Your job contains 1 sequence.
>012846
MPSAKTIVSTAASVAASAMVIRSIARELVPHELKLFVLMNIRGLFESFSSEITLIIDQFD
GLASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQ
VTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKT
LKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRV
GKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSIL
VVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNH
KDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPAD
VGEQLLKNEDPEIALKGLLEFLNAKLIEGCESQAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012846
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 1211 1.6e-128 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 1135 3.9e-115 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 1065 1.0e-107 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 1043 2.2e-105 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 1033 2.5e-104 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 1032 3.2e-104 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 982 6.4e-99 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 887 7.5e-89 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 590 5.6e-88 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 810 1.0e-86 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 784 8.2e-85 2
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 837 1.5e-83 1
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 837 1.5e-83 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 759 1.3e-82 2
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 827 1.7e-82 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 810 1.1e-80 1
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 521 1.7e-80 2
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 780 1.6e-77 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 756 5.7e-75 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 749 3.1e-74 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 736 7.5e-73 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 687 1.2e-67 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 653 4.7e-64 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 345 2.0e-31 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 338 1.1e-30 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 329 1.0e-29 1
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 325 2.7e-29 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 324 3.4e-29 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 324 5.9e-29 1
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 321 7.1e-29 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 321 7.1e-29 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 320 9.1e-29 1
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 318 1.5e-28 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 315 3.1e-28 1
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 312 6.4e-28 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 312 6.4e-28 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 317 8.2e-28 1
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 306 8.0e-27 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 305 9.0e-27 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 212 3.2e-26 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 297 3.5e-25 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 288 1.4e-23 1
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 287 2.8e-23 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 287 2.8e-23 1
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 287 3.6e-23 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 249 8.5e-21 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 173 4.5e-20 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 256 4.5e-19 1
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 237 3.6e-17 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 215 5.1e-17 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 162 1.6e-16 2
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 169 3.1e-15 2
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 190 2.8e-14 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 182 2.1e-13 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 189 4.9e-12 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 189 4.9e-12 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 177 3.9e-10 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 171 5.8e-10 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 171 5.8e-10 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 170 7.2e-10 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 169 9.4e-10 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 172 9.9e-10 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 168 1.2e-09 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 171 1.5e-09 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 168 1.6e-09 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 168 1.6e-09 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 166 2.5e-09 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 164 3.2e-09 1
POMBASE|SPCC576.10c - symbol:rpt3 "19S proteasome regulat... 164 3.2e-09 1
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 164 3.4e-09 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 164 3.4e-09 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 163 4.3e-09 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 163 4.4e-09 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 162 4.7e-09 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 167 4.9e-09 1
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 163 5.1e-09 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 163 5.4e-09 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 162 5.5e-09 1
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 141 6.1e-09 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 162 6.9e-09 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 162 7.0e-09 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 162 7.0e-09 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 162 7.0e-09 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 162 7.0e-09 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 162 7.0e-09 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 162 7.0e-09 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 162 7.0e-09 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 162 7.0e-09 1
UNIPROTKB|E1C6S3 - symbol:SPAST "Spastin" species:9031 "G... 164 7.1e-09 1
UNIPROTKB|F1NCJ3 - symbol:SPAST "Spastin" species:9031 "G... 164 7.3e-09 1
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G... 164 7.5e-09 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 161 7.6e-09 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 165 7.7e-09 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 160 8.6e-09 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 160 9.0e-09 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 160 9.0e-09 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 160 9.0e-09 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 160 9.0e-09 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 160 9.0e-09 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 160 9.0e-09 1
WARNING: Descriptions of 344 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 1211 (431.4 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 224/430 (52%), Positives = 326/430 (75%)
Query: 27 ELVPHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMF 86
+ +P E+ ++ R +F FSS++T+II++F+G A N+++ AA+ YL KISPS K
Sbjct: 81 DYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFEGFAHNEVFEAAEAYLATKISPSNKRI 140
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
+VS EKEN ++++ +++E+VD ++GVK +W R VES + + ++ ++SE+R
Sbjct: 141 KVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILHCRHVESKHFHNPRDLNSTLRSEVRS 200
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
F L FHK+ KD L SY P++++++ ++E KTLK+++L+ ++ D+W +T +H
Sbjct: 201 FELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIFTLSPENMYGNYSDAWTSVTLDH 260
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P+TF TLAM++++K ++EDL++FVKR+D+Y+RVGKAWKRGYLLYGPPGTGKSSLIAAM+
Sbjct: 261 PSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMA 320
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQ--PTTVNVL 324
N+LNFDIYDLEL+AV++NSELRR+L++T NRSIL+VEDIDCSLEL+DR + P + +
Sbjct: 321 NHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVEDIDCSLELKDRTSDEPPRESDDI 380
Query: 325 KPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
+ R +VTLSGLLNF+DGLWSSCGDERII+FTTN+K++LD A+LRPGRMD+HI+MSYCT
Sbjct: 381 EDPRYKKVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCT 440
Query: 385 PCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLNA 444
P F LA NYL I +H L +I+E ++ VTPA+V EQL++N+ + L+GL+EFL
Sbjct: 441 PSTFKALALNYLEIKEHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKV 500
Query: 445 KLIEGCESQA 454
K IE + +A
Sbjct: 501 KKIENEQDKA 510
Score = 71 (30.1 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 416 VTPADVGEQLLKNEDPEIALKGLLEFLNAKLIEGCESQA 454
V +V EQL++N+ + L+GL+E L AK IE + +A
Sbjct: 530 VVKKEVDEQLVRNDRVDKVLEGLVELLKAKKIEDDQDKA 568
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 212/419 (50%), Positives = 315/419 (75%)
Query: 27 ELVPHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMF 86
+ +P+E+ ++ R F FS ++T +I++F G NQ++ AA+ YL KIS ST+
Sbjct: 35 DYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFGGFEHNQVFEAAEAYLSTKISNSTRRI 94
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
+V+ EK++ S+++ +++E+VD FDGVKL W V R V+ + + ++ ++SE+R
Sbjct: 95 KVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHVDKKDFRNPRDLNSTLKSEVRS 154
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
+ L+F K+ K+ VL SY P+++ ++ S +++ KTLK+++++ + ++ W +T +H
Sbjct: 155 YELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFTVDS-----YSVE-WTSVTLDH 208
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P+TF TLA++ E+KK ++EDL+RFV+RK +Y RVGKAWKRGYLLYGPPGTGKSSLIAA++
Sbjct: 209 PSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIA 268
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKP 326
N+LNFDIYDL+L+++++N+ELRR+L+ST NRSILVVEDIDCS+EL+DR + P
Sbjct: 269 NHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIELKDRSTDQENND---P 325
Query: 327 LRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPC 386
L VTLSGLLNF+DGLWSSCG+ERIIVFTTN++++LDPA+LRPGRMD+HI+MSYCTP
Sbjct: 326 LHKT-VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPA 384
Query: 387 GFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLNAK 445
F LA+NYL I DH L +I+E ++ + VTPA+V EQL++++ + L+GL+EFL AK
Sbjct: 385 AFKVLASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAK 443
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 212/427 (49%), Positives = 296/427 (69%)
Query: 27 ELVPHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMF 86
+ VP +L+ + + F S +T+IID+ GL NQ++ AA++YL +KI P T+
Sbjct: 34 DFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRNQVFDAAEMYLRSKIGPETERL 93
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
RV K+ +IS+ + +EI+D F+ ++KW V + E G K RY
Sbjct: 94 RVGKIPKQKHFTISIERGEEILDTFEESEVKWSYVQSENEK-------GDKVK-----RY 141
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLN---QDHARRFGLDSWHWIT 203
+ LTF K+ +DKVLNSY +++ +S+ + + +KLYS + D +W I
Sbjct: 142 YELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDDDGMAGGNWGCIN 201
Query: 204 FNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 263
HP+TFDTLAM+ KK II+DLERF+KRK++Y+RVGKAWKRGYLLYGPPGTGKSSLIA
Sbjct: 202 LEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIA 261
Query: 264 AMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
AM+NYL FD++DLELS+++ N EL+RVLLST NRSILV+EDIDC+ E+ DR+A+
Sbjct: 262 AMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDREAENQEDEQ 321
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
+K +VTLSG+LNF+DGLWSS GDERIIVFTTNHK+RLDPA+LRPGRMDVHI MSYC
Sbjct: 322 IKG----KVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYC 377
Query: 384 TPCGFDTLAANYLGIT--DHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEF 441
T GF TL +NYLG+ +HPL EI+ ++ + VTPA++ E+L++++D ++ L+G++ F
Sbjct: 378 TGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVISF 437
Query: 442 LNAKLIE 448
+ + +E
Sbjct: 438 VEKRKVE 444
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 217/441 (49%), Positives = 302/441 (68%)
Query: 27 ELVPHELKLFVLMNIRGLF-ESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKM 85
EL+P L+ F+ +R LF S SS +TL ID + +N+IYRAA YL KISP
Sbjct: 33 ELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDDNMGMNNEIYRAAQTYLSTKISPDAVR 92
Query: 86 FRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTG-------QST 138
R+S K+ +++ ++ + + D ++ V+L W+ VT + G +
Sbjct: 93 LRISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWRFVTDGGDKKGGGGGVGGRGGGGGRRG 152
Query: 139 KMQSEIR--YFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGL 196
M + + YF L+F K+HKD +LNSY PYI K+K ++E + L L+SLN R
Sbjct: 153 GMDDDGKSEYFELSFDKKHKDLILNSYVPYIESKAKEIRDERRILMLHSLNS--LR---- 206
Query: 197 DSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGT 256
W + HP+TF+T+AME +LK+ +IEDL+RF++RK++Y+RVGKAWKRGYLLYGPPGT
Sbjct: 207 --WESVILEHPSTFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGT 264
Query: 257 GKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQA 316
GKSSL+AAM+NYL FD+YDL+L++V +S+LRR+LL+T NRSILV+EDIDC+++L +R
Sbjct: 265 GKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDIDCAVDLPNRIE 324
Query: 317 QPTT-VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
QP N + P+ TLSGLLNF+DGLWSSCGDERII+FTTNHKDRLDPA+LRPGRMD
Sbjct: 325 QPVEGKNRGESQGPL--TLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMD 382
Query: 376 VHIYMSYCTPCGFDTLAANYLGITD----HPLIYEIKEIMQNVRVTPADVGEQLLKNEDP 431
+HIYM +C+ GF TLA+NYLG++D H L EI+ ++ +TPA V E+L+K+ED
Sbjct: 383 MHIYMGHCSFQGFKTLASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDA 442
Query: 432 EIALKGLLEFLNAKLIEGCES 452
++AL+GL+ L ++ ES
Sbjct: 443 DVALEGLVNVLEKMRLKSKES 463
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 205/427 (48%), Positives = 293/427 (68%)
Query: 29 VPHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFRV 88
VP L+ ++ + F S +T++ID+ G NQ++ AA++YL NKI P T RV
Sbjct: 37 VPERLRSYITDLLNRFFTPKSKNLTMVIDEIIGFKRNQVFDAAEVYLRNKIGPETARLRV 96
Query: 89 SMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFN 148
K+ +I + K +EI+D F+ +L+W V + E++Q E RY+
Sbjct: 97 GKLPKQKHFTIYIEKGEEILDTFENSELRWTYVESENEASQ------------KEKRYYE 144
Query: 149 LTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYS----LNQDHARRFGLDSWHWITF 204
LTF K+ +DKV+NSY +++ +S+ + + + +KLYS ++D G W I
Sbjct: 145 LTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMAGA-GWGCINL 203
Query: 205 NHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 264
HP+TF+TLAM+ KK II+D+ERF+KR+++Y+RVGKAWKRGYLLYGPPGTGKSSLIAA
Sbjct: 204 EHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAA 263
Query: 265 MSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCS-LELEDRQAQPTTVNV 323
M+NYL FD++DLELS+++ N++L+ +LLST NRSILV+EDIDCS E+ DR+A
Sbjct: 264 MANYLKFDVFDLELSSIYENAQLKSILLSTTNRSILVIEDIDCSSAEVVDREADE--YQE 321
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
+ +VTLSGLLNF+DGLWSS GDERIIVFTTNHK+RLDPA+LRPGRMD+HI MSYC
Sbjct: 322 YEEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYC 381
Query: 384 TPCGFDTLAANYLGI--TDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEF 441
T GF TL +NYLG+ +HPL EI+ ++ + VTPA++ E+L++ +D ++ L+G++ F
Sbjct: 382 TGLGFRTLVSNYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVVLRGVVSF 441
Query: 442 LNAKLIE 448
+ + +E
Sbjct: 442 VENRKVE 448
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 205/439 (46%), Positives = 300/439 (68%)
Query: 28 LVPHELKLFVLMNIRGLFESFSSEITLIIDQFDGL-ASNQIYRAADIYLGNKISPSTKMF 86
++P ++ FV ++ S SS +TL IDQ + +++Y AA YL KISP++
Sbjct: 34 IIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSSMYIPDELYAAAQAYLSTKISPNSVRL 93
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
++ E K+ + ++ + + D ++G+KLKW+ + R +T Y GQS + +
Sbjct: 94 IMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLARNKNNTMVEEY-GQSYQGNIQRES 152
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
L+F K+H+D V+NSY PY+ K+K + + LK++ + H + +W + F H
Sbjct: 153 LELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKMHCYS--HMAQ----TWQSVNFKH 206
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P+TFDT+AM +LK+ +IEDL+RFV RKD+Y+RVGKAWKRGYLLYGPPGTGKSSL+AAM+
Sbjct: 207 PSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMA 266
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKP 326
NYL FDIYDL+L++V ++ LR +LL+T N SIL++EDIDCS++L R PT + +P
Sbjct: 267 NYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDLPTRLQPPTETS--QP 324
Query: 327 LRPMQV----TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSY 382
L +QV TLSGLLN +DGLWSSCG+ERII+FTTN+K++LDPA+LRPGRMD+HIYM +
Sbjct: 325 LGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGH 384
Query: 383 CTPCGFDTLAANYLGITD-----HPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKG 437
C+ GF TLA+NYLG++D HPL +IK ++ +TPA V E+L+K+ED + AL+G
Sbjct: 385 CSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDEDADAALEG 444
Query: 438 LLEFLNAKLIEG--CESQA 454
L++ L K +E C+ ++
Sbjct: 445 LVKVLKRKRLEPKKCDDES 463
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 193/425 (45%), Positives = 285/425 (67%)
Query: 29 VPHELKLFVLMNIRGLFESFSSEITLIIDQF--DGLASNQIYRAADIYLGNKISPSTKMF 86
+P L+ +++ + S S +TLIID +G+ N++Y AA +Y+ K++ + +
Sbjct: 35 IPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMY-NELYGAAQVYISTKVNHNAERL 93
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
R+S E ++I + + + D + G+++KW+ +S V Y G+ K+ +
Sbjct: 94 RISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRFCVDSNKSNM-VHYFGEHFKLNPDREC 152
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
L+F K+H + VLNSY PY+ K+K E K LK+YS + + W + H
Sbjct: 153 VELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYSYCCMYLK------WQSVNLEH 206
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P+TFDT+AM ELK+ ++ DL+RF++RKD+Y+RVGK WKRGYLLYGPPGTGK+SL+AA++
Sbjct: 207 PSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIA 266
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKP 326
NYL FDIYDL+L++V +++LRR+LL T N SIL+VEDIDC+++L R QP T + K
Sbjct: 267 NYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTR-LQPKTQDDTKG 325
Query: 327 LRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPC 386
+TLSGLL +DGLWSSCGDERI++FTT HK+RLDPA+LRPGRMD+HI+M +C
Sbjct: 326 --SSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFD 383
Query: 387 GFDTLAANYLGITD---HPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLN 443
F TLA+NYLG++ H L EI+ +++ +TPA V E+L+KNEDP++AL+GL++ L
Sbjct: 384 VFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDVALEGLVKVLK 443
Query: 444 AKLIE 448
K +E
Sbjct: 444 RKRLE 448
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 190/444 (42%), Positives = 283/444 (63%)
Query: 27 ELVPHELKLFVLMNIRGLFES-FSSEITLIIDQFDGLASNQIYRAADIYLGNKISP-ST- 83
E+VP ++ ++ M F S F S+ T +I+Q NQ +RAA++YL ++ ST
Sbjct: 34 EIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQRWEFVENQTFRAAEVYLPTCLAGLSTG 93
Query: 84 KMF----RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTK 139
K+ + P E K+ I + N +I+D+F+G+ L+W VE+ +Y+
Sbjct: 94 KLLVGSSNLKNPAAEPKLGIPV--NTKIIDNFEGIHLEW--TLHSVETKKYLP------- 142
Query: 140 MQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSW 199
E RYF+LT K+ ++K++ YF Y+ + ++ + LK+Y+ NQD ++ W
Sbjct: 143 ---EKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKIYTYNQDRSK------W 193
Query: 200 HWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKS 259
F H TF+TLA+E +LKK +I+DL+ F K KD+++ VG+AWKRGYLLYGPPGTGKS
Sbjct: 194 ESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKRGYLLYGPPGTGKS 253
Query: 260 SLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDR-QAQP 318
S++AA++N++ + IYDL++ +V + ELR +L ST NRSIL++EDIDC + R Q++
Sbjct: 254 SMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDIDCGADASRRRQSKK 313
Query: 319 TTVN-------VLKPLRPMQV--TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVL 369
+ K + +V +LSGLLNF+DGLWSSCG+E+II+FTTNHK++LDPA+L
Sbjct: 314 KEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALL 373
Query: 370 RPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNE 429
RPGRMDVHI M CTP F L A YL +H L I++++ V TPA+V +QL+ ++
Sbjct: 374 RPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVLFDPIEKLILEVSSTPAEVTQQLMASK 433
Query: 430 DPEIALKGLLEFL-NAKLIEGCES 452
+ +IALKGL EFL N KL +G +S
Sbjct: 434 NADIALKGLAEFLENKKLKKGEDS 457
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 590 (212.7 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 124/301 (41%), Positives = 188/301 (62%)
Query: 28 LVPHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFR 87
+ P EL+ L +F FSS I + DG+ +N++Y A +YL + +S + R
Sbjct: 25 IFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSIAGN--R 82
Query: 88 VSMPEKENKMSIS--MAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIR 145
+S+ N SI+ ++ N IVD F+GV + W+ V Q TQ ++ + E R
Sbjct: 83 LSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVTQ-RQTQTFAWR----PLPEEKR 137
Query: 146 YFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDS----WHW 201
F L K+ K +LNSY YI+ ++ + +N+ LY+ ++R LDS W
Sbjct: 138 GFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYT----NSRGGSLDSRGHPWES 193
Query: 202 ITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 261
+ F HP+TF+TLAM+ K+ I++DL+ F + + +Y++ G+AWKRGYLLYGPPGTGKSS+
Sbjct: 194 VPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSM 253
Query: 262 IAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTV 321
IAAM+NYL +DIYDLEL+ VHSNSELR++L+ T ++SI+V+EDIDCS+ L +R+ + V
Sbjct: 254 IAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKKNSSNV 313
Query: 322 N 322
+
Sbjct: 314 S 314
Score = 308 (113.5 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 63/119 (52%), Positives = 83/119 (69%)
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTL 391
+TLSGLLNF DGLWS CG ERI VFTTNH ++LDPA+LR GRMD+HIYMS+C L
Sbjct: 345 ITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKIL 404
Query: 392 AANYLG--ITD--HPLIYEIKEIMQNVRVTPADVGEQLLKNE-DPEIALKGLLEFLNAK 445
NYLG + D ++ E++ +++ +TPADV E L+KN D E A++ LLE L ++
Sbjct: 405 LKNYLGYGVEDINGDVLKEMEMVVEKAEMTPADVSEALIKNRRDKEKAIRELLEDLKSR 463
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 810 (290.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 165/365 (45%), Positives = 235/365 (64%)
Query: 93 KENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFH 152
+E+K + ++ D ++G+++ W+ T +S Y + LTFH
Sbjct: 101 RESKGLVLKRDETKVRDEYEGIRVWWEMET---DSAGY--------------KTLKLTFH 143
Query: 153 KQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLN-QDHARRFGLDSWHWITFNHPATFD 211
++ +D V NSY Y++ + KS +NK +KL++ N H W +I F HPATF+
Sbjct: 144 RRSRDIVTNSYIKYVVEEGKSIDAKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFE 203
Query: 212 TLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNF 271
TLAM+ + K+ I+ DL F KDYY+++GKAWKRGYLLYGPPGTGKS++IAAM+N LN+
Sbjct: 204 TLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNY 263
Query: 272 DIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELED-RQAQPTTVNVLKPLRPM 330
IYDLEL+A+ +NSELR++L +T N+SI+V+EDIDCSL+L R+ + + + + +
Sbjct: 264 SIYDLELTAIQNNSELRKILTATSNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQ 323
Query: 331 Q-------VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
VTLSGLLNF+DG+WS+CG ERIIVFTTNH +LDPA++R GRMD+HI +SYC
Sbjct: 324 DNEENKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYC 383
Query: 384 TPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNE---DPEIALKGLLE 440
T F TLA NYL + HPL +I+ +M+ + PADV E L+K D + +L L+E
Sbjct: 384 TFEAFKTLAKNYLDLDSHPLFSKIESLMKETNIAPADVAENLMKKNRETDADGSLNDLIE 443
Query: 441 FLNAK 445
L K
Sbjct: 444 SLERK 448
Score = 76 (31.8 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 48 FSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEI 107
FS + + +++ N + + YLG K + K R S +E+K + ++
Sbjct: 57 FSPYVQINFSEYEDYRVNHAFDPIETYLGAKATDKAKHLRASQV-RESKGLVLKRDETKV 115
Query: 108 VDHFDGVKLKWKQVT 122
D ++G+++ W+ T
Sbjct: 116 RDEYEGIRVWWEMET 130
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 784 (281.0 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 161/371 (43%), Positives = 238/371 (64%)
Query: 93 KENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFH 152
KE+K + ++ D ++G + W+ T +ST Y R F LTFH
Sbjct: 102 KESKGLVLKRDETKVRDEYEGGTVWWEMET---DSTGY--------------RTFKLTFH 144
Query: 153 KQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLN-QDHARRFGLDSWHWITFNHPATFD 211
++ +D V +SY Y+ + KS Q ++K +KL++ N H W +I F HPA+F
Sbjct: 145 RRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFH 204
Query: 212 TLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNF 271
TLAM+ + K+ I+ DL F K+YY+++GKAWKRGYLL+GPPGTGKS++IAAM+N+LN+
Sbjct: 205 TLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNY 264
Query: 272 DIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
IYDLEL+A+ +NSELR++L +T ++SI+V+EDIDCSL+L ++ + + +
Sbjct: 265 SIYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQG 324
Query: 332 -------VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
VTLSGLLNF+DG+WS+CG ERII+FTTNH ++LDPA++R GRMD+HI +SYC+
Sbjct: 325 TEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCS 384
Query: 385 PCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNE---DPEIALKGLLEF 441
F LA NYL + HPL +I+ +++ ++ PADV E L+K D + +LK L++
Sbjct: 385 FEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQA 444
Query: 442 LNAKL-IEGCE 451
L K I G +
Sbjct: 445 LEGKKKIHGAQ 455
Score = 84 (34.6 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 48 FSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEI 107
