BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012848
(455 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55G83|ABKC_DICDI Probable serine/threonine-protein kinase abkC OS=Dictyostelium
discoideum GN=abkC PE=3 SV=1
Length = 689
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 168/273 (61%), Gaps = 14/273 (5%)
Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
+ V + +R L LG++ PS++ P F P +ELW ++L T++ +G +IK+GQW
Sbjct: 151 INLVKIGIRVLELGLILLPSVLTFPCC--FIPGVKELWWQLLLETIQFSGTCWIKFGQWI 208
Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
+TRPDLFP L +K S+LHS+ P HSF +T ++IE +F G+ + ++F F+E P+ASGS+
Sbjct: 209 STRPDLFPDLLIEKFSQLHSQCPSHSFQFTNESIENSFNGKSIKDLFLWFDEEPMASGSV 268
Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
AQVH+A G+ V VKV HP V +I+RDF II S IP +KWL L
Sbjct: 269 AQVHKA---LTMDGK-----VAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMKWLSL 320
Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
ES+ +F MM Q DL EA+HL+RF NF+ +V FPKP+YPLV VLVE++E G
Sbjct: 321 PESILEFGKSMMKQADLELEASHLNRFNSNFKYNSEVIFPKPLYPLVSKEVLVESFEPGS 380
Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
+ ++ + H LA IG A ++M+LV
Sbjct: 381 PIMDFIKKNDHH---NPTLAKIGLSAYMQMMLV 410
>sp|Q9P7M0|YOS3_SCHPO ABC1 family protein C21C3.03, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC21C3.03 PE=3 SV=2
Length = 692
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 151/297 (50%), Gaps = 32/297 (10%)
Query: 184 LLMRALYLGVLFSPSIMMAPFA--------DSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
+L+R+ L ++FSP I+ PF S +WL ++ LE AG FIK G
Sbjct: 154 ILLRSFNLFIIFSPIIITLPFIALISFLHLRSLSSLTVSIWLRFLVTQLERAGATFIKLG 213
Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVAS 294
QWAA+R DLFP CK LS+LHS HS AYT+ I + + + EIF F P+
Sbjct: 214 QWAASRTDLFPPAFCKTLSKLHSHVTPHSLAYTQSVICKTYKVESIEEIFVNFNPIPIGV 273
Query: 295 GSIAQVHRASLR-------------------FRYPGQKVKPIV--VAVKVRHPGVGESIR 333
G+IAQV+ A+++ FR P+ VA+KV HP V + I
Sbjct: 274 GAIAQVYTATIKKAATQQDNSYFTSMLQSIGFRQKNISDAPVTQDVAIKVLHPNVEKYIS 333
Query: 334 RDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
D I+ AK+ +++P++KWL L + V+ F + Q++L EA HL++F NFR +
Sbjct: 334 LDLQILGFFAKLINLVPSMKWLSLPDEVKVFGAMLNQQLNLHYEALHLNQFRLNFRGNRY 393
Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
V FP P +L+E Y G +S ++ G LA+ G +AL +ML+V
Sbjct: 394 VEFPAPYDDYTTNQILLEDYMPGIPLSAFLKHKSG--PFNKLLANTGNNALFQMLIV 448
>sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YPL109C PE=1
SV=2
Length = 657
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 23/268 (8%)
Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
++VE V ++R L + +F P +++ P + FG + + +W ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169
Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
E AGP+FIK GQWA +R D+F LC +L +LHS HS ++T + + +A ++ +
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
FD F P+ GSIAQV+ L +Y K I + A+K+ HP V IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288
Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
I+ A + IP ++WL L V QF++ M Q+DL EA +L RF NF+ V
Sbjct: 289 LKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348
Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYV 423
FPKP PL + V+ E + G + +++
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFL 376
>sp|A1TTA2|UBIB_ACIAC Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax
citrulli (strain AAC00-1) GN=ubiB PE=3 SV=1
Length = 522
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 12/217 (5%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP F+K+GQ +TR DL P D+ +L+ L + P TIERAF R + E+
Sbjct: 57 LERLGPIFVKFGQVLSTRRDLLPPDIANELALLQDRVPPFDPDVAVATIERAFRRPVGEV 116
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
F FE PVAS SIAQVH A +R R+ ++ VAVKV PG+ I D ++ +A
Sbjct: 117 FVSFERVPVASASIAQVHFAIVRDRHGVER----EVAVKVLRPGMLPVIDNDLGLMRAMA 172
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ S+ K L+ + V +F ++ ++DL REAA+ ++ N R V P+ ++
Sbjct: 173 GWVESLSADGKRLKPRQVVAEFDNYLHDELDLIREAANAAQLRRNMERLGLVRIPEILWD 232
Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
