.... ++.. ..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~-----------------~~~~----------~~--------- 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR-----------------FASH----------SH--------- 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG-----------------GCSC----------CC---------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc-----------------cchh----------hc---------
Confidence 37999999999999999999999999999998652100 0000 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
+ . + .....+...+...+.+.+.+.+. +.++ +.+|+.++.
T Consensus 46 ---~-----~-------------~-~~~~~~~~~~~~~~~~~~~~~~~------------------v~~~-~~~v~~i~~ 84 (297)
T 3fbs_A 46 ---G-----F-------------L-GQDGKAPGEIIAEARRQIERYPT------------------IHWV-EGRVTDAKG 84 (297)
T ss_dssp ---S-----S-------------T-TCTTCCHHHHHHHHHHHHTTCTT------------------EEEE-ESCEEEEEE
T ss_pred ---C-----C-------------c-CCCCCCHHHHHHHHHHHHHhcCC------------------eEEE-EeEEEEEEE
Confidence 0 0 0 00123566788888888887632 2444 569999998
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+++.+.+.+. ++. ++.+|.||.|+|..+.
T Consensus 85 ~~~~~~v~~~---~g~----~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 85 SFGEFIVEID---GGR----RETAGRLILAMGVTDE 113 (297)
T ss_dssp ETTEEEEEET---TSC----EEEEEEEEECCCCEEE
T ss_pred cCCeEEEEEC---CCC----EEEcCEEEECCCCCCC
Confidence 8877777765 664 7899999999998654
No 88
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.09 E-value=7.3e-10 Score=108.37 Aligned_cols=140 Identities=18% Similarity=0.286 Sum_probs=84.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+++||+|||||++|+++|+.|++.|+ +|+|||+.+ +. .. +..++... ....+. +..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G---g~----------~~~~~~~~----~~~~~~--~~~--- 59 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG---HS----------FKHWPKST----RTITPS--FTS--- 59 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT---HH----------HHTSCTTC----BCSSCC--CCC---
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC---Cc----------cccCcccc----cccCcc--hhc---
Confidence 36899999999999999999999999 999999986 31 10 00010000 000000 000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
...+.. ............. ......+++..+...|.+.+++.|+ .++++++|+++
T Consensus 60 --~~~g~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~i~~~~~v~~i 114 (369)
T 3d1c_A 60 --NGFGMP--DMNAISMDTSPAF--TFNEEHISGETYAEYLQVVANHYEL-------------------NIFENTVVTNI 114 (369)
T ss_dssp --GGGTCC--CTTCSSTTCCHHH--HHCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEE
T ss_pred --ccCCch--hhhhccccccccc--cccccCCCHHHHHHHHHHHHHHcCC-------------------eEEeCCEEEEE
Confidence 000000 0000000000000 0001234567788888888888886 89999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+.+++.+.|.+. ++ ++.+|.||.|+|..+
T Consensus 115 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 115 SADDAYYTIATT---TE-----TYHADYIFVATGDYN 143 (369)
T ss_dssp EECSSSEEEEES---SC-----CEEEEEEEECCCSTT
T ss_pred EECCCeEEEEeC---CC-----EEEeCEEEECCCCCC
Confidence 987777777654 44 478999999999876
No 89
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.08 E-value=2.9e-08 Score=101.14 Aligned_cols=37 Identities=30% Similarity=0.405 Sum_probs=34.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
++||+|||||++||++|+.|+++|++|+|||+++.+.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4899999999999999999999999999999998764
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.07 E-value=2.2e-10 Score=118.05 Aligned_cols=140 Identities=14% Similarity=0.252 Sum_probs=88.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+|||||++|+++|+.|++.|++|+|||+++... .. .....+||+.- ..+...+. +
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~G---Gt--------w~~~~yPg~~~-----d~~~~~y~-~-- 67 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVG---GT--------WYWNRYPGCRL-----DTESYAYG-Y-- 67 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC---TH--------HHHCCCTTCBC-----SSCHHHHC-H--
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC---Cc--------cccCCCCceee-----cCchhhcc-c--
Confidence 346899999999999999999999999999999987652 11 01111222100 00000000 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+ ...... .. .......++.++...+.+.+++.++. ..++++++|+++
T Consensus 68 ~f--~~~~~~------~~-------~~~~~~~~~~ei~~yl~~~~~~~~l~-----------------~~i~~~~~V~~~ 115 (545)
T 3uox_A 68 FA--LKGIIP------EW-------EWSENFASQPEMLRYVNRAADAMDVR-----------------KHYRFNTRVTAA 115 (545)
T ss_dssp HH--HTTSST------TC-------CCSBSSCBHHHHHHHHHHHHHHHTCG-----------------GGEECSCCEEEE
T ss_pred cc--Cccccc------CC-------CccccCCCHHHHHHHHHHHHHHcCCc-----------------CcEEECCEEEEE
Confidence 00 000000 00 00112346788999999998887752 278899999999
Q ss_pred eecCC--ceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 201 ~~~~~--~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+.+++ .+.|++. +|. ++.+|.||.|+|..|.
T Consensus 116 ~~~~~~~~w~V~~~---~G~----~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 116 RYVENDRLWEVTLD---NEE----VVTCRFLISATGPLSA 148 (545)
T ss_dssp EEEGGGTEEEEEET---TTE----EEEEEEEEECCCSCBC
T ss_pred EEeCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCC
Confidence 87554 5666665 664 7899999999998764
No 91
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.07 E-value=4.2e-09 Score=109.44 Aligned_cols=38 Identities=21% Similarity=0.427 Sum_probs=35.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..++||+|||||++|+++|+.|++.|.+|+|+||.+..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 45789999999999999999999999999999998654
No 92
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.07 E-value=8.6e-10 Score=105.25 Aligned_cols=114 Identities=19% Similarity=0.296 Sum_probs=80.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
+||+||||||+|+++|+.|++.|+ +|+|||+.. + .+..... . .+ .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~----gg~~~~~--------~-~~--------------~------ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P----GGQITGS--------S-EI--------------E------ 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T----TCGGGGC--------S-CB--------------C------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C----Ccccccc--------c-cc--------------c------
Confidence 699999999999999999999999 999999852 1 1110000 0 00 0
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
.. +.....+++..+.+.|.+.+.+.|+ +++. ++|++++.
T Consensus 48 --------~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~-~~v~~i~~ 86 (311)
T 2q0l_A 48 --------NY-------------PGVKEVVSGLDFMQPWQEQCFRFGL-------------------KHEM-TAVQRVSK 86 (311)
T ss_dssp --------CS-------------TTCCSCBCHHHHHHHHHHHHHTTSC-------------------EEEC-SCEEEEEE
T ss_pred --------cC-------------CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEEE
Confidence 00 0000134677888889888888876 7777 78999988
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+.+. ++. ++.+|.||.|+|..+..
T Consensus 87 ~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 87 KDSHFVILAE---DGK----TFEAKSVIIATGGSPKR 116 (311)
T ss_dssp ETTEEEEEET---TSC----EEEEEEEEECCCEEECC
T ss_pred cCCEEEEEEc---CCC----EEECCEEEECCCCCCCC
Confidence 7776666554 554 78999999999976643
No 93
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.07 E-value=4.1e-09 Score=110.60 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=34.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||||||||++||++|+.|++.|.+|+|+||....
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 45789999999999999999999999999999998654
No 94
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.07 E-value=1e-10 Score=112.84 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=80.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+||||||+|+++|+.|++.|++|+|||+.........+. +. . . ..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~------------~-------~------~~--- 56 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-LT------------T-------T------TD--- 56 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GG------------G-------C------SE---
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-ee------------e-------c------cc---
Confidence 356899999999999999999999999999999821110001110 00 0 0 00
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.... +.....+.+..+...|.+.+.+.|+ +++.++ |+.+
T Consensus 57 --------~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~~~-v~~i 95 (333)
T 1vdc_A 57 --------VENF-------------PGFPEGILGVELTDKFRKQSERFGT-------------------TIFTET-VTKV 95 (333)
T ss_dssp --------ECCS-------------TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECCC-CCEE
T ss_pred --------cccC-------------CCCccCCCHHHHHHHHHHHHHHCCC-------------------EEEEeE-EEEE
Confidence 0000 0000124567888888888888886 888887 8888
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+..++.+.+.+ ++. ++.+|.||.|+|.++.
T Consensus 96 ~~~~~~~~v~~----~~~----~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 96 DFSSKPFKLFT----DSK----AILADAVILAIGAVAK 125 (333)
T ss_dssp ECSSSSEEEEC----SSE----EEEEEEEEECCCEEEC
T ss_pred EEcCCEEEEEE----CCc----EEEcCEEEECCCCCcC
Confidence 87777666653 332 7899999999998764
No 95
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.07 E-value=1.4e-09 Score=104.49 Aligned_cols=115 Identities=21% Similarity=0.288 Sum_probs=80.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+||||||+|+++|+.|++.|++|+|||+. .+ + +. +.. ...+ ..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~---g-g~-~~~--------~~~~-----------~~------ 54 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP---G-GQ-IAW--------SEEV-----------EN------ 54 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT---T-GG-GGG--------CSCB-----------CC------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC---C-cc-ccc--------cccc-----------cc------
Confidence 35689999999999999999999999999999997 22 1 10 000 0000 00
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.+ .+ + ..+++..+.+.+.+.+.+.|+ +++. .+|+++
T Consensus 55 -----------~~-----~~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~~~~-~~v~~i 90 (325)
T 2q7v_A 55 -----------FP-----GF-----P---EPIAGMELAQRMHQQAEKFGA-------------------KVEM-DEVQGV 90 (325)
T ss_dssp -----------ST-----TC-----S---SCBCHHHHHHHHHHHHHHTTC-------------------EEEE-CCEEEE
T ss_pred -----------CC-----CC-----C---CCCCHHHHHHHHHHHHHHcCC-------------------EEEe-eeEEEE
Confidence 00 00 0 124566788888888888886 7776 689998
Q ss_pred eec--CCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SAT--DQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~--~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+.. ++. +.+.+. +|. .+.+|.||.|+|..+
T Consensus 91 ~~~~~~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 91 QHDATSHPYPFTVRG---YNG----EYRAKAVILATGADP 123 (325)
T ss_dssp EECTTSSSCCEEEEE---SSC----EEEEEEEEECCCEEE
T ss_pred EeccCCCceEEEEEC---CCC----EEEeCEEEECcCCCc
Confidence 876 443 566655 664 789999999999865
No 96
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.06 E-value=2.6e-09 Score=111.31 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceE-EEEEeccCCcceeEEEEeCEEEeec
Q 012845 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (455)
Q Consensus 155 ~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~Ad 233 (455)
..+...|.+.+.+.|+ +|+.++.|+++..+++.+. |.+....+|. ...+.++.||.|+
T Consensus 155 ~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlAT 213 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDT-------------------SYFVEYFALDLLMENGECRGVIALCIEDGT--IHRFRAKNTVIAT 213 (621)
T ss_dssp HHHHHHHHHHHTTSCC-------------------EEEETEEEEEEEEETTEEEEEEEEETTTCC--EEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEEceEEEEEEEECCEEEEEEEEEcCCCc--EEEEEcCeEEECC
Confidence 4788889999888776 9999999999987666543 4443212342 3478999999999
Q ss_pred CCCchh
Q 012845 234 GAGSTV 239 (455)
Q Consensus 234 G~~S~v 239 (455)
|..+.+
T Consensus 214 GG~~~~ 219 (621)
T 2h88_A 214 GGYGRT 219 (621)
T ss_dssp CCCGGG
T ss_pred Cccccc
Confidence 999864
No 97
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.06 E-value=1.8e-09 Score=113.21 Aligned_cols=171 Identities=16% Similarity=0.095 Sum_probs=93.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCCCCCC--cc-cccC----hhH-HH-------------
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTHP--QA-HFIN----NRY-AL------------- 93 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~------g~~V~l~Er~~~~~~~~--~~-~~l~----~~~-~~------------- 93 (455)
..++||||||||+|||++|+.|+++ |.+|+|+||........ .| .+++ ... ..
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 4579999999999999999999998 99999999986543211 11 1221 100 01
Q ss_pred ------HH-HhhhchHHHHHhcCCCcccccceEEeecCCCCccc-----cccCCCccccccccCCccccccchhhHHHHH
Q 012845 94 ------VF-RKLDGLAEEIERSQPPVDLWRKFIYCTSVTGPILG-----SVDHMQPQDFEKVVSPVSVAHFSQYKLNKLL 161 (455)
Q Consensus 94 ------~l-~~~~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L 161 (455)
.+ +..+...+.+...+.+.... ...|.... .+...................++...+.+.|
T Consensus 100 d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~-------~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L 172 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFEEWGLPVWIK-------DEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIV 172 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCBCEE-------CSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCceec-------CCCCccccchhhhccccccccCccccccceecccCCHHHHHHHH
Confidence 11 01111222333334332110 01111110 0000000000000000001223455788889
Q ss_pred HHHHHhc--ccccccCCCcccccccccccceEEeccEEEEeeecCC---ceE-EEEEeccCCcceeEEEEeCEEEeecCC
Q 012845 162 LKQLEKL--NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ---CIN-VIASFLKEGKCTERNIQCNILIGTDGA 235 (455)
Q Consensus 162 ~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~---~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~ 235 (455)
.+.+.+. |+ +|+.++.|+++..+++ .+. +......+|. ...+.++.||.|+|.
T Consensus 173 ~~~a~~~~~gV-------------------~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~--~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 173 AEAAKNALGQD-------------------RIIERIFIVKLLLDKNTPNRIAGAVGFNLRANE--VHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHCTT-------------------TEECSEEECCCEECSSSTTBEEEEEEEESSSSC--EEEEECSEEEECCCC
T ss_pred HHHHHhcCCCc-------------------EEEEceEEEEEEEeCCccceEEEEEEEEcCCCc--EEEEEeCEEEECCCc
Confidence 9988887 76 8999999999987765 443 3333112332 347899999999998
Q ss_pred Cchh
Q 012845 236 GSTV 239 (455)
Q Consensus 236 ~S~v 239 (455)
.+.+
T Consensus 232 ~g~~ 235 (662)
T 3gyx_A 232 AVNV 235 (662)
T ss_dssp BCSS
T ss_pred cccc
Confidence 8853
No 98
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.04 E-value=7.7e-10 Score=105.97 Aligned_cols=114 Identities=17% Similarity=0.288 Sum_probs=79.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
++++||+||||||+|+++|+.|++.|++|+|||+. .+ .+... .. . .. .
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~----gg~~~---------~~-~----------~~---~---- 50 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EK----GGQLT---------TT-T----------EV---E---- 50 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-ST----TGGGG---------GC-S----------BC---C----
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CC----CceEe---------cc-h----------hh---h----
Confidence 45789999999999999999999999999999964 21 11100 00 0 00 0
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.. +.....+.+..+.+.+.+.+.+.++ +++.++ |+.+
T Consensus 51 ----------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-v~~i 87 (320)
T 1trb_A 51 ----------NW-------------PGDPNDLTGPLLMERMHEHATKFET-------------------EIIFDH-INKV 87 (320)
T ss_dssp ----------CS-------------TTCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred ----------hC-------------CCCCCCCCHHHHHHHHHHHHHHCCC-------------------EEEEee-eeEE
Confidence 00 0000124566788888888888876 888886 8898
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+..++.+.+ .. ++. ++.+|.||.|+|..+
T Consensus 88 ~~~~~~~~v-~~---~~~----~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 88 DLQNRPFRL-NG---DNG----EYTCDALIIATGASA 116 (320)
T ss_dssp ECSSSSEEE-EE---SSC----EEEEEEEEECCCEEE
T ss_pred EecCCEEEE-Ee---CCC----EEEcCEEEECCCCCc
Confidence 877777766 44 554 789999999999765
No 99
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.04 E-value=5.4e-09 Score=106.02 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=45.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCCCCCC-----cc----------cccChhHHHHHHhhhchHHHH
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAFSTHP-----QA----------HFINNRYALVFRKLDGLAEEI 105 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~~~~~~~-----~~----------~~l~~~~~~~l~~~~gl~~~l 105 (455)
++||+|||||++||++|+.|+++| ++|+|||+.+....+. .+ ....+...++++++ |+.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~l-g~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAI-GLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHT-TCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHc-CCcceE
Confidence 579999999999999999999999 9999999987653211 11 11234566777777 765443
No 100
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.04 E-value=3e-10 Score=109.83 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=78.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+||||||+|+++|+.|++.|++|+|||+.. + .+.... . ....
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~~~~---------~-----------~~~~------- 59 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F----GGALMT---------T-----------TDVE------- 59 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C----SCGGGS---------C-----------SCBC-------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C----CCceec---------c-----------chhh-------
Confidence 456899999999999999999999999999999652 1 111000 0 0000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.. +.....+.+..+...|.+.+.+.|+ ++++++ |+++
T Consensus 60 ----------~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~~~-v~~i 96 (335)
T 2a87_A 60 ----------NY-------------PGFRNGITGPELMDEMREQALRFGA-------------------DLRMED-VESV 96 (335)
T ss_dssp ----------CS-------------TTCTTCBCHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred ----------hc-------------CCCCCCCCHHHHHHHHHHHHHHcCC-------------------EEEEee-EEEE
Confidence 00 0000124566788888888888876 888887 8888
Q ss_pred eecCCceEE-EEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATDQCINV-IASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~~~~~v-~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+. ++.+.+ .+. ++. ++.+|.||.|+|..+
T Consensus 97 ~~-~~~~~v~~~~---~g~----~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 97 SL-HGPLKSVVTA---DGQ----THRARAVILAMGAAA 126 (335)
T ss_dssp EC-SSSSEEEEET---TSC----EEEEEEEEECCCEEE
T ss_pred Ee-CCcEEEEEeC---CCC----EEEeCEEEECCCCCc
Confidence 77 555666 443 554 789999999999865
No 101
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.03 E-value=2.8e-09 Score=106.68 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=33.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|+.|+++|++|+|||+++.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 69999999999999999999999999999997655
No 102
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.01 E-value=4.8e-10 Score=107.13 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=33.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+..|||+||||||||+++|+.|+++|++|+|||+...