FS + + Q++ N + A + YLG K + K R S KE+K + ++
Sbjct: 58 FSPYVEISFSQYEDYQFNHAFAAIETYLGAKATDKAKHLRASQV-KESKGLVLKRDETKV 116
Query: 108 VDHFDGVKLKWKQVTRQVESTQYVSY 133
D ++G + W+ T +ST Y ++
Sbjct: 117 RDEYEGGTVWWEMET---DSTGYRTF 139
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 178/419 (42%), Positives = 255/419 (60%)
Query: 30 PHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFRVS 89
P EL+ + F+ FS+ I + DG+ +N++Y A +YL + +S + ++
Sbjct: 27 PPELRFAISKLFNKFFKLFSTFCYFDITEIDGVNTNELYNAVQLYLSSSVSIAGNRLSLT 86
Query: 90 MPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNL 149
+ ++ ++ N IVD F+ V + W+ + Q TQ ++ M E R F L
Sbjct: 87 RAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQ-RQTQTFAWR----PMPEEKRGFTL 141
Query: 150 TFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDS----WHWITFN 205
K+ K+ +L+SY YI+ K+ + N+ LY+ ++R LDS W + F
Sbjct: 142 RIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYT----NSRGGSLDSRGLPWESVPFK 197
Query: 206 HPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAM 265
HP+TFDTLAM+ K+ I+EDL+ F + + +Y R G+AWKRGYLLYGPPGTGKSS+IAAM
Sbjct: 198 HPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAM 257
Query: 266 SNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLK 325
+NYL +DIYDLEL+ V SNSELR++L+ T ++SI+V+EDIDCS+ L +R + +T + +
Sbjct: 258 ANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCSINLTNRNKKQSTGSYNE 317
Query: 326 P--LRPM----------QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGR 373
P L +TLSGLLNF DGLWS CG ERI VFTTNH ++LDPA+LR GR
Sbjct: 318 PEMLTGSGLGDDLGDGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGR 377
Query: 374 MDVHIYMSYCTPCGFDTLAANYLGITDHPL----IYEIKEIMQNVRVTPADVGEQLLKN 428
MD+HI+MSYCT L NYLG + L + E+ E++ +TPADV E L+KN
Sbjct: 378 MDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSEALIKN 436
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 165/345 (47%), Positives = 240/345 (69%)
Query: 74 YLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSY 133
YL +KISP R++ +++ +++ + + D + G++LKW+ + + + T V
Sbjct: 57 YLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTTVV-- 114
Query: 134 TGQSTKMQSEIRY--FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHA 191
G+ T+ ++ + + F L+F K+HKD V+ SY Y+ RK+K +EE + +K++S +
Sbjct: 115 -GEETE-EAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKMHSYSSYTL 172
Query: 192 RRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLY 251
R W + F HP+TF T+AM +LK ++EDL+RF+KRKDYY+RVGKAWKR Y LY
Sbjct: 173 R------WQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLY 226
Query: 252 GPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLEL 311
GPPGTGKSSL+AAM+NYL FDIYDL+L+ V +++LR +LL+T N SIL+VEDIDCS++L
Sbjct: 227 GPPGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDL 286
Query: 312 EDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRP 371
R QP T + P +TLSGLLN +DGLWSSCGDERI++FTTN+K+ LDPA+LRP
Sbjct: 287 PTR-LQPATTTLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRP 345
Query: 372 GRMDVHIYMSYCTPCGFDTLAANYLGI---TDHP-LIY-EIKEIM 411
G MD+HIY+ +C+ GF LA+NYLG+ +D P +Y +IK ++
Sbjct: 346 GCMDMHIYLGHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLI 390
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 759 (272.2 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 150/318 (47%), Positives = 216/318 (67%)
Query: 145 RYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITF 204
RY+ LTFH + + + NSY Y++ + KS +NK +L++ N FG + W I F
Sbjct: 141 RYYKLTFHNRARTLITNSYIKYVVEEGKSIIVKNKQTRLFTNNLSTQWVFGQNMWRSIEF 200
Query: 205 NHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 264
HPA+F TLAM+ + K+ I+ DL F K+YY+++GKAWKRGYLLYGPPGTGKS++I+A
Sbjct: 201 EHPASFQTLAMDPKKKEEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISA 260
Query: 265 MSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVL 324
M+N LN++IYDLEL+AV +NSEL+++L +T ++SI+V+EDIDCS + + + + +
Sbjct: 261 MANLLNYNIYDLELTAVKNNSELKKLLTATSSKSIIVIEDIDCSADFTSNRIKKESNSRE 320
Query: 325 KPLRPMQ----VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
+ + + VTLSGLLNF+DG+WS+CG ERI+VFTTNH ++LDPA++R GRMD+HI +
Sbjct: 321 RYGKEDKDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIEL 380
Query: 381 SYCTPCGFDTLAANYL---GITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKG 437
SYCT F LA NYL G HPL EIK +++ +++PADV E L+ +I +
Sbjct: 381 SYCTYEAFKILAKNYLDLDGDDAHPLFSEIKALLEETKISPADVAENLMARNQ-QIDVDK 439
Query: 438 LLEFLNAKLIEGCESQAS 455
L L + L E + Q S
Sbjct: 440 SLNLLISALEEENQYQRS 457
Score = 88 (36.0 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 48 FSSEITLIIDQFDGLASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEI 107
FS + + + D + NQ + A D YL +K + TK R S KE+K + ++
Sbjct: 62 FSPYVEIHFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQV-KESKGLVLKRNEAKV 120
Query: 108 VDHFDGVKLKWKQVTRQVESTQYVSYT 134
D + G + W++V + +Y T
Sbjct: 121 RDEYKGANVWWERVVDN-DGNRYYKLT 146
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 188/453 (41%), Positives = 271/453 (59%)
Query: 27 ELV-PHELKLFVLMNIRGLFESFSSEITLIIDQFDGLASNQIYRAADIYLGNKI------ 79
+LV P EL+L L + + FSS I I + DG+ +N++Y A +YL + +
Sbjct: 23 QLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVNTNELYNAVQLYLSSSVTVNDAV 82
Query: 80 SPSTKMFRVSMPEKENKMSIS--MAKNQEIVDHFDGVKLKWKQVT--RQVESTQYVSYTG 135
S S R+S+ N S++ ++ N I D F+GV + W+ V RQV+S +
Sbjct: 83 SSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTILWEHVVVQRQVQSFSW----- 137
Query: 136 QSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFG 195
M E R F L +K+ K VL+SY YI+ KS+ + N+ LY+ ++R
Sbjct: 138 --RPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYT----NSRGVS 191
Query: 196 LDS----WHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLY 251
LD+ W + F HP+TFDTLAM+ E KK I+EDL F + +Y++ G+AWKRGYLLY
Sbjct: 192 LDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLY 251
Query: 252 GPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLEL 311
GPPGTGKSSLIAAM+NYL +DIYDLEL+ V +NSELR++L+ T ++SI+V+EDIDCS+ L
Sbjct: 252 GPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSIIVIEDIDCSISL 311
Query: 312 EDR----------QAQPTTVNVLKPLRP-MQVTLSGLLNFLDGLWSSCGDERIIVFTTNH 360
R + P N P VTLSGLLNF DGLWS CG E+I VFTTNH
Sbjct: 312 TKRGKNKKKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEKIFVFTTNH 371
Query: 361 KDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGIT----DHPLIYEIKEIMQNVRV 416
++LD A++R GRMD+H++M +C L NYL + D ++ E++E ++ +
Sbjct: 372 IEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMDSVVLKEMEECVEEAEI 431
Query: 417 TPADVGEQLLKNE-DPEIALKGLLEFLNAKLIE 448
TPADV E L++N D E A++ ++ L ++++
Sbjct: 432 TPADVSEVLIRNRSDAEKAVREIVSVLKERVVK 464
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 177/427 (41%), Positives = 258/427 (60%)
Query: 27 ELVPHELKLFVLMNIRGLFESFSSEITLIIDQF--DGLASNQIYRAADIYLGNKISPSTK 84
+ VP + +V + S + + ++ +GL +Q Y + YL +K + K
Sbjct: 27 QYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYDSIRNYLASKSTALAK 86
Query: 85 MFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEI 144
+ + + + SM ++EI D F+GVK+KW V+ Q S GQ + E
Sbjct: 87 RLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYS---NVKVIQPQSNYGQ--RSSEER 141
Query: 145 RYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQD---HARRFGLDSWHW 201
R+F L+FH++H+ ++ +Y ++LR+ K+ N+ KLY+ N + R G W
Sbjct: 142 RHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPWRSG--KWSN 199
Query: 202 ITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL 261
+ F+HPATF+TLAM+ E K+ I +DL +F K KDYY++VGK WKRGYLL+GPPGTGKS++
Sbjct: 200 VPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTM 259
Query: 262 IAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLEL---------- 311
IAA++N+L++D+YDLEL+ V NSEL+++LL T ++SI+V+EDIDCSL+L
Sbjct: 260 IAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSLDLTGQRKKKKEE 319
Query: 312 -EDRQAQPTTVNVLKPL---RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPA 367
E+ + KP + +VTLSGLLN +DGLWS+C E+IIVFTTN D+LDPA
Sbjct: 320 DEEEDGEEKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPA 379
Query: 368 VLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLK 427
++R GRMD HI MSYC F LA NYL I H L EI+ ++ ++PADV E L+
Sbjct: 380 LIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMP 439
Query: 428 NEDPEIA 434
D E A
Sbjct: 440 KSDEEDA 446
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 521 (188.5 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 110/291 (37%), Positives = 178/291 (61%)
Query: 27 ELVPHELKLFVLMNIRGLFESFSSEITLIIDQFD---GLASNQIYRAADIYLGNKISPST 83
+ VP++++ ++ +F S+ + + ++ GL +Q Y YL +K +
Sbjct: 27 QFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIRNYLSSKSTARA 86
Query: 84 KMFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSE 143
+ + + + + +S+ ++ + D F GVK+ W S Q+ SE
Sbjct: 87 QRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVW--------SLSVWKSNDQADS--SE 136
Query: 144 IRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLN--QDH-ARRFGLDSWH 200
RY L+FH ++++ + +Y ++LR+ K +N+ KLY+ N QD+ A R G W
Sbjct: 137 KRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAWREG--RWS 194
Query: 201 WITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 260
+ F+HPATF+TLAM+ E K+ + +DL +F K KDYYR+VGK WKRGYLL+GPPGTGKS+
Sbjct: 195 NVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPPGTGKST 254
Query: 261 LIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLEL 311
+I+AM+N+L +D+YDLEL+ V NSEL++++L T +SI+V+EDIDCSL+L
Sbjct: 255 MISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDL 305
Score = 306 (112.8 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 70/152 (46%), Positives = 93/152 (61%)
Query: 294 TGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERI 353
TG R ED D E + ++A+ + R +VTLSGLLN +DGLWS+C E+I
Sbjct: 306 TGQRKKKKEEDEDEEEEEKKKEAEKLLKRE-RGERESKVTLSGLLNAIDGLWSACSGEKI 364
Query: 354 IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQN 413
IVFTTN+ D+LDPA++R GRMD HI MSYC F LA NYL I H L EIK +++
Sbjct: 365 IVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIESHDLFGEIKRLVEE 424
Query: 414 VRVTPADVGEQLLKN---EDPEIALKGLLEFL 442
++PADV E L+ +D +I L L++ L
Sbjct: 425 TDMSPADVAENLMPKSDEDDADICLTRLVKSL 456
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 162/389 (41%), Positives = 236/389 (60%)
Query: 44 LFESFSSEITLIIDQFDG--LASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISM 101
LF F I + ++ G ++ Y YL S K + + + + +SM
Sbjct: 43 LFGRFYPYIQITFHEYSGEHFKRSEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSM 102
Query: 102 AKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLN 161
+EI D F+G+++ W Q ++ + Q S+ ++ +E RY+ L FH++ ++ ++
Sbjct: 103 DDKEEITDDFEGIRVWW-QSKKEGATRQSFSFYPEA----NEKRYYMLRFHRRDREVIIE 157
Query: 162 SYFPYILRKSKSAQEENKTLKLYSLN--QDHARRFGLDSWHWITFNHPATFDTLAMEAEL 219
Y +++R+ K+ +++N+ KLYS Q H W +TF HPATFDTLAME
Sbjct: 158 RYLEHVMREGKTIEQKNRERKLYSNTPGQSHGNN---SKWSHVTFEHPATFDTLAMEENK 214
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS 279
K+ I DL +F K KDYY+++GKAWKRGYLL+GPPGTGKS++IAAM+N+L +D+YDLEL+
Sbjct: 215 KEEIKSDLIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELT 274
Query: 280 AVHSNSELRRVLLSTGNRSILVVEDIDCSLEL-------EDRQAQPTTVNVLKPLRPMQ- 331
V N+ LRR+L+ T +SI+V+EDIDCSL L E+ + N ++ M+
Sbjct: 275 TVKDNTHLRRLLIETSAKSIIVIEDIDCSLNLTGQRKKKEEEEEDGDDKNTIEKKMMMKN 334
Query: 332 --------VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
VTLSGLLNF+DGLWS+CG ERIIVFTTN D+LDPA++R GRMD HI MSYC
Sbjct: 335 EGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYC 394
Query: 384 TPCGFDTLAANYLGITDHPLIYEIKEIMQ 412
F LA NYL + + + EIK +++
Sbjct: 395 CFEAFKVLAKNYLDVEESEMFEEIKRLLE 423
Score = 319 (117.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/117 (56%), Positives = 83/117 (70%)
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDT 390
+VTLSGLLNF+DGLWS+CG ERIIVFTTN D+LDPA++R GRMD HI MSYC F
Sbjct: 342 KVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKV 401
Query: 391 LAANYLGITDHPLIYEIKEIMQ--NVRVTPADVGEQLL---KNEDPEIALKGLLEFL 442
LA NYL + + + EIK +++ +++TPADVGE LL + E E LK L+E L
Sbjct: 402 LAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLKRLIEAL 458
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 169/451 (37%), Positives = 259/451 (57%)
Query: 27 ELVPHELKLFVLMNIRG----LFESFSSEITLIIDQF--DGLASNQIYRAADIYLGNKIS 80
+ VP++L+ ++ I+ LF S+ + + ++ +GL+ ++ Y YL + +
Sbjct: 13 QFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSSIST 72
Query: 81 PSTKMFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKM 140
K + E + + + ++ +V F GV + W E ++K
Sbjct: 73 ARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSSTVVDKEDKH-------NSK- 124
Query: 141 QSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDS-W 199
E RY LTF H+D + N+Y ++LR+ K +N+ KLY+ N + + W
Sbjct: 125 --EGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLW 182
Query: 200 HWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKS 259
+ FNH A+F+TL M+ + K+ I +DL +F K KDYYR+V K WKRGYLL+GPPGTGKS
Sbjct: 183 SNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKS 242
Query: 260 SLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLEL-------- 311
++I+A++N+L +D+YDLEL+ V N+EL++++L T +SI+V+EDIDCSLEL
Sbjct: 243 TMISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKK 302
Query: 312 ---EDRQAQPTTVNVLKPL--RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDP 366
ED++ + N+ + VTLSGLLN +DGLWS+C DE+II+FTTN D LDP
Sbjct: 303 EEDEDKEEKKEAENLKRVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDP 362
Query: 367 AVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLL 426
A++R GRMD HI MSYC F LA NYL H L EI +++ V V+PADV E L+
Sbjct: 363 ALIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDVSPADVAENLM 422
Query: 427 KN---EDPEIALKGLLEFLNAKLIEGCESQA 454
+D +I + L++ L + + E +A
Sbjct: 423 PKSDEDDADICFRRLVKSLEEEKKKKIEKEA 453
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 157/363 (43%), Positives = 225/363 (61%)
Query: 52 ITLIIDQFDG--LASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVD 109
I + ++ G + +Y A YL S K + + + +SM ++EI D
Sbjct: 52 IQITFHEYSGERFKRSDVYDAIQSYLSKDSSSRAKKLTANTIKGNKSIILSMDDHEEITD 111
Query: 110 HFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILR 169
F GVK+ W+ Q ES + +S+ ++ E R++ L FH++ ++ + Y +++
Sbjct: 112 EFQGVKVWWQSKKHQSES-RAISFYPKA----DESRFYMLKFHRRDREVITKKYLNHVIS 166
Query: 170 KSKSAQEENKTLKLYSLN-QDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLE 228
+ K+ + +N+ KLYS N + + W +TF HPATFDTLAME + K+ I DL
Sbjct: 167 EGKTIEVKNRERKLYSNNPSQNWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLI 226
Query: 229 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELR 288
+F KDYY+++GKAWKRGYLL+GPPGTGKS++IAAM+N L +D+YDLEL+ V N+ELR
Sbjct: 227 KFSNSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELR 286
Query: 289 RVLLSTGNRSILVVEDIDCSLEL--------EDRQAQPTTVNVLKPLRPMQ-------VT 333
R+L+ T +SI+V+EDIDCSL+L ++ + + T + K ++ Q VT
Sbjct: 287 RLLIETSGKSIIVIEDIDCSLDLTGQRKQKKDEEEDEDETSPIEKQMKKDQGENKGSKVT 346
Query: 334 LSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAA 393
LSGLLNF+DGLWS+CG ERIIVFTTN D+LDPA++R GRMD HI MSYC F LA
Sbjct: 347 LSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLAN 406
Query: 394 NYL 396
NYL
Sbjct: 407 NYL 409
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 70/120 (58%), Positives = 84/120 (70%)
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDT 390
+VTLSGLLNF+DGLWS+CG ERIIVFTTN D+LDPA++R GRMD HI MSYC F
Sbjct: 344 KVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKV 403
Query: 391 LAANYLGIT---DHPLIYEIKEIMQ--NVRVTPADVGEQLLKN---EDPEIALKGLLEFL 442
LA NYL D+ L EIK +++ +++TPADVGE LLK E EI LK L+E L
Sbjct: 404 LANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVGENLLKKSEVETKEICLKRLIEAL 463
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 159/355 (44%), Positives = 229/355 (64%)
Query: 93 KENKMSISMAKNQ-EIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTF 151
KEN MS+ + ++ +I + ++GVK+ W ++ R V+ G+ + LTF
Sbjct: 100 KEN-MSLDLKRDDVKIEEEYEGVKMWW-EIFRCVK--------GK--------KICRLTF 141
Query: 152 HKQHKDKVLNSYFPYILRKSKSAQEENKTLKLY----SLNQDHARRFGLDSWHWITFNHP 207
H+ + D V SY Y++ + KS + K + + SLN + + GL W F HP
Sbjct: 142 HRSNWDVVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNWKTSMK-GL--WTCTEFEHP 198
Query: 208 ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
ATFDTLAM+ + K I DL F K+YY R+GKAWKRGYLLYGPPGTGKS++IAAM+N
Sbjct: 199 ATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
Query: 268 YLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPL 327
+ ++IYDLEL+++ +N EL+++L++T N+SI+V+EDIDCSL+L + +
Sbjct: 259 LMKYNIYDLELTSIGNNWELKKLLIATTNKSIIVIEDIDCSLDLTGEREVKDLKGDKEGK 318
Query: 328 RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCG 387
+ VTLSGLLNF+DG+WS+CG ERI+VFTTNH +LD A++R GRMD+HI +SYCT
Sbjct: 319 KSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTFGA 378
Query: 388 FDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFL 442
F LA NYL I H L EI+ +++ ++TPADV E ++ E + +LKGL+ L
Sbjct: 379 FKILAKNYLNIDSHHLFGEIESLLKETKITPADVAEHMMAKE-VDGSLKGLIRAL 432
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 132/238 (55%), Positives = 177/238 (74%)
Query: 215 MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIY 274
ME ELK +I DL+ F KD+++ VG+AWKRGYLLYGPPGTGKSSL+AA++N++N+ IY
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 275 DLELSAVHSNSELRRVLLSTGNRSILVVEDIDCS-------LELEDRQAQPTTVNVLKPL 327
DL++ +V ++ LR++L ST NRSIL++ED+DCS E +D N K
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGENQNKKKKK 120
Query: 328 RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCG 387
P +VTLSGLLNF+DGLWSSC +ERII+FTTNHK++LDPA+LRPGRMDVHI M YCTP
Sbjct: 121 DP-KVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIV 179
Query: 388 FDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLNAK 445
F LAA YL I +H L I+++ V+ TPA++ E+L+ ++DP++ LKGL+EFL +K
Sbjct: 180 FKKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESK 237
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 151/397 (38%), Positives = 227/397 (57%)
Query: 56 IDQF-DGLASNQIYRAADIYLGNKISPSTKMF-RVSMPEKENKMSISMAKNQEIVDHFDG 113
+ +F D + N +Y+ +YL + S F + +K N++ + + +NQ + D F G
Sbjct: 53 VPEFNDNVQENHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNEIILRLDRNQVVGDEFLG 112
Query: 114 VKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKS 173
++ W G+ + R F L K K ++L SY +I S
Sbjct: 113 ARVCW--------------INGED---EDGARNFVLKIRKADKRRILGSYLQHIHTVSDE 155
Query: 174 AQEENKTLKLYSLN---QDHARRFGLDSWHW--ITFNHPATFDTLAMEAELKKMIIEDLE 228
++ N LKL+ +N DH + + W I F+HP TFD +AME +LK + DLE
Sbjct: 156 LEQRNTELKLF-INVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLE 214
Query: 229 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELR 288
F+K K YY R+G+ WKR YLLYGP GTGKSS +AAM+N+L++D+YD++LS V +S+L+
Sbjct: 215 SFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLK 274
Query: 289 RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSC 348
+LL T +S++V+ED+D L + T VN LSG+LNF D + SSC
Sbjct: 275 MLLLQTRGKSVIVIEDLDRHLSTKS-----TAVN-----------LSGILNFTDSILSSC 318
Query: 349 -GDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEI 407
DERI+VFT K+++DPA+LRPGR+DVHI+ C F TLA NYLG+ +H L ++
Sbjct: 319 TADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNYLGVKEHKLFSQV 378
Query: 408 KEIMQN-VRVTPADVGEQLLKNED-PEIALKGLLEFL 442
+ I QN ++PA++GE ++ N + P ALK ++ L
Sbjct: 379 EGIFQNGASLSPAEIGELMIANRNSPTRALKHVINAL 415
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 63/164 (38%), Positives = 112/164 (68%)
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
F L F ++H+D V +SY P++ K+K + + + L++++ + H D+W +H
Sbjct: 107 FELRFDEKHRDLVFDSYIPFVESKAKEIKSKKRILEMHTYS--HC----CDTWETKILDH 160
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
++F+T+ M+ +LK+ +I+D++ F+ ++D+Y+RVG+ W R YLL+G PG GK+SL+AA++
Sbjct: 161 HSSFETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIA 220
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLE 310
YLNFD+Y++ V ++ + RR++ + SIL+VEDID SLE
Sbjct: 221 KYLNFDVYNIT-QGVKTDFDTRRLIRRVEDSSILLVEDIDTSLE 263
Score = 232 (86.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 63/170 (37%), Positives = 98/170 (57%)
Query: 281 VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNF 340
V ++ + RR++ + SIL+VEDID SLE +V LS LL+
Sbjct: 234 VKTDFDTRRLIRRVEDSSILLVEDIDTSLE------------------GSKVALSQLLSS 275
Query: 341 LDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITD 400
L WS+ G R+++FTTN+K+R D +L RM++ IYM +C F TLA+NYLGI+
Sbjct: 276 LTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKTLASNYLGISH 332
Query: 401 -----HPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLNAK 445
H L +IK ++ VTP V E+L+K++D ++AL+ L+ + ++K
Sbjct: 333 DNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRYSSSK 382
Score = 94 (38.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 95 NKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQ 154
+K+++ + +E D + G KLKW+ V+ G K + F L F ++
Sbjct: 67 DKINLDFVEEREFDDIYQGAKLKWRIF---VDKNNI----GNIPK-----QCFELRFDEK 114
Query: 155 HKDKVLNSYFPYILRKSKSAQEENKTLKLYS 185
H+D V +SY P++ K+K + + + L++++
Sbjct: 115 HRDLVFDSYIPFVESKAKEIKSKKRILEMHT 145
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 74/194 (38%), Positives = 118/194 (60%)
Query: 198 SW--HWITFNHPAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYG 252
+W W F HP + ++ +E+ +KKMI +D+ F++ +Y G ++RGYLLYG
Sbjct: 190 AWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYG 249
Query: 253 PPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVVEDIDCSLEL 311
PPG+GK+S + A++ L++DI L L+ ++ L +L + ++++++ED+D + +
Sbjct: 250 PPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQG 309
Query: 312 EDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRP 371
+R + V VT SGLLN LDG+ SS DERII TTNH ++LDPA++RP
Sbjct: 310 RERSGE---VGF-----HANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRP 359
Query: 372 GRMDVHIYMSYCTP 385
GR+DV Y+ TP
Sbjct: 360 GRVDVKAYLGNATP 373
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 81/235 (34%), Positives = 128/235 (54%)
Query: 201 WITFNHPAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTG 257
W F HP ++ ++ + II D + F+K +Y + G ++RGYLLYGPPG G
Sbjct: 177 WRPFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCG 236
Query: 258 KSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVVEDIDCSLELEDRQA 316
KSS I A++ L + + L LS ++ L +L +SI+++EDID + R+A
Sbjct: 237 KSSFITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAAFV--SREA 294
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDV 376
P + L ++T SGLLN LDG+ S+ + RI+ TTN+ DRLDPA++RPGR+D+
Sbjct: 295 TPQQKSAFDGLN--RITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDL 350
Query: 377 HIYMSYCTPCGFDTLAANYLGITDHPLIYEI-KEIMQNVR-VTPADVGEQLLKNE 429
Y+ YCT + + N+ +D E K + R +PA + +K++
Sbjct: 351 KEYIGYCTQYQLEEMFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGFFMKHK 405
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 107/336 (31%), Positives = 168/336 (50%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R E TG T +S +TF D+ + F IL
Sbjct: 103 NHFIWYQGKWIRVERSREMQMIDLQTG--TPWES------VTFTALGTDRKI---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
+++ QEE KT+ +Y+ R FG + P +++ +E L I+
Sbjct: 152 EEARELALQQEEGKTV-MYTAVGSEWRPFG-----YPRRRRP--LNSVVLEQGLADRIVR 203
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSN 284
D+ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ + S+
Sbjct: 204 DIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSD 263
Query: 285 SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGL 344
L +L +S++++ED+D + D A+ N +K ++T SGLLN LDG+
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE----NPVKYQGLGRLTFSGLLNALDGV 319
Query: 345 WSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAAN-YLGITDHPL 403
S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+ +C+ + Y G P
Sbjct: 320 AST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQLTQMFQRFYPG--QAPS 375
Query: 404 IYEI---KEIMQNVRVTPADV-GEQLLKNEDPEIAL 435
+ E + + +++PA V G +L DPE A+
Sbjct: 376 LAESFADRALQATTQISPAQVQGYFMLYKNDPEGAV 411
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 118/410 (28%), Positives = 199/410 (48%)
Query: 63 ASNQIYRA--ADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVDHFDG-VKLKWK 119
AS +YR D+ + +K S F M + ++S ++ + H +G V K+
Sbjct: 75 ASRVLYRQMIVDLEIQSK-DKSYAWFLTWMAKHPQRVSRHLSVRTNYIQHDNGSVSTKFS 133
Query: 120 QVTRQVESTQYVSYTG--------QSTKM---QSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
V ++ Y G +S KM + + +T ++DK L F IL
Sbjct: 134 LVPGP--GNHWIRYKGAFILIKRERSAKMIDIANGSPFETVTLTTLYRDKHL---FDDIL 188
Query: 169 RKSKSAQ---EENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT---FDTLAMEAELKKM 222
++K E KT+ +Y+ FG + W F P ++ +++ +K+
Sbjct: 189 NEAKDIALKTTEGKTV-IYT-------SFGPE---WRKFGQPKAKRMLPSVILDSGIKEG 237
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH 282
I++D+ F+K +Y G ++RGYLLYGPPG+GK+S I A++ L+++I L LS +
Sbjct: 238 ILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENN 297
Query: 283 -SNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFL 341
++ L ++ + RSIL++EDID + + + + VT SGLLN L
Sbjct: 298 LTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQGFHS--------SVTFSGLLNAL 349
Query: 342 DGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAAN-YLGITD 400
DG+ SS +E I TTNH ++LD A++RPGR+D +++ TP + + Y G TD
Sbjct: 350 DGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETD 407
Query: 401 --HPLIYEIKEIMQNVRVTPADVGEQLLKNED-PEIALKGLLEFLNAKLI 447
+ +KE+ ++ V+ A + + N+D P ALK + NA I
Sbjct: 408 ICKKFVNSVKEL--DITVSTAQLQGLFVMNKDAPHDALKMVSSLRNANHI 455
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 324 (119.1 bits), Expect = 5.9e-29, P = 5.9e-29
Identities = 89/275 (32%), Positives = 146/275 (53%)
Query: 187 NQDHARRFGLDSWHWITFNHPA---TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKA 243
N+ + D+ W F P T D++ ++ +K+ I+ED++ F+ + +Y G
Sbjct: 223 NEGKTTIYRADTATWTPFGDPRRKRTLDSVILDKGVKERIVEDVKDFLATESWYHDRGIP 282
