Query 012848
Match_columns 455
No_of_seqs 254 out of 1277
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 06:56:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 4.8E-67 1E-71 557.3 27.9 236 211-455 52-288 (517)
2 KOG1235 Predicted unusual prot 100.0 1.7E-61 3.7E-66 514.6 20.2 227 217-455 94-324 (538)
3 KOG1236 Predicted unusual prot 100.0 2.8E-60 6E-65 485.9 16.1 272 182-455 88-368 (565)
4 PRK04750 ubiB putative ubiquin 100.0 2.3E-58 5.1E-63 493.1 24.6 231 217-455 52-283 (537)
5 TIGR01982 UbiB 2-polyprenylphe 100.0 4.9E-56 1.1E-60 465.7 24.8 230 217-455 50-280 (437)
6 PF03109 ABC1: ABC1 family; I 100.0 1.8E-35 3.9E-40 259.8 7.9 119 274-400 1-119 (119)
7 KOG1234 ABC (ATP binding casse 100.0 5.7E-33 1.2E-37 273.2 9.1 201 242-455 7-207 (363)
8 cd05145 RIO1_like RIO kinase f 99.0 2.4E-09 5.2E-14 99.9 11.0 138 290-455 3-141 (190)
9 cd05147 RIO1_euk RIO kinase fa 98.8 6.2E-08 1.3E-12 91.2 11.5 136 290-455 3-141 (190)
10 cd05119 RIO RIO kinase family, 98.4 2.6E-06 5.6E-11 77.9 10.9 131 290-455 3-138 (187)
11 smart00090 RIO RIO-like kinase 98.2 7E-06 1.5E-10 80.1 10.6 133 290-455 34-172 (237)
12 PF01163 RIO1: RIO1 family; I 98.1 1.2E-05 2.6E-10 76.5 8.2 127 300-455 2-130 (188)
13 cd05144 RIO2_C RIO kinase fami 97.9 6.7E-05 1.4E-09 70.1 9.8 127 289-455 20-148 (198)
14 PRK14879 serine/threonine prot 97.9 8.2E-05 1.8E-09 69.3 10.3 117 290-455 2-118 (211)
15 cd05151 ChoK Choline Kinase (C 97.7 0.00018 4E-09 64.3 8.6 78 289-421 3-80 (170)
16 COG1718 RIO1 Serine/threonine 97.7 0.00049 1.1E-08 68.6 11.7 134 291-455 55-190 (268)
17 TIGR03724 arch_bud32 Kae1-asso 97.3 0.0011 2.5E-08 61.2 8.8 112 292-455 2-113 (199)
18 cd00180 PKc Catalytic domain o 97.2 0.0015 3.2E-08 57.8 8.6 111 292-455 1-115 (215)
19 PRK10359 lipopolysaccharide co 97.2 0.0016 3.5E-08 64.1 9.1 115 289-455 36-158 (232)
20 cd05146 RIO3_euk RIO kinase fa 97.1 0.005 1.1E-07 59.2 11.0 140 291-455 4-148 (197)
21 PRK10593 hypothetical protein; 97.0 0.0038 8.2E-08 63.0 10.2 96 266-421 2-102 (297)
22 cd05085 PTKc_Fer Catalytic dom 96.7 0.0074 1.6E-07 56.8 8.5 84 290-424 1-84 (250)
23 cd06657 STKc_PAK4 Catalytic do 96.5 0.0073 1.6E-07 59.4 7.5 45 273-324 2-53 (292)
24 cd05154 ACAD10_11_like Acyl-Co 96.4 0.014 3.1E-07 53.9 8.4 85 288-423 2-91 (223)
25 cd06917 STKc_NAK1_like Catalyt 96.3 0.024 5.1E-07 54.4 9.8 31 290-327 7-37 (277)
26 smart00221 STYKc Protein kinas 96.2 0.028 6.1E-07 51.2 9.1 85 289-425 4-90 (225)
27 cd05120 APH_ChoK_like Aminogly 96.2 0.033 7.1E-07 47.1 9.0 79 289-422 3-83 (155)
28 cd06629 STKc_MAPKKK_Bck1_like 96.0 0.052 1.1E-06 51.8 10.1 36 284-326 1-36 (272)
29 PF06176 WaaY: Lipopolysacchar 95.9 0.013 2.9E-07 57.6 5.8 54 394-455 105-158 (229)
30 cd06642 STKc_STK25-YSK1 Cataly 95.9 0.04 8.6E-07 53.0 8.8 38 280-326 2-39 (277)
31 KOG0595 Serine/threonine-prote 95.7 0.035 7.6E-07 58.6 8.0 24 292-322 18-41 (429)
32 cd05609 STKc_MAST Catalytic do 95.7 0.044 9.6E-07 53.8 8.4 116 289-455 6-124 (305)
33 cd05084 PTKc_Fes Catalytic dom 95.6 0.11 2.3E-06 49.1 10.4 31 290-327 1-31 (252)
34 COG0478 RIO-like serine/threon 95.6 0.11 2.4E-06 52.9 10.7 132 286-455 94-225 (304)
35 cd05096 PTKc_DDR1 Catalytic do 95.6 0.072 1.6E-06 52.1 9.4 40 289-328 10-58 (304)
36 PRK09605 bifunctional UGMP fam 95.5 0.062 1.4E-06 58.4 9.6 116 287-455 336-451 (535)
37 cd07878 STKc_p38beta_MAPK11 Ca 95.5 0.052 1.1E-06 54.3 8.1 48 273-327 3-51 (343)
38 KOG0192 Tyrosine kinase specif 95.4 0.073 1.6E-06 55.7 9.1 79 292-425 49-133 (362)
39 COG3642 Mn2+-dependent serine/ 95.3 0.13 2.8E-06 49.8 9.8 46 375-425 47-92 (204)
40 cd06641 STKc_MST3 Catalytic do 95.3 0.07 1.5E-06 51.4 8.3 36 280-324 2-37 (277)
41 PLN00034 mitogen-activated pro 95.3 0.097 2.1E-06 52.9 9.5 31 290-327 80-110 (353)
42 cd06640 STKc_MST4 Catalytic do 95.2 0.098 2.1E-06 50.4 8.9 36 281-325 3-38 (277)
43 cd05581 STKc_PDK1 Catalytic do 95.2 0.066 1.4E-06 50.9 7.6 31 289-326 6-36 (280)
44 cd05600 STKc_Sid2p_Dbf2p Catal 95.2 0.1 2.2E-06 52.0 9.2 31 289-326 6-36 (333)
45 cd05112 PTKc_Itk Catalytic dom 95.2 0.11 2.3E-06 49.1 8.8 31 289-327 9-39 (256)
46 cd06606 STKc_MAPKKK Catalytic 95.1 0.21 4.4E-06 46.4 10.4 33 289-328 5-37 (260)
47 cd06632 STKc_MEKK1_plant Catal 95.0 0.085 1.8E-06 49.5 7.5 32 289-327 5-36 (258)
48 smart00219 TyrKc Tyrosine kina 95.0 0.14 3E-06 48.0 8.8 36 290-328 5-40 (258)
49 cd00192 PTKc Catalytic domain 94.9 0.18 3.9E-06 47.1 9.5 35 290-328 1-35 (262)
50 cd05122 PKc_STE Catalytic doma 94.9 0.15 3.2E-06 47.1 8.8 34 289-329 5-38 (253)
51 cd06635 STKc_TAO1 Catalytic do 94.9 0.35 7.6E-06 47.9 11.9 48 270-326 13-60 (317)
52 cd05064 PTKc_EphR_A10 Catalyti 94.8 0.14 3.1E-06 49.0 8.8 36 289-328 10-45 (266)
53 cd07880 STKc_p38gamma_MAPK12 C 94.8 0.11 2.3E-06 52.4 8.2 48 272-326 2-50 (343)
54 cd06625 STKc_MEKK3_like Cataly 94.8 0.2 4.3E-06 47.3 9.5 32 289-327 7-38 (263)
55 cd06610 STKc_OSR1_SPAK Catalyt 94.6 0.23 5.1E-06 46.8 9.5 30 289-325 6-35 (267)
56 PRK09550 mtnK methylthioribose 94.6 0.35 7.5E-06 51.4 11.5 113 262-420 6-119 (401)
57 cd05626 STKc_LATS2 Catalytic d 94.3 0.21 4.5E-06 51.2 9.0 29 290-325 7-35 (381)
58 cd06637 STKc_TNIK Catalytic do 94.3 0.22 4.8E-06 47.4 8.6 38 279-325 3-40 (272)
59 cd06627 STKc_Cdc7_like Catalyt 94.2 0.35 7.7E-06 45.1 9.8 32 289-327 5-36 (254)
60 cd05611 STKc_Rim15_like Cataly 94.2 0.4 8.7E-06 45.4 10.3 29 290-325 2-30 (260)
61 cd06646 STKc_MAP4K5 Catalytic 94.2 0.26 5.6E-06 46.9 9.0 32 289-327 14-45 (267)
62 smart00220 S_TKc Serine/Threon 94.2 0.19 4.2E-06 45.8 7.8 27 296-329 1-27 (244)
63 cd06628 STKc_MAPKKK_Byr2_like 94.2 0.64 1.4E-05 44.1 11.5 32 289-327 5-36 (267)
64 PF03881 Fructosamin_kin: Fruc 94.1 0.21 4.5E-06 50.7 8.5 94 265-417 2-97 (288)
65 cd05061 PTKc_InsR Catalytic do 94.1 0.52 1.1E-05 45.7 11.0 91 289-425 11-102 (288)
66 cd06649 PKc_MEK2 Catalytic dom 94.1 0.23 5.1E-06 49.6 8.7 32 290-328 11-42 (331)
67 cd05087 PTKc_Aatyk1_Aatyk3 Cat 94.0 0.53 1.1E-05 45.0 10.7 84 291-424 2-87 (269)
68 cd05070 PTKc_Fyn_Yrk Catalytic 94.0 0.31 6.6E-06 46.3 9.0 111 290-455 12-125 (260)
69 cd05579 STKc_MAST_like Catalyt 94.0 0.34 7.4E-06 45.4 9.2 29 292-327 1-29 (265)
70 cd05591 STKc_nPKC_epsilon Cata 93.9 0.37 8E-06 47.9 9.8 30 291-327 2-31 (321)
71 cd06608 STKc_myosinIII_like Ca 93.9 0.33 7.2E-06 45.8 8.9 32 289-327 11-42 (275)
72 cd06650 PKc_MEK1 Catalytic dom 93.8 0.3 6.6E-06 49.0 9.0 33 289-328 10-42 (333)
73 PRK09188 serine/threonine prot 93.7 0.48 1E-05 49.7 10.5 84 289-420 23-106 (365)
74 cd06614 STKc_PAK Catalytic dom 93.7 0.4 8.6E-06 46.3 9.3 31 290-327 25-55 (286)
75 cd06631 STKc_YSK4 Catalytic do 93.5 0.62 1.3E-05 44.3 10.1 31 289-327 5-35 (265)
76 cd06636 STKc_MAP4K4_6 Catalyti 93.5 0.17 3.7E-06 48.7 6.3 29 290-325 22-50 (282)
77 cd05590 STKc_nPKC_eta Catalyti 93.5 0.41 8.9E-06 47.7 9.2 30 291-327 2-31 (320)
78 cd05034 PTKc_Src_like Catalyti 93.5 0.47 1E-05 44.8 9.2 31 289-327 11-41 (261)
79 cd05573 STKc_ROCK_NDR_like Cat 93.4 0.22 4.7E-06 49.7 7.2 30 290-326 7-36 (350)
80 cd05598 STKc_LATS Catalytic do 93.4 0.33 7.2E-06 49.4 8.6 30 289-325 6-35 (376)
81 cd05627 STKc_NDR2 Catalytic do 93.4 0.26 5.7E-06 49.9 7.7 31 289-326 6-36 (360)
82 cd06611 STKc_SLK_like Catalyti 93.4 0.39 8.4E-06 46.1 8.6 31 290-327 11-41 (280)
83 cd05033 PTKc_EphR Catalytic do 93.3 0.66 1.4E-05 44.2 10.0 36 289-328 9-44 (266)
84 cd05049 PTKc_Trk Catalytic dom 93.3 0.65 1.4E-05 44.4 9.9 91 289-425 10-101 (280)
85 cd05041 PTKc_Fes_like Catalyti 93.3 0.5 1.1E-05 44.4 9.0 30 290-327 1-30 (251)
86 cd05072 PTKc_Lyn Catalytic dom 93.1 0.62 1.3E-05 44.1 9.5 31 289-327 11-41 (261)
87 PTZ00263 protein kinase A cata 93.1 0.41 8.8E-06 48.0 8.6 31 289-326 23-53 (329)
88 cd05584 STKc_p70S6K Catalytic 93.1 0.58 1.3E-05 46.7 9.6 32 290-325 2-33 (323)
89 cd07836 STKc_Pho85 Catalytic d 93.1 0.8 1.7E-05 43.9 10.3 32 289-327 5-36 (284)
90 cd05067 PTKc_Lck_Blk Catalytic 93.1 0.78 1.7E-05 43.5 10.0 30 290-327 12-41 (260)
91 cd06620 PKc_MAPKK_Byr1_like Ca 93.1 0.64 1.4E-05 44.9 9.6 31 290-327 11-41 (284)
92 PLN02756 S-methyl-5-thioribose 93.0 0.94 2E-05 48.5 11.5 107 260-416 6-119 (418)
93 cd08529 STKc_FA2-like Catalyti 93.0 0.61 1.3E-05 43.7 9.2 30 289-325 5-34 (256)
94 cd05592 STKc_nPKC_theta_delta 93.0 0.47 1E-05 47.3 8.8 30 291-327 2-31 (316)
95 cd05115 PTKc_Zap-70 Catalytic 93.0 0.78 1.7E-05 43.8 10.0 32 292-328 3-34 (257)
96 cd05069 PTKc_Yes Catalytic dom 93.0 0.72 1.6E-05 43.8 9.7 30 290-327 12-41 (260)
97 cd06623 PKc_MAPKK_plant_like C 92.9 0.94 2E-05 42.6 10.3 33 289-328 6-38 (264)
98 cd05040 PTKc_Ack_like Catalyti 92.8 0.82 1.8E-05 43.1 9.7 36 290-329 1-36 (257)
99 cd06630 STKc_MEKK1 Catalytic d 92.8 1.3 2.9E-05 41.8 11.1 32 289-327 5-36 (268)
100 cd05625 STKc_LATS1 Catalytic d 92.8 0.43 9.3E-06 48.7 8.3 30 289-325 6-35 (382)
101 cd05114 PTKc_Tec_Rlk Catalytic 92.7 0.63 1.4E-05 44.0 8.9 30 290-327 10-39 (256)
102 cd05063 PTKc_EphR_A2 Catalytic 92.7 0.98 2.1E-05 42.9 10.2 36 289-328 10-45 (268)
103 cd05123 STKc_AGC Catalytic dom 92.5 0.53 1.2E-05 44.0 7.9 29 292-327 1-29 (250)
104 cd05593 STKc_PKB_gamma Catalyt 92.4 0.49 1.1E-05 47.4 8.0 29 291-326 2-30 (328)
105 cd05044 PTKc_c-ros Catalytic d 92.4 0.8 1.7E-05 43.5 9.1 37 290-327 1-37 (269)
106 cd05612 STKc_PRKX_like Catalyt 92.3 0.41 8.9E-06 46.8 7.2 31 289-326 6-36 (291)
107 cd05605 STKc_GRK4_like Catalyt 92.3 0.75 1.6E-05 44.7 8.9 30 290-326 6-35 (285)
108 cd06626 STKc_MEKK4 Catalytic d 92.2 1.2 2.6E-05 41.9 10.0 33 289-328 5-37 (264)
109 cd05597 STKc_DMPK_like Catalyt 92.2 0.63 1.4E-05 46.6 8.6 30 289-325 6-35 (331)
110 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 92.2 1.3 2.9E-05 42.5 10.5 36 289-327 9-44 (284)
111 cd05571 STKc_PKB Catalytic dom 92.2 0.64 1.4E-05 46.3 8.5 29 291-326 2-30 (323)
112 cd05068 PTKc_Frk_like Catalyti 92.1 0.56 1.2E-05 44.5 7.7 31 289-327 11-41 (261)
113 cd05594 STKc_PKB_alpha Catalyt 92.1 0.41 9E-06 47.6 7.1 29 291-326 2-30 (325)
114 KOG0587 Traf2- and Nck-interac 92.1 0.22 4.7E-06 57.2 5.4 123 278-451 15-140 (953)
115 cd05617 STKc_aPKC_zeta Catalyt 92.0 1.1 2.3E-05 44.9 9.9 31 290-327 1-31 (327)
116 PF00069 Pkinase: Protein kina 92.0 0.47 1E-05 44.5 6.9 115 290-455 5-121 (260)
117 cd06605 PKc_MAPKK Catalytic do 92.0 0.76 1.7E-05 43.4 8.4 33 289-328 6-38 (265)
118 cd05589 STKc_PKN Catalytic dom 92.0 0.54 1.2E-05 46.8 7.7 31 290-327 5-35 (324)
119 cd06609 STKc_MST3_like Catalyt 91.9 0.95 2.1E-05 43.3 9.1 28 290-324 7-34 (274)
120 cd05077 PTK_Jak1_rpt1 Pseudoki 91.9 1.1 2.4E-05 43.0 9.6 38 290-327 1-43 (262)
121 cd07877 STKc_p38alpha_MAPK14 C 91.9 0.73 1.6E-05 46.4 8.6 47 274-327 6-53 (345)
122 cd06645 STKc_MAP4K3 Catalytic 91.9 0.81 1.8E-05 43.5 8.5 32 289-327 14-45 (267)
123 cd05575 STKc_SGK Catalytic dom 91.8 1.1 2.4E-05 44.5 9.7 29 291-326 2-30 (323)
124 cd05604 STKc_SGK3 Catalytic do 91.7 0.84 1.8E-05 45.5 8.7 29 291-326 2-30 (325)
125 cd08224 STKc_Nek6_Nek7 Catalyt 91.7 1.1 2.5E-05 42.2 9.3 31 289-326 7-37 (267)
126 cd05595 STKc_PKB_beta Catalyti 91.6 0.9 2E-05 45.3 8.9 29 291-326 2-30 (323)
127 cd05618 STKc_aPKC_iota Catalyt 91.6 0.96 2.1E-05 45.4 9.1 31 290-327 1-31 (329)
128 cd05038 PTKc_Jak_rpt2 Catalyti 91.6 1.1 2.3E-05 42.7 9.1 36 290-328 10-45 (284)
129 cd05080 PTKc_Tyk2_rpt2 Catalyt 91.6 1.7 3.7E-05 41.9 10.4 35 290-327 10-44 (283)
130 cd05616 STKc_cPKC_beta Catalyt 91.5 1.1 2.4E-05 44.5 9.4 32 289-327 5-36 (323)
131 KOG0583 Serine/threonine prote 91.5 0.86 1.9E-05 47.7 8.9 32 289-327 22-53 (370)
132 cd05059 PTKc_Tec_like Catalyti 91.5 1.1 2.4E-05 42.4 9.0 31 289-327 9-39 (256)
133 cd05065 PTKc_EphR_B Catalytic 91.4 1.3 2.8E-05 42.2 9.4 35 289-327 9-43 (269)
134 cd06658 STKc_PAK5 Catalytic do 91.4 0.68 1.5E-05 45.4 7.6 36 280-324 20-55 (292)
135 PHA02988 hypothetical protein; 91.4 1.3 2.7E-05 43.4 9.5 31 287-326 23-53 (283)
136 cd05587 STKc_cPKC Catalytic do 91.3 1.1 2.5E-05 44.5 9.2 32 289-327 5-36 (324)
137 cd07840 STKc_CDK9_like Catalyt 91.3 1.1 2.3E-05 42.8 8.6 32 290-328 5-36 (287)
138 cd05585 STKc_YPK1_like Catalyt 91.3 1.3 2.8E-05 43.8 9.6 27 292-325 1-27 (312)
139 cd06639 STKc_myosinIIIB Cataly 91.3 1.1 2.5E-05 43.3 8.9 31 289-326 27-57 (291)
140 PF01636 APH: Phosphotransfera 91.1 0.67 1.4E-05 42.7 6.9 77 290-421 3-84 (239)
141 cd05614 STKc_MSK2_N N-terminal 91.1 1.5 3.2E-05 43.7 9.7 32 290-325 6-37 (332)
142 PF07714 Pkinase_Tyr: Protein 91.1 1.2 2.6E-05 42.8 8.8 91 290-426 5-95 (259)
143 cd05603 STKc_SGK2 Catalytic do 91.1 0.96 2.1E-05 44.9 8.4 29 291-326 2-30 (321)
144 cd05574 STKc_phototropin_like 91.1 1.3 2.9E-05 43.4 9.3 31 290-327 7-37 (316)
145 cd05628 STKc_NDR1 Catalytic do 91.0 0.89 1.9E-05 46.2 8.3 30 289-325 6-35 (363)
146 cd08220 STKc_Nek8 Catalytic do 91.0 1.2 2.5E-05 41.8 8.4 30 289-325 5-34 (256)
147 cd06648 STKc_PAK_II Catalytic 90.9 1.2 2.5E-05 43.4 8.7 29 289-324 24-52 (285)
148 cd05588 STKc_aPKC Catalytic do 90.9 1.3 2.8E-05 44.3 9.2 29 291-326 2-30 (329)
149 cd05570 STKc_PKC Catalytic dom 90.8 1.2 2.5E-05 44.4 8.7 29 291-326 2-30 (318)
150 cd05048 PTKc_Ror Catalytic Dom 90.8 2 4.2E-05 41.2 10.0 37 289-327 10-46 (283)
151 cd05599 STKc_NDR_like Catalyti 90.8 0.95 2.1E-05 45.7 8.2 30 289-325 6-35 (364)
152 cd05608 STKc_GRK1 Catalytic do 90.8 1.6 3.5E-05 42.2 9.6 27 292-325 1-27 (280)
153 KOG0574 STE20-like serine/thre 90.8 0.2 4.2E-06 51.8 3.2 104 267-425 18-121 (502)
154 cd05073 PTKc_Hck Catalytic dom 90.8 2.1 4.6E-05 40.6 10.1 112 289-455 11-125 (260)
155 cd05632 STKc_GRK5 Catalytic do 90.7 1.4 3E-05 42.8 9.0 31 290-327 6-36 (285)
156 cd07841 STKc_CDK7 Catalytic do 90.7 0.87 1.9E-05 44.1 7.5 32 290-328 6-37 (298)
157 cd05631 STKc_GRK4 Catalytic do 90.7 1.1 2.5E-05 43.4 8.4 32 289-327 5-36 (285)
158 cd05606 STKc_beta_ARK Catalyti 90.7 2.8 6E-05 40.6 11.0 29 291-326 1-29 (278)
159 cd05622 STKc_ROCK1 Catalytic d 90.6 0.92 2E-05 46.6 8.0 30 289-325 48-77 (371)
160 cd05620 STKc_nPKC_delta Cataly 90.6 1.7 3.7E-05 43.2 9.8 30 291-327 2-31 (316)
161 cd05060 PTKc_Syk_like Catalyti 90.6 1.9 4.1E-05 40.8 9.6 32 292-327 3-34 (257)
162 cd05615 STKc_cPKC_alpha Cataly 90.6 1.1 2.4E-05 44.8 8.3 30 290-326 6-35 (323)
163 cd05610 STKc_MASTL Catalytic d 90.4 0.53 1.2E-05 52.8 6.5 31 289-326 9-39 (669)
164 cd05578 STKc_Yank1 Catalytic d 90.4 1.4 3E-05 41.6 8.5 31 289-326 5-35 (258)
165 KOG4250 TANK binding protein k 90.4 0.35 7.6E-06 54.3 4.9 120 286-455 15-143 (732)
166 cd07872 STKc_PCTAIRE2 Catalyti 90.4 1.4 3E-05 43.3 8.7 32 289-327 11-42 (309)
167 cd07871 STKc_PCTAIRE3 Catalyti 90.3 1.9 4.1E-05 42.0 9.6 31 289-326 10-40 (288)
168 cd05036 PTKc_ALK_LTK Catalytic 90.3 2 4.2E-05 41.4 9.5 37 289-327 11-47 (277)
169 cd05602 STKc_SGK1 Catalytic do 90.2 1.3 2.8E-05 44.1 8.4 30 290-326 1-30 (325)
170 cd05113 PTKc_Btk_Bmx Catalytic 90.2 1.6 3.5E-05 41.5 8.8 30 290-327 10-39 (256)
171 cd05633 STKc_GRK3 Catalytic do 90.2 2.8 6.1E-05 40.6 10.7 30 291-327 1-30 (279)
172 cd07851 STKc_p38 Catalytic dom 90.2 0.72 1.6E-05 46.4 6.7 46 275-327 5-51 (343)
173 cd05105 PTKc_PDGFR_alpha Catal 90.1 1.1 2.5E-05 46.8 8.3 90 289-424 42-133 (400)
174 cd05607 STKc_GRK7 Catalytic do 90.1 1.3 2.8E-05 42.9 8.1 27 292-325 1-27 (277)
175 cd07848 STKc_CDKL5 Catalytic d 90.0 0.92 2E-05 43.7 7.0 32 289-327 6-37 (287)
176 cd06624 STKc_ASK Catalytic dom 90.0 2.3 5E-05 40.5 9.7 32 289-327 13-44 (268)
177 cd05082 PTKc_Csk Catalytic dom 90.0 1.6 3.5E-05 41.2 8.5 28 289-325 11-38 (256)
178 cd05057 PTKc_EGFR_like Catalyt 89.9 2.1 4.6E-05 41.1 9.4 89 290-425 13-101 (279)
179 cd05101 PTKc_FGFR2 Catalytic d 89.9 2.1 4.6E-05 41.8 9.6 39 289-327 20-58 (304)
180 cd05039 PTKc_Csk_like Catalyti 89.9 2.6 5.6E-05 39.8 9.8 30 289-327 11-40 (256)
181 cd05624 STKc_MRCK_beta Catalyt 89.8 1.7 3.7E-05 43.5 9.0 30 289-325 6-35 (331)
182 cd08215 STKc_Nek Catalytic dom 89.8 1.6 3.5E-05 40.5 8.2 30 290-326 6-35 (258)
183 cd05583 STKc_MSK_N N-terminal 89.7 2.3 5E-05 41.0 9.5 33 290-326 6-38 (288)
184 cd06621 PKc_MAPKK_Pek1_like Ca 89.5 3.7 8E-05 39.7 10.8 32 289-327 6-37 (287)
185 PTZ00024 cyclin-dependent prot 89.5 1.3 2.8E-05 44.0 7.8 32 289-327 14-45 (335)
186 cd07833 STKc_CDKL Catalytic do 89.4 1.7 3.7E-05 41.6 8.3 32 289-327 6-37 (288)
187 PRK10345 hypothetical protein; 89.4 1.2 2.5E-05 43.1 7.2 115 288-455 6-128 (210)
188 cd05596 STKc_ROCK Catalytic do 89.3 1.6 3.5E-05 44.7 8.6 30 289-325 48-77 (370)
189 cd05037 PTK_Jak_rpt1 Pseudokin 89.3 2 4.3E-05 40.3 8.5 21 405-425 73-93 (259)
190 cd05586 STKc_Sck1_like Catalyt 89.3 2.8 6.2E-05 41.7 10.1 27 292-325 1-27 (330)
191 cd08223 STKc_Nek4 Catalytic do 89.3 2.6 5.5E-05 39.6 9.3 29 290-325 6-34 (257)
192 cd05097 PTKc_DDR_like Catalyti 89.2 2.2 4.8E-05 41.5 9.1 40 290-329 11-57 (295)
193 cd06654 STKc_PAK1 Catalytic do 89.2 1.5 3.4E-05 42.9 8.0 29 290-325 26-54 (296)
194 cd05050 PTKc_Musk Catalytic do 89.1 2.7 5.8E-05 40.6 9.5 38 289-328 10-47 (288)
195 cd05623 STKc_MRCK_alpha Cataly 89.1 2 4.2E-05 43.0 8.8 30 289-325 6-35 (332)
196 cd07832 STKc_CCRK Catalytic do 89.0 2 4.4E-05 41.0 8.5 31 290-327 6-36 (286)
197 cd05601 STKc_CRIK Catalytic do 89.0 1.3 2.8E-05 44.0 7.4 31 289-326 6-36 (330)
198 cd05062 PTKc_IGF-1R Catalytic 89.0 3.6 7.7E-05 39.5 10.2 36 289-326 11-46 (277)
199 cd05076 PTK_Tyk2_rpt1 Pseudoki 89.0 2.7 5.9E-05 40.7 9.4 20 405-424 89-108 (274)
200 cd06656 STKc_PAK3 Catalytic do 88.9 3.3 7.1E-05 40.6 10.1 29 290-325 25-53 (297)
201 cd05079 PTKc_Jak1_rpt2 Catalyt 88.6 4.9 0.00011 38.8 10.9 36 290-328 10-45 (284)
202 cd06622 PKc_MAPKK_PBS2_like Ca 88.4 3.6 7.7E-05 39.6 9.8 30 290-326 7-36 (286)
203 cd07879 STKc_p38delta_MAPK13 C 88.3 0.66 1.4E-05 46.7 4.8 62 274-342 4-71 (342)
204 KOG1095 Protein tyrosine kinas 88.2 2.6 5.7E-05 49.7 10.1 121 289-455 697-825 (1025)
205 cd05042 PTKc_Aatyk Catalytic d 88.2 4.5 9.8E-05 38.5 10.3 32 291-327 2-33 (269)
206 cd05577 STKc_GRK Catalytic dom 88.2 2.8 6.1E-05 40.3 8.9 28 292-326 1-28 (277)
207 cd05613 STKc_MSK1_N N-terminal 88.1 4.4 9.6E-05 39.1 10.3 33 290-326 6-38 (290)
208 KOG2270 Serine/threonine prote 88.1 1 2.2E-05 48.1 6.1 117 268-416 132-248 (520)
209 cd05104 PTKc_Kit Catalytic dom 88.1 1.8 3.9E-05 44.4 7.9 38 289-328 40-77 (375)
210 cd08225 STKc_Nek5 Catalytic do 88.0 3.3 7.2E-05 38.8 9.1 29 289-324 5-33 (257)
211 cd08229 STKc_Nek7 Catalytic do 88.0 2.7 5.8E-05 39.8 8.5 30 289-325 7-36 (267)
212 cd05619 STKc_nPKC_theta Cataly 88.0 4 8.6E-05 40.7 10.1 31 291-328 2-32 (316)
213 cd08228 STKc_Nek6 Catalytic do 87.8 3.6 7.9E-05 38.9 9.3 30 289-325 7-36 (267)
214 cd05580 STKc_PKA Catalytic dom 87.8 2.8 6E-05 40.7 8.7 31 289-326 6-36 (290)
215 cd05572 STKc_cGK_PKG Catalytic 87.7 5 0.00011 38.0 10.2 29 292-327 1-29 (262)
216 cd05083 PTKc_Chk Catalytic dom 87.7 2.9 6.3E-05 39.4 8.6 29 289-326 11-39 (254)
217 TIGR02721 ycfN_thiK thiamine k 87.6 2.7 5.8E-05 40.8 8.4 76 290-421 2-77 (256)
218 cd05055 PTKc_PDGFR Catalytic d 87.6 4.6 0.0001 39.7 10.2 38 289-328 40-77 (302)
219 COG2112 Predicted Ser/Thr prot 87.5 1.3 2.9E-05 42.7 6.0 76 291-424 29-104 (201)
220 cd05103 PTKc_VEGFR2 Catalytic 87.5 1.8 3.9E-05 43.6 7.4 37 289-327 12-48 (343)
221 cd06615 PKc_MEK Catalytic doma 87.3 4.1 8.9E-05 40.1 9.7 33 289-328 6-38 (308)
222 cd06619 PKc_MKK5 Catalytic dom 87.2 3.4 7.5E-05 39.8 8.9 31 290-327 7-37 (279)
223 cd06652 STKc_MEKK2 Catalytic d 87.1 7.3 0.00016 36.9 11.0 31 289-326 7-37 (265)
224 cd06613 STKc_MAP4K3_like Catal 87.1 3.1 6.8E-05 39.1 8.4 32 289-327 8-39 (262)
225 cd05629 STKc_NDR_like_fungal C 87.0 2.3 5.1E-05 43.3 8.0 30 289-325 6-35 (377)
226 cd08219 STKc_Nek3 Catalytic do 87.0 4.6 0.0001 38.0 9.5 29 290-325 6-34 (255)
227 KOG0196 Tyrosine kinase, EPH ( 86.9 1.1 2.4E-05 51.3 5.9 147 256-455 603-754 (996)
228 cd05095 PTKc_DDR2 Catalytic do 86.9 4 8.6E-05 39.7 9.2 40 289-328 10-58 (296)
229 cd05098 PTKc_FGFR1 Catalytic d 86.9 4.4 9.6E-05 39.7 9.6 40 289-328 23-62 (307)
230 cd05157 ETNK_euk Ethanolamine 86.8 3.3 7.1E-05 39.3 8.3 80 288-421 2-81 (235)
231 cd05071 PTKc_Src Catalytic dom 86.8 4.9 0.00011 38.4 9.6 29 290-326 12-40 (262)
232 cd05046 PTK_CCK4 Pseudokinase 86.7 6.1 0.00013 37.6 10.2 34 290-325 11-44 (275)
233 cd06612 STKc_MST1_2 Catalytic 86.7 6.5 0.00014 36.7 10.3 30 289-325 8-37 (256)
234 cd06644 STKc_STK10_LOK Catalyt 86.7 6.6 0.00014 38.0 10.6 31 290-327 18-48 (292)
235 PRK15123 lipopolysaccharide co 86.6 3.2 6.9E-05 41.6 8.5 76 374-455 75-161 (268)
236 cd05621 STKc_ROCK2 Catalytic d 86.5 3.1 6.8E-05 42.7 8.7 30 289-325 48-77 (370)
237 cd07859 STKc_TDY_MAPK_plant Ca 86.4 5.2 0.00011 39.5 9.8 30 290-326 6-35 (338)
238 cd08528 STKc_Nek10 Catalytic d 86.4 4.4 9.6E-05 38.5 9.0 34 289-328 5-38 (269)
239 cd07830 STKc_MAK_like Catalyti 86.3 4.2 9.1E-05 38.8 8.9 31 290-327 5-35 (283)
240 cd06653 STKc_MEKK3_like_1 Cata 86.3 4.3 9.3E-05 38.6 8.9 32 289-327 7-38 (264)
241 cd06659 STKc_PAK6 Catalytic do 86.2 11 0.00023 37.1 11.9 30 290-326 27-56 (297)
242 cd05032 PTKc_InsR_like Catalyt 86.1 5.6 0.00012 37.8 9.6 37 289-327 11-47 (277)
243 cd07870 STKc_PFTAIRE2 Catalyti 86.0 4.9 0.00011 38.8 9.3 31 289-326 10-40 (291)
244 cd05102 PTKc_VEGFR3 Catalytic 85.8 1.9 4.2E-05 42.9 6.5 37 289-327 12-48 (338)
245 cd05582 STKc_RSK_N N-terminal 85.8 3.4 7.4E-05 40.9 8.3 33 290-326 2-34 (318)
246 cd05118 STKc_CMGC Catalytic do 85.7 4.6 9.9E-05 38.4 8.8 32 290-328 5-36 (283)
247 cd06655 STKc_PAK2 Catalytic do 85.6 5.5 0.00012 39.0 9.5 28 290-324 25-52 (296)
248 cd07874 STKc_JNK3 Catalytic do 85.6 4.3 9.3E-05 40.9 8.9 39 282-327 14-53 (355)
249 cd05090 PTKc_Ror1 Catalytic do 85.5 6.9 0.00015 37.6 10.0 34 290-326 11-44 (283)
250 cd05630 STKc_GRK6 Catalytic do 85.5 5.2 0.00011 38.9 9.2 31 290-327 6-36 (285)
251 KOG0032 Ca2+/calmodulin-depend 85.3 3.9 8.4E-05 43.2 8.8 118 290-455 41-158 (382)
252 cd07844 STKc_PCTAIRE_like Cata 85.2 5 0.00011 38.7 8.9 33 289-328 10-42 (291)
253 cd06647 STKc_PAK_I Catalytic d 85.1 4.7 0.0001 39.4 8.7 29 289-324 24-52 (293)
254 cd07846 STKc_CDKL2_3 Catalytic 85.1 4.4 9.6E-05 38.7 8.4 30 290-326 7-36 (286)
255 cd07876 STKc_JNK2 Catalytic do 85.0 3.3 7.1E-05 41.8 7.8 32 289-327 26-57 (359)
256 cd07829 STKc_CDK_like Catalyti 84.9 4.8 0.0001 38.2 8.5 32 290-328 5-36 (282)
257 cd05056 PTKc_FAK Catalytic dom 84.7 8.2 0.00018 36.7 10.1 36 289-328 11-46 (270)
258 cd05052 PTKc_Abl Catalytic dom 84.7 4.6 0.0001 38.4 8.3 32 289-327 11-42 (263)
259 cd06651 STKc_MEKK3 Catalytic d 84.6 9.6 0.00021 36.3 10.4 32 289-327 7-38 (266)
260 cd05066 PTKc_EphR_A Catalytic 84.5 7.9 0.00017 36.9 9.8 35 289-327 9-43 (267)
261 KOG4236 Serine/threonine prote 84.4 1.1 2.4E-05 49.5 4.2 116 278-450 558-675 (888)
262 cd07856 STKc_Sty1_Hog1 Catalyt 84.2 6.3 0.00014 39.5 9.4 31 289-326 15-45 (328)
263 PRK13184 pknD serine/threonine 84.1 5 0.00011 47.2 9.6 33 289-328 7-39 (932)
264 cd05051 PTKc_DDR Catalytic dom 84.0 13 0.00028 35.8 11.2 40 289-328 10-58 (296)
265 cd05089 PTKc_Tie1 Catalytic do 83.4 9.7 0.00021 37.1 10.1 32 289-325 7-38 (297)
266 PF06293 Kdo: Lipopolysacchari 83.3 2.3 4.9E-05 40.4 5.5 76 374-455 58-141 (206)
267 KOG0605 NDR and related serine 83.1 5.2 0.00011 44.0 8.6 33 286-325 142-175 (550)