HP VLV +G +S+ ERL++A I
Sbjct: 233 FCHPEVLVMERMKGVPISQI-------ERLRAAGVDI 262
>sp|B9ME24|UBIB_ACIET Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax ebreus
(strain TPSY) GN=ubiB PE=3 SV=1
Length = 521
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 30/247 (12%)
Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
FR+ WL V R LE+ GP F+K+GQ +TR DL P D+ +L
Sbjct: 27 FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86
Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
+ L + P TIERAF R + E+F F+ PVAS SIAQVH A +R R +
Sbjct: 87 ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146
Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
VAVKV PG+ I +D ++ + A + S+ K L+ E V +F ++ ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202
Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
DL REAA+ ++ N + V P+ + H VLV +G +++ ERL
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQV-------ERL 255
Query: 433 KSALAHI 439
+SA I
Sbjct: 256 RSAGVDI 262
>sp|A1W4D7|UBIB_ACISJ Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax sp.
(strain JS42) GN=ubiB PE=3 SV=1
Length = 521
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 30/247 (12%)
Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
FR+ WL V R LE+ GP F+K+GQ +TR DL P D+ +L
Sbjct: 27 FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86
Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
+ L + P TIERAF R + E+F F+ PVAS SIAQVH A +R R +
Sbjct: 87 ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146
Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
VAVKV PG+ I +D ++ + A + S+ K L+ E V +F ++ ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202
Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
DL REAA+ ++ N + V P+ + H VLV +G +++ +RL
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQV-------DRL 255
Query: 433 KSALAHI 439
+SA I
Sbjct: 256 RSAGVDI 262
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP FIK+GQ +TRPDL P D +L++L K P +++ IE++ G+ + ++
Sbjct: 58 LESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKL 117
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
+ FE P+AS SIAQVH+A L + G++ VAVKV P + I +D ++ A
Sbjct: 118 YAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169
Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + K L+ E V +F ++ ++DL REAA+ S+ NF+ + PK Y
Sbjct: 170 GWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 229
Query: 403 LVHPAVLVETYEQGECVS 420
VL + G VS
Sbjct: 230 YCTSDVLTIEWMDGTPVS 247
>sp|C5CWY2|UBIB_VARPS Probable ubiquinone biosynthesis protein UbiB OS=Variovorax
paradoxus (strain S110) GN=ubiB PE=3 SV=1
Length = 521
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 129/273 (47%), Gaps = 30/273 (10%)
Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLR------------------TLETA 227
MR Y G+ + + F++ WL VV R LE
Sbjct: 1 MRRFYRGIFIVWVALRYGLDELVLTSFQKPWLRVVARIVSIGRNLDAPRGQRLREALERL 60
Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
GP F+K+GQ +TR DL P D+ +L+ L + P A TIERAF R + ++F F
Sbjct: 61 GPIFVKFGQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQF 120
Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-IS 346
+E P+AS SIAQVH A++R + + VAVKV P + I +D ++ + A +
Sbjct: 121 DETPIASASIAQVHFATIR----TDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVE 176
Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
+ P K L+ E V +F ++ ++DL REAA+ ++ N + V P+ + HP
Sbjct: 177 KLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHP 236
Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
V+V G +++ +RL++A I
Sbjct: 237 EVIVMERMNGVPIAQL-------DRLRAAGVDI 262
>sp|Q7Z695|ADCK2_HUMAN Uncharacterized aarF domain-containing protein kinase 2 OS=Homo
sapiens GN=ADCK2 PE=2 SV=1
Length = 626
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
GS A V RA + P + I VAVKV HPG+ + D +++ + +++ V+P +KW
Sbjct: 285 GSNAGVSRAQVPGHQP-EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKW 343
Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
L L E V++F M+ Q+DL EA +L F NFR K V FP P+ P V VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403
Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
+ VS Y + LK +A +G + LLKM+ V
Sbjct: 404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFV 438
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
P LWLH++L+ ET+GP +IK GQWA+TR DLF C + S+LH + H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183
Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
+ + +AFG I PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217
>sp|A9BP42|UBIB_DELAS Probable ubiquinone biosynthesis protein UbiB OS=Delftia
acidovorans (strain DSM 14801 / SPH-1) GN=ubiB PE=3 SV=1
Length = 521
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP F+K+GQ +TR DL P D+ ++L+ L + P TIERAF ++L +I
Sbjct: 57 LEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQDRVPPFDSQIAVDTIERAFRKKLDQI 116
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F FE PVAS SIAQVH A + R Q+ VAVKV PG+ I +D ++++ A
Sbjct: 117 FVSFEREPVASASIAQVHFAVISDRNGVQR----DVAVKVLRPGMKTVIDKDLALMHMMA 172
Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + + K L+ + V +F ++ ++DL REA++ ++ N V P+ +
Sbjct: 173 RWVERLSADGKRLKPRQVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEVYWD 232
Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
V+V G +S+ ERL+ A I
Sbjct: 233 FCRSDVMVMQRMTGVPISQV-------ERLREAGVDI 262
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE GP F+K+GQ +TR DL P DL +L L K P + + IE + +S
Sbjct: 57 RALEELGPIFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEESLKSPVS 116
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
E+F F+ P+AS SIAQVH A+L+ G++ V VKV PG+ ++IR D ++ L
Sbjct: 117 ELFADFQTYPMASASIAQVHAATLK---NGKE-----VVVKVIRPGIEKTIRLDIALMLL 168
Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
A+ + + K L E V+ + ++ ++DL REAA+ S+ NF + + P+
Sbjct: 169 VARLVENYWEDGKRLHPVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELIYIPEVY 228
Query: 401 YPLVHPAVLV 410
+ + H VLV
Sbjct: 229 WEMTHSRVLV 238
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP FIK+GQ +TRPDL P D +L++L K P +++ IE++ G+ + ++
Sbjct: 58 LESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKL 117
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
+ FE P+AS SIAQVH+A L + G++ VAVKV P + I +D ++ A
Sbjct: 118 YAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFGA 169
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
A + + + L+ E V +F ++ ++DL REAA+ + NF + PK Y
Sbjct: 170 AWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFYD 229
Query: 403 LVHPAVLVETYEQGECVS 420
VL + G V+
Sbjct: 230 YCTSDVLTIEWMDGTPVA 247
>sp|Q63X97|UBIB_BURPS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain K96243) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|A3N5V1|UBIB_BURP6 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 668) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|Q3JVZ2|UBIB_BURP1 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|A3NRJ7|UBIB_BURP0 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|A1V750|UBIB_BURMS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain SAVP1) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|Q62MP2|UBIB_BURMA Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain ATCC 23344) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|A2S8L4|UBIB_BURM9 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|A3MNU1|UBIB_BURM7 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R LE+ GP F+K+GQ +TR DL P D +L++L + P A +E++ G R+
Sbjct: 54 RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
+FD FE PVAS SIAQVH A L+ G+ K VAVKV P + I D ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
+A + + L+ E V +F ++ ++DL REAA+ S+ NF + P+
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229
Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQG 428
+ PAVLV G +S+ VD L+
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRA 256
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP F+K+GQ +TR DL P + +L+ L + P ++ +ER+ GR++ E+
Sbjct: 56 LESLGPIFVKFGQVLSTRRDLLPPEYADELALLQDRVPPFDGDIARQVVERSLGRKVEEL 115
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