Query: 244 WKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVV 302
++RGYLLYGPPGTGKSS I A++ L++DI L LS ++ L R+L R+++++
Sbjct: 283 YRRGYLLYGPPGTGKSSFIQAVAGELDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLL 342
Query: 303 EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKD 362
ED+D + +R+ Q R VT SGLLN LDG+ S+ +ERI+ TTNH +
Sbjct: 343 EDVDAAFS--NRRTQTDEDGY----RGANVTFSGLLNALDGVASA--EERIVFLTTNHVE 394
Query: 363 RLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYE--IKEIMQNVRVTPAD 420
RLD A++RPGR+D+ + + T + G D Y+ E + + + +
Sbjct: 395 RLDEALVRPGRVDMTVRIGELTRYQATCFWERFYGDLDSTGSYKQAFLERLYELGLIENE 454
Query: 421 VGEQLLKNEDPEIA-LKGLLEFLNAKLIEGCESQA 454
GE+L + A L+GL + N ++G + A
Sbjct: 455 NGERLDPPQSTSAAALQGLFLY-NKGNMQGAIAMA 488
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 100/333 (30%), Positives = 164/333 (49%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R E Q +Q+ + ++TF D+ + F IL
Sbjct: 103 NHFIWYQGKWIRVERNREM--------QMVDLQTGTPWESVTFTALGTDRKV---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT---FDTLAMEAELKKM 222
++++ QEE KT+ ++ + W TF +P D++ ++ L
Sbjct: 152 EEARALALQQEEGKTVMYTAVGSE-----------WRTFGYPRRRRPLDSVVLQQGLADR 200
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AV 281
I++D+ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ +
Sbjct: 201 IVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSS 260
Query: 282 HSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFL 341
S+ L +L +S++++ED+D + D + N +K ++T SGLLN L
Sbjct: 261 LSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVE----NPVKYQGLGRLTFSGLLNAL 316
Query: 342 DGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDH 401
DG+ S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+ YC+ + +
Sbjct: 317 DGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAP 374
Query: 402 PLIYEIKE--IMQNVRVTPADV-GEQLLKNEDP 431
L E + +++PA V G +L DP
Sbjct: 375 SLAENFAEHVLKATSQISPAQVQGYFMLYKNDP 407
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 80/247 (32%), Positives = 134/247 (54%)
Query: 201 WITFNHPAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTG 257
WI F P +++ ++ + + ++ED + F+ +Y G ++RGYL YGPPGTG
Sbjct: 196 WIRFGVPRKKRDIESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTG 255
Query: 258 KSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGN-RSILVVEDIDCS-LELEDRQ 315
KSS I+A++++ + + L LS + + LL+T S++++EDID + + ED
Sbjct: 256 KSSFISALASHFGYSVCLLSLSERTLDDDRLNHLLNTAPPNSVVILEDIDAAFVSREDPM 315
Query: 316 AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ L +VT SGLLN LDG+ +C +ER+ TTN+ +RLDPA++RPGR+D
Sbjct: 316 SNHPAYQGLS-----RVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVD 368
Query: 376 VHIYMSYCTPCGFDTLAAN-YLGITDHPLIYE-IKEIMQN-VRVTPADV-GEQLLKNEDP 431
Y T + + Y +D L E +K + ++ ++PA + G L+ +DP
Sbjct: 369 RKQYFGNATDGMLSKMFSRFYRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDP 428
Query: 432 EIALKGL 438
AL +
Sbjct: 429 RAALDNI 435
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 108/336 (32%), Positives = 167/336 (49%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R E TG T +S +TF D+ + F IL
Sbjct: 103 NHFIWYQGKWIRVERSREMQMIDLQTG--TPWES------VTFTALGTDRKV---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
+++ QEE KT+ +Y+ R FG + P T ++ + L I+
Sbjct: 152 EEARELALQQEEGKTV-MYTAMGSEWRPFG-----YPRRRRPLT--SVVLGQGLADRIVR 203
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSN 284
D+ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ + S+
Sbjct: 204 DVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263
Query: 285 SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGL 344
L +L +S++++ED+D + D A+ N +K ++T SGLLN LDG+
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE----NPVKYQGLGRLTFSGLLNALDGV 319
Query: 345 WSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAAN-YLGITDHPL 403
S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+ YC+ + Y G P
Sbjct: 320 AST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQMFQRFYPG--QAPS 375
Query: 404 IYEI--KEIMQ-NVRVTPADV-GEQLLKNEDPEIAL 435
+ E ++Q +++PA V G +L DP A+
Sbjct: 376 LAEAFAGRVLQVTTQISPAQVQGYFMLYKNDPAGAI 411
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 104/335 (31%), Positives = 168/335 (50%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R E TG T +S +TF D+ + F IL
Sbjct: 103 NHFIWYQGKWIRVERSREMQMIDLQTG--TPWES------VTFTALGTDRKV---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
+++ QEE KT+ +Y+ R FG + P +++ +E + + I+
Sbjct: 152 EEARELALQQEEGKTV-MYTAVGSEWRPFG-----YPRRRRP--LNSVVLEQGVTERIVR 203
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSN 284
D+ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ + S+
Sbjct: 204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSD 263
Query: 285 SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGL 344
L +L +S++++ED+D + D A+ N +K ++T SGLLN LDG+
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE----NPIKYQGLGRLTFSGLLNALDGV 319
Query: 345 WSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAAN-YLG-ITDHP 402
S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+ +C+ + Y G T
Sbjct: 320 AST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLA 377
Query: 403 LIYEIKEIMQNVRVTPADV-GEQLLKNEDPEIALK 436
+ + + +++PA V G +L DP A++
Sbjct: 378 ENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQ 412
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 104/332 (31%), Positives = 167/332 (50%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R E TG T +S +TF D+ + F IL
Sbjct: 103 NHFIWYRGKWIRVERSREMQMIDLQTG--TPWES------VTFTALGTDRKV---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
+++ QEE KT+ +Y+ R FG + P +++ ++ L I+
Sbjct: 152 EEARELALQQEEGKTV-MYTAVGSEWRPFG-----YPRRRRP--LNSVVLQQGLADRIVR 203
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSN 284
D++ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ + S+
Sbjct: 204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263
Query: 285 SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGL 344
L +L +S++++ED+D + D + N +K ++T SGLLN LDG+
Sbjct: 264 DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVE----NPVKYQGLGRLTFSGLLNALDGV 319
Query: 345 WSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAAN-YLGITDHPL 403
S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+ YC+ + Y G P
Sbjct: 320 AST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG--QAPS 375
Query: 404 IYE--IKEIMQNV-RVTPADV-GEQLLKNEDP 431
+ E + +++ +++PA V G +L DP
Sbjct: 376 LAENFAEHVLRATNQISPAQVQGYFMLYKNDP 407
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 98/333 (29%), Positives = 163/333 (48%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW +V R + Q +Q+ + ++TF D+ + F IL
Sbjct: 103 NHFIWYQGKWIRVERNRDM--------QMVDLQTGTPWESVTFTALGTDRKV---FFNIL 151
Query: 169 RKSKSA---QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT---FDTLAMEAELKKM 222
++++ QEE KT+ ++ + W TF +P D++ ++ L
Sbjct: 152 EEARALALQQEEGKTVMYTAVGSE-----------WRTFGYPRRRRPLDSVVLQQGLADR 200
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AV 281
I++D+ F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L L+ +
Sbjct: 201 IVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSS 260
Query: 282 HSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFL 341
S+ L +L +S++++ED+D + D + N +K ++T SGLLN L
Sbjct: 261 LSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVE----NPIKYQGLGRLTFSGLLNAL 316
Query: 342 DGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDH 401
DG+ S+ + RI+ TTN+ DRLDPA++RPGR+D+ Y+ YC+ + +
Sbjct: 317 DGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAP 374
Query: 402 PLIYEIKE--IMQNVRVTPADV-GEQLLKNEDP 431
L E + ++PA V G +L DP
Sbjct: 375 SLAENFAEHVLKATSEISPAQVQGYFMLYKNDP 407
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 102/334 (30%), Positives = 170/334 (50%)
Query: 117 KWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSA-- 174
KW +V R E +TG T +S +TF +D+ ++F IL++++
Sbjct: 111 KWIRVERVREKQMMDLHTG--TPWES------VTFTALGRDR--QTFFN-ILQEARELAL 159
Query: 175 -QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKR 233
QEE +T+ +Y+ R FG P + ++ +E+ + + I++D++ F+
Sbjct: 160 KQEEGRTV-MYTAMGAEWRPFGFPRRR-----RPLS--SVVLESGVAERIVDDVKEFIGN 211
Query: 234 KDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLL 292
+Y G ++RGYLLYGPPG GKSS I A++ L + I + LS S+ L +L
Sbjct: 212 PKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLS 271
Query: 293 STGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDER 352
+SI+++ED+D + R+ PT N L ++T SGLLN LDG+ SS + R
Sbjct: 272 VAPQQSIILLEDVDAAFV--SRELLPTE-NPLAYQGMGRLTFSGLLNALDGVASS--EAR 326
Query: 353 IIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYL-----GITDHPLIYEI 407
I+ TTN +RLDPA++RPGR+D+ Y+ +C+ + + DH +
Sbjct: 327 IVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADH---FSE 383
Query: 408 KEIMQNVRVTPADV-GEQLLKNEDPEIALKGLLE 440
+ + + ++ A V G +L DP A+K + E
Sbjct: 384 QALAAHTDLSAAQVQGHFMLYKTDPAGAIKNIAE 417
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 317 (116.6 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 85/286 (29%), Positives = 151/286 (52%)
Query: 148 NLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHP 207
++T + +K+ ++NS + S + ++ KT K+YSL+Q F W I +
Sbjct: 194 DVTVYGGNKN-IINSILETAVEYSVTLNKD-KT-KIYSLDQSST--F----WECIACQNK 244
Query: 208 ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
D++ ++ + + ++ DL F+ K +Y G ++RGYLLYGPPG+GK+S I +M+
Sbjct: 245 RLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAG 304
Query: 268 YLNFDIYDLELS-AVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKP 326
I + +S +H + + ++ +ILV+EDID ++ ++ + +VL
Sbjct: 305 NFGKSISIMNMSKGIHDGN-IHSIIQKCNKDTILVLEDID-AVFVKRKNNSAAGNDVL-- 360
Query: 327 LRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPC 386
T SGLLN +DGL SS D RI++ TTNH +RL PA++RPGR+D+ + Y +
Sbjct: 361 ------TFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNH 412
Query: 387 GFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADV-GEQLLKNEDP 431
+ + + H LI I ++N +++ A + G ++ P
Sbjct: 413 QIELMFKRFFDQKYHYLIDSINSKLENHQISTAQLQGWFIIHRNSP 458
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 306 (112.8 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 81/243 (33%), Positives = 132/243 (54%)
Query: 200 HWITFNHPATFDTLA---MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGT 256
+W F +P + +L+ + +LK +IED++ F+ + +YR G ++RGYLLYG PG
Sbjct: 173 NWERFGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGN 232
Query: 257 GKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVVEDIDCSLELEDRQ 315
GKSSLI A++ LN DI + LS+ + ++ +L + +SIL++EDID + +
Sbjct: 233 GKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDN 292
Query: 316 AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
N +T SGLLN LDG+ S G RI+ TTN + LD A++R GR+D
Sbjct: 293 VDSNNNN---SNNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRID 347
Query: 376 VHIYMSYCTPCGFDTLAANYLGI-TDHPLIYEIKEIMQNVRVTPADVGEQLLKN-EDPEI 433
+ I +S T L ++ + TD+ L E + + +++ + + LLK PE
Sbjct: 348 LKIKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLKYINSPEK 407
Query: 434 ALK 436
A++
Sbjct: 408 AIE 410
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 305 (112.4 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 88/278 (31%), Positives = 144/278 (51%)
Query: 109 DHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
+HF + KW ++ R E TG T +S + + L +++ +L
Sbjct: 103 NHFIWYQKKWIRIERNRERQMIDLNTG--TAWES-VTFTALGTNREIFFNILQE-----A 154
Query: 169 RKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLE 228
R+ Q+E +T+ +Y+ R+FG P + ++ +E + + ++ED++
Sbjct: 155 RELALQQQEGRTI-MYTAMGTEWRQFGFPRRR-----RPLS--SVVLEKGVSERLVEDVK 206
Query: 229 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELR 288
F+ +Y G ++RGYLLYGPPG GKSS I A++ L I L LS + +
Sbjct: 207 EFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRL 266
Query: 289 RVLLSTG-NRSILVVEDIDCSLELEDRQAQ-PTTVNVLKPLRPMQVTLSGLLNFLDGLWS 346
LLS +SI+++ED+D + D A+ P + L T SGLLN LDG+ S
Sbjct: 267 NYLLSVAPQQSIILLEDVDAAFVSRDLAAENPAMYQGMGRL-----TFSGLLNALDGVAS 321
Query: 347 SCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
+ + RI+ TTN+ DRLDPA++RPGR+D+ Y+ +C+
Sbjct: 322 T--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCS 357
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 212 (79.7 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 53/154 (34%), Positives = 86/154 (55%)
Query: 175 QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT---FDTLAMEAELKKMIIEDLERFV 231
+EE KTL +Y+ G D W F HP ++ ++ ++II+D+++F+
Sbjct: 179 KEEGKTL-IYT-------SMGTD---WRRFGHPRRKRPISSVILDKGKSELIIQDVKKFL 227
Query: 232 KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRV 290
D+Y G ++RGYLLYGPPGTGKSS I A++ L I L L+ S++ L ++
Sbjct: 228 NNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQL 287
Query: 291 LLSTGNRSILVVEDIDCSLEL--EDRQAQPTTVN 322
L + RSI+++EDID +++ D A+ + N
Sbjct: 288 LATAPQRSIILLEDIDSAIQTGNHDLSAKSNSAN 321
Score = 153 (58.9 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTL 391
+T SGLLN LDG+ +S G RI+ TTNH ++LD ++RPGR+D+ I + C+ + +
Sbjct: 348 LTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQM 405
Query: 392 AANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEI-ALKGLLEFL 442
+ TD L + E ++N + +PA + + + I A+ L E +
Sbjct: 406 FLKFYP-TDFDLAKQFVEKLENYKFSPAQLQAYFMTYSNNSIEAINNLNELI 456
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 297 (109.6 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 77/213 (36%), Positives = 120/213 (56%)
Query: 175 QEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRK 234
Q+E +T+ +Y+ R+FG P + ++ +E + + ++ED++ F+
Sbjct: 161 QQEGRTI-MYTAMGTEWRQFGFPRRR-----RPLS--SVVLEKGVSERLVEDVKEFIDNP 212
Query: 235 DYYRRVGKA-WKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLS 293
+Y GKA +RGYLLYGPPG GKSS I A++ L I L LS + + LLS
Sbjct: 213 KWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLNYLLS 272
Query: 294 TG-NRSILVVEDIDCSLELEDRQAQ-PTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDE 351
+SI+++ED+D + D A+ P + L T SGLLN LDG+ S+ +
Sbjct: 273 VAPQQSIILLEDVDAAFVSRDLAAENPAMYQGMGRL-----TFSGLLNALDGVAST--EA 325
Query: 352 RIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
RI+ TTN+ DRLDPA++RPGR+D+ Y+ +C+
Sbjct: 326 RIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCS 358
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 288 (106.4 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 69/193 (35%), Positives = 111/193 (57%)
Query: 198 SW--HWITFNHPAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYG 252
SW W F P + ++ ++ + + I+ D++ F+ ++Y + G ++RGYLLYG
Sbjct: 195 SWGPEWRPFGQPRSKRLLGSVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYG 254
Query: 253 PPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVVEDIDCSLEL 311
PPG+GK+S I A++ L+++I L LS + ++ L ++ NRSIL++ED+D +
Sbjct: 255 PPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNHIPNRSILLLEDVDAAFNK 314
Query: 312 EDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRP 371
+ Q N VT SGLLN LDG+ S+ +E I TTNH ++LDPA+LRP
Sbjct: 315 RE-QTNDQGFN-------NGVTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRP 364
Query: 372 GRMDVHIYMSYCT 384
GR+D + + T
Sbjct: 365 GRVDYKVMIDNAT 377
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 287 (106.1 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 97/363 (26%), Positives = 177/363 (48%)
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
+ M ++NK ++ + + +H + V R + +S +S ++ I+
Sbjct: 108 KTQMTNEKNKKNVLFSFLPSVGNHLLFYDNHFIFVERSRDKNM-ISEVNRSMPFEN-IKL 165
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
+ K +K+LN YI +K EE KTL +Y + FG + W F +
Sbjct: 166 STFIWSKYVFEKILNDAKVYIEKK-----EEGKTL-VY-------KSFGPE---WRPFGN 209
Query: 207 PAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 263
P +++ + L + II D++ F+ +Y G ++R YLL+GPPG GKSSLI
Sbjct: 210 PKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLIT 269
Query: 264 AMSNYLNFDIYDLELSAVHSNSELRRVLLST-GNRSILVVEDID--------CSLELEDR 314
A++ Y +F+I + ++ ++ + LL+T ++IL++EDID D+
Sbjct: 270 ALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNNDQ 329
Query: 315 QAQP-----TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVL 369
+ T N ++ + V+ SGLLN LDG+ ++ +ERII TTN+ ++L P ++
Sbjct: 330 NSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLI 387
Query: 370 RPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNE 429
RPGR+D+ I + Y + + + H L + +I Q+ ++ A++ L ++
Sbjct: 388 RPGRVDMKILIPYANIYQYKKMFLRFFP-EHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
Query: 430 -DP 431
DP
Sbjct: 447 VDP 449
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 287 (106.1 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 97/363 (26%), Positives = 177/363 (48%)
Query: 87 RVSMPEKENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRY 146
+ M ++NK ++ + + +H + V R + +S +S ++ I+
Sbjct: 108 KTQMTNEKNKKNVLFSFLPSVGNHLLFYDNHFIFVERSRDKNM-ISEVNRSMPFEN-IKL 165
Query: 147 FNLTFHKQHKDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNH 206
+ K +K+LN YI +K EE KTL +Y + FG + W F +
Sbjct: 166 STFIWSKYVFEKILNDAKVYIEKK-----EEGKTL-VY-------KSFGPE---WRPFGN 209
Query: 207 PAT---FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 263
P +++ + L + II D++ F+ +Y G ++R YLL+GPPG GKSSLI
Sbjct: 210 PKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLIT 269
Query: 264 AMSNYLNFDIYDLELSAVHSNSELRRVLLST-GNRSILVVEDID--------CSLELEDR 314
A++ Y +F+I + ++ ++ + LL+T ++IL++EDID D+
Sbjct: 270 ALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNNDQ 329
Query: 315 QAQP-----TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVL 369
+ T N ++ + V+ SGLLN LDG+ ++ +ERII TTN+ ++L P ++
Sbjct: 330 NSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLI 387
Query: 370 RPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNE 429
RPGR+D+ I + Y + + + H L + +I Q+ ++ A++ L ++
Sbjct: 388 RPGRVDMKILIPYANIYQYKKMFLRFFP-EHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
Query: 430 -DP 431
DP
Sbjct: 447 VDP 449
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 287 (106.1 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 72/211 (34%), Positives = 116/211 (54%)
Query: 194 FGLDSWHWITFNHPATFDTLA---MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLL 250
+ + W P LA E LK+ I+ED++ F+ R +Y G ++R YLL
Sbjct: 218 YNIQGMSWAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYLL 277
Query: 251 YGPPGTGKSSLIAAMSNYLNFDIYDLEL-SAVHSNSELRRVLLSTGNRSILVVEDIDCSL 309
+GPPG+GKSS I A++ L++++ + L ++ +L +L+ RSIL++ED+D +
Sbjct: 278 HGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDDKLANMLMRLPPRSILLLEDVDVAF 337
Query: 310 ELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVL 369
++ P + VT SGLLN LDG+ + G++RI TTN+ +RLDPA++
Sbjct: 338 G-NRQEMSPDGYS------GATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALI 388
Query: 370 RPGRMDVHIYMSYCTPCGFDTLAANYLGITD 400
RPGR+DV + + TP L + + G D
Sbjct: 389 RPGRVDVKVRVGEATPEQAAELWSRFYGDVD 419
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 249 (92.7 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 305 IDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRL 364
+D E +D N K P QV+LSGLL F+DGLWS+ +ERII+FTTNHK++L
Sbjct: 1 MDFRKENKDEGGNGEKQNKKKKNDP-QVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKL 59
Query: 365 DPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGI 398
DPA LRPG+MDVHI M YCTP F L A YL I
Sbjct: 60 DPAFLRPGKMDVHILMDYCTPVVFKKLDALYLDI 93
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 173 (66.0 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 41/138 (29%), Positives = 73/138 (52%)
Query: 174 AQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFV-- 231
A+++N T+ +Y + H + W P T+ ++ K I+D++ ++
Sbjct: 242 AKDKNNTV-IY---RGH-KSGSYTEWSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHP 296
Query: 232 KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRV 290
+ + +Y G ++RGYLL+GPPGTGK+SL A + L ++Y L LS+ EL +
Sbjct: 297 RTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMAL 356
Query: 291 LLSTGNRSILVVEDIDCS 308
R I+++ED+DC+
Sbjct: 357 FTDLPTRCIVLLEDVDCA 374
Score = 143 (55.4 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
V+LSGLLN +DG+ ++C + RI+V TTNH ++LDPA++RPGR+D+ I + T
Sbjct: 422 VSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDPALVRPGRIDLSIAFGHST 472
Score = 51 (23.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 203 TFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 262
T + TF+T M+ L LE F+ R+ + + L P LI
Sbjct: 6 TMANATTFNTTPMQTLLNPSDTALLETFIPGYSMASRILSTYLQIDLSSYIPYLIFMGLI 65
Query: 263 AAMSNYLNFDIYDLELSAVHSNSELR 288
AA + Y+ +Y+L S +E+R
Sbjct: 66 AATARYIYSQLYNLFQEHCISTAEIR 91
Score = 43 (20.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 160 LNSYFPYILRKSKSAQEENKTL-KLYSLNQDH 190
L+SY PY++ A +LY+L Q+H
Sbjct: 52 LSSYIPYLIFMGLIAATARYIYSQLYNLFQEH 83
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 256 (95.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 67/197 (34%), Positives = 109/197 (55%)
Query: 200 HW-ITFNHPAT-FDTLAMEAELKKMIIEDLERFVK--RKDYYRRVGKAWKRGYLLYGPPG 255
HW T P T+ + ++KK +I D+ ++ +D+Y + G ++RGYLL+GPPG
Sbjct: 241 HWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFYHQRGIPYRRGYLLHGPPG 300
Query: 256 TGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDC-------S 308
TGK+SL A+++ ++Y L + ++ ++ EL + R I+++EDID
Sbjct: 301 TGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELPPRCIILLEDIDAVGIPRRNE 360
Query: 309 LE-----LEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDR 363
L L+D+ + + TLSGLLN LDG+ S G RI+ T+N D+
Sbjct: 361 LAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDGVASQEG--RIVFMTSNLADK 418
Query: 364 LDPAVLRPGRMDVHIYM 380
LDPA++RPGR+D I++
Sbjct: 419 LDPALVRPGRIDRKIFL 435
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 237 (88.5 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 62/198 (31%), Positives = 104/198 (52%)
Query: 199 WHWITFNHPATFDTLAMEAELKKMIIEDLERFVKR--KDYYRRVGKAWKRGYLLYGPPGT 256
W+ IT T+ +++ KK +++D+ +++ + +Y G ++RGYL GPPGT
Sbjct: 204 WNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGT 263
Query: 257 GKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLSTGNRSILVVEDIDCS-LELEDR 314
GK+SL +A++ DIY L L + S S R+ + ++++EDID + + L+
Sbjct: 264 GKTSLSSALAGVFGLDIYVLSLLDPNISESHFLRLFSEVPTQCVVLLEDIDAAGMTLKRA 323
Query: 315 QAQPTTVN------VLK----PLRPMQV---TLSGLLNFLDGLWSSCGDE-RIIVFTTNH 360
+P T + V+K P P+ T L L+ + E RI++ TTN
Sbjct: 324 NEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEGRILIMTTNA 383
Query: 361 KDRLDPAVLRPGRMDVHI 378
LDPA++RPGR+D+HI
Sbjct: 384 PQDLDPALIRPGRVDMHI 401
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 215 (80.7 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 51/178 (28%), Positives = 91/178 (51%)
Query: 60 DGLASNQIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVDHFDGVKLKWK 119
+GL ++ + YL K + + + +K + +S+ ++ + D F GVK+KW
Sbjct: 55 EGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLVLSLDDHETVEDVFQGVKVKWS 114
Query: 120 QVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSAQEENK 179
R+ Q S T + K +E RY L+FH +H++ + +Y ++LR+ K + +
Sbjct: 115 SSVRE---NQNQSSTNRD-KGFAERRYLTLSFHSRHREMITTTYLDHVLREGKEIGLKKR 170
Query: 180 TLKLYSLNQDH---ARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRK 234
KLY+ N H + R G + W ++F+HPAT +T AM+ E K + E + KR+
Sbjct: 171 ERKLYTNNSSHEWISWRLGTN-WSNVSFDHPATLETFAMDPEKNKA---EKEAWKKRR 224
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 162 (62.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 179 KTLKLYSLNQDHARRFGLDSWHWITFNHPAT-FDTLAMEAELKKMIIEDLERFVKRKD-- 235
KTL + N RR G SW + N P +T+ ++ + K ++ D+ +++ +
Sbjct: 252 KTL-IKRPNSSLIRRHGRHSWTSVA-NRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPR 309
Query: 236 YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNSELRRVLLST 294
+Y G +RGYL +GPPGTGK+SL A++ DIY + L S +L +
Sbjct: 310 WYANRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCL 369
Query: 295 GNRSILVVEDID 306
R ++++EDID
Sbjct: 370 PRRCVVLLEDID 381
Score = 120 (47.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
++LSGLLN +DG+ S G R+++ TTN + LD A++RPGR+D+ + S T
Sbjct: 442 ISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFSNAT 492
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 169 (64.5 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 110 HFDGVKLKWKQVTRQVESTQYVSYTG-QSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYIL 168
H + K+ + RQ S S TG ++ ++ + + TF + + + +
Sbjct: 172 HIFSFQGKYFSIDRQQRSVMDNSNTGSEAVTIREKETFIISTFGLSPEP--IKQFLAHA- 228
Query: 169 RKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLE 228
RK +KTL + N RRF +W + T+ ++ E K ++ D+
Sbjct: 229 RKHHHKDHGDKTL-IMRPNSLPQRRFHDRAWREVAKRPVRPISTVVLDQEQKTAVLSDMN 287
Query: 229 RFVKRKD--YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH-SNS 285
+++ K +Y G +RGYL +GPPGTGK+SL A++ +IY + L S+
Sbjct: 288 EYLQPKTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLEIYVISLIEPQLSDE 347
Query: 286 ELRRVLLSTGNRSILVVEDID 306
+L + R I+++EDID
Sbjct: 348 DLSTLFNGLPRRCIVLLEDID 368
Score = 99 (39.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+++SGLLN +DG+ + G RI + TTN + LD A++R GR+D+ +
Sbjct: 413 ISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQV 457
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 190 (71.9 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 48/121 (39%), Positives = 71/121 (58%)
Query: 244 WKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSNSELRRVLLSTGNRSILVV 302
++RGYLLYGPPG GKSS I A++ L I L L+ + S+ L +L +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 303 EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKD 362
ED+D + D + N +K ++T SGLLN LDG+ S+ + RI+ TTNH D
Sbjct: 64 EDVDAAFLSRDLAVE----NPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVD 117
Query: 363 R 363
R
Sbjct: 118 R 118
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 182 (69.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 55/176 (31%), Positives = 94/176 (53%)