268 cd06634 STKc_TAO2 Catalytic do 83.0 9.8 0.00021 37.4 10.1 42 276-326 9-50 (308)
269 cd05116 PTKc_Syk Catalytic dom 82.9 15 0.00033 34.7 11.0 32 291-327 2-33 (257)
270 cd08218 STKc_Nek1 Catalytic do 82.7 8.2 0.00018 36.2 9.0 29 289-324 5-33 (256)
271 PTZ00426 cAMP-dependent protei 82.3 5.3 0.00012 40.5 8.1 31 289-325 35-65 (340)
272 PLN00113 leucine-rich repeat r 82.1 5.1 0.00011 46.3 8.7 30 289-325 695-724 (968)
273 cd05100 PTKc_FGFR3 Catalytic d 82.1 15 0.00032 36.6 11.1 39 289-327 17-55 (334)
274 PTZ00284 protein kinase; Provi 82.1 5.4 0.00012 42.2 8.3 30 289-325 134-163 (467)
275 KOG0581 Mitogen-activated prot 82.1 2.7 5.8E-05 44.2 5.8 32 290-328 85-116 (364)
276 cd05109 PTKc_HER2 Catalytic do 81.9 16 0.00034 35.0 10.8 36 289-327 12-47 (279)
277 cd05047 PTKc_Tie Catalytic dom 81.7 15 0.00033 35.0 10.6 32 290-326 1-32 (270)
278 cd05148 PTKc_Srm_Brk Catalytic 81.7 5 0.00011 37.8 7.2 31 289-327 11-41 (261)
279 cd05088 PTKc_Tie2 Catalytic do 81.5 15 0.00033 36.0 10.7 19 289-307 12-30 (303)
280 cd08227 PK_STRAD_alpha Pseudok 81.5 7.2 0.00016 38.7 8.5 29 292-327 6-36 (327)
281 cd05094 PTKc_TrkC Catalytic do 81.4 11 0.00023 36.6 9.6 36 289-326 10-45 (291)
282 cd07854 STKc_MAPK4_6 Catalytic 81.4 10 0.00023 38.0 9.7 31 289-326 10-40 (342)
283 cd05053 PTKc_FGFR Catalytic do 81.3 19 0.0004 34.7 11.1 37 289-327 17-53 (293)
284 cd05078 PTK_Jak2_Jak3_rpt1 Pse 81.3 3.8 8.2E-05 38.9 6.2 18 290-307 1-18 (258)
285 cd08217 STKc_Nek2 Catalytic do 81.1 10 0.00023 35.3 9.0 30 290-326 6-35 (265)
286 cd07849 STKc_ERK1_2_like Catal 81.0 7 0.00015 39.0 8.3 31 289-326 10-40 (336)
287 PHA03390 pk1 serine/threonine- 80.9 9.5 0.00021 36.7 8.9 28 292-326 24-51 (267)
288 PRK05231 homoserine kinase; Pr 80.8 15 0.00032 36.7 10.5 50 261-325 5-54 (319)
289 cd07875 STKc_JNK1 Catalytic do 80.7 8.5 0.00018 38.9 8.8 31 289-326 29-59 (364)
290 KOG0615 Serine/threonine prote 80.6 3.4 7.3E-05 44.4 5.9 32 289-327 177-208 (475)
291 KOG0611 Predicted serine/threo 80.5 2.7 5.8E-05 45.3 5.2 103 290-448 59-162 (668)
292 cd06643 STKc_SLK Catalytic dom 79.7 10 0.00022 36.4 8.7 31 290-327 11-41 (282)
293 KOG0193 Serine/threonine prote 79.6 1.1 2.3E-05 50.0 1.9 36 280-325 387-423 (678)
294 KOG0667 Dual-specificity tyros 79.4 1.6 3.4E-05 48.6 3.2 48 289-343 191-240 (586)
295 cd08530 STKc_CNK2-like Catalyt 78.9 8.6 0.00019 35.8 7.7 31 289-326 5-35 (256)
296 cd05058 PTKc_Met_Ron Catalytic 78.8 25 0.00055 33.0 11.0 31 291-325 2-32 (262)
297 cd07860 STKc_CDK2_3 Catalytic 78.7 3.2 6.9E-05 39.8 4.8 47 289-342 5-56 (284)
298 cd07868 STKc_CDK8 Catalytic do 78.6 3.9 8.5E-05 40.1 5.5 51 287-342 4-55 (317)
299 cd08226 PK_STRAD_beta Pseudoki 78.6 17 0.00037 36.1 10.1 27 294-327 10-36 (328)
300 PTZ00283 serine/threonine prot 78.5 9.1 0.0002 41.3 8.7 31 289-326 37-67 (496)
301 KOG0197 Tyrosine kinases [Sign 78.4 6.8 0.00015 42.7 7.5 110 290-455 212-326 (468)
302 cd08221 STKc_Nek9 Catalytic do 78.0 19 0.00042 33.7 9.9 28 290-324 6-33 (256)
303 cd05150 APH Aminoglycoside 3'- 77.6 3.4 7.4E-05 39.5 4.7 44 373-422 37-82 (244)
304 cd05075 PTKc_Axl Catalytic dom 77.5 17 0.00037 34.4 9.4 33 290-327 5-37 (272)
305 PLN02876 acyl-CoA dehydrogenas 76.7 21 0.00045 41.3 11.3 111 263-421 18-133 (822)
306 KOG2268 Serine/threonine prote 76.4 2.7 5.9E-05 44.4 3.7 40 376-422 159-198 (465)
307 cd05045 PTKc_RET Catalytic dom 76.0 21 0.00045 34.5 9.7 37 290-328 6-42 (290)
308 cd07864 STKc_CDK12 Catalytic d 75.5 4.1 9E-05 39.4 4.6 33 289-328 12-44 (302)
309 KOG0199 ACK and related non-re 75.4 6.9 0.00015 44.8 6.7 86 290-423 116-201 (1039)
310 cd07847 STKc_CDKL1_4 Catalytic 75.1 4.5 9.8E-05 38.6 4.7 46 290-342 7-57 (286)
311 KOG0194 Protein tyrosine kinas 74.6 16 0.00035 39.9 9.2 92 290-425 163-254 (474)
312 cd07835 STKc_CDK1_like Catalyt 74.2 4.9 0.00011 38.5 4.7 45 290-341 5-54 (283)
313 cd05093 PTKc_TrkB Catalytic do 73.8 24 0.00051 34.1 9.5 34 289-324 10-43 (288)
314 cd07867 STKc_CDC2L6 Catalytic 73.8 5.3 0.00012 39.0 5.0 51 287-342 4-55 (317)
315 cd08222 STKc_Nek11 Catalytic d 73.7 10 0.00023 35.7 6.8 30 290-326 6-35 (260)
316 cd05155 APH_ChoK_like_1 Unchar 73.6 5.7 0.00012 38.0 5.0 46 373-422 34-84 (235)
317 cd07861 STKc_CDK1_euk Catalyti 73.6 5.2 0.00011 38.2 4.8 46 290-342 6-56 (285)
318 cd07863 STKc_CDK4 Catalytic do 73.4 6 0.00013 37.9 5.2 47 290-343 6-57 (288)
319 KOG3087 Serine/threonine prote 72.8 26 0.00056 34.5 9.1 44 375-423 58-102 (229)
320 PRK12396 5-methylribose kinase 72.8 11 0.00024 40.4 7.3 143 258-449 5-147 (409)
321 cd05099 PTKc_FGFR4 Catalytic d 72.2 43 0.00093 32.9 11.0 39 289-327 17-55 (314)
322 cd05107 PTKc_PDGFR_beta Cataly 72.0 6.9 0.00015 41.1 5.6 52 289-342 42-97 (401)
323 cd06633 STKc_TAO3 Catalytic do 72.0 6.8 0.00015 38.7 5.3 43 276-327 15-57 (313)
324 PLN03224 probable serine/threo 71.9 20 0.00043 39.4 9.2 38 289-326 150-196 (507)
325 cd06638 STKc_myosinIIIA Cataly 71.8 6.1 0.00013 37.9 4.8 48 289-343 23-72 (286)
326 cd08216 PK_STRAD Pseudokinase 70.1 24 0.00052 34.4 8.6 20 406-425 73-92 (314)
327 KOG1187 Serine/threonine prote 69.9 5.9 0.00013 41.4 4.5 49 286-342 76-128 (361)
328 cd05576 STKc_RPK118_like Catal 69.2 29 0.00063 32.6 8.7 26 295-327 4-29 (237)
329 cd07869 STKc_PFTAIRE1 Catalyti 68.1 7.3 0.00016 38.1 4.5 32 289-327 10-41 (303)
330 cd05153 HomoserineK_II Homoser 67.1 40 0.00087 33.1 9.5 30 288-326 18-47 (296)
331 cd07862 STKc_CDK6 Catalytic do 65.7 11 0.00024 36.2 5.2 48 289-342 6-58 (290)
332 PLN02236 choline kinase 65.2 56 0.0012 33.7 10.5 103 266-420 17-121 (344)
333 PRK06148 hypothetical protein; 64.8 36 0.00078 40.5 10.0 56 256-327 4-59 (1013)
334 cd07842 STKc_CDK8_like Catalyt 64.7 9.7 0.00021 37.0 4.6 48 290-342 6-59 (316)
335 cd07845 STKc_CDK10 Catalytic d 64.6 9.8 0.00021 37.2 4.6 47 289-342 12-63 (309)
336 PTZ00266 NIMA-related protein 64.3 40 0.00086 40.3 10.1 31 289-326 18-48 (1021)
337 cd05074 PTKc_Tyro3 Catalytic d 63.9 11 0.00024 35.7 4.8 50 289-342 4-58 (273)
338 cd07873 STKc_PCTAIRE1 Catalyti 63.2 11 0.00024 36.7 4.7 34 289-329 11-44 (301)
339 cd07839 STKc_CDK5 Catalytic do 62.9 12 0.00026 35.8 4.8 46 290-342 6-56 (284)
340 cd07837 STKc_CdkB_plant Cataly 62.8 12 0.00026 36.0 4.8 46 290-342 7-57 (295)
341 cd07838 STKc_CDK4_6_like Catal 62.3 13 0.00027 35.5 4.8 47 290-343 5-56 (287)
342 KOG1166 Mitotic checkpoint ser 61.8 8.3 0.00018 45.5 4.0 46 289-342 703-748 (974)
343 KOG0610 Putative serine/threon 61.7 23 0.00049 38.3 6.8 84 290-423 83-168 (459)
344 PRK01723 3-deoxy-D-manno-octul 61.5 16 0.00035 35.6 5.5 72 374-455 87-165 (239)
345 cd05043 PTK_Ryk Pseudokinase d 60.7 95 0.0021 29.6 10.6 35 289-326 11-45 (280)
346 cd07853 STKc_NLK Catalytic dom 60.6 12 0.00025 38.1 4.5 31 289-326 5-35 (372)
347 cd06617 PKc_MKK3_6 Catalytic d 60.5 12 0.00026 35.7 4.3 33 290-329 7-39 (283)
348 COG3001 Uncharacterized protei 60.2 43 0.00093 34.0 8.1 96 265-420 2-99 (286)
349 cd07857 STKc_MPK1 Catalytic do 60.1 50 0.0011 32.8 8.9 31 290-325 6-36 (332)
350 KOG1163 Casein kinase (serine/ 58.8 8.7 0.00019 39.1 3.0 33 290-329 21-53 (341)
351 cd05035 PTKc_Axl_like Catalyti 58.6 19 0.00041 34.0 5.2 36 289-328 4-39 (273)
352 cd05108 PTKc_EGFR Catalytic do 57.1 22 0.00047 35.0 5.6 38 289-329 12-49 (316)
353 cd07850 STKc_JNK Catalytic dom 56.4 14 0.0003 37.2 4.1 30 289-325 21-50 (353)
354 PLN00009 cyclin-dependent kina 56.1 15 0.00033 35.4 4.3 47 289-342 7-58 (294)
355 cd07866 STKc_BUR1 Catalytic do 56.0 17 0.00036 35.1 4.5 47 289-342 13-64 (311)
356 PTZ00267 NIMA-related protein 55.6 50 0.0011 35.3 8.4 30 289-324 72-101 (478)
357 cd05156 ChoK_euk Choline Kinas 55.3 40 0.00087 33.3 7.2 84 289-421 3-86 (302)
358 cd06618 PKc_MKK7 Catalytic dom 55.2 14 0.0003 35.9 3.8 32 289-327 20-51 (296)
359 cd06607 STKc_TAO Catalytic dom 55.1 32 0.00069 33.6 6.4 39 279-326 12-50 (307)
360 PTZ00036 glycogen synthase kin 54.3 17 0.00037 38.4 4.6 46 289-342 71-116 (440)
361 KOG4721 Serine/threonine prote 54.2 7.9 0.00017 43.4 2.1 42 289-343 129-170 (904)
362 cd05092 PTKc_TrkA Catalytic do 53.3 90 0.002 29.9 9.1 34 289-324 10-43 (280)
363 cd07865 STKc_CDK9 Catalytic do 53.2 21 0.00045 34.5 4.6 31 289-326 17-47 (310)
364 PHA03209 serine/threonine kina 51.8 19 0.00042 36.5 4.4 43 289-341 71-113 (357)
365 TIGR00938 thrB_alt homoserine 51.1 97 0.0021 30.9 9.2 30 289-327 27-56 (307)
366 KOG0198 MEKK and related serin 49.7 74 0.0016 33.0 8.2 28 289-323 22-49 (313)
367 TIGR02172 Fb_sc_TIGR02172 Fibr 49.3 32 0.00069 33.3 5.3 73 289-418 6-80 (226)
368 cd07858 STKc_TEY_MAPK_plant Ca 49.0 25 0.00054 35.1 4.6 33 289-328 10-42 (337)
369 KOG0594 Protein kinase PCTAIRE 48.8 23 0.0005 36.9 4.3 55 281-344 10-69 (323)
370 cd07855 STKc_ERK5 Catalytic do 48.7 25 0.00054 35.0 4.6 33 289-328 10-42 (334)
371 KOG0600 Cdc2-related protein k 48.5 20 0.00044 39.5 4.0 58 277-343 112-174 (560)
372 PRK12274 serine/threonine prot 47.9 33 0.00071 33.8 5.1 66 375-455 49-114 (218)
373 cd05106 PTKc_CSF-1R Catalytic 47.5 30 0.00064 35.6 5.0 52 289-342 43-98 (374)
374 KOG0200 Fibroblast/platelet-de 47.4 26 0.00056 39.1 4.9 53 291-343 303-359 (609)
375 KOG0582 Ste20-like serine/thre 47.0 49 0.0011 36.2 6.5 27 291-324 33-59 (516)
376 PHA03207 serine/threonine kina 46.5 31 0.00067 35.5 5.0 47 289-342 97-143 (392)
377 cd05110 PTKc_HER4 Catalytic do 46.3 29 0.00062 34.0 4.5 39 289-330 12-50 (303)
378 cd05054 PTKc_VEGFR Catalytic d 45.7 28 0.00061 35.1 4.4 38 289-328 12-49 (337)
379 cd06616 PKc_MKK4 Catalytic dom 45.6 29 0.00063 33.3 4.3 33 289-328 9-41 (288)
380 cd07843 STKc_CDC2L1 Catalytic 45.0 32 0.0007 33.1 4.6 32 289-327 10-41 (293)
381 cd05091 PTKc_Ror2 Catalytic do 44.6 48 0.001 31.6 5.7 43 290-334 11-53 (283)
382 KOG0658 Glycogen synthase kina 44.4 27 0.00058 36.9 4.1 46 288-341 28-73 (364)
383 KOG1989 ARK protein kinase fam 44.2 76 0.0016 36.7 7.8 30 289-325 42-71 (738)
384 PLN03225 Serine/threonine-prot 43.4 32 0.00068 38.1 4.7 36 289-327 137-172 (566)
385 PHA03212 serine/threonine kina 40.7 32 0.00069 35.8 4.0 43 290-342 98-140 (391)
386 cd07834 STKc_MAPK Catalytic do 40.5 44 0.00095 32.9 4.8 47 289-342 5-56 (330)
387 KOG0597 Serine-threonine prote 37.9 38 0.00082 38.3 4.1 31 290-327 8-38 (808)
388 KOG3653 Transforming growth fa 36.9 27 0.00059 38.3 2.8 42 290-340 216-257 (534)
389 PRK06149 hypothetical protein; 35.4 1.4E+02 0.003 35.5 8.6 60 252-328 6-65 (972)
390 PF07914 DUF1679: Protein of u 35.3 40 0.00086 36.1 3.8 141 262-424 12-167 (414)
391 cd07831 STKc_MOK Catalytic dom 35.1 50 0.0011 31.3 4.1 32 290-328 5-36 (282)
392 KOG0575 Polo-like serine/threo 34.8 46 0.001 37.3 4.2 47 290-343 24-76 (592)
393 PF09192 Act-Frag_cataly: Acti 33.7 35 0.00075 34.8 2.9 16 408-423 124-139 (275)
394 PHA03211 serine/threonine kina 33.1 53 0.0012 35.4 4.4 44 289-342 174-217 (461)
395 TIGR01767 MTRK 5-methylthiorib 32.1 1.5E+02 0.0033 31.5 7.4 85 292-420 3-88 (370)
396 KOG0585 Ca2+/calmodulin-depend 31.4 3.4E+02 0.0075 30.3 9.9 96 290-422 103-200 (576)
397 KOG0578 p21-activated serine/t 29.9 2.9E+02 0.0062 31.0 9.2 37 279-324 270-306 (550)
398 KOG0983 Mitogen-activated prot 29.6 75 0.0016 33.1 4.4 43 290-339 98-144 (391)
399 PF12844 HTH_19: Helix-turn-he 29.3 2.5E+02 0.0053 21.1 6.5 62 218-288 2-63 (64)
400 PLN02421 phosphotransferase, a 29.0 2.8E+02 0.006 28.3 8.6 83 286-420 16-98 (330)
401 PF04655 APH_6_hur: Aminoglyco 28.2 63 0.0014 32.3 3.6 32 290-329 8-39 (253)
402 COG0515 SPS1 Serine/threonine 28.1 4.4E+02 0.0096 23.9 9.0 33 290-332 6-38 (384)
403 cd07852 STKc_MAPK15 Catalytic 26.4 1E+02 0.0022 30.6 4.8 31 289-326 12-42 (337)
404 KOG0580 Serine/threonine prote 25.4 71 0.0015 32.5 3.4 45 286-337 23-74 (281)
405 KOG1094 Discoidin domain recep 25.2 75 0.0016 36.1 3.8 41 289-337 543-583 (807)
406 KOG2269 Serine/threonine prote 25.0 56 0.0012 34.9 2.6 35 375-416 333-367 (531)
407 cd05111 PTK_HER3 Pseudokinase 24.5 1E+02 0.0022 29.6 4.3 38 289-329 12-49 (279)
408 PTZ00296 choline kinase; Provi 24.2 6.7E+02 0.014 27.1 10.7 122 250-420 70-194 (442)
409 KOG0588 Serine/threonine prote 23.5 73 0.0016 36.6 3.3 48 289-343 17-70 (786)
410 PF13443 HTH_26: Cro/C1-type H 23.3 2.1E+02 0.0046 21.4 5.0 58 220-285 2-59 (63)
411 KOG0593 Predicted protein kina 23.3 1.6E+02 0.0034 31.2 5.4 45 291-342 9-58 (396)
412 KOG1025 Epidermal growth facto 22.9 2.4E+02 0.0052 33.6 7.2 37 288-327 700-736 (1177)
413 KOG0608 Warts/lats-like serine 22.8 1.6E+02 0.0034 34.1 5.6 75 365-455 673-752 (1034)
414 KOG0660 Mitogen-activated prot 22.4 67 0.0014 34.0 2.6 48 289-343 27-79 (359)
415 KOG0201 Serine/threonine prote 22.4 91 0.002 34.0 3.7 44 279-331 10-53 (467)
416 cd05124 AFK Actin-Fragmin Kina 21.0 39 0.00084 33.8 0.5 23 403-425 88-110 (238)
417 KOG0661 MAPK related serine/th 20.7 95 0.0021 34.3 3.4 43 291-342 17-59 (538)
418 PRK09902 hypothetical protein; 20.4 2.3E+02 0.005 27.9 5.8 90 287-423 21-117 (216)
419 PF05402 PqqD: Coenzyme PQQ sy 20.3 86 0.0019 24.1 2.3 43 413-455 25-68 (68)
420 PF01633 Choline_kinase: Choli 20.2 2E+02 0.0043 26.9 5.2 41 373-421 19-59 (211)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-67 Score=557.26 Aligned_cols=236 Identities=35% Similarity=0.500 Sum_probs=224.9
Q ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccc
Q 012848 211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEA 290 (455)
Q Consensus 211 ~~r~~w~~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~ 290 (455)
..++.-.++|+.+|++|||+|||+||++|||||++|++|+++|++|||++||+|+++++++|+++||++++|+|++||++
T Consensus 52 ~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~ 131 (517)
T COG0661 52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPE 131 (517)
T ss_pred HHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 33555678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHcc-ccCccccCHHHHHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSV-IPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~-~P~l~~l~l~e~v~ef~~~l~ 369 (455)
|+|||||||||+|+|++ |++||||||||||++.|+.||.+|+.++++.+. .|+.+.+++.++++||.+.+.
T Consensus 132 PiAsASIaQVH~A~L~s--------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 132 PIASASIAQVHRAVLKS--------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred chhhhhHhhheeEEecC--------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 99999999999999987 699999999999999999999999999999874 566577999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf 449 (455)
.||||++||+|+++|++||++++.|+||+|||++||++||||||++|++++|+ +.++..+.+++++|..++++|++|+|
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~-~~l~~~g~d~k~ia~~~~~~f~~q~~ 282 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDI-AALKSAGIDRKELAELLVRAFLRQLL 282 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccH-HHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997 45566788899999999999999999
Q ss_pred ccCCCC
Q 012848 450 VPYLNN 455 (455)
Q Consensus 450 ~dgFv~ 455 (455)
+|||||
T Consensus 283 ~dgffH 288 (517)
T COG0661 283 RDGFFH 288 (517)
T ss_pred hcCccc
Confidence 999999
No 2
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-61 Score=514.58 Aligned_cols=227 Identities=31% Similarity=0.459 Sum_probs=218.7
Q ss_pred HHHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccC
Q 012848 217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGS 296 (455)
Q Consensus 217 ~~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASAS 296 (455)
+++|++++++|||+|||+||.+|||+|++|+||.++|+.|||++||.|++++.++||+|+|.+++++|.+||++||||||
T Consensus 94 a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaAS 173 (538)
T KOG1235|consen 94 AERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAAS 173 (538)
T ss_pred HHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHc-cccCccccCHHHHHHHHHHHHHHhcCHH
Q 012848 297 IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLA 375 (455)
Q Consensus 297 IAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~-~~P~l~~l~l~e~v~ef~~~l~~ELDfr 375 (455)
|||||||+|++ |++|||||||||+++.+..|+.+|+.++++++ ++|.++ +..+++|+++.|.+||||.
T Consensus 174 laQVhrA~L~~--------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~---~~~lvdE~~~~L~~ELDF~ 242 (538)
T KOG1235|consen 174 LAQVHRARLKN--------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFD---LVWLVDEIAKSLPQELDFT 242 (538)
T ss_pred hhheEEEEecC--------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCc---hhhHHHHHHhhhHhhcchH
Confidence 99999999996 69999999999999999999999999999886 678764 6788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC---CeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccC
Q 012848 376 REAAHLSRFIYNFRRWK---DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPY 452 (455)
Q Consensus 376 ~EA~nl~rf~~~f~~~~---~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dg 452 (455)
+||+|.++|+++|++.+ .|+||+|||++||+|||||||++|++++|. +.++.++..+.+++..++++|+.|||.+|
T Consensus 243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~i~~~l~~~~~~qIf~~G 321 (538)
T KOG1235|consen 243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHDILNKLVEAYLEQIFKTG 321 (538)
T ss_pred HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH-HHHHHcCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988 899999999999999999999999999996 78888999999999999999999999999
Q ss_pred CCC
Q 012848 453 LNN 455 (455)
Q Consensus 453 Fv~ 455 (455)
|||
T Consensus 322 ffH 324 (538)
T KOG1235|consen 322 FFH 324 (538)
T ss_pred Ccc
Confidence 999
No 3
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-60 Score=485.90 Aligned_cols=272 Identities=46% Similarity=0.760 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCC
Q 012848 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAP 261 (455)
Q Consensus 182 ~~~~~R~~~l~~~f~p~~~~~pl~~~~~~~~r~~w~~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vp 261 (455)
+..-.|...+.+.|+|..+++|+. ..++++..|++.|++++|..||+|||+|||+|||+|+|++++|.+|++||.+++
T Consensus 88 ily~~r~~~l~~fffpllll~~~t--~~~r~s~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt 165 (565)
T KOG1236|consen 88 ILYHLRLWLLLVFFFPLLLLYPLT--YLPRFSTLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVT 165 (565)
T ss_pred eeehhHHHHHHHHhhhHHHhcccc--ccCchHHHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCC
Confidence 344567777889999999999988 457789999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhCC-ChHhhccccccccccccCcceEEEeEecccCCCC--------CcCCeEEEEEeeCCCcccch
Q 012848 262 EHSFAYTKKTIERAFGR-RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQ--------KVKPIVVAVKVRHPGVGESI 332 (455)
Q Consensus 262 p~~~~~v~~vle~elG~-~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~--------~~~G~~VAVKVqrPgV~~~i 332 (455)
||+|..+++.|++++|. +++|||++||+.|||||||||||+|+++..|.++ +...++|||||.||||+++|
T Consensus 166 ~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~i 245 (565)
T KOG1236|consen 166 PHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQI 245 (565)
T ss_pred CCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHH
Confidence 99999999999999998 9999999999999999999999999998765432 23458999999999999999
Q ss_pred HhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEee
Q 012848 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412 (455)
Q Consensus 333 ~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE 412 (455)
+.|+.||++.|++.+++|.+.|+++++.+++|...|..|+|+++||.|+.+|..||++++.|.+|+|+.+++++.||+++
T Consensus 246 r~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~ 325 (565)
T KOG1236|consen 246 RLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVET 325 (565)
T ss_pred HHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 413 YEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 413 ~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
|++|.++..+++...+.+.+.+++|+.|++++++|++.|||+|
T Consensus 326 ~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvH 368 (565)
T KOG1236|consen 326 YERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVH 368 (565)
T ss_pred ccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhccee
Confidence 9999999999988778888899999999999999999999998
No 4
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.3e-58 Score=493.11 Aligned_cols=231 Identities=30% Similarity=0.402 Sum_probs=220.4
Q ss_pred HHHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccC
Q 012848 217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGS 296 (455)
Q Consensus 217 ~~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASAS 296 (455)
+++++.+||++||+|||+||++|||+|++|++||++|++|||++||+|+++++++|+++||.+++++|.+||++|+||||
T Consensus 52 ~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaS 131 (537)
T PRK04750 52 GERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASAS 131 (537)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHc-cccCccccCHHHHHHHHHHHHHHhcCHH
Q 012848 297 IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLA 375 (455)
Q Consensus 297 IAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~-~~P~l~~l~l~e~v~ef~~~l~~ELDfr 375 (455)
|||||+|+++++ |++|||||||||+++.|..|+.+|+.++++++ +.|..+++++.++++||.+.+.+|+||.
T Consensus 132 iaQVh~A~l~~~-------G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 132 IAQVHFARLKDN-------GREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred ccEEEEEEECCC-------CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 999999999862 69999999999999999999999999999887 6788888999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 376 ~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
+||+|+.+|+++|++.+.|+||++||+|||++||||||++|.+++++ +.+...+.+++.+|+.++++|++|+|+|||||
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~-~~l~~~g~d~~~la~~~v~~~~~Qif~~GffH 283 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV-AALRAAGTDMKLLAERGVEVFFTQVFRDGFFH 283 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHhCCeee
Confidence 99999999999999999999999999999999999999999999985 34555666788999999999999999999999
No 5
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=4.9e-56 Score=465.69 Aligned_cols=230 Identities=34% Similarity=0.452 Sum_probs=217.2
Q ss_pred HHHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccC
Q 012848 217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGS 296 (455)
Q Consensus 217 ~~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASAS 296 (455)
+++++++|+++||+|||+||++|||+|++|++||++|++|||++||+|+++++++|+++||.+++++|.+||++|+||||
T Consensus 50 ~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaS 129 (437)
T TIGR01982 50 GERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAAS 129 (437)
T ss_pred HHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeee
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHc-cccCccccCHHHHHHHHHHHHHHhcCHH
Q 012848 297 IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLA 375 (455)
Q Consensus 297 IAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~-~~P~l~~l~l~e~v~ef~~~l~~ELDfr 375 (455)
|||||+|++++ |++|||||||||+.+.+..|+.+|+.++++.+ +.|..+.+++.++++||...+.+|+||.