F F+ PVAS S+AQVH+A LR G+ + VAVKV PG+ I +D ++ LA
Sbjct: 116 FVDFDLKPVASASVAQVHKAWLRQPDGGRGRE---VAVKVLRPGILPVIEQDLSLMRTLA 172
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + K L+ E V +F ++ ++D+ EAA+ S+ NF+ + P+ Y
Sbjct: 173 GWVEKLFADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYD 232
Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA 435
VL + G V + ERL+ A
Sbjct: 233 YSSREVLTLEWMHGIPVGQI-------ERLREA 258
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
LE GP F+K+GQ +TR DL P D+ +L++L + P ++ + ++ GR + E
Sbjct: 56 ALERLGPIFVKFGQVLSTRRDLIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLGRPIEE 115
Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
+F F+ PVAS SIAQVH L + G++ VAVKV P V I D ++ +A
Sbjct: 116 VFASFDADPVASASIAQVHFGVL---HDGRE-----VAVKVLRPNVLNIIEADLALLRVA 167
Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
A + + P + LR E V +F ++ ++DL REAA+ ++ N + P+ ++
Sbjct: 168 AAWLERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIW 227
Query: 402 PLVHPAVLVETYEQGECVSR 421
L VLV G +S+
Sbjct: 228 DLSSAEVLVMERMHGVPISQ 247
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 14/224 (6%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP F+K+GQ +TR DL P D+ +L++L + P +ER+ G+ LS +
Sbjct: 57 LEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKIAAAIVERSLGKPLSAL 116
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
F F+ PVAS SIAQVH A+LR G VAVKV PG+ I D ++ ++A
Sbjct: 117 FHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDVA 172
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + K L+ E V +F ++ ++DL REAA+ S+ NF + + + P+ +
Sbjct: 173 TWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAKSELLLVPEVFWD 232
Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446
V V G VS + DEL+ A + TH L +
Sbjct: 233 WCTSEVFVMERMHGVRVS-HADELRA--------AGVDTHKLAR 267
>sp|Q6NSR3|ADCK2_MOUSE Uncharacterized aarF domain-containing protein kinase 2 OS=Mus
musculus GN=Adck2 PE=2 SV=1
Length = 617
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
I VAVKV HPG+ + D +++ + +K ++P VKWL L E V++F M+ Q DL
Sbjct: 297 IPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRY 356
Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
EA +L F +NF+ V FP P+ PL+ +LVETYE+ VS Y + LK +
Sbjct: 357 EAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKI 415
Query: 437 AHIGTHALLKMLLV 450
A +G + LLKM+ V
Sbjct: 416 AQLGINMLLKMIFV 429
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
C+ L +RA L F P + + P P LWLH++ + ET+GP +IK GQWA+T
Sbjct: 96 CLRLGLRAGVLLAKFFPLLFLYPLT-YLAPGLSTLWLHLLFKATETSGPTYIKLGQWAST 154
Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
R DLF C + S+LH + H +A T+ +++AFG + PV SG +AQV
Sbjct: 155 RRDLFSEAFCTQFSKLHVQVTPHPWARTEYLLQQAFGEDWGSLLFFETREPVGSGCVAQV 214
Query: 301 HRA 303
++A
Sbjct: 215 YKA 217
>sp|B2SX38|UBIB_BURPP Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1
Length = 525
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP F+K+GQ +TR DL P D+ +L++L + P A + +E A G + +
Sbjct: 56 LESLGPIFVKFGQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDVL 115
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
FD FE PVAS SIAQVH A+++ GQ VAVKV P + I D ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ K L+ E V +F ++ ++DL REAA+ S+ NF + P+ +
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231
Query: 403 LVHPAVLVETYEQGECVSR 421
P VLV G +S+
Sbjct: 232 FCTPTVLVMERMVGVPISQ 250
>sp|Q145N7|UBIB_BURXL Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
xenovorans (strain LB400) GN=ubiB PE=3 SV=1
Length = 525
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP F+K+GQ +TR DL P D+ +L++L + P A +E++ G + +
Sbjct: 56 LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVL 115
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
FD FE PVAS SIAQVH A+++ GQ VAVKV P + I D ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ K L+ E V +F ++ ++DL REAA+ S+ NF + P+ +
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231
Query: 403 LVHPAVLVETYEQGECVSR 421
P VLV G +S+
Sbjct: 232 FCTPTVLVMERMVGVPISQ 250