Query: 262 IAAMSNYLNFDIYDLELS-AVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTT 320
+ +++ L I L L+ + S+ L +L +S++++ED+D + D +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVE--- 78
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
N +K ++T SGLLN LDG+ S+ + RI+ TTNH DRLDPA++RPGR+D+ Y+
Sbjct: 79 -NPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYV 135
Query: 381 SYCTPCGFDTLAAN-YLGITDHPLIYE--IKEIMQNV-RVTPADV-GEQLLKNEDP 431
YC+ + Y G P + E + +++ +++PA V G +L DP
Sbjct: 136 GYCSHWQLTQMFQRFYPG--QAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDP 189
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 189 (71.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 55/148 (37%), Positives = 85/148 (57%)
Query: 237 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN--SELRRVLLST 294
Y+RVG +G LLYGPPGTGK+ L AM++ +N + + +SA+ E R++
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 295 GNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSS 347
N + I+ +++ID + R+ +Q T+ + R +Q TL LLN LDG +
Sbjct: 223 FNYAKEHQPCIIFMDEIDA---IGGRRFSQGTSAD-----REIQRTLMELLNHLDG-FEE 273
Query: 348 CGDERIIVFTTNHKDRLDPAVLRPGRMD 375
G+ +II+ TN D LDPA++RPGR+D
Sbjct: 274 LGNVKIIM-ATNRPDVLDPALVRPGRLD 300
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 189 (71.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 55/148 (37%), Positives = 85/148 (57%)
Query: 237 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN--SELRRVLLST 294
Y+RVG +G LLYGPPGTGK+ L AM++ +N + + +SA+ E R++
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 295 GNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSS 347
N + I+ +++ID + R+ +Q T+ + R +Q TL LLN LDG +
Sbjct: 223 FNYAKEHQPCIIFMDEIDA---IGGRRFSQGTSAD-----REIQRTLMELLNHLDG-FEE 273
Query: 348 CGDERIIVFTTNHKDRLDPAVLRPGRMD 375
G+ +II+ TN D LDPA++RPGR+D
Sbjct: 274 LGNVKIIM-ATNRPDVLDPALVRPGRLD 300
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 177 (67.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 66/199 (33%), Positives = 95/199 (47%)
Query: 194 FGLDSWHWITFNHPAT----FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYL 249
FG+ FNH F +A E K+ I+E + +F+K +Y R+G RG +
Sbjct: 275 FGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFV-KFLKNPKFYERLGAKIPRGAI 333
Query: 250 LYGPPGTGKSSLIAAMSNYLNFDIYD------LELSAVHSNSELRRVLLSTGNRS---IL 300
L GPPGTGK+ L A + N LE+ S +R L +T ++ I+
Sbjct: 334 LSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRD-LFATARKNAPCII 392
Query: 301 VVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFT-TN 359
+++ID + R Q + + + TL+ LL +DG SS E I+VF TN
Sbjct: 393 FIDEIDAIGKARGRGGQFGSND------ERESTLNQLLVEMDGFTSS---EHIVVFAGTN 443
Query: 360 HKDRLDPAVLRPGRMDVHI 378
D LDPA+LRPGR D I
Sbjct: 444 RPDVLDPALLRPGRFDRQI 462
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/168 (33%), Positives = 93/168 (55%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL 276
AE + + E +E + + ++RVG +G LL+GPPGTGK+ L A+++ L+ + +
Sbjct: 156 AEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKV 215
Query: 277 ELSAVHSN--SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPL 327
SA+ E R++ N + I+ +++ID + R+ ++ T+ +
Sbjct: 216 VSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDA---IGGRRFSEGTSAD----- 267
Query: 328 RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q TL LLN LDG + S G ++I+ TN D LDPA+LRPGR+D
Sbjct: 268 REIQRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLD 313
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/168 (33%), Positives = 93/168 (55%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL 276
AE + + E +E + + ++RVG +G LL+GPPGTGK+ L A+++ L+ + +
Sbjct: 156 AEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKV 215
Query: 277 ELSAVHSN--SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPL 327
SA+ E R++ N + I+ +++ID + R+ ++ T+ +
Sbjct: 216 VSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDA---IGGRRFSEGTSAD----- 267
Query: 328 RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q TL LLN LDG + S G ++I+ TN D LDPA+LRPGR+D
Sbjct: 268 REIQRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLD 313
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 170 (64.9 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 62/193 (32%), Positives = 99/193 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + + RVG +G LLYGPPGTGK+ L A+++ ++ + + SA+
Sbjct: 153 ESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDK 212
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 213 YIGESARLIREMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 264
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCG-FDTLAAN 394
LLN LDG + + G ++I+ TN D LDPA+LRPGR+D I + D L +
Sbjct: 265 ELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIH 322
Query: 395 YLGITDHPLI-YE 406
GI H I YE
Sbjct: 323 AAGIAKHGEIDYE 335
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 169 (64.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 59/179 (32%), Positives = 93/179 (51%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T+D + ++ ++K+ I E +E VK + + +G A +G +LYGPPGTGK+ L A++
Sbjct: 141 STYDMVGGLDKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 267 N-----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
+ ++ +L + S + R L SI+ +++ID S +E
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 259
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG SS D +II+ TN D LDPA+LRPGR+D
Sbjct: 260 GDSEV---------QRTMLELLNQLDGFESS-KDIKIIM-ATNRLDILDPALLRPGRID 307
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 172 (65.6 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 72/237 (30%), Positives = 112/237 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TFD +A E KM ++++ +++ ++R+G +G LL GPPGTGK+ L A++
Sbjct: 173 TFDDVA-GMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAG- 230
Query: 269 LNFDIYDLELSA-------VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTV 321
D+ L +SA V + R L +T +S + ID EL D +
Sbjct: 231 -EADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFID---EL-DAVGRSRGA 285
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMS 381
+ + TL+ LL+ +DG S DE I++ TN D LDPA+LRPGR D H+ +
Sbjct: 286 GLGGGHDEREQTLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDRHVVID 343
Query: 382 YCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALK 436
P D ++ PL ++ ++ R TP G L L NE +A +
Sbjct: 344 --RPDWRDREKILHVHTRKIPLDKDV-DLAVIARGTPGMAGADLENLVNEAAILAAR 397
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/160 (33%), Positives = 88/160 (55%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + + RVG +G LLYGPPGTGK+ L A+++ L+ + + SA+
Sbjct: 155 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 214
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 215 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 266
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN +DG + S G ++I+ TN D LDPA+LRPGR+D
Sbjct: 267 ELLNQMDG-FDSLGQVKMIM-ATNRPDSLDPALLRPGRLD 304
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 171 (65.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 55/176 (31%), Positives = 93/176 (52%)
Query: 209 TFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
TFD + E++++++ E +E + +YY +G +G +LYG PGTGK+ L A++N
Sbjct: 181 TFDDIGGCESQIQELK-ESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVAN 239
Query: 268 -----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPT 319
++ DL + L R + SI+ +++ID + ++ +
Sbjct: 240 STSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDA---VGTKRFDTS 296
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + + +Q TL LLN LDG + S GD +II+ TN D LDPA++RPGR+D
Sbjct: 297 S----RGEQEVQRTLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGRID 346
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 33 LKLFVLMNIRGLFESFSSEITLIIDQFDGLASN 65
L V++ G+F++ S I ++D D + SN
Sbjct: 138 LNALVMVKAGGMFKTVPSAIVGVLD--DKIDSN 168
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/178 (30%), Positives = 94/178 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN--- 267
D +E+++++ I E +E + + Y +G +G +LYGPPGTGK+ L A++N
Sbjct: 194 DIGGLESQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 268 --YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+L +L + +L R + SI+ +++ID + ++ + T+
Sbjct: 253 ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA---VGTKRYEATSGG 309
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
R +Q T+ LLN LDG + S GD ++I+ TN D LDPA++RPGR+D I +
Sbjct: 310 E----REIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/178 (30%), Positives = 94/178 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN--- 267
D +E+++++ I E +E + + Y +G +G +LYGPPGTGK+ L A++N
Sbjct: 194 DIGGLESQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 268 --YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+L +L + +L R + SI+ +++ID + ++ + T+
Sbjct: 253 ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA---VGTKRYEATSGG 309
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
R +Q T+ LLN LDG + S GD ++I+ TN D LDPA++RPGR+D I +
Sbjct: 310 E----REIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 53/176 (30%), Positives = 93/176 (52%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS-- 266
TFD + E + + E +E +K + ++RVG +G LLYGPPGTGK+ L A++
Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238
Query: 267 ---NYLNFDIYDLELSAVHSNSELRRVLLSTGNRS---ILVVEDIDCSLELEDRQ-AQPT 319
N++ + + ++ + R + + I+ ++++D + R+ ++ T
Sbjct: 239 IGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDA---IGGRRFSEGT 295
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + R +Q TL LL +DG + + G +II+ TN D LDPA+LRPGR+D
Sbjct: 296 SAD-----REIQRTLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLD 344
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 53/160 (33%), Positives = 85/160 (53%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E +K + + RVG +G LLYGPPGTGK+ L A++ L + + SA+
Sbjct: 146 EVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDK 205
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ + ++ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 206 YIGESARIIREMFGYAKEHEPCVIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 257
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN +DG + G +II+ TN D LDPA+LRPGR+D
Sbjct: 258 ELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLD 295
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 58/172 (33%), Positives = 89/172 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYL--NF-DIYDL 276
K+ + E +E + + D YR++G RG LLYGPPGTGK+ L+ A++N NF +
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGS 202
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V ++ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 203 EFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 255
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI-YMSY 382
L LL +DG G ++ TN D LDPA+LRPGR+D I + SY
Sbjct: 256 RILIELLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 52/160 (32%), Positives = 89/160 (55%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAV--- 281
E +E + D + RVG + +G LLYGPPGTGK+ L A+++ ++ + + SA+
Sbjct: 156 EVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDK 215
Query: 282 --HSNSELRRVLLSTGNRS---ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
++ L R + + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 216 YIGESARLIREMFAYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 267
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN +DG + + G ++I+ TN D LDPA+LRPGR+D
Sbjct: 268 ELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLD 305
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + + RVG +G LLYGPPGTGK+ L A+++ ++ + + SA+
Sbjct: 153 ESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDK 212
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 213 YIGESARLIREMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 264
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + G ++I+ TN D LDPA+LRPGR+D
Sbjct: 265 ELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLD 302
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 235 DYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN--SELRRVLL 292
+ + RVG +G LLYGPPGTGK+ L A+++ L + + SA+ E RV+
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 293 STGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLSGLLNFLDGLW 345
+ ++ +++ID + R+ ++ T+ + R +Q TL LLN +DG +
Sbjct: 221 EMFGYARDHQPCVIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLMELLNQMDG-F 271
Query: 346 SSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCG-FDTLAANYLGITDH 401
+ +II+ TN D LDPA+LRPGR+D I + G D L + IT H
Sbjct: 272 DTLSKVKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH 327
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 163 (62.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 60/193 (31%), Positives = 97/193 (50%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAV--- 281
E +E + + + RVG +G LLYGPPGTGK+ L A+++ ++ + + SA+
Sbjct: 154 ESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDK 213
Query: 282 --HSNSELRRVLLSTGNRS---ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
++ L R + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 214 YIGESARLIREMFGYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 265
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAAN 394
LLN LDG + G ++I+ TN D LDPA+LRPGR+D I + + L +
Sbjct: 266 ELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIH 323
Query: 395 YLGITDHPLI-YE 406
GI H I YE
Sbjct: 324 AAGIAKHGEIDYE 336
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 162 (62.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 124 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 183
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 184 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 236
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 237 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 275
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 167 (63.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 216 EAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-- 271
+ ELK+ +IE ++ ++ D ++ +G + +G LLYGPPG K+ A++ LNF
Sbjct: 504 QEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLA 563
Query: 272 ----DIYDLELSAVHSNSELRRVLLST--GNRSILVVEDIDCSLELEDRQAQPTTVNVLK 325
+I++ + S +R + + SI+ ++ID DR +T
Sbjct: 564 VKGPEIFNKYVG--ESERAIREIFRKARAASPSIIFFDEIDAIAG--DRDGDSSTTAASN 619
Query: 326 PLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMS 381
L+ LLN +DG+ G +IV TN +DPA+LRPGR+D HIY++
Sbjct: 620 -------VLTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHIYVA 666
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 56/164 (34%), Positives = 85/164 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS 279
K+ I E +E + + D Y ++G RG LLYGPPGTGK+ L+ A++N + S
Sbjct: 181 KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGS 240
Query: 280 A-VHSN-SELRRVL-----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
VH E R++ L+ N SI+ ++++D S+ + AQ + R +Q
Sbjct: 241 EFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD-SIATKRFDAQTGSD------REVQ 293
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LL +DG S + ++ TN D LDPA+LRPGR+D
Sbjct: 294 RILIELLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLD 335
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/173 (30%), Positives = 90/173 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D ++ ++++ I E +E + +YY +G +G +LYGPPGTGK+ L A++N +
Sbjct: 185 DIGGLDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+ EL + +L R L SI+ +++ID + ++ +
Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---VGTKRYDSNSGG 300
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 301 E----REIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 162 (62.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 53/160 (33%), Positives = 86/160 (53%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAV--- 281
E +E +K + ++RVG +G LLYGPPGTGK+ L A+++ + + + SA+
Sbjct: 151 EVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDK 210
Query: 282 --HSNSELRRVLLSTGNRS---ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
++ L R + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 211 YIGESARLIREMFGYAKEHEPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 262
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + G +II+ TN D LDPA+LR GR+D
Sbjct: 263 ELLNQLDG-FDYLGKTKIIM-ATNRPDTLDPALLRAGRLD 300
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 141 (54.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 136 QSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYILRKSKSA---QEENKTLKLYSLNQDHAR 192
Q +Q+ + ++TF D+ + F IL +++ QEE KT+ +Y+ R
Sbjct: 2 QMIDLQTGTPWESVTFTALGTDRKV---FFNILEEARELALQQEEGKTV-MYTAVGSEWR 57
Query: 193 RFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYG 252
FG + P +++ ++ L I+ D++ F+ +Y G ++RGYLLYG
Sbjct: 58 PFG-----YPRRRRP--LNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYG 110
Query: 253 PPGTGKSSLIAAMSNYLNFDIYDLELS-AVHSNSELRRVL 291
PPG GKSS I A++ L I L L+ + S+ L +L
Sbjct: 111 PPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLL 150
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 162 (62.1 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 195 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 254
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 255 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 307
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 308 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 196 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 255
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 256 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 308
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 309 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVHSNS------ELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVT 333
+ EL RV G SI+ +++ID + ++ + R +Q T
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHGP-SIVFIDEIDA---IGTKRYDSNSGGE----REIQRT 308
Query: 334 LSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 309 MLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYGPPGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 74/230 (32%), Positives = 108/230 (46%)
Query: 207 PAT-FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL--- 261
PA FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L
Sbjct: 313 PAVKFDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKA 370
Query: 262 IAAMSNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQA 316
+AA SN F+I L++ V +L R L + SI+ ++++D SL E R+
Sbjct: 371 VAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREG 429
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMD 375
+ LK L+ F DG+ SS G++RI+V TN LD AVLR R
Sbjct: 430 EHDASRRLKT--------EFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFT 477
Query: 376 VHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+Y+S L N L PL KE+ Q R+T G L
Sbjct: 478 KRVYVSLPNEETRLILLKNLLSKQGSPLTQ--KELAQLARMTDGYSGSDL 525
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 164 (62.8 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 74/230 (32%), Positives = 108/230 (46%)
Query: 207 PAT-FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL--- 261
PA FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L
Sbjct: 321 PAVKFDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKA 378
Query: 262 IAAMSNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQA 316
+AA SN F+I L++ V +L R L + SI+ ++++D SL E R+
Sbjct: 379 VAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREG 437
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMD 375
+ LK L+ F DG+ SS G++RI+V TN LD AVLR R
Sbjct: 438 EHDASRRLKT--------EFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFT 485
Query: 376 VHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+Y+S L N L PL KE+ Q R+T G L
Sbjct: 486 KRVYVSLPNEETRLILLKNLLSKQGSPLTQ--KELAQLARMTDGYSGSDL 533
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 164 (62.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 74/230 (32%), Positives = 108/230 (46%)
Query: 207 PAT-FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL--- 261
PA FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L
Sbjct: 334 PAVKFDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKA 391
Query: 262 IAAMSNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQA 316
+AA SN F+I L++ V +L R L + SI+ ++++D SL E R+
Sbjct: 392 VAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREG 450
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMD 375
+ LK L+ F DG+ SS G++RI+V TN LD AVLR R
Sbjct: 451 EHDASRRLKT--------EFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFT 498
Query: 376 VHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+Y+S L N L PL KE+ Q R+T G L
Sbjct: 499 KRVYVSLPNEETRLILLKNLLSKQGSPLTQ--KELAQLARMTDGYSGSDL 546
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 161 (61.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 57/178 (32%), Positives = 88/178 (49%)
Query: 208 ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
+T+D + + K I E +E VK + + +G A +G +LYGPPGTGK+ L A+++
Sbjct: 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 204
Query: 268 YLN---FDIYDLEL--SAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQAQ 317
+ + + EL + S + R L SI+ +++ID S +E
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGG 264
Query: 318 PTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG +S + I+ TN D LDPA+LRPGR+D
Sbjct: 265 DSEV---------QRTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRID 311
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 71/246 (28%), Positives = 113/246 (45%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF+ + E K+ + E +E F+K + + +G +G LL GPPGTGK+ L A++
Sbjct: 298 TFEDVKGCDEAKQELKEVVE-FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 269 LNFDIYDL---ELSAVHSNSELRRV--LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
+ E V RRV L V ID E++ A+ T +V
Sbjct: 357 AKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFID---EIDSVGAKRTN-SV 412
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
L P T++ LL+ +DG + G I++ TN +D LD A+LRPGR DV + +S
Sbjct: 413 LHPYANQ--TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVSTP 468
Query: 384 TPCGFDTLAANYLGITDHPLIYEIKEIMQNVR-VTPADVGEQLLKNEDPEIALKGLLEFL 442
G + + YL H I ++ + + T AD+ E ++ A+ G E +
Sbjct: 469 DFTGRKEILSLYLTKILHDEI-DLDMLARGTSGFTGADL-ENMINQAALRAAIDGA-ETV 525
Query: 443 NAKLIE 448
+ K +E
Sbjct: 526 SMKHLE 531
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 160 (61.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 139 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 198
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 199 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 250
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 251 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 307
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 308 HAGPITKHGEIDYE 321
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 315
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 316 HAGPITKHGEIDYE 329
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 61/195 (31%), Positives = 100/195 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 258
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMD--VHIYMSYCTPCGFDTLA 392
LLN +DG + R+ ++ TN D LDPA+LRPGR+D +HI + D L
Sbjct: 259 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPN-EQARLDILK 314
Query: 393 ANYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 315 IHSGPITKHGDIDYE 329
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 165 (63.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 54/179 (30%), Positives = 90/179 (50%)
Query: 210 FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYL 269
F +A AE K+ ++E + +F++ + Y ++G RG +L GPPGTGK+ L A +
Sbjct: 372 FKDVAGMAEAKQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 270 NFDIYDLELSA-----VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTV 321
Y + S V + R L T SI+ V++ID ++ + + T
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEID-AIGKQRSKGNATGA 489
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
N + + TL+ LL +DG +S D +++ TN D LD A++RPGR D H+++
Sbjct: 490 NDER-----ETTLNQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDRHVHI 541
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 160 (61.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 153 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 212
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 213 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 264
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 265 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 321
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 322 HAGPITKHGEIDYE 335
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 164 (62.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TFD + E K + +E++ ++K + Y R+G +G LL GPPGTGK+ L A++
Sbjct: 246 TFDDVRGMDEAK-LEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAG- 303
Query: 269 LNFDIYDLELSAVHS-NSELRRVLLSTGNRSILVVED-----IDCSLELEDRQAQPTTVN 322
+ ++ H+ SE VL+ G R + + D C + +++ + +
Sbjct: 304 ------EAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSK-R 356
Query: 323 VLKPLRPM-QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
V + P T++ LL+ +DG + G I++ TN D LD A+LRPGR DV +
Sbjct: 357 VSNSIHPYANQTINQLLSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFDVRV 411
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 160 (61.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 272
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 273 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 330 HAGPITKHGEIDYE 343
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 160 (61.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 272