T Consensus 130 igQVh~A~l~~--------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 130 IAQVHRARLVD--------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred hhheEEEEecC--------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 99999999986 69999999999999999999999999999876 6787788899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 376 ~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
+||+|+++|+++|++++.|.||++|+++||++||||||++|.+++++... ...+....+++..+++++++|++.+||+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~ia~~~~~~~l~ql~~~g~~H 280 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL-DEAGLDRKALAENLARSFLNQVLRDGFFH 280 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH-HhcCCCHHHHHHHHHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999999999999999987532 22333567899999999999999999998
No 6
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=100.00 E-value=1.8e-35 Score=259.83 Aligned_cols=119 Identities=41% Similarity=0.621 Sum_probs=113.8
Q ss_pred HHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCcc
Q 012848 274 RAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK 353 (455)
Q Consensus 274 ~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~ 353 (455)
++||++++++|++||++|+|||||||||+|+|++ |++||||||||||++.+..||.+|+.++++++.++...
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~--------g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~ 72 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKD--------GEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR 72 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecc--------cchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 5799999999999999999999999999999986 69999999999999999999999999999998776555
Q ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCccc
Q 012848 354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400 (455)
Q Consensus 354 ~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~ 400 (455)
++++.+++++|.+.+.+|+||++||+|+++|+++|+++++|+||+||
T Consensus 73 ~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 73 RLDLEEIVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred ccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 88999999999999999999999999999999999999999999997
No 7
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=99.98 E-value=5.7e-33 Score=273.22 Aligned_cols=201 Identities=23% Similarity=0.232 Sum_probs=188.7
Q ss_pred CCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEE
Q 012848 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAV 321 (455)
Q Consensus 242 ~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAV 321 (455)
..++|+...+.|++.++.+-.+|..++.+++.+++|.+|.+-|++||+.|.|+|||||||+|++++ |.+|||
T Consensus 7 ~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~--------g~eVav 78 (363)
T KOG1234|consen 7 GSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLAD--------GPEVAV 78 (363)
T ss_pred CCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcC--------CCeeee
Confidence 358999999999999999999999999999999999999999999999999999999999999986 699999
Q ss_pred EeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccC
Q 012848 322 KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401 (455)
Q Consensus 322 KVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~ 401 (455)
|||||||.+.|+.|+..+..++++.+++|. .+.++..++..++.|..|+||++||+.+++|+..++++++++||.++.
T Consensus 79 KiQYPGva~sI~SD~~nl~~lLn~s~llPk--GLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~ 156 (363)
T KOG1234|consen 79 KIQYPGVARSIDSDANNLSRLLNFSGLLPK--GLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVD 156 (363)
T ss_pred ecCCCchhhhccCcHHHHHHHHhhcccccc--cccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHH
Confidence 999999999999999999999999999984 567889999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 402 ~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
++||.+||+||.+.|.+|+.... ..+..+..++..+++..|+-||+..|++
T Consensus 157 Elct~rvlt~el~~G~pid~~~~---~sQ~~rn~i~~~~l~lcLrEif~f~fMQ 207 (363)
T KOG1234|consen 157 ELCTVRVLTLELGQGLPIDKTAK---LSQETRNYIGYKLLELCLREIFEFRFMQ 207 (363)
T ss_pred hhccchhhhhhhhcCccchhhhc---ccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999987532 2445678999999999999999999875
No 8
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.01 E-value=2.4e-09 Score=99.94 Aligned_cols=138 Identities=16% Similarity=0.123 Sum_probs=85.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
.|||+|+.||||+|+..+ |++|||||.+|+... ...+...+..... +....+..+...++.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~--------g~~vavKv~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----- 65 (190)
T cd05145 3 GCISTGKEANVYHARTGD--------GEELAVKIYKTSTLS-FKDRDKYIEGDPR---FRSRYSKSNPRKLVFAW----- 65 (190)
T ss_pred ceeecCCCcEEEEEEcCC--------CCEEEEEEEEcCcce-EeeHHHHhcCCcc---cccccccCCHHHHHHHH-----
Confidence 689999999999999763 699999999999642 2222222211100 11111112333333322
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccch-hHHhhhchhhHHHHHHHHHHHHHHhh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKML 448 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~-~~~l~~~~~~~~~LA~~g~~aflkml 448 (455)
+..|.+|+.++.. +.+.+|.++ .+.+.+|||||++|..+... +............++..+++++..+-
T Consensus 66 ----~~~E~~~l~~l~~-----~~i~~p~~~--~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH 134 (190)
T cd05145 66 ----AEKEFRNLKRLYE-----AGVPVPEPI--LLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLY 134 (190)
T ss_pred ----HHHHHHHHHHHHh-----CCCCCceEE--EecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999998864 357778887 35678999999999754321 21111112234567888888876665
Q ss_pred hccCCCC
Q 012848 449 LVPYLNN 455 (455)
Q Consensus 449 f~dgFv~ 455 (455)
-+.|++|
T Consensus 135 ~~~givH 141 (190)
T cd05145 135 QEAGLVH 141 (190)
T ss_pred HhCCEec
Confidence 5588887
No 9
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.77 E-value=6.2e-08 Score=91.21 Aligned_cols=136 Identities=17% Similarity=0.169 Sum_probs=78.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
..||+|+.|+||+|+..+ |++|||||.+|+.......| ..+....++....+ ..++...++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~--------g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~---- 66 (190)
T cd05147 3 GCISTGKEANVYHATTAN--------GEERAIKIYKTSILVFKDRD-RYVSGEFRFRHGYC---KSNPRKMVRTWA---- 66 (190)
T ss_pred CccccccceEEEEEECCC--------CCEEEEEEEEecccccccHH-HhhcCCchhhcccc---CCCHHHHHHHHH----
Confidence 579999999999999863 69999999999865443333 11111111111111 123344443332
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHH--HHHHh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH--ALLKM 447 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~--aflkm 447 (455)
..|.+|+.++.. ..+..|.++ .+...+|||||++|..+.... +.......+.++..+.+ ..+.+
T Consensus 67 -----~~E~~~l~~l~~-----~~v~~p~~~--~~~~~~iVmE~i~g~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 67 -----EKEMRNLKRLVT-----AGIPCPEPI--LLKSHVLVMEFIGDDGWAAPR--LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred -----HHHHHHHHHHHH-----CCCCCCcEE--EecCCEEEEEEeCCCCCcchh--hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 479999998864 244456555 467779999999996544321 11111122334333322 34455
Q ss_pred hh-ccCCCC
Q 012848 448 LL-VPYLNN 455 (455)
Q Consensus 448 lf-~dgFv~ 455 (455)
++ ..|++|
T Consensus 133 l~H~~giiH 141 (190)
T cd05147 133 LYQDCRLVH 141 (190)
T ss_pred HHHhCCccc
Confidence 54 668887
No 10
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.39 E-value=2.6e-06 Score=77.90 Aligned_cols=131 Identities=20% Similarity=0.082 Sum_probs=78.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
++|++|+.|+||+|+..+ |++|||||.+|+.......+..++ ... .......++....
T Consensus 3 ~~lg~G~~g~Vy~a~~~~--------~~~vavKv~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~-------- 60 (187)
T cd05119 3 GPIGTGKEADVYLALDGD--------GEPVAVKIYRTGRTSFKKRKRYRT---GDY---RFGRKKSNWRYLS-------- 60 (187)
T ss_pred cccccccceeEEEEECCC--------CCEEEEEEEecCccchhhhhhhhH---HHH---HhccCCcchhhhh--------
Confidence 579999999999998753 689999999998765444333222 011 1111111111111
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccC-----ccccchhHHhhhchhhHHHHHHHHHHHH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG-----ECVSRYVDELQGHERLKSALAHIGTHAL 444 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G-----~~i~~~~~~l~~~~~~~~~LA~~g~~af 444 (455)
+.....|..++.+.... .+.+|+++ .+...+|+|||++| ..+.+... . .....++..++.+.
T Consensus 61 -~~~~~~e~~~l~~l~~~-----~~~~~~~~--~~~~~~lv~e~~~g~~~~~~~l~~~~~----~-~~~~~~~~~~~~~l 127 (187)
T cd05119 61 -RLWAEKEFRNLKRLYEA-----GVPVPKPI--DLNRHVLVMEFIGGDGIPAPRLKDVRL----L-EDPEELYDQILELM 127 (187)
T ss_pred -hHHHHHHHHHHHHHHHc-----CCCCCceE--ecCCCEEEEEEeCCCCccChhhhhhhh----c-ccHHHHHHHHHHHH
Confidence 12234556666666442 36688887 46778999999999 44443321 1 22356666666666
Q ss_pred HHhhhccCCCC
Q 012848 445 LKMLLVPYLNN 455 (455)
Q Consensus 445 lkmlf~dgFv~ 455 (455)
..+.-..|++|
T Consensus 128 ~~lh~~~~ivH 138 (187)
T cd05119 128 RKLYREAGLVH 138 (187)
T ss_pred HHHhhccCcCc
Confidence 65554477777
No 11
>smart00090 RIO RIO-like kinase.
Probab=98.24 E-value=7e-06 Score=80.14 Aligned_cols=133 Identities=21% Similarity=0.129 Sum_probs=80.2
Q ss_pred ccccccCcceEEEeE--ecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccC--ccccCHHHHHHHHH
Q 012848 290 APVASGSIAQVHRAS--LRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA--VKWLRLDESVQQFA 365 (455)
Q Consensus 290 ~PiASASIAQVHrA~--Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~--l~~l~l~e~v~ef~ 365 (455)
+++|.|+.||||+|+ .++ |++||||+.+++....-..+.. ....+. +...+..+.+
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~--------g~~vaiK~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~---- 93 (237)
T smart00090 34 GCISTGKEANVYHALDFDGS--------GKERAVKIYRTGTLEFKRRDRY--------VDGDFRFKYRKINPRKLV---- 93 (237)
T ss_pred CeeccCcceeEEEEEecCCC--------CcEEEEEEEEcCcceecchhhh--------cccchhhccCCCCHHHHH----
Confidence 589999999999998 433 6999999999976542221110 000000 0111111211
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchh-HHhhhchhhHHHHHHHHHHHH
Q 012848 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV-DELQGHERLKSALAHIGTHAL 444 (455)
Q Consensus 366 ~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~-~~l~~~~~~~~~LA~~g~~af 444 (455)
+..+..|+.++.++... .+.+|+++. .+..+|||||++|..+.+.. ............++..++. .
T Consensus 94 -----~~~~~~E~~~L~~L~~~-----~i~~p~~~~--~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~-~ 160 (237)
T smart00090 94 -----RLWAEKEFRNLQRLYEA-----GVPVPKPIA--WRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILE-E 160 (237)
T ss_pred -----HHHHHHHHHHHHHHHhc-----CCCCCeeeE--ecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHH-H
Confidence 12468899999998642 567888874 35679999999998776542 1111111112355655554 3
Q ss_pred HHhhhccC-CCC
Q 012848 445 LKMLLVPY-LNN 455 (455)
Q Consensus 445 lkmlf~dg-Fv~ 455 (455)
+..+...| ++|
T Consensus 161 l~~LH~~g~iiH 172 (237)
T smart00090 161 MRKLYKEGELVH 172 (237)
T ss_pred HHHHHhcCCEEe
Confidence 66677777 776
No 12
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.08 E-value=1.2e-05 Score=76.47 Aligned_cols=127 Identities=24% Similarity=0.133 Sum_probs=72.4
Q ss_pred EEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHH
Q 012848 300 VHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379 (455)
Q Consensus 300 VHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~ 379 (455)
||.|.-.+ |++||||+=+.+.. .++. .+ +-...-+.+....-... .....+.--++|++
T Consensus 2 Vy~~~~~~--------~~~~a~K~~r~~~~-~Fk~----~~---~y~~~~~r~~~~~~~~~-----~~~~~~~~~~~E~~ 60 (188)
T PF01163_consen 2 VYHAIDPD--------GEEVAVKIYRTGRT-SFKR----RK---KYRDYDYRFKKYRHKSS-----WRYLIREWAKKEFR 60 (188)
T ss_dssp EEEEEECT--------TEEEEEEEE-S----SS-H----HH---HHTTTSTTSTTC--G-------CHHHHHHHHHHHHH
T ss_pred EEEEECCC--------CCEEEEEEeccCce-EEEE----ee---eeecccchhcccccccC-----HHHHHHHHHHHHHH
Confidence 77777643 69999999998843 3333 11 11111121110000000 00111234477999
Q ss_pred HHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeeccc--CccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQ--GECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 380 nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~--G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
||.++.+ ..|.+|+|+ ..++++||||||+ |.++.++.+. .-.....+.+...+++...+|+-..|+||
T Consensus 61 ~L~~l~~-----~Gv~vP~p~--~~~~~~ivME~I~~~G~~~~~l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givH 130 (188)
T PF01163_consen 61 NLKRLYE-----AGVPVPKPY--DYNRNVIVMEYIGEDGVPLPRLKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVH 130 (188)
T ss_dssp HHHHCCC-----TT-SS--EE--EEETTEEEEE--EETTEEGGCHHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHH-----CCccCCcEE--EEeCCEEEEEecCCCccchhhHHhc-cccchhHHHHHHHHHHHHHHHHHhcCcee
Confidence 9987653 468999999 6789999999999 9999886433 21133467788888888888887888877
No 13
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.91 E-value=6.7e-05 Score=70.07 Aligned_cols=127 Identities=15% Similarity=0.064 Sum_probs=76.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccc--hHhHHHHHHHHHHHHccccCccccCHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES--IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~--i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~ 366 (455)
.++|+.|+.|+||+|..++ |+.||||+.+++.... +..+-. ..+.. ...+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~----- 73 (198)
T cd05144 20 GNQIGVGKESDVYLALDPD--------GNPVALKFHRLGRTSFRKVKRKRD----------YLGDR---KHASWL----- 73 (198)
T ss_pred CCccccCcceEEEEEEcCC--------CCEEEEEEEecccchhhhhcchHH----------HHhcc---ccchhH-----
Confidence 5889999999999998864 6999999988764211 010100 00000 001111
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHH
Q 012848 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446 (455)
Q Consensus 367 ~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflk 446 (455)
-..+.++..|...+..+... .+.+|+++. ..+..+||||++|.++.+.... .....++..+.++. .
T Consensus 74 -~~~~~~~~~E~~~l~~l~~~-----~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l-~ 139 (198)
T cd05144 74 -YLSRLAAQKEFAALKALYEE-----GFPVPKPID--WNRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEI-V 139 (198)
T ss_pred -HHhHHHHHHHHHHHHHHHHc-----CCCCCceee--cCCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHH-H
Confidence 11223456677777666432 356787774 4667999999999988765321 12345666665544 4
Q ss_pred hhhccCCCC
Q 012848 447 MLLVPYLNN 455 (455)
Q Consensus 447 mlf~dgFv~ 455 (455)
.+...|++|
T Consensus 140 ~lh~~gi~H 148 (198)
T cd05144 140 KAYKHGIIH 148 (198)
T ss_pred HHHHCCCCc
Confidence 556688887
No 14
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.90 E-value=8.2e-05 Score=69.30 Aligned_cols=117 Identities=18% Similarity=0.119 Sum_probs=77.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
++|+.|+-|.||+|+.. |.+|+||+..|.....-..|-. .
T Consensus 2 ~~l~~G~~~~vy~~~~~---------~~~~~vK~~~~~~~~~~~~~~~-------------------------------~ 41 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL---------GIKAVIKWRIPKRYRHPELDER-------------------------------I 41 (211)
T ss_pred cccccCceEEEEEEeeC---------CCceEEEEeCCcCCcChHHHHH-------------------------------H
Confidence 57899999999999872 5789999988764222111100 1
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf 449 (455)
...++.+|++++..... ..+.+|.++....+..+|+|||++|.++.+++..... ....++..+.. .+.++-
T Consensus 42 ~~~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~---~~~~i~~~i~~-~l~~lH 112 (211)
T PRK14879 42 RRERTRREARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM---EELELSREIGR-LVGKLH 112 (211)
T ss_pred HHHHHHHHHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH---HHHHHHHHHHH-HHHHHH
Confidence 12345777777776642 3577888886667889999999999999887643211 23345555444 455666
Q ss_pred ccCCCC
Q 012848 450 VPYLNN 455 (455)
Q Consensus 450 ~dgFv~ 455 (455)
..|++|
T Consensus 113 ~~~i~H 118 (211)
T PRK14879 113 SAGIIH 118 (211)
T ss_pred hCCccc
Confidence 777766
No 15
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.69 E-value=0.00018 Score=64.28 Aligned_cols=78 Identities=17% Similarity=0.139 Sum_probs=60.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
-+|++.|..++||+.+.. |++|+||+-+++..
T Consensus 3 ~~~l~~G~~~~vy~~~~~---------~~~~~lK~~~~~~~--------------------------------------- 34 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA---------NKKYVVRIPGNGTE--------------------------------------- 34 (170)
T ss_pred eeecCCcccCceEEEEEC---------CeEEEEEeCCCCcc---------------------------------------
Confidence 478999999999999863 47899998776531
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~ 421 (455)
...|+..|+++++.+.+. ..+|+++....+..+++|||++|.++.+
T Consensus 35 -~~~~~~~E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 35 -LLINRENEAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLT 80 (170)
T ss_pred -cccCHHHHHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccc
Confidence 124667888888877653 2378888766667899999999998875
No 16
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.65 E-value=0.00049 Score=68.65 Aligned_cols=134 Identities=19% Similarity=0.109 Sum_probs=81.6
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ 370 (455)
||.+|==|-||+|.-.+ |..|||||.+...-+.-+.+-.+... ..+-..+. +...++....
T Consensus 55 ~istGKEA~Vy~a~~~~--------~~~~avKiyr~~t~~fk~~~~Yi~gd-----~Rf~~~~~-~rr~lv~~W~----- 115 (268)
T COG1718 55 CISTGKEANVYLAETGD--------GRYVAVKIYRTSTSEFKRIRRYIQGD-----PRFRNSRS-NRRKLVFAWA----- 115 (268)
T ss_pred eecCCcceEEEeeccCC--------CceEEEEEEehhhhhhhhHHHHHhcC-----hhhhcCCC-CHHHHHHHHH-----
Confidence 77788888899998753 69999999998864433322221110 01111111 3344443332
Q ss_pred hcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCc--cccchhHHhhhchhhHHHHHHHHHHHHHHhh
Q 012848 371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE--CVSRYVDELQGHERLKSALAHIGTHALLKML 448 (455)
Q Consensus 371 ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~--~i~~~~~~l~~~~~~~~~LA~~g~~aflkml 448 (455)
+.|-+||.|..+ ..|.+|+|| .+-++||+||||... +--.+ ++..........+-...++-.-+|.
T Consensus 116 ----~kEf~NL~R~~e-----AGVrvP~Pi--~~~~nVLvMEfIg~~g~pAP~L-kDv~~e~~e~~~~~~~~v~~~~~l~ 183 (268)
T COG1718 116 ----RKEFRNLKRAYE-----AGVRVPEPI--AFRNNVLVMEFIGDDGLPAPRL-KDVPLELEEAEGLYEDVVEYMRRLY 183 (268)
T ss_pred ----HHHHHHHHHHHH-----cCCCCCCce--eecCCeEEEEeccCCCCCCCCc-ccCCcCchhHHHHHHHHHHHHHHHH
Confidence 678889998875 369999999 899999999999865 21111 1111111134455566666666666
Q ss_pred hccCCCC
Q 012848 449 LVPYLNN 455 (455)
Q Consensus 449 f~dgFv~ 455 (455)
-+-|+||
T Consensus 184 ~~a~LVH 190 (268)
T COG1718 184 KEAGLVH 190 (268)
T ss_pred HhcCccc
Confidence 6677777
No 17
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.31 E-value=0.0011 Score=61.16 Aligned_cols=112 Identities=21% Similarity=0.158 Sum_probs=69.2
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHh
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~E 371 (455)
|+.|+-|.||+|... |.+|+||+..+.....=. ++.. .+.
T Consensus 2 ig~G~~~~vy~~~~~---------~~~~viK~~~~~~~~~~~-----------------------~~~~--------~~~ 41 (199)
T TIGR03724 2 IAKGAEAIIYLGDFL---------GLKAVIKERVPKSYRHPE-----------------------LDER--------IRR 41 (199)
T ss_pred CCCCceEEEEEeecC---------CccEEEEEecCCcCcCch-----------------------HHHH--------HHH
Confidence 678999999999852 589999997664311100 0100 011
Q ss_pred cCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhcc
Q 012848 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVP 451 (455)
Q Consensus 372 LDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~d 451 (455)
-.+.+|.+++.++.. ..+.+|.++.......+|+|||++|.++.+++.. ... .++..+.. .+..+...
T Consensus 42 ~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~---~~~---~~~~~i~~-~l~~lH~~ 109 (199)
T TIGR03724 42 ERTRNEARLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE---GND---ELLREIGR-LVGKLHKA 109 (199)
T ss_pred HHHHHHHHHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh---cHH---HHHHHHHH-HHHHHHHC
Confidence 234667777776653 3577888886556667999999999998876432 110 34443333 33445666
Q ss_pred CCCC
Q 012848 452 YLNN 455 (455)
Q Consensus 452 gFv~ 455 (455)
|++|
T Consensus 110 gi~H 113 (199)
T TIGR03724 110 GIVH 113 (199)
T ss_pred Ceec
Confidence 6665
No 18
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.25 E-value=0.0015 Score=57.79 Aligned_cols=111 Identities=18% Similarity=0.055 Sum_probs=68.1
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHh
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~E 371 (455)
|++|+.|+||+++..+ .|++++||+.+++-... .+
T Consensus 1 l~~g~~~~v~~~~~~~-------~~~~~~~K~~~~~~~~~--------------------------------------~~ 35 (215)
T cd00180 1 LGEGGFGTVYLARDKK-------TGKKVAIKIIKKEDSSS--------------------------------------LL 35 (215)
T ss_pred CCcCCceEEEEEEecC-------CCcEEEEEEeccccchh--------------------------------------HH
Confidence 5789999999999964 26999999988875433 11
Q ss_pred cCHHHHHHHHHHHHHHhCCCCCeEeCcccCC--CCCCCeEEeecccCccccchhHHh--hhchhhHHHHHHHHHHHHHHh
Q 012848 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALLKM 447 (455)
Q Consensus 372 LDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~--lst~rVLVmE~i~G~~i~~~~~~l--~~~~~~~~~LA~~g~~aflkm 447 (455)
-++.+|.+.+.++.. ..+|+++.- ......++|||++|.++.++++.. .........++..+++++ +.
T Consensus 36 ~~~~~e~~~~~~l~~-------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~ 107 (215)
T cd00180 36 EELLREIEILKKLNH-------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGL-EY 107 (215)
T ss_pred HHHHHHHHHHHhcCC-------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHH-HH
Confidence 123445544544432 334444432 235789999999999998876542 112222344555555544 34
Q ss_pred hhccCCCC
Q 012848 448 LLVPYLNN 455 (455)
Q Consensus 448 lf~dgFv~ 455 (455)
+-..|++|
T Consensus 108 lh~~~~~H 115 (215)
T cd00180 108 LHSNGIIH 115 (215)
T ss_pred HHhCCeec
Confidence 44556665
No 19
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=97.20 E-value=0.0016 Score=64.07 Aligned_cols=115 Identities=10% Similarity=0.011 Sum_probs=73.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.++++.+--|+|+.+.. + +.++|||+-+|..... +-.+.+ +
T Consensus 36 ~~~l~~~~f~~v~l~~~-~--------~~~~iiKvf~~~~~~~---~~~~~~-------f-------------------- 76 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-D--------YGKYILKVFAPKVKRT---ERFLKS-------F-------------------- 76 (232)
T ss_pred EEEecCCCceEEEEEec-C--------CCcEEEEEechhcCch---HHHHHh-------h--------------------
Confidence 47888999999997543 1 4689999999986422 100000 0
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCccc--------CCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--------YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~--------~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g 440 (455)
...==|++||+++.++.+. .+..|..+ ..+++..+|+|||++|.++.++.+ . . ..+.. .
T Consensus 77 ~~g~~~e~Ea~~l~rL~~~-----GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-~--~----~~~~~-~ 143 (232)
T PRK10359 77 VKGDYYENLIVQTDRVRSE-----GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-I--S----EDVKA-K 143 (232)
T ss_pred hhhHHHHHHHHHHHHHHHC-----CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-c--c----HHHHH-H
Confidence 0000147899999988532 33333333 124788999999999999987632 1 1 12222 3
Q ss_pred HHHHHHhhhccCCCC
Q 012848 441 THALLKMLLVPYLNN 455 (455)
Q Consensus 441 ~~aflkmlf~dgFv~ 455 (455)
+-..++++..+|++|
T Consensus 144 i~~~l~~lH~~gi~H 158 (232)
T PRK10359 144 IKASIESLHQHGMVS 158 (232)
T ss_pred HHHHHHHHHHcCCcc
Confidence 334589999999998
No 20
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.09 E-value=0.005 Score=59.18 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=76.4
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCcc----ccCHHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK----WLRLDESVQQFAV 366 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~----~l~l~e~v~ef~~ 366 (455)
+|++|==|=||.|.-.++.. ....+.+|||||=+.+..+-=. .+ ....--|.++ +.+...++...
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~-~~~~~~~~avKi~r~~~~~Fk~-----~~---~y~~~~~rf~~~~~k~~~~~~~~~w-- 72 (197)
T cd05146 4 CISTGKESVVLHANGGSNET-EQVIPTECAIKVFKTTLNEFKN-----RD---KYIKDDYRFKDRFSKLNPRKIIRMW-- 72 (197)
T ss_pred ccccCcceEEEEEecCcccc-cccCCceEEEEEEeccceeEcC-----hh---hhccCCcccccCcCCCCHHHHHHHH--
Confidence 45666667789887432100 0113589999999866432211 11 1110001111 12233333222
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc-hhHHhhhchhhHHHHHHHHHHHHH
Q 012848 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR-YVDELQGHERLKSALAHIGTHALL 445 (455)
Q Consensus 367 ~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~-~~~~l~~~~~~~~~LA~~g~~afl 445 (455)
=+.|++|+.++.+. .+.+|+|+ .+.+++|||||+.|..+.. .+....-.......+....+.+..
T Consensus 73 -------a~kE~r~L~rl~~~-----Gv~vP~pi--~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~ 138 (197)
T cd05146 73 -------AEKEMHNLKRMQKA-----GIPCPEVV--VLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMK 138 (197)
T ss_pred -------HHHHHHHHHHHHHc-----CCCCCeEE--EecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHH
Confidence 26899999998764 68899999 5799999999999842211 011111011112344555556665
Q ss_pred HhhhccCCCC
Q 012848 446 KMLLVPYLNN 455 (455)
Q Consensus 446 kmlf~dgFv~ 455 (455)
+|+-..|+||
T Consensus 139 ~l~H~~glVH 148 (197)
T cd05146 139 QLYKECNLVH 148 (197)
T ss_pred HHHHhCCeec
Confidence 6655778877
No 21
>PRK10593 hypothetical protein; Provisional
Probab=97.04 E-value=0.0038 Score=62.96 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHH
Q 012848 266 AYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKI 345 (455)
Q Consensus 266 ~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l 345 (455)
+.+++.+++.+|..+.+ .+||+.|.++|||+-...+ ..+.||+.+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~~~---------~~~~~k~~~~~~~---------------- 50 (297)
T PRK10593 2 EQLRAELSHLLGEKLSR------VECISEQPYAALWALYDSQ---------GNPMPLMARSFST---------------- 50 (297)
T ss_pred hHHHHHHHHHhchhhhe------eeecCCccceeEEEEEcCC---------CCEEEEEeccccc----------------
Confidence 45778888888874433 6899999999999987643 3588898543210
Q ss_pred HccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccC-----CCCCCCeEEeecccCcccc
Q 012848 346 SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-----PLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 346 ~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~-----~lst~rVLVmE~i~G~~i~ 420 (455)
.+ .+..||++++...+ ...|.||+|+. ...+...|||||++|.++.
T Consensus 51 ------------~~-------------~~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~ 101 (297)
T PRK10593 51 ------------PG-------------VAQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVE 101 (297)
T ss_pred ------------ch-------------HHHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecC
Confidence 00 23789999987754 23589999994 1235689999999999887
Q ss_pred c
Q 012848 421 R 421 (455)
Q Consensus 421 ~ 421 (455)
+
T Consensus 102 ~ 102 (297)
T PRK10593 102 A 102 (297)
T ss_pred C
Confidence 5
No 22
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=96.69 E-value=0.0074 Score=56.81 Aligned_cols=84 Identities=17% Similarity=0.246 Sum_probs=52.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
++|+.|+.|+||+|++.+ ++.||+|+.+++.....
T Consensus 1 ~~ig~g~~g~vy~~~~~~--------~~~~a~K~~~~~~~~~~------------------------------------- 35 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKD--------KTPVAVKTCKEDLPQEL------------------------------------- 35 (250)
T ss_pred CccCCCCCceEEEEEecC--------CcEEEEEecCCcCCHHH-------------------------------------
Confidence 478999999999999754 58999998776543111
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD 424 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~ 424 (455)
+.++.+|+..+.++ +.+++.-+.-+........++|||++|.++.++..
T Consensus 36 -~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 84 (250)
T cd05085 36 -KIKFLSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLR 84 (250)
T ss_pred -HHHHHHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHH
Confidence 11345555555543 12222111111223345789999999999887654
No 23
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.52 E-value=0.0073 Score=59.37 Aligned_cols=45 Identities=24% Similarity=0.241 Sum_probs=32.6
Q ss_pred HHHhCCChHhhcccccc-------ccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 273 ERAFGRRLSEIFDGFEE-------APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 273 e~elG~~~~eiF~~fd~-------~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
++|+|.+.+-++...++ ..++.|+-|+||+|+.+.+ |+.||||+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~-------~~~v~iK~~ 53 (292)
T cd06657 2 HEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSS-------GKLVAVKKM 53 (292)
T ss_pred hhHhhhhceEeecCCChHHHhhhHHHcCCCCCeEEEEEEEcCC-------CeEEEEEEe
Confidence 35555555545544444 4599999999999999752 699999964
No 24
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.42 E-value=0.014 Score=53.90 Aligned_cols=85 Identities=18% Similarity=0.099 Sum_probs=60.0
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHH
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~ 367 (455)
|-+|++.|..++||+.+..+ |++++||+-+++-..
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~--------g~~~ilK~~~~~~~~------------------------------------- 36 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGG--------GRRLVLRRPPPGALL------------------------------------- 36 (223)
T ss_pred cceecCCCccceEEEEEecC--------CcceEEEeCCCcccC-------------------------------------
Confidence 45799999999999998853 589999986655210
Q ss_pred HHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCC-----CCeEEeecccCccccchh
Q 012848 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH-----PAVLVETYEQGECVSRYV 423 (455)
Q Consensus 368 l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst-----~rVLVmE~i~G~~i~~~~ 423 (455)
...-++..|++.++.+++. .+.+|+++.-... ...++|||++|.++.+..
T Consensus 37 -~~~~~~~~E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~ 91 (223)
T cd05154 37 -PSAHDVAREYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL 91 (223)
T ss_pred -cccccHHHHHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence 0013557788888776543 4668887643222 348999999999988753
No 25
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.35 E-value=0.024 Score=54.35 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=25.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|..|+||+|+...+ |+.||||+.+.+
T Consensus 7 ~~l~~g~~g~v~~~~~~~~-------~~~~~iK~~~~~ 37 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPT-------GRVVALKIINLD 37 (277)
T ss_pred hheeccCCceEEEEEEcCC-------CcEEEEEEecCC
Confidence 5789999999999998642 689999987554
No 26
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.23 E-value=0.028 Score=51.24 Aligned_cols=85 Identities=22% Similarity=0.259 Sum_probs=54.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+++++++.|+||+|+..+. |+.|+||+.+.+... .
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~----------------------------~--------- 39 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGT-------GELVAVKVLKKEKTE----------------------------K--------- 39 (225)
T ss_pred eeEeecCCCeEEEEEEEcCC-------CcEEEEEeeccccch----------------------------H---------
Confidence 36899999999999999752 589999998776432 0
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCccc--CCCCCCCeEEeecccCccccchhHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~--~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
..-++.+|.+.+.++ + .++ +++++ ........+++||.+|.++.++.+.
T Consensus 40 -~~~~~~~e~~~~~~~----~-~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 90 (225)
T smart00221 40 -QREEFLREIRILKKL----K-HPN--IVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRK 90 (225)
T ss_pred -HHHHHHHHHHHHHhC----C-CCC--hhhheeeeecCCceEEEEeccCCCCHHHHHHh
Confidence 001334444444444 1 111 22222 1223667899999999988877654
No 27
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=96.22 E-value=0.033 Score=47.14 Aligned_cols=79 Identities=16% Similarity=0.115 Sum_probs=56.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.++++.|+.+.||+++.. +..++||+..++..