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 3459999999999999999999999999999998653
No 103
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.99 E-value=1.7e-08 Score=103.53 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+..+||+|||||++||++|+.|+++|++|+|||+++.+.
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVG 40 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 346799999999999999999999999999999988763
No 104
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.97 E-value=8.7e-09 Score=104.36 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
||+|||||++|+++|+.|++.|.+|+|+||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 8999999999999999999999999999998
No 105
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.96 E-value=3.2e-09 Score=101.18 Aligned_cols=112 Identities=17% Similarity=0.345 Sum_probs=78.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
++||+||||||+|+++|+.|++.|++|+|+|+.. .|.... .. ++ ..+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~------gG~~~~--------~~-~~--------------~~~---- 47 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF------GGQILD--------TV-DI--------------ENY---- 47 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST------TGGGGG--------CC-EE--------------CCB----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC------Cceecc--------cc-cc--------------ccc----
Confidence 3799999999999999999999999999998531 111000 00 00 000
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
. . ....++..+.+.+.+.+.+.|+ +++.+++|+.++.
T Consensus 48 ------~----------------~--~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~~~v~~i~~ 84 (310)
T 1fl2_A 48 ------I----------------S--VPKTEGQKLAGALKVHVDEYDV-------------------DVIDSQSASKLIP 84 (310)
T ss_dssp ------T----------------T--BSSEEHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEEEC
T ss_pred ------c----------------C--cCCCCHHHHHHHHHHHHHHcCC-------------------eEEccCEEEEEEe
Confidence 0 0 0113456788888888888776 8999999999976
Q ss_pred cC---CceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 203 TD---QCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 203 ~~---~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+. +.+.+.+. +|. ++.+|.||.|+|..+
T Consensus 85 ~~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 85 AAVEGGLHQIETA---SGA----VLKARSIIVATGAKW 115 (310)
T ss_dssp CSSTTCCEEEEET---TSC----EEEEEEEEECCCEEE
T ss_pred cccCCceEEEEEC---CCC----EEEeCEEEECcCCCc
Confidence 43 25666654 554 789999999999865
No 106
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.89 E-value=3.5e-08 Score=103.69 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHH---h-CCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLT---K-LGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La---~-~g~~V~l~Er~~~~ 78 (455)
..++||||||||+|||++|+.|+ + .|.+|+|+||....
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 35689999999999999999999 6 89999999998753
No 107
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.88 E-value=1.5e-08 Score=102.98 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.++||+|||||++|+++|+.|+++|++|+||||.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4699999999999999999999999999999994
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.87 E-value=5.7e-09 Score=106.09 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 45799999999999999999999999999999997654
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.87 E-value=3.2e-09 Score=107.84 Aligned_cols=38 Identities=32% Similarity=0.576 Sum_probs=34.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 45689999999999999999999999999999997554
No 110
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.87 E-value=1e-08 Score=103.67 Aligned_cols=33 Identities=33% Similarity=0.623 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
++||+||||||+|+++|+.|++.|++|+|||+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 589999999999999999999999999999997
No 111
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.86 E-value=1.2e-08 Score=97.45 Aligned_cols=36 Identities=25% Similarity=0.553 Sum_probs=33.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.++|||+||||||||+++|+.|++.|++|+||||..
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 457999999999999999999999999999999853
No 112
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.86 E-value=7.1e-08 Score=102.94 Aligned_cols=39 Identities=38% Similarity=0.618 Sum_probs=35.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 468999999999999999999999999999999876643
No 113
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.85 E-value=4.2e-09 Score=108.10 Aligned_cols=114 Identities=16% Similarity=0.320 Sum_probs=80.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. .|.... .. ++ ..+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~------GG~~~~--------~~-~~-----------~~~----- 258 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF------GGQVLD--------TV-DI-----------ENY----- 258 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST------TGGGTT--------CS-CB-----------CCB-----
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC------CCcccc--------cc-cc-----------ccc-----
Confidence 457899999999999999999999999999998631 111000 00 10 000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
. . ........+...|.+.+.+.|+ +++.+++|+.+
T Consensus 259 --------~----------------~--~~~~~~~~l~~~l~~~~~~~gv-------------------~v~~~~~v~~i 293 (521)
T 1hyu_A 259 --------I----------------S--VPKTEGQKLAGALKAHVSDYDV-------------------DVIDSQSASKL 293 (521)
T ss_dssp --------T----------------T--BSSBCHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEE
T ss_pred --------C----------------C--CCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEE
Confidence 0 0 0113466788888888888886 89999999999
Q ss_pred eecC---CceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 201 SATD---QCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 201 ~~~~---~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
+.+. +.+.|.+. +|. ++.+|.||.|+|..+
T Consensus 294 ~~~~~~~~~~~V~~~---~g~----~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 294 VPAATEGGLHQIETA---SGA----VLKARSIIIATGAKW 326 (521)
T ss_dssp ECCSSTTSCEEEEET---TSC----EEEEEEEEECCCEEE
T ss_pred EeccCCCceEEEEEC---CCC----EEEcCEEEECCCCCc
Confidence 7542 25666655 664 789999999999765
No 114
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.85 E-value=6.5e-09 Score=105.37 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=33.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~~~ 79 (455)
+||+|||||++||++|+.|+++|. +|+|||+++.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 589999999999999999999999 999999987653
No 115
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.80 E-value=1e-08 Score=104.68 Aligned_cols=65 Identities=9% Similarity=0.048 Sum_probs=50.4
Q ss_pred cccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecC--------CceEEEEEeccCCccee
Q 012845 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD--------QCINVIASFLKEGKCTE 221 (455)
Q Consensus 150 ~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~--------~~~~v~~~~~~~g~~~~ 221 (455)
....|.++.++|...+++.+. .|+++++|++++..+ +.+.|++...+ ++..
T Consensus 140 ~~p~r~E~~~Yl~~~A~~~~~-------------------~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~--~g~~ 198 (501)
T 4b63_A 140 FLPARLEFEDYMRWCAQQFSD-------------------VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE--TGEI 198 (501)
T ss_dssp SCCBHHHHHHHHHHHHHTTGG-------------------GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETT--TCCE
T ss_pred CCCCHHHHHHHHHHHHHHcCC-------------------ceEcceEEEeeccccccccccccceEEEEEecCC--CceE
Confidence 346799999999999998764 799999999997643 24777776322 3345
Q ss_pred EEEEeCEEEeecCC
Q 012845 222 RNIQCNILIGTDGA 235 (455)
Q Consensus 222 ~~~~~d~vV~AdG~ 235 (455)
.++.++.||.|+|.
T Consensus 199 ~~~~ar~vVlatG~ 212 (501)
T 4b63_A 199 SARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEEEECCCC
T ss_pred EEEEeCEEEECcCC
Confidence 57899999999994
No 116
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.77 E-value=3.4e-08 Score=94.03 Aligned_cols=111 Identities=19% Similarity=0.273 Sum_probs=76.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l-~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
..+||+|||||++|+++|+.|+++|++|+| +||. .+ .|..... . . ...+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~----gG~~~~~--------~-~-----------~~~~----- 52 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MP----GGQITSS--------S-E-----------IENY----- 52 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-ST----TGGGGGC--------S-C-----------BCCS-----
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CC----Cceeeee--------c-e-----------eccC-----
Confidence 458999999999999999999999999999 9993 32 1110000 0 0 0000
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
+.....+....+...+.+.+.+.++ .++.+ +|+++
T Consensus 53 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~-~v~~i 87 (315)
T 3r9u_A 53 -------------------------PGVAQVMDGISFMAPWSEQCMRFGL-------------------KHEMV-GVEQI 87 (315)
T ss_dssp -------------------------TTCCSCBCHHHHHHHHHHHHTTTCC-------------------EEECC-CEEEE
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHHHHHcCc-------------------EEEEE-EEEEE
Confidence 0001124567888889999888886 78887 88888
Q ss_pred eecC--CceEEEEEeccCCcceeEEEEeCEEEeecCC
Q 012845 201 SATD--QCINVIASFLKEGKCTERNIQCNILIGTDGA 235 (455)
Q Consensus 201 ~~~~--~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~ 235 (455)
.++ +.+.+.+. .+. ++.+|.||.|+|.
T Consensus 88 -~~~~~~~~~v~~~---~~~----~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 88 -LKNSDGSFTIKLE---GGK----TELAKAVIVCTGS 116 (315)
T ss_dssp -EECTTSCEEEEET---TSC----EEEEEEEEECCCE
T ss_pred -ecCCCCcEEEEEe---cCC----EEEeCEEEEeeCC
Confidence 655 56664333 332 6789999999997
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=1.4e-08 Score=102.79 Aligned_cols=38 Identities=37% Similarity=0.589 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998654
No 118
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.73 E-value=2.7e-08 Score=100.59 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
++++||+||||||+|+++|+.|++.|++|+||||++..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 45799999999999999999999999999999987654
No 119
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.72 E-value=2.8e-08 Score=100.73 Aligned_cols=62 Identities=23% Similarity=0.322 Sum_probs=46.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccc-------------cc--ChhHHHHHHhhhchHHH
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAH-------------FI--NNRYALVFRKLDGLAEE 104 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~-------------~l--~~~~~~~l~~~~gl~~~ 104 (455)
.++||+|||||++||++|+.|+++|++|+|||+++.+..+.... .. .+...++++++ |+.+.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~-gl~~~ 91 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAAL-NLEGR 91 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHT-TCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHc-CCcce
Confidence 46899999999999999999999999999999998764322111 11 35667788887 77543
No 120
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.70 E-value=2.3e-09 Score=104.22 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=32.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g------~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|+.|+++| .+|+|+|+....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 38999999999999999999998 999999998643
No 121
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.68 E-value=8.9e-08 Score=97.50 Aligned_cols=38 Identities=32% Similarity=0.640 Sum_probs=33.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
++++||+||||||+|+++|+.|++.|++|+||||.+..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45799999999999999999999999999999987654
No 122
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.67 E-value=4.4e-08 Score=98.04 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=32.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~ 77 (455)
+++||+|||||++|+++|..|++.|+ +|+|||+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 46899999999999999999999998 6999998754
No 123
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.63 E-value=5e-08 Score=96.90 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~ 77 (455)
.||+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 379999999999999999999 8999999999873
No 124
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.62 E-value=1.1e-07 Score=93.69 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=34.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.++.+|+|||||+||+++|..|++.+.+|+|||+.+..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 45789999999999999999998889999999998764
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.61 E-value=1.5e-07 Score=98.07 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=34.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+..||+|||||+||+++|..|++. |++|+|||+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 457999999999999999999998 8999999998765
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.60 E-value=9.4e-08 Score=95.13 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=34.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~--V~l~Er~~~~ 78 (455)
++++||+|||||++|+++|..|+++|++ |+|+|+.+.+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 3568999999999999999999999987 9999998754
No 127
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.59 E-value=7.5e-08 Score=96.98 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=32.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 8999999998765
No 128
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=3.3e-07 Score=92.28 Aligned_cols=34 Identities=41% Similarity=0.641 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3589999999999999999999999999999997
No 129
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.57 E-value=8.9e-08 Score=96.99 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
++||+|||||++|+++|..|++. |++|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46899999999999999999999 8999999998765
No 130
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.57 E-value=1.3e-07 Score=95.59 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
++||+|||||++|+++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998654
No 131
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.57 E-value=1.1e-07 Score=96.67 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=33.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC---CCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG---IKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g---~~V~l~Er~~~~ 78 (455)
+++||+|||||++|+++|..|++.| .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 4689999999999999999999988 999999998754
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.56 E-value=1.3e-07 Score=95.80 Aligned_cols=38 Identities=34% Similarity=0.573 Sum_probs=34.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 35689999999999999999999999999999998654
No 133
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.55 E-value=8.6e-07 Score=90.78 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=33.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+.++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 457999999999999999999999999999999975
No 134
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.54 E-value=3.3e-07 Score=92.87 Aligned_cols=37 Identities=38% Similarity=0.624 Sum_probs=34.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+++||+|||||++|+++|+.|++.|++|+||||.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4699999999999999999999999999999998744
No 135
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.53 E-value=1.6e-06 Score=88.96 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 45689999999999999999999999999999998643
No 136
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.52 E-value=2.1e-07 Score=93.74 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999998 9999999998754
No 137
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.51 E-value=6.7e-08 Score=96.91 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.9
Q ss_pred cCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~---~g~~V~l~Er~~~ 77 (455)
.||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 689999999999999999999 8999999999874
No 138
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.51 E-value=1.9e-07 Score=94.63 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=32.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
+.++||+||||||+|+++|+.|++.|++|+||||.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 45799999999999999999999999999999976
No 139
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=9.4e-07 Score=89.59 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=33.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+.++||+|||||++|+++|+.|++.|.+|+||||+.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 357899999999999999999999999999999973
No 140
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.49 E-value=1.8e-07 Score=94.06 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
.+||+|||||++|+++|..|++. |++|+|||+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 8899999998754
No 141
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.49 E-value=1.7e-07 Score=94.72 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er 74 (455)
.++||+||||||+|+++|+.|+++|++|+||||
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 469999999999999999999999999999999
No 142
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.48 E-value=2.9e-07 Score=95.41 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
.||+|||||+||+++|..|++. |++|+|||+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4799999999999999999998 8899999998765
No 143
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.48 E-value=7.3e-08 Score=98.46 Aligned_cols=40 Identities=30% Similarity=0.524 Sum_probs=36.1
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCC
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFS 79 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~~~~ 79 (455)
+.+++||+|||||++||++|+.|+++ |++|+|||+++.+.
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 35679999999999999999999985 99999999998764
No 144
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.48 E-value=3.6e-07 Score=92.06 Aligned_cols=35 Identities=46% Similarity=0.761 Sum_probs=32.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+||+||||||+|+++|+.|++.|++|+|||+.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 79999999999999999999999999999998654
No 145
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=3.9e-07 Score=89.09 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=31.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.-.||+|||||+||+++|..|++.| +|+|||+.+..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 3479999999999999999999999 99999998754
No 146
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.47 E-value=3.9e-07 Score=92.41 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=32.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999996 8999999998754
No 147
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.46 E-value=3.5e-07 Score=90.62 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~~ 78 (455)
.||+|||||++|+++|..|++.|+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 589999999999999999999998 89999998743
No 148
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.46 E-value=6.9e-07 Score=90.29 Aligned_cols=35 Identities=20% Similarity=0.468 Sum_probs=33.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999999999999999987
No 149
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=3.4e-07 Score=91.96 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=32.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999998 9999999998754
No 150
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.46 E-value=3e-06 Score=88.48 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=34.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+..+||+|||||++|+++|+.|+++|++|+|+|+.+...
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 457999999999999999999999999999999987654
No 151
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.44 E-value=1e-06 Score=86.68 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=81.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 468999999999999999999999999999987653110
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
.....+.+.|.+.+++.|+ +++.+++|++++.
T Consensus 184 -----------------------------~~~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 215 (384)
T 2v3a_A 184 -----------------------------LLHPAAAKAVQAGLEGLGV-------------------RFHLGPVLASLKK 215 (384)
T ss_dssp -----------------------------TSCHHHHHHHHHHHHTTTC-------------------EEEESCCEEEEEE
T ss_pred -----------------------------ccCHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEe
Confidence 0012445566777777786 9999999999988
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh--hhhcCCC
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV--RKLVGID 246 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v--r~~l~~~ 246 (455)
+++.+.+.+. +|. ++.+|.||.|+|..+.. -+.++..
T Consensus 216 ~~~~~~v~~~---~g~----~i~~d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 216 AGEGLEAHLS---DGE----VIPCDLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECCHHHHHTTCC
T ss_pred cCCEEEEEEC---CCC----EEECCEEEECcCCCcCHHHHHHCCCC
Confidence 7776666655 664 78999999999987653 3444543
No 152
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.43 E-value=2.8e-07 Score=91.58 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~--V~l~Er~~~~ 78 (455)
.+|+|||||+||+++|..|++.|++ |+|||+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 4899999999999999999999988 9999998754
No 153
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.43 E-value=1.9e-06 Score=91.36 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=35.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..++||+|||||++|+++|+.|+++|++|+|||+.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998754
No 154
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.42 E-value=5.4e-07 Score=89.39 Aligned_cols=38 Identities=21% Similarity=0.361 Sum_probs=33.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~--V~l~Er~~~~ 78 (455)
.+++||+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 3568999999999999999999999984 9999998653
No 155
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.41 E-value=1.2e-07 Score=96.53 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=32.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.++||+||||||+|+++|+.|++.|++|+|+||.+
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46999999999999999999999999999999864
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.40 E-value=1.2e-06 Score=88.06 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=77.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-------------------~~--------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-------------------TM--------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.|.+.+++.|+ +++.+++|++++.