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 273 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 330 HAGPITKHGEIDYE 343
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 160 (61.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 225 EDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN 284
E +E + + ++RVG +G LLYGPPGTGK+ L A+++ L+ + + S++
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220
Query: 285 --SELRRVLLSTGNRS------ILVVEDIDCSLELEDRQ-AQPTTVNVLKPLRPMQVTLS 335
E R++ N + I+ +++ID + R+ ++ T+ + R +Q TL
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSAD-----REIQRTLM 272
Query: 336 GLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTP-CGFDTLAA 393
LLN +DG + R+ ++ TN D LDPA+LRPGR+D I++ D L
Sbjct: 273 ELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKI 329
Query: 394 NYLGITDHPLI-YE 406
+ IT H I YE
Sbjct: 330 HAGPITKHGEIDYE 343
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/164 (32%), Positives = 84/164 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL--- 276
K+ I E +E + + D Y ++G RG LLYGPPGTGK+ L+ A++N +
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + +I+ +++ID ++ + AQ T + R +Q
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 276
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + ++I+ TN D LDPA+LRPGR+D
Sbjct: 277 RILLELLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/164 (32%), Positives = 84/164 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL--- 276
K+ I E +E + + D Y ++G RG LLYGPPGTGK+ L+ A++N +
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + +I+ +++ID ++ + AQ T + R +Q
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 276
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + ++I+ TN D LDPA+LRPGR+D
Sbjct: 277 RILLELLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/164 (32%), Positives = 85/164 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL--- 276
K+ I E +E + D Y+++G RG LLYGPPGTGK+ L+ A++N +
Sbjct: 175 KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGS 234
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V + + +I+ +++ID ++ + AQ T + R +Q
Sbjct: 235 EFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 287
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++I+ TN D LDPA+LRPGR+D
Sbjct: 288 RILLELLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLD 329
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 70/250 (28%), Positives = 116/250 (46%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TFD +A E K+ +IE ++ F+K + + ++G +G LL G PGTGK+ L A++
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 269 LNFDIYDLELSA-----VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
N + + S V + R + G + + +D E+ D + + +
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVD---EI-DAVGRHRGIGL 270
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
+ TL+ LL +DG S+ G +I+ TN D LDPA+LRPGR D + +S
Sbjct: 271 GGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 384 TPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALKGLLEF 441
G + + A + PL ++ ++ R TP G L L NE IA +
Sbjct: 329 DINGREKIIAVHAKKV--PLAPDV-DLRVIARGTPGFSGADLANLVNEAALIAAR----- 380
Query: 442 LNAKLIEGCE 451
L+ K++ C+
Sbjct: 381 LDKKIVTMCD 390
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 70/250 (28%), Positives = 116/250 (46%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TFD +A E K+ +IE ++ F+K + + ++G +G LL G PGTGK+ L A++
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 269 LNFDIYDLELSA-----VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
N + + S V + R + G + + +D E+ D + + +
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVD---EI-DAVGRHRGIGL 270
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
+ TL+ LL +DG S+ G +I+ TN D LDPA+LRPGR D + +S
Sbjct: 271 GGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 384 TPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALKGLLEF 441
G + + A + PL ++ ++ R TP G L L NE IA +
Sbjct: 329 DINGREKIIAVHAKKV--PLAPDV-DLRVIARGTPGFSGADLANLVNEAALIAAR----- 380
Query: 442 LNAKLIEGCE 451
L+ K++ C+
Sbjct: 381 LDKKIVTMCD 390
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYD 275
L+K I E +E V K+ + ++G +G LLYGPPGTGK+ + A + N
Sbjct: 176 LEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 235
Query: 276 LELSAVHSNSELRRVLLSTGNRSI-----LVVEDIDCSLELEDRQAQPTTV--NVLKPLR 328
L + +L ++ + G + + L E C + +++ A T + + R
Sbjct: 236 L------AGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
+Q T+ LLN LDG +SS DERI ++ TN D LDPA++R GR+D I + T
Sbjct: 290 EVQRTMLELLNQLDG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/224 (28%), Positives = 107/224 (47%)
Query: 168 LRKSKSAQEENKTLKLY---SLNQDHARRFGLDSWHWITFNHPATFDTLA-MEAELKKMI 223
L KS SA +N T Y S + + R+ +S + T+D + + ++LK I
Sbjct: 308 LLKSTSAGAKNNTDTFYFISSTTRINLRKICTNSKEQDS-QFKVTYDMIGGLNSQLKA-I 365
Query: 224 IEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLE----LS 279
E +E +K+ + ++ G RG LLYGPPGTGK+ + A++N + + + +S
Sbjct: 366 REIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIIS 425
Query: 280 AVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLS 335
+ +E LR++ R SI+ ++++D R+ + V +V S
Sbjct: 426 KFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KREGAQSEVE-------KRVVAS 476
Query: 336 GLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
LL +DG+ S + R++V TN LD A+ RPGR D I
Sbjct: 477 -LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEI 519
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/179 (29%), Positives = 87/179 (48%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
T+D + + K I E +E +KR + ++ G + RG LLYGPPGTGK+ + A++N
Sbjct: 316 TYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANE 375
Query: 269 LNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTT 320
+ + + +S + SE LR++ R SI+ ++++D R+
Sbjct: 376 VGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCP--KREGAQNE 433
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
V +V S LL +DG+ S + +++V TN LD A+ RPGR D I
Sbjct: 434 VE-------KRVVAS-LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEI 484
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 61/227 (26%), Positives = 109/227 (48%)
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P F+ +A E K ++E ++ F+K ++ Y +G +G LL GPPG+GK+ L A++
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 267 NYLNFD-IYD-----LELSAVHSNSELRRVLLSTGN--RSILVVEDIDCSLELEDRQAQP 318
N IY +E+ +R++ + SI+ +++ID + +++
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+ VN R TL+ LL +DG ++ +++ TN D LD A+LRPGR D +
Sbjct: 261 S-VNGAGQ-REHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 379 YMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
Y+ G + Y+ L ++++I + R+TP G L
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTPGFSGADL 361
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 61/227 (26%), Positives = 109/227 (48%)
Query: 207 PATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
P F+ +A E K ++E ++ F+K ++ Y +G +G LL GPPG+GK+ L A++
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 267 NYLNFD-IYD-----LELSAVHSNSELRRVLLSTGN--RSILVVEDIDCSLELEDRQAQP 318
N IY +E+ +R++ + SI+ +++ID + +++
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+ VN R TL+ LL +DG ++ +++ TN D LD A+LRPGR D +
Sbjct: 261 S-VNGAGQ-REHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 379 YMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
Y+ G + Y+ L ++++I + R+TP G L
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTPGFSGADL 361
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/173 (31%), Positives = 87/173 (50%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +E ++++ I E +E +K + + +VG +G LLYGPPGTGK+ L A++ N
Sbjct: 171 DIGGLEKQMQE-IREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETN 229
Query: 271 ---FDIYDLEL--SAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+ EL + + L + + SI+ +++ID + ++ T
Sbjct: 230 ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDA---IAAKRTDALTGG 286
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q TL LL +DG + + GD +II TN D LDPA+LRPGR D
Sbjct: 287 D----REVQRTLMQLLAEMDG-FDARGDVKIIG-ATNRPDILDPAILRPGRFD 333
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/179 (30%), Positives = 92/179 (51%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T+D + ++ ++K+ I E +E +K + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 129 STYDMIGGLDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 267 NYLN---FDIYDLEL--SAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + + EL + S + R L SI+ +++ID S ++ +
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGS 247
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG + + I+ TN D LDPA+LRPGR+D
Sbjct: 248 GDSEV---------QRTMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGRID 295
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 155 (59.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 54/179 (30%), Positives = 91/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 145 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 267 N-----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
+ ++ +L + S + R L SI+ +++ID S +E
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LDPA+LRPGR+D
Sbjct: 264 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 311
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 66 QIYRAADIYLGNKISPSTKMFRVSMPEKENKMSISMAKNQEIVD 109
Q+ + Y+G + P K + E K + + KN +I D
Sbjct: 63 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDIND 106
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 54/175 (30%), Positives = 88/175 (50%)
Query: 208 ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
A++D + ++ +K+ +I+D F K + Y ++ WKRG + YGPPG GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 268 YLNFDIYD----LELSAVHS--NSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTV 321
L + + D L + ++ S E ++ +G R++ C L ED + V
Sbjct: 250 ML-YKLKDPVPTLYVRSLVSWMGPEAALSMIFSGARAMA-----PCYLVFEDLDS---IV 300
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVL-RPGRMD 375
N +R S LN +DGL ++ D ++ +TNH +RLDP + RP R D
Sbjct: 301 N--DSVR------SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSRFD 345
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 79/264 (29%), Positives = 119/264 (45%)
Query: 173 SAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT-FDTLAMEAELKKMIIEDLERFV 231
+A + K LK + + F ++ I N A FD +A + EL K ++++
Sbjct: 220 TAPRKKKDLKNFRNVDSNLANFIMNE---IVDNGTAVKFDDIAGQ-ELAKQALQEIVILP 275
Query: 232 K-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMSNYLNFDIYDLELSA--VHSNS 285
R + + + +A RG LL+GPPG GK+ L +AA SN F+I L++ V
Sbjct: 276 SLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE 334
Query: 286 ELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLD 342
+L R L + SI+ ++++D SL E R+ + LK L+ F D
Sbjct: 335 KLVRALFAVARELQPSIIFIDEVD-SLLRERREGEHDASRRLKT--------EFLIEF-D 384
Query: 343 GLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDH 401
G+ S GD+R++V TN LD AVLR R +Y+S L N L
Sbjct: 385 GV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGS 441
Query: 402 PLIYEIKEIMQNVRVTPADVGEQL 425
PL KE+ Q R+T G L
Sbjct: 442 PLTQ--KELAQLARLTDGYSGSDL 463
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 53/176 (30%), Positives = 92/176 (52%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
+F+ + E + + E +E +K + + RVG +G LLYGPPGTGK+ L A++
Sbjct: 170 SFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 229
Query: 269 LNFDIYDLELSAV-----HSNSELRRVLLSTGNRS---ILVVEDIDCSLELEDRQ-AQPT 319
+ + SA+ ++ L R + + I+ ++++D + R+ ++ T
Sbjct: 230 IGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDA---IGGRRFSEGT 286
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + R +Q TL LLN +DG + + G +II+ TN D LDPA+LR GR+D
Sbjct: 287 SAD-----REIQRTLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLD 335
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/173 (30%), Positives = 90/173 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +++++++ I E +E + +YY +G +G +LYG PGTGK+ L A++N +
Sbjct: 186 DIGGLDSQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+ EL + +L R L SI+ +++ID + ++ +
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGG 301
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 302 E----REIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 58/172 (33%), Positives = 88/172 (51%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +EA++++ I E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 189 DIGGLEAQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS 247
Query: 271 FDIYDLELSAVHSNSELRRVLLSTGNRSIL----VVEDIDCSLELEDR-QAQPTTVNVLK 325
L V SEL + L G + + V +D+ S+ D A T
Sbjct: 248 ATF----LRVV--GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAN 301
Query: 326 P--LRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + S GD ++I+ TN + LDPA+LRPGR+D
Sbjct: 302 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 339 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 396
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 397 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 455
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 456 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFTKRVY 503
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 504 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTNGYSGSDL 547
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 306 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 363
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 364 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 422
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 423 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 470
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 471 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 514
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 306 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 363
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 364 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 422
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 423 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 470
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 471 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 514
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 57/172 (33%), Positives = 87/172 (50%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +EA++++ I E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 189 DIGGLEAQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS 247
Query: 271 FDIYDLELSAVHSNSELRRVLLSTGNRSIL----VVEDIDCSLELEDRQAQPTTVNVLKP 326
L V SEL + L G + + V +D+ S+ D T
Sbjct: 248 ATF----LRVV--GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAH 301
Query: 327 L---RPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + S GD ++I+ TN + LDPA+LRPGR+D
Sbjct: 302 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 79/264 (29%), Positives = 119/264 (45%)
Query: 173 SAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPAT-FDTLAMEAELKKMIIEDLERFV 231
+A + K LK + + F ++ I N A FD +A + EL K ++++
Sbjct: 303 TAPRKKKDLKNFRNVDSNLANFIMNE---IVDNGTAVKFDDIAGQ-ELAKQALQEIVILP 358
Query: 232 K-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMSNYLNFDIYDLELSA--VHSNS 285
R + + + +A RG LL+GPPG GK+ L +AA SN F+I L++ V
Sbjct: 359 SLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE 417
Query: 286 ELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLD 342
+L R L + SI+ ++++D SL E R+ + LK L+ F D
Sbjct: 418 KLVRALFAVARELQPSIIFIDEVD-SLLRERREGEHDASRRLKT--------EFLIEF-D 467
Query: 343 GLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDH 401
G+ S GD+R++V TN LD AVLR R +Y+S L N L
Sbjct: 468 GV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGS 524
Query: 402 PLIYEIKEIMQNVRVTPADVGEQL 425
PL KE+ Q R+T G L
Sbjct: 525 PLTQ--KELAQLARLTDGYSGSDL 546
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 338 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 395
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 396 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 454
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 455 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 502
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 503 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 546
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 339 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 396
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 397 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 455
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 456 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 503
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 504 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 547
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 349 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 406
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 407 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 465
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 466 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 513
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 514 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 557
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 52/163 (31%), Positives = 80/163 (49%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS 279
K+ I E +E + + Y+++G RG LLYGPPGTGK+ L A++N+ +
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAF----IR 219
Query: 280 AVHSNSELRRVLLSTGNRSI-----LVVEDIDCSLELEDRQAQPTT-VNVLKPL-RPMQV 332
V SE + L G R + L E+ + +++ A T + R +Q
Sbjct: 220 VV--GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQR 277
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 278 ILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLD 318
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/179 (29%), Positives = 91/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T+D + ++ ++K+ I E +E +K + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + S + R L SI+ +++ID S +E
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ +Q T+ LLN LDG +S ++ ++ TN D LD A+LRPGR+D
Sbjct: 277 NGDS--------EVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/179 (29%), Positives = 91/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T+D + ++ ++K+ I E +E +K + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + S + R L SI+ +++ID S +E
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ +Q T+ LLN LDG +S ++ ++ TN D LD A+LRPGR+D
Sbjct: 277 NGDS--------EVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 56/177 (31%), Positives = 89/177 (50%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYD 275
L+K I E +E V K+ + ++G +G LLYGPPGTGK+ + A + N
Sbjct: 175 LEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 234
Query: 276 LELSAVHSNSELRRVLLSTGNRSI-----LVVEDIDCSLELEDRQAQPTTV--NVLKPLR 328
L + +L ++ + G + + L E C + +++ A T + + R
Sbjct: 235 L------AGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
+Q T+ LLN LDG +SS D+RI ++ TN D LDPA++R GR+D I + T
Sbjct: 289 EVQRTMLELLNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 72/226 (31%), Positives = 106/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERF-VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + +L K ++++ R + + + +A RG LL+GPPG GK+ L +A
Sbjct: 294 FDDIAGQ-DLAKQALQEIVILPALRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAME 351
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ +++ID SL E R+ +
Sbjct: 352 SNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEID-SLLCERREGEHDA 410
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GDER++V TN LD AVLR R IY
Sbjct: 411 SRRLKT--------EFLIEF-DGVQSG-GDERVLVMGATNRPQELDEAVLR--RFAKRIY 458
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
++ T L N L +PL KE+ Q R+T G L
Sbjct: 459 VALPTEETRLKLLKNLLSKHRNPLSQ--KELSQLARLTDGYSGSDL 502
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 161 (61.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 73/255 (28%), Positives = 107/255 (41%)
Query: 140 MQSEIRYFNLTFHKQH-KDKVLNSYFPYILRKSKSAQEENKTLKLYSLNQDHARRF-GLD 197
M I YF LT K + N Y R + NK L + N + + D
Sbjct: 780 MLKRINYF-LTMEKTLLRMTTRNETLEYQCR----VEHNNKVLDVSFTNLSYRQVIQSKD 834
Query: 198 SWHWITFNH--P--ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGP 253
FNH P + D + +E K+ +IE + ++K + G G+L GP
Sbjct: 835 LQETSLFNHSLPDNSLDDVIGLE-RAKRRLIEVVS-WLKAPEKLLNFGIKIPTGFLFSGP 892
Query: 254 PGTGKSSLIAAMSNYLNFDIYDL---ELSAVHSNSELRRV--LLSTGNR---SILVVEDI 305
PGTGK+ L A++ + + ELS HS + L +T + SI+ +++I
Sbjct: 893 PGTGKTLLAKAVAGECELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEI 952
Query: 306 DCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFT-TNHKDRL 364
D AQ T N R +T++ LL +DG S + + V TNH L
Sbjct: 953 DAIA------AQRTD-NSDGSSRDKNLTVNALLTEMDGF--SIAEVPVFVMAATNHPQLL 1003
Query: 365 DPAVLRPGRMDVHIY 379
D A+ RPGR D IY
Sbjct: 1004 DSAITRPGRFDETIY 1018
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 51/164 (31%), Positives = 85/164 (51%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG LLYGPPGTGK+ L A++++ + +
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGS 218
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + +I+ +++ID ++ + AQ T + R +Q
Sbjct: 219 EFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 271
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG S + ++ TN +D LDPA+LRPGR+D
Sbjct: 272 RILMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLD 313
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 53/177 (29%), Positives = 92/177 (51%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T+D + ++ ++K+ I E +E +K + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 142 STYDMVGGLDKQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQP 318
++ + +L + S + R L SI+ +++ID S+ ++
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID-SIGSSRGESGS 259
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ +Q T+ LLN LDG S+ + ++ TN D LDPA+LRPGR+D
Sbjct: 260 GGGD-----SEVQRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRID 309
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 56/171 (32%), Positives = 88/171 (51%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMSN--YLN 270
L K I E E V ++ D +R++G +G L++GPPGTGK+ L AA SN +L
Sbjct: 190 LSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLK 249
Query: 271 FDIYDLELSAVHSNSELRR---VLLSTGNRSILVVEDIDC--SLELEDRQAQPTTVNVLK 325
L + ++L R L + +I+ ++++D + + +A
Sbjct: 250 LAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGD------- 302
Query: 326 PLRPMQVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG +SS D+R+ ++ TN D LDPA+LR GR+D
Sbjct: 303 --REVQRTMLELLNQLDG-FSS--DDRVKVIAATNRVDTLDPALLRSGRLD 348
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 51/161 (31%), Positives = 82/161 (50%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E + +YY +G +G +LYG PGTGK+ L A++N + + EL
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI 256
Query: 280 AVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
+ +L R L SI+ +++ID + ++ + R +Q T+
Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA---IGTKRYDSNSGGE----REIQRTM 309
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
LLN LDG + S GD ++I+ TN + LDPA++RPGR+D
Sbjct: 310 LELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 51/164 (31%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN--YLNF-DIYDL 276
K+ + E +E + + Y ++G G L+YGPPGTGK+ L+ A++N + F +
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGS 206
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + SI+ ++++D ++ + AQ T + R +Q
Sbjct: 207 EFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-AIATKRFDAQ-TGAD-----REVQ 259
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG S + ++ TN D LDPA+LRPGR+D
Sbjct: 260 RILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLD 301
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 51/164 (31%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN--YLNF-DIYDL 276
K+ + E +E + + Y ++G G L+YGPPGTGK+ L+ A++N + F +
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGS 206
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + SI+ ++++D ++ + AQ T + R +Q
Sbjct: 207 EFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-AIATKRFDAQ-TGAD-----REVQ 259
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG S + ++ TN D LDPA+LRPGR+D
Sbjct: 260 RILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLD 301
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 66/243 (27%), Positives = 109/243 (44%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
T+D + + K I E +E +K+ + ++ G RG LLYGPPGTGK+ + A++N
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 269 LNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTT 320
+ + + +S + +E LR++ R SI+ ++++D R+
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCP--KREGAQNE 468
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
V +V S LL +DG+ S + +++V TN LD A+ RPGR D I
Sbjct: 469 VE-------KRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIE 520
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALKG 437
+ P D L + P + E++Q VG L L NE AL+
Sbjct: 521 IG--VPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRR 578
Query: 438 LLE 440
+L+
Sbjct: 579 ILK 581
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 68/238 (28%), Positives = 111/238 (46%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYD 275
+K + + +E +K + + R+G +G LLYGPPG K+ + A++N LNF I
Sbjct: 635 IKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKG 694
Query: 276 LELSAVHSNSELRRVLLSTGNR------SILVVEDIDCSLELEDRQAQPTTVNVLKPLRP 329
EL + E R + T + SI+ +++D +L +E R + NV +
Sbjct: 695 PELMNKYVG-ESERAVRETFRKARAVAPSIIFFDELD-ALAVE-RGSSLGAGNVADRV-- 749
Query: 330 MQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFD 389
L+ LL +DG+ D I+ TN DR+D A++RPGR+D IY+ P
Sbjct: 750 ----LAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRIDRIIYVPL--PDAAT 801