T Consensus 3 ~~~i~~g~~~~v~~~~~~---------~~~~~iK~~~~~~~--------------------------------------- 34 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK---------DEDYVLKINPSREK--------------------------------------- 34 (155)
T ss_pred ceecccccccceEEEEec---------CCeEEEEecCCCCc---------------------------------------
Confidence 467899999999999984 36899998776632
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCC--CCCeEEeecccCccccch
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRY 422 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~ls--t~rVLVmE~i~G~~i~~~ 422 (455)
+.++..|...++++.+. ...+|+++.... ....++|||++|.++.++
T Consensus 35 --~~~~~~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~ 83 (155)
T cd05120 35 --GADREREVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV 83 (155)
T ss_pred --hhHHHHHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC
Confidence 12346666666666654 345676654322 368999999999988754
No 28
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=95.99 E-value=0.052 Score=51.85 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=29.6
Q ss_pred ccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 284 F~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
|..+..+++|.|+.|+||+|+.+.+ |+.||||..+.
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~-------~~~~a~K~~~~ 36 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTT-------GEMMAVKQVEL 36 (272)
T ss_pred CceeecceecccCceEEEEEeecCC-------Cceeeeeeeec
Confidence 4567789999999999999997642 68999997654
No 29
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=95.94 E-value=0.013 Score=57.57 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=40.6
Q ss_pred eEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 394 V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
+..-+..+.+++..||+|||+||++++++.+ + .+.++..+.+ .+++|..+||+|
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-i------~e~~~~ki~~-~ikqlH~~G~~H 158 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED-I------DEDLAEKIVE-AIKQLHKHGFYH 158 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh-c------CHHHHHHHHH-HHHHHHHcCCcc
Confidence 4444556788999999999999999998642 1 2245555554 589999999998
No 30
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=95.88 E-value=0.04 Score=53.02 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=28.5
Q ss_pred hHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 280 ~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.+.|..+ +.|++|..|+||+|+...+ |+.||||+...
T Consensus 2 ~~~~y~~~--~~l~~g~~~~vy~~~~~~~-------~~~vaiK~~~~ 39 (277)
T cd06642 2 PEELFTKL--ERIGKGSFGEVYKGIDNRT-------KEVVAIKIIDL 39 (277)
T ss_pred hHHHHHHH--HHhcCCCCeeEEEEEEcCC-------CeEEEEEEecc
Confidence 34555533 5689999999999998652 68999998643
No 31
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=95.69 E-value=0.035 Score=58.61 Aligned_cols=24 Identities=33% Similarity=0.362 Sum_probs=22.4
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEE
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVK 322 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVK 322 (455)
||.||-|=||+|+.+.. |.+||||
T Consensus 18 iG~GsfavVykg~h~~~-------~~~VAIK 41 (429)
T KOG0595|consen 18 IGSGSFAVVYKGRHKKS-------GTEVAIK 41 (429)
T ss_pred ccCcceEEEEEeEeccC-------CceEEee
Confidence 99999999999999873 6999999
No 32
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=95.68 E-value=0.044 Score=53.79 Aligned_cols=116 Identities=11% Similarity=0.011 Sum_probs=64.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.++.|+.|.||+|+.+.. ++.|+||+..++.. . .....+
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~-------~~~v~ik~~~~~~~-------~-------------------~~~~~~------ 46 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKET-------RQRFAMKKINKQNL-------I-------------------LRNQIQ------ 46 (305)
T ss_pred eeEeecCCCeeEEEEEECCC-------CcEEEEEEeehhhh-------h-------------------hHHHHH------
Confidence 46789999999999998752 68999997544310 0 000000
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCC--eEEeecccCccccchhHHhhh-chhhHHHHHHHHHHHHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA--VLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL 445 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~r--VLVmE~i~G~~i~~~~~~l~~-~~~~~~~LA~~g~~afl 445 (455)
++.+|...+.+. +.+ .+++++..++++. +|||||++|..+.+++..... .......++..++. -+
T Consensus 47 ----~~~~e~~~l~~~-----~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~-~l 114 (305)
T cd05609 47 ----QVFVERDILTFA-----ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVL-AL 114 (305)
T ss_pred ----HHHHHHHHHHhC-----CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHH-HH
Confidence 223344333322 122 3455665556665 899999999988877643111 11112223333333 23
Q ss_pred HhhhccCCCC
Q 012848 446 KMLLVPYLNN 455 (455)
Q Consensus 446 kmlf~dgFv~ 455 (455)
+-|...|++|
T Consensus 115 ~~lH~~~i~H 124 (305)
T cd05609 115 EYLHNYGIVH 124 (305)
T ss_pred HHHHHCCccc
Confidence 4455677776
No 33
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=95.60 E-value=0.11 Score=49.11 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=25.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.|+.|+.|+||+|+.+.+ |+.||||+.+..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~-------~~~~a~k~~~~~ 31 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRAD-------NTPVAVKSCRET 31 (252)
T ss_pred CccCcccCccEEEEEEecC-------CceEEEEecCcc
Confidence 4689999999999999752 689999986544
No 34
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=95.56 E-value=0.11 Score=52.89 Aligned_cols=132 Identities=19% Similarity=0.140 Sum_probs=77.0
Q ss_pred ccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHH
Q 012848 286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA 365 (455)
Q Consensus 286 ~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~ 365 (455)
.+- ++||.|==+-||.|...+ |.+||||.-|-| +..++.=-..-.. +.+.- ...|+.+.-...
T Consensus 94 ~iG-~~IGvGKEsdVY~~~~~~--------g~~~~vKfHR~G-rtsFrkvk~~R~y---~~~~~-h~sWl~~sRl~A--- 156 (304)
T COG0478 94 AIG-TKIGVGKESDVYVAIDPK--------GRKVAVKFHRLG-RTSFRKVKRNRDY---LADKE-HGSWLYVSRLAA--- 156 (304)
T ss_pred hhc-cccccCccceEEEEECCC--------CCEEEEEEeecC-chhhhhhcchhhh---hcccc-CcchhhhHHHHH---
Confidence 344 889999999999998864 799999999988 3333221111111 11111 123443322111
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHH
Q 012848 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445 (455)
Q Consensus 366 ~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~afl 445 (455)
.+|-..|.++. ...+.||+|+ --++++.|||+++|.++.+.-. .....+++...+++.+-
T Consensus 157 ---------~rEf~~L~~L~-----~~G~~VP~P~--~~nRHaVvMe~ieG~eL~~~r~----~~en~~~il~~il~~~~ 216 (304)
T COG0478 157 ---------EREFEALQRLY-----PEGVKVPKPI--AWNRHAVVMEYIEGVELYRLRL----DVENPDEILDKILEEVR 216 (304)
T ss_pred ---------HHHHHHHHHhh-----hcCCCCCCcc--ccccceeeeehcccceeecccC----cccCHHHHHHHHHHHHH
Confidence 22333333332 2468999999 5789999999999999987521 11224556655555433
Q ss_pred HhhhccCCCC
Q 012848 446 KMLLVPYLNN 455 (455)
Q Consensus 446 kmlf~dgFv~ 455 (455)
+- .+-|.||
T Consensus 217 ~~-~~~GiVH 225 (304)
T COG0478 217 KA-YRRGIVH 225 (304)
T ss_pred HH-HHcCccc
Confidence 33 3666665
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=95.56 E-value=0.072 Score=52.15 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=28.3
Q ss_pred cccccccCcceEEEeEecccCC---------CCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYP---------GQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~---------G~~~~G~~VAVKVqrPgV 328 (455)
.+.||.|+.|.||+|+..++.+ -....+..||||+.+++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~ 58 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA 58 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC
Confidence 4679999999999998754210 001235689999998864
No 36
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=95.53 E-value=0.062 Score=58.36 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=72.1
Q ss_pred cccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHH
Q 012848 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366 (455)
Q Consensus 287 fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~ 366 (455)
...+.||.|+-|.||+|+.. ++.+++|+..+.....- ++ ++.
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~---------~~~~v~k~~~~~~~~~~--~~---------------------~~~------ 377 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYL---------GRDAVIKERVPKGYRHP--EL---------------------DER------ 377 (535)
T ss_pred CccceeccCCcEEEEEEeec---------CccceeEEEecccccch--hH---------------------HHH------
Confidence 34688999999999999874 35677787655321110 00 000
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHH
Q 012848 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446 (455)
Q Consensus 367 ~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflk 446 (455)
...-.+.+|++.+.++. .+.+..|.++..-..+.+|||||++|.++.+++.. ...++..+.+ .+.
T Consensus 378 --~~~~~~~~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~-------~~~~~~~i~~-~L~ 442 (535)
T PRK09605 378 --LRTERTRAEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEG-------NPELVRKVGE-IVA 442 (535)
T ss_pred --HHHHHHHHHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHH-------HHHHHHHHHH-HHH
Confidence 00113567888887764 24566676665445678999999999999876531 2334444443 345
Q ss_pred hhhccCCCC
Q 012848 447 MLLVPYLNN 455 (455)
Q Consensus 447 mlf~dgFv~ 455 (455)
.+-..|++|
T Consensus 443 ~lH~~giiH 451 (535)
T PRK09605 443 KLHKAGIVH 451 (535)
T ss_pred HHHhCCCcc
Confidence 566677776
No 37
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=95.45 E-value=0.052 Score=54.30 Aligned_cols=48 Identities=23% Similarity=0.210 Sum_probs=35.6
Q ss_pred HHHhCCChHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 273 ERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 273 e~elG~~~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++|+++...++.+.+. .++||.|+.|+||+|+.... |+.||||+....
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~ 51 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRL-------RQKVAVKKLSRP 51 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCC-------CCEEEEEEeCch
Confidence 4566655555555554 48999999999999997652 689999987644
No 38
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=95.37 E-value=0.073 Score=55.65 Aligned_cols=79 Identities=32% Similarity=0.379 Sum_probs=55.5
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeE-EEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHH
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIV-VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~-VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ 370 (455)
+|+|+-|+||+|+.+ |+. ||||+..+.-.. ++.
T Consensus 49 iG~G~~g~V~~~~~~---------g~~~vavK~~~~~~~~---------------------------~~~---------- 82 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWR---------GTDVVAVKIISDPDFD---------------------------DES---------- 82 (362)
T ss_pred cccCCceeEEEEEeC---------CceeEEEEEecchhcC---------------------------hHH----------
Confidence 999999999999996 467 999987765210 000
Q ss_pred hcCHHHHHHHHHHHHHHhCCCCC-eEeCcccCCCCCC----CeEEeecccCccccchhHH
Q 012848 371 QVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHP----AVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 371 ELDfr~EA~nl~rf~~~f~~~~~-V~vP~~~~~lst~----rVLVmE~i~G~~i~~~~~~ 425 (455)
+-+|++|+.-+.+. ++++ |.|. ..|++ -.+||||++|-++.+++..
T Consensus 83 ~~~f~~E~~il~~l-----~HpNIV~f~----G~~~~~~~~~~iVtEy~~~GsL~~~l~~ 133 (362)
T KOG0192|consen 83 RKAFRREASLLSRL-----RHPNIVQFY----GACTSPPGSLCIVTEYMPGGSLSVLLHK 133 (362)
T ss_pred HHHHHHHHHHHHhC-----CCCCeeeEE----EEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence 34668888888762 2344 3443 34444 3699999999999988744
No 39
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.35 E-value=0.13 Score=49.78 Aligned_cols=46 Identities=24% Similarity=0.237 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 375 AREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 375 r~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
++||+.+.+.++. .|.+|.+|.=-.....+|||||+|..+.|+++.
T Consensus 47 ~~Earil~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~ 92 (204)
T COG3642 47 RREARILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEE 92 (204)
T ss_pred HHHHHHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHh
Confidence 6799999988764 688888885556667799999999999987654
No 40
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=95.32 E-value=0.07 Score=51.41 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=28.1
Q ss_pred hHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 280 ~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
++++|..+. .|++|..|-||+|+.+. .|+.||||+.
T Consensus 2 ~~~~~~~~~--~ig~G~~~~vy~~~~~~-------~~~~~aiK~~ 37 (277)
T cd06641 2 PEELFTKLE--KIGKGSFGEVFKGIDNR-------TQKVVAIKII 37 (277)
T ss_pred HHHhhhhhe--eEeecCCeEEEEEEECC-------CCcEEEEEEe
Confidence 466776444 59999999999998764 2689999975
No 41
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.30 E-value=0.097 Score=52.88 Aligned_cols=31 Identities=23% Similarity=0.120 Sum_probs=26.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.||.|+-|.||+|+.+.+ |+.||||+.+.+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~ 110 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPT-------GRLYALKVIYGN 110 (353)
T ss_pred hhccCCCCeEEEEEEECCC-------CCEEEEEEEecC
Confidence 6799999999999998752 689999997654
No 42
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=95.23 E-value=0.098 Score=50.39 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=27.4
Q ss_pred HhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 281 ~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
++.|..+ +++++|..|+||+|+.+.. |+.||||+..
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~-------~~~vaiK~~~ 38 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRT-------QQVVAIKIID 38 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccC-------CEEEEEEEEe
Confidence 4444433 5699999999999998652 6899999863
No 43
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=95.23 E-value=0.066 Score=50.89 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=26.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+++++|+.|+||+|+.+.+ |++|||||..+
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~-------~~~~~ik~~~~ 36 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKET-------NKEYAIKILDK 36 (280)
T ss_pred eeeecCCCceEEEEEEEcCC-------CCEEEEEEech
Confidence 46899999999999999752 69999999765
No 44
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=95.17 E-value=0.1 Score=52.04 Aligned_cols=31 Identities=26% Similarity=0.180 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.||.|+.|+||+|+.++. |+.||||+...
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~-------~~~vaiK~~~~ 36 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDT-------GEIVALKRMKK 36 (333)
T ss_pred EEEEeecCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 46789999999999998752 68999998653
No 45
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=95.15 E-value=0.11 Score=49.13 Aligned_cols=31 Identities=23% Similarity=0.150 Sum_probs=25.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|+||+|...+ ++.+|||+...+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~--------~~~~~~k~~~~~ 39 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLE--------KRKVAIKTIREG 39 (256)
T ss_pred EeeecCcccceEEEEEEeC--------CCeEEEEECCCC
Confidence 4679999999999998864 478999987654
No 46
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=95.10 E-value=0.21 Score=46.36 Aligned_cols=33 Identities=21% Similarity=0.034 Sum_probs=27.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.++++.++.|+||+|+.+++ |+.|+||+.+..-
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~ 37 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDT-------GELMAVKSVELSG 37 (260)
T ss_pred eeEeeecCceEEEEEEECCC-------CcEEEEEEeeccc
Confidence 47899999999999998752 6899999887654
No 47
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=94.98 E-value=0.085 Score=49.50 Aligned_cols=32 Identities=22% Similarity=0.000 Sum_probs=26.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.++.|+||+|+.+.+ |+.|+||+....
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~-------~~~~~ik~~~~~ 36 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDD-------GDFFAVKEVSLA 36 (258)
T ss_pred cceeeecCCceEEEEEEcCC-------CcEEEEEEEEEc
Confidence 57899999999999998742 689999987543
No 48
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=94.96 E-value=0.14 Score=47.98 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=27.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.+|.|+.|+||+|+..+. + ...++.||+|+.+++.
T Consensus 5 ~~lg~g~~g~v~~~~~~~~--~-~~~~~~vaiK~~~~~~ 40 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGL--S-GEKEVEVAVKTLKEDA 40 (258)
T ss_pred ceeccCCCcceEEEEecCC--C-CCCCceEEEEEccCCC
Confidence 6789999999999999752 1 1235899999987763
No 49
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=94.93 E-value=0.18 Score=47.06 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=27.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.||.|+.|+||+|+..... ..+..|+||+.++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~----~~~~~~~ik~~~~~~ 35 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD----GKTTEVAVKTLKEDA 35 (262)
T ss_pred CccccCCceEEEEEEEecCC----CCCceEEeEeecccc
Confidence 46899999999999997521 125899999988764
No 50
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=94.87 E-value=0.15 Score=47.08 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=28.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.++++++..|+||+|+.+. +|+.|++|+.+++..
T Consensus 5 ~~~l~~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~ 38 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKR-------TGKEVAIKVIKLESK 38 (253)
T ss_pred eeeeccCCceEEEEEEECC-------CCcEEEEEEecccch
Confidence 4789999999999999975 268999999987643
No 51
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=94.86 E-value=0.35 Score=47.91 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=38.0
Q ss_pred HHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 270 ~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+...-++.++.+.|.. .++++.|+.|+||+|+.+++ |+.||||+...
T Consensus 13 ~~~~~~~~~~~~~~f~~--~~~lg~G~~~~v~~~~~~~~-------~~~valK~~~~ 60 (317)
T cd06635 13 EIAELFFKEDPEKLFTD--LREIGHGSFGAVYFARDVRT-------NEVVAIKKMSY 60 (317)
T ss_pred HHHHHhcCCCchhhhhh--hheeccCCCeEEEEEEEcCC-------CcEEEEEEEec
Confidence 45566678888888873 56799999999999998652 68999998643
No 52
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=94.81 E-value=0.14 Score=49.02 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=27.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|+-|+||+|+++.. + ..+..||+|+.+.+.
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~--~--~~~~~vaik~~~~~~ 45 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLP--S--KRELPVAIHTLRAGC 45 (266)
T ss_pred eeeecccCCCeEEEEEEecC--C--CceeeEEEEecCCCC
Confidence 35699999999999998642 1 236899999887653
No 53
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=94.79 E-value=0.11 Score=52.41 Aligned_cols=48 Identities=23% Similarity=0.188 Sum_probs=35.6
Q ss_pred HHHHhCCChHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 272 IERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 272 le~elG~~~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+++|++..+.++-..++ -++++.|.-|.||+|+.+. .|+.||||+.+.
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~ 50 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRR-------TGAKVAIKKLYR 50 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECC-------CCcEEEEEEecc
Confidence 45666666655555453 5789999999999999764 268999997654
No 54
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=94.76 E-value=0.2 Score=47.33 Aligned_cols=32 Identities=16% Similarity=-0.068 Sum_probs=26.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|+||+|+..++ |++||||+.++.
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~-------~~~~~lk~~~~~ 38 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDT-------GRELAVKQVPFD 38 (263)
T ss_pred cceecCCCceEEEEEEEcCC-------CcEEEEEEEeec
Confidence 57899999999999997652 689999986644
No 55
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=94.59 E-value=0.23 Score=46.76 Aligned_cols=30 Identities=23% Similarity=0.040 Sum_probs=25.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.++++.|..|+||+|...+ +|+.|+||+..
T Consensus 6 ~~~lg~g~~~~v~~~~~~~-------~~~~~~ik~~~ 35 (267)
T cd06610 6 IEVIGVGATAVVYAAICLP-------NNEKVAIKRID 35 (267)
T ss_pred eeeecCCCCeEEEEEEEcC-------CCcEEEEEEec
Confidence 4678999999999999865 26899999864
No 56
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=94.56 E-value=0.35 Score=51.44 Aligned_cols=113 Identities=20% Similarity=0.047 Sum_probs=69.6
Q ss_pred CCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHH
Q 012848 262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341 (455)
Q Consensus 262 p~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~ 341 (455)
++.-+.+..-+.+..|.-- --+..+-+|++.|-+.+||+.++.+ | ++.|+||...|.++.
T Consensus 6 ~l~~~~v~~yl~~~~~~~~--~~~~~~~~elggGn~N~VyrV~~~~---g----~~svIVKqa~p~~r~----------- 65 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLFD--PKALLTAREIGDGNLNLVFRVSDTE---G----GKSVIVKQALPYVRV----------- 65 (401)
T ss_pred eCCHhHHHHHHHHhcCCCC--CcccceeeEcCCCceEEEEEEEeCC---C----CeEEEEEecCccccc-----------
Confidence 3444555556644434210 0133556899999999999999864 2 368999988776531
Q ss_pred HHHHHccccCccc-cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCcccc
Q 012848 342 AAKISSVIPAVKW-LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 342 la~l~~~~P~l~~-l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~ 420 (455)
.+. .| +.++ . .+.|++.+..+.+. ....+|++|.--....+|||||+++.++.
T Consensus 66 -------~g~-~wpl~~e----R----------~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~~l 119 (401)
T PRK09550 66 -------VGE-SWPLTLD----R----------ARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHKIL 119 (401)
T ss_pred -------ccc-cccccHH----H----------HHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCccHH
Confidence 110 01 1111 1 15577777776643 33579999954445579999999986643
No 57
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=94.29 E-value=0.21 Score=51.23 Aligned_cols=29 Identities=17% Similarity=0.107 Sum_probs=24.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.||.|+.|+||+|+.+.+ |+.||||+.+
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~-------~~~~aiK~i~ 35 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDT-------HALYAMKTLR 35 (381)
T ss_pred EEEeecCCEEEEEEEECCC-------CCEEEEEEEE
Confidence 5689999999999998752 6899999876
No 58
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=94.25 E-value=0.22 Score=47.39 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=29.2
Q ss_pred ChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 279 ~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+++.+|+.. +.++.|+-|+||+|..++. ++.||||+..
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~-------~~~~aik~~~ 40 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKT-------GQLAAIKVMD 40 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCC-------CcEEEEEEEE
Confidence 455666533 5699999999999998752 6899999863
No 59
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=94.25 E-value=0.35 Score=45.06 Aligned_cols=32 Identities=16% Similarity=0.006 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+++++++.|+||+|+.++. |+.|+||...+.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~ 36 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLET-------GDFVAIKQISLE 36 (254)
T ss_pred eeEEcccCCeEEEEEEEcCC-------CcEEEEEEeccc
Confidence 47899999999999998752 689999987654
No 60
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=94.23 E-value=0.4 Score=45.41 Aligned_cols=29 Identities=28% Similarity=0.301 Sum_probs=24.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
++++.|+.|+||+|+.+.. |+.||||+.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~-------~~~vavK~~~ 30 (260)
T cd05611 2 KPISKGAFGSVYLAKKRST-------GDYFAIKVLK 30 (260)
T ss_pred ccCCcCCCeeEEEEEecCC-------CCeEEEEEec
Confidence 5789999999999998752 6899999865
No 61
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=94.23 E-value=0.26 Score=46.88 Aligned_cols=32 Identities=25% Similarity=0.174 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|+||+|+.+.+ |+.||||+.+..
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~-------~~~~aik~~~~~ 45 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHT-------GELAAVKIIKLE 45 (267)
T ss_pred hheeecCCCeEEEEEEECCC-------CeEEEEEEEecC
Confidence 46789999999999998652 689999998654
No 62
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=94.22 E-value=0.19 Score=45.83 Aligned_cols=27 Identities=26% Similarity=0.077 Sum_probs=21.7
Q ss_pred CcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 296 SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 296 SIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
+.|+||+|+.+. .|+.||+|+.+.+..
T Consensus 1 ~~g~v~~~~~~~-------~~~~~~~k~~~~~~~ 27 (244)
T smart00220 1 SFGKVYLARDKK-------TGKLVAIKVIKKEKI 27 (244)
T ss_pred CceEEEEEEECC-------CCcEEEEEEeccccc
Confidence 468999999974 268999999887653
No 63
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=94.17 E-value=0.64 Score=44.09 Aligned_cols=32 Identities=25% Similarity=0.088 Sum_probs=25.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
...++.|+.|+||+|+.... |+.||||+....
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~-------~~~~~~k~~~~~ 36 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASS-------GELMAVKQVELP 36 (267)
T ss_pred cceeecCCCeEEEEEEecCC-------CcEEEEEEecCC
Confidence 36789999999999997642 689999976544
No 64
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.15 E-value=0.21 Score=50.71 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHH
Q 012848 265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344 (455)
Q Consensus 265 ~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~ 344 (455)
|..+.+.|.+.+|.+.. --+.+|++.|+|.++++-+- + ++.+-||+..+.-...
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~~-~--------~~~~FvK~~~~~~~~~------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLDT-D--------GGSYFVKVNSESGRDM------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEET-T--------S-EEEEEEEEGGGCCH-------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEEC-C--------CccEEEEecChhhHHH-------------
Confidence 56789999999998631 12368999999999999772 1 5899999887432111
Q ss_pred HHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccC--CCCCCCeEEeecccCc
Q 012848 345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGE 417 (455)
Q Consensus 345 l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~--~lst~rVLVmE~i~G~ 417 (455)
|..||+.++.+.+ ...+.||+|+. ++.....|+|||++..
T Consensus 56 -----------------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 -----------------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp -----------------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred -----------------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3677878877654 34688999995 2345678999999987
No 65
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=94.13 E-value=0.52 Score=45.73 Aligned_cols=91 Identities=20% Similarity=0.227 Sum_probs=53.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.++.|+-|.||+|+.++...| ..+..||||+...... ..
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~--~~~~~vavK~~~~~~~---------------------------~~---------- 51 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKG--EAETRVAVKTVNESAS---------------------------LR---------- 51 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCC--CcceEEEEEECCCcCC---------------------------HH----------
Confidence 46799999999999987642222 1257899997543210 00
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCe-EeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V-~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
.+.++.+|...+.++. .+++ .+-..+ .-....+++|||++|.++.+++..
T Consensus 52 -~~~~~~~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 52 -ERIEFLNEASVMKGFT-----CHHVVRLLGVV-SKGQPTLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred -HHHHHHHHHHHHHhCC-----CCCeeeEEEEE-cCCCCcEEEEeCCCCCCHHHHHHH
Confidence 0112344544444332 1222 111111 234567999999999999988754
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=94.08 E-value=0.23 Score=49.64 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=26.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.+|.|+-|+||+|+.+.. |..||+|+.+.+.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~-------~~~~a~k~~~~~~ 42 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPS-------GLIMARKLIHLEI 42 (331)
T ss_pred EeecCCCCEEEEEEEECCC-------CcEEEEEEeeccc
Confidence 5799999999999998752 6899999987643
No 67
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=94.02 E-value=0.53 Score=45.00 Aligned_cols=84 Identities=17% Similarity=0.174 Sum_probs=51.0
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ 370 (455)
.|+.|+.|.||+|+..+. ..+..||+|..+.... ...
T Consensus 2 ~lg~G~~g~Vy~~~~~~~-----~~~~~~~~k~~~~~~~--------------------------------------~~~ 38 (269)
T cd05087 2 EIGNGWFGKVILGEVNSG-----YTPAQVVVKELRVSAS--------------------------------------VQE 38 (269)
T ss_pred cccccCCceEEEEEEcCC-----CCceEEEEEecCCCCC--------------------------------------hHH
Confidence 578999999999998642 1247899996533210 011
Q ss_pred hcCHHHHHHHHHHHHHHhCCCCCeEeCcccC--CCCCCCeEEeecccCccccchhH
Q 012848 371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVD 424 (455)
Q Consensus 371 ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~--~lst~rVLVmE~i~G~~i~~~~~ 424 (455)
+.++.+|...+.++. .+++ ++.+. .-.+...+||||++|.++.+++.
T Consensus 39 ~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 87 (269)
T cd05087 39 QMKFLEEAQPYRSLQ-----HSNL--LQCLGQCTEVTPYLLVMEFCPLGDLKGYLR 87 (269)
T ss_pred HHHHHHHHHHHHhCC-----CCCE--eeEEEEEcCCCCcEEEEECCCCCcHHHHHH
Confidence 234555665555442 2222 22221 22355789999999998887764
No 68
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=94.00 E-value=0.31 Score=46.30 Aligned_cols=111 Identities=17% Similarity=0.164 Sum_probs=63.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+.++.|+-|+||+|+..+ +..||+|..+++-.. ..
T Consensus 12 ~~ig~g~~~~v~~~~~~~--------~~~~~~k~~~~~~~~--------------------------~~----------- 46 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNG--------NTKVAVKTLKPGTMS--------------------------PE----------- 46 (260)
T ss_pred heeccccCceEEEEEecC--------CceeEEEEecCCCCC--------------------------HH-----------
Confidence 569999999999998754 578999998875210 00
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhc---hhhHHHHHHHHHHHHHH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLK 446 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~---~~~~~~LA~~g~~aflk 446 (455)
++.+|..-+.++ ++..-+.+.... ......++|||++|..+.+++...... ......++..++.++-
T Consensus 47 ---~~~~E~~~l~~l----~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~- 116 (260)
T cd05070 47 ---SFLEEAQIMKKL----RHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA- 116 (260)
T ss_pred ---HHHHHHHHHHhc----CCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-
Confidence 134454444433 222223333332 234568999999999888765431111 1112345555555443
Q ss_pred hhhccCCCC
Q 012848 447 MLLVPYLNN 455 (455)
Q Consensus 447 mlf~dgFv~ 455 (455)
.|-..|++|
T Consensus 117 ~lH~~~i~H 125 (260)
T cd05070 117 YIERMNYIH 125 (260)
T ss_pred HHHHCCccc
Confidence 334556665
No 69
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=93.99 E-value=0.34 Score=45.36 Aligned_cols=29 Identities=21% Similarity=0.246 Sum_probs=23.5
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+++|+.|+||+|+...+ |+.|++|+..+.
T Consensus 1 lg~g~~~~vy~~~~~~~-------~~~~~~k~~~~~ 29 (265)
T cd05579 1 ISKGAYGRVFLAKKKST-------GDIYAIKVIKKA 29 (265)
T ss_pred CCCCCceEEEEEEECCC-------CCEEEEEEecch
Confidence 57899999999998652 689999986553
No 70
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=93.94 E-value=0.37 Score=47.93 Aligned_cols=30 Identities=30% Similarity=0.280 Sum_probs=24.7
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.||.|+.|+||+|+.+.. |+.||||+..++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~ 31 (321)
T cd05591 2 VLGKGSFGKVMLAELKGT-------DEVYAIKVLKKD 31 (321)
T ss_pred ccccCCCeEEEEEEECCC-------CCEEEEEEEeHH
Confidence 478999999999998752 689999987543
No 71
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=93.86 E-value=0.33 Score=45.83 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++++.+.-|+||+|+.+.. |+.|++|+..+.
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~-------~~~~~~k~~~~~ 42 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKT-------GQLVAIKIMDII 42 (275)
T ss_pred eeeecCCCCeEEEEEEECCC-------CcEEEEEEEecC
Confidence 47899999999999998752 689999997654
No 72
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=93.82 E-value=0.3 Score=49.03 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=27.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|+-|+||+|+.+. .|+.||+|+.+..+
T Consensus 10 ~~~lg~g~~g~V~~~~~~~-------~~~~~a~k~~~~~~ 42 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKP-------SGLIMARKLIHLEI 42 (333)
T ss_pred eccccCCCCEEEEEEEECC-------CCcEEEEEEeeccc
Confidence 3578999999999999875 26899999887654
No 73
>PRK09188 serine/threonine protein kinase; Provisional
Probab=93.69 E-value=0.48 Score=49.67 Aligned_cols=84 Identities=19% Similarity=0.093 Sum_probs=54.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.||.|..|+||+|..+.. .|+.||||+..+.... .. .+..
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~------~~~~vAiK~~~~~~~~------------------------~~-~~~~------- 64 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGD------PGTARAVRRRVSEVPW------------------------WS-KPLA------- 64 (365)
T ss_pred ccEEeecCcEEEEEEEEcCC------CCeEEEEEEecccccc------------------------cc-cHHH-------
Confidence 57799999999999987641 2588999987543210 00 0000
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCcccc
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~ 420 (455)
+-.|.+|++.+.++. .+.+ +|+.+. .....|||||++|..+.
T Consensus 65 --~~~~~~E~~iL~~L~-----h~~i-v~~l~~--~~~~~LVmE~~~G~~L~ 106 (365)
T PRK09188 65 --RHLAAREIRALKTVR-----GIGV-VPQLLA--TGKDGLVRGWTEGVPLH 106 (365)
T ss_pred --HHHHHHHHHHHHhcc-----CCCC-CcEEEE--cCCcEEEEEccCCCCHH
Confidence 112577887777663 2232 555553 35679999999998875
No 74
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=93.69 E-value=0.4 Score=46.31 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=26.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++++.|..|+||+|+.+. .++.|++|+..+.
T Consensus 25 ~~l~~g~~~~v~~~~~~~-------~~~~~~iK~~~~~ 55 (286)
T cd06614 25 EKIGEGASGEVYKATDRA-------TGKEVAIKKMRLR 55 (286)
T ss_pred HhccCCCCeEEEEEEEcc-------CCcEEEEEEEecC
Confidence 689999999999999874 2589999987654
No 75
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=93.53 E-value=0.62 Score=44.26 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=24.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.|+.|+||+|+..+ |+.||||+....
T Consensus 5 ~~~ig~g~~~~v~~~~~~~--------~~~~avk~~~~~ 35 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQ--------GQLIAVKQVELD 35 (265)
T ss_pred cceEeccCCeEEEEEEEcC--------CCeEEEEEeecC
Confidence 4578999999999998643 689999976543
No 76
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=93.52 E-value=0.17 Score=48.68 Aligned_cols=29 Identities=24% Similarity=0.227 Sum_probs=24.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.++.|+.|+||+|+.+.. |+.||+|+..