T Consensus 207 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 236 (455)
T 2yqu_A 207 -------------------------------DLEVSRAAERVFKKQGL-------------------TIRTGVRVTAVVP 236 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEECCEEEEEEE
Confidence 01344445666677776 9999999999998
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+.+. +|. ++.+|.||.|+|..+..
T Consensus 237 ~~~~v~v~~~---~g~----~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 EAKGARVELE---GGE----VLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred eCCEEEEEEC---CCe----EEEcCEEEECcCCCcCC
Confidence 7776666554 554 78999999999987754
No 157
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.40 E-value=8.6e-07 Score=90.35 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~---g~~V~l~Er~~ 76 (455)
++||+|||||++|+++|+.|++. |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999976
No 158
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.40 E-value=2.1e-07 Score=93.00 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=32.4
Q ss_pred cCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~--~g~~V~l~Er~~~~ 78 (455)
.||+|||||++|+++|+.|++ .|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999999 78999999998654
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.39 E-value=7.4e-07 Score=89.97 Aligned_cols=35 Identities=26% Similarity=0.525 Sum_probs=33.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36899999999999999999999999999999976
No 160
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.38 E-value=1.1e-06 Score=88.57 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=33.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
+.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 35689999999999999999999999999999987
No 161
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=5.8e-07 Score=91.63 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
++||+|||||++|+++|..|++.|.+|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 162
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=8.8e-07 Score=87.10 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=31.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~ 76 (455)
+.++||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 34689999999999999999999998 5699999875
No 163
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.35 E-value=2.3e-06 Score=86.92 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 357999999999999999999999999999999854
No 164
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2.8e-07 Score=88.53 Aligned_cols=38 Identities=37% Similarity=0.541 Sum_probs=33.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAFS 79 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~--~g~~V~l~Er~~~~~ 79 (455)
..+||+|||||||||++|+.|++ .|++|+||||.+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 35799999999999999999975 599999999987764
No 165
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.35 E-value=1.9e-06 Score=86.28 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~~~ 78 (455)
++|+|||||+||+++|..|++.| .+|+|||+.+..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 47999999999999999999988 569999997643
No 166
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.35 E-value=3.9e-07 Score=91.70 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=36.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
+.++||+|||||++||++|+.|+++|++|+|+|+++.+..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4578999999999999999999999999999999987753
No 167
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.34 E-value=3.6e-06 Score=86.27 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=33.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|||+||||||+|+.+|+.+++.|.+|.|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 59999999999999999999999999999998764
No 168
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=3e-06 Score=85.32 Aligned_cols=34 Identities=35% Similarity=0.578 Sum_probs=32.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 5689999999999999999999999999999983
No 169
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.33 E-value=3.5e-07 Score=91.44 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=30.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~~ 77 (455)
.+|||||||+||+++|..|++.+ ++|+|||+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 36999999999999999999875 78999998764
No 170
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.31 E-value=5.8e-06 Score=83.80 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
+.++||+||||||+|+++|+.|++.|++|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35799999999999999999999999999999964
No 171
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.31 E-value=2e-06 Score=83.09 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=32.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+||+|||||+||+.+|+.|++.|.+|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5899999999999999999999999999999873
No 172
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.30 E-value=1.6e-06 Score=88.17 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er 74 (455)
+.++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 457999999999999999999999 9999999994
No 173
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.29 E-value=6e-07 Score=91.36 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=33.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..++||+|||||++|+++|+.|+++ ++|+|||+.+.+
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 3468999999999999999999999 999999998764
No 174
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.29 E-value=6e-06 Score=83.26 Aligned_cols=103 Identities=18% Similarity=0.277 Sum_probs=78.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 208 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-------------------QG--------------------- 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765411 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.|.+.+++.|+ +++.+++|++++.
T Consensus 209 -------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~ 238 (464)
T 2eq6_A 209 -------------------------------DPETAALLRRALEKEGI-------------------RVRTKTKAVGYEK 238 (464)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhcCC-------------------EEEcCCEEEEEEE
Confidence 01344556677777786 9999999999988
Q ss_pred cCCceEEEEEeccC--CcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKE--GKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~--g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+.+. ++ |+ ..++.+|.||.|+|..+..
T Consensus 239 ~~~~~~v~~~--~~~~g~--~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 239 KKDGLHVRLE--PAEGGE--GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ETTEEEEEEE--ETTCCS--CEEEEESEEEECSCEEESC
T ss_pred eCCEEEEEEe--ecCCCc--eeEEEcCEEEECCCcccCC
Confidence 7766656554 13 32 2368999999999977654
No 175
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.29 E-value=8.6e-07 Score=89.06 Aligned_cols=40 Identities=35% Similarity=0.505 Sum_probs=36.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
+.++||+|||||++||++|+.|++.|++|+|||+++.+..
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 4578999999999999999999999999999999877643
No 176
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.27 E-value=9.4e-07 Score=90.08 Aligned_cols=62 Identities=24% Similarity=0.383 Sum_probs=47.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCc------------cccc---ChhHHHHHHhhhchHH
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ------------AHFI---NNRYALVFRKLDGLAE 103 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~------------~~~l---~~~~~~~l~~~~gl~~ 103 (455)
...+||+|||||++||++|+.|+++|++|+|||+++.+..+.. +..+ .+...++++++ |+.+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l-gl~~ 87 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSL-GLRE 87 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHT-TCGG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHc-CCcc
Confidence 4568999999999999999999999999999999987643211 1122 25677788888 7754
No 177
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.25 E-value=4.2e-06 Score=84.05 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=76.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. .+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 206 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-------------------SF--------------------- 206 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-------------------hh---------------------
Confidence 46899999999999999999999999999998764310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
+ ..+.+.|.+.+++.|+ +++.+++|++++.
T Consensus 207 ------------------------------~-~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 236 (450)
T 1ges_A 207 ------------------------------D-PMISETLVEVMNAEGP-------------------QLHTNAIPKAVVK 236 (450)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHHSC-------------------EEECSCCEEEEEE
T ss_pred ------------------------------h-HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0 1244456666777786 9999999999987
Q ss_pred cCCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
++++ +.+.+. +|+ ++.+|.||.|+|..+..
T Consensus 237 ~~~~~~~v~~~---~g~----~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 237 NTDGSLTLELE---DGR----SETVDCLIWAIGREPAN 267 (450)
T ss_dssp CTTSCEEEEET---TSC----EEEESEEEECSCEEESC
T ss_pred eCCcEEEEEEC---CCc----EEEcCEEEECCCCCcCC
Confidence 6544 556554 664 78999999999987654
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.25 E-value=1.1e-06 Score=89.33 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=31.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er 74 (455)
.++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 179
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.24 E-value=7.7e-07 Score=88.02 Aligned_cols=38 Identities=24% Similarity=0.381 Sum_probs=35.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~~~ 78 (455)
+.++||+|||||++||++|+.|++. |++|+|||+++.+
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4478999999999999999999999 9999999999765
No 180
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.22 E-value=1.9e-06 Score=87.66 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=33.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+++|||||||+||+.+|..|++.+++|+|||+++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3467899999999999999999999999999999864
No 181
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.21 E-value=1.1e-06 Score=86.50 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=35.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...+||+|||||++|+++|+.|++.|.+|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 45789999999999999999999999999999998765
No 182
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.21 E-value=1.4e-05 Score=80.77 Aligned_cols=105 Identities=19% Similarity=0.357 Sum_probs=77.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 222 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-------------------SM--------------------- 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-------------------SS---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999999865411 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 223 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 252 (478)
T 1v59_A 223 -------------------------------DGEVAKATQKFLKKQGL-------------------DFKLSTKVISAKR 252 (478)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 01344556667777786 9999999999987
Q ss_pred --cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 --TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 --~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+.+....+|+ ..++.+|.||.|.|.....
T Consensus 253 ~~~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 253 NDDKNVVEIVVEDTKTNK--QENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp ETTTTEEEEEEEETTTTE--EEEEEESEEEECSCEEECC
T ss_pred ecCCCeEEEEEEEcCCCC--ceEEECCEEEECCCCCcCC
Confidence 4555555554211222 2378999999999976544
No 183
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.19 E-value=1.1e-06 Score=90.05 Aligned_cols=40 Identities=35% Similarity=0.476 Sum_probs=36.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~~~~~ 80 (455)
+.++||+|||||++||++|+.|+++| ++|+|||+++.+..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 45689999999999999999999999 99999999987643
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.19 E-value=1.5e-05 Score=83.02 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
...+||+||||||||+++|..|++.|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 35689999999999999999999999999999984
No 185
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=1.2e-05 Score=80.82 Aligned_cols=102 Identities=18% Similarity=0.377 Sum_probs=76.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-------------------GF--------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765410 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 210 -------------------------------EKQMAAIIKKRLKKKGV-------------------EVVTNALAKGAEE 239 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 01344456666777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+++.+.+.+. .+|+ ..++.+|.||.|.|....
T Consensus 240 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 240 REDGVTVTYE--ANGE--TKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ETTEEEEEEE--ETTE--EEEEEESEEEECSCEEES
T ss_pred eCCeEEEEEE--eCCc--eeEEEcCEEEECcCCCcc
Confidence 7666656554 1222 237899999999997654
No 186
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.18 E-value=2.3e-06 Score=87.05 Aligned_cols=38 Identities=16% Similarity=0.420 Sum_probs=33.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
+.++||+|||||+||+++|..|++. |.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4568999999999999999999887 8899999998754
No 187
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=1.1e-05 Score=80.85 Aligned_cols=99 Identities=17% Similarity=0.291 Sum_probs=74.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+..+ .+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~----------------------- 189 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV---------------YL----------------------- 189 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------------TC-----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc---------------cC-----------------------
Confidence 4578999999999999999999999999999987643110 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
...+.+.+.+.+++.|+ +++.+++|++++
T Consensus 190 --------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~ 218 (447)
T 1nhp_A 190 --------------------------------DKEFTDVLTEEMEANNI-------------------TIATGETVERYE 218 (447)
T ss_dssp --------------------------------CHHHHHHHHHHHHTTTE-------------------EEEESCCEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEEE
Confidence 02345567777788886 999999999998
Q ss_pred ecCCce-EEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~-~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+ +.+ .+.+ ++. ++.+|.||.|.|....
T Consensus 219 ~~-~~v~~v~~----~~~----~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 219 GD-GRVQKVVT----DKN----AYDADLVVVAVGVRPN 247 (447)
T ss_dssp CS-SBCCEEEE----SSC----EEECSEEEECSCEEES
T ss_pred cc-CcEEEEEE----CCC----EEECCEEEECcCCCCC
Confidence 65 333 2332 343 7899999999997654
No 188
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.17 E-value=1.9e-06 Score=85.66 Aligned_cols=38 Identities=29% Similarity=0.559 Sum_probs=35.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAFS 79 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~~~~ 79 (455)
+++||+|||||++||++|+.|+++| ++|+|||+++.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 5689999999999999999999999 8999999988764
No 189
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.14 E-value=9.3e-06 Score=89.11 Aligned_cols=37 Identities=30% Similarity=0.499 Sum_probs=34.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.++||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998654
No 190
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.13 E-value=2e-06 Score=83.86 Aligned_cols=38 Identities=42% Similarity=0.570 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC-CCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN-KAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~-~~~ 78 (455)
...+||+|||||++||++|+.|+++|++|+|||++ +.+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 45689999999999999999999999999999998 554
No 191
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.13 E-value=2.2e-06 Score=87.05 Aligned_cols=40 Identities=33% Similarity=0.508 Sum_probs=36.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
++++||+|||||++||++|+.|+++|++|+|||+.+.+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 4568999999999999999999999999999999987643
No 192
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.10 E-value=1.5e-05 Score=80.68 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=77.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------~~--------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-------------------GA--------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 225 -------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~ 254 (482)
T 1ojt_A 225 -------------------------------DRDLVKVWQKQNEYRFD-------------------NIMVNTKTVAVEP 254 (482)
T ss_dssp -------------------------------CHHHHHHHHHHHGGGEE-------------------EEECSCEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhcCC-------------------EEEECCEEEEEEE
Confidence 01334456667777786 9999999999987
Q ss_pred cCCceEEEEEeccC----CcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKE----GKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~----g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+++. + |+ ++.+|.||.|.|.....
T Consensus 255 ~~~~~~v~~~---~~~~~g~----~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 255 KEDGVYVTFE---GANAPKE----PQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ETTEEEEEEE---SSSCCSS----CEEESCEEECCCEEECG
T ss_pred cCCeEEEEEe---ccCCCce----EEEcCEEEECcCCCcCC
Confidence 7666666665 4 43 57899999999976543
No 193
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.09 E-value=1.4e-05 Score=80.49 Aligned_cols=101 Identities=19% Similarity=0.246 Sum_probs=75.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.+.. .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------~~~-------------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------QFD-------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TSC--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------ccC--------------------
Confidence 45899999999999999999999999999998764310 000
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 207 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 235 (463)
T 2r9z_A 207 --------------------------------PLLSATLAENMHAQGI-------------------ETHLEFAVAALER 235 (463)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 1223345666677776 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++++.+.+. +|+. ++.+|.||.|.|.....
T Consensus 236 ~~~~~~v~~~---~G~~---~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 236 DAQGTTLVAQ---DGTR---LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ETTEEEEEET---TCCE---EEEESEEEECSCEEESC
T ss_pred eCCeEEEEEe---CCcE---EEEcCEEEECCCCCcCC
Confidence 6666666654 5531 57999999999976543
No 194
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.08 E-value=2.5e-05 Score=77.46 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=80.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 4679999999999999999999999999999876541000
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
....+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 192 ------------------------------~~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 222 (415)
T 3lxd_A 192 ------------------------------AGEALSEFYQAEHRAHGV-------------------DLRTGAAMDCIEG 222 (415)
T ss_dssp ------------------------------SCHHHHHHHHHHHHHTTC-------------------EEEETCCEEEEEE
T ss_pred ------------------------------cCHHHHHHHHHHHHhCCC-------------------EEEECCEEEEEEe
Confidence 012455556777778887 9999999999988
Q ss_pred cCCce-EEEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCC
Q 012845 203 TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGI 245 (455)
Q Consensus 203 ~~~~~-~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~ 245 (455)
+++.+ .+.+. +|+ ++.+|.||.|.|.... +.+..+.
T Consensus 223 ~~~~v~~v~l~---dG~----~i~aD~Vv~a~G~~p~~~l~~~~gl 261 (415)
T 3lxd_A 223 DGTKVTGVRMQ---DGS----VIPADIVIVGIGIVPCVGALISAGA 261 (415)
T ss_dssp SSSBEEEEEES---SSC----EEECSEEEECSCCEESCHHHHHTTC
T ss_pred cCCcEEEEEeC---CCC----EEEcCEEEECCCCccChHHHHhCCC
Confidence 76655 35555 665 7899999999997654 3344443
No 195
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.07 E-value=3e-05 Score=77.95 Aligned_cols=138 Identities=11% Similarity=0.126 Sum_probs=81.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCcc----cccChhHHHHHHhhh-chHHHHHhcCCCcccc
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQA----HFINNRYALVFRKLD-GLAEEIERSQPPVDLW 115 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~~~~~~~----~~l~~~~~~~l~~~~-gl~~~l~~~~~~~~~~ 115 (455)
..+|+|||||.+|+-+|..|++. |.+|++++|.+...+.... ....+...+.+..++ .....+......
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~---- 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN---- 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc----
Confidence 56899999999999999999999 8999999998765332211 122233333333331 111111110000
Q ss_pred cceEEeecCCCCccccccCCCccccccccCCccccccch---hhHHHHHHH-HHHh-cccccccCCCcccccccccccce
Q 012845 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQ---YKLNKLLLK-QLEK-LNFKICTSEGTEGLHNHLLQGRE 190 (455)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r---~~l~~~L~~-~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 190 (455)
.....++- ..+.+.+.+ .+.. .| ++
T Consensus 303 -------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------------v~ 332 (463)
T 3s5w_A 303 -------------------------------TNYSVVDTDLIERIYGVFYRQKVSGIPR-------------------HA 332 (463)
T ss_dssp -------------------------------GTSSCBCHHHHHHHHHHHHHHHHHCCCC-------------------SE
T ss_pred -------------------------------cCCCcCCHHHHHHHHHHHHHHHhcCCCC-------------------eE
Confidence 00000111 122222222 2222 34 49
Q ss_pred EEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCC
Q 012845 191 ILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (455)
Q Consensus 191 i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~ 236 (455)
++.+++|++++.+++.+.+++....+|+ ..++.+|+||.|+|..
T Consensus 333 i~~~~~v~~v~~~~~~~~v~~~~~~~g~--~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 333 FRCMTTVERATATAQGIELALRDAGSGE--LSVETYDAVILATGYE 376 (463)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCC--EEEEEESEEEECCCEE
T ss_pred EEeCCEEEEEEecCCEEEEEEEEcCCCC--eEEEECCEEEEeeCCC
Confidence 9999999999988888878776443443 3468999999999964
No 196
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.07 E-value=4.1e-05 Score=77.22 Aligned_cols=103 Identities=18% Similarity=0.357 Sum_probs=76.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-------------------TL--------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-------------------cC---------------------
Confidence 46899999999999999999999999999998865310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHH-HhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQL-EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
...+.+.+.+.+ ++.|+ +++.+++|++++
T Consensus 214 -------------------------------d~~~~~~l~~~l~~~~gv-------------------~i~~~~~v~~i~ 243 (468)
T 2qae_A 214 -------------------------------DEDVTNALVGALAKNEKM-------------------KFMTSTKVVGGT 243 (468)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTCC-------------------EEECSCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHhhcCCc-------------------EEEeCCEEEEEE
Confidence 013445566667 77786 999999999998
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+++.+.+.+.. .+|+ ..++.+|.||.|.|..+.