Query: 390 TLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKNEDPEIALKGLLEFLNAKLI 447
L P+ E+ ++ + + T A G +++ E AL L E + A LI
Sbjct: 802 RREIFKLQFHSMPVSNEV-DLDELILQTDAYSGAEIVA-VCREAALLALEEDIQANLI 857
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 53/177 (29%), Positives = 94/177 (53%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + +E ++K+ I E +E VK + + +G +G LLYGPPGTGK+ L A++
Sbjct: 142 STYEMVGGLEKQIKE-IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 267 NYLNFDIYDLELSAVHSNSELRRVLLSTGNRSI----LVVEDIDCSL----ELEDRQAQP 318
++ D + V S SEL + + G+R + ++ + S+ E++ +
Sbjct: 201 HHT-----DCKFIRV-SGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 254
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + +Q T+ LLN LDG ++ + ++ TN D LDPA+LRPGR+D
Sbjct: 255 SDSSGGSGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 309
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 67/243 (27%), Positives = 113/243 (46%)
Query: 209 TFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
T+D + + ++LK+ I E +E +K+ + ++ G + RG LLYGPPGTGK+ + A++N
Sbjct: 345 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 268 YLNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPT 319
+ + + +S + +E LR++ R SI+ ++++D R+
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KREGAQN 461
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
V +V S LL +DG+ S + +++V TN LD A+ RPGR D I
Sbjct: 462 EVE-------KRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 513
Query: 379 YMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALK 436
+ P D L + P + E++Q VG L L NE AL+
Sbjct: 514 EIG--VPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALR 571
Query: 437 GLL 439
+L
Sbjct: 572 RVL 574
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 54/170 (31%), Positives = 83/170 (48%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS-NY-LNF-DIYD 275
+K I++ ++ +K + + G + G L YGPPGTGK+ L A++ N+ LNF +
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKG 881
Query: 276 LELSAVH---SNSELRRVLLSTGNRSILVV--EDIDCSLELEDRQAQPTTVNVLKPLRPM 330
EL ++ S + +RRV + V+ +++D Q V M
Sbjct: 882 PELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGV--------M 933
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
+S LL LDG+ S GD +V TN D LD A+LRPGR D +Y+
Sbjct: 934 DRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 54/170 (31%), Positives = 83/170 (48%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS-NY-LNF-DIYD 275
+K I++ ++ +K + + G + G L YGPPGTGK+ L A++ N+ LNF +
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKG 881
Query: 276 LELSAVH---SNSELRRVLLSTGNRSILVV--EDIDCSLELEDRQAQPTTVNVLKPLRPM 330
EL ++ S + +RRV + V+ +++D Q V M
Sbjct: 882 PELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGV--------M 933
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
+S LL LDG+ S GD +V TN D LD A+LRPGR D +Y+
Sbjct: 934 DRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 156 (60.0 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 205 NHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 264
N TFD +A E K+ +E +E F+K+ + + VG +G LL GPPGTGK+ L A
Sbjct: 214 NTGVTFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 272
Query: 265 MSNYLNFDIYDLELSAVHSNSELRRVLLSTGN---RSIL--VVEDIDCSLELEDRQA--Q 317
++ + + S SE + + G R + E+ C + +++ A +
Sbjct: 273 IAGEAGVPFFSI------SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 326
Query: 318 PTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + TL+ LL +DG + G I+V TN D LD A+LRPGR D
Sbjct: 327 QRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFD 382
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 70/226 (30%), Positives = 105/226 (46%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + +L K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 341 FDDIAGQ-DLAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 398
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 399 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERREGEHDA 457
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
LK L+ F DG+ S GD+R++V TN LD AVLR R +Y
Sbjct: 458 SRRLKT--------EFLIEF-DGV-QSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 505
Query: 380 MSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL 425
+S L N L PL KE+ Q R+T G L
Sbjct: 506 VSLPNEETRLLLLKNLLCKQGSPLTQ--KELAQLARMTDGYSGSDL 549
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 157 (60.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 69/244 (28%), Positives = 111/244 (45%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
T+D + + K I E +E +K+ + ++ G RG LLYGPPGTGK+ + A++N
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 410
Query: 269 LNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTT 320
+ + + +S + +E LR++ R SI+ ++++D R+
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KREGAQNE 468
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHIY 379
V +V S LL +DG+ S + +++V TN LD A+ RPGR D I
Sbjct: 469 VE-------KRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIE 520
Query: 380 MSYCTPCGFDTL--AANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIAL 435
+ P D L L H L+ E+ E++Q VG L L NE AL
Sbjct: 521 IG--VPNAADRLDILQKLLQRVPH-LLTEV-ELLQLANSAHGYVGADLKALCNEAGLYAL 576
Query: 436 KGLL 439
+ +L
Sbjct: 577 RRVL 580
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/170 (30%), Positives = 86/170 (50%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYD 275
+K + + +E +K + + R+G +G LLYGPPG K+ + A++N LNF I
Sbjct: 635 IKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKG 694
Query: 276 LELSAVH---SNSELRRVLLSTG--NRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPM 330
EL + S +R + + SI+ +++D +L +E R + NV +
Sbjct: 695 PELMNKYVGESERAVREIFRKARAVSPSIIFFDELD-ALAIE-RGSSSGAGNVADRV--- 749
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
L+ LL +DG+ D I+ TN DR+D A++RPGR+D IY+
Sbjct: 750 ---LAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRIDRIIYV 794
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 156 (60.0 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 166 YILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
Y+ R++ SA + + + + ARRF ++ I F+ A D EA+++ I+E
Sbjct: 365 YLSRRAGSASAGRNGI--FGIGKSRARRFNHETDVKIKFSDVAGMD----EAKVE--IME 416
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL------ELS 279
+ F+K + ++++G RG +L GPPGTGK+ L A + + + E+
Sbjct: 417 FVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMF 475
Query: 280 AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGL 337
S +R + + + I+ +++ID + R A+ N + TL+ +
Sbjct: 476 VGVGPSRVRDLFANARKNTPCIIFIDEIDAIGK--SRSAK----NFSGGNDERESTLNQI 529
Query: 338 LNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
L +DG +S D+ +++ TN D LD A++RPGR D HI
Sbjct: 530 LTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFDRHI 568
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 156 (60.0 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 53/180 (29%), Positives = 90/180 (50%)
Query: 209 TFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
T+D + + ++LK I E +E +K+ + ++ G RG LLYGPPGTGK+ + A++N
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 268 YLNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPT 319
+ + + +S + +E LR++ R SI+ ++++D R+ +
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KREGAQS 467
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
V +V S LL +DG+ S + R++V TN LD A+ RPGR D I
Sbjct: 468 EVE-------KRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEI 519
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYD 275
+K + + +E +K + R+G +G LLYGPPG K+ + A++N LNF I
Sbjct: 635 IKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKG 694
Query: 276 LELSAVH---SNSELRRVLLSTGN--RSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPM 330
EL + S +R + SI+ +++D +L +E R + NV +
Sbjct: 695 PELMNKYVGESERAVREIFRKARAVAPSIIFFDELD-ALAVE-RGSSSGAGNVADRV--- 749
Query: 331 QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
L+ LL +DG+ + ++ TN DR+D A++RPGR+D IY+
Sbjct: 750 ---LAQLLTEMDGI-EQLKNVTVLA-ATNRPDRIDKALMRPGRIDRIIYV 794
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/206 (28%), Positives = 94/206 (45%)
Query: 188 QDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRG 247
Q A+R G + +T+ + + ME L I++ +K+ + Y +VG A G
Sbjct: 505 QPSAKREGFATIPDVTWQNVGALFKIRME--LHMCIVQP----IKKPELYLKVGIAAPAG 558
Query: 248 YLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRRVL--LSTGNRSI 299
L++GPPG GK+ L A++N NF I EL + S +R+V I
Sbjct: 559 VLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCI 618
Query: 300 LVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTN 359
+ +++D + D ++ V+ L L LDGL G ++ TN
Sbjct: 619 IFFDELDALVPRRDTSMSESSSRVVNTL----------LTELDGLNDRKGV--FVIGATN 666
Query: 360 HKDRLDPAVLRPGRMDVHIYMSYCTP 385
D +DPA+LRPGR+D +Y+ TP
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTP 692
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/206 (28%), Positives = 94/206 (45%)
Query: 188 QDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRG 247
Q A+R G + +T+ + + ME L I++ +K+ + Y +VG A G
Sbjct: 505 QPSAKREGFATIPDVTWQNVGALFKIRME--LHMCIVQP----IKKPELYLKVGIAAPAG 558
Query: 248 YLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRRVL--LSTGNRSI 299
L++GPPG GK+ L A++N NF I EL + S +R+V I
Sbjct: 559 VLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCI 618
Query: 300 LVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTN 359
+ +++D + D ++ V+ L L LDGL G ++ TN
Sbjct: 619 IFFDELDALVPRRDTSMSESSSRVVNTL----------LTELDGLNDRKGV--FVIGATN 666
Query: 360 HKDRLDPAVLRPGRMDVHIYMSYCTP 385
D +DPA+LRPGR+D +Y+ TP
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTP 692
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/177 (28%), Positives = 87/177 (49%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
T+D + E+K+ + E +E V D Y + G + +G L YGPPGTGK+ L A++
Sbjct: 485 TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATE 544
Query: 269 LNFDIYDLE----LSAVHSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
++ + ++ LS + SE R + + V +D EL D A+ ++
Sbjct: 545 VSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLD---EL-DSIAKARGGSL 600
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ LL +DG+ + ++ TN D++DPA+LRPGR+D IY+
Sbjct: 601 GDAGGASDRVVNQLLTEMDGM--NAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYV 655
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E ++ ++ +G RG L+YGPPGTGK+ + A++N F I E+
Sbjct: 226 IREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVM 285
Query: 280 ---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
A S S LR+ + I+ +++ID D+ T V + + +
Sbjct: 286 SKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK----TNGEVERRV------V 335
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
S LL +DG+ +++ TN + +DPA+ R GR D
Sbjct: 336 SQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFD 374
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF +A E K+ I+E + F+K Y+++G +G +L GPPGTGK+ L A +
Sbjct: 352 TFKDVAGMDEAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGE 410
Query: 269 LNFDIYDL------ELSAVHSNSELRRVLLST-GNRSILV-VEDIDCSLELEDRQAQPTT 320
+ Y + E+ S +R + N +V +++ID R
Sbjct: 411 AGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSRGGFHND 470
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFT-TNHKDRLDPAVLRPGRMDVHIY 379
+ TL+ LL +DG S+ G ++VF TN D LDPA+LRPGR D IY
Sbjct: 471 ER--------ENTLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIY 519
Query: 380 M 380
+
Sbjct: 520 V 520
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 64/193 (33%), Positives = 90/193 (46%)
Query: 242 KAWKRGYLLYGPPGTGKSSL---IAAMSNYLNFDIYDLELSA--VHSNSELRRVLLSTGN 296
+A RG LL+GPPG GK+ L +AA SN F+I L++ V +L R L S
Sbjct: 359 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAR 418
Query: 297 R---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERI 353
SI+ ++++D SL E R+ + LK L+ F DG+ S GD+R+
Sbjct: 419 ELQPSIIFIDEVD-SLLCERREGEHDASRRLKT--------EFLIEF-DGVQSG-GDDRV 467
Query: 354 IVF-TTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQ 412
+V TN LD AVLR R +Y+S L N L +PL KE+ Q
Sbjct: 468 LVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNLLSKQGNPL--NEKELTQ 523
Query: 413 NVRVTPADVGEQL 425
R+T G +
Sbjct: 524 LSRLTEGYSGSDI 536
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 205 NHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 264
N TFD +A E K+ +E +E F+K+ + + VG +G LL GPPGTGK+ L A
Sbjct: 221 NTGVTFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKA 279
Query: 265 MSNYLNFDIYDLELSAVHSNSELRRVLLSTGN---RSIL--VVEDIDCSLELEDRQA--Q 317
++ + + S SE + + G R + E+ C + +++ A +
Sbjct: 280 IAGEAGVPFFSI------SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 333
Query: 318 PTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + TL+ LL +DG + G I+V TN D LD A+LRPGR D
Sbjct: 334 QRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFD 389
Score = 42 (19.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 95 NKMSISMAKNQEIVDHFDGVKLKWKQVTR 123
N +S++ Q + HF G + + V R
Sbjct: 11 NGLSVNTTTKQRLSKHFSGRQTSFSSVIR 39
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/173 (30%), Positives = 88/173 (50%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +E+++++ I E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 192 DIGGLESQIQE-IKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 250
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
+ EL + L R L + SI+ +++ID ++ + AQ
Sbjct: 251 ATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEID-AIGTKRYDAQSGAE- 308
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG +S D ++I+ T D LDPA++RPGR+D
Sbjct: 309 -----REIQRTMLELLNQLDGFDTSQRDIKVIMATNRISD-LDPALIRPGRID 355
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/204 (27%), Positives = 98/204 (48%)
Query: 183 LYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGK 242
++++ + A+ F ++ I+F + A D E K+ I+E + F+K Y ++G
Sbjct: 266 MFNVGKSRAKLFNKETDIKISFKNVAGCD------EAKQEIMEFVH-FLKNPGKYTKLGA 318
Query: 243 AWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL------ELSAVHSNSELRRVLLSTGN 296
RG +L GPPGTGK+ L A + N + E+ S +R + +
Sbjct: 319 KIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARS 378
Query: 297 R--SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERII 354
SI+ +++ID + + + + R + TL+ LL +DG +S D+ ++
Sbjct: 379 MAPSIIFIDEIDA---IGKERGKGGALGGANDER--EATLNQLLVEMDGFTTS--DQVVV 431
Query: 355 VFTTNHKDRLDPAVLRPGRMDVHI 378
+ TN D LD A++RPGR D HI
Sbjct: 432 LAGTNRPDVLDNALMRPGRFDRHI 455
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 67/243 (27%), Positives = 112/243 (46%)
Query: 209 TFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN 267
T+D + + ++LK+ I E +E +K+ + ++ G RG LLYGPPGTGK+ + A++N
Sbjct: 342 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 268 YLNFDIYDLE----LSAVHSNSE--LRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPT 319
+ + + +S + +E LR++ R SI+ ++++D R+
Sbjct: 401 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KREGAQN 458
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
V +V S LL +DG+ S + +++V TN LD A+ RPGR D I
Sbjct: 459 EVE-------KRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 510
Query: 379 YMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALK 436
+ P D L + P + E++Q VG L L NE AL+
Sbjct: 511 EIG--VPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALR 568
Query: 437 GLL 439
+L
Sbjct: 569 RVL 571
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 58/166 (34%), Positives = 82/166 (49%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMSN--YLN 270
L K I E +E V KR D ++ +G +G L+YGPPGTGK+ L AA +N +L
Sbjct: 186 LDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLK 245
Query: 271 FDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPM 330
L + ++L R + + ID EL D + R +
Sbjct: 246 LAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFID---EL-DAIGTKRFDSEKSGDREV 301
Query: 331 QVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMD 375
Q T+ LLN LDG +SS D+R+ ++ TN D LDPA+LR GR+D
Sbjct: 302 QRTMLELLNQLDG-FSS--DDRVKVLAATNRVDVLDPALLRSGRLD 344
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/174 (30%), Positives = 89/174 (51%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +EA++++M E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 185 DIGGLEAQVQEMK-EAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTS 243
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDC-SLELEDRQAQPTTV 321
+ EL + +L R L + SI+ +++ID + D Q+
Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGE-- 301
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + + D ++I+ TN + LDPA++RPGR+D
Sbjct: 302 ------REIQRTMLELLNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRID 347
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 63/193 (32%), Positives = 90/193 (46%)
Query: 242 KAWKRGYLLYGPPGTGKSSL---IAAMSNYLNFDIYDLELSA--VHSNSELRRVLLSTGN 296
+A RG LL+GPPG GK+ L +AA SN F+I L++ V +L R L S
Sbjct: 356 RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVAR 415
Query: 297 R---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERI 353
SI+ ++++D SL E R+ + LK L+ F DG+ S GD+R+
Sbjct: 416 ELQPSIIFIDEVD-SLLCERREGEHDASRRLKT--------EFLIEF-DGVQSG-GDDRV 464
Query: 354 IVF-TTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQ 412
+V TN LD AVLR R +Y++ L N L +PL KE+ Q
Sbjct: 465 LVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPL--SEKELTQ 520
Query: 413 NVRVTPADVGEQL 425
R+T G +
Sbjct: 521 LSRLTEGYSGSDI 533
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/178 (29%), Positives = 90/178 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK +++ +G A +G LLYGPPGTGK+ L A++
Sbjct: 141 STYEMIGGLDKQIKE-IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC-SLELEDRQAQ 317
++ + +L + + + R L SI+ +++ID LE
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG 259
Query: 318 PTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 260 DSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 306
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 265 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/173 (30%), Positives = 91/173 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +E+++++ I E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 187 DIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 245
Query: 271 ---FDIYDLELSAVH--SNSEL-RRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTTVN 322
I EL + L R++ + SI+ +++ID + ++ + T+
Sbjct: 246 ATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDA---IGTKRYESTSGG 302
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + GD ++I+ TN + LDPA++RPGR+D
Sbjct: 303 E----REIQRTMLELLNQLDG-FDDRGDIKVIM-ATNKIESLDPALIRPGRID 349
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 152 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 270
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 271 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 318
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 273 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/179 (29%), Positives = 90/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
++ + +L + + + R L SI+ +++ID S LE
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 273 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/173 (30%), Positives = 89/173 (51%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +E+++++ I E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 183 DIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 241
Query: 271 ---FDIYDLELSAVH--SNSEL-RRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTTVN 322
I EL + L R++ G SI+ +++ID + ++ +
Sbjct: 242 ATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDA---IGTKRYDSNSGG 298
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + GD ++I+ TN + LDPA++RPGR+D
Sbjct: 299 E----REIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRID 345
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 51/173 (29%), Positives = 89/173 (51%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D ++ ++++ I E +E + +YY +G +G +LYG PGTGK+ L A++N +
Sbjct: 189 DVGGLDQQIQE-IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTS 247
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
I EL + ++ R L SI+ +++ID + ++ +
Sbjct: 248 ATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDA---VGTKRYDSNSGG 304
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + S GD ++++ TN + LDPA++RPGR+D
Sbjct: 305 E----REIQRTMLELLNQLDG-FDSRGDVKVLM-ATNRIESLDPALIRPGRID 351
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 52/175 (29%), Positives = 87/175 (49%)
Query: 216 EAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-- 271
+ ELK + E ++ ++ + + R+G + +G LLYGPPG K+ A++ +NF
Sbjct: 521 QEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLA 580
Query: 272 ----DIYDLELSAVHSNSELRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTTVNVLK 325
+I++ + S +R + + SI+ ++ID +L DR T+
Sbjct: 581 VKGPEIFNKYVG--ESERAIREIFRKARSAAPSIIFFDEID-ALS-PDRDGSSTSA---- 632
Query: 326 PLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
L+ LLN +DG+ G +IV TN D +D A+LRPGR+D HIY+
Sbjct: 633 ----ANHVLTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHIYV 681
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 246 RGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN--SELRRVLLSTGNR------ 297
RG LL+GPPGTGK+ L+ ++N N + + ++ S E L N
Sbjct: 280 RGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQP 339
Query: 298 SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFT 357
SI+ +++ID + +A + V + ++ LL +DG+ + G + +++
Sbjct: 340 SIIFIDEID---SIAPNRANDDSGEVESRV------VATLLTLMDGM-GAAG-KVVVIAA 388
Query: 358 TNHKDRLDPAVLRPGRMDVHIYMSYC-TPCGFDTLAANYLGITDHPLIYEIKEIMQNVRV 416
TN + +DPA+ RPGR D + + FD L + ++ + + + I
Sbjct: 389 TNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASK 448
Query: 417 TPADVGEQL 425
T VG L
Sbjct: 449 THGYVGADL 457
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/164 (31%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS--NYLNF-DIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++ +F +
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGS 229
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + SI+ +++ID ++ + AQ T + R +Q
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 282
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG S + ++ TN +D LDPA+LRPGR+D
Sbjct: 283 RILLELLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLD 324
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 54/175 (30%), Positives = 86/175 (49%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
TF +A E K+ + E++ F+K D Y R+G RG LL G PGTGK+ L A++
Sbjct: 327 TFADVAGVDEAKEEL-EEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 268 ----YLNFDIYD-LELSAVHSNSELRRVLLSTGNR--SILVVEDIDCSLELEDRQAQPTT 320
+++ + +EL S +R + SI+ +++ID + D + + +
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVS 445
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + TL+ LL +DG SS I++ TN D LDPA+ RPGR D
Sbjct: 446 ND------EREQTLNQLLTEMDGFDSSSAV--IVLGATNRADVLDPALRRPGRFD 492
>TIGR_CMR|DET_1513 [details] [associations]
symbol:DET_1513 "ATPase, AAA family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0019538 "protein metabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0465 GO:GO:0017111 RefSeq:YP_182211.1
ProteinModelPortal:Q3Z6D8 STRING:Q3Z6D8 GeneID:3229236
KEGG:det:DET1513 PATRIC:21610046 HOGENOM:HOG000133135 OMA:REGMNSP
ProtClustDB:CLSK741621 BioCyc:DETH243164:GJNF-1514-MONOMER
Uniprot:Q3Z6D8
Length = 431
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 56/175 (32%), Positives = 86/175 (49%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
++D++ +E +K I + +F+K++D R+G + KRG LL G PGTGK+ + A+ +
Sbjct: 172 SWDSIILEESVKDDIYLNSVQFLKQQDRLSRLGISKKRGLLLAGEPGTGKTIVCKALMSG 231
Query: 268 -----YLNFDIYDL-ELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTV 321
+ D Y L E V E+ R L + SI+ +ED+D + D
Sbjct: 232 AKDITCITTDCYQLREAWYVDELYEIAREL----SPSIVFIEDLDLIGKSRDEYGNEAAT 287
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLR-PGRMD 375
PL S LL LDGL ++ G + + TTN D LD A++R P R D
Sbjct: 288 ----PL-------SALLAALDGLETNLGV--VTIATTNFLDSLDNALIRRPSRFD 329
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 49/167 (29%), Positives = 83/167 (49%)
Query: 224 IEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL---ELSA 280
+E++ F++ ++ R+G RG LL GPPGTGK+ L A++ N + + +
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 338
Query: 281 VHSNSELRRV--LLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLS 335
++ +RV L + + SI+ ++++D + R A+ M+ TL+
Sbjct: 339 MYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQ--KRNARDAA--------HMRQTLN 388
Query: 336 GLLNFLDGLWSSCGDERIIVF--TTNHKDRLDPAVLRPGRMDVHIYM 380
LL LDG + +VF TN + LDPA+ RPGR D HI++
Sbjct: 389 QLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 221 KMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSA 280
K +E++ +++ + R+G +G LL GPPGTGK+ L A++ +
Sbjct: 236 KAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSC---- 291
Query: 281 VHSNSELRRVLLSTGNRSI--LVVEDIDCS---LELEDRQAQPTTVNVLKPLRPMQVTLS 335
S SE + + G R + L CS + +++ A + N K + M++TL+
Sbjct: 292 --SGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNP-KDQQYMKMTLN 348
Query: 336 GLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+L LDG + G I+V TN + LD A++RPGR D HI
Sbjct: 349 QMLVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHI 389
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 76/275 (27%), Positives = 123/275 (44%)
Query: 181 LKLYSLNQDHARRFGLDSWHWITFN-HPATFDTLAMEAELKKMIIEDLERFVKRKDYYRR 239
LK + + F +T N + TF+ +A E K+ +IE ++ F+K + +++
Sbjct: 125 LKRMQIGGNRTINFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVD-FLKHRQRFQK 183
Query: 240 VGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSA-----VHSNSELRRVLLST 294
+G +G LL G PGTGK+ L A++ N + + S V + R +
Sbjct: 184 LGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQ 243