T Consensus 22 ~~lg~g~~~~v~~~~~~~~-------~~~~a~K~~~ 50 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKT-------GQLAAIKVMD 50 (282)
T ss_pred eeeccCCCeEEEEEEEcCC-------CcEEEEEEEe
Confidence 6799999999999998752 6899999853
No 77
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=93.48 E-value=0.41 Score=47.72 Aligned_cols=30 Identities=30% Similarity=0.269 Sum_probs=25.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.||.|+.|+||+|+.+.+ |+.||||+..++
T Consensus 2 ~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~ 31 (320)
T cd05590 2 VLGKGSFGKVMLARLKES-------GRLYAVKVLKKD 31 (320)
T ss_pred eeeeCCCeEEEEEEEcCC-------CCEEEEEEEEHH
Confidence 578999999999998752 689999987653
No 78
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=93.47 E-value=0.47 Score=44.85 Aligned_cols=31 Identities=29% Similarity=0.387 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.|.-|.||+|+.++ ++.||||+.+++
T Consensus 11 ~~~ig~g~~~~v~~~~~~~--------~~~~~vK~~~~~ 41 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNG--------TTKVAVKTLKPG 41 (261)
T ss_pred eeeeccCcceEEEEEEEcC--------CceEEEEEecCC
Confidence 3689999999999999764 478999988764
No 79
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=93.44 E-value=0.22 Score=49.72 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=25.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.||.|+-|+||+|+.+.+ |+.||||+.+.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~ 36 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDT-------GQVYAMKVLRK 36 (350)
T ss_pred EEEEeCCcEEEEEEEECCC-------CCEEEEEEEEH
Confidence 5689999999999998752 68999999763
No 80
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=93.41 E-value=0.33 Score=49.37 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=25.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
-++||.|+.|.||+|+.+.. |+.||||+.+
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~-------~~~~avK~~~ 35 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDT-------NALYAMKTLR 35 (376)
T ss_pred EEEEEeCCCeEEEEEEECCC-------CCEEEEEEEc
Confidence 36799999999999998752 6899999875
No 81
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=93.39 E-value=0.26 Score=49.89 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=26.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
-+.||.|+.|+||+|+.+.. |+.||||+.++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~ 36 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDT-------GHIYAMKILRK 36 (360)
T ss_pred EEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEH
Confidence 36799999999999998752 68999998763
No 82
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=93.39 E-value=0.39 Score=46.13 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=25.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|+.|+||+|+.+. .|+.||+|+.+..
T Consensus 11 ~~l~~g~~~~v~~~~~~~-------~~~~~~iK~~~~~ 41 (280)
T cd06611 11 GELGDGAFGKVYKAQHKE-------TGLFAAAKIIQIE 41 (280)
T ss_pred HHhcCCCCceEEEEEEcC-------CCcEEEEEEEeeC
Confidence 458899999999999864 2689999987543
No 83
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=93.33 E-value=0.66 Score=44.19 Aligned_cols=36 Identities=33% Similarity=0.514 Sum_probs=27.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+.|.||+|+.+.. + .+...||||+.+++.
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~vaik~~~~~~ 44 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLP--G--KKEIDVAIKTLKAGS 44 (266)
T ss_pred eeEecCCccceEEEEEEccC--C--CCcceEEEEEcCCCC
Confidence 57889999999999999752 1 124689999987653
No 84
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=93.29 E-value=0.65 Score=44.38 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=53.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.+|.|+-|+||+|+.++. .+...++.||||+....... +..
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~--~~~~~~~~vaiK~~~~~~~~----------------------------~~~------- 52 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHL--EPENDKELVAVKTLKETASN----------------------------DAR------- 52 (280)
T ss_pred HhhccccCCceEeeeeeccc--cCcCCcceEEEEeecccCCH----------------------------HHH-------
Confidence 36789999999999998652 11223589999975432110 011
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCC-eEeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~-V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
-++.+|++.++++. .++ +.+... .......+++|||++|.++.+++..
T Consensus 53 ---~~~~~e~~~l~~l~-----~~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~~ 101 (280)
T cd05049 53 ---KDFEREAELLTNFQ-----HENIVKFYGV-CTEGDPPIMVFEYMEHGDLNKFLRS 101 (280)
T ss_pred ---HHHHHHHHHHHhcC-----CCCchheeeE-EecCCCeEEEEecCCCCCHHHHHHh
Confidence 13355655555442 111 111111 1123567999999999999887653
No 85
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=93.25 E-value=0.5 Score=44.37 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=24.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++++.|.-|.||+|...+ |+.|+||+....
T Consensus 1 ~~lg~g~~g~v~~~~~~~--------~~~v~~K~~~~~ 30 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG--------NTEVAVKTCRST 30 (251)
T ss_pred CccccCCCceEEEEEEeC--------CCcEEEEecccc
Confidence 368899999999999864 589999976543
No 86
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=93.14 E-value=0.62 Score=44.13 Aligned_cols=31 Identities=26% Similarity=0.327 Sum_probs=25.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-+.++.|+-|.||+|...+ ++.||||...++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~--------~~~v~iK~~~~~ 41 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNN--------STKVAVKTLKPG 41 (261)
T ss_pred eeecCCcCCceEEEEEecC--------CceEEEEEccCC
Confidence 3678999999999999754 578999987653
No 87
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=93.14 E-value=0.41 Score=47.96 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=26.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.||.|+-|.||+|+.+.+ |+.||||+.+.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~ 53 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGT-------GEYYAIKCLKK 53 (329)
T ss_pred EEEEEecCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 47899999999999998752 68999999753
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=93.13 E-value=0.58 Score=46.65 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=24.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.||.|+.|.||+++...+ ...|+.||||+.+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~----~~~~~~~avK~~~ 33 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTG----ADTGKIFAMKVLK 33 (323)
T ss_pred ceeeecCCeEEEEEEEccc----CCCCCEEEEEEEE
Confidence 4689999999999987531 1236899999875
No 89
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=93.12 E-value=0.8 Score=43.85 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=26.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.+..|+||+|+.+.+ |+.||||+.+.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~ 36 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTT-------GEIVALKEIHLD 36 (284)
T ss_pred eeeeccCCceEEEEEEECCC-------CeEEEEEEeccc
Confidence 46789999999999998752 689999988654
No 90
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=93.08 E-value=0.78 Score=43.53 Aligned_cols=30 Identities=20% Similarity=0.219 Sum_probs=25.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.+++|..|.||+|..++ |+.||||+.+++
T Consensus 12 ~~ig~G~~g~v~~~~~~~--------~~~~a~K~~~~~ 41 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNG--------HTKVAIKSLKQG 41 (260)
T ss_pred eeeccCccceEEeeecCC--------CceEEEEEecCC
Confidence 569999999999999764 589999987643
No 91
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=93.07 E-value=0.64 Score=44.92 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=25.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.|+.|.-|+||+|....+ |+.||+|+...+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~-------~~~~a~k~~~~~ 41 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPT-------GTVMAKKVVHIG 41 (284)
T ss_pred HHcCCCCCeEEEEEEEcCC-------CcEEEEEEEEec
Confidence 5788999999999998652 689999987654
No 92
>PLN02756 S-methyl-5-thioribose kinase
Probab=93.04 E-value=0.94 Score=48.48 Aligned_cols=107 Identities=14% Similarity=0.043 Sum_probs=65.1
Q ss_pred CCCCCHHHHHHHHHHH------hCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchH
Q 012848 260 APEHSFAYTKKTIERA------FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIR 333 (455)
Q Consensus 260 vpp~~~~~v~~vle~e------lG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~ 333 (455)
..+.+.+.+..-+.+. +|.. +...+-++++-|.+..||+=+.. +..|+||...|+++.
T Consensus 6 y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~~---------~~svVVKqa~p~~r~--- 69 (418)
T PLN02756 6 FRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVSS---------SGSFVIKQALPYIRC--- 69 (418)
T ss_pred cccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEcC---------CccEEEEeCCccccC---
Confidence 3445555555555444 3321 23456789999999999995431 357999999988741
Q ss_pred hHHHHHHHHHHHHccccCccc-cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEee
Q 012848 334 RDFVIINLAAKISSVIPAVKW-LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412 (455)
Q Consensus 334 ~DL~il~~la~l~~~~P~l~~-l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE 412 (455)
++-.| ++++ ++ ..|++.+....+. ..+.||++|.--....|++||
T Consensus 70 ----------------vga~wpl~~~---R~-----------~~Ea~aL~~~~~~----~p~~VPkVy~~ded~~vlvME 115 (418)
T PLN02756 70 ----------------IGESWPMTKE---RA-----------YFEATALREHGRL----CPDHVPEVYHFDRTMALIGMR 115 (418)
T ss_pred ----------------CCccccCCcc---HH-----------HHHHHHHHHhhhc----CCCCCCeEEEECCCCCEEEEe
Confidence 11112 1111 11 3345555544432 347899999533455999999
Q ss_pred cccC
Q 012848 413 YEQG 416 (455)
Q Consensus 413 ~i~G 416 (455)
|++|
T Consensus 116 ~L~~ 119 (418)
T PLN02756 116 YLEP 119 (418)
T ss_pred ecCC
Confidence 9999
No 93
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=93.03 E-value=0.61 Score=43.72 Aligned_cols=30 Identities=20% Similarity=0.166 Sum_probs=24.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.++.|..|+||+|+.+.+ |+.|++|...
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~~k~~~ 34 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKAD-------KRVYAMKQID 34 (256)
T ss_pred eEEecCCCCeEEEEEEEcCC-------CcEEEEEEee
Confidence 35689999999999999752 6899999753
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=93.01 E-value=0.47 Score=47.26 Aligned_cols=30 Identities=23% Similarity=0.218 Sum_probs=25.2
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.||.|+-|.||+|+.+.. |+.||||+.+.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~ 31 (316)
T cd05592 2 VLGKGSFGKVMLAELKGT-------NEFFAIKALKKD 31 (316)
T ss_pred eeeeCCCeEEEEEEECCC-------CCEEEEEEEEHH
Confidence 578999999999998752 689999997754
No 95
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=93.01 E-value=0.78 Score=43.80 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=24.8
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
||.|+-|.||+|+++.. .+|..||||+..++.
T Consensus 3 ig~G~~g~v~~~~~~~~-----~~~~~vavk~~~~~~ 34 (257)
T cd05115 3 LGSGNFGCVKKGVYKMR-----KKQIDVAIKVLKNEN 34 (257)
T ss_pred cCCCCcccEEEEEEecC-----CCceeEEEEEccccc
Confidence 78999999999988632 125789999887653
No 96
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=92.96 E-value=0.72 Score=43.84 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=25.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
..|+.|+-|+||+|+... +..||+|+.+++
T Consensus 12 ~~ig~g~~~~v~~~~~~~--------~~~~~lK~~~~~ 41 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNG--------TTKVAIKTLKPG 41 (260)
T ss_pred eeecCcCCCeEEEEEEcC--------CceEEEEEcccC
Confidence 579999999999998864 357999998775
No 97
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=92.90 E-value=0.94 Score=42.55 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=27.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.++.|.||+|+.+.. |+.|+||+.+++.
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~-------~~~~~vk~~~~~~ 38 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPT-------GKIYALKKIHVDG 38 (264)
T ss_pred eeeeeecCCeEEEEEEEcCC-------CcEEEEEEeccCc
Confidence 37899999999999999752 6899999876643
No 98
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=92.80 E-value=0.82 Score=43.08 Aligned_cols=36 Identities=31% Similarity=0.284 Sum_probs=27.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
+.|++|+-|.||+|...++ .| .+..||||+..++..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~-~~---~~~~vaiK~~~~~~~ 36 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTS-GG---KVIPVAVKCLKSDKL 36 (257)
T ss_pred CcCCccCcccEEeeeEecC-CC---CceEEEEeecCCccc
Confidence 3689999999999998652 11 235799998877654
No 99
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=92.76 E-value=1.3 Score=41.84 Aligned_cols=32 Identities=16% Similarity=0.050 Sum_probs=25.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.++.|+||+|+.+.+ |+.||+|+.++.
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~-------~~~~alk~~~~~ 36 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKT-------GTLMAVKQVTYV 36 (268)
T ss_pred cceecCcCceEEEEEEEcCC-------CcEEEEEEeecc
Confidence 46789999999999987542 689999987644
No 100
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=92.75 E-value=0.43 Score=48.75 Aligned_cols=30 Identities=17% Similarity=0.076 Sum_probs=25.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
-+.||.|+.|+||+|+.+.. |+.||||+.+
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~ 35 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDT-------KALYAMKTLR 35 (382)
T ss_pred EEEEEeCCCEEEEEEEECCC-------CCEEEEEEEe
Confidence 35689999999999998752 6899999864
No 101
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=92.73 E-value=0.63 Score=44.03 Aligned_cols=30 Identities=33% Similarity=0.436 Sum_probs=24.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|.-|.||+|+.++ +..||+|+...+
T Consensus 10 ~~lg~G~~~~vy~~~~~~--------~~~~a~K~~~~~ 39 (256)
T cd05114 10 KELGSGQFGVVHLGKWRA--------QIKVAIKAINEG 39 (256)
T ss_pred eEecCCcCceEEEEEecc--------CceEEEEecccC
Confidence 569999999999999875 468999976544
No 102
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=92.72 E-value=0.98 Score=42.93 Aligned_cols=36 Identities=31% Similarity=0.578 Sum_probs=27.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+.|+||+|+++.+ | .++..|+||+.+++.
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~~~ik~~~~~~ 45 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMP--G--RKEVAVAIKTLKPGY 45 (268)
T ss_pred eeEecCCCCccEEEEEEecC--C--CCceEEEEEeccccC
Confidence 57899999999999999752 3 123589999887663
No 103
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=92.48 E-value=0.53 Score=43.97 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=23.9
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+|.|..|+||+++... .|+.||||+.+.+
T Consensus 1 lg~G~~~~v~~~~~~~-------~~~~~~~k~~~~~ 29 (250)
T cd05123 1 LGKGSFGKVLLVRKKD-------TGKLYAMKVLKKK 29 (250)
T ss_pred CCCCCceEEEEEEECC-------CCcEEEEEEeehh
Confidence 5789999999999864 2689999987665
No 104
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=92.40 E-value=0.49 Score=47.41 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.4
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|+||+|+-+. .|+.||||+..+
T Consensus 2 ~lG~G~~g~Vy~~~~~~-------~~~~~avK~~~~ 30 (328)
T cd05593 2 LLGKGTFGKVILVREKA-------SGKYYAMKILKK 30 (328)
T ss_pred eeeeCCCEEEEEEEECC-------CCCEEEEEEEEH
Confidence 57899999999999865 269999999764
No 105
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=92.38 E-value=0.8 Score=43.49 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=25.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
..+|.|+.|.||+|+.++.. .....++.||||....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~iK~~~~~ 37 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDIL-GPGSGPIRVAVKTLRKG 37 (269)
T ss_pred CccccccceeEEeeeecccc-cCcccceeehhhhhhcc
Confidence 36899999999999987521 01123578999965443
No 106
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=92.34 E-value=0.41 Score=46.81 Aligned_cols=31 Identities=26% Similarity=0.248 Sum_probs=25.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.|+.|+.|.||+|+.+.+ |+.||||+...
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~ 36 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRIS-------EHYYALKVMAI 36 (291)
T ss_pred eeeeecCCCeEEEEEEEcCC-------CCEEEEEEEEH
Confidence 36799999999999998752 68999998753
No 107
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=92.27 E-value=0.75 Score=44.73 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=24.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.|+.|+-|+||+|.... .|+.||||+...
T Consensus 6 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~ 35 (285)
T cd05605 6 RVLGKGGFGEVCACQVRA-------TGKMYACKKLEK 35 (285)
T ss_pred EEEecCCCeEEEEEEEcC-------CCceEEEEEEeh
Confidence 458999999999999764 268999998654
No 108
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=92.22 E-value=1.2 Score=41.92 Aligned_cols=33 Identities=18% Similarity=0.044 Sum_probs=27.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.++|+.|+.|.||+|+... +|+.|+||+.+...
T Consensus 5 ~~~lg~G~~~~v~~~~~~~-------~~~~~~ik~~~~~~ 37 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLD-------TGELMAVKEIRIQD 37 (264)
T ss_pred eeEeecCCCcEEEEEEECC-------CCcEEEEEEEECcc
Confidence 3689999999999999864 26899999976553
No 109
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=92.22 E-value=0.63 Score=46.61 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=25.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|+||+|+.+.+ |+.||||+.+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~ 35 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNT-------GQVYAMKILN 35 (331)
T ss_pred EEEEEecCCeEEEEEEECCC-------CCEEEEEEEE
Confidence 36789999999999998752 6899999975
No 110
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=92.20 E-value=1.3 Score=42.48 Aligned_cols=36 Identities=22% Similarity=0.125 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.+++|..|.||+|+.+.. ....|+.||||+.+..
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~---~~~~~~~v~iK~~~~~ 44 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPL---QDNTGEVVAVKKLQHS 44 (284)
T ss_pred eeeccCCCCceEEEEEecCC---cCCCCcEEEEEEeccC
Confidence 36799999999999987521 0123689999987654
No 111
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=92.18 E-value=0.64 Score=46.32 Aligned_cols=29 Identities=14% Similarity=0.114 Sum_probs=24.4
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|+||+|+.+.+ |+.||||+.++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~~ 30 (323)
T cd05571 2 LLGKGTFGKVILVREKAT-------GKYYAMKILKK 30 (323)
T ss_pred eeeeCCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 578999999999998752 68999998764
No 112
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=92.14 E-value=0.56 Score=44.51 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|.-|.||+|...+ ++.||||..+++
T Consensus 11 ~~~lg~g~~~~v~~~~~~~--------~~~v~iK~~~~~ 41 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNN--------TTPVAVKTLKPG 41 (261)
T ss_pred EEEecccCCccEEEEEecC--------CeEEEEEeeCCC
Confidence 3789999999999999753 578999987764
No 113
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=92.13 E-value=0.41 Score=47.64 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.0
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|+||+|+-+. .|+.||||+..+
T Consensus 2 ~lG~G~~g~V~~~~~~~-------~~~~~a~K~~~~ 30 (325)
T cd05594 2 LLGKGTFGKVILVKEKA-------TGRYYAMKILKK 30 (325)
T ss_pred eeeeCCCEEEEEEEECC-------CCCEEEEEEEEH
Confidence 47899999999998764 268999998754
No 114
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=92.05 E-value=0.22 Score=57.17 Aligned_cols=123 Identities=17% Similarity=0.224 Sum_probs=71.7
Q ss_pred CChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhH--HHHHHHHHHHHccccCcccc
Q 012848 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD--FVIINLAAKISSVIPAVKWL 355 (455)
Q Consensus 278 ~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~D--L~il~~la~l~~~~P~l~~l 355 (455)
.+.+++|+-++ -||-|-=|+||+++=+.. |+-+||||++|+....-+.. -.|++... .-|.
T Consensus 15 pdp~d~~ei~e--vig~Gtygkv~k~k~~~~-------~~~aa~kI~~~~~d~deEiE~eynil~~~~----~hpn---- 77 (953)
T KOG0587|consen 15 PDPADIFEIIE--VIGNGTYGKVYKGRHVKT-------GQLAAIKIMDPTEDEEEEIELEYNMLKKYS----HHPN---- 77 (953)
T ss_pred CCCCCccEEEE--EEeeccceeEEEEeeeec-------CceeeeEeecCCccccHHHHHHHHHHHhcc----CCCC----
Confidence 45566665333 467788899999987752 69999999999975433222 22222211 1111
Q ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhC-CCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHH
Q 012848 356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKS 434 (455)
Q Consensus 356 ~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~-~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~ 434 (455)
..+|.-.|. ..+ -.+.-+| |||||+-|-+++|+++...++...-.
T Consensus 78 -------------------------v~~fyg~~~k~~~--~~~DqLW-------LVMEfC~gGSVTDLVKn~~g~rl~E~ 123 (953)
T KOG0587|consen 78 -------------------------VATFYGAFIKKDP--GNGDQLW-------LVMEFCGGGSVTDLVKNTKGNRLKEE 123 (953)
T ss_pred -------------------------cceEEEEEEEecC--CCCCeEE-------EEeeccCCccHHHHHhhhcccchhhH
Confidence 011111110 001 1222333 99999999999999987664433345
Q ss_pred HHHHHHHHHHHHhhhcc
Q 012848 435 ALAHIGTHALLKMLLVP 451 (455)
Q Consensus 435 ~LA~~g~~aflkmlf~d 451 (455)
-+|.++-++++--+-.|
T Consensus 124 ~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 124 WIAYILREILRGLAHLH 140 (953)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 67888877776544333
No 115
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=92.04 E-value=1.1 Score=44.91 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=25.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.||.|+.|+||+|+.+.. |+.||||+.+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~ 31 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKN-------DQIYAMKVVKKE 31 (327)
T ss_pred CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEHH
Confidence 3589999999999998752 689999997643
No 116
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=92.03 E-value=0.47 Score=44.53 Aligned_cols=115 Identities=20% Similarity=0.101 Sum_probs=64.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+.||+|+-|.||+|+.+.+ |+.||+|+.+..-...-.. ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~-------~~~~~~K~~~~~~~~~~~~-------------------------------~~~- 45 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKN-------GQKVAVKIIDKSEIEEEER-------------------------------EEN- 45 (260)
T ss_dssp EEEEEESSEEEEEEEETTT-------TEEEEEEEEESTTHHHHHH-------------------------------HHH-
T ss_pred EEEEeCCCEEEEEEEECCC-------CeEEEEEEecccccccccc-------------------------------chh-
Confidence 5789999999999999762 6899999887653211100 000
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCe-EeCcccCCCCCCCeEEeecccCccccchhHHh-hhchhhHHHHHHHHHHHHHHh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKM 447 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V-~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l-~~~~~~~~~LA~~g~~aflkm 447 (455)
..|++.++++. .+.+ .+-.++ .-...-.++|||++|..+.+++... .-.......++..++++ +..
T Consensus 46 -----~~e~~~~~~l~-----~~~i~~~~~~~-~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-L~~ 113 (260)
T PF00069_consen 46 -----IREIKILRRLR-----HPNIVQILDVF-QDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEA-LAY 113 (260)
T ss_dssp -----HHHHHHHHHHT-----BTTBCHEEEEE-EESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHH-HHH
T ss_pred -----hhhhhcccccc-----ccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence 11555555552 2222 111111 1145556999999999888776521 11222234455555554 344
Q ss_pred hhccCCCC
Q 012848 448 LLVPYLNN 455 (455)
Q Consensus 448 lf~dgFv~ 455 (455)
|-..|.+|
T Consensus 114 Lh~~~i~H 121 (260)
T PF00069_consen 114 LHSKGIVH 121 (260)
T ss_dssp HHHTTEEE
T ss_pred cccccccc
Confidence 44445444
No 117
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=92.00 E-value=0.76 Score=43.42 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=27.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|+-|.||+|..+. .|+.|++|+...+.
T Consensus 6 ~~~ig~g~~~~v~~~~~~~-------~~~~~~ik~~~~~~ 38 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRP-------TGKIMAVKTIRLEI 38 (265)
T ss_pred HHHhcCCCCeEEEEEEEcC-------CCcEEEEEEEeccc
Confidence 3578999999999999975 26899999877664
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=91.99 E-value=0.54 Score=46.77 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=25.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.||.|+.|.||+|..+.+ |+.||||+.+++
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~ 35 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKT-------GELYAIKALKKG 35 (324)
T ss_pred EEEeecCCEEEEEEEECCC-------CCEEEEEEEEHH
Confidence 5689999999999998752 689999997653
No 119
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=91.95 E-value=0.95 Score=43.28 Aligned_cols=28 Identities=32% Similarity=0.316 Sum_probs=24.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
+.++++..|+||+|+.+. .|+.||||+.
T Consensus 7 ~~lg~g~~~~v~~~~~~~-------~~~~~~ik~~ 34 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKR-------TNQVVAIKVI 34 (274)
T ss_pred hhhcCCCCeEEEEEEECC-------CCeEEEEEEe
Confidence 568899999999999875 2699999986
No 120
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=91.92 E-value=1.1 Score=42.95 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=25.2
Q ss_pred ccccccCcceEEEeEecccCC-----CCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYP-----GQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~-----G~~~~G~~VAVKVqrPg 327 (455)
+.++.|.-|+||+|++....+ +....+.+|+||+..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~ 43 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS 43 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh
Confidence 357889999999999854210 01123467999987664
No 121
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=91.89 E-value=0.73 Score=46.44 Aligned_cols=47 Identities=23% Similarity=0.253 Sum_probs=32.4
Q ss_pred HHhCCChHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 274 RAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 274 ~elG~~~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++++..+.++=+.++ .++|++|+.|+||+|..+.+ |+.||||+...+
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~-------~~~vaiK~~~~~ 53 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKT-------GLRVAVKKLSRP 53 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCC-------CeEEEEEEecCc
Confidence 344443333333333 47999999999999987642 689999987664
No 122
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=91.88 E-value=0.81 Score=43.48 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|+||+|+...+ |+.||||+.++.
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~ 45 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNT-------GELAAIKVIKLE 45 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCC-------CcEEEEEEEecC
Confidence 36789999999999988652 689999998654
No 123
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=91.80 E-value=1.1 Score=44.52 Aligned_cols=29 Identities=28% Similarity=0.229 Sum_probs=24.4
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+.|+||+|+.+.+ |+.||||+..+
T Consensus 2 ~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~ 30 (323)
T cd05575 2 VIGKGSFGKVLLAKHKAD-------GKFYAVKVLQK 30 (323)
T ss_pred eeeeCCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 578999999999998752 69999998654
No 124
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=91.72 E-value=0.84 Score=45.46 Aligned_cols=29 Identities=28% Similarity=0.283 Sum_probs=24.3
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|+||+|+-+. +|+.||||+...
T Consensus 2 ~lG~G~~g~V~~~~~~~-------~~~~~aiK~~~~ 30 (325)
T cd05604 2 VIGKGSFGKVLLAKRKL-------DGKCYAVKVLQK 30 (325)
T ss_pred ceeeCCCeEEEEEEECC-------CCCEEEEEEEEH
Confidence 47899999999999865 269999998754
No 125
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=91.71 E-value=1.1 Score=42.16 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|+.|+||+|+.+.+ |+.||+|+.++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~ 37 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLD-------GRVVALKKVQI 37 (267)
T ss_pred eeeeccCCceEEEEEEEcCC-------CCEEEEEEeec
Confidence 46799999999999999742 68999997653
No 126
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=91.62 E-value=0.9 Score=45.34 Aligned_cols=29 Identities=14% Similarity=0.114 Sum_probs=24.3
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|+||+|+-+. .|+.||+|+.++
T Consensus 2 ~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~ 30 (323)
T cd05595 2 LLGKGTFGKVILVREKA-------TGRYYAMKILRK 30 (323)
T ss_pred eeeeCCCEEEEEEEECC-------CCCEEEEEEEEH
Confidence 47899999999999865 268999999764
No 127
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=91.61 E-value=0.96 Score=45.35 Aligned_cols=31 Identities=26% Similarity=0.241 Sum_probs=25.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.||.|+.|+||+|+.+.+ |+.||||+....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~ 31 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKT-------ERIYAMKVVKKE 31 (329)
T ss_pred CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEhh
Confidence 3689999999999998752 689999987653
No 128
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=91.61 E-value=1.1 Score=42.74 Aligned_cols=36 Identities=17% Similarity=0.020 Sum_probs=27.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.|..|.||+|++.+.. ...|+.||||+..+.-
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~---~~~~~~~avK~~~~~~ 45 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLG---DNTGEQVAVKSLNHSG 45 (284)
T ss_pred eeeccCCCeeEEEeeecCCC---CCCceEEEEEEecccc
Confidence 67899999999999986421 2246899999987653
No 129
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=91.59 E-value=1.7 Score=41.87 Aligned_cols=35 Identities=17% Similarity=0.079 Sum_probs=25.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|+.|+||.++.+.. ....|+.||||+.+.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~---~~~~~~~vaiK~~~~~ 44 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPA---NDGTGEMVAVKTLKRE 44 (283)
T ss_pred eecccCCCcEEEEeeEccc---cCCCCceEEEEEeccc
Confidence 5688999999998876421 1224689999987655
No 130
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=91.54 E-value=1.1 Score=44.54 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=26.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+-|.||+|+.+. .|+.||||+.+.+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~-------~~~~~aiK~~~~~ 36 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKG-------TDELYAIKILKKD 36 (323)
T ss_pred EEEEeeCCCeEEEEEEECC-------CCCEEEEEEEEHH
Confidence 3568999999999999865 2689999997653
No 131
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.52 E-value=0.86 Score=47.72 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.+|+||-|-|+.|+-... |+.|||||....
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t-------~~~vAiKii~~~ 53 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLT-------GEKVAIKIIDRK 53 (370)
T ss_pred eeeecCCCCeeEEEeeeccC-------CCeEEEEEechh
Confidence 57899999999999988652 699999986655
No 132
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=91.49 E-value=1.1 Score=42.43 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=25.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|.||+|+.+. +..+|||+..++
T Consensus 9 ~~~lg~G~~~~v~~~~~~~--------~~~~~iK~~~~~ 39 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRG--------KIDVAIKMIREG 39 (256)
T ss_pred hhhhccCCCceEEEeEecC--------CccEEEEEeccC
Confidence 4678999999999998754 468999987654
No 133
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=91.43 E-value=1.3 Score=42.22 Aligned_cols=35 Identities=31% Similarity=0.573 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+-++.|.-|-||+|+++.+ | ..+..||||+...+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~vaiK~~~~~ 43 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLP--G--KREIFVAIKTLKSG 43 (269)
T ss_pred EeEecCCCCCeEEEEEEecC--C--CCceeEEEEEcCCC
Confidence 45689999999999999762 2 11357999987654
No 134
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=91.41 E-value=0.68 Score=45.38 Aligned_cols=36 Identities=31% Similarity=0.286 Sum_probs=27.1
Q ss_pred hHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 280 ~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
+.+.++.+ ..|+.|+-|.||+|+...+ |+.||||+.
T Consensus 20 ~~~~~~~~--~~lg~g~~g~v~~~~~~~~-------~~~vaiK~~ 55 (292)
T cd06658 20 PREYLDSF--IKIGEGSTGIVCIATEKHT-------GKQVAVKKM 55 (292)
T ss_pred hHHHHhhh--hcccCCCCeEEEEEEECCC-------CCEEEEEEE
Confidence 34444444 5689999999999998642 689999975
No 135
>PHA02988 hypothetical protein; Provisional
Probab=91.39 E-value=1.3 Score=43.43 Aligned_cols=31 Identities=3% Similarity=0.106 Sum_probs=25.9
Q ss_pred cccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 287 fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+...++.+.-+.||+|+.. |+.||||+.+.
T Consensus 23 ~~~~~i~~g~~~~v~~~~~~---------~~~vavK~~~~ 53 (283)
T PHA02988 23 YTSVLIKENDQNSIYKGIFN---------NKEVIIRTFKK 53 (283)
T ss_pred CCCeEEeeCCceEEEEEEEC---------CEEEEEEeccc
Confidence 34678999999999999983 58999998764
No 136
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=91.33 E-value=1.1 Score=44.49 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=26.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+.|.||+|+.+.. |+.||||+.+++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~ 36 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGT-------DELYAIKILKKD 36 (324)
T ss_pred EEEEeeccCeEEEEEEECCC-------CCEEEEEEEEHH
Confidence 36789999999999998752 689999997653
No 137
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=91.29 E-value=1.1 Score=42.77 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=26.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.|+.|+||+|+.+++ |+.||||+.++..
T Consensus 5 ~~l~~g~~~~vy~~~~~~~-------~~~~~~K~~~~~~ 36 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKT-------GELVALKKIRMEN 36 (287)
T ss_pred EEeccCCCeEEEEEEECCC-------CeEEEEEEEeccc
Confidence 4678999999999998752 6899999988653
No 138
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=91.28 E-value=1.3 Score=43.79 Aligned_cols=27 Identities=22% Similarity=0.272 Sum_probs=22.7
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
||.|+.|.||+|+.+++ |+.||||+..
T Consensus 1 lg~G~~g~Vy~~~~~~~-------~~~~aiK~i~ 27 (312)
T cd05585 1 IGKGSFGKVMQVRKRDT-------QRIYALKTIR 27 (312)
T ss_pred CCcCCCeEEEEEEECCC-------CCEEEEEEEE
Confidence 57899999999998752 6899999865
No 139
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=91.26 E-value=1.1 Score=43.25 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.+++++.|+||+|+.+++ |+.||||+..+
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~-------~~~~aik~~~~ 57 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKD-------GSLAAVKILDP 57 (291)
T ss_pred EEEeecCCCeEEEEEEECCC-------CCEEEEEEecc
Confidence 35899999999999998752 68999998764
No 140
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=91.15 E-value=0.67 Score=42.66 Aligned_cols=77 Identities=21% Similarity=0.242 Sum_probs=50.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+|++.|.-.+||+.+..+ ..+++|+-+|. . ..