T Consensus 244 ~~~~~~~v~~~~-~~g~--~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 244 NNGDSVSLEVEG-KNGK--RETVTCEALLVSVGRRPF 277 (468)
T ss_dssp ECSSSEEEEEEC-C-----EEEEEESEEEECSCEEEC
T ss_pred EcCCeEEEEEEc-CCCc--eEEEECCEEEECCCcccC
Confidence 876666665541 1231 237899999999997664
No 197
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.06 E-value=1.7e-05 Score=78.66 Aligned_cols=108 Identities=25% Similarity=0.399 Sum_probs=80.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.+. ++ .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l---------~~------~~------------------------ 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL---------VR------VL------------------------ 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------HH------HH------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc---------hh------hc------------------------
Confidence 4689999999999999999999999999999876541 00 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 184 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 213 (410)
T 3ef6_A 184 -------------------------------GRRIGAWLRGLLTELGV-------------------QVELGTGVVGFSG 213 (410)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEC
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEec
Confidence 01344556667777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCCC
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGID 246 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~~ 246 (455)
++....+.+. +|+ ++.+|+||.|.|.... +.+.+|..
T Consensus 214 ~~~~~~v~~~---dg~----~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 214 EGQLEQVMAS---DGR----SFVADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp SSSCCEEEET---TSC----EEECSEEEECSCEEECCHHHHHTTCC
T ss_pred cCcEEEEEEC---CCC----EEEcCEEEEeeCCeecHHHHHhCCCc
Confidence 6544456665 665 7899999999997654 34445543
No 198
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.05 E-value=4.4e-05 Score=77.09 Aligned_cols=105 Identities=20% Similarity=0.358 Sum_probs=76.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.++ .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~--------------------- 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------------------GI--------------------- 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS------------------SC---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc------------------cc---------------------
Confidence 468999999999999999999999999999988654210 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 219 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 248 (474)
T 1zmd_A 219 -------------------------------DMEISKNFQRILQKQGF-------------------KFKLNTKVTGATK 248 (474)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCceEEEEEE
Confidence 01344456677777786 9999999999987
Q ss_pred cCCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
++++ +.+.+.....++ ..++.+|.||.|.|....
T Consensus 249 ~~~~~~~v~~~~~~~~~--~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 249 KSDGKIDVSIEAASGGK--AEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CTTSCEEEEEEETTSCC--CEEEEESEEEECSCEEEC
T ss_pred cCCceEEEEEEecCCCC--ceEEEcCEEEECcCCCcC
Confidence 7665 656543111122 237899999999997654
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.05 E-value=2.3e-05 Score=79.36 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=75.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 224 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------------------KF--------------------- 224 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 225 -------------------------------d~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 254 (479)
T 2hqm_A 225 -------------------------------DECIQNTITDHYVKEGI-------------------NVHKLSKIVKVEK 254 (479)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEE
Confidence 01233445666677786 9999999999987
Q ss_pred cCCc--eEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQC--INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~--~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
++++ +.+.+. +|+ .++.+|.||.|.|.....
T Consensus 255 ~~~~~~~~v~~~---~G~---~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 255 NVETDKLKIHMN---DSK---SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CC-CCCEEEEET---TSC---EEEEESEEEECSCEEECC
T ss_pred cCCCcEEEEEEC---CCc---EEEEcCEEEECCCCCCcc
Confidence 6544 456554 552 278999999999976543
No 200
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.05 E-value=2.8e-05 Score=76.85 Aligned_cols=108 Identities=16% Similarity=0.327 Sum_probs=80.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~---------------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV---------------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------------------------------------
Confidence 4679999999999999999999999999999876431000
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
.-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 182 ------------------------------~~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 212 (404)
T 3fg2_P 182 ------------------------------VTPEISSYFHDRHSGAGI-------------------RMHYGVRATEIAA 212 (404)
T ss_dssp ------------------------------SCHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred ------------------------------cCHHHHHHHHHHHHhCCc-------------------EEEECCEEEEEEe
Confidence 012455566777778887 9999999999987
Q ss_pred cCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCCC
Q 012845 203 TDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGID 246 (455)
Q Consensus 203 ~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~~ 246 (455)
+++.+. |.+. +|+ ++.+|.||.|.|.... +.+..|..
T Consensus 213 ~~~~v~~V~~~---dG~----~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 213 EGDRVTGVVLS---DGN----TLPCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp ETTEEEEEEET---TSC----EEECSEEEECCCEEECCHHHHHTTCC
T ss_pred cCCcEEEEEeC---CCC----EEEcCEEEECcCCccCHHHHHhCCCC
Confidence 766543 5554 665 7899999999997543 44445543
No 201
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.05 E-value=4.4e-05 Score=77.13 Aligned_cols=103 Identities=23% Similarity=0.336 Sum_probs=79.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||+.|+-+|..|++.|.+|+++++.+.+.+ .+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~-------------------- 219 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-------------------AV-------------------- 219 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------TS--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-------------------cc--------------------
Confidence 346899999999999999999999999999998764310 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++.|+ +++.+++|++++
T Consensus 220 --------------------------------~~~~~~~l~~~l~~~Gv-------------------~v~~~~~v~~i~ 248 (476)
T 3lad_A 220 --------------------------------DEQVAKEAQKILTKQGL-------------------KILLGARVTGTE 248 (476)
T ss_dssp --------------------------------CHHHHHHHHHHHHHTTE-------------------EEEETCEEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHhCCC-------------------EEEECCEEEEEE
Confidence 01344556667777786 999999999999
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+++.+.+.+. ++.+ ...+.+|.||.|.|....
T Consensus 249 ~~~~~~~v~~~---~~~g-~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 249 VKNKQVTVKFV---DAEG-EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ECSSCEEEEEE---SSSE-EEEEEESEEEECSCEEEC
T ss_pred EcCCEEEEEEE---eCCC-cEEEECCEEEEeeCCccc
Confidence 88777777776 5433 347899999999997543
No 202
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.05 E-value=2.7e-05 Score=77.62 Aligned_cols=108 Identities=13% Similarity=0.269 Sum_probs=78.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... .
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-------------------~--------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER-------------------V--------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-------------------T---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-------------------h---------------------
Confidence 468999999999999999999999999999987543100 0
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
+ -..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 189 -----------------------------~-~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 219 (431)
T 1q1r_A 189 -----------------------------T-APPVSAFYEHLHREAGV-------------------DIRTGTQVCGFEM 219 (431)
T ss_dssp -----------------------------S-CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -----------------------------h-hHHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEe
Confidence 0 01344456667777786 9999999999986
Q ss_pred --cCCce-EEEEEeccCCcceeEEEEeCEEEeecCCCc--hhhhhcCCC
Q 012845 203 --TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGS--TVRKLVGID 246 (455)
Q Consensus 203 --~~~~~-~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S--~vr~~l~~~ 246 (455)
+++.+ .+.+. +|+ ++.+|.||.|.|... .+-+.++..
T Consensus 220 ~~~~~~v~~v~~~---~G~----~i~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 220 STDQQKVTAVLCE---DGT----RLPADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp CTTTCCEEEEEET---TSC----EEECSEEEECCCEEECCHHHHHTTCC
T ss_pred ccCCCcEEEEEeC---CCC----EEEcCEEEECCCCCcCcchhhccCCC
Confidence 44444 35554 564 789999999999654 344445543
No 203
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=2.5e-05 Score=78.77 Aligned_cols=104 Identities=16% Similarity=0.335 Sum_probs=77.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------------------~~--------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-------------------TM--------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998865310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 217 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 217 -------------------------------DAEIRKQFQRSLEKQGM-------------------KFKLKTKVVGVDT 246 (470)
T ss_dssp -------------------------------CHHHHHHHHHHHHHSSC-------------------CEECSEEEEEEEC
T ss_pred -------------------------------cHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEE
Confidence 01344456667777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+++.+.+.+....+|+ ..++.+|.||.|.|....
T Consensus 247 ~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGE--QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp SSSSEEEEEEESSSCC--CEEEEESEEECCCCEEEC
T ss_pred cCCeEEEEEEecCCCc--ceEEECCEEEECCCCCcC
Confidence 6666666654211232 237899999999997654
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.04 E-value=4.7e-05 Score=77.25 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=75.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.. .+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~-------------------- 213 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN-------------------LQ-------------------- 213 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT-------------------CC--------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------------------cC--------------------
Confidence 356899999999999999999999999999998865410 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++. + +++.+++|++++
T Consensus 214 --------------------------------d~~~~~~l~~~l~~~-V-------------------~i~~~~~v~~i~ 241 (492)
T 3ic9_A 214 --------------------------------DEEMKRYAEKTFNEE-F-------------------YFDAKARVISTI 241 (492)
T ss_dssp --------------------------------CHHHHHHHHHHHHTT-S-------------------EEETTCEEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHhhC-c-------------------EEEECCEEEEEE
Confidence 012334445555554 5 899999999999
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+++.+.+.+.. .+| ...++.+|.||.|.|....
T Consensus 242 ~~~~~v~v~~~~-~~G--~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 242 EKEDAVEVIYFD-KSG--QKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ECSSSEEEEEEC-TTC--CEEEEEESEEEECSCCEES
T ss_pred EcCCEEEEEEEe-CCC--ceEEEECCEEEEeeCCccC
Confidence 877777766641 123 2247899999999997543
No 205
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.04 E-value=3.9e-05 Score=77.89 Aligned_cols=105 Identities=20% Similarity=0.363 Sum_probs=79.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~-------------------- 237 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-------------------GM-------------------- 237 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-------------------SS--------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-------------------cC--------------------
Confidence 346899999999999999999999999999998764310 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++.|+ +++.+++|++++
T Consensus 238 --------------------------------d~~~~~~l~~~l~~~gV-------------------~v~~~~~v~~i~ 266 (491)
T 3urh_A 238 --------------------------------DGEVAKQLQRMLTKQGI-------------------DFKLGAKVTGAV 266 (491)
T ss_dssp --------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHhCCC-------------------EEEECCeEEEEE
Confidence 01344456666777776 999999999999
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+++.+.+.+...++|. ..++.+|.||.|.|....
T Consensus 267 ~~~~~~~v~~~~~~~g~--~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 267 KSGDGAKVTFEPVKGGE--ATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp EETTEEEEEEEETTSCC--CEEEEESEEEECCCCEEC
T ss_pred EeCCEEEEEEEecCCCc--eEEEEcCEEEEeeCCccC
Confidence 88877777766222232 247899999999997644
No 206
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=3.2e-05 Score=78.72 Aligned_cols=100 Identities=17% Similarity=0.278 Sum_probs=75.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-+ .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-------------------KF--------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-------------------cc---------------------
Confidence 46899999999999999999999999999998765310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 216 -------------------------------d~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 245 (500)
T 1onf_A 216 -------------------------------DESVINVLENDMKKNNI-------------------NIVTFADVVEIKK 245 (500)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------chhhHHHHHHHHHhCCC-------------------EEEECCEEEEEEE
Confidence 01333446667777786 9999999999987
Q ss_pred cCCc-eEEEEEeccCCcceeEE-EEeCEEEeecCCCchh
Q 012845 203 TDQC-INVIASFLKEGKCTERN-IQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~-~~v~~~~~~~g~~~~~~-~~~d~vV~AdG~~S~v 239 (455)
++++ +.+.+. +|+ + +.+|.||.|.|.....
T Consensus 246 ~~~~~~~v~~~---~g~----~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 246 VSDKNLSIHLS---DGR----IYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp SSTTCEEEEET---TSC----EEEEESEEEECCCBCCTT
T ss_pred cCCceEEEEEC---CCc----EEEECCEEEECCCCCcCC
Confidence 6543 556554 664 4 8999999999976644
No 207
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.02 E-value=5.8e-06 Score=82.61 Aligned_cols=39 Identities=21% Similarity=0.384 Sum_probs=35.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 457899999999999999999999999999999997664
No 208
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.01 E-value=3.6e-05 Score=77.68 Aligned_cols=108 Identities=20% Similarity=0.417 Sum_probs=82.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
..+|+|||||.+|+-+|..|++. |.+|+++|+.+...+. .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-------------------~-------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-------------------F-------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-------------------T--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-------------------c--------------------
Confidence 46899999999999999999999 9999999987543100 0
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
+ -..+.+.|.+.+++.|+ +++.+++|++++
T Consensus 200 ------------------------------~-~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~ 229 (472)
T 3iwa_A 200 ------------------------------T-SKSLSQMLRHDLEKNDV-------------------VVHTGEKVVRLE 229 (472)
T ss_dssp ------------------------------S-CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEE
T ss_pred ------------------------------c-CHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEE
Confidence 0 12455567777778886 999999999998
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCCC
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGID 246 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~~ 246 (455)
.+++.+.+.+. +|+ ++.+|.||.|.|.... +.+.+|..
T Consensus 230 ~~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 230 GENGKVARVIT---DKR----TLDADLVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp ESSSBEEEEEE---SSC----EEECSEEEECSCEEECCHHHHHHTCC
T ss_pred ccCCeEEEEEe---CCC----EEEcCEEEECCCCCcCHHHHHhCCcc
Confidence 86777777666 665 7899999999998543 44444543
No 209
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.01 E-value=6.7e-06 Score=84.86 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=34.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~~ 77 (455)
...||+||||||.||+.+|..|++.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999997 79999999876
No 210
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.01 E-value=1.4e-05 Score=78.86 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=30.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~~ 77 (455)
.+|||||||+||+++|..|++.+ .+|+|||+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 47999999999999999998876 58999998764
No 211
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.00 E-value=4.3e-05 Score=77.71 Aligned_cols=101 Identities=16% Similarity=0.213 Sum_probs=77.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||..|+-+|..|++.|.+|+++|+.+.+.+ .+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~-------------------- 221 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-------------------YE-------------------- 221 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-------------------CS--------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------cc--------------------
Confidence 346899999999999999999999999999998765310 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++.|+ +|+.+++|++++
T Consensus 222 --------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~V~~i~ 250 (499)
T 1xdi_A 222 --------------------------------DADAALVLEESFAERGV-------------------RLFKNARAASVT 250 (499)
T ss_dssp --------------------------------SHHHHHHHHHHHHHTTC-------------------EEETTCCEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEE
Confidence 01344556667778786 999999999998
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
.+++++.+... +|. ++.+|.||.|.|.....
T Consensus 251 ~~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 251 RTGAGVLVTMT---DGR----TVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ECSSSEEEEET---TSC----EEEESEEEECCCEEECC
T ss_pred EeCCEEEEEEC---CCc----EEEcCEEEECCCCCcCC
Confidence 87666655543 554 78999999999987643
No 212
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.00 E-value=2.6e-05 Score=79.88 Aligned_cols=101 Identities=19% Similarity=0.150 Sum_probs=78.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEE
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~ 120 (455)
..+.+++|||||..|+=+|..|++.|.+|+|+++.... +++.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------~~~D------------------ 262 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------RGFD------------------ 262 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------TTSC------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------cccc------------------
Confidence 44578999999999999999999999999999874321 0110
Q ss_pred eecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEe
Q 012845 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (455)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i 200 (455)
.++.+.+.+.+++.|+ .++.+..+..+
T Consensus 263 ----------------------------------~ei~~~l~~~l~~~gi-------------------~~~~~~~v~~~ 289 (542)
T 4b1b_A 263 ----------------------------------QQCAVKVKLYMEEQGV-------------------MFKNGILPKKL 289 (542)
T ss_dssp ----------------------------------HHHHHHHHHHHHHTTC-------------------EEEETCCEEEE
T ss_pred ----------------------------------hhHHHHHHHHHHhhcc-------------------eeecceEEEEE
Confidence 1344556777788886 99999999999
Q ss_pred eecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 201 ~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+..++.+.+.+. ++. .+.+|.|+.|.|+.-.+
T Consensus 290 ~~~~~~~~v~~~---~~~----~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 290 TKMDDKILVEFS---DKT----SELYDTVLYAIGRKGDI 321 (542)
T ss_dssp EEETTEEEEEET---TSC----EEEESEEEECSCEEESC
T ss_pred EecCCeEEEEEc---CCC----eEEEEEEEEcccccCCc
Confidence 998888777765 554 67899999999975443
No 213
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.99 E-value=5.2e-06 Score=84.18 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=34.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~~~ 78 (455)
++.+||+|||||++||++|+.|+++| .+|+|||+++.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 35689999999999999999999998 799999999765
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=1.8e-05 Score=79.69 Aligned_cols=99 Identities=21% Similarity=0.324 Sum_probs=72.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 210 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-------------------TY--------------------- 210 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999999865310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 211 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 211 -------------------------------DSELTAPVAESLKKLGI-------------------ALHLGHSVEGYEN 240 (458)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEETTCEEEEEET
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEECCEEEEEEe
Confidence 01233445666677786 9999999999986
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
++ +.+. .++|+ ..++.+|.||.|.|....