Query: 295 GNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERII 354
G ++ + ID E+ D + + + + TL+ LL +DG S+ G II
Sbjct: 244 GKKNAPCIIFID---EI-DAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--II 297
Query: 355 VFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNV 414
+ TN D LD A+LRPGR D + +S G + + N + I P ++ I
Sbjct: 298 IAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKII-N-VHIKKVPTAPDVN-IRTIA 354
Query: 415 RVTPADVGEQL--LKNEDPEIALKGLLEFLNAKLI 447
R TP G L L NE IA + LN K++
Sbjct: 355 RGTPGFSGADLANLVNEAALIAAR-----LNKKIV 384
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 76/275 (27%), Positives = 123/275 (44%)
Query: 181 LKLYSLNQDHARRFGLDSWHWITFN-HPATFDTLAMEAELKKMIIEDLERFVKRKDYYRR 239
LK + + F +T N + TF+ +A E K+ +IE ++ F+K + +++
Sbjct: 125 LKRMQIGGNRTINFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVD-FLKHRQRFQK 183
Query: 240 VGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSA-----VHSNSELRRVLLST 294
+G +G LL G PGTGK+ L A++ N + + S V + R +
Sbjct: 184 LGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQ 243
Query: 295 GNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERII 354
G ++ + ID E+ D + + + + TL+ LL +DG S+ G II
Sbjct: 244 GKKNAPCIIFID---EI-DAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--II 297
Query: 355 VFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQNV 414
+ TN D LD A+LRPGR D + +S G + + N + I P ++ I
Sbjct: 298 IAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKII-N-VHIKKVPTAPDVN-IRTIA 354
Query: 415 RVTPADVGEQL--LKNEDPEIALKGLLEFLNAKLI 447
R TP G L L NE IA + LN K++
Sbjct: 355 RGTPGFSGADLANLVNEAALIAAR-----LNKKIV 384
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 58/182 (31%), Positives = 87/182 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF +A E+K+ + E +E F+K Y +G +G LL+G PGTGK+ L A++
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 269 LNFDIYDLELSA-----VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
+ + S V + R L ++ + ID ++ RQ + +
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID-EIDAVGRQ-RGAGLGG 272
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
R + TL+ LL +DG S+ G II+ TN D LDPA+LRPGR D HI +
Sbjct: 273 GHDER--EQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHIVVD-- 326
Query: 384 TP 385
TP
Sbjct: 327 TP 328
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 58/182 (31%), Positives = 87/182 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF +A E+K+ + E +E F+K Y +G +G LL+G PGTGK+ L A++
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 269 LNFDIYDLELSA-----VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
+ + S V + R L ++ + ID ++ RQ + +
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID-EIDAVGRQ-RGAGLGG 272
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYC 383
R + TL+ LL +DG S+ G II+ TN D LDPA+LRPGR D HI +
Sbjct: 273 GHDER--EQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHIVVD-- 326
Query: 384 TP 385
TP
Sbjct: 327 TP 328
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 147 (56.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 51/173 (29%), Positives = 88/173 (50%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +E+++++ + E +E + + Y +G +G +LYG PGTGK+ L A++N +
Sbjct: 205 DIGGLESQIQE-VRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 263
Query: 271 ---FDIYDLELSAVH--SNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVN 322
I EL + L R + SI+ +++ID + ++ T+
Sbjct: 264 ATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDA---IGTKRYDSTSGG 320
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG + GD ++I+ TN + LDPA++RPGR+D
Sbjct: 321 E----REIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRID 367
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFD---IYDL 276
K+ I E +E + Y+++G RG LL+GPPG GK+ L A++++ +
Sbjct: 161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGS 220
Query: 277 ELSAVHSNSELRRV-----LLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L + SI+ +++ID ++ + AQ T + R +Q
Sbjct: 221 EFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 273
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 274 RILLELLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLD 315
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 136 (52.9 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF+ + E K+ + E +E F+K + +G +G LL GPPGTGK+ L A++
Sbjct: 281 TFEHVKGVEEAKQELQEVVE-FLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 269 LNFDIYDLELSAVHSNSELRRVLLSTGN---RSIL--VVEDIDCSLELEDRQAQPTTVNV 323
+ Y S SE + + G RS+ + C + +++ + +
Sbjct: 340 ADVPFY------YASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGK-RI 392
Query: 324 LKPLRPM-QVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
P+ P + T++ LL +DG + G +I+ TN + LD A++RPGR D+ +
Sbjct: 393 ESPMHPYSRQTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRPGRFDMQV 446
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 21/88 (23%), Positives = 37/88 (42%)
Query: 108 VDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSYFPYI 167
+ HF W ++ ++S + + +S ++QS F T K +L + I
Sbjct: 130 LQHFSSELRCWPEMQVYIQSRSFKTLRSRSRRLQSTTEQFTET--KSSLPSLLKGF---I 184
Query: 168 LRKSKSAQEENKTL-KLYSLNQDHARRF 194
LRK + E TL K ++ + H F
Sbjct: 185 LRKRRIDVENLDTLMKTKNIPEAHQDAF 212
Score = 43 (20.2 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 430 DPEIALKGLLEFLNAKLIEGCESQAS 455
DPEI +G + F A+L E +QA+
Sbjct: 474 DPEIIARGTVGFSGAEL-ENLVNQAA 498
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 57/196 (29%), Positives = 93/196 (47%)
Query: 188 QDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRG 247
Q ++R G + +++N+ ++ +E L+ I++ +KR + Y+ VG + G
Sbjct: 475 QPSSKREGFATVPGVSWNNIGALKSIRVE--LQMAIVQP----IKRPELYQSVGISAPTG 528
Query: 248 YLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRRVLLSTGNRSILV 301
LL+GPPG GK+ L A++N NF I EL + S +R+V L S V
Sbjct: 529 VLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCV 588
Query: 302 V--EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTN 359
+ +++D + D + V+ L L LDGL G ++ TN
Sbjct: 589 IFFDELDAMVPRRDDSLSEASSRVVNTL----------LTELDGLSDRSGV--YVIAATN 636
Query: 360 HKDRLDPAVLRPGRMD 375
D +DPA+LRPGR+D
Sbjct: 637 RPDIIDPAMLRPGRLD 652
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 103 (41.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 191 ARRFGLDSWHWITFNHP-ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYL 249
A FG +T H TFD +A E K+ + E++ F++ + R+G +G L
Sbjct: 135 AMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGAL 193
Query: 250 LYGPPGTGKSSLIAAMS 266
L GPPGTGK+ L A++
Sbjct: 194 LVGPPGTGKTLLARAIA 210
Score = 93 (37.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
TL+ LL +DG ++ G II+ TN KD LDPA+LRPGR D ++
Sbjct: 278 TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 103 (41.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 191 ARRFGLDSWHWITFNHP-ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYL 249
A FG +T H TFD +A E K+ + E++ F++ + R+G +G L
Sbjct: 135 AMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGAL 193
Query: 250 LYGPPGTGKSSLIAAMS 266
L GPPGTGK+ L A++
Sbjct: 194 LVGPPGTGKTLLARAIA 210
Score = 93 (37.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
TL+ LL +DG ++ G II+ TN KD LDPA+LRPGR D ++
Sbjct: 278 TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 166 YILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIE 225
++ R+S A ++ ++ L++ A++F ++ I F A D E K+ I+E
Sbjct: 310 WLTRRSAQAAGGSRG-GIFGLSRSKAKKFNTETDVKIKFKDVAGCD------EAKEEIME 362
Query: 226 DLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSA----- 280
+ F+K Y ++G RG +L GPPGTGK+ L A + Y + S
Sbjct: 363 FVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMF 421
Query: 281 VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGL 337
V + R L T SI+ +++ID + Q + R + TL+ +
Sbjct: 422 VGVGAARVRDLFKTARENAPSIVFIDEIDAI----GKARQKGNFSGANDER--ENTLNQM 475
Query: 338 LNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
L +DG + D +++ TN D LD A+LRPGR D HI
Sbjct: 476 LVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRFDRHI 514
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 51/177 (28%), Positives = 91/177 (51%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ + E +E VK + + +G + +G LLYGPPGTGK+ L A++
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQP 318
++ + +L + S + R L SI+ +++ID S+ + + +
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQRIEGEH 293
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
V Q T+ LLN LDG S+ + ++ TN D LD A+LRPGR+D
Sbjct: 294 GDSEV-------QRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRID 341
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 51/177 (28%), Positives = 91/177 (51%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ + E +E VK + + +G + +G LLYGPPGTGK+ L A++
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 267 NYLNFDIY-----DLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQP 318
++ + +L + S + R L SI+ +++ID S+ + + +
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQRIEGEH 293
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
V Q T+ LLN LDG S+ + ++ TN D LD A+LRPGR+D
Sbjct: 294 GDSEV-------QRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRID 341
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 124 (48.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 27 ELVPHELKLFVLMNIRGLFESF-SSEITLIIDQFDGLASNQIYRAADIYLGNKISP-STK 84
E +P ++ F++ F + +S T II++ NQ +RAA +YL +S +T+
Sbjct: 35 EFIPVNIRDFIISKFTDYFSFYLNSNFTFIIEEQSDYVMNQTFRAAQVYLPTLLSRITTR 94
Query: 85 MFRVSMPEKENKMS---ISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVS 132
VS + +N M+ + +I+D F+G++L+W ++ + Y S
Sbjct: 95 SLLVSSSDLKNPMAKPKFGIPVKAKIIDEFEGIRLEWTLLSAKDNDNPYQS 145
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 148 (57.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 53/163 (32%), Positives = 77/163 (47%)
Query: 238 RRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSN--SELRRVLLST- 294
R +G W RG LLYGPPGTGK+SL+ A+ + + L +VH E +VL
Sbjct: 49 RTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAF 108
Query: 295 GNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ----VTL-SGLLNFLDGLWSSCG 349
S V D + +++ ++VL P R + V + S L +D S
Sbjct: 109 AEASSHAVSDKPSVIFIDE-------IDVLCPRRDARREQDVRIASQLFTLMDSNKPSSS 161
Query: 350 DERIIVF-TTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTL 391
R++V +TN D +DPA+ R GR D + +S TP D L
Sbjct: 162 APRVVVVASTNRVDAIDPALRRAGRFDALVEVS--TPNEEDRL 202
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 50/182 (27%), Positives = 86/182 (47%)
Query: 202 ITFNHP-ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 260
IT P T+D + +LKK + + +E +K + ++G + RG LL+GPPG K++
Sbjct: 276 ITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTT 335
Query: 261 LIAAMSNYLNFDIYDLELSAVHSN--SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQP 318
L A +N + L + + S E +L +T R+ L I E + +
Sbjct: 336 LAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKR 395
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+ + LS LL +DGL + G +++ TN +D A++RPGR D+ +
Sbjct: 396 GDESSSNSSTVGERLLSTLLTEMDGLEEAKGI--LVLAATNRPYAIDAALMRPGRFDLVL 453
Query: 379 YM 380
Y+
Sbjct: 454 YV 455
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 147 (56.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 52/179 (29%), Positives = 91/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LL+GPPGTGK+ L A++
Sbjct: 156 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 267 N-----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
+ ++ +L + + + R L SI+ +++ID S +E
Sbjct: 215 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 274
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LDPA+LRPGR+D
Sbjct: 275 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 322
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 371 PGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQ 412
PG + S CT G L + +T + ++MQ
Sbjct: 362 PGASGAEV-KSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQ 402
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 149 (57.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 65/234 (27%), Positives = 109/234 (46%)
Query: 218 ELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIY 274
E+K ++E +E K +D ++R+G G L++GPPG K+ + A+++ LNF +
Sbjct: 731 EVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVK 790
Query: 275 DLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRP 329
EL + V + + R L + SI+ ++ID + ++ +V+
Sbjct: 791 GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVS------- 843
Query: 330 MQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFD 389
+S LL LDGL G ++ TN D++D A+LRPGR D +Y+ P D
Sbjct: 844 -DRVMSQLLVELDGLHQRVGVT--VIAATNRPDKIDSALLRPGRFDRLLYVG--PPNETD 898
Query: 390 TLAANYLGITDHPLIYEI--KEIMQNVR-VTPADVGEQLLKNEDPEIALKGLLE 440
A + + P +I KE+ + T AD+ L+ E AL+ LE
Sbjct: 899 REAILKIHLRKIPCSSDICLKELASITKGYTGADIS--LICREAAIAALEESLE 950
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/164 (26%), Positives = 76/164 (46%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLE----L 278
I+ D+ K+ +G +G L++GPPGTGK+SL + + + + + +
Sbjct: 396 ILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEII 455
Query: 279 SAVHSNSE--LRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
S SE L V S N + ++ ++D+D + + Q +
Sbjct: 456 SQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELS----------QRMV 505
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHI 378
+ LLN +DG+ S D +++ TN D ++PA+ RPGR+D I
Sbjct: 506 ATLLNLMDGI--SRTDGVVVIAATNRPDSIEPALRRPGRLDREI 547
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 224 IEDL-ERFVK---RKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS 279
IEDL E V K+ + ++G +G L++GPPGTGK+ L A ++ N L
Sbjct: 195 IEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKL--- 251
Query: 280 AVHSNSELRRVLLSTGNRSI-----LVVEDIDCSLELEDRQAQPTTV--NVLKPLRPMQV 332
+ +L ++ + G + + L E + +++ A T + L R +Q
Sbjct: 252 ---AGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQR 308
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSY 382
T+ LLN LDG S D ++ TN D LDPA+LR GR+D I + +
Sbjct: 309 TMLELLNQLDGF--STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 224 IEDL-ERFVK---RKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELS 279
IEDL E V K+ + ++G +G L++GPPGTGK+ L A ++ N L
Sbjct: 195 IEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKL--- 251
Query: 280 AVHSNSELRRVLLSTGNRSI-----LVVEDIDCSLELEDRQAQPTTV--NVLKPLRPMQV 332
+ +L ++ + G + + L E + +++ A T + L R +Q
Sbjct: 252 ---AGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQR 308
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSY 382
T+ LLN LDG S D ++ TN D LDPA+LR GR+D I + +
Sbjct: 309 TMLELLNQLDGF--STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 150 (57.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T+D + +K ++E ++ ++R + + + G + G L YGPPGTGK+ L A++
Sbjct: 994 TWDDVGGLGNVKDAVMETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATE 1052
Query: 268 Y-LNF-DIYDLELSAVH---SNSELRRVLLSTGNRSILVV--EDIDCSLELEDRQAQPTT 320
Y LNF + EL ++ S + +RRV + VV +++D Q
Sbjct: 1053 YSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGG 1112
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDER----IIVFTTNHKDRLDPAVLRPGRMDV 376
V M +S LL LDG+ S GD+ ++ TN D LD A+LRPGR D
Sbjct: 1113 V--------MDRIVSQLLAELDGM--SSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDK 1162
Query: 377 HIYM 380
+Y+
Sbjct: 1163 LLYL 1166
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 205 NHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAA 264
++ TF +A E K+ + E +E F++ ++++G +G LL GPPGTGK+ L A
Sbjct: 151 SNKVTFHDVAGIDEAKEELAEIVE-FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKA 209
Query: 265 MSNYLNFDIYDLELSA-----VHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPT 319
++ + + S V + R + G ++ + ID E+ D +
Sbjct: 210 IAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFID---EI-DAVGRHR 265
Query: 320 TVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIY 379
V + TL+ LL +DG ++ G II+ TN D LDPA+LRPGR D I
Sbjct: 266 GVGFGGGNDEREQTLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQIT 323
Query: 380 MSYCTPCGFDTLAANYLG-ITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALK 436
+S G + +L I P + E+ I R TP G L L NE IA +
Sbjct: 324 ISIPDIAGRQKILEVHLKKIPTAPNV-EVSII---ARGTPGFSGADLANLVNESALIAAR 379
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 72/248 (29%), Positives = 108/248 (43%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMSN--YLN 270
L K I E +E V K+ + +G +G L+YGPPGTGK+ L AA +N YL
Sbjct: 173 LDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLK 232
Query: 271 FDIYDLELSAVHSNSELRR---VLLSTGNRSILVVEDIDC-SLELEDRQAQPTTVNVLKP 326
L + ++L R L +I+ ++++D + D +
Sbjct: 233 LAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGD------- 285
Query: 327 LRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPC 386
R +Q T+ LLN LDG +SS + ++I TN D LDPA+LR GR+D I P
Sbjct: 286 -REVQRTMLELLNQLDG-FSSDANIKVIA-ATNRIDILDPALLRSGRLDRKIEF----PL 338
Query: 387 GFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQLLKN---EDPEIALK-GLLEFL 442
+ A+ L I + + + D LK E IAL+ G E +
Sbjct: 339 PNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELI 398
Query: 443 NAKLIEGC 450
+ +EGC
Sbjct: 399 HNDFVEGC 406
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 147 (56.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 51/169 (30%), Positives = 86/169 (50%)
Query: 218 ELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYL--NF-DIY 274
E+K+ +IE ++ V + +++ G + RG L YGPPGTGK+ L A++N NF +
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 275 DLELSAV---HSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
EL ++ S S +R + + VV +D EL D A+ +V
Sbjct: 566 GPELLSMWFGESESNIRDIFDKARAAAPCVVF-LD---EL-DSIAKSRGGSVGDAGGASD 620
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ LL +DG+ S ++ TN ++LD A++RPGR+D +Y+
Sbjct: 621 RVVNQLLTEMDGMTSK--KNVFVIGATNRPEQLDAALVRPGRLDTLVYV 667
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDLELS 279
I E +E ++ ++ +G RG L+YGPPGTGK+ + A++N F I E+
Sbjct: 237 IRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 296
Query: 280 ---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
A S S LR+ S I+ +++ID ++ T V + + +
Sbjct: 297 SKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK----TNGEVERRV------V 346
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCG 387
S LL +DG+ +++ TN + +DPA+ R GR D + + P G
Sbjct: 347 SQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 145 (56.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 52/179 (29%), Positives = 91/179 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++K+ I E +E VK + + +G A +G LLYGPPGTGK+ L A++
Sbjct: 172 STYEMVGGLDTQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 267 N-----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC--SLELEDRQA 316
+ ++ +L + + + R L SI+ +++ID S +E +
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 290
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ V Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 291 GDSEV---------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 338
Score = 39 (18.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 371 PGRMDVHIYMSYCTPCGFDTLAANYLGITDHPLIYEIKEIMQ 412
PG + S CT G L + +T + ++MQ
Sbjct: 378 PGASGAEV-KSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQ 418
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/164 (30%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFD---IYDL 276
K+ I E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 169 KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGS 228
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 229 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 281
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 282 RILLELLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 323
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/173 (30%), Positives = 90/173 (52%)
Query: 211 DTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN 270
D +M+ + K+ + E +E + + Y+++G RG L+YGPPG GK+ L +++++
Sbjct: 115 DIGSMDIQ-KQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMI 173
Query: 271 FD-IYDLELSAVHSN-SELRRVL-----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVN 322
I+ + VH E R++ L N +I+ +++ID ++ + AQ T +
Sbjct: 174 AAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEID-AIATKRFDAQ-TGAD 231
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
R +Q L LLN +DG + + I+ TN KD LDP +LRPG +D
Sbjct: 232 -----REVQRILLELLNQMDGFDQNISVKAIMA--TNRKDTLDPTLLRPGHLD 277
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/246 (26%), Positives = 113/246 (45%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY 268
TF+ +A E K+ + E++ +F+K + ++G +G LL GPPGTGK+ L A++
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 269 LNFDIYDLELSAVHSNSELRRVLLSTGNRSI--LVVE---DIDCSLELEDRQA--QPTTV 321
+ + S S+ + + G + L V+ + C + +++ A +
Sbjct: 210 AGVPFFSI------SGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGA 263
Query: 322 NVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMS 381
+ + TL+ LL +DG S+ G I++ TN D LDPA+LRPGR D + +
Sbjct: 264 GLGGGHDEREQTLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQVVVP 321
Query: 382 YCTPCGFDTLAANYLGITDHPLIYEIKEIMQNVRVTPADVGEQL--LKNEDPEIALKGLL 439
G + + + T PL ++ ++ R TP G L + NE +A +
Sbjct: 322 QPDVKGREMILKVHTKKT--PLASDV-DLGVIARGTPGFSGADLSNVVNEAALLAARKDK 378
Query: 440 EFLNAK 445
F+ K
Sbjct: 379 SFVEMK 384
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 187 NQDHAR----RFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGK 242
NQ+H + L+S H TF+ +A E+K M + +L F++ Y+ G
Sbjct: 124 NQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEVK-MELSELVDFLQNPKKYKEFGV 182
Query: 243 AWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSA---VHSNSELRRV--LLSTGNR 297
+G L+ GPPG GK+ + A++ + S+ ++ +RV L S
Sbjct: 183 KMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKM 242
Query: 298 ---SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERII 354
SI+ +++ID +A+ NV + TL+ LL +DG + G I+
Sbjct: 243 MAPSIVFIDEIDAV-----GKARGEMSNVER-----DSTLNQLLTQMDGFEDNSGV--IV 290
Query: 355 VFTTNHKDRLDPAVLRPGRMDVHIYMS 381
+ TN + +DPA+LR GR D I++S
Sbjct: 291 IAATNKIELMDPALLRSGRFDRRIFLS 317
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 146 (56.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 50/183 (27%), Positives = 97/183 (53%)
Query: 205 NHPATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 263
N T++ L M+ +L K I E +E +K + + +G + +G L++G PGTGK+S+
Sbjct: 521 NDDITYEDLGGMKKQLNK-IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAK 579
Query: 264 AMSNYLNFDIYDL---ELSAVH---SNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQ 315
A++N N Y + E+ + H S +LR++ ++ I+ +++ID + +++
Sbjct: 580 AIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID---SIANKR 636
Query: 316 AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
++ N L+ + +S LL +DGL + + +++ TN + +DPA+ R GR D
Sbjct: 637 SKSN--NELE-----KRVVSQLLTLMDGLKKN--NNVLVLAATNRPNSIDPALRRFGRFD 687
Query: 376 VHI 378
I
Sbjct: 688 REI 690
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 82/325 (25%), Positives = 147/325 (45%)
Query: 77 NKISPSTKMFRVS-----MPEKENKMS--ISMAKNQEIVDHF-DGVKLKWKQVTRQVEST 128
NK+S T MF ++ + +N+M+ S K + +D++ + + ++ + +S
Sbjct: 799 NKLS-YTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDALDNYKNDSTIDMEKKKNKKKSN 857
Query: 129 QYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSY--FP-YILRK-SKSAQEENKTLKLY 184
+ S + TK +++ N K DK+ + P YIL K + A+ L +
Sbjct: 858 FFFSNDDEETKNKNKTNV-NQKKKKNPNDKLDKNERRIPAYILNKLTIKAKHFQHALNIC 916
Query: 185 SLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAW 244
+ + R+ + + +T+N + + + +LK+ I+ LE K Y + +
Sbjct: 917 NPSSLRERQVQIPT---VTWNDIGGMNEV--KEQLKETILYPLEY----KHLYNKFNSNY 967
Query: 245 KRGYLLYGPPGTGKSSLIAAMSNYL--NF-DIYDLELSAV---HSNSELRRVL--LSTGN 296
+G LLYGPPG GK+ L A++N NF + EL + S + +R + +
Sbjct: 968 NKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAAS 1027
Query: 297 RSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF 356
I+ ++ID SL E R + T N ++ +L +DG+ I+
Sbjct: 1028 PCIIFFDEID-SLAKE-RNSN--TNNDASDR-----VINQILTEIDGINEK--KTIFIIA 1076
Query: 357 TTNHKDRLDPAVLRPGRMDVHIYMS 381
TN D LD A+ RPGR+D IY+S
Sbjct: 1077 ATNRPDILDKALTRPGRLDKLIYIS 1101
Score = 49 (22.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 94 ENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHK 153
E K I Q+I++ D K + K +T + + + ++ Y N +K
Sbjct: 158 EGKKEIHNT-TQKILEKVDYFKEREK-ITNSYNNNNNNNKVIVTHDNKNHTNYINKVENK 215
Query: 154 QHKDKVLNSYFPYILRKSKSAQEENKTL 181
Q DK+ N YI +K KS +N L
Sbjct: 216 QSDDKIKNLNNKYI-KKFKSHILQNDIL 242
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 146 (56.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 50/183 (27%), Positives = 97/183 (53%)
Query: 205 NHPATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIA 263
N T++ L M+ +L K I E +E +K + + +G + +G L++G PGTGK+S+
Sbjct: 521 NDDITYEDLGGMKKQLNK-IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAK 579
Query: 264 AMSNYLNFDIYDL---ELSAVH---SNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQ 315
A++N N Y + E+ + H S +LR++ ++ I+ +++ID + +++
Sbjct: 580 AIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID---SIANKR 636
Query: 316 AQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
++ N L+ + +S LL +DGL + + +++ TN + +DPA+ R GR D
Sbjct: 637 SKSN--NELE-----KRVVSQLLTLMDGLKKN--NNVLVLAATNRPNSIDPALRRFGRFD 687
Query: 376 VHI 378
I
Sbjct: 688 REI 690
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 82/325 (25%), Positives = 147/325 (45%)
Query: 77 NKISPSTKMFRVS-----MPEKENKMS--ISMAKNQEIVDHF-DGVKLKWKQVTRQVEST 128
NK+S T MF ++ + +N+M+ S K + +D++ + + ++ + +S
Sbjct: 799 NKLS-YTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDALDNYKNDSTIDMEKKKNKKKSN 857
Query: 129 QYVSYTGQSTKMQSEIRYFNLTFHKQHKDKVLNSY--FP-YILRK-SKSAQEENKTLKLY 184