>sp|B2JCV1|UBIB_BURP8 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1
Length = 527
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE+ GP F+K+GQ +TR DL D+ +L++L + P A IE++ G + I
Sbjct: 56 LESLGPIFVKFGQVLSTRRDLLRPDIATELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTI 115
Query: 284 FDGFEEAPVASGSIAQVHRASLRF-RYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
FD FE PVAS SIAQVH A+L+ ++ G++ VAVKV P + I D ++ ++
Sbjct: 116 FDDFERVPVASASIAQVHFATLKIGQHAGKQ-----VAVKVLRPNMLPVIDSDLALLRDI 170
Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
A + K L+ E V +F ++ ++DL REAA+ S+ NF + P+ +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYW 230
Query: 402 PLVHPAVLVETYEQGECVSRYVDELQ 427
VLV G +S+ VD L+
Sbjct: 231 EYCTANVLVMERMVGVPISQ-VDTLR 255
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P + K IE G+++SE+
Sbjct: 63 LQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKKISEV 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ I +D F++
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFILA 174
Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
A K+S+ + L + V + + ++DL REAA+ S+ NF + P+
Sbjct: 175 RAAEKVSA---DARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQV 231
Query: 400 VYPLVHPAVLV 410
+ P VLV
Sbjct: 232 YWDWCRPKVLV 242
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP FIK+GQ +TR DL P D+ +L+ L + P IER G +S++
Sbjct: 63 LEDLGPIFIKFGQLLSTRRDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQL 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ IR+D + L A
Sbjct: 123 FARFDSQPLASASVAQVHAAQLK---SGEE-----VVVKVVRPGLKPVIRQDLAWLFLLA 174
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+I+ A + LR E V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 175 RIAERASADARRLRPVEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYWD 234
Query: 403 LVHPAVLV 410
L VLV
Sbjct: 235 LCRHQVLV 242
>sp|Q4ZZG5|UBIB_PSEU2 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=ubiB PE=3 SV=1
Length = 539
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P K IE G R+ ++
Sbjct: 63 LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQLAIKLIEEQLGARICDV 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+E P+AS S+AQVH A L+ G++ V VKV PG+ I +D + + A
Sbjct: 123 FSRFDEKPLASASVAQVHAACLK---TGEE-----VVVKVVRPGLKPIIGQDLAWLFILA 174
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+++ + A + L + V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 175 RMAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANASQLRRNFEGSDLLYVPQVYWD 234
Query: 403 LVHPAVLV 410
P VLV
Sbjct: 235 WCRPKVLV 242
>sp|Q87UZ0|UBIB_PSESM Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=ubiB PE=3 SV=1
Length = 539
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P K IE G R+ ++
Sbjct: 63 LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQVAIKLIEEQLGARICDV 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+E P+AS S+AQVH A L+ G++ V VKV PG+ I +D + + A
Sbjct: 123 FSRFDETPLASASVAQVHAACLK---TGEE-----VVVKVVRPGLKPIIGQDLAWLFILA 174
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+++ + A + L + V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 175 RMAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWD 234
Query: 403 LVHPAVLV 410
P VLV
Sbjct: 235 WCRPKVLV 242
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
R GP F+K GQ +TRPDL P D ++L+EL P A IER L
Sbjct: 152 RIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLE 211
Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
IF P+A+ S+ QV++A L RY GQ VVAVKV+ PG+ E+I DF +I
Sbjct: 212 TIFSSVSPEPIAAASLGQVYKAQL--RYSGQ-----VVAVKVQRPGIEEAIGLDFYLIRG 264
Query: 342 AAKISSVIPAVKWLRLD--ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
K+ + V ++ D + +FA + +++ +EA + RF + DV P
Sbjct: 265 VGKL--INKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDI 322
Query: 400 VYPLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLL 449
+ VL + +G ++ + E QG + L L + G L+ LL
Sbjct: 323 FWDYTSRKVLTMEWVEGTKLNEQLAIESQGLKVLD--LVNTGIQCSLRQLL 371
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP F+K+GQ +TR DL P D+ + L +L + P + IE++ G +SE+