T Consensus 241 -~~-v~v~---~~~G~--~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 241 -GC-LLAN---DGKGG--QLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp -TE-EEEE---CSSSC--CCEECCSCEEECCCEEEC
T ss_pred -CC-EEEE---ECCCc--eEEEECCEEEECcCCCcC
Confidence 33 4343 12342 127899999999997654
No 215
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.98 E-value=4.7e-06 Score=81.37 Aligned_cols=36 Identities=36% Similarity=0.442 Sum_probs=33.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
+||+|||||++|+++|+.|++.|.+|+|+|+++.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999987653
No 216
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.98 E-value=3.9e-05 Score=75.89 Aligned_cols=104 Identities=16% Similarity=0.303 Sum_probs=76.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+..+ .+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~--------------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR------------------AA--------------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc------------------cc---------------------
Confidence 468999999999999999999999999999988643100 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++
T Consensus 186 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~- 214 (408)
T 2gqw_A 186 -------------------------------PATLADFVARYHAAQGV-------------------DLRFERSVTGSV- 214 (408)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEE-
T ss_pred -------------------------------CHHHHHHHHHHHHHcCc-------------------EEEeCCEEEEEE-
Confidence 01344456667777786 999999999998
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCCC
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGID 246 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~~ 246 (455)
+ + .+++. +|+ ++.+|.||.|.|.... +-+..+..
T Consensus 215 ~-~--~v~~~---~g~----~i~~D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 215 D-G--VVLLD---DGT----RIAADMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp T-T--EEEET---TSC----EEECSEEEECSCEEECCHHHHHHTCC
T ss_pred C-C--EEEEC---CCC----EEEcCEEEECcCCCccHHHHHhCCCC
Confidence 3 3 45554 664 7899999999996543 34444543
No 217
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.97 E-value=7.3e-05 Score=75.25 Aligned_cols=102 Identities=20% Similarity=0.353 Sum_probs=76.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 210 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-------------------NE--------------------- 210 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998865310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 211 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 211 -------------------------------DADVSKEIEKQFKKLGV-------------------TILTATKVESIAD 240 (464)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHcCC-------------------EEEeCcEEEEEEE
Confidence 01233446666677786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+++.+.+.+. ++|+ ..++.+|.||.|.|....
T Consensus 241 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 241 GGSQVTVTVT--KDGV--AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp CSSCEEEEEE--SSSC--EEEEEESEEEECSCEEEC
T ss_pred cCCeEEEEEE--cCCc--eEEEEcCEEEECCCCCcc
Confidence 6666655553 2342 237899999999997653
No 218
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.97 E-value=4.7e-06 Score=81.88 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=34.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
++||+|||||++|+++|+.|++.|++|+|||+++.+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999987653
No 219
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.96 E-value=6.1e-06 Score=82.78 Aligned_cols=40 Identities=33% Similarity=0.453 Sum_probs=36.6
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
|+..+||+|||+|++|+++|+.|++.|.+|+|+||++...
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 3567999999999999999999999999999999998664
No 220
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.96 E-value=8.2e-05 Score=70.60 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=73.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~---------------------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------E---------------------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------C----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------C----------------------------------
Confidence 46899999999999999999999999999998754310 0
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
..+.+.+.+.+++.|+ +++.+++|+++..
T Consensus 184 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 212 (320)
T 1trb_A 184 --------------------------------KILIKRLMDKVENGNI-------------------ILHTNRTLEEVTG 212 (320)
T ss_dssp --------------------------------HHHHHHHHHHHHTSSE-------------------EEECSCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHhcccCCe-------------------EEEcCceeEEEEc
Confidence 1223335556667776 9999999999987
Q ss_pred cCCceE-EEEEeccC-CcceeEEEEeCEEEeecCCCc
Q 012845 203 TDQCIN-VIASFLKE-GKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 203 ~~~~~~-v~~~~~~~-g~~~~~~~~~d~vV~AdG~~S 237 (455)
+++.+. +.+....+ |+ ..++.+|.||.|.|...
T Consensus 213 ~~~~v~~v~~~~~~~~g~--~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 213 DQMGVTGVRLRDTQNSDN--IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp CSSSEEEEEEECCTTCCC--CEEEECSEEEECSCEEE
T ss_pred CCCceEEEEEEeccCCCc--eEEEEcCEEEEEeCCCC
Confidence 665543 55551111 32 24789999999999643
No 221
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.96 E-value=4.9e-06 Score=83.54 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
+.++||+|||||++|+++|+.|++.|++|+|||+.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 35689999999999999999999999999999997
No 222
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.95 E-value=9.2e-05 Score=74.81 Aligned_cols=103 Identities=18% Similarity=0.225 Sum_probs=74.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+++.+.+-. .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-------------------SF--------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998764310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 227 -------------------------------d~~~~~~~~~~l~~~gv-------------------~i~~~~~v~~i~~ 256 (478)
T 3dk9_A 227 -------------------------------DSMISTNCTEELENAGV-------------------EVLKFSQVKEVKK 256 (478)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEETTEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 01234456666777786 9999999999987
Q ss_pred cCCc--eEEEEEeccCCcce--eEEEEeCEEEeecCCCc
Q 012845 203 TDQC--INVIASFLKEGKCT--ERNIQCNILIGTDGAGS 237 (455)
Q Consensus 203 ~~~~--~~v~~~~~~~g~~~--~~~~~~d~vV~AdG~~S 237 (455)
.+++ +.+.+. +.+++. ..++.+|.||.|.|...
T Consensus 257 ~~~~~~~~v~~~--~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 257 TLSGLEVSMVTA--VPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp CSSSEEEEEEEC--CTTSCCEEEEEEEESEEEECSCEEE
T ss_pred cCCCcEEEEEEc--cCCCCcccceEEEcCEEEEeecccc
Confidence 6665 444443 222121 14789999999999654
No 223
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.94 E-value=5.7e-05 Score=75.79 Aligned_cols=100 Identities=17% Similarity=0.291 Sum_probs=74.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~--------------------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK------------------YF--------------------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT------------------TS---------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh------------------hh---------------------
Confidence 468999999999999999999999999999987643110 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 190 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 219 (452)
T 2cdu_A 190 -------------------------------DKEFTDILAKDYEAHGV-------------------NLVLGSKVAAFEE 219 (452)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESSCEEEEEE
T ss_pred -------------------------------hhhHHHHHHHHHHHCCC-------------------EEEcCCeeEEEEc
Confidence 01344556677778886 9999999999986
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.++.+..... +|. ++.+|.||.|.|....
T Consensus 220 ~~~~v~~v~~---~g~----~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 220 VDDEIITKTL---DGK----EIKSDIAILCIGFRPN 248 (452)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECCCEEEC
T ss_pred CCCeEEEEEe---CCC----EEECCEEEECcCCCCC
Confidence 5555432222 443 7899999999997654
No 224
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.93 E-value=3.5e-05 Score=78.19 Aligned_cols=100 Identities=15% Similarity=0.214 Sum_probs=76.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~---g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+-+ .+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------~~------------------ 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-------------------GF------------------ 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-------------------TS------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-------------------cc------------------
Confidence 46899999999999999999999 999999998864310 00
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
-..+.+.|.+.+++.|+ +|+.+++|++
T Consensus 230 ----------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 256 (490)
T 1fec_A 230 ----------------------------------DSELRKQLTEQLRANGI-------------------NVRTHENPAK 256 (490)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHTTE-------------------EEEETCCEEE
T ss_pred ----------------------------------CHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 01344556677777786 9999999999
Q ss_pred eeecCCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 200 i~~~~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
++.++++ +.+.+. +|+ ++.+|.||.|.|.....
T Consensus 257 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 257 VTKNADGTRHVVFE---SGA----EADYDVVMLAIGRVPRS 290 (490)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEESC
T ss_pred EEEcCCCEEEEEEC---CCc----EEEcCEEEEccCCCcCc
Confidence 9876543 556554 664 78999999999976543
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.93 E-value=6.4e-05 Score=75.40 Aligned_cols=98 Identities=22% Similarity=0.277 Sum_probs=75.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.+.. ..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------KY--------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------TT---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------cc---------------------
Confidence 46899999999999999999999999999998765310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
+ -..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 187 -----------------------------~-d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 217 (452)
T 3oc4_A 187 -----------------------------F-DKEMVAEVQKSLEKQAV-------------------IFHFEETVLGIEE 217 (452)
T ss_dssp -----------------------------C-CHHHHHHHHHHHHTTTE-------------------EEEETCCEEEEEE
T ss_pred -----------------------------C-CHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEc
Confidence 0 01345556777777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
.++.+.+.+. ++ ++.+|.||.|.|...
T Consensus 218 ~~~~v~v~~~---~g-----~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 218 TANGIVLETS---EQ-----EISCDSGIFALNLHP 244 (452)
T ss_dssp CSSCEEEEES---SC-----EEEESEEEECSCCBC
T ss_pred cCCeEEEEEC---CC-----EEEeCEEEECcCCCC
Confidence 6666655443 43 679999999999754
No 226
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.92 E-value=5.2e-05 Score=77.01 Aligned_cols=100 Identities=20% Similarity=0.266 Sum_probs=76.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceE
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~---g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~ 119 (455)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.+-+ .+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------~~------------------ 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------------------GF------------------ 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------------------TS------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------------------cc------------------
Confidence 46899999999999999999999 999999998765310 00
Q ss_pred EeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEE
Q 012845 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (455)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 199 (455)
-..+.+.|.+.+++.|+ +++.+++|++
T Consensus 234 ----------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 260 (495)
T 2wpf_A 234 ----------------------------------DETIREEVTKQLTANGI-------------------EIMTNENPAK 260 (495)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESCCEEE
T ss_pred ----------------------------------CHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 01234456666777786 9999999999
Q ss_pred eeecCCc-eEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 200 i~~~~~~-~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
++.++++ +.+.+. +|+ ++.+|.||.|.|.....
T Consensus 261 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 261 VSLNTDGSKHVTFE---SGK----TLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred EEEcCCceEEEEEC---CCc----EEEcCEEEECCCCcccc
Confidence 9876543 556554 664 78999999999976543
No 227
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.92 E-value=5.9e-05 Score=77.91 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.+|+|||||..|+-+|..|++.|.+|+++|+.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 48999999999999999999999999999987643
No 228
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.92 E-value=5.3e-05 Score=76.33 Aligned_cols=98 Identities=17% Similarity=0.266 Sum_probs=74.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-+ +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~---------------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------ED---------------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------SC----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------CC----------------------------------
Confidence 46899999999999999999999999999998764310 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 216 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 244 (467)
T 1zk7_A 216 --------------------------------PAIGEAVTAAFRAEGI-------------------EVLEHTQASQVAH 244 (467)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEETTCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEcCCEEEEEEE
Confidence 1334456666777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
+++.+.+.+ ++. ++.+|.||.|.|.....
T Consensus 245 ~~~~~~v~~----~~~----~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 245 MDGEFVLTT----THG----ELRADKLLVATGRTPNT 273 (467)
T ss_dssp ETTEEEEEE----TTE----EEEESEEEECSCEEESC
T ss_pred eCCEEEEEE----CCc----EEEcCEEEECCCCCcCC
Confidence 665544443 232 78999999999987653
No 229
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.92 E-value=7.8e-06 Score=82.12 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=34.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4579999999999999999999999999999998754
No 230
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.90 E-value=6.9e-06 Score=83.54 Aligned_cols=40 Identities=33% Similarity=0.410 Sum_probs=35.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
...+||+|||||++||++|+.|++.|++|+|+|+++.+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 3467999999999999999999999999999999876643
No 231
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.89 E-value=4.3e-05 Score=77.34 Aligned_cols=99 Identities=19% Similarity=0.388 Sum_probs=73.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------~~----------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT----------------IY----------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS----------------SS-----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh----------------cC-----------------------
Confidence 356899999999999999999999999999998754310 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++.|+ +++.+++|++++
T Consensus 226 --------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~ 254 (480)
T 3cgb_A 226 --------------------------------DGDMAEYIYKEADKHHI-------------------EILTNENVKAFK 254 (480)
T ss_dssp --------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHHcCc-------------------EEEcCCEEEEEE
Confidence 01344556777778886 999999999998
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
.+ +.+..... ++. ++.+|.||.|.|....
T Consensus 255 ~~-~~v~~v~~---~~~----~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 255 GN-ERVEAVET---DKG----TYKADLVLVSVGVKPN 283 (480)
T ss_dssp ES-SBEEEEEE---TTE----EEECSEEEECSCEEES
T ss_pred cC-CcEEEEEE---CCC----EEEcCEEEECcCCCcC
Confidence 65 33322222 332 6899999999997653
No 232
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.86 E-value=8.1e-05 Score=75.49 Aligned_cols=99 Identities=17% Similarity=0.319 Sum_probs=73.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~-------------------- 234 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG------------------YY-------------------- 234 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------TS--------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh------------------HH--------------------
Confidence 3468999999999999999999999999999987643110 00
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
-..+.+.+.+.+++.|+ +++.+++|++++
T Consensus 235 --------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~ 263 (490)
T 2bc0_A 235 --------------------------------DRDLTDLMAKNMEEHGI-------------------QLAFGETVKEVA 263 (490)
T ss_dssp --------------------------------CHHHHHHHHHHHHTTTC-------------------EEEETCCEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEE
Confidence 01344556677778786 999999999998
Q ss_pred ecCCceE-EEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 202 ATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 202 ~~~~~~~-v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
. ++.+. +.+ +|. ++.+|.||.|.|....
T Consensus 264 ~-~~~v~~v~~----~g~----~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 264 G-NGKVEKIIT----DKN----EYDVDMVILAVGFRPN 292 (490)
T ss_dssp C-SSSCCEEEE----SSC----EEECSEEEECCCEEEC
T ss_pred c-CCcEEEEEE----CCc----EEECCEEEECCCCCcC
Confidence 6 33332 332 443 7899999999996543
No 233
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.82 E-value=9.9e-05 Score=74.89 Aligned_cols=107 Identities=17% Similarity=0.291 Sum_probs=77.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHh----CCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccce
Q 012845 43 VVPVLIVGAGPVGLVLSILLTK----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~----~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~ 118 (455)
..+|+|||||..|+-+|..|++ .|.+|+++++.+.+..+ +
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-------------------~----------------- 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-------------------I----------------- 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT-------------------T-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc-------------------c-----------------
Confidence 4689999999999999999987 47899999876432100 0
Q ss_pred EEeecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEE
Q 012845 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (455)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~ 198 (455)
++ ..+.+.+.+.+++.|+ +++.+++|+
T Consensus 224 ---------------------------------l~-~~~~~~~~~~l~~~GV-------------------~v~~~~~V~ 250 (493)
T 1m6i_A 224 ---------------------------------LP-EYLSNWTMEKVRREGV-------------------KVMPNAIVQ 250 (493)
T ss_dssp ---------------------------------SC-HHHHHHHHHHHHTTTC-------------------EEECSCCEE
T ss_pred ---------------------------------CC-HHHHHHHHHHHHhcCC-------------------EEEeCCEEE
Confidence 00 1344456667778786 999999999
Q ss_pred EeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch--hhhhcCC
Q 012845 199 SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGI 245 (455)
Q Consensus 199 ~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~--vr~~l~~ 245 (455)
+++.+++.+.+.+. +|+ ++.+|+||.|.|.... +.+..|.
T Consensus 251 ~i~~~~~~~~v~l~---dG~----~i~aD~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 251 SVGVSSGKLLIKLK---DGR----KVETDHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp EEEEETTEEEEEET---TSC----EEEESEEEECCCEEECCTTHHHHTC
T ss_pred EEEecCCeEEEEEC---CCC----EEECCEEEECCCCCccHHHHHHcCC
Confidence 99876666556655 664 7899999999997643 3444444
No 234
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.81 E-value=0.00014 Score=73.46 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=74.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||..|+-+|..|++.|.+|+|+++.... +.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------~~~--------------------- 225 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------RGF--------------------- 225 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------TTS---------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------ccc---------------------
Confidence 457999999999999999999999999999974211 011
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 226 -------------------------------d~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 255 (483)
T 3dgh_A 226 -------------------------------DQQMAELVAASMEERGI-------------------PFLRKTVPLSVEK 255 (483)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------CEEETEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEEEE
Confidence 01344456667777786 9999999999987
Q ss_pred cCC-ceEEEEEeccCCc-ceeEEEEeCEEEeecCCCc
Q 012845 203 TDQ-CINVIASFLKEGK-CTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 203 ~~~-~~~v~~~~~~~g~-~~~~~~~~d~vV~AdG~~S 237 (455)
.++ .+.+++. ++. +...++.+|.||.|.|...
T Consensus 256 ~~~~~~~v~~~---~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 256 QDDGKLLVKYK---NVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp CTTSCEEEEEE---ETTTCCEEEEEESEEEECSCEEE
T ss_pred cCCCcEEEEEe---cCCCCceeEEEcCEEEECccccc
Confidence 544 4556665 332 3344789999999999754
No 235
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.80 E-value=0.00022 Score=72.18 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=74.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||||..|+-+|..|++.|.+|+|+++.... +.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------~~~d------------------- 224 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------RGFD------------------- 224 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------TTSC-------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------ccCC-------------------
Confidence 3457999999999999999999999999999975311 0110
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
..+.+.+.+.+++.|+ +++.++++.++.