+ S + TK +++ N K DK+ + P YIL K + A+ L +
Sbjct: 858 FFFSNDDEETKNKNKTNV-NQKKKKNPNDKLDKNERRIPAYILNKLTIKAKHFQHALNIC 916
Query: 185 SLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAW 244
+ + R+ + + +T+N + + + +LK+ I+ LE K Y + +
Sbjct: 917 NPSSLRERQVQIPT---VTWNDIGGMNEV--KEQLKETILYPLEY----KHLYNKFNSNY 967
Query: 245 KRGYLLYGPPGTGKSSLIAAMSNYL--NF-DIYDLELSAV---HSNSELRRVL--LSTGN 296
+G LLYGPPG GK+ L A++N NF + EL + S + +R + +
Sbjct: 968 NKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAAS 1027
Query: 297 RSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVF 356
I+ ++ID SL E R + T N ++ +L +DG+ I+
Sbjct: 1028 PCIIFFDEID-SLAKE-RNSN--TNNDASDR-----VINQILTEIDGINEK--KTIFIIA 1076
Query: 357 TTNHKDRLDPAVLRPGRMDVHIYMS 381
TN D LD A+ RPGR+D IY+S
Sbjct: 1077 ATNRPDILDKALTRPGRLDKLIYIS 1101
Score = 49 (22.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 94 ENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHK 153
E K I Q+I++ D K + K +T + + + ++ Y N +K
Sbjct: 158 EGKKEIHNT-TQKILEKVDYFKEREK-ITNSYNNNNNNNKVIVTHDNKNHTNYINKVENK 215
Query: 154 QHKDKVLNSYFPYILRKSKSAQEENKTL 181
Q DK+ N YI +K KS +N L
Sbjct: 216 QSDDKIKNLNNKYI-KKFKSHILQNDIL 242
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 221 KMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL---E 277
KM +++ ++K D Y ++G +G LL GPPG GK+ L A++ + E
Sbjct: 291 KMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSE 350
Query: 278 LSAVHSN---SELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQV 332
V + +R + R+ I+ +++ID + + T V+ Q
Sbjct: 351 FVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAV-----GKKRSTNVSGFANAEEEQ- 404
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
TL+ LL +DG+ ++ D I++ +TN D LD A++RPGR+D HI++ T
Sbjct: 405 TLNQLLVEMDGMGTT--DHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPT 454
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 173 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 232
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 233 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 285
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 286 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 327
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 220 KKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDIYDL 276
K+ + E +E + + Y+++G RG L+YGPPG GK+ L A++++ +
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 277 ELSAVHSNSELRRVL----LSTGNR-SILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQ 331
E + R V L+ N +I+ +++ID ++ + AQ T + R +Q
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQ-TGAD-----REVQ 286
Query: 332 VTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
L LLN +DG + + ++ TN D LDPA+LRPGR+D
Sbjct: 287 RILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 181 LKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRV 240
LK Q A+R G + +T+ + + +E L I++ +KR + Y +V
Sbjct: 509 LKALPTIQPTAKREGFATVPDVTWANVGALQRVRLE--LNMAIVQP----IKRPELYEKV 562
Query: 241 GKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSIL 300
G + G LL+GPPG GK+ L A++N + ++ EL + RSI
Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIK------GPELLNKYVGESERSIR 616
Query: 301 VV-----EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDER--I 353
V + C + ++ A + +V ++ LL LDGL D R
Sbjct: 617 QVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV-VNTLLTELDGL----NDRRGIF 671
Query: 354 IVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ TN D +DPA+LRPGR+D +++
Sbjct: 672 VIGATNRPDMIDPAMLRPGRLDKSLFI 698
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/180 (30%), Positives = 86/180 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS-N 267
T+D + +K I++ ++ +K + + G + G L YGPPGTGK+ + A++ N
Sbjct: 730 TWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATN 788
Query: 268 Y-LNF-DIYDLELSAVH---SNSELRRVLLSTGNRSILVV--EDIDCSLELEDRQAQPTT 320
+ LNF + EL ++ S + +RRV V+ ++ID Q
Sbjct: 789 FSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGG 848
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
V M +S LL LDG+ S+ D ++ TN D LD A+LRPGR D +Y+
Sbjct: 849 V--------MDRIVSQLLAELDGM-STDADGVFVIGATNRPDLLDEALLRPGRFDKLLYL 899
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 210 FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYL 269
FD +A E K+ + +++ F+K+ + + VG +G LL GPPGTGK+ L A++
Sbjct: 171 FDDVAGIDEAKEEL-QEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 270 NFDIYDLELSAVHSNSELRRVLLSTGN---RSIL--VVEDIDCSLELEDRQA--QPTTVN 322
+ + S SE + + G R + E+ C + +++ A +
Sbjct: 230 GVPFFSI------SGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAG 283
Query: 323 VLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+ + TL+ LL +DG + G II+ TN D LD A++RPGR D
Sbjct: 284 IGGGNDEREQTLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGRFD 334
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 68/268 (25%), Positives = 112/268 (41%)
Query: 163 YFPYILRKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKM 222
+ P +L S E T+K N + + F + + T P +FD + E+K+
Sbjct: 256 WLPVLLFLVYSLTSETSTVK--EANGNKPQYFAKE--YDETNQTPTSFDDVKGIQEVKEE 311
Query: 223 IIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVH 282
+ E++ ++ Y +G +G LL G PGTGK+ L A++ L
Sbjct: 312 L-EEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSF----LYTTG 366
Query: 283 SNSELRRVLLSTGNRSILVV-----EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGL 337
S+ + + V G+R + + E C + +++ A + N TL L
Sbjct: 367 SSFDEKYV--GVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRNTAHH----NETLLQL 420
Query: 338 LNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLAANYLG 397
L +DG + + +I+ TN + LDPA+LRPGR D HI + G + +YL
Sbjct: 421 LTEMDGFEGN--SQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLK 478
Query: 398 ITDHPLIYEIKEIMQNVRVTPADVGEQL 425
H + + I R TP G L
Sbjct: 479 KVKHTVEVKADTI---ARATPGFTGADL 503
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 66/260 (25%), Positives = 113/260 (43%)
Query: 210 FDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYL 269
F +A +E K+ + E ++ ++K + Y+R+G RG LL GPPG GK+ L A++
Sbjct: 340 FRDVAGLSEAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEA 398
Query: 270 NFDIYDLE----LSAVHSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVL 324
+ + + R R L G + + ID ++ RQ T
Sbjct: 399 QVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYID-EIDAIGRQRSGTESMGQ 457
Query: 325 KPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
+ TL+ LL +DG+ + G +++ +TN D LD A+LRPGR D HI + T
Sbjct: 458 GSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHILIDLPT 515
Query: 385 PCGFDTLAANYLG---ITDHPLIYEIKEIMQNVRVTPADVG----EQLL---KNEDPEIA 434
+ +L + P + + + AD+ E L +N E++
Sbjct: 516 LAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVS 575
Query: 435 LKGLLEFLNAKLIEGCESQA 454
K L E+ +L+ G E ++
Sbjct: 576 SKNL-EYAVERLVGGTEKRS 594
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 144 (55.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 56/166 (33%), Positives = 79/166 (47%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMSN--YLN 270
L K I E +E V K+ D ++ +G +G L+YGPPGTGK+ L AA S +L
Sbjct: 205 LDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLK 264
Query: 271 FDIYDLELSAVHSNSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPM 330
L + ++L R + + ID EL D + R +
Sbjct: 265 LAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFID---EL-DAIGTKRFDSDKSGDREV 320
Query: 331 QVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMD 375
Q T+ LLN LDG S D+R+ ++ TN D LDPA+LR GR+D
Sbjct: 321 QRTMLELLNQLDGFGS---DDRVKVLAATNRVDTLDPALLRSGRLD 363
Score = 38 (18.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/80 (21%), Positives = 35/80 (43%)
Query: 119 KQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKDK-VLNSYFPYILRKSKSAQEE 177
K +++ +Q + T ST + E N + D+ +LNS I+ ++K +
Sbjct: 5 KNARERLDLSQLQNTTTVSTMVTLEDLENNQQQEENVIDQEILNSSTSDIINRTKLLDND 64
Query: 178 NKTLKLYSLNQDHARRFGLD 197
K ++ S +H + L+
Sbjct: 65 IKVMRSESQRLNHEKTVMLE 84
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 142 (55.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 55/170 (32%), Positives = 84/170 (49%)
Query: 219 LKKMIIEDLERFV---KRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMSN--YLN 270
L K I E +E V K + ++++G +G L+YGPPGTGK+ L AA +N +L
Sbjct: 216 LDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLK 275
Query: 271 FDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDC-SLELEDRQAQPTTVNVLKP 326
L + ++L R + SI+ ++++D + D +
Sbjct: 276 LAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGD------- 328
Query: 327 LRPMQVTLSGLLNFLDGLWSSCGDERI-IVFTTNHKDRLDPAVLRPGRMD 375
R +Q T+ LLN LDG S D+RI ++ TN D LDPA+LR GR+D
Sbjct: 329 -REVQRTMLELLNQLDGFAS---DDRIKVLAATNRVDVLDPALLRSGRLD 374
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 94 ENKMSISMAKNQEIVDHFDGVKLKWKQVTRQVESTQYVSY 133
EN++ I ++ Q + + +K K K ++E+ + + Y
Sbjct: 73 ENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENNRQLPY 112
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 221 KMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL---E 277
KM +++ ++K D Y ++G +G LL GPPG GK+ L A++ + E
Sbjct: 309 KMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSE 368
Query: 278 LSAVHSN---SELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQV 332
V + +R + R+ I+ +++ID + + T ++ Q
Sbjct: 369 FVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAV-----GKKRSTNMSGFSNTEEEQ- 422
Query: 333 TLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCT 384
TL+ LL +DG+ ++ D I++ +TN D LD A++RPGR+D HI++ T
Sbjct: 423 TLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALMRPGRLDRHIFIDLPT 472
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 176 EENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKD 235
E N + S Q A+R G ++T + D A+E ++++ + + V+ D
Sbjct: 276 ELNDFIVALSSVQPSAKREG-----FVTVPNVTWADIGALE-DIREELTMAILAPVRNPD 329
Query: 236 YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRR 289
++ +G G LL GPPG GK+ L A++N LNF + EL ++ S +R+
Sbjct: 330 QFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 389
Query: 290 VLLSTGNRSILVV--EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSS 347
V N + V+ +++D + +V V+ L L +DGL
Sbjct: 390 VFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQL----------LTEMDGL--E 437
Query: 348 CGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLA 392
+ I+ TN D +DPA+LRPGR+D +++ P D LA
Sbjct: 438 ARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLA 480
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 117 (46.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 210 FDTLAMEAELKKMIIEDLERFVK-RKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 265
FD +A + EL K ++++ R + + + +A RG LL+GPPG GK+ L +AA
Sbjct: 13 FDDIAGQ-ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAE 70
Query: 266 SNYLNFDIYDLELSA--VHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQPTT 320
SN F+I L++ V +L R L + SI+ ++++D SL E R+ +
Sbjct: 71 SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLRERREGEHDA 129
Query: 321 VNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIV 355
LK L+ F DG+ S GD+R++V
Sbjct: 130 SRRLKT--------EFLIEF-DGV-QSAGDDRVLV 154
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/200 (26%), Positives = 89/200 (44%)
Query: 189 DHARRFGLDSWHWITFNHPA-TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRG 247
+ A FG + P TF +A E K+ + E +E F+K ++ ++ +G +G
Sbjct: 136 NQAVSFGRSKAKLFNMDKPTITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKG 194
Query: 248 YLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHSNSELRRVLLSTGNRSILVVED--- 304
LL GPPGTGK+ L A++ + + S SE + + G + + D
Sbjct: 195 ILLIGPPGTGKTLLAKAIAGEAGVPFFSI------SGSEFVEMFVGVGASRVRDLFDQAK 248
Query: 305 --IDCSLELEDRQA--QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNH 360
C + +++ A + + + TL+ +L +DG I++ TN
Sbjct: 249 KNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQILVEMDGF--DTDTSVIVIAATNR 306
Query: 361 KDRLDPAVLRPGRMDVHIYM 380
D LDPA+LRPGR D + +
Sbjct: 307 PDILDPALLRPGRFDRRVVL 326
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 62/212 (29%), Positives = 98/212 (46%)
Query: 183 LYSLNQDHARR---FGLDSWHWITFNHPATFDTLAMEAELKKMIIE--DLERFVKRKDYY 237
++S Q AR FG ++ + P T T A A + + + E +++ F++ Y
Sbjct: 131 MFSRMQGGARMGFGFGKSRAKQLSKDMPKT--TFADVAGVDEAVEELYEIKDFLQNPSRY 188
Query: 238 RRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL------ELSAVHSNSELRRVL 291
+ +G +G LLYGPPGTGK+ L A++ + + E+ S +R +
Sbjct: 189 QALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLF 248
Query: 292 LSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCG 349
S I+ V++ID RQ + + R + TL+ LL +DG G
Sbjct: 249 EQAKQNSPCIIFVDEIDAV----GRQ-RGAGLGGGHDER--EQTLNQLLVEMDGFGDRAG 301
Query: 350 DERIIVFTTNHKDRLDPAVLRPGRMDVHIYMS 381
I++ TN D LDPA+LRPGR D I +S
Sbjct: 302 V--ILIAATNRPDILDPALLRPGRFDRQIPVS 331
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 49/177 (27%), Positives = 90/177 (50%)
Query: 208 ATFDTLA-MEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMS 266
+T++ + ++ ++++ I E +E VK + + +G +G LLYGPPGTGK+ L A++
Sbjct: 140 STYEMVGGLDKQIQE-IKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198
Query: 267 N-----YLNFDIYDLELSAVHSNSELRRVLLSTGNR---SILVVEDIDCSLELEDRQAQP 318
+ ++ +L + S + R L SI+ +++ID + + +
Sbjct: 199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID---SIGSARLET 255
Query: 319 TTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
T + +Q T+ LLN LDG ++ + ++ TN D LD A+LRPGR+D
Sbjct: 256 GTGD-----SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDVLDQALLRPGRID 305
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T++ + ++K+ + E ++ V+ D + + G +G L YGPPG GK+ L A++N
Sbjct: 207 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 266
Query: 268 -YLNF-DIYDLELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
NF I EL + SE R + ++ V D EL D A+ N+
Sbjct: 267 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNI 322
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 323 GDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 377
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 53/193 (27%), Positives = 91/193 (47%)
Query: 201 WITFNHPATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSS 260
++T + D A+E +++ +I + V+ D +R +G G LL GPPG GK+
Sbjct: 571 FVTVPNVTWADIGALE-DIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTL 629
Query: 261 LIAAMSNY--LNF-DIYDLELSAVH---SNSELRRVLLSTGNRSILVV--EDIDCSLELE 312
L A++N LNF + EL ++ S +R+V N + V+ +++D
Sbjct: 630 LAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR 689
Query: 313 DRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPG 372
+ +V V+ L L +DGL + + I+ TN D +DPA+LRPG
Sbjct: 690 SDRETGASVRVVNQL----------LTEMDGLETR--QQVFILAATNRPDIIDPAILRPG 737
Query: 373 RMDVHIYMSYCTP 385
R+D +++ P
Sbjct: 738 RLDKTLFVGLPPP 750
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 54/210 (25%), Positives = 96/210 (45%)
Query: 169 RKSKSAQEENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLE 228
RK+++ QE + ++ + AR L + + F D A E+ KM+I
Sbjct: 229 RKTENLQEVDGEIEALLQKKAKARSTELQISN-VKFEDVGGND--ATLKEVCKMLIH--- 282
Query: 229 RFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLELSAVHS--NSE 286
++ + Y+ +G RG LL+GPPG GK+ L A++ L+ I + + S + E
Sbjct: 283 --MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGE 340
Query: 287 LRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWS 346
+ L +++ V + C + +++ A V ++ ++ LL +D L +
Sbjct: 341 SEQKLRELFDQA---VSNAPCIVFIDEIDAITPKREVASKDMERRI-VAQLLTCMDDLNN 396
Query: 347 SCGDERIIVF-TTNHKDRLDPAVLRPGRMD 375
R++V TN D LDPA+ R GR D
Sbjct: 397 VAATARVLVIGATNRPDSLDPALRRAGRFD 426
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 176 EENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKD 235
E N + S Q A+R G ++T + D A+E ++++ + + V+ D
Sbjct: 435 ELNDFIVALSSVQPSAKREG-----FVTVPNVTWADIGALE-DIREELTMAILAPVRNPD 488
Query: 236 YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRR 289
++ +G G LL GPPG GK+ L A++N LNF + EL ++ S +R+
Sbjct: 489 QFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 548
Query: 290 VLLSTGNRSILVV--EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSS 347
V N + V+ +++D + +V V+ L L +DGL
Sbjct: 549 VFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQL----------LTEMDGL--E 596
Query: 348 CGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLA 392
+ I+ TN D +DPA+LRPGR+D +++ P D LA
Sbjct: 597 ARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLA 639
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 218 ELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLE 277
E+ KM+I ++ + Y +G RG LL+GPPG GK+ L A++ L+ I +
Sbjct: 159 EVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 213
Query: 278 LSAVHS--NSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLS 335
+ S + E + L ++ V + C + +++ A V ++ ++
Sbjct: 214 APEIVSGVSGESEQKLRELFEQA---VSNAPCIIFIDEIDAITPKREVASKDMERRI-VA 269
Query: 336 GLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
LL +D L + R++V TN D LDPA+ R GR D I
Sbjct: 270 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREI 313
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/166 (31%), Positives = 79/166 (47%)
Query: 221 KMIIEDLERF-VKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN--YLNF-DIYDL 276
K ++DL ++ V+ D + + G +G L YGPPG GK+ L A++N NF I
Sbjct: 486 KRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 545
Query: 277 ELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTL 334
EL + SE R + ++ V D EL D A+ N+ +
Sbjct: 546 ELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNIGDGGGAADRVI 601
Query: 335 SGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
+ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 602 NQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDI 273
A++K+M+ E ++ ++ +G RG LLYGPPGTGK+ + A++N F I
Sbjct: 214 AQIKEMV----ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 274 YDLELS---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLR 328
E+ A S S LR+ + I+ ++++D ++ T V + +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK----THGEVERRI- 324
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+S LL +DGL I++ TN + +DPA+ R GR D
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFD 364
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 218 ELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDL- 276
E+KK I++ ++ ++ + +G + G LLYGPPGTGK+ L A++ +
Sbjct: 412 EVKKEILDTIQLPLEHPELLS-LGLC-RSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVK 469
Query: 277 --ELSAVH---SNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLRP 329
EL ++ S +R V + I+ +++D R V
Sbjct: 470 GPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGV-------- 521
Query: 330 MQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
M +S LL LDGL SS E ++ TN D LDPA+LRPGR D +Y+
Sbjct: 522 MDRVVSQLLAELDGLHSS--REVFVIGATNRPDLLDPALLRPGRFDKLVYV 570
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 176 EENKTLKLYSLNQDHARRFGLDSWHWITFNHPATFDTLAMEAELKKMIIEDLERFVKRKD 235
E N + S Q A+R G ++T + D A+E ++++ + + V+ D
Sbjct: 552 ELNDFIVALSSVQPSAKREG-----FVTVPNVTWADIGALE-DIREELTMAILAPVRNPD 605
Query: 236 YYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNY--LNF-DIYDLELSAVH---SNSELRR 289
++ +G G LL GPPG GK+ L A++N LNF + EL ++ S +R+
Sbjct: 606 QFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 665
Query: 290 VLLSTGNRSILVV--EDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLSGLLNFLDGLWSS 347
V N + V+ +++D + +V V+ L L +DGL
Sbjct: 666 VFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQL----------LTEMDGL--E 713
Query: 348 CGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYMSYCTPCGFDTLA 392
+ I+ TN D +DPA+LRPGR+D +++ P D LA
Sbjct: 714 ARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLA 756
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 218 ELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLNFDIYDLE 277
E+ KM+I ++ + Y +G RG LL+GPPG GK+ L A++ L+ I +
Sbjct: 276 EVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 330
Query: 278 LSAVHS--NSELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRPMQVTLS 335
+ S + E + L ++ V + C + +++ A V ++ ++
Sbjct: 331 APEIVSGVSGESEQKLRELFEQA---VSNAPCIIFIDEIDAITPKREVASKDMERRI-VA 386
Query: 336 GLLNFLDGLWSSCGDERIIVF-TTNHKDRLDPAVLRPGRMDVHI 378
LL +D L + R++V TN D LDPA+ R GR D I
Sbjct: 387 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREI 430
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 146 (56.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 47/171 (27%), Positives = 87/171 (50%)
Query: 219 LKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSL---IA--AMSNYLNFDI 273
LK+M++ D + D +R+G +G L+YGPPGTGK+ L +A A +N++ +I
Sbjct: 609 LKEMVVWDYQH----SDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKANFIPINI 664
Query: 274 YDL---ELSAVHSN-SELRRVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNVLKPLRP 329
+L E+ SE+ R+ +++ + SI+ +++I L++ + K +
Sbjct: 665 SELIQGEIGESEKTLSEIFRIAINS-SPSIIFIDEIQSIFGLKESSNNSSK----KLISQ 719
Query: 330 MQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
+ + L + DG G+ +I+ TN +DP+ LR GR D +Y+
Sbjct: 720 LLIELDNTIGNNDG-----GNRVMILAATNMPQAIDPSFLRSGRFDKTVYI 765
Score = 40 (19.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 119 KQVTRQVESTQYVSYTGQSTKMQSEIRYFNLTFHKQHKD--KVLNSYFPYI 167
K + R +T S +S+ + + L F K+H D K++N ++
Sbjct: 95 KFIERTTSTTSSTSSPIKSSSSTTTLPTIQLWFLKEHIDILKLVNDQITFV 145
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 204 FNHP-ATFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLI 262
F P +D + E K ++ + L+ ++ + + + G + G LLYGPPGTGK+ L
Sbjct: 647 FTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLA 705
Query: 263 AAMSNYLNFDIYDL---ELSAVH---SNSELRRVLLSTGNRSILVVEDIDCSLELEDRQA 316
A++ L+ + + EL ++ S + +R V N S V+ D EL+
Sbjct: 706 KAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIF-FD---ELDS--I 759
Query: 317 QPTTVNVLKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDV 376
P N M +S LL LD + ++ TN D LDP++LRPGR D
Sbjct: 760 APHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDK 819
Query: 377 HIYM 380
+Y+
Sbjct: 820 LVYL 823
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T++ + ++K+ + E ++ V+ D + + G +G L YGPPG GK+ L A++N
Sbjct: 473 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 268 -YLNF-DIYDLELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
NF I EL + SE R + ++ V D EL D A+ N+
Sbjct: 533 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNI 588
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 589 GDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T++ + ++K+ + E ++ V+ D + + G +G L YGPPG GK+ L A++N
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 268 -YLNF-DIYDLELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
NF I EL + SE R + ++ V D EL D A+ N+
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNI 590
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 591 GDGGGAADRVINQILTEMDGM--SIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDI 273
A++K+M+ E ++ ++ +G RG LLYGPPGTGK+ + A++N F I
Sbjct: 214 AQIKEMV----ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 274 YDLELS---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLR 328
E+ A S S LR+ + I+ ++++D ++ T V + +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK----THGEVERRI- 324
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+S LL +DGL I++ TN + +DPA+ R GR D
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFD 364
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T++ + ++K+ + E ++ V+ D + + G +G L YGPPG GK+ L A++N
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 268 -YLNF-DIYDLELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
NF I EL + SE R + ++ V D EL D A+ N+
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNI 590
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 591 GDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDI 273
A++K+M+ E ++ ++ +G RG LLYGPPGTGK+ + A++N F I
Sbjct: 214 AQIKEMV----ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 274 YDLELS---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLR 328
E+ A S S LR+ + I+ ++++D ++ T V + +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK----THGEVERRI- 324
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+S LL +DGL I++ TN + +DPA+ R GR D
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFD 364
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 209 TFDTLAMEAELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSN- 267
T++ + ++K+ + E ++ V+ D + + G +G L YGPPG GK+ L A++N
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 268 -YLNF-DIYDLELSAV-HSNSELR-RVLLSTGNRSILVVEDIDCSLELEDRQAQPTTVNV 323
NF I EL + SE R + ++ V D EL D A+ N+
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD---EL-DSIAKARGGNI 590
Query: 324 LKPLRPMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMDVHIYM 380
++ +L +DG+ S I+ TN D +DPA+LRPGR+D IY+
Sbjct: 591 GDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 217 AELKKMIIEDLERFVKRKDYYRRVGKAWKRGYLLYGPPGTGKSSLIAAMSNYLN---FDI 273
A++K+M+ E ++ ++ +G RG LLYGPPGTGK+ + A++N F I
Sbjct: 214 AQIKEMV----ELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Query: 274 YDLELS---AVHSNSELRRVLLSTGNRS--ILVVEDIDCSLELEDRQAQPTTVNVLKPLR 328
E+ A S S LR+ + I+ ++++D ++ T V + +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK----THGEVERRI- 324
Query: 329 PMQVTLSGLLNFLDGLWSSCGDERIIVFTTNHKDRLDPAVLRPGRMD 375
+S LL +DGL I++ TN + +DPA+ R GR D
Sbjct: 325 -----VSQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFD 364
WARNING: HSPs involving 194 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 431 0.00086 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 444
No. of states in DFA: 618 (66 KB)
Total size of DFA: 273 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.03u 0.10s 38.13t Elapsed: 00:00:04
Total cpu time: 38.09u 0.11s 38.20t Elapsed: 00:00:04
Start: Tue May 21 00:00:22 2013 End: Tue May 21 00:00:26 2013
WARNINGS ISSUED: 2