T Consensus 3 ~~l~~G~~n~~~~v~~~~---------~~~vlK~~~~~-~------------------------------~~-------- 34 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD---------GRYVLKFYRPP-D------------------------------AA-------- 34 (239)
T ss_dssp EEEEESSSSEEEEEEETT---------SEEEEEEESSH-H------------------------------HH--------
T ss_pred ccCCCCCeeeEEEEEECC---------cEEEEEEeCCC-C------------------------------CH--------
Confidence 689999999999999853 59999985544 0 00
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccC-----CCCCCCeEEeecccCccccc
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-----PLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~-----~lst~rVLVmE~i~G~~i~~ 421 (455)
-+...|++.++.+.+. .+.+|+++. +.....+++|+|++|.++.+
T Consensus 35 --~~~~~e~~~~~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 35 --ERLRREAAVLRQLAEH-----GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp --HHHHHHHHHHHHHHHT-----TSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred --HHHHHHHHHHHHHHhc-----CCCCceEEeecccccccccceEEEEEeccccccc
Confidence 0113555555555543 236888885 22233589999999999886
No 141
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=91.11 E-value=1.5 Score=43.70 Aligned_cols=32 Identities=16% Similarity=0.093 Sum_probs=24.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.||.|+.|.||+++.... ...|+.||||+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~----~~~~~~~aiK~~~ 37 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTG----HDTGKLYAMKVLQ 37 (332)
T ss_pred EEEeecCCEEEEEEEEccc----CCCCCEEEEEEEE
Confidence 5789999999999987431 1237899999865
No 142
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=91.10 E-value=1.2 Score=42.77 Aligned_cols=91 Identities=23% Similarity=0.282 Sum_probs=51.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+-||.|+-|.||+|+++. .....+.+|+||+..+..... ..
T Consensus 5 ~~ig~G~fg~v~~~~~~~---~~~~~~~~V~vk~~~~~~~~~----------------------------~~-------- 45 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQ---KDNDKNQPVAVKILKPSSSEE----------------------------EE-------- 45 (259)
T ss_dssp EEEEEESSEEEEEEEEES---TTTSSEEEEEEEEESTTSSHH----------------------------HH--------
T ss_pred eEEccCCCcEEEEEEEEc---ccCCCCEEEEEEEeccccccc----------------------------cc--------
Confidence 458999999999999983 112246899999986643211 01
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l 426 (455)
-+|.+|.+.+.++ +.+++.-.--+..-..+-.+||||+++-++.+++...
T Consensus 46 --~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~ 95 (259)
T PF07714_consen 46 --EEFLNEIQILRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK 95 (259)
T ss_dssp --HHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT
T ss_pred --eeeeecccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence 1234455555444 1222211111111234568999999998999887654
No 143
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=91.09 E-value=0.96 Score=44.86 Aligned_cols=29 Identities=28% Similarity=0.224 Sum_probs=24.3
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+.|+||+|+.+++ |+.||||+...
T Consensus 2 ~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~ 30 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSD-------GSFYAVKVLQK 30 (321)
T ss_pred eeeeCCCEEEEEEEECCC-------CCEEEEEEEEH
Confidence 578999999999998752 68999998753
No 144
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=91.09 E-value=1.3 Score=43.41 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=26.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.++.|.||+|+..+. |+.||||+.++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~-------~~~~aiK~~~~~ 37 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGT-------GKLFALKVLDKK 37 (316)
T ss_pred eeecCCccEEEEEEEEcCC-------CcEEEEEEEecc
Confidence 5789999999999998752 689999988754
No 145
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=91.04 E-value=0.89 Score=46.17 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=25.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+.|.||+|+.+.. |+.||||+.+
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~-------~~~~aiK~~~ 35 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDT-------GHVYAMKILR 35 (363)
T ss_pred eEEEEeCCCEEEEEEEECCC-------CCEEEEEEEE
Confidence 36799999999999998752 6899999875
No 146
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=90.97 E-value=1.2 Score=41.84 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=24.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.++.+..|.||+|..+++ +++||||+..
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~ 34 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKAD-------QKLVIIKQIP 34 (256)
T ss_pred EEEecccCceEEEEEEEcCC-------CcEEEEEEEe
Confidence 36789999999999998652 6899999864
No 147
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=90.92 E-value=1.2 Score=43.37 Aligned_cols=29 Identities=28% Similarity=0.106 Sum_probs=24.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.+.|+.|+.|.||+|..+.+ |+.|+||+.
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~-------~~~~~iK~~ 52 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKST-------GRQVAVKKM 52 (285)
T ss_pred ceEeccCCCeEEEEEEECCC-------CCEEEEEEE
Confidence 47999999999999997642 689999963
No 148
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=90.88 E-value=1.3 Score=44.34 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=24.5
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.||.|+-|.||+|+.+.. |+.||||+.++
T Consensus 2 ~lG~G~~g~V~~~~~~~~-------~~~~aiK~i~~ 30 (329)
T cd05588 2 VIGRGSYAKVLLVELKKT-------RRIYAMKVIKK 30 (329)
T ss_pred eEeeCCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 578999999999998752 68999999764
No 149
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=90.84 E-value=1.2 Score=44.38 Aligned_cols=29 Identities=31% Similarity=0.267 Sum_probs=24.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
-||.|+.|.||+|+.+.+ |+.||||+.+.
T Consensus 2 ~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~ 30 (318)
T cd05570 2 VLGKGSFGKVLLAELKGT-------DELYAVKVLKK 30 (318)
T ss_pred eeeeCCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 378999999999998752 68999998764
No 150
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=90.84 E-value=2 Score=41.23 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=27.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.|+.|.||+|..... +....+..|++|+.+..
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~v~~K~~~~~ 46 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGP--NERLSATSVAIKTLKEN 46 (283)
T ss_pred hhcccCccCCcEEEEEEecC--CCCcceeeEEEEecccC
Confidence 46799999999999998652 11123478999987654
No 151
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=90.83 E-value=0.95 Score=45.67 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=25.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.+ |+.||||+..
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~ 35 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDT-------GHIYAMKKLR 35 (364)
T ss_pred EEEEEecCCEEEEEEEECCC-------CCEEEEEEEE
Confidence 36799999999999998752 6899999875
No 152
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=90.83 E-value=1.6 Score=42.25 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=22.4
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
||.|+.|.||+++.+.+ |+.||||+..
T Consensus 1 lg~G~~g~Vy~~~~~~~-------~~~~avK~~~ 27 (280)
T cd05608 1 LGKGGFGEVSACQMRAT-------GKLYACKKLN 27 (280)
T ss_pred CCCCCceeEEEEEEccC-------CcEEEEEeee
Confidence 57899999999998752 6899999754
No 153
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=90.82 E-value=0.2 Score=51.78 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHH
Q 012848 267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS 346 (455)
Q Consensus 267 ~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~ 346 (455)
+.++.=+.+|.++++|+|+-.+ -+|-||-|-||+|.-++. |+.||||-. | ++.
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~Es-------G~v~AIK~V-P-----V~s------------ 70 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRES-------GHVLAIKKV-P-----VDT------------ 70 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhcc-------CcEEEEEec-C-----ccc------------
Confidence 5666777889999999987665 489999999999999873 799999922 1 122
Q ss_pred ccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 347 ~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
+|.|++.|+ .+++|+|-..= .+-+...|++ |.=-+||||+-.-+|+|++..
T Consensus 71 ---------DLQEIIKEI--SIMQQC~S~yV---VKYYGSYFK~--------------sDLWIVMEYCGAGSiSDI~R~ 121 (502)
T KOG0574|consen 71 ---------DLQEIIKEI--SIMQQCKSKYV---VKYYGSYFKH--------------SDLWIVMEYCGAGSISDIMRA 121 (502)
T ss_pred ---------hHHHHHHHH--HHHHHcCCchh---hhhhhhhccC--------------CceEeehhhcCCCcHHHHHHH
Confidence 456667665 46677764211 1112233332 333489999999999998754
No 154
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=90.78 E-value=2.1 Score=40.63 Aligned_cols=112 Identities=16% Similarity=0.173 Sum_probs=63.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.++.|+-|.||+|+..+ +..|+||+.+++-.. .+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~--------~~~~~iK~~~~~~~~------------------------------~~------ 46 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNK--------HTKVAVKTMKPGSMS------------------------------VE------ 46 (260)
T ss_pred EeEecCccceEEEEEEecC--------CccEEEEecCCChhH------------------------------HH------
Confidence 4679999999999998754 467999987764110 00
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhc---hhhHHHHHHHHHHHHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALL 445 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~---~~~~~~LA~~g~~afl 445 (455)
++.+|..-+.++ ....-+.+...+.+ ..-.++|||++|..+.+++...... ......++..++.++.
T Consensus 47 ----~~~~e~~~l~~l----~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 47 ----AFLAEANVMKTL----QHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred ----HHHHHHHHHHhc----CCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 124444444332 22222334333332 4568999999998888765432111 1112234455555443
Q ss_pred HhhhccCCCC
Q 012848 446 KMLLVPYLNN 455 (455)
Q Consensus 446 kmlf~dgFv~ 455 (455)
.|-..|++|
T Consensus 117 -~lH~~~i~H 125 (260)
T cd05073 117 -FIEQRNYIH 125 (260)
T ss_pred -HHHhCCccc
Confidence 334566665
No 155
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=90.73 E-value=1.4 Score=42.84 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=25.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.|+.|+.|.||+|+...+ |+.||||+..+.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~-------~~~~aiK~~~~~ 36 (285)
T cd05632 6 RVLGKGGFGEVCACQVRAT-------GKMYACKRLEKK 36 (285)
T ss_pred EEEecCCCeEEEEEEECCC-------CcEEEEEEeehh
Confidence 5689999999999998752 689999987553
No 156
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=90.71 E-value=0.87 Score=44.13 Aligned_cols=32 Identities=25% Similarity=0.216 Sum_probs=26.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.|+.|.-|+||+|+.+.+ |+.||||+.+...
T Consensus 6 ~~lg~g~~~~vy~~~~~~~-------~~~v~iK~~~~~~ 37 (298)
T cd07841 6 KKLGEGTYAVVYKARDKET-------GRIVAIKKIKLGE 37 (298)
T ss_pred eeeeeccccEEEEEEECCC-------CcEEEEEEEeccc
Confidence 4589999999999998652 6899999887654
No 157
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=90.67 E-value=1.1 Score=43.44 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+-|.||+|..+.+ |+.||||+..+.
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~ 36 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLEKK 36 (285)
T ss_pred EEEEecCCCEEEEEEEEecC-------CceEEEEEeeHh
Confidence 35689999999999998752 689999976543
No 158
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=90.66 E-value=2.8 Score=40.61 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=23.8
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.|+.|+.|+||+|+...+ |+.||||+..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~-------~~~vaiK~~~~ 29 (278)
T cd05606 1 IIGRGGFGEVYGCRKADT-------GKMYAMKCLDK 29 (278)
T ss_pred CcccCCCeEEEEEEEecC-------CCEEEEEEeec
Confidence 378899999999987642 68999998765
No 159
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=90.65 E-value=0.92 Score=46.60 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=25.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.. |+.||+|+..
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~-------~~~~aiK~i~ 77 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKST-------RKVYAMKLLS 77 (371)
T ss_pred EEEEeecCCeEEEEEEECCC-------CcEEEEEEEE
Confidence 46799999999999998752 6899999864
No 160
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=90.65 E-value=1.7 Score=43.19 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=25.2
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.||.|+-|+||+|+.+.+ |+.||||+.+++
T Consensus 2 ~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~ 31 (316)
T cd05620 2 VLGKGSFGKVLLAELKGK-------GEYFAVKALKKD 31 (316)
T ss_pred eeeeCCCeEEEEEEECCC-------CCEEEEEEEEHH
Confidence 478999999999998752 689999988754
No 161
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=90.61 E-value=1.9 Score=40.81 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=24.3
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
||.|..|+||+|+.... +| .+..||+|+.+++
T Consensus 3 ig~G~~g~v~~~~~~~~-~~---~~~~~~iK~~~~~ 34 (257)
T cd05060 3 LGHGNFGSVVKGVYLMK-SG---KEVEVAVKTLKQE 34 (257)
T ss_pred cCccCceeEEEeEeecc-CC---CcceEEEEecccc
Confidence 68899999999987652 11 2479999987665
No 162
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=90.56 E-value=1.1 Score=44.77 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=25.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.||.|+-|+||+|+.+.+ |+.||||+...
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~ 35 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGT-------DELYAIKILKK 35 (323)
T ss_pred EEEEecCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 6799999999999998652 68999998653
No 163
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=90.42 E-value=0.53 Score=52.76 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=26.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.|+.|+.|.||+|+.... |+.||||+.+.
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~-------~~~vAiKvi~~ 39 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNN-------SKLYAVKVVKK 39 (669)
T ss_pred EEEEecCCCeEEEEEEECCC-------CcEEEEEEEeh
Confidence 47899999999999998752 68999999754
No 164
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=90.41 E-value=1.4 Score=41.62 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.++++.|+.+.||+|+.++. |+.||+|+...
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~ 35 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDT-------KKMFAMKYMNK 35 (258)
T ss_pred EEEeccCCCceEEEEEEccC-------CcEEEEEEEeh
Confidence 46889999999999998642 68999998864
No 165
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=90.37 E-value=0.35 Score=54.34 Aligned_cols=120 Identities=16% Similarity=0.186 Sum_probs=68.1
Q ss_pred ccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc----ccchHhHHHHHHHHHHHHccccCccccCHHHHH
Q 012848 286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV----GESIRRDFVIINLAAKISSVIPAVKWLRLDESV 361 (455)
Q Consensus 286 ~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV----~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v 361 (455)
..-.+-+|-|--|+||||+-+.. |+.||||+-++.. .+..-+.+.+|+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnket-------G~~vAvK~~~~~~~~r~~e~~~~Eieilk--------------------- 66 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKET-------GRLVAVKTFNKESSLRPRERWCREIEILK--------------------- 66 (732)
T ss_pred eeehhhhcCCccceeeeeccccc-------ccchhHHhhhhhcccchHHHHHHHHHHHH---------------------
Confidence 44567899999999999997763 7999999877643 111111122221
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccC--CCCCCCeEEeecccCccccchhHHhhhchhhH-HHHHH
Q 012848 362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLK-SALAH 438 (455)
Q Consensus 362 ~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~--~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~-~~LA~ 438 (455)
.|+ ..|+-+ .+.||..-- --+...||+|||+.|-++...++..+...-++ .++-.
T Consensus 67 ---------KLn----h~NIVk---------~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~ 124 (732)
T KOG4250|consen 67 ---------KLN----HPNIVK---------LFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLD 124 (732)
T ss_pred ---------HcC----chhhhh---------hcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHH
Confidence 122 112221 122222221 13677899999999999988776544322222 23322
Q ss_pred HHHH--HHHHhhhccCCCC
Q 012848 439 IGTH--ALLKMLLVPYLNN 455 (455)
Q Consensus 439 ~g~~--aflkmlf~dgFv~ 455 (455)
.+.+ +-++-|=++|.+|
T Consensus 125 lL~d~~~al~~LrEn~IvH 143 (732)
T KOG4250|consen 125 LLSDLVSALRHLRENGIVH 143 (732)
T ss_pred HHHHHHHHHHHHHHcCcee
Confidence 2222 3345566777776
No 166
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=90.36 E-value=1.4 Score=43.27 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-+.+|.|+-|.||+|+.+.. ++.||||+.+..
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~ 42 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLT-------ENLVALKEIRLE 42 (309)
T ss_pred EEEecccCCEEEEEEEecCC-------CCeEEEEEeecc
Confidence 46799999999999998652 589999986543
No 167
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=90.33 E-value=1.9 Score=41.95 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=25.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|+.|.||+|+.+.+ |+.||||+.+.
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~ 40 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLT-------ENLVALKEIRL 40 (288)
T ss_pred eeEEecCCCEEEEEEEECCC-------CCEEEEEEecc
Confidence 46799999999999998652 68999998753
No 168
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=90.27 E-value=2 Score=41.36 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++++.|..|+||+|+.++. +| ...+..|++|.....
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~-~~-~~~~~~v~ik~~~~~ 47 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGR-DG-DAVELQVAVKTLPES 47 (277)
T ss_pred eeECCCCCCCcEEEEEEecC-CC-CCCceeEEEEEcCCC
Confidence 36899999999999999752 11 113578999966543
No 169
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=90.25 E-value=1.3 Score=44.14 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=24.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.||.|+.|.||+|+.+.+ |+.||+|+...
T Consensus 1 ~~lg~G~fg~V~~~~~~~~-------~~~~aiK~~~~ 30 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAE-------EKFYAVKVLQK 30 (325)
T ss_pred CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEH
Confidence 3588999999999998752 68999998753
No 170
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=90.23 E-value=1.6 Score=41.50 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=24.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|+-|.||.|+.++ +.+||||...++
T Consensus 10 ~~lg~G~~~~vy~~~~~~--------~~~~aik~~~~~ 39 (256)
T cd05113 10 KELGTGQFGVVKYGKWRG--------QYDVAIKMIKEG 39 (256)
T ss_pred eEecCcccceEEEEEecC--------CCcEEEEEcCCC
Confidence 568999999999998754 367999976544
No 171
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=90.22 E-value=2.8 Score=40.64 Aligned_cols=30 Identities=13% Similarity=0.053 Sum_probs=25.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++.|+-|.||+|+.+++ |+.||||+.++.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~ 30 (279)
T cd05633 1 IIGRGGFGEVYGCRKADT-------GKMYAMKCLDKK 30 (279)
T ss_pred CcccCCCeEEEEEEECCC-------CcEEEEEEEEcc
Confidence 378999999999998652 689999988765
No 172
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=90.21 E-value=0.72 Score=46.40 Aligned_cols=46 Identities=26% Similarity=0.238 Sum_probs=33.3
Q ss_pred HhCCChHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 275 AFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 275 elG~~~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++...++...++ ..+|+.++.|+||+|+.+.+ |+.||||+..+.
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~-------~~~~aiK~~~~~ 51 (343)
T cd07851 5 ELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKT-------GRKVAIKKLSRP 51 (343)
T ss_pred hhccceecccCceEEEEEeccCCceEEEEEEECCC-------CcEEEEEecccc
Confidence 44444444444443 58899999999999999752 689999987653
No 173
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=90.12 E-value=1.1 Score=46.84 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=54.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+.||+|+.|.||+|+.... +....+..||||+.++.....-.
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~--~~~~~~~~vavK~l~~~~~~~~~----------------------------------- 84 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGL--SRSQPVMKVAVKMLKPTARSSEK----------------------------------- 84 (400)
T ss_pred hheecCCCCceEEEEEEccc--CCCCCceEEEEEecCCCCChHHH-----------------------------------
Confidence 36899999999999997431 11223578999998876421100
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCccc--CCCCCCCeEEeecccCccccchhH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVD 424 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~--~~lst~rVLVmE~i~G~~i~~~~~ 424 (455)
-++.+|++.+.++. .+++ |++.+ ..-.....|||||++|-.+.+++.
T Consensus 85 ---~~~~~Ei~~l~~l~----~Hpn--Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 133 (400)
T cd05105 85 ---QALMSELKIMTHLG----PHLN--IVNLLGACTKSGPIYIITEYCFYGDLVNYLH 133 (400)
T ss_pred ---HHHHHHHHHHHhcC----CCCC--eeeEEEEEccCCceEEEEEecCCCcHHHHHH
Confidence 12355655555442 2232 22222 122345689999999998887664
No 174
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=90.09 E-value=1.3 Score=42.93 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=22.7
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
|+.|+.|+||+++.+.. |+.||+|+..
T Consensus 1 lg~G~~g~Vy~~~~~~~-------~~~~a~K~~~ 27 (277)
T cd05607 1 LGKGGFGEVCAVQVKNT-------GKMYACKKLD 27 (277)
T ss_pred CCCCCceEEEEEEEccC-------CcEEEEEEEc
Confidence 57899999999998752 6899999764
No 175
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=90.04 E-value=0.92 Score=43.71 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=26.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+-|.||+|+.+++ |+.||||+....
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~-------~~~~avK~~~~~ 37 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKET-------KEIVAIKKFKDS 37 (287)
T ss_pred EEEecccCCEEEEEEEECCC-------CcEEEEEEEecc
Confidence 35689999999999998752 689999987643
No 176
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=90.01 E-value=2.3 Score=40.48 Aligned_cols=32 Identities=16% Similarity=0.070 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
...++.|+-|.||+|+.+++ ++.|+||.....
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~-------~~~v~~k~~~~~ 44 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLST-------QVRIAIKEIPER 44 (268)
T ss_pred eEEEecCCceEEEEeEecCC-------CcEEEEEEecCC
Confidence 46899999999999998652 689999976543
No 177
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=89.99 E-value=1.6 Score=41.25 Aligned_cols=28 Identities=25% Similarity=0.241 Sum_probs=22.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+-++.|+-|+||+|+.+ |+.||+|...
T Consensus 11 ~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~ 38 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR---------GNKVAVKCIK 38 (256)
T ss_pred eeeecccCCCeEEEEEEc---------CCcEEEEEeC
Confidence 366899999999999874 5889999753
No 178
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=89.93 E-value=2.1 Score=41.07 Aligned_cols=89 Identities=19% Similarity=0.190 Sum_probs=53.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+.|+.|+-|+||+|+.+++ |. .....||+|+..++.. .+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~--~~-~~~~~~aik~~~~~~~----------------------------~~---------- 51 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPE--GE-KVKIPVAIKVLREETS----------------------------PK---------- 51 (279)
T ss_pred ceecCCCCccEEEEEEecC--CC-CcceEEEEEeccCCCC----------------------------HH----------
Confidence 7899999999999998752 31 1124799998765532 00
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
..-++.+|+..+.++. +..-+.+.... .+....++|||++|.++.+++..
T Consensus 52 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~g~L~~~l~~ 101 (279)
T cd05057 52 ANKEILDEAYVMASVD----HPHVVRLLGIC--LSSQVQLITQLMPLGCLLDYVRN 101 (279)
T ss_pred HHHHHHHHHHHHHhCC----CCCcceEEEEE--ecCceEEEEecCCCCcHHHHHHh
Confidence 0112345665555442 11112222222 23678899999999998876543
No 179
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=89.89 E-value=2.1 Score=41.79 Aligned_cols=39 Identities=23% Similarity=0.202 Sum_probs=27.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++++.|.-|+||+|+....-.+...++..||||+..+.
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~ 58 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD 58 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc
Confidence 589999999999999863210111123578999988755
No 180
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=89.88 E-value=2.6 Score=39.77 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=24.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.+|.|+-|.||+|+.. |+.||||+....
T Consensus 11 ~~~ig~g~~g~v~~~~~~---------~~~v~iK~~~~~ 40 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR---------GQKVAVKCLKDD 40 (256)
T ss_pred eeeeecCCCceEEEEEec---------CcEEEEEEeccc
Confidence 467999999999999874 589999976543
No 181
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=89.84 E-value=1.7 Score=43.50 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=25.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+.|.||+|+.+.. |+.||||+..
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~-------~~~~aiK~~~ 35 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHT-------ERIYAMKILN 35 (331)
T ss_pred EEEEeeCCCeEEEEEEECCC-------CCEEEEEEEe
Confidence 36789999999999998752 6899999864
No 182
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=89.78 E-value=1.6 Score=40.52 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=24.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.++.|.-|.||+|.... +|++|+||+...
T Consensus 6 ~~l~~g~~~~v~~~~~~~-------~~~~~~ik~~~~ 35 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKS-------DGKLYVLKEIDL 35 (258)
T ss_pred eeeccCCCeEEEEEEEcC-------CCcEEEEEEeec
Confidence 578999999999999864 268999998644
No 183
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=89.70 E-value=2.3 Score=41.02 Aligned_cols=33 Identities=15% Similarity=0.041 Sum_probs=25.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.++.|+.|+||+|+.... ..+|+.||||+.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~----~~~~~~~avk~~~~ 38 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGG----HDAGKLYAMKVLKK 38 (288)
T ss_pred EEeccCCCceEEEEEEecc----ccCCcEEEEEEEeh
Confidence 5789999999999987531 12368999998653
No 184
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=89.51 E-value=3.7 Score=39.74 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+-|.||+|..++. ++.||+|+..+.
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~ 37 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNT-------GMIFALKTITTD 37 (287)
T ss_pred EEEeccCCceEEEEEEECCC-------CeEEEEEEEecC
Confidence 47889999999999999752 699999986543
No 185
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=89.47 E-value=1.3 Score=44.01 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=26.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|..|.||+|+.+. .|+.||||+....
T Consensus 14 ~~~ig~G~~g~vy~~~~~~-------~~~~vaiK~~~~~ 45 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTL-------TGKIVAIKKVKII 45 (335)
T ss_pred hhcccCCCceeEEEEEECC-------CCCeEEEEEeecc
Confidence 3578999999999999764 2689999987543
No 186
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=89.44 E-value=1.7 Score=41.57 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.|..|+||+|+.+++ |+.|+||+.++.
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~-------~~~v~vK~~~~~ 37 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKAT-------GEIVAIKKFKES 37 (288)
T ss_pred EEEecccCCeeEEEEEeCCC-------CcEEEEehhhhh
Confidence 35689999999999998752 689999988654
No 187
>PRK10345 hypothetical protein; Provisional
Probab=89.40 E-value=1.2 Score=43.08 Aligned_cols=115 Identities=12% Similarity=0.145 Sum_probs=64.7
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHH
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~ 367 (455)
+.++||+|+-+.||. -.+ + +.. +|||.+++-.. ..
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~--~-----~~k-~IKv~~~~~~~-------------------------~~---------- 40 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPE--D-----AQR-CIKIVYHRGDG-------------------------GD---------- 40 (210)
T ss_pred CcceecCCCceEEEE--CCC--C-----cCe-EEEEEeccccc-------------------------hH----------
Confidence 468999999999995 211 2 345 69999875210 00
Q ss_pred HHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCC----e--EEeec--ccCccccchhHHhhhchhhHHHHHHH
Q 012848 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA----V--LVETY--EQGECVSRYVDELQGHERLKSALAHI 439 (455)
Q Consensus 368 l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~r----V--LVmE~--i~G~~i~~~~~~l~~~~~~~~~LA~~ 439 (455)
-++++|.+-+..+...-.+++. ||+.|.-+-|+. | ++||| .+|.++.++++.. ... ........
T Consensus 41 ----~~~~rEi~~l~~L~~~~~~h~n--Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~-e~~~~~~~ 112 (210)
T PRK10345 41 ----KEIRRELKYYAHLSRRLIDWSG--IPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYE-EDVAQLRQ 112 (210)
T ss_pred ----HHHHHHHHHHHHhhccCCCCcc--cceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-ccc-HhHHHHHH
Confidence 0235555555555432223333 666664444442 2 68999 4457777776431 101 11223455
Q ss_pred HHHHHHHhhhccCCCC
Q 012848 440 GTHALLKMLLVPYLNN 455 (455)
Q Consensus 440 g~~aflkmlf~dgFv~ 455 (455)
.++.+++-+..+|.+|
T Consensus 113 ~L~~l~~yLh~~~Ivh 128 (210)
T PRK10345 113 LLKKLKRYLLDNRIVT 128 (210)
T ss_pred HHHHHHHHHHHCCEee
Confidence 5666677777777776
No 188
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=89.35 E-value=1.6 Score=44.68 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=25.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.+ |+.||||+..
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~ 77 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSS-------KQVYAMKLLS 77 (370)
T ss_pred EEEEeeCCCEEEEEEEECCC-------CCEEEEEEEE
Confidence 46799999999999998752 6899999874
No 189
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=89.34 E-value=2 Score=40.35 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=17.3
Q ss_pred CCCeEEeecccCccccchhHH
Q 012848 405 HPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 405 t~rVLVmE~i~G~~i~~~~~~ 425 (455)
...+|+|||++|.++.+++..
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~ 93 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHR 93 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHh
Confidence 466899999999999887643
No 190
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=89.27 E-value=2.8 Score=41.67 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=22.7
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
||.|+.|.||+|+.+.. |+.||||+..
T Consensus 1 lG~G~~g~Vy~~~~~~~-------~~~~avK~~~ 27 (330)
T cd05586 1 IGKGTFGQVYQVRKKDT-------RRIYAMKVLS 27 (330)
T ss_pred CCCCCceEEEEEEECCC-------CCEEEEEEEe
Confidence 57899999999998752 6899999853
No 191
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=89.26 E-value=2.6 Score=39.62 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=24.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
++++.|+.|+||+|+.+.+ |++||||...
T Consensus 6 ~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~ 34 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTD-------GKQYVIKKLN 34 (257)
T ss_pred EEecCCCCeEEEEEEEcCC-------CcEEEEEEEe
Confidence 5788999999999998752 6899999753
No 192
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=89.25 E-value=2.2 Score=41.52 Aligned_cols=40 Identities=25% Similarity=0.313 Sum_probs=26.6
Q ss_pred ccccccCcceEEEeEecccC--C--C---CCcCCeEEEEEeeCCCcc
Q 012848 290 APVASGSIAQVHRASLRFRY--P--G---QKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~--~--G---~~~~G~~VAVKVqrPgV~ 329 (455)
+.||.|+-|.||+++....- . + ....+..||||+.+++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~ 57 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT 57 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC
Confidence 56999999999999875310 0 0 001234699999988753
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=89.16 E-value=1.5 Score=42.86 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=23.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.++.|+-|.||+|+.+. .|+.|+||+..
T Consensus 26 ~~lg~g~~~~v~~~~~~~-------~~~~v~ik~~~ 54 (296)
T cd06654 26 EKIGQGASGTVYTAMDVA-------TGQEVAIRQMN 54 (296)
T ss_pred EEecCCCCeEEEEEEECC-------CCcEEEEEEEe
Confidence 568999999999998754 26899999753
No 194
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=89.13 E-value=2.7 Score=40.58 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=27.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
...++.|+.|+||+|+.+...+| ..+..||||+.+.+.
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~--~~~~~~aiK~~~~~~ 47 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPY--EPFTMVAVKMLKEEA 47 (288)
T ss_pred cccccccccccEEEEEEcccCCC--CcceeEEEEecCCCc
Confidence 46889999999999997532222 235899999887653
No 195
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=89.09 E-value=2 Score=43.04 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=25.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+.|.||+++.+.. ++.||||+..
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~-------~~~~aiK~~~ 35 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNA-------DKVFAMKILN 35 (332)
T ss_pred EEEEEeCCCeEEEEEEECCC-------CCEEEEEEEe
Confidence 46789999999999999752 6899999863
No 196
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=89.03 E-value=2 Score=41.00 Aligned_cols=31 Identities=23% Similarity=0.124 Sum_probs=25.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.+..|.||+|+.+.+ |+.||||+.+..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~-------~~~~~vK~~~~~ 36 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRET-------GETVALKKVALR 36 (286)
T ss_pred eecccCCCcEEEEEEECCC-------CceEEEEEEEcc
Confidence 5689999999999998652 689999986543
No 197
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=89.02 E-value=1.3 Score=44.01 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=25.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.|+.|..|.||+|+.+.. |+.||||+.+.
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~ 36 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKAT-------GDIYAMKVMKK 36 (330)
T ss_pred EEEEEeccCEEEEEEEECCC-------CCEEEEEEEEH
Confidence 46789999999999998752 68999998753
No 198
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=89.00 E-value=3.6 Score=39.47 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=25.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|+.|+||+|..+... ....++.||||+.+.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~--~~~~~~~~aik~~~~ 46 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVV--KDEPETRVAIKTVNE 46 (277)
T ss_pred eeeeccccCCeEEEEEeccCC--CCCceeEEEEEeccc
Confidence 467899999999999875311 112357899997654
No 199
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=88.96 E-value=2.7 Score=40.66 Aligned_cols=20 Identities=10% Similarity=0.213 Sum_probs=16.4
Q ss_pred CCCeEEeecccCccccchhH
Q 012848 405 HPAVLVETYEQGECVSRYVD 424 (455)
Q Consensus 405 t~rVLVmE~i~G~~i~~~~~ 424 (455)
....|||||++|-.+.+++.
T Consensus 89 ~~~~lv~ey~~~g~L~~~l~ 108 (274)
T cd05076 89 SENIMVEEFVEHGPLDVCLR 108 (274)
T ss_pred CceEEEEecCCCCcHHHHHH
Confidence 45789999999999877653
No 200
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=88.89 E-value=3.3 Score=40.58 Aligned_cols=29 Identities=21% Similarity=0.083 Sum_probs=24.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.++.|+-|.||+|+.+.+ |+.||||+..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~-------~~~vaiK~~~ 53 (297)
T cd06656 25 EKIGQGASGTVYTAIDIAT-------GQEVAIKQMN 53 (297)
T ss_pred eeeccCCCeEEEEEEECCC-------CCEEEEEEEe
Confidence 5699999999999997642 6899999753
No 201
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=88.58 E-value=4.9 Score=38.76 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=26.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.|..|+||.|+.... + ...|+.||||+.++..
T Consensus 10 ~~lg~g~~g~v~~~~~~~~--~-~~~~~~va~K~~~~~~ 45 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPE--G-DNTGEQVAVKSLKPES 45 (284)
T ss_pred eecCCCCceeEEEEEEccC--C-CCccceEEEEEcCccc
Confidence 3589999999999987421 1 1236899999887664
No 202
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=88.44 E-value=3.6 Score=39.59 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=24.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.|+.|+-|.||+|+.+.. |+.||+|+.+-
T Consensus 7 ~~ig~g~~g~v~~~~~~~~-------~~~~a~k~~~~ 36 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPT-------GVTMAMKEIRL 36 (286)
T ss_pred hhhcccCCeEEEEEEEcCC-------CcEEEEEEeec
Confidence 5678999999999998642 68999997653
No 203
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=88.33 E-value=0.66 Score=46.65 Aligned_cols=62 Identities=18% Similarity=0.183 Sum_probs=42.1
Q ss_pred HHhCCChHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc-cc----chHhHHHHHHHH
Q 012848 274 RAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-GE----SIRRDFVIINLA 342 (455)
Q Consensus 274 ~elG~~~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV-~~----~i~~DL~il~~l 342 (455)
++.++.+.++...|+ .++|+.|+-|.||+|+.+. .|+.||||+.+... .+ .+..++.+++.+
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l 71 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKR-------TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM 71 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCC-------CCcEEEEEEecCccccccchhHHHHHHHHHHhc
Confidence 455665555555564 6899999999999999764 26899999876432 22 234455555443
No 204
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=88.22 E-value=2.6 Score=49.70 Aligned_cols=121 Identities=18% Similarity=0.192 Sum_probs=77.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
...||.|--|-||+|++.+. +|... ...||||...++-. .