T Consensus 225 ---------------------------------~~~~~~l~~~l~~~gv-------------------~~~~~~~v~~i~ 252 (488)
T 3dgz_A 225 ---------------------------------QQMSSLVTEHMESHGT-------------------QFLKGCVPSHIK 252 (488)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEE
T ss_pred ---------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEE
Confidence 1244456666777786 999999999998
Q ss_pred ec-CCceEEEEEeccCCcceeEEEEeCEEEeecCCCc
Q 012845 202 AT-DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (455)
Q Consensus 202 ~~-~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S 237 (455)
.. ++.+.+.+...++| ...++.+|.||.|.|...
T Consensus 253 ~~~~~~~~v~~~~~~~g--~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 253 KLPTNQLQVTWEDHASG--KEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp ECTTSCEEEEEEETTTT--EEEEEEESEEEECSCEEE
T ss_pred EcCCCcEEEEEEeCCCC--eeEEEECCEEEEcccCCc
Confidence 74 34455666522223 233578999999999654
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.75 E-value=0.0002 Score=68.36 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 467999999999999999999999999999987643
No 237
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.74 E-value=2.3e-05 Score=79.07 Aligned_cols=38 Identities=29% Similarity=0.421 Sum_probs=33.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFS 79 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~~~ 79 (455)
..+||+|||||++|+++|+.|++.|+ +|+|||+.+.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 46899999999999999999999999 899999987654
No 238
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.73 E-value=0.00022 Score=68.12 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 46899999999999999999999999999998754
No 239
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=0.00013 Score=71.13 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=32.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 68999999999999999999999999999988653
No 240
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00018 Score=69.63 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 45899999999999999999999999999998764
No 241
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.67 E-value=3.2e-05 Score=79.65 Aligned_cols=37 Identities=32% Similarity=0.473 Sum_probs=34.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|++|||+|++|+.+|..|++.|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5699999999999999999999999999999998754
No 242
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.66 E-value=0.00024 Score=71.42 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=75.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-------------------~~--------------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-------------------RF--------------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 56899999999999999999999999999998764210 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
-..+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 239 (463)
T 4dna_A 210 -------------------------------DQDMRRGLHAAMEEKGI-------------------RILCEDIIQSVSA 239 (463)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEE
Confidence 01345556777788887 9999999999988
Q ss_pred cCCc-eEEE-EEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQC-INVI-ASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~-~~v~-~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
++++ +.+. +. +| .+.+|.||.|.|....
T Consensus 240 ~~~~~~~v~~~~---~g-----~i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 240 DADGRRVATTMK---HG-----EIVADQVMLALGRMPN 269 (463)
T ss_dssp CTTSCEEEEESS---SC-----EEEESEEEECSCEEES
T ss_pred cCCCEEEEEEcC---CC-----eEEeCEEEEeeCcccC
Confidence 7555 4454 33 55 2789999999997654
No 243
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.65 E-value=3.2e-05 Score=82.42 Aligned_cols=38 Identities=29% Similarity=0.428 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...+||+||||||||+++|+.|+++|++|+|||+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998764
No 244
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.64 E-value=3.2e-05 Score=79.11 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=32.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er~~~ 77 (455)
..||+||||||+||+.+|..|++ .|++|+|||+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 47999999999999999999998 5899999999865
No 245
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.63 E-value=0.00025 Score=73.56 Aligned_cols=97 Identities=16% Similarity=0.306 Sum_probs=73.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+...+ .+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-------------------PI--------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-------------------cC---------------------
Confidence 46899999999999999999999999999998764311 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~ 202 (455)
...+.+.+.+.+++.|+ +++.+++|++++.
T Consensus 227 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 256 (588)
T 3ics_A 227 -------------------------------DYEMAAYVHEHMKNHDV-------------------ELVFEDGVDALEE 256 (588)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEG
T ss_pred -------------------------------CHHHHHHHHHHHHHcCC-------------------EEEECCeEEEEec
Confidence 01334456666777786 9999999999987
Q ss_pred cCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 203 ~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+++. +.+. +|+ ++.+|.||.|.|....
T Consensus 257 ~~~~--v~~~---~g~----~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 257 NGAV--VRLK---SGS----VIQTDMLILAIGVQPE 283 (588)
T ss_dssp GGTE--EEET---TSC----EEECSEEEECSCEEEC
T ss_pred CCCE--EEEC---CCC----EEEcCEEEEccCCCCC
Confidence 6553 4444 664 7899999999997543
No 246
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.62 E-value=2.4e-05 Score=78.55 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=33.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHh-C------CCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTK-L------GIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~-~------g~~V~l~Er~~~~ 78 (455)
.++||+||||||||+++|..|++ . |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 35799999999999999999999 7 9999999998654
No 247
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.60 E-value=0.00028 Score=68.28 Aligned_cols=105 Identities=10% Similarity=0.128 Sum_probs=70.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEee
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~~ 122 (455)
..+|+|||||.+|+-+|..|++.|.+|+++++.+..... .+ . +.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------~~---d--------~~---------- 209 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------DA---D--------PS---------- 209 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CT----------
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------CC---C--------CC----------
Confidence 347999999999999999999999999999987543100 00 0 00
Q ss_pred cCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcc-cccccCCCcccccccccccceEEeccEEEEee
Q 012845 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLN-FKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
..+ ...+.+.+.+.+++.| + +++.+++|++++
T Consensus 210 ---------------------------~~~-~~~~~~~l~~~l~~~g~v-------------------~~~~~~~v~~i~ 242 (369)
T 3d1c_A 210 ---------------------------VRL-SPYTRQRLGNVIKQGARI-------------------EMNVHYTVKDID 242 (369)
T ss_dssp ---------------------------TSC-CHHHHHHHHHHHHTTCCE-------------------EEECSCCEEEEE
T ss_pred ---------------------------ccC-CHHHHHHHHHHHhhCCcE-------------------EEecCcEEEEEE
Confidence 000 1234455666666665 6 899999999997
Q ss_pred ecCCceEEEEEeccCCcceeEEE-EeCEEEeecCCCc
Q 012845 202 ATDQCINVIASFLKEGKCTERNI-QCNILIGTDGAGS 237 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~-~~d~vV~AdG~~S 237 (455)
.+++.+.+.+. +|+ .+ .+|.||.|.|...
T Consensus 243 ~~~~~~~v~~~---~g~----~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 243 FNNGQYHISFD---SGQ----SVHTPHEPILATGFDA 272 (369)
T ss_dssp EETTEEEEEES---SSC----CEEESSCCEECCCBCG
T ss_pred ecCCceEEEec---CCe----EeccCCceEEeeccCC
Confidence 66666556655 664 34 4699999999654
No 248
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.60 E-value=0.00044 Score=65.18 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998754
No 249
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.60 E-value=0.00065 Score=64.00 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 46899999999999999999999999999998754
No 250
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.60 E-value=0.00051 Score=70.09 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
..+|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 457999999999999999999999999999974
No 251
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.60 E-value=4.3e-05 Score=80.47 Aligned_cols=38 Identities=26% Similarity=0.475 Sum_probs=35.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
..+||+|||||++|+++|+.|++.|++|+|||+.+.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 46799999999999999999999999999999987654
No 252
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.59 E-value=5.1e-05 Score=81.60 Aligned_cols=38 Identities=26% Similarity=0.475 Sum_probs=35.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
..++|+|||||++||++|+.|++.|++|+|||+.+.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 45799999999999999999999999999999988764
No 253
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.59 E-value=8e-05 Score=77.21 Aligned_cols=38 Identities=32% Similarity=0.336 Sum_probs=34.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er~~~~ 78 (455)
+..+|++|||+|++|+.+|..|++ .|.+|+|+|+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 79999999998754
No 254
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.58 E-value=0.00032 Score=70.18 Aligned_cols=34 Identities=18% Similarity=0.435 Sum_probs=31.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 5899999999999999999999999999998764
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.57 E-value=0.0002 Score=71.39 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 347999999999999999999999999999987653
No 256
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.57 E-value=4.6e-05 Score=80.43 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=34.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...+||+|||||+||+.+|..|++.|++|+|||+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999998764
No 257
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.56 E-value=0.00069 Score=69.42 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=41.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHH
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~ 96 (455)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+..-.......+.+.....|+
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 3568999999999999999999999999999999863111223345555556665
No 258
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.55 E-value=3.2e-05 Score=79.31 Aligned_cols=37 Identities=32% Similarity=0.395 Sum_probs=34.0
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...+|+||||||+||+.+|..|++ |.+|+|+|+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356999999999999999999999 9999999998754
No 259
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.51 E-value=7.1e-05 Score=82.70 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=33.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~~ 78 (455)
..+||+||||||||+++|..|++.|+ +|+|||+.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 46899999999999999999999999 79999997654
No 260
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.48 E-value=0.00089 Score=63.40 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=31.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 46899999999999999999999999999998653
No 261
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.48 E-value=0.00052 Score=68.99 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||||+.|+-+|..|++.|.+|+|+++.+..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 468999999999999999999999999999987654
No 262
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.47 E-value=6.5e-05 Score=75.52 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=33.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~~~ 78 (455)
..+||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 4579999999999999999999998 999999998754
No 263
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.45 E-value=0.0012 Score=68.56 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
..+|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999986
No 264
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.43 E-value=0.0014 Score=62.16 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999998754
No 265
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.42 E-value=0.00035 Score=71.71 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=41.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHH
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~ 96 (455)
...+|+|||+|.+|+-+|..|++.+.+|+|++|.+..-.......+.+.....|+
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 238 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLR 238 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHH
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHH
Confidence 4568999999999999999999999999999999863221222334555555554
No 266
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.41 E-value=0.0011 Score=62.33 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999998754
No 267
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.40 E-value=0.00013 Score=75.32 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=33.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~ 76 (455)
...||+||||||.||+.+|..|++. +.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4579999999999999999999975 89999999987
No 268
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.38 E-value=0.001 Score=63.33 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 468999999999999999999999999999987643
No 269
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.35 E-value=9.2e-05 Score=77.65 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC--------CCEEEEcCCC-CC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG--------IKCSVLEKNK-AF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g--------~~V~l~Er~~-~~ 78 (455)
..++|+|||||++||++|+.|++.| ++|+|||+++ ..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 3578999999999999999999998 9999999987 55
No 270
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.33 E-value=0.0012 Score=63.06 Aligned_cols=35 Identities=11% Similarity=0.330 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 46899999999999999999999999999998754
No 271
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.32 E-value=0.00017 Score=73.32 Aligned_cols=37 Identities=24% Similarity=0.468 Sum_probs=34.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.++|++|||+|++|+.+|..|++.|.+|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998743
No 272
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.31 E-value=0.00022 Score=73.32 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=34.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~~~ 78 (455)
..+|++|||+|++|+.+|..|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 579999999999999999999998 9999999998654
No 273
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.29 E-value=0.0012 Score=62.50 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 46899999999999999999999999999998754
No 274
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.29 E-value=0.0002 Score=72.85 Aligned_cols=38 Identities=32% Similarity=0.586 Sum_probs=34.8
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..++|++|||+|++|+.+|..|++.|.+|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35799999999999999999999999999999998643
No 275
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.24 E-value=0.00038 Score=72.09 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=37.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~ 80 (455)
.++|||+|||+|+.|+.+|..|++.|.+|+++||++....
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 4579999999999999999999999999999999998753
No 276
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.23 E-value=0.00013 Score=74.99 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=33.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er~~~~ 78 (455)
.||+||||||+||+.+|..|++ .|.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 69999999998654
No 277
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.21 E-value=0.0025 Score=60.10 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 468999999999999999999999999999987543
No 278
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.20 E-value=0.0028 Score=63.49 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=30.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--------------------CC-CEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL--------------------GI-KCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~--------------------g~-~V~l~Er~~~~ 78 (455)
..+|+|||+|.+|+-+|..|++. |. +|+|++|+...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 45799999999999999999974 65 89999998654
No 279
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.17 E-value=0.0048 Score=61.81 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.5
Q ss_pred ccCEEEECCCHHHHHHHHHHH--------------------hCCC-CEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLT--------------------KLGI-KCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La--------------------~~g~-~V~l~Er~~~~ 78 (455)
..+|+|||+|..|+-+|..|+ +.|. +|+|++|+...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 468999999999999999999 6788 69999998654
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.08 E-value=0.003 Score=64.33 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998754
No 281
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.04 E-value=0.00053 Score=70.40 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=39.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHH
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~ 96 (455)
...+|+|||+|.+|+-+|..|++.+.+|++++|.+..-.......+++.....++
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~ 244 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQK 244 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHH
Confidence 4568999999999999999999999999999999863111122334555555555
No 282
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.94 E-value=0.0016 Score=60.68 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=30.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998654
No 283
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.61 E-value=0.017 Score=54.17 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||||..|+-+|..|++.|.+|+|+||...
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 36799999999999999999999999999998654
No 284
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.51 E-value=0.0028 Score=61.99 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=34.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 4689999999999999999999999999999988764
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.48 E-value=0.0067 Score=64.43 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=31.6
Q ss_pred ccCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVG--gG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 35899998 99999999999999999999999876
No 286
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.47 E-value=0.0089 Score=65.51 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 5899999999999999999999999999998754
No 287
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.33 E-value=0.0031 Score=52.97 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46799999999999999999999999999998754
No 288
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.33 E-value=0.005 Score=50.69 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=32.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+-.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 456899999999999999999999999999998753
No 289
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.29 E-value=0.0033 Score=59.17 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||+|..|..+|..|+++|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999874
No 290
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.27 E-value=0.016 Score=60.90 Aligned_cols=28 Identities=29% Similarity=0.439 Sum_probs=25.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEE
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCS 70 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~ 70 (455)
..+|+|||||..|+-+|..|++.|.+|+
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 4689999999999999999999987664
No 291
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.23 E-value=0.0054 Score=51.30 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34679999999999999999999999999999864
No 292
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.11 E-value=0.0047 Score=50.39 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 293
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.05 E-value=0.045 Score=60.40 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
.+|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 899999875
No 294
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.05 E-value=0.005 Score=48.57 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~ 76 (455)
.+|+|+|+|..|..++..|.+.| ++|.+++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999864
No 295
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.03 E-value=0.0078 Score=61.60 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=33.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...+|+|||+|.+|+-+|..|++.|.+|++++|.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 3568999999999999999999999999999998754
No 296
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.00 E-value=0.0075 Score=49.52 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 297
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.99 E-value=0.016 Score=57.80 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=32.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~-V~l~Er~~~~ 78 (455)
...+|+|||||..|+-+|..|.+.|.+ |++++|++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 346899999999999999999999985 9999987643
No 298
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.93 E-value=0.039 Score=54.62 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCc-ceeEEEEeCEEEeecCC
Q 012845 158 NKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGK-CTERNIQCNILIGTDGA 235 (455)
Q Consensus 158 ~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~-~~~~~~~~d~vV~AdG~ 235 (455)
.+.+.+.+++.|+ +++.+++|++++. +.+.+.... .+|. ....++.+|+||.|.|.
T Consensus 211 ~~~~~~~l~~~gI-------------------~~~~~~~v~~v~~--~~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 211 KGILTKGLKEEGI-------------------EAYTNCKVTKVED--NKMYVTQVD-EKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHTTC-------------------EEECSEEEEEEET--TEEEEEEEC-TTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHCCC-------------------EEEcCCEEEEEEC--CeEEEEecc-cCCccccceEEEEeEEEEcCCC
Confidence 3446666777786 9999999999864 344443321 1222 11347899999999883
No 299
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.83 E-value=0.0076 Score=56.11 Aligned_cols=35 Identities=17% Similarity=0.348 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 300
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.79 E-value=0.0079 Score=56.57 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=33.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 358999999999999999999999999999998754
No 301
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.69 E-value=0.0077 Score=56.89 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||+|..|...|..++.+|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 302
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.56 E-value=0.01 Score=55.66 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=33.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
++.+|.|||.|..|..+|..|++.|++|++++|++..
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 3568999999999999999999999999999998753
No 303
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.44 E-value=0.06 Score=53.14 Aligned_cols=54 Identities=7% Similarity=0.077 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCC
Q 012845 157 LNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (455)
Q Consensus 157 l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~ 236 (455)
+.+.+.+.+++.|+ +++.+++|++++.+ . +++. +-.+...++.+|+||.|.|..
T Consensus 202 ~~~~l~~~l~~~GV-------------------~i~~~~~v~~v~~~--~--v~~~---~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 202 SKRLVEDLFAERNI-------------------DWIANVAVKAIEPD--K--VIYE---DLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTC-------------------EEECSCEEEEECSS--E--EEEE---CTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHCCC-------------------EEEeCCEEEEEeCC--e--EEEE---ecCCCceEEeeeEEEECCCCc
Confidence 34456677778786 99999999999653 3 3344 311122478999999998854
No 304
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.42 E-value=0.013 Score=55.95 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
++.+|+|||+|-.|.++|..|++.|+ +|.++|++..
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999999999999999999998 9999998753
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.36 E-value=0.015 Score=50.04 Aligned_cols=34 Identities=26% Similarity=0.219 Sum_probs=31.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~-g~~V~l~Er~~ 76 (455)
...|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 306
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.36 E-value=0.016 Score=55.75 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 307
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.32 E-value=0.015 Score=47.49 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 308
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.28 E-value=0.016 Score=54.91 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 309
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.25 E-value=0.014 Score=55.57 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699999874
No 310
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.23 E-value=0.015 Score=55.09 Aligned_cols=32 Identities=31% Similarity=0.614 Sum_probs=30.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.+|+|||+|-.|.++|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999999999999985
No 311
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.10 E-value=0.07 Score=52.18 Aligned_cols=51 Identities=12% Similarity=0.183 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCC
Q 012845 156 KLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGA 235 (455)
Q Consensus 156 ~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~ 235 (455)
.+.+.+.+.+++.|+ +++.+++|++++.+ . +++. +|+ ++.+|+||.|.|.