Sbjct: 59 LEELGPVFVKFGQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLGAPVSEL 118
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
F F P+AS S+AQVH A+L GQK V VKV PG+ + IR+D ++ L A
Sbjct: 119 FAEFSPDPMASASVAQVHAATLPN---GQK-----VVVKVLRPGIEKVIRQDLGLMYLMA 170
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
+ K L E V + + ++DL REAA+ S+ NF
Sbjct: 171 GLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNF 216
>sp|Q02EV2|UBIB_PSEAB Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=ubiB PE=3 SV=1
Length = 533
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L+ L K P K IE G ++ ++
Sbjct: 64 LQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
F FE P+AS S+AQVH A L+ G++ V VKV P + IR D F++
Sbjct: 124 FARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFILA 175
Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
LA ++SS + L E V + ++ ++DL REAA+ S+ NF + P+
Sbjct: 176 RLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQV 232
Query: 400 VYPLVHPAVLV 410
+ P VLV
Sbjct: 233 YWDWCRPKVLV 243
>sp|Q9HUB8|UBIB_PSEAE Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=ubiB PE=3 SV=1
Length = 533
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L+ L K P K IE G ++ ++
Sbjct: 64 LQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
F FE P+AS S+AQVH A L+ G++ V VKV P + IR D F++
Sbjct: 124 FARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFILA 175
Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
LA ++SS + L E V + ++ ++DL REAA+ S+ NF + P+
Sbjct: 176 RLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQV 232
Query: 400 VYPLVHPAVLV 410
+ P VLV
Sbjct: 233 YWDWCRPKVLV 243
>sp|B7V3F8|UBIB_PSEA8 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain LESB58) GN=ubiB PE=3 SV=1
Length = 533
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L+ L K P K IE G ++ ++
Sbjct: 64 LQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
F FE P+AS S+AQVH A L+ G++ V VKV P + IR D F++
Sbjct: 124 FARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFILA 175
Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
LA ++SS + L E V + ++ ++DL REAA+ S+ NF + P+
Sbjct: 176 RLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQV 232
Query: 400 VYPLVHPAVLV 410
+ P VLV
Sbjct: 233 YWDWCRPKVLV 243
>sp|A6VDI8|UBIB_PSEA7 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain PA7) GN=ubiB PE=3 SV=1
Length = 533
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L+ L K P K IE G ++ ++
Sbjct: 64 LQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
F FE P+AS S+AQVH A L+ G++ V VKV P + IR D F++
Sbjct: 124 FARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFILA 175
Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
LA ++SS + L E V + ++ ++DL REAA+ S+ NF + P+
Sbjct: 176 RLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQV 232
Query: 400 VYPLVHPAVLV 410
+ P VLV
Sbjct: 233 YWDWCRPKVLV 243
>sp|C1DHS4|UBIB_AZOVD Probable ubiquinone biosynthesis protein UbiB OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1
Length = 537
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L+ L + P + + IE G R+ E
Sbjct: 64 LQDLGPIFIKFGQILSTRRDLLPEDIADELTWLQDRVPPFNPQQSVALIEEQLGARVDEA 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ IR+D + L A
Sbjct: 124 FARFDSEPLASASVAQVHAAQLK---TGEE-----VVVKVVRPGLKAVIRQDLAWLYLFA 175
Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+++ + L L + V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 176 RLAERASTEARRLHLVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWD 235
Query: 403 LVHPAVLV 410
P VLV
Sbjct: 236 WCRPKVLV 243
>sp|Q48PJ6|UBIB_PSE14 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=ubiB PE=3 SV=1
Length = 539
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P IE G R+ ++
Sbjct: 63 LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQVAINLIEEQLGARICDV 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+E P+AS S+AQVH A L+ G++ V VKV PG+ I +D + + A
Sbjct: 123 FSRFDETPLASASVAQVHAACLK---TGEE-----VVVKVVRPGLKPVIGQDLAWLFILA 174