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~-~~~~~-~~~vaiK~l~~~~~--------------------------------------~ 736 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDV-PGSVS-PIQVAVKSLKRLSS--------------------------------------E 736 (1025)
T ss_pred eeeeccccccceEEEEEecC-CCCcc-ceEEEEEeccccCC--------------------------------------H
Confidence 47899999999999999863 44211 35588886554421 1
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCe-EeCcccCCCCCCCeEEeecccCccccchhHHhh-----hchhhHHHHHHHHHH
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ-----GHERLKSALAHIGTH 442 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V-~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~-----~~~~~~~~LA~~g~~ 442 (455)
.++.||-+||.+|..|.+ ++| +.=-+-.+ .++..+++||++|--+..|+++-. ....--++|....++
T Consensus 737 ~~~~~Fl~Ea~~m~~f~H-----pNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 737 QEVSDFLKEALLMSKFDH-----PNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred HHHHHHHHHHHHHhcCCC-----cceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 345788999999997742 221 11111112 678899999999999988886531 122233556555544
Q ss_pred H--HHHhhhccCCCC
Q 012848 443 A--LLKMLLVPYLNN 455 (455)
Q Consensus 443 a--flkmlf~dgFv~ 455 (455)
+ -++=|-+.+|||
T Consensus 811 vA~G~~YLe~~~fvH 825 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVH 825 (1025)
T ss_pred HhhhhHHHHhCCCcC
Confidence 3 344466667776
No 205
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=88.19 E-value=4.5 Score=38.49 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=23.5
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-||.|+-|+||+|+..+. .....|+||..+..
T Consensus 2 ~lg~G~fg~v~~~~~~~~-----~~~~~~~~k~~~~~ 33 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRG-----MSKARVVVKELRAS 33 (269)
T ss_pred cCCccCCceEEEEEEecC-----CCCeEEEEeecCcc
Confidence 378999999999987642 12468999976544
No 206
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=88.18 E-value=2.8 Score=40.27 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=22.8
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
|+.|..|.||+|..+. .|+.||||+.+.
T Consensus 1 lg~g~~g~vy~~~~~~-------~~~~~~ik~~~~ 28 (277)
T cd05577 1 LGKGGFGEVCACQVKA-------TGKMYACKKLDK 28 (277)
T ss_pred CCCCCceeEEEEEEcC-------CCcEEEEEEEeh
Confidence 5788999999998765 268999998764
No 207
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=88.12 E-value=4.4 Score=39.10 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=25.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.++.|+.|.||+|+.... ..+|+.||+|+...
T Consensus 6 ~~lg~G~~g~v~~~~~~~~----~~~g~~~aiK~~~~ 38 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSG----HDSGKLYAMKVLKK 38 (290)
T ss_pred eeeccCCcceEEEEEeccC----CCCCceEEEEEeeh
Confidence 5688999999999987531 12368999998643
No 208
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=88.08 E-value=1 Score=48.08 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=72.5
Q ss_pred HHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHc
Q 012848 268 TKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347 (455)
Q Consensus 268 v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~ 347 (455)
++.+|.+-+.+. ++.+++ -.|.+|==|-||.|+-.+ |..+||||=.-.|---=.+|=.+ ..=.+
T Consensus 132 TrmvLfrll~RG---~i~~in-GCiSTGKEANVYHat~~d--------G~~~AIKIYKTSILvFKDRdRYV----~GEfR 195 (520)
T KOG2270|consen 132 TRMVLFRLLNRG---VIVEIN-GCISTGKEANVYHATEED--------GSEFAIKIYKTSILVFKDRDRYV----SGEFR 195 (520)
T ss_pred HHHHHHHHHhcC---eeeecc-cccccCccceeEeeecCC--------CceEEEEEEeeeEEEEechhhhc----cceee
Confidence 455555555432 233444 345566668899998765 68899999887775444444221 10001
Q ss_pred cccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccC
Q 012848 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416 (455)
Q Consensus 348 ~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G 416 (455)
|--+.-.-+...+|.-.+ ..|-+|+.|... ..+.+|+|+ +-..+||||+|+-+
T Consensus 196 FRhgyck~NPRKMVk~WA---------EKE~RNLkRl~~-----aGIP~PePI--lLk~hVLVM~FlGr 248 (520)
T KOG2270|consen 196 FRHGYCKHNPRKMVKTWA---------EKEMRNLKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGR 248 (520)
T ss_pred eecccccCCcHHHHHHHH---------HHHHHHHHHHHh-----cCCCCCCce--eeecceEeeeeccC
Confidence 111111223445555443 568899998864 358888888 89999999999974
No 209
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=88.05 E-value=1.8 Score=44.42 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=27.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.||.|+-|.||+|+.... .....+..||||+.++..
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~--~~~~~~~~vavK~l~~~~ 77 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGL--FKSDAAMTVAVKMLKPSA 77 (375)
T ss_pred hheecCCccceEEEEEEecc--ccCccceeEEEEeccCCc
Confidence 57899999999999985310 011235799999987653
No 210
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=88.04 E-value=3.3 Score=38.76 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=24.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.++++.++.|.||+|+.+.+ |..||+|..
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~ 33 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSD-------SEHCVIKEI 33 (257)
T ss_pred EEEecCCCcceEEEEEEcCC-------CceEEEEEe
Confidence 46799999999999999762 688999964
No 211
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=88.04 E-value=2.7 Score=39.84 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=24.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.|+.|+.|+||+|+.+.+ |+.|+||...
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~-------~~~~~vK~~~ 36 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLD-------GVPVALKKVQ 36 (267)
T ss_pred hhhhcccCCeEEEEEeecCC-------CceEEEEeee
Confidence 46799999999999998642 6899999543
No 212
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=87.98 E-value=4 Score=40.66 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=25.7
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.||.|+-|.||+|+.+.. |+.||||+.++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~ 32 (316)
T cd05619 2 MLGKGSFGKVFLAELKGT-------NQFFAIKALKKDV 32 (316)
T ss_pred eeeeCCCEEEEEEEECCC-------CCEEEEEEEEHHH
Confidence 578999999999998752 6899999987643
No 213
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=87.81 E-value=3.6 Score=38.92 Aligned_cols=30 Identities=27% Similarity=0.311 Sum_probs=24.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.++.|+-|.||+|+.+.+ |+.||||+.+
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~ 36 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLD-------RKPVALKKVQ 36 (267)
T ss_pred eeeeccCCCeeEEEEEEeCC-------CCEEEEEEee
Confidence 46789999999999998752 6899999644
No 214
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=87.80 E-value=2.8 Score=40.69 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.|+.+..|.||+|+.+.. |+.||||+.++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~-------~~~~aiK~~~~ 36 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGS-------GKYYALKILSK 36 (290)
T ss_pred EEEeecCCCeEEEEEEEcCC-------CCEEEEEEEEH
Confidence 36789999999999998752 68999998764
No 215
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=87.72 E-value=5 Score=37.95 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=23.4
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++.|.-|.||+|+... .|+.||||+.++.
T Consensus 1 lg~g~~~~v~~~~~~~-------~~~~~~iK~~~~~ 29 (262)
T cd05572 1 LGVGGFGRVELVKVKS-------KNRTFALKCVKKR 29 (262)
T ss_pred CCCCCceEEEEEEECC-------CCcEEEEEEEehh
Confidence 5788899999999864 2689999988643
No 216
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=87.68 E-value=2.9 Score=39.43 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=23.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|+.|+||+++.. |+.||||+.+.
T Consensus 11 ~~~lg~g~~g~v~~~~~~---------~~~~~iK~~~~ 39 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYT---------GQKVAVKNIKC 39 (254)
T ss_pred eeeeccCCCCceEecccC---------CCceEEEeecC
Confidence 478899999999998753 58899997643
No 217
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=87.64 E-value=2.7 Score=40.79 Aligned_cols=76 Identities=24% Similarity=0.289 Sum_probs=52.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
.|+..|--.++|+.+. + |++++||+..++... +
T Consensus 2 ~~~~~G~tn~~y~~~~-~--------~~~~vlR~~~~~~~~------------------------~-------------- 34 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEH-P--------GISFVWRPQSPVCKA------------------------L-------------- 34 (256)
T ss_pred CcCCCcCcCCeEEEEe-C--------CccEEEeeCCccccc------------------------c--------------
Confidence 4677888899998873 1 578999975554210 0
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~ 421 (455)
.+|..+|.++++...+. .+ .|+++ ...+..++|||++|.++++
T Consensus 35 -~~~r~~E~~~l~~l~~~-----g~-~P~~i--~~~~~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 35 -GVDRQREYQILQALSAL-----GL-APKPI--LVNEHWLLVEWLEGEVITL 77 (256)
T ss_pred -cCcHHHHHHHHHHHHhc-----CC-CCceE--EEeCCEEEEEeccCccccc
Confidence 14667788777776642 23 58888 4556899999999998864
No 218
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=87.56 E-value=4.6 Score=39.71 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=27.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|.-|+||+|+.... .....+..||||+.+...
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~--~~~~~~~~vavK~~~~~~ 77 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGL--SKSDAVMKVAVKMLKPTA 77 (302)
T ss_pred cceeeccCCeeEEEEEEecC--CCCCceeEEEEEecCccC
Confidence 57899999999999986421 112235789999866553
No 219
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=87.53 E-value=1.3 Score=42.73 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=52.7
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ 370 (455)
-+|=|--+-||.+..+ |.+||+|||+++-.. +
T Consensus 29 ~L~KG~~s~Vyl~~~~---------~~~~a~Kvrr~ds~r-------------------~-------------------- 60 (201)
T COG2112 29 ELAKGTTSVVYLGEWR---------GGEVALKVRRRDSPR-------------------R-------------------- 60 (201)
T ss_pred hhhcccccEEEEeecc---------CceEEEEEecCCcch-------------------h--------------------
Confidence 3455555668888775 479999999998421 0
Q ss_pred hcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhH
Q 012848 371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD 424 (455)
Q Consensus 371 ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~ 424 (455)
++..||+-++...- .-..|++| +.++..+.|||++|.++.+..+
T Consensus 61 --~l~kEakiLeil~g------~~~~p~vy--~yg~~~i~me~i~G~~L~~~~~ 104 (201)
T COG2112 61 --NLEKEAKILEILAG------EGVTPEVY--FYGEDFIRMEYIDGRPLGKLEI 104 (201)
T ss_pred --hHHHHHHHHHHhhh------cCCCceEE--EechhhhhhhhhcCcchhhhhh
Confidence 23556665554331 22368888 7888999999999999987643
No 220
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=87.46 E-value=1.8 Score=43.55 Aligned_cols=37 Identities=27% Similarity=0.252 Sum_probs=27.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+.|.||+|+.... +....|+.||||+.+.+
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~--~~~~~~~~vavK~~~~~ 48 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGI--DKTATCRTVAVKMLKEG 48 (343)
T ss_pred cccccCCccceEEEEeeccC--CccccceeEEEEEeccC
Confidence 57899999999999985320 11234689999988765
No 221
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=87.31 E-value=4.1 Score=40.10 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+.|.||+|+.+.+ |+.||+|+.+.+.
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~-------~~~~a~k~~~~~~ 38 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPS-------GLIMARKLIHLEI 38 (308)
T ss_pred EeeccCCCCeEEEEEEEcCC-------CeEEEEEEecccc
Confidence 45689999999999987652 6899999876553
No 222
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=87.17 E-value=3.4 Score=39.79 Aligned_cols=31 Identities=23% Similarity=0.149 Sum_probs=25.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++++.|.-|.||+|+... .|+.||||+...+
T Consensus 7 ~~lg~g~~~~v~~~~~~~-------~~~~~aiK~~~~~ 37 (279)
T cd06619 7 EILGHGNGGTVYKAYHLL-------TRRILAVKVIPLD 37 (279)
T ss_pred eeeccCCCeEEEEEEEcC-------CCcEEEEEEEecC
Confidence 578999999999998764 2689999977544
No 223
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=87.11 E-value=7.3 Score=36.94 Aligned_cols=31 Identities=16% Similarity=-0.032 Sum_probs=25.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+-++.|..|.||+|+.+++ |+.||||+.+.
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~-------~~~v~ik~~~~ 37 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADT-------GRELAVKQVQF 37 (265)
T ss_pred eeEEecCCceEEEEEEEcCC-------CcEEEEEEeec
Confidence 45688999999999998752 68999997653
No 224
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=87.10 E-value=3.1 Score=39.06 Aligned_cols=32 Identities=25% Similarity=0.170 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++++.|+.|.||+|+.+.+ ++.++||+....
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~ 39 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIAT-------GELVAIKVIKLE 39 (262)
T ss_pred EEEecCCCceEEEEeEecCC-------CCEEEEEEEEcC
Confidence 47899999999999998652 588999998644
No 225
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=87.02 E-value=2.3 Score=43.27 Aligned_cols=30 Identities=13% Similarity=0.112 Sum_probs=25.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+.|.||+|+.+.+ |+.||||+..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~ 35 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDT-------GKIYAMKTLL 35 (377)
T ss_pred eEEEeecCCEEEEEEEECCC-------CCEEEEEEEE
Confidence 36789999999999988752 6899999864
No 226
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=86.96 E-value=4.6 Score=38.00 Aligned_cols=29 Identities=17% Similarity=0.011 Sum_probs=24.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.++.|+.|+|++++.+.+ |+.||+|+.+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~-------~~~~~iK~~~ 34 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNS-------DQKYAMKEIR 34 (255)
T ss_pred EEeeccCCeEEEEEEEcCC-------CceEEEEEEE
Confidence 6789999999999987652 6899999763
No 227
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=86.92 E-value=1.1 Score=51.29 Aligned_cols=147 Identities=17% Similarity=0.299 Sum_probs=93.3
Q ss_pred hhcCCCCCCHHH---HHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccch
Q 012848 256 LHSKAPEHSFAY---TKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332 (455)
Q Consensus 256 LqD~vpp~~~~~---v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i 332 (455)
...-+.|+.+++ +...+.+|+. ...|+ | ++-||+|..|-|++|+||. +|+ +-..||||-.+-|-.+.
T Consensus 603 ~k~YiDP~TYEDPnqAvreFakEId--~s~i~--I-e~VIGaGEFGEVc~GrLk~--pgk--re~~VAIKTLK~Gytek- 672 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVREFAKEID--PSCVK--I-EKVIGAGEFGEVCSGRLKL--PGK--REITVAIKTLKAGYTEK- 672 (996)
T ss_pred ceeecCCccccCccHHHHHhhhhcC--hhheE--E-EEEEecccccceecccccC--CCC--cceeEEEeeeccCccHH-
Confidence 455566776654 3333334432 22332 2 5789999999999999997 452 24789999776664322
Q ss_pred HhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCe-EeCcccCCCCCCCeEEe
Q 012848 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVE 411 (455)
Q Consensus 333 ~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V-~vP~~~~~lst~rVLVm 411 (455)
+..||-.||.-|-.|- +++| +.--|+ --+.+=++++
T Consensus 673 -------------------------------------qrrdFL~EAsIMGQFd-----HPNIIrLEGVV-Tks~PvMIiT 709 (996)
T KOG0196|consen 673 -------------------------------------QRRDFLSEASIMGQFD-----HPNIIRLEGVV-TKSKPVMIIT 709 (996)
T ss_pred -------------------------------------HHhhhhhhhhhcccCC-----CCcEEEEEEEE-ecCceeEEEh
Confidence 3356677777666552 3443 222222 2456678899
Q ss_pred ecccCccccchhHHhhhchhhHHHH-HHHHHHHHHHhhhccCCCC
Q 012848 412 TYEQGECVSRYVDELQGHERLKSAL-AHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 412 E~i~G~~i~~~~~~l~~~~~~~~~L-A~~g~~aflkmlf~dgFv~ 455 (455)
||++.-+++.|+..-+++=..-+.+ --+|+-+-+|-|=+.|+||
T Consensus 710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVH 754 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVH 754 (996)
T ss_pred hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchh
Confidence 9999999999987655431111222 2457788888888888887
No 228
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=86.88 E-value=4 Score=39.73 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=26.1
Q ss_pred cccccccCcceEEEeEecccCC---------CCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYP---------GQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~---------G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+.|.||++..++... .....+..||||+.+...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~ 58 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA 58 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC
Confidence 4579999999999986542100 011124679999887653
No 229
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=86.86 E-value=4.4 Score=39.71 Aligned_cols=40 Identities=23% Similarity=0.145 Sum_probs=27.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.++||.|.-|.||+|+......+...++..||+|+.+++.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~ 62 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA 62 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC
Confidence 5789999999999998643111111234689999988763
No 230
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=86.79 E-value=3.3 Score=39.29 Aligned_cols=80 Identities=15% Similarity=0.086 Sum_probs=53.7
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHH
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~ 367 (455)
+-+|+..|...+||+-+..+ | +++.+++|+-+++-..
T Consensus 2 ~i~~l~gG~tN~~~~v~~~~---~---~~~~~vlR~~~~~~~~------------------------------------- 38 (235)
T cd05157 2 TFKRFTGGITNKLVKVSNKE---D---NQDAVLVRVYGNKTEL------------------------------------- 38 (235)
T ss_pred eEEEcCCcccceEEEEEcCC---C---CCCeEEEEEccCCccc-------------------------------------
Confidence 34688899999999887642 0 1468999987665210
Q ss_pred HHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc
Q 012848 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 368 l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~ 421 (455)
-+|-.+|.+.+....+. .+ .|+++. +.+..++|||++|.+++.
T Consensus 39 ---~~d~~~E~~~~~~l~~~-----gl-~P~v~~--~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 39 ---IIDRERELRIHKLLSKH-----GL-APKLYA--TFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred ---eecHHHHHHHHHHHHhC-----CC-CCeEEE--EeCCcEEEEeeCCCcCCH
Confidence 02445677766665532 33 688863 455779999999988763
No 231
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=86.75 E-value=4.9 Score=38.36 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=23.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+-++.|+-|.||+|+..+ +..||||+.++
T Consensus 12 ~~lg~g~~~~v~~~~~~~--------~~~valK~~~~ 40 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNG--------TTRVAIKTLKP 40 (262)
T ss_pred eecCCCCCCcEEEEEecC--------CceEEEEeccc
Confidence 358999999999998754 35799998764
No 232
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=86.75 E-value=6.1 Score=37.64 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=24.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+-++.|+-|.||+|+.+.. ++..+.+.|++|+..
T Consensus 11 ~~lg~g~~g~v~~~~~~~~--~~~~~~~~~~~k~~~ 44 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGI--EEEGGETLVLVKALQ 44 (275)
T ss_pred eeecccceeEEEEEEeccC--CcCCCcceEEEEccC
Confidence 4589999999999998752 212235789999654
No 233
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=86.67 E-value=6.5 Score=36.73 Aligned_cols=30 Identities=30% Similarity=0.239 Sum_probs=24.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.++++..|+||+|+.+++ |+.|++|+..
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~-------~~~~~~k~~~ 37 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKET-------GQVVAIKVVP 37 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCC-------CcEEEEEEee
Confidence 35689999999999998752 5899999743
No 234
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=86.67 E-value=6.6 Score=37.99 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=25.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|+.|.||+|+.+.. |+.|++|+....
T Consensus 18 ~~lg~g~~g~vy~~~~~~~-------~~~~~~k~~~~~ 48 (292)
T cd06644 18 GELGDGAFGKVYKAKNKET-------GALAAAKVIETK 48 (292)
T ss_pred heecCCCCeEEEEEEECCC-------CceEEEEEeccC
Confidence 4589999999999998752 689999987543
No 235
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=86.57 E-value=3.2 Score=41.65 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeCccc--CC-----CCCCCeEEeecccCc-cccchhHHh-h--hchhhHHHHHHHHHH
Q 012848 374 LAREAAHLSRFIYNFRRWKDVSFPKPV--YP-----LVHPAVLVETYEQGE-CVSRYVDEL-Q--GHERLKSALAHIGTH 442 (455)
Q Consensus 374 fr~EA~nl~rf~~~f~~~~~V~vP~~~--~~-----lst~rVLVmE~i~G~-~i~~~~~~l-~--~~~~~~~~LA~~g~~ 442 (455)
..+|.+++.++.+. .|.+|+|+ .+ ......||||+++|. ++.++.... . ........+...+.+
T Consensus 75 a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 75 ADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 47889999988764 67788883 21 134588999999997 787775421 1 111223344444433
Q ss_pred HHHHhhhccCCCC
Q 012848 443 ALLKMLLVPYLNN 455 (455)
Q Consensus 443 aflkmlf~dgFv~ 455 (455)
++..|-..|++|
T Consensus 150 -~i~~LH~~Gi~H 161 (268)
T PRK15123 150 -MVRDMHAAGINH 161 (268)
T ss_pred -HHHHHHHCcCcc
Confidence 455566777766
No 236
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=86.54 E-value=3.1 Score=42.72 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=25.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.+ |+.||+|+..
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~-------~~~~aiK~~~ 77 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSS-------QKVYAMKLLS 77 (370)
T ss_pred EEEEEecCCeEEEEEEECCC-------CCEEEEEEEE
Confidence 35699999999999998752 6899999864
No 237
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=86.39 E-value=5.2 Score=39.49 Aligned_cols=30 Identities=23% Similarity=0.108 Sum_probs=24.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.|+.|+.|+||+|+.+.+ |+.||||+.+.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~ 35 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHT-------GEKVAIKKIND 35 (338)
T ss_pred EEEeecCCeEEEEEEECCC-------CCEEEEEEech
Confidence 5689999999999998652 68999997653
No 238
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=86.36 E-value=4.4 Score=38.45 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|..|.||+|..+.. + ++.||||+.....
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~--~----~~~~avk~~~~~~ 38 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNN--G----QNLLALKEINVHN 38 (269)
T ss_pred hhhhcCCCCceEEEEEEcCC--C----CceeeeeEeeccc
Confidence 35689999999999998751 2 5899999876543
No 239
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=86.30 E-value=4.2 Score=38.85 Aligned_cols=31 Identities=19% Similarity=0.151 Sum_probs=24.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.|+.|+.|.||+|+.++. |+.|+||.....
T Consensus 5 ~~ig~g~~g~v~~~~~~~~-------~~~~~ik~~~~~ 35 (283)
T cd07830 5 KQLGDGTFGSVYLARNKET-------GELVAIKKMKKK 35 (283)
T ss_pred eeeccCCceEEEEEEECCC-------CcEEEEEEehhh
Confidence 4689999999999999752 689999965443
No 240
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=86.26 E-value=4.3 Score=38.62 Aligned_cols=32 Identities=16% Similarity=-0.056 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.+..|.||+|+.+.+ |+.||+|+.+.+
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~-------~~~~~ik~~~~~ 38 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADT-------GRELAVKQVPFD 38 (264)
T ss_pred eeeEccCCCeEEEEEEEcCC-------CCEEEEEEEecC
Confidence 46889999999999998652 689999976443
No 241
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=86.18 E-value=11 Score=37.06 Aligned_cols=30 Identities=27% Similarity=0.179 Sum_probs=24.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
..|+.|+-|+||+|+.+. .|+.||||+...
T Consensus 27 ~~ig~g~~g~v~~~~~~~-------~~~~v~iK~~~~ 56 (297)
T cd06659 27 IKIGEGSTGIVCIAREKH-------SGRQVAVKMMDL 56 (297)
T ss_pred hhcCCCCceeEEEEEEcC-------CCCEEEEEEEEe
Confidence 368999999999999864 268999998643
No 242
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=86.10 E-value=5.6 Score=37.83 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=27.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+-|.||+|..+.... ...+..||||..+.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~--~~~~~~~aik~~~~~ 47 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVK--GEPETRVAIKTVNEN 47 (277)
T ss_pred EeEecCCCCceEEEEEEeccCC--CCcceeEEEEecCCc
Confidence 4679999999999999975211 123589999986543
No 243
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=85.99 E-value=4.9 Score=38.80 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=25.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.|+.|+-|.||+|+.+.+ |+.||||+...
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~-------~~~~~iK~~~~ 40 (291)
T cd07870 10 LEKLGEGSYATVYKGISRIN-------GQLVALKVISM 40 (291)
T ss_pred EEEEEecCCEEEEEEEEcCC-------CcEEEEEEecc
Confidence 46789999999999998752 68999998653
No 244
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=85.83 E-value=1.9 Score=42.89 Aligned_cols=37 Identities=27% Similarity=0.188 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+.|.||+|+.... ++...++.||||+..++
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~--~~~~~~~~vavK~~~~~ 48 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGI--DKKSSCNTVAVKMLKEG 48 (338)
T ss_pred eeEeccCCcceEEEEEEecc--CCcccchhhheeccccc
Confidence 46799999999999986321 11223678999987654
No 245
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=85.82 E-value=3.4 Score=40.86 Aligned_cols=33 Identities=18% Similarity=0.074 Sum_probs=24.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.|+.|+.|.||+++-... ...|+.||||+.+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~----~~~~~~~aiK~~~~ 34 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITG----PDAGQLYAMKVLKK 34 (318)
T ss_pred ceeeeCCCEEEEEEEEecc----CCCCCEEEEEEEEH
Confidence 4688999999999876421 12369999998753
No 246
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=85.70 E-value=4.6 Score=38.41 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=26.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.+..|.||+|+... +|+.|++|...+..
T Consensus 5 ~~i~~g~~~~v~~~~~~~-------~~~~~~ik~~~~~~ 36 (283)
T cd05118 5 GKIGEGTYGVVYKARDKL-------TGEIVAIKKIKLRF 36 (283)
T ss_pred eeeecCCCceEEEEEcCC-------CCcEEEEEEecccc
Confidence 468899999999999864 26899999876654
No 247
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=85.57 E-value=5.5 Score=39.04 Aligned_cols=28 Identities=21% Similarity=0.096 Sum_probs=23.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
+.++.|+.|.||+|+-.. .|+.|+||..
T Consensus 25 ~~lg~g~~g~vy~~~~~~-------~~~~v~iK~~ 52 (296)
T cd06655 25 EKIGQGASGTVFTAIDVA-------TGQEVAIKQI 52 (296)
T ss_pred EEEecCCCeEEEEEEEcC-------CCcEEEEEEE
Confidence 579999999999998754 2689999975
No 248
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=85.56 E-value=4.3 Score=40.85 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=29.1
Q ss_pred hhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 282 eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++..+. .+.||.|+-|.||+|.-.. .|+.||||+....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~ 53 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAV-------LDRNVAIKKLSRP 53 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecC-------CCceEEEEEeCCc
Confidence 3444443 4789999999999998754 2689999986543
No 249
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=85.52 E-value=6.9 Score=37.61 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=25.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.++.|+.|+||+|+.... | ...++.|+||...+
T Consensus 11 ~~lg~g~~g~vy~~~~~~~--~-~~~~~~~~ik~~~~ 44 (283)
T cd05090 11 EELGECAFGKIYKGHLYLP--G-MDHAQLVAIKTLKD 44 (283)
T ss_pred eeccccCCcceEEEEEecC--C-CCCcceEEEEeccC
Confidence 6789999999999997532 1 12368999997653
No 250
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=85.46 E-value=5.2 Score=38.88 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=25.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.|+.|+.|+||+|..+.+ |+.||||...+.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~-------~~~~avK~~~~~ 36 (285)
T cd05630 6 RVLGKGGFGEVCACQVRAT-------GKMYACKKLEKK 36 (285)
T ss_pred EEeecCCCeEEEEEEEcCC-------CceEEEEEEehh
Confidence 5689999999999998752 689999976554
No 251
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=85.35 E-value=3.9 Score=43.19 Aligned_cols=118 Identities=16% Similarity=0.013 Sum_probs=69.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+-+|-|.-|+||+++-+.+ |+++|+|+........-.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~t-------g~~~A~K~i~k~~~~~~~------------------------------------ 77 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKST-------GKEVACKVIPKRKLRGKE------------------------------------ 77 (382)
T ss_pred hhhCCCCceEEEEEEecCC-------CceeEEEEeehhhccccc------------------------------------
Confidence 7899999999999999863 699999986543211100
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf 449 (455)
..-|.++|.+.+++... ...-|.++..+ +-...-.||||+++|-.+-|.+-...-.+.....+....++++-. +-
T Consensus 78 ~~~~v~~Ev~il~~l~~---hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~-lH 152 (382)
T KOG0032|consen 78 DREDVRREVAILQQLSG---HPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKY-LH 152 (382)
T ss_pred cHHHHHHHHHHHHhccC---CCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHH-HH
Confidence 12244666666665432 22246777765 344456899999998766554322101222233445555554333 23
Q ss_pred ccCCCC
Q 012848 450 VPYLNN 455 (455)
Q Consensus 450 ~dgFv~ 455 (455)
..|.||
T Consensus 153 ~~gvvH 158 (382)
T KOG0032|consen 153 SLGVVH 158 (382)
T ss_pred hCCcee
Confidence 345444
No 252
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=85.17 E-value=5 Score=38.69 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=27.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
-++++.|+-|.||+|+.+.+ |+.||||...++.
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~-------~~~~~iK~~~~~~ 42 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLT-------GQLVALKEIRLEH 42 (291)
T ss_pred EEEEeecCCeEEEEEEEcCC-------CcEEEEEEEeccc
Confidence 37899999999999998652 6899999876543
No 253
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=85.06 E-value=4.7 Score=39.39 Aligned_cols=29 Identities=21% Similarity=0.029 Sum_probs=23.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
-+.+++|+-|-||+|..+.+ |+.|++|+.
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~-------~~~v~iK~~ 52 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVAT-------GQEVAIKQM 52 (293)
T ss_pred eeEecCCCCeEEEEEEEcCC-------CCEEEEEEe
Confidence 36799999999999987541 588999975
No 254
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=85.06 E-value=4.4 Score=38.74 Aligned_cols=30 Identities=23% Similarity=0.184 Sum_probs=24.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.++.|..|+||+|+.++. |+.||||+...
T Consensus 7 ~~lg~g~~~~vy~~~~~~~-------~~~~~iK~~~~ 36 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKET-------GQIVAIKKFLE 36 (286)
T ss_pred eeeccCCCeEEEEEEECCC-------CCEEEEEeHhh
Confidence 6789999999999998752 68999997543
No 255
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=84.96 E-value=3.3 Score=41.84 Aligned_cols=32 Identities=31% Similarity=0.163 Sum_probs=26.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+-|.||+|+.+. .|+.||||+....
T Consensus 26 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~ 57 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTV-------LGINVAVKKLSRP 57 (359)
T ss_pred EEEeecCCCEEEEEEEEcC-------CCceeEEEEeccc
Confidence 4789999999999998764 2689999987543
No 256
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=84.88 E-value=4.8 Score=38.24 Aligned_cols=32 Identities=19% Similarity=0.120 Sum_probs=27.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.+..|.||+|+..++ |++||+|+.++..
T Consensus 5 ~~ig~g~~~~vy~~~~~~~-------~~~~~iK~~~~~~ 36 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKT-------GEIVALKKIRLDN 36 (282)
T ss_pred hcccccCcceEEEeeecCC-------CcEEEEEEecccc
Confidence 4578999999999999752 6999999998764
No 257
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=84.73 E-value=8.2 Score=36.71 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=26.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+-|+||+|+..+. .+ ....|+||+-+...
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~-~~---~~~~v~ik~~~~~~ 46 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSP-EN---EKIAVAVKTCKNCT 46 (270)
T ss_pred eeeeCCccceeEEEEEEecC-CC---CCcceEEEecCCcC
Confidence 47889999999999998652 01 13579999776654
No 258
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=84.69 E-value=4.6 Score=38.36 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=26.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+.|.||+|..++. |+.||+|+...+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~-------~~~~~~K~~~~~ 42 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKED 42 (263)
T ss_pred eeecCCcccceEEEEEEecC-------CceEEEEEecCC
Confidence 46799999999999998752 689999986543
No 259
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=84.58 E-value=9.6 Score=36.25 Aligned_cols=32 Identities=13% Similarity=-0.078 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+-|+||+|..... |..|++|+....