T Consensus 219 ~~~~~~~~~l~~~gV-------------------~~~~~~~v~~i~~~--~--v~~~---~g~----~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 219 NSRKAVASIYNQLGI-------------------KLVHNFKIKEIREH--E--IVDE---KGN----TIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHTC-------------------EEECSCCEEEECSS--E--EEET---TSC----EEECSEEEEECCE
T ss_pred HHHHHHHHHHHHCCC-------------------EEEcCCceEEECCC--e--EEEC---CCC----EEeeeEEEECCCC
Confidence 344456666677776 99999999998753 2 4444 665 7899999999995
Q ss_pred C
Q 012845 236 G 236 (455)
Q Consensus 236 ~ 236 (455)
.
T Consensus 269 ~ 269 (409)
T 3h8l_A 269 T 269 (409)
T ss_dssp E
T ss_pred C
Confidence 4
No 312
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.09 E-value=0.017 Score=54.74 Aligned_cols=36 Identities=11% Similarity=0.326 Sum_probs=32.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
+..+|+|||+|-.|..+|..|++.|+ +|.++|++..
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 34579999999999999999999998 9999998753
No 313
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.03 E-value=0.018 Score=54.05 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||.|-.|..+|..|++.|++|++++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999874
No 314
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.03 E-value=0.019 Score=54.19 Aligned_cols=32 Identities=34% Similarity=0.564 Sum_probs=29.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.+|+|||+|-.|.++|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999985
No 315
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.03 E-value=0.018 Score=55.39 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+|||+|-.|..+|..|++.|++|++++|++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 316
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.02 E-value=0.029 Score=55.68 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=31.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998865
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.98 E-value=0.023 Score=54.22 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=30.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.+|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 318
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.97 E-value=0.019 Score=50.97 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998753
No 319
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.95 E-value=0.021 Score=53.84 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=32.5
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
+...+|.|||+|..|..+|..|++.|+ +|.++|+++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 445689999999999999999999999 999999873
No 320
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.91 E-value=0.34 Score=48.74 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~~ 78 (455)
..+|+|||+|-+|.-++..|++. +.+|+++=|.+..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 35799999999999999999875 6789999988654
No 321
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.84 E-value=0.034 Score=52.26 Aligned_cols=36 Identities=19% Similarity=0.447 Sum_probs=32.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998753
No 322
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.77 E-value=0.028 Score=49.63 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998865
No 323
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.71 E-value=0.028 Score=52.15 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|.|||+|..|.++|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999998764
No 324
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.70 E-value=0.025 Score=52.77 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=31.3
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+.+|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 45689999999999999999999 999999999875
No 325
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.67 E-value=0.024 Score=56.51 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...+|.|||.|.+|+++|..|+++|++|+++|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999875
No 326
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.65 E-value=0.031 Score=56.10 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35799999999999999999999999999998753
No 327
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.57 E-value=0.024 Score=53.00 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 328
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.55 E-value=0.038 Score=49.20 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=31.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
.....|+|||||..|...|..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34578999999999999999999999999999964
No 329
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.54 E-value=0.037 Score=52.19 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998754
No 330
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.50 E-value=0.029 Score=52.64 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999863
No 331
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.35 E-value=0.033 Score=53.58 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=32.4
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+...+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3456899999999999999999999999999998753
No 332
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.31 E-value=0.04 Score=52.21 Aligned_cols=35 Identities=20% Similarity=0.447 Sum_probs=31.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
..+|+|||+|-.|..+|..|+..|+ +|.++|.+..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3579999999999999999999998 9999998743
No 333
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.31 E-value=0.029 Score=55.71 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+|||.|.+|+++|..|+++|++|+++|.+..+
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 334
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.26 E-value=0.025 Score=54.55 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998854
No 335
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.23 E-value=0.041 Score=53.48 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998864
No 336
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.15 E-value=0.044 Score=52.08 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
.+|.|||+|-.|..+|..|++.|+ +|.++|++..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 579999999999999999999999 9999998753
No 337
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.14 E-value=0.037 Score=55.01 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999998753
No 338
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.09 E-value=0.027 Score=53.08 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=29.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhC-----C-CCEEEEcC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL-----G-IKCSVLEK 74 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~-----g-~~V~l~Er 74 (455)
.+|.|||+|..|.++|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 339
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.09 E-value=0.054 Score=51.66 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=31.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||.|..|.++|..|++.|++|.++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 340
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.07 E-value=0.041 Score=52.38 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=31.9
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+..+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 346789999999999999999999999999999863
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.05 E-value=0.041 Score=51.78 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999999864
No 342
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.01 E-value=0.048 Score=51.57 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=30.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
.+.+|+|||+|-.|.++|..|+..|+ +|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35789999999999999999999998 899999874
No 343
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.97 E-value=0.04 Score=52.15 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 35799999999999999999999999999998753
No 344
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.96 E-value=0.045 Score=49.62 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=32.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...+|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 456899999999999999999999999999998754
No 345
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.94 E-value=0.046 Score=51.63 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
.+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999998 999999864
No 346
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.91 E-value=0.032 Score=49.70 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.1
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l-~Er~~~ 77 (455)
.+|.|||+|-.|.++|..|++.|++|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 4799999999999999999999999999 888754
No 347
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.85 E-value=0.057 Score=54.17 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=32.7
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+.+.+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 4567899999999999999999999999999998753
No 348
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.83 E-value=0.039 Score=55.10 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=32.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhC-CC-CEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKL-GI-KCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~-g~-~V~l~Er~~~ 77 (455)
..+|.|||+|-.|+.+|..|+++ |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999999876
No 349
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.81 E-value=0.051 Score=54.26 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=31.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998753
No 350
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.81 E-value=0.065 Score=47.49 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||+|-.|..+|..|++.|++|.+++|+.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 351
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.80 E-value=0.058 Score=49.39 Aligned_cols=34 Identities=24% Similarity=0.511 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~-V~l~Er~~ 76 (455)
..+|.|||+|-.|..+|..|++.|++ |.+++|++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35799999999999999999999999 89999864
No 352
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.79 E-value=0.047 Score=54.71 Aligned_cols=34 Identities=29% Similarity=0.539 Sum_probs=31.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||.|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999874
No 353
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.75 E-value=0.017 Score=51.73 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=30.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er 74 (455)
..+|.|||.|..|.++|..|+++|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 45799999999999999999999999999998
No 354
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.72 E-value=0.051 Score=51.07 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=29.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|+|||+|-.|.++|..|+ .|.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999864
No 355
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.70 E-value=0.061 Score=50.75 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
..+|.|||.|..|.++|..|++.|+ +|.++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 899999864
No 356
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.69 E-value=0.049 Score=50.62 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999999865
No 357
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.66 E-value=0.051 Score=51.49 Aligned_cols=34 Identities=35% Similarity=0.495 Sum_probs=30.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
...+|+|||+|..|.++|..|+..|+ ++.++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 45689999999999999999999997 89999975
No 358
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.59 E-value=0.061 Score=50.91 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g----~~V~l~Er~~~ 77 (455)
...+|.|||+|-.|.++|..|++.| ++|++++|+..
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 3457999999999999999999999 79999998754
No 359
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.59 E-value=0.024 Score=46.67 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+|||+|..|..+|..|++.|++|++++|+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999874
No 360
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.54 E-value=0.054 Score=54.12 Aligned_cols=35 Identities=23% Similarity=0.100 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|||||.+|+-+|..|++.|.+|+|+++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999999999999998765
No 361
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.48 E-value=0.044 Score=52.85 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999863
No 362
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.47 E-value=0.069 Score=52.97 Aligned_cols=36 Identities=19% Similarity=0.002 Sum_probs=32.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~-V~l~Er~~~~ 78 (455)
..+|+|||||.+|+-+|..|++.|.+ |+|++|.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 46899999999999999999999999 9999997643
No 363
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.46 E-value=0.062 Score=53.24 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=33.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|.|||.|-.|+.+|..|+++|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 468999999999999999999999999999998753
No 364
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.44 E-value=0.054 Score=50.55 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|.|||+|-.|...|..|++.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4579999999999999999999999999999874
No 365
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.43 E-value=0.032 Score=51.34 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=31.8
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35679999999999999999999999999999654
No 366
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.39 E-value=0.061 Score=50.84 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=29.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
..+|+|||+|-.|.++|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 467999999999999999999999999999 65
No 367
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.39 E-value=0.072 Score=50.38 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
..+|.|||+|-.|.++|..|+..|+ +|.++|.+..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4579999999999999999999999 9999998754
No 368
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.39 E-value=0.044 Score=51.82 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~~ 77 (455)
.+|.|||.|-.|..+|..|++.| ++|+++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 46999999999999999999999 99999999863
No 369
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.36 E-value=0.051 Score=50.48 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=31.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|.|||.|..|..+|..|++.|++|++++|++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999999864
No 370
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.34 E-value=0.053 Score=49.32 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=31.4
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 5689999999999999999999998 799999875
No 371
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.33 E-value=0.068 Score=50.16 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
+|+|||+|-.|.++|..|+..|+ +|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999864
No 372
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.33 E-value=0.071 Score=48.63 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=31.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g----~~V~l~Er~~~~ 78 (455)
.+|.|||+|-.|.++|..|++.| ++|.+++|++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 699999998653
No 373
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.30 E-value=0.087 Score=52.69 Aligned_cols=35 Identities=11% Similarity=0.284 Sum_probs=32.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999999864
No 374
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.29 E-value=0.058 Score=50.33 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||+|..|..+|..|++.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 375
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.27 E-value=0.036 Score=55.33 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
++|+|+|+|-.|..+|..|...|++|+|+|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999853
No 376
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.25 E-value=0.095 Score=53.21 Aligned_cols=36 Identities=14% Similarity=0.336 Sum_probs=33.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~ 79 (455)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999987653
No 377
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.21 E-value=0.048 Score=51.01 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=27.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.+|.+||-|..|..+|..|.++|++|++|+|++..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 46999999999999999999999999999998754
No 378
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.20 E-value=0.067 Score=52.62 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=30.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||.|-.|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3579999999999999999999 999999998754
No 379
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.15 E-value=0.094 Score=48.53 Aligned_cols=35 Identities=14% Similarity=0.257 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC---CEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI---KCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~---~V~l~Er~~~ 77 (455)
..+|.|||+|-.|.++|..|.+.|+ +|.+++|++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 3579999999999999999999999 8999998753
No 380
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.11 E-value=0.088 Score=48.79 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.5
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||+ |-.|..+|..|++.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999863
No 381
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.10 E-value=0.093 Score=52.79 Aligned_cols=36 Identities=11% Similarity=0.209 Sum_probs=33.0
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+..+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456899999999999999999999999999999753
No 382
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.09 E-value=0.063 Score=50.58 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
.+|.|||.|..|..+|..|++.|+ +|+++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 579999999999999999999999 999999974
No 383
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.03 E-value=0.092 Score=49.61 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
..+|.|||+|..|.++|..|+..|+ +|.++|.+..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4579999999999999999999988 9999998753
No 384
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.88 E-value=0.11 Score=52.08 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+.+|.|||.|..|..+|..|+++|++|.+++|++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4679999999999999999999999999999874
No 385
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.86 E-value=0.11 Score=48.57 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=31.1
Q ss_pred cCEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVG-gG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.||| .|-.|.++|..|++.|++|+++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998653
No 386
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.81 E-value=0.1 Score=51.27 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+..|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999854
No 387
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.80 E-value=0.079 Score=51.79 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999998754
No 388
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.76 E-value=0.092 Score=51.01 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 389
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.71 E-value=0.1 Score=49.14 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=29.9
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~ 77 (455)
+|+|||+|-.|..+|..|++. |.+|.++|++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 699999999999999999985 789999999753
No 390
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.66 E-value=0.073 Score=50.46 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er 74 (455)
+|.|||+|-.|.++|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999998
No 391
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.61 E-value=0.11 Score=48.92 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
.+|+|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 392
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.56 E-value=0.08 Score=52.44 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999874
No 393
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.48 E-value=0.13 Score=51.65 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|..|..+|..|+++|++|.+++|++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 394
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.45 E-value=0.057 Score=51.72 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=31.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g-------~~V~l~Er~~~ 77 (455)
.+|.|||+|-.|.++|..|++.| ++|++++|++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998765
No 395
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.45 E-value=0.1 Score=49.39 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHH-HHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLV-LSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~-~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|.+|.+ +|..|.++|++|+++|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46999999999996 89999999999999998764
No 396
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.43 E-value=0.09 Score=49.11 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||.|..|..+|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999875
No 397
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.34 E-value=0.14 Score=46.31 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=30.6
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC----CEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI----KCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~----~V~l~Er~~ 76 (455)
.+|.|||+|-.|.++|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999864
No 398
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.34 E-value=0.12 Score=54.67 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 3699999999999999999999999999998753
No 399
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.27 E-value=0.081 Score=52.87 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~ 77 (455)
.+|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999999 899999998753
No 400
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.27 E-value=0.13 Score=47.87 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=30.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|.|||+|-.|..+|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 599999999999999999999999999998753
No 401
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.26 E-value=0.1 Score=50.19 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999864
No 402
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.20 E-value=0.12 Score=45.41 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.8
Q ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVG-gG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|+||| +|-.|..+|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 403
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.18 E-value=0.16 Score=46.84 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=31.9
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..|+|.|+|..|..++..|.+.|++|+++.|+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46999999999999999999999999999997643
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.16 E-value=0.12 Score=47.52 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|..|.++|..|++.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999763
No 405
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.10 E-value=0.11 Score=50.35 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g-------~~V~l~Er~~~ 77 (455)
+|.|||+|-.|.++|..|++.| ++|++++|++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.04 E-value=0.06 Score=48.26 Aligned_cols=35 Identities=17% Similarity=0.063 Sum_probs=30.5
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34579999999999999999999999 999998753
No 407
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.99 E-value=0.16 Score=47.96 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=31.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
...+|.|||+|..|..+|..|+..|+ +|.++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34689999999999999999999998 899999853
No 408
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.90 E-value=0.11 Score=50.08 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=32.6
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
..+.+|+|+|||.+|..+|..|...|. +|+++|++-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 346789999999999999999999999 899999874
No 409
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.88 E-value=0.11 Score=49.00 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
+|+|||+|-.|.++|..|++.|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 59999999999999999999999 999999864
No 410
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.87 E-value=0.11 Score=48.54 Aligned_cols=34 Identities=21% Similarity=0.522 Sum_probs=30.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~ 77 (455)
.+|.|||+|-.|..+|+.|+..|+ +|.|+|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 579999999999999999999998 8999998753
No 411
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.87 E-value=0.12 Score=47.16 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g-~~V~l~Er~~ 76 (455)
+|.|||+|-.|..+|..|++.| ++|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5999999999999999999999 9999999864
No 412
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=91.83 E-value=0.19 Score=48.64 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=32.4
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
....|+|||+|..|..+|..+.+.|++|.++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 456799999999999999999999999999997654
No 413
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.79 E-value=0.15 Score=47.19 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|..|...|..|++ |++|++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 414
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.74 E-value=0.17 Score=47.91 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=31.6
Q ss_pred CcccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 41 EAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 41 ~~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.....|+|.|| |-.|..++..|.+.|++|.++.|....
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 34568999999 999999999999999999999998643
No 415
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.73 E-value=0.17 Score=46.37 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=32.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|+|+|+|-+|.++|..|++.|.+|+|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999988999999864
No 416
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=91.73 E-value=0.17 Score=50.67 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|..|..+|..|+++|++|++++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 417
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.65 E-value=0.14 Score=48.23 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.2
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
.++.+|+|||+|-.|.++|+.|+..+. ++.|+|.+
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 456789999999999999999999886 79999975
No 418
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.57 E-value=0.12 Score=50.42 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||.|-.|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 59999999999999999999 99999999874
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.53 E-value=0.13 Score=47.30 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|+|.|+|..|..++..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999864
No 420
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=91.53 E-value=0.21 Score=47.56 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||.|..|.++|..|++.|++|.+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 4799999999999999999999999999998753
No 421
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.52 E-value=0.15 Score=45.56 Aligned_cols=36 Identities=31% Similarity=0.344 Sum_probs=31.8
Q ss_pred cccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+...|+|.|| |-.|..++..|.+.|++|.++.|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3457999998 99999999999999999999998753
No 422
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.51 E-value=0.24 Score=49.65 Aligned_cols=101 Identities=22% Similarity=0.431 Sum_probs=78.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcccccChhHHHHHHhhhchHHHHHhcCCCcccccceEEe
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~~~~~~~~~l~~~~~~~l~~~~gl~~~l~~~~~~~~~~~~~~~~ 121 (455)
...+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------------------~~~------------------- 231 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-------------------NFD------------------- 231 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TSC-------------------
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-------------------ccC-------------------
Confidence 356899999999999999999999999999998764310 000
Q ss_pred ecCCCCccccccCCCccccccccCCccccccchhhHHHHHHHHHHhcccccccCCCcccccccccccceEEeccEEEEee
Q 012845 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (455)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~i~ 201 (455)
..+.+.|.+.+++.|+ +++.+++|++++
T Consensus 232 ---------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~ 259 (484)
T 3o0h_A 232 ---------------------------------YDLRQLLNDAMVAKGI-------------------SIIYEATVSQVQ 259 (484)
T ss_dssp ---------------------------------HHHHHHHHHHHHHHTC-------------------EEESSCCEEEEE
T ss_pred ---------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEE
Confidence 1344456667777786 999999999999
Q ss_pred ecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCchh
Q 012845 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (455)
Q Consensus 202 ~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~v 239 (455)
.+++.+.+.+. +|+ ++.+|.||.|.|..+..