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+++ + A + L + V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 175 RMAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWD 234
Query: 403 LVHPAVLV 410
P VLV
Sbjct: 235 WCRPKVLV 242
>sp|C4L962|UBIB_TOLAT Probable ubiquinone biosynthesis protein UbiB OS=Tolumonas auensis
(strain DSM 9187 / TA4) GN=ubiB PE=3 SV=1
Length = 543
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
E GP FIK+GQ +TR DL P DL ++L+ L + P ++ IE+A G+ + +F
Sbjct: 62 EGLGPVFIKFGQMLSTRRDLLPPDLAEELAMLQDRVPSFDGQLAREQIEQALGQPIEALF 121
Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
F++ P+AS S+AQVH A L K + +KV P + I D ++ L AK
Sbjct: 122 ADFDQQPLASASVAQVHTARL-------KENNAEIVIKVIRPDIKPVINDDIRLMRLCAK 174
Query: 345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
I + + LR E ++++ ++ +++L EAA+ + NF
Sbjct: 175 IVAFLIPNNRLRPVEVIEEYRRTLLDELNLMSEAANAIQLRRNF 218
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P + K IE G+++SE+
Sbjct: 63 LQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMKLIEEQLGKKISEV 122
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ I +D + + A
Sbjct: 123 FSRFDVDPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIGQDLAWLFILA 174
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + A + L + V + + ++DL REAA+ S+ NF + P+ +
Sbjct: 175 RAAERFSADARLLHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWD 234
Query: 403 LVHPAVLV 410
P VLV
Sbjct: 235 WCRPKVLV 242
>sp|Q7VN62|UBIB_HAEDU Probable ubiquinone biosynthesis protein UbiB OS=Haemophilus
ducreyi (strain 35000HP / ATCC 700724) GN=ubiB PE=3 SV=1
Length = 542
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP +IK GQ ATR DLF L +L+ L +K IE+A G L
Sbjct: 61 LQELGPVWIKLGQMLATRRDLFEPALADQLALLQDSVAPFDGKLARKIIEQALGNTLETW 120
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
FD F+E +AS SIAQVH A+ P GQ V +KV P + I+ D ++
Sbjct: 121 FDDFDEQALASASIAQVHTATFNKNQPLAGQN-----VVLKVIRPDIEHIIKADIALMYQ 175
Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
LA I + K LR E V+++ ++ ++DL RE A+ R NF + + P
Sbjct: 176 LAKLIPYLSDDAKRLRATEVVREYEKTLLDELDLTREMANAIRLRNNFENSEMLYVPAMY 235
Query: 401 YPLVHPAVLV 410
H V+V
Sbjct: 236 PDFCHKNVIV 245
>sp|A0KEF8|UBIB_AERHH Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=ubiB PE=3 SV=1
Length = 546
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
E GP FIK+GQ +TR DL P D+ ++L+ L + P ++ IE + G + +F
Sbjct: 62 EALGPIFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARRQIEASLGCTIETLF 121
Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LAA 343
D F+E P+AS SIAQVH A R + G++ + +KV P + I D ++ LA
Sbjct: 122 DDFDETPLASASIAQVHTA--RLKENGRE-----IVIKVIRPDIEPVIEADLRLMQALAR 174
Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
++ +P LR E V+++ ++ +++L REAA+ + NF
Sbjct: 175 LVARFVPQSGRLRPIEVVEEYRKTILDELNLMREAANAIQLRRNF 219
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P + IE G ++ E+
Sbjct: 64 LQDLGPIFIKFGQLLSTRRDLLPTDIADELMLLQDRVPPFDPQHAVALIEEQLGAKVGEV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ I +D + L A
Sbjct: 124 FSRFDVEPLASASVAQVHAARLK---SGEE-----VVVKVVRPGLKPVIAQDLAWLFLIA 175
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
K + A + L E V + + ++DL REAA+ S+ NF + + P+ +
Sbjct: 176 KAAERASADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWD 235
Query: 403 LVHPAVLV 410
L P VLV
Sbjct: 236 LCRPKVLV 243
>sp|Q2NWT9|UBIB_SODGM Probable ubiquinone biosynthesis protein UbiB OS=Sodalis
glossinidius (strain morsitans) GN=ubiB PE=3 SV=1
Length = 544
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 10/180 (5%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP +IK+GQ +TR DLFP + +L+ L + A + IER+ G+ L
Sbjct: 61 LQELGPVWIKFGQMLSTRRDLFPPAIADQLAMLQDRVQPFDGALARAHIERSMGQPLETW 120
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
FD F++ P+AS SIAQVH A L+ GQ+ V +KV P + I+ D ++ LA
Sbjct: 121 FDDFQQEPLASASIAQVHTARLK---NGQE-----VVIKVIRPDILPMIKADMRLMYRLA 172
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
+ + ++P + LR E V ++ ++ +++L REAA+ + NF + P+ VYP
Sbjct: 173 SWVPHLLPDGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNFDGSPMLYIPE-VYP 231