T Consensus 260 ~~~~~v~v~~~---~g~----~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 260 STENCYNVVLT---NGQ----TICADRVMLATGRVPNT 290 (484)
T ss_dssp ECSSSEEEEET---TSC----EEEESEEEECCCEEECC
T ss_pred eeCCEEEEEEC---CCc----EEEcCEEEEeeCCCcCC
Confidence 88777767665 664 78999999999976543
No 423
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.51 E-value=0.17 Score=46.52 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 424
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.47 E-value=0.13 Score=49.45 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=32.1
Q ss_pred CcccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCC
Q 012845 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (455)
Q Consensus 41 ~~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~ 75 (455)
....+|+|+|+|-+|..+|..|...|. +|+++||+
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356799999999999999999999998 69999987
No 425
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.47 E-value=0.16 Score=46.80 Aligned_cols=32 Identities=34% Similarity=0.395 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
+|.|||+|..|.++|..|++.|+ +|.++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899999763
No 426
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.42 E-value=0.14 Score=47.74 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
+|.|||+|-.|.++|..|++.|+ +|.++|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999864
No 427
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.40 E-value=0.14 Score=53.93 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=31.5
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
.+|.|||+|..|..+|..|+++|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4699999999999999999999999999998753
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.32 E-value=0.15 Score=49.18 Aligned_cols=34 Identities=26% Similarity=0.502 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...|+|+|+|..|+.+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999764
No 429
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.18 E-value=0.19 Score=46.94 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999874
No 430
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.18 E-value=0.16 Score=47.97 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
...+|+|||+|-.|.++|..|+..|+ ++.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 79999975
No 431
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.17 E-value=0.18 Score=46.47 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=32.5
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~~ 78 (455)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSR 153 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 4689999999999999999999999 89999998643
No 432
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.11 E-value=0.17 Score=47.71 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=30.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~ 76 (455)
..+|+|||+|..|.++|+.|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4589999999999999999998886 799999863
No 433
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.09 E-value=0.12 Score=50.43 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=28.0
Q ss_pred CEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 012845 45 PVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~-~g~~V~l~Er 74 (455)
+|+|||+|-.|.++|..|++ .|++|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 5999999994
No 434
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.05 E-value=0.15 Score=47.82 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g--~~V~l~Er~~ 76 (455)
+|+|||+|-.|.++|..|++.| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999864
No 435
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.02 E-value=0.17 Score=47.52 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~~~ 77 (455)
+|+|||+|..|.++|..|++.|+ ++.++|.+..
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 59999999999999999999987 8999998753
No 436
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.00 E-value=0.17 Score=47.83 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
...+|+|||+|..|.++|..|+..|+ ++.|+|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 44689999999999999999999987 79999985
No 437
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=90.93 E-value=0.18 Score=50.92 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=30.3
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--------------CCCEEEEcCCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--------------GIKCSVLEKNKAFS 79 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--------------g~~V~l~Er~~~~~ 79 (455)
..++|||||+.|+=+|..|++. +.+|+|+|..+...
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 3699999999999999988753 36899999988753
No 438
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.91 E-value=0.18 Score=48.89 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...|+|+|+|..|+.+|..|+..|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.85 E-value=0.2 Score=48.11 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.|+|+|||..|..+|+.+++.|++|.++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5999999999999999999999999999987653
No 440
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.78 E-value=0.19 Score=46.35 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.3
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
..+|+|||+|-+|.++|..|.+.|.+|++++|+.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 441
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.77 E-value=0.2 Score=47.44 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=31.6
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 35789999999999999999999998 599999875
No 442
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=90.63 E-value=0.19 Score=49.07 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
|+....|+|+|||..|..++.++.+.|++|.+++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 4456789999999999999999999999999999 54
No 443
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.61 E-value=0.25 Score=46.02 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=32.2
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 457999999 99999999999999999999999765
No 444
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.60 E-value=0.2 Score=46.52 Aligned_cols=35 Identities=40% Similarity=0.572 Sum_probs=31.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46799999999999999999999998 699999764
No 445
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.57 E-value=0.25 Score=46.85 Aligned_cols=34 Identities=24% Similarity=0.233 Sum_probs=31.2
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+..|+|.|| |-.|..++..|.+.|++|.++.|.+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 457999999 9999999999999999999999976
No 446
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.53 E-value=0.16 Score=50.94 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=30.7
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~~ 77 (455)
.+|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 3699999999999999999998 799999998753
No 447
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.53 E-value=0.28 Score=48.13 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=32.1
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...+|+|+|+|..|..++.++.+.|++|.++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 456899999999999999999999999999986543
No 448
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.38 E-value=0.23 Score=42.83 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.2
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..|+|.|| |-.|..++..|.+.|++|.++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999999764
No 449
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.38 E-value=0.22 Score=45.26 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|.|||+|-.|...|..|.+.|++|.+++|++
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 69999999999999999999999999999864
No 450
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.35 E-value=0.2 Score=49.80 Aligned_cols=35 Identities=29% Similarity=0.236 Sum_probs=31.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||||.+|...|..|.+.|.+|+|++...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 34679999999999999999999999999999753
No 451
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.20 E-value=0.2 Score=44.26 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.6
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
.+|+|.|| |..|..++..|.+.|++|.++.|++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 46999996 999999999999999999999998653
No 452
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.20 E-value=0.21 Score=45.54 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=28.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er 74 (455)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 599999999999999999999999999876
No 453
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.18 E-value=0.31 Score=44.29 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~~ 77 (455)
.|+|||+|-+|.+++..|.+.|. +|+|+.|+..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 89999999999999999999998 8999999753
No 454
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.15 E-value=0.32 Score=44.36 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|+|||+|-+|.++|..|.+.|.+|++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 455
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.09 E-value=0.32 Score=47.15 Aligned_cols=36 Identities=25% Similarity=0.491 Sum_probs=32.3
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
....|+|+|+|..|..+|.++.+.|++|.+++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 345899999999999999999999999999997654
No 456
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.07 E-value=0.28 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=30.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
...+|+|||+|-.|.++|+.|+..|+ ++.|+|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45689999999999999999999997 79999975
No 457
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.97 E-value=0.27 Score=43.00 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.7
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999874
No 458
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=89.92 E-value=0.23 Score=52.33 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=32.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
-.+|.|||+|..|...|..++.+|++|+++|.++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 46899999999999999999999999999998754
No 459
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.92 E-value=0.19 Score=46.20 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=31.2
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 460
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.88 E-value=15 Score=36.39 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=28.9
Q ss_pred CcEEEEcCccccCCCCcCccchhhHHHHHHHHHHHHHhHc
Q 012845 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK 398 (455)
Q Consensus 359 ~~vvliGDAAh~~~P~~G~G~~~Al~da~~La~~L~~~~~ 398 (455)
+++.++||+.+ |.|++-|+.+|...|+.|.+.+.
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 78999999864 56899999999999998877653
No 461
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.87 E-value=0.27 Score=45.88 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34679999999999999999999999999999874
No 462
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.82 E-value=0.31 Score=45.96 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=32.3
Q ss_pred cccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 42 AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 42 ~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+...|+|.|| |-.|..++..|++.|++|.+++|....
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 4457999995 999999999999999999999987643
No 463
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.72 E-value=0.29 Score=48.19 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.0
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
.+|.|||.|-.||.+|..|++.|++|+.+|-++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999874
No 464
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.72 E-value=0.28 Score=45.57 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||.|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34679999999999999999999999999999874
No 465
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.69 E-value=0.32 Score=45.60 Aligned_cols=32 Identities=25% Similarity=0.507 Sum_probs=29.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
+|.|||+|-.|..+|..|+..|+ +|.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999898 699999874
No 466
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.65 E-value=0.25 Score=51.90 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=32.6
Q ss_pred ccCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVG--gG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..+|+||| +|..|+-+|..|++.|.+|+++++.+..
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 34699999 9999999999999999999999988764
No 467
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=89.16 E-value=0.065 Score=46.98 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=31.6
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..+|.|||+|-.|.++|..|.+.|++|++++|+..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 34699999999999999999999999999998754
No 468
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=89.58 E-value=0.33 Score=45.39 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=30.9
Q ss_pred cCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 44 ~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
..|+|+|| |-.|..++..|.+.|++|.++.|++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 46999997 99999999999999999999998764
No 469
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.54 E-value=0.25 Score=45.73 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.4
Q ss_pred cCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNK 76 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~--g~~V~l~Er~~ 76 (455)
.+|.|||+|-.|.++|..|++. |.+|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4699999999999999999988 67899999763
No 470
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.50 E-value=0.32 Score=45.78 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=31.3
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...|+|.|| |-.|..++..|++.|++|+++.|...
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT 55 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 457999998 99999999999999999999998643
No 471
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.50 E-value=0.27 Score=45.16 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=31.7
Q ss_pred ccccCCCCCcccccccCCCcccccCCcccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 16 IKTFPYPYGYTQCRALSDSKTIVSNEAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+.|.|.+.+....++..+.. ......|+|.|| |-.|..+|..|+++|.+|.+++|+..
T Consensus 9 ~~~~~~~~~g~~~m~~~~~~----~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 67 (276)
T 3r1i_A 9 MGTLEAQTQGPGSMSVLDLF----DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSD 67 (276)
T ss_dssp --------------CGGGGG----CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred ccceeccccCCCCccccccc----CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45666666554333322211 123456888886 67799999999999999999998643
No 472
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.50 E-value=0.36 Score=45.88 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=29.6
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
..+|+|||+ |-.|.++|..|+..|. +|.++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 457999998 9999999999999985 79999975
No 473
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.45 E-value=0.33 Score=48.24 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=31.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|+|+|..|..+|..|+..|.+|.++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35679999999999999999999999999999864
No 474
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.44 E-value=0.32 Score=44.21 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=30.6
Q ss_pred cccCEEEECC-C-HHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGA-G-PVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGg-G-~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|.|| | -.|..+|..|+++|++|.+++|+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3567999999 7 499999999999999999999874
No 475
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.38 E-value=0.35 Score=49.48 Aligned_cols=35 Identities=14% Similarity=0.392 Sum_probs=33.2
Q ss_pred cCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 44 ~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
..|+|||+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999999999999999999765
No 476
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.35 E-value=0.34 Score=44.84 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.0
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 45 dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
+|+|.|| |..|..++..|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5999999 999999999999999999999987543
No 477
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.28 E-value=0.31 Score=44.23 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5689999999999999999999998 689999764
No 478
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.08 E-value=0.21 Score=46.24 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 45 dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
+|.|||+|-.|..+|..|++.|++|++++ ++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 69999999999999999999999999999 644
No 479
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.04 E-value=0.34 Score=42.55 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=29.8
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 45 dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
+|+|.|| |-.|..++..|.+.|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999874
No 480
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=88.95 E-value=0.17 Score=49.04 Aligned_cols=39 Identities=13% Similarity=0.190 Sum_probs=32.3
Q ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCC--------CEEEEcCCCCC
Q 012845 40 NEAVVPVLIVGAGPVGLVLSILLTKLGI--------KCSVLEKNKAF 78 (455)
Q Consensus 40 ~~~~~dVvIVGgG~aGl~~A~~La~~g~--------~V~l~Er~~~~ 78 (455)
..++.+|.|||+|-=|.++|..|+++|. +|+++-|++..
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~ 77 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEI 77 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBS
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHh
Confidence 3567799999999999999999999864 49999887654
No 481
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=88.92 E-value=0.26 Score=46.63 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=29.9
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCC-------CEEEEcCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGI-------KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~-------~V~l~Er~~ 76 (455)
..+|+|+|| |-.|..++..|.+.|+ +|.++|+..
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 357999998 9999999999999986 899999753
No 482
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.87 E-value=0.38 Score=44.43 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4579999999999999999999999 599999874
No 483
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=88.79 E-value=0.27 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=29.7
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCC-------CEEEEcCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGI-------KCSVLEKN 75 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~-------~V~l~Er~ 75 (455)
+.+|+|+|| |-.|..++..|+..|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 468999998 9999999999999886 79999976
No 484
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.53 E-value=0.39 Score=45.12 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.0
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4579999999999999999999999 799999874
No 485
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.52 E-value=0.45 Score=45.27 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=30.5
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLG-IKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g-~~V~l~Er~~~ 77 (455)
...|+|.|| |..|..++..|.+.| ++|.++.|...
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 357999998 999999999999999 99999998754
No 486
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.48 E-value=0.31 Score=47.89 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
-.+.-|||.|-.|+.+|..|+++|++|+++|+++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 35789999999999999999999999999999854
No 487
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.48 E-value=0.35 Score=45.33 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=30.8
Q ss_pred cccCEEEECCC-HHHHHHHHHHHhCCCCEEEEcCC
Q 012845 42 AVVPVLIVGAG-PVGLVLSILLTKLGIKCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG-~aGl~~A~~La~~g~~V~l~Er~ 75 (455)
...+|+|||+| +.|..+|..|...|.+|++.+|+
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45789999999 67999999999999999999876
No 488
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.47 E-value=0.32 Score=47.43 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=31.9
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34689999999999999999999999999999864
No 489
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.45 E-value=0.43 Score=43.80 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=31.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
....|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 34679999999999999999999997 899999864
No 490
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.44 E-value=0.4 Score=44.23 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=30.8
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4679999999999999999999997 899999864
No 491
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=88.42 E-value=0.43 Score=43.02 Aligned_cols=36 Identities=11% Similarity=0.226 Sum_probs=31.2
Q ss_pred ccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...|+|.|| |-.|..+|..|+++|++|.+++|+...
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 356899997 578999999999999999999998754
No 492
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.39 E-value=0.35 Score=44.81 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=29.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
...|+|+|+|-+|.++|..|++.| +|+|++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 356999999999999999999999 999999863
No 493
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.39 E-value=0.51 Score=44.33 Aligned_cols=35 Identities=26% Similarity=0.207 Sum_probs=31.1
Q ss_pred cccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|.|| |-.|..++..|.+.|++|+++.|+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3457999998 9999999999999999999998863
No 494
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.32 E-value=0.45 Score=45.12 Aligned_cols=35 Identities=11% Similarity=0.255 Sum_probs=31.9
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
...|.|||.|-.|..+|..|+..|++|.++++...
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 35699999999999999999999999999998754
No 495
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.31 E-value=0.3 Score=46.75 Aligned_cols=34 Identities=26% Similarity=0.572 Sum_probs=31.1
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~-~V~l~Er~~ 76 (455)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5789999999999999999999998 599999764
No 496
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.28 E-value=0.92 Score=45.46 Aligned_cols=42 Identities=17% Similarity=0.212 Sum_probs=31.3
Q ss_pred eEEeccEEEEeeecCCceEEEEEeccCCcceeEEEEeCEEEeecCCCch
Q 012845 190 EILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (455)
Q Consensus 190 ~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~~~d~vV~AdG~~S~ 238 (455)
+|+.++.|+++..++....+.+. +|. ++.+|+||.|.|....
T Consensus 273 ~v~~~~~v~~i~~~~~v~~v~~~---~g~----~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 273 DYVHIPNVKRVEGNEKVERVIDM---NNH----EYKVDALIFADGRRPD 314 (493)
T ss_dssp EEEECSSEEEEECSSSCCEEEET---TCC----EEECSEEEECCCEEEC
T ss_pred EEEeCCeeEEEecCCceEEEEeC---CCe----EEEeCEEEECCCcCcC
Confidence 89999999999865443334433 554 7899999999997653
No 497
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.27 E-value=0.57 Score=44.38 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=32.7
Q ss_pred ccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 012845 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (455)
Q Consensus 43 ~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~~~ 78 (455)
...|.|||.|-.|..+|..|+..|.+|.++++....
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~ 199 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKP 199 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchh
Confidence 457999999999999999999999999999988654
No 498
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=88.22 E-value=0.12 Score=49.12 Aligned_cols=37 Identities=27% Similarity=0.163 Sum_probs=32.7
Q ss_pred CcccCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 012845 41 EAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (455)
Q Consensus 41 ~~~~dVvIVGg-G~aGl~~A~~La~~g~~V~l~Er~~~ 77 (455)
++...|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 34568999996 99999999999999999999998764
No 499
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.14 E-value=0.39 Score=45.37 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.2
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~--~V~l~Er~ 75 (455)
++.+|+|||+|-.|.++|+.|+..++ ++.|+|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44789999999999999999998886 79999974
No 500
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.04 E-value=0.46 Score=47.50 Aligned_cols=35 Identities=31% Similarity=0.316 Sum_probs=31.7
Q ss_pred cccCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 012845 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (455)
Q Consensus 42 ~~~dVvIVGgG~aGl~~A~~La~~g~~V~l~Er~~ 76 (455)
....|+|||.|..|..+|..|+..|.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999864
Done!