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
+ L + GP FIK GQ +TR DLFP + ++LS+L + P S+ IE G+
Sbjct: 88 IRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKP 147
Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
+++++ F+ P+A+ S+ QVH+A L + G+ V VKV+ PG+ + D I+
Sbjct: 148 IAKLYRSFDPVPLAAASLGQVHKAQL---HTGED-----VVVKVQRPGLKKLFTIDLAIL 199
Query: 340 NLAAKISSVIPAVKWLR---LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
A+ P KW R + ++ + + D RE F NFR V
Sbjct: 200 KKIAQYFQNHP--KWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKV 257
Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
P+ + +L Y G +S Y D L+ + LA +G A L LL
Sbjct: 258 PRVYWRYTSTQILTLEYLPGIKISHY-DALEAAGLERKELAQLGARAYLFQLL 309
>sp|Q491V8|UBIB_BLOPB Probable ubiquinone biosynthesis protein UbiB OS=Blochmannia
pennsylvanicus (strain BPEN) GN=ubiB PE=3 SV=1
Length = 546
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP +IK+GQ +TR D+FP + +LS L + K IERA G L
Sbjct: 61 LQELGPIWIKFGQMLSTRRDIFPDSVADQLSILQDRVAPFDGIIAKMCIERAIGNSLETW 120
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
F F+E P+AS SI+QVH A L+ + K IV +K+ PG+ I+ D ++ LA
Sbjct: 121 FKDFQEIPLASASISQVHSARLK-----KNNKDIV--IKIIRPGLLPVIKIDICLMYRLA 173
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
I +P + + E V ++ + ++++L +E A+ + NF++ + + PK
Sbjct: 174 KWICKFLPEGRKFKFSEVVSEYEKTLFNELNLLKETANTIQLRRNFKKSQILYIPKVYVD 233
Query: 403 LVHPAVLV 410
V+V
Sbjct: 234 FCSENVMV 241
>sp|B2VG47|UBIB_ERWT9 Probable ubiquinone biosynthesis protein UbiB OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=ubiB PE=3
SV=1
Length = 545
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
LE GP +IK+GQ +TR DLFP + +L+ L K A KK IE + G +
Sbjct: 61 LEQLGPVWIKFGQMMSTRRDLFPPHIADQLAMLQDKVAPFDGAQAKKLIEHSLGAPVESQ 120
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
FD F+ P+AS SIAQVH A+L+ G++ V +KV P + I+ D +I LA
Sbjct: 121 FDDFDIVPLASASIAQVHTATLKEN--GRE-----VVIKVIRPDILPVIKADMKLIYRLA 173
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
+ ++P + LR E V + ++ +++L REAA+ + NF
Sbjct: 174 RWVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNF 219
>sp|A8G8C0|UBIB_SERP5 Probable ubiquinone biosynthesis protein UbiB OS=Serratia
proteamaculans (strain 568) GN=ubiB PE=3 SV=1
Length = 543
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP +IK+GQ +TR DLFP + +L+ L + A +K IE A G L
Sbjct: 61 LQELGPVWIKFGQMMSTRRDLFPPQIADQLTLLQDRVAPFDGALARKHIELAMGGPLETW 120
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
FD F++ +AS SIAQVH A R + GQ+ V +KV P + I+ D ++ LA
Sbjct: 121 FDDFDQQALASASIAQVHTA--RLKTTGQE-----VVLKVIRPDIRPIIKADVRLMYRLA 173
Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
A + ++P + LR E V+++ ++ +++L REAA+ + NF
Sbjct: 174 AWVPKLMPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNF 219
>sp|A5WA47|UBIB_PSEP1 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1
Length = 540
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
L+ GP FIK+GQ +TR DL P D+ +L L + P IE G ++ E+
Sbjct: 64 LQDLGPIFIKFGQLLSTRRDLLPPDIADELMLLQDRVPPFDPKKAVALIEEQLGAKVGEV 123
Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
F F+ P+AS S+AQVH A L+ G++ V VKV PG+ I +D + L A
Sbjct: 124 FSRFDVEPLASASVAQVHAARLK---TGEE-----VVVKVVRPGLKPVIAQDLAWLFLIA 175
Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
K + A + L E V + + ++DL REAA+ S+ NF + + P+ +
Sbjct: 176 KAAERASADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEDSELMYVPQVYWD 235
Query: 403 LVHPAVLV 410
L P VLV
Sbjct: 236 LCRPKVLV 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,989,623
Number of Sequences: 539616
Number of extensions: 6286978
Number of successful extensions: 18853
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 18420
Number of HSP's gapped (non-prelim): 210
length of query: 455
length of database: 191,569,459
effective HSP length: 121
effective length of query: 334
effective length of database: 126,275,923
effective search space: 42176158282
effective search space used: 42176158282
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)