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~-------~~~~~~k~~~~~ 38 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDT-------GRELAAKQVQFD 38 (266)
T ss_pred cceecCCCCEEEEEEEEcCC-------CcEEEEEEeecC
Confidence 57899999999999988652 689999975543
No 260
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=84.54 E-value=7.9 Score=36.87 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+-++.+..|+||+|+.+.. | ..+..||||..+++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~--~--~~~~~~~ik~~~~~ 43 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLP--G--KREIPVAIKTLKAG 43 (267)
T ss_pred eeeecccCCCceEEEEEecC--C--CCceEEEEEECCCC
Confidence 46789999999999998642 2 12458999987654
No 261
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=84.44 E-value=1.1 Score=49.46 Aligned_cols=116 Identities=21% Similarity=0.207 Sum_probs=70.3
Q ss_pred CChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCH
Q 012848 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357 (455)
Q Consensus 278 ~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l 357 (455)
.++..++.-|.++-+|||-.|-||-|+-+.+ |++|||||.-.- .+|.-
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRkt-------GrdVAvKvIdKl--------------------rFp~k----- 605 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKT-------GRDVAVKVIDKL--------------------RFPTK----- 605 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceeccc-------Cceeeeeeeecc--------------------cCCCc-----
Confidence 3567778888899999999999999998763 799999985311 23321
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCe-EeCcccCCCCCCCe-EEeecccCccccchhHHhhhchhhHHH
Q 012848 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAV-LVETYEQGECVSRYVDELQGHERLKSA 435 (455)
Q Consensus 358 ~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V-~vP~~~~~lst~rV-LVmE~i~G~~i~~~~~~l~~~~~~~~~ 435 (455)
+|=-+|+|-+-++.. . .+.| .+--.+ -+.++| .|||-++|--+.=++.. ..+ +
T Consensus 606 ------------qesqlR~EVaILq~l----~-HPGiV~le~M~--ET~ervFVVMEKl~GDMLEMILSs--Ekg----R 660 (888)
T KOG4236|consen 606 ------------QESQLRNEVAILQNL----H-HPGIVNLECMF--ETPERVFVVMEKLHGDMLEMILSS--EKG----R 660 (888)
T ss_pred ------------hHHHHHHHHHHHHhc----C-CCCeeEEEEee--cCCceEEEEehhhcchHHHHHHHh--hcc----c
Confidence 122346666655532 2 2333 222222 356666 57999999766544322 223 3
Q ss_pred HHHHHHHHHHHhhhc
Q 012848 436 LAHIGTHALLKMLLV 450 (455)
Q Consensus 436 LA~~g~~aflkmlf~ 450 (455)
|-.+.++.++.||++
T Consensus 661 L~er~TkFlvtQIL~ 675 (888)
T KOG4236|consen 661 LPERITKFLVTQILV 675 (888)
T ss_pred chHHHHHHHHHHHHH
Confidence 444555555555543
No 262
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=84.18 E-value=6.3 Score=39.46 Aligned_cols=31 Identities=26% Similarity=0.204 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.++|+.+..|.||+|+-+. .|+.||||+...
T Consensus 15 ~~~ig~g~~g~v~~~~~~~-------~~~~vaiK~~~~ 45 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQL-------TGQNVAIKKIMK 45 (328)
T ss_pred EEeecccCCeEEEEEEECC-------CCCEEEEEEecc
Confidence 4799999999999999764 268999997654
No 263
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=84.08 E-value=5 Score=47.16 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=26.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.||.|+-|.||+|+.+.. |+.||||+.+.+.
T Consensus 7 i~~LGkGgfG~VYlA~d~~t-------g~~VAIK~I~~~l 39 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVC-------SRRVALKKIREDL 39 (932)
T ss_pred EEEEecCCCEEEEEEEECCC-------CcEEEEEEECccc
Confidence 36789999999999987642 6899999887543
No 264
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=84.01 E-value=13 Score=35.76 Aligned_cols=40 Identities=25% Similarity=0.320 Sum_probs=27.3
Q ss_pred cccccccCcceEEEeEecccCC---------CCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYP---------GQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~---------G~~~~G~~VAVKVqrPgV 328 (455)
.+-+|.|+.|.||+|+..+.-. .....+..||+|+.+++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~ 58 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA 58 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc
Confidence 4678999999999999865200 011234678999877664
No 265
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=83.45 E-value=9.7 Score=37.11 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=23.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.|+.|+.|+||+|+++++ | ....|++|+.+
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~--~---~~~~~~ik~~~ 38 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKD--G---LKMNAAIKMLK 38 (297)
T ss_pred eeeecCCCcceEEEEEecCC--C---CcceeEEEEcc
Confidence 56799999999999999762 2 12357888654
No 266
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=83.35 E-value=2.3 Score=40.43 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeCcccCCCC------CCCeEEeecccCc-cccchhHHhh-hchhhHHHHHHHHHHHHH
Q 012848 374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLV------HPAVLVETYEQGE-CVSRYVDELQ-GHERLKSALAHIGTHALL 445 (455)
Q Consensus 374 fr~EA~nl~rf~~~f~~~~~V~vP~~~~~ls------t~rVLVmE~i~G~-~i~~~~~~l~-~~~~~~~~LA~~g~~afl 445 (455)
..+|.+|+.++.+ ..|.+|+|+.-.. .+.+|+||+++|. ++.++..... .....++.+...+.+ ++
T Consensus 58 a~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~-~i 131 (206)
T PF06293_consen 58 AKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALAR-LI 131 (206)
T ss_pred HHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHH-HH
Confidence 4778889988875 3788899874211 3448999999995 6777654311 122234555555554 45
Q ss_pred HhhhccCCCC
Q 012848 446 KMLLVPYLNN 455 (455)
Q Consensus 446 kmlf~dgFv~ 455 (455)
..|-..|++|
T Consensus 132 ~~lH~~gi~H 141 (206)
T PF06293_consen 132 AKLHDAGIYH 141 (206)
T ss_pred HHHHHCcCCC
Confidence 5667777776
No 267
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=83.13 E-value=5.2 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=28.4
Q ss_pred ccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 286 ~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+|| -++||=|.-|+|+.|+-+++ |.-.|+|+.+
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~T-------g~iyAmK~Lk 175 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDT-------GEIYAMKILK 175 (550)
T ss_pred cchhheeeccccceeEEEEEEccC-------CcEEeeeccc
Confidence 465 48999999999999999984 6999999765
No 268
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=83.04 E-value=9.8 Score=37.44 Aligned_cols=42 Identities=24% Similarity=0.178 Sum_probs=31.3
Q ss_pred hCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 276 lG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+....++.|.. ...++.|+.|+||+|+.+.+ |+.||||....
T Consensus 9 ~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~-------~~~~~ik~~~~ 50 (308)
T cd06634 9 FKDDPEKLFSD--LREIGHGSFGAVYFARDVRN-------SEVVAIKKMSY 50 (308)
T ss_pred hcCCcHHHHHH--HHheeeCCCEEEEEEEEcCC-------CcEEEEEEEec
Confidence 44556666653 46699999999999998752 68999996643
No 269
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=82.92 E-value=15 Score=34.69 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=24.3
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-++.|+-|-||+|+.+.. ..+..||||+....
T Consensus 2 ~lg~G~~g~v~~~~~~~~-----~~~~~~aiK~~~~~ 33 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMK-----KSEKTVAVKILKND 33 (257)
T ss_pred cCCCcCCcceEEeEEecC-----CCceEEEEEEccCC
Confidence 378899999999987542 12589999997644
No 270
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=82.67 E-value=8.2 Score=36.24 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=24.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.+.++.|+.|.||+++.+.+ |+.||||..
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~-------~~~~~ik~~ 33 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKED-------GKQYVIKEI 33 (256)
T ss_pred EEEeccCCceEEEEEEEcCC-------CCEEEEEEE
Confidence 46789999999999998752 689999964
No 271
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=82.29 E-value=5.3 Score=40.46 Aligned_cols=31 Identities=23% Similarity=0.158 Sum_probs=24.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.. + +..||||+..
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~--~----~~~vavK~~~ 65 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNE--D----FPPVAIKRFE 65 (340)
T ss_pred EEEEeecCCeEEEEEEEECC--C----CeEEEEEEEE
Confidence 47899999999999997642 1 4789999763
No 272
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=82.09 E-value=5.1 Score=46.35 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=25.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
++.++.|.-|.||+|+.+.+ |+.||||...
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~ 724 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKN-------GMQFVVKEIN 724 (968)
T ss_pred ccEEccCCCeeEEEEEECCC-------CcEEEEEEcc
Confidence 56899999999999998652 6899999754
No 273
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=82.08 E-value=15 Score=36.59 Aligned_cols=39 Identities=28% Similarity=0.275 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.++|+.|+-|+||+|.-.........++..||||+.+.+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~ 55 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD 55 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc
Confidence 478999999999999864310001112458999987543
No 274
>PTZ00284 protein kinase; Provisional
Probab=82.08 E-value=5.4 Score=42.24 Aligned_cols=30 Identities=27% Similarity=0.212 Sum_probs=25.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.||.|+-|.||+|+.+.. |+.||||+.+
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~-------~~~vAvK~i~ 163 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKR-------KEYCAVKIVR 163 (467)
T ss_pred EEEEEeccCEEEEEEEEcCC-------CeEEEEEEEe
Confidence 36799999999999998652 6899999874
No 275
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=82.08 E-value=2.7 Score=44.18 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=27.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.-+|+|+=|=|++++.+.+ |+-.|+|+.+=++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t-------~~i~AlK~I~~~~ 116 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPT-------GKIYALKVILLNI 116 (364)
T ss_pred hhcccCCCcEEEEEEEcCC-------CeEEEEEeecccC
Confidence 6789999999999999863 6999999985444
No 276
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=81.88 E-value=16 Score=35.02 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-+.|+.|.-|.||+|+.+.+ |. ....+||||+....
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~--~~-~~~~~va~K~~~~~ 47 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPD--GE-NVKIPVAIKVLREN 47 (279)
T ss_pred eeecCCCCCceEEEEEEecC--CC-ccceEEEEEEecCC
Confidence 37899999999999997642 31 11246899987644
No 277
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=81.73 E-value=15 Score=35.04 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=23.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.+|.|.-|.||+|+++++ | ....|++|+.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~--~---~~~~~~~k~~~~ 32 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKD--G---LRMDAAIKRMKE 32 (270)
T ss_pred CcCCCCCCceEEEEEEcCC--C---CeeEEEEEEccc
Confidence 3688999999999999752 2 124578887654
No 278
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=81.72 E-value=5 Score=37.82 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|+-|-||+|+.++ ++.|++|+....
T Consensus 11 ~~~ig~g~~~~vy~~~~~~--------~~~~~~k~~~~~ 41 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKN--------RVRVAIKILKSD 41 (261)
T ss_pred hhhhccCCCccEEEeEecC--------CCcEEEEecccc
Confidence 3567899999999999975 589999986543
No 279
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=81.51 E-value=15 Score=36.02 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=16.8
Q ss_pred cccccccCcceEEEeEecc
Q 012848 289 EAPVASGSIAQVHRASLRF 307 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~ 307 (455)
.+.+|.|+.|+||+|+.++
T Consensus 12 ~~~lg~G~~g~V~~a~~~~ 30 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKK 30 (303)
T ss_pred eeeecCCCCceEEEEEEcc
Confidence 4779999999999999875
No 280
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=81.50 E-value=7.2 Score=38.75 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=22.2
Q ss_pred cccc--CcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 292 VASG--SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 292 iASA--SIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
||.| +.+.||+++.+.+ |+.||||+....
T Consensus 6 ig~G~~~~~~v~~~~~~~~-------~~~vaiK~~~~~ 36 (327)
T cd08227 6 IGRGFEDLMTVNLARYKPT-------GEYVTVRRINLE 36 (327)
T ss_pred ccccccceEEEEEEeeccc-------CcEEEEEEechh
Confidence 4555 8899999999752 699999976543
No 281
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=81.42 E-value=11 Score=36.58 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=24.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
...++.|+-|.||+|+.... +....+..|++|....
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~--~~~~~~~~~~~k~~~~ 45 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNL--SPTKDKMLVAVKALKD 45 (291)
T ss_pred eeeecccCCCeEEEeEeecc--CCCCcceeeEEEecCC
Confidence 36788899999999986431 1112356788887653
No 282
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=81.38 E-value=10 Score=37.99 Aligned_cols=31 Identities=29% Similarity=0.049 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.++|+.|+-|.||+|+.+.+ |+.||||+...
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~-------~~~v~iK~i~~ 40 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDC-------DKRVAVKKIVL 40 (342)
T ss_pred EEEecCCCCEEEEEEEECCC-------CcEEEEEEEec
Confidence 57899999999999998752 68999997643
No 283
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=81.34 E-value=19 Score=34.74 Aligned_cols=37 Identities=24% Similarity=0.238 Sum_probs=27.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+++|.|+-|.||+|+.+.. +....+..||||+.+.+
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~--~~~~~~~~~a~k~~~~~ 53 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGL--DNPNETSTVAVKMLKDD 53 (293)
T ss_pred eeEecccccccEEEEEEecC--CCCCCceeEEEEEccCC
Confidence 36899999999999998742 11123578999987764
No 284
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=81.34 E-value=3.8 Score=38.94 Aligned_cols=18 Identities=11% Similarity=0.318 Sum_probs=15.7
Q ss_pred ccccccCcceEEEeEecc
Q 012848 290 APVASGSIAQVHRASLRF 307 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~ 307 (455)
++||.|+-|+||+|+.+.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~ 18 (258)
T cd05078 1 ESLGQGTFTKIFKGIRRE 18 (258)
T ss_pred CCCCcccchhheeeeecc
Confidence 478999999999999865
No 285
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=81.10 E-value=10 Score=35.29 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=24.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.+++|.-|.||+|.... .|+.||+|+...
T Consensus 6 ~~lg~g~~~~v~~~~~~~-------~~~~~~~k~~~~ 35 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKS-------DGKILVWKEIDY 35 (265)
T ss_pred eeeccCCCeEEEEeeecC-------CCCEEEEEEEec
Confidence 678999999999998765 268999997653
No 286
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=81.03 E-value=7 Score=39.00 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=25.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|.-|.||+|+.+.+ |+.||||+..|
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~-------~~~vaiK~~~~ 40 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPT-------GVKVAIKKISP 40 (336)
T ss_pred EEEEEecCCeEEEEEEEcCC-------CCeEEEEEecc
Confidence 46789999999999987642 68999998765
No 287
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=80.90 E-value=9.5 Score=36.68 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=23.7
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
++.|+.|+||+++.+.. |+.+|+|+-.+
T Consensus 24 lg~g~~g~v~~~~~~~~-------~~~~~~k~~~~ 51 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPT-------QKLFVQKIIKA 51 (267)
T ss_pred ecCCCceEEEEEEEcCC-------CcEEEEEEEeh
Confidence 69999999999998752 68999999654
No 288
>PRK05231 homoserine kinase; Provisional
Probab=80.76 E-value=15 Score=36.71 Aligned_cols=50 Identities=8% Similarity=-0.026 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 261 pp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.+.+.+++++++ +.+|. .++ .+-+|++.|...++|+-+..+ | ..++|+-+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~--------g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQ--------G-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCC--------C-cEEEEEec
Confidence 456777887887 67775 121 234789999999999987642 3 68889754
No 289
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=80.66 E-value=8.5 Score=38.94 Aligned_cols=31 Identities=26% Similarity=0.140 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.||.|+-|+||+|+-+.. |+.||||+...
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~ 59 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAIL-------ERNVAIKKLSR 59 (364)
T ss_pred EEEeecCCCeEEEEEEECCC-------CcEEEEEEeCc
Confidence 47899999999999987642 68999998654
No 290
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=80.56 E-value=3.4 Score=44.38 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+-+|+|--|-|-.|.=+.+ |+.|||||.+-.
T Consensus 177 ~~~LGsGafg~Vkla~e~~t-------gk~vAiKIi~kr 208 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKT-------GKQVAIKIINKR 208 (475)
T ss_pred eeeecCCceeEEEEEEEccc-------CcEEEeeeeehh
Confidence 57789999999999988763 799999997753
No 291
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=80.49 E-value=2.7 Score=45.28 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=58.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+-+|.|--|-|-+|+-+. .|+.||||-.+-+--+ =+.||--++.-..++
T Consensus 59 etLGkGTYGKVk~A~e~~-------sgR~VAiKsIrKdkIk-deqDlvhIRREIeIM----------------------- 107 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHK-------SGREVAIKSIRKDKIK-DEQDLVHIRREIEIM----------------------- 107 (668)
T ss_pred HHhcCCcccceeehhhcc-------CCcEeehhhhhhhhcc-cHHHHHHHHHHHHHH-----------------------
Confidence 467899999999998754 2799999966544211 022332222222221
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCC-eEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~-V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkml 448 (455)
.. + +.+. +.|=+| .+-..+-|+||||-.|--+.||+.. . ..|..+-.+-|++||
T Consensus 108 ------------Ss----L-NHPhII~IyEV-FENkdKIvivMEYaS~GeLYDYiSe---r----~~LsErEaRhfFRQI 162 (668)
T KOG0611|consen 108 ------------SS----L-NHPHIIQIYEV-FENKDKIVIVMEYASGGELYDYISE---R----GSLSEREARHFFRQI 162 (668)
T ss_pred ------------hh----c-CCCceeehhhh-hcCCceEEEEEEecCCccHHHHHHH---h----ccccHHHHHHHHHHH
Confidence 11 1 1222 233333 2346677999999999999988754 2 234444444555554
No 292
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=79.73 E-value=10 Score=36.39 Aligned_cols=31 Identities=19% Similarity=0.271 Sum_probs=25.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.++.|+-|+||+|..+.. |..|++|+...+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~-------~~~~~~k~~~~~ 41 (282)
T cd06643 11 GELGDGAFGKVYKAQNKET-------GVLAAAKVIDTK 41 (282)
T ss_pred hhcccCCCeEEEEEEECCC-------CeEEEEEEeCCC
Confidence 5699999999999998652 688999987543
No 293
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=79.55 E-value=1.1 Score=50.01 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=27.7
Q ss_pred hHhhccccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 280 LSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 280 ~~eiF~~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
|+..++++. -++||+||.|-||||... | +||||+..
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh----G------dVAVK~Ln 423 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWH----G------DVAVKLLN 423 (678)
T ss_pred cccCHHHhhccceeccccccceeecccc----c------ceEEEEEe
Confidence 444444443 589999999999999996 3 79999874
No 294
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=79.39 E-value=1.6 Score=48.56 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=35.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc--cchHhHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG--ESIRRDFVIINLAA 343 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~--~~i~~DL~il~~la 343 (455)
.+.||.||-|||-||.-+.+ |+.|||||.+-.-+ .+-...+.||..+-
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T-------~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln 240 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKT-------GEIVAIKIIKNKKRFLRQAQIEIRILELLN 240 (586)
T ss_pred EEEecccccceeEEEEecCC-------CcEEEEEeeccChHHHHHHHHHHHHHHHHh
Confidence 47899999999999988652 69999999876543 34444555555544
No 295
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=78.91 E-value=8.6 Score=35.82 Aligned_cols=31 Identities=16% Similarity=0.030 Sum_probs=24.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.++.|.||+++.+. .|+.++||+...
T Consensus 5 ~~~i~~g~~~~v~~~~~~~-------~~~~~~ik~~~~ 35 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLS-------DNQFYALKEVDL 35 (256)
T ss_pred eeeecCCCceeEEEEEECC-------CCCEEEEEEEeh
Confidence 3568889999999998764 268999998654
No 296
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=78.84 E-value=25 Score=33.02 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=23.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.|+.|+.|+||+|+..+. + ..+..||||...
T Consensus 2 ~lg~g~~g~v~~~~~~~~--~--~~~~~~aiK~~~ 32 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDS--D--GQKIHCAVKSLN 32 (262)
T ss_pred cccccCCceEEEEEEecC--C--CceEEEEEEecC
Confidence 578999999999998642 1 124789999754
No 297
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=78.69 E-value=3.2 Score=39.79 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=33.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc-----ccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-----GESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV-----~~~i~~DL~il~~l 342 (455)
-++++.|+.|+||+|+.+.+ |+.||||+.+... .+.+...+.+++.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l 56 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLT-------GEVVALKKIRLDTETEGVPSTAIREISLLKEL 56 (284)
T ss_pred eeeecCCCceEEEEEEECCC-------CCEEEEEEccccccccccchHHHHHHHHHHhc
Confidence 46789999999999998652 6899999886443 33455566555544
No 298
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=78.61 E-value=3.9 Score=40.12 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=36.1
Q ss_pred cccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC-CcccchHhHHHHHHHH
Q 012848 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP-GVGESIRRDFVIINLA 342 (455)
Q Consensus 287 fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP-gV~~~i~~DL~il~~l 342 (455)
++...+|.|+-|.||+|+.++.. .++.||||+... +....+...+.+++.+
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~E~~~l~~l 55 (317)
T cd07868 4 YEGCKVGRGTYGHVYKAKRKDGK-----DDRDYALKQIEGTGISMSACREIALLREL 55 (317)
T ss_pred ccccccccCCCeEEEEEEEccCC-----CCceEEEEEECCCCCcHHHHHHHHHHHhc
Confidence 56678999999999999986521 258999998764 3344455566666544
No 299
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=78.60 E-value=17 Score=36.06 Aligned_cols=27 Identities=15% Similarity=0.060 Sum_probs=21.1
Q ss_pred ccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 294 SGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 294 SASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-++.++||+|+.+.. |+.||||+....
T Consensus 10 ~~~~~~v~~a~~~~~-------~~~vaiK~~~~~ 36 (328)
T cd08226 10 FCNLTSVYLARHTPT-------GTLVTVRITDLE 36 (328)
T ss_pred ccCceeEEEEEEcCC-------CcEEEEEEeccc
Confidence 358899999988642 699999987643
No 300
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=78.54 E-value=9.1 Score=41.34 Aligned_cols=31 Identities=26% Similarity=0.075 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.||.|+-|.||+|+.+.+ |+.||||+...
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~-------g~~vAvK~i~~ 67 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSD-------GEPFAVKVVDM 67 (496)
T ss_pred EEEEecCCCEEEEEEEEcCC-------CCEEEEEEEec
Confidence 46799999999999998652 69999998754
No 301
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=78.45 E-value=6.8 Score=42.66 Aligned_cols=110 Identities=21% Similarity=0.181 Sum_probs=67.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+=||+|-.|-||.|+++. ..+||||.+.||- +
T Consensus 212 ~~LG~G~FG~V~~g~~~~--------~~~vavk~ik~~~----------------------------------------m 243 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNG--------STKVAVKTIKEGS----------------------------------------M 243 (468)
T ss_pred HHhcCCccceEEEEEEcC--------CCcccceEEeccc----------------------------------------c
Confidence 346789999999999964 3599999999881 0
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCC---CeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP---AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~---rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflk 446 (455)
.+-||..||+-|.+++. .+=|.. +..|+. =-|||||+.--++.+|+..-++.......+.....+..-=
T Consensus 244 ~~~~f~~Ea~iMk~L~H----~~lV~l----~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeG 315 (468)
T KOG0197|consen 244 SPEAFLREAQIMKKLRH----EKLVKL----YGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEG 315 (468)
T ss_pred ChhHHHHHHHHHHhCcc----cCeEEE----EEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHH
Confidence 11244578877776542 222222 223333 2699999999999998866333333345555555554333
Q ss_pred h--hhccCCCC
Q 012848 447 M--LLVPYLNN 455 (455)
Q Consensus 447 m--lf~dgFv~ 455 (455)
| |=..||||
T Consensus 316 M~YLes~~~IH 326 (468)
T KOG0197|consen 316 MAYLESKNYIH 326 (468)
T ss_pred HHHHHhCCccc
Confidence 3 33445555
No 302
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=78.04 E-value=19 Score=33.69 Aligned_cols=28 Identities=11% Similarity=-0.009 Sum_probs=22.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
+.++.|+-|+|+.++...+ |+.|++|..
T Consensus 6 ~~ig~g~~g~v~~~~~~~~-------~~~~~~k~~ 33 (256)
T cd08221 6 RVLGKGAFGEATLYRRTED-------DSLVVWKEV 33 (256)
T ss_pred eEecccCCceEEEEEEcCC-------CcEEEEEEE
Confidence 5789999999999987652 688999964
No 303
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=77.65 E-value=3.4 Score=39.53 Aligned_cols=44 Identities=20% Similarity=0.168 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCeEeCcccCCCC--CCCeEEeecccCccccch
Q 012848 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRY 422 (455)
Q Consensus 373 Dfr~EA~nl~rf~~~f~~~~~V~vP~~~~~ls--t~rVLVmE~i~G~~i~~~ 422 (455)
++..|++.+..+.+. +.+|+++.-.. ...+|+|||++|.++.+.
T Consensus 37 ~~~~E~~~l~~l~~~------~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 37 ELEREAERLRWLAGK------LPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred chHHHHHHHHHHHhc------CCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 346788888776642 66999985322 246999999999988753
No 304
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=77.45 E-value=17 Score=34.42 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=24.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+-++.|+-|.||+|+..+. | ....||||.....
T Consensus 5 ~~ig~G~~g~V~~~~~~~~--~---~~~~~a~k~~~~~ 37 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQD--D---SILKVAVKTMKIA 37 (272)
T ss_pred cccCcccCceEEEeEEccC--C---CeeeEEEEecccC
Confidence 4588999999999998652 2 1247999977554
No 305
>PLN02876 acyl-CoA dehydrogenase
Probab=76.65 E-value=21 Score=41.35 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 263 HSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 263 ~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
.+.+.+.+-|.+.++. +..-.+.++-++++.|....+|+-+..+ | .....+++|...|+..
T Consensus 18 ~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~---~--~~~~~~VLR~~p~~~~------------- 78 (822)
T PLN02876 18 FDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGN---G--GSVKRYVLRKKPPGKL------------- 78 (822)
T ss_pred CCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECC---C--CcceeEEEEeCCCCcc-------------
Confidence 5566677777766532 1111112456888999999999877643 1 0114678887666521
Q ss_pred HHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCC-----CCCeEEeecccCc
Q 012848 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV-----HPAVLVETYEQGE 417 (455)
Q Consensus 343 a~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~ls-----t~rVLVmE~i~G~ 417 (455)
.+. .-++.+|++.++.+.. ...|.||+++.-.. ..--+||||++|.
T Consensus 79 ------~~~-------------------~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~ 129 (822)
T PLN02876 79 ------LQS-------------------AHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGR 129 (822)
T ss_pred ------Ccc-------------------HHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCc
Confidence 000 1134677777776643 35688999885222 2345899999998
Q ss_pred cccc
Q 012848 418 CVSR 421 (455)
Q Consensus 418 ~i~~ 421 (455)
.+.+
T Consensus 130 ~~~~ 133 (822)
T PLN02876 130 IFVD 133 (822)
T ss_pred ccCC
Confidence 7654
No 306
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=76.40 E-value=2.7 Score=44.38 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccch
Q 012848 376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY 422 (455)
Q Consensus 376 ~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~ 422 (455)
.|-+-++.+.+ ..+.||+|+ =+++.+.|||+++|.|+...
T Consensus 159 kEfafmkaL~e-----~gfpVPkpi--D~~RH~Vvmelv~g~Pl~~v 198 (465)
T KOG2268|consen 159 KEFAFMKALYE-----RGFPVPKPI--DHNRHCVVMELVDGYPLRQV 198 (465)
T ss_pred HHHHHHHHHHH-----cCCCCCCcc--cccceeeHHHhhcccceeee
Confidence 44444555543 467799999 58999999999999999875
No 307
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=75.99 E-value=21 Score=34.50 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=26.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.|+-|.||+|+.... .+...+..|++|+.+.+.
T Consensus 6 ~~lg~g~~g~vy~~~~~~~--~~~~~~~~~~~k~~~~~~ 42 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRL--KGRAGYTTVAVKMLKENA 42 (290)
T ss_pred ccccCcCCcceEEEEEecC--CCCCcceeEEEEecCCCC
Confidence 5678999999999987531 111235789999887654
No 308
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=75.53 E-value=4.1 Score=39.38 Aligned_cols=33 Identities=21% Similarity=0.132 Sum_probs=28.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.++.|+.|+||+|+.+++ |+.||||+.+...
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~-------~~~v~iK~~~~~~ 44 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDT-------GELVALKKVRLDN 44 (302)
T ss_pred eeeecccCCEEEEEEEECCC-------CcEEEEEEEeecc
Confidence 46889999999999999752 6899999997654
No 309
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=75.43 E-value=6.9 Score=44.83 Aligned_cols=86 Identities=24% Similarity=0.235 Sum_probs=55.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+-+|.||.|=||||.++.. .| +--.||||..+++....+.
T Consensus 116 e~LG~GsFgvV~rg~Wt~p-sg---k~V~VAVKclr~d~l~~~m------------------------------------ 155 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQP-SG---KHVNVAVKCLRDDSLNAIM------------------------------------ 155 (1039)
T ss_pred HHhcCcceeeEeeccccCC-CC---cEEeEEEEeccCCccchhH------------------------------------
Confidence 4578999999999999862 33 3478999999998642211
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~ 423 (455)
=||.+||+.|-++.. ..-|+.=-++ +.-+-.||||..++-++-|-+
T Consensus 156 --ddflrEas~M~~L~H----~hliRLyGvV--l~qp~mMV~ELaplGSLldrL 201 (1039)
T KOG0199|consen 156 --DDFLREASHMLKLQH----PHLIRLYGVV--LDQPAMMVFELAPLGSLLDRL 201 (1039)
T ss_pred --HHHHHHHHHHHhccC----cceeEEeeee--ccchhhHHhhhcccchHHHHH
Confidence 156777777765432 1222322233 345667888888877665543
No 310
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=75.08 E-value=4.5 Score=38.60 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=33.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC-----CcccchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP-----GVGESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP-----gV~~~i~~DL~il~~l 342 (455)
+.+++++.|+||+|+.+.+ |+.||+|+... .+.+.+..++.+++.+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~ 57 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRET-------GQIVAIKKFVESEDDPVIKKIALREIRMLKQL 57 (286)
T ss_pred eeecccCCeEEEEEEECCC-------CcEEEEEEEeecccCccccHHHHHHHHHHHhC
Confidence 5689999999999998752 68999998753 3334455666666544
No 311
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=74.63 E-value=16 Score=39.93 Aligned_cols=92 Identities=21% Similarity=0.290 Sum_probs=56.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+=+|.|.-|-|++|+|+.. +... ..+||||..+=. ... ..+
T Consensus 163 kkLGeGaFGeV~~G~l~~~--~~~~-~~~VAvK~~k~~-------------------~~~-------~~~---------- 203 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLK--NGFK-VVPVAVKTTKGS-------------------SEL-------TKE---------- 203 (474)
T ss_pred ceeecccccEEEEEEEEec--CCce-eeeeEEEeeccc-------------------ccc-------cHH----------
Confidence 7899999999999999862 2101 123899954320 000 011
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHH
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
+..+|-+||+=+..+ . +++|.-=--+.-+..|=.||||+++|-.+.+++..
T Consensus 204 ~~~e~m~EArvMr~l----~-H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k 254 (474)
T KOG0194|consen 204 QIKEFMKEARVMRQL----N-HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKK 254 (474)
T ss_pred HHHHHHHHHHHHHhC----C-CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHh
Confidence 223557888777653 2 33332211123356788899999999999988754
No 312
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=74.24 E-value=4.9 Score=38.49 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=31.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc-----ccchHhHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-----GESIRRDFVIINL 341 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV-----~~~i~~DL~il~~ 341 (455)
+.++.++.|+||+|+.+.+ |+.||||+.+.+. .+.+..++.+++.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~ 54 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLT-------GEIVALKKIRLETEDEGVPSTAIREISLLKE 54 (283)
T ss_pred eEecCCCCeEEEEEEEcCC-------CCEEEEEEeecccccccchhHHHHHHHHHHh
Confidence 4689999999999998752 6899999987543 2234445554443
No 313
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=73.82 E-value=24 Score=34.14 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=24.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.+.++.|+-|.||+++.++. ....++..||||..
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~--~~~~~~~~~~ik~~ 43 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNL--CPEQDKILVAVKTL 43 (288)
T ss_pred ccccCCcCCeeEEeeEeccC--CCCCcceEEEEEec
Confidence 56789999999999987542 11123567888865
No 314
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=73.77 E-value=5.3 Score=38.99 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=35.8
Q ss_pred cccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC-cccchHhHHHHHHHH
Q 012848 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-VGESIRRDFVIINLA 342 (455)
Q Consensus 287 fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg-V~~~i~~DL~il~~l 342 (455)
.+...+|.|+-|.||+|+.++. ..+..||||+.++. ....+..++.+++.+
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l 55 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDG-----KDEKEYALKQIEGTGISMSACREIALLREL 55 (317)
T ss_pred eeceEeccCCCeeEEEEEecCC-----CccceEEEEEecCCCCcHHHHHHHHHHHhC
Confidence 5667899999999999998752 12589999987654 333445555555544
No 315
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=73.72 E-value=10 Score=35.69 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=23.5
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+.|+.|+.|.||+|+.... +..+++|+.+.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~-------~~~~~~~~~~~ 35 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKA-------VAEERLKVLKE 35 (260)
T ss_pred eeecCCCCceEEEEEecCC-------CCcceEEEecc
Confidence 5799999999999987642 46678887655
No 316
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=73.63 E-value=5.7 Score=38.03 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCC-----CCeEEeecccCccccch
Q 012848 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH-----PAVLVETYEQGECVSRY 422 (455)
Q Consensus 373 Dfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst-----~rVLVmE~i~G~~i~~~ 422 (455)
++..|++++..+.+. ..+.+|+++..-.. ...++|||++|.++.+.
T Consensus 34 ~~~~E~~~l~~L~~~----~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~~~ 84 (235)
T cd05155 34 QVRKEQRWLPRLAPH----LPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETATAA 84 (235)
T ss_pred HHHHHHHHHHHHhcc----CCCCCCceeecCCCccCCCcceEEEEeecCCCCCcc
Confidence 457888888877653 35788998743211 23689999999998764
No 317
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=73.62 E-value=5.2 Score=38.25 Aligned_cols=46 Identities=13% Similarity=0.148 Sum_probs=32.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~l 342 (455)
+.|++++.|+||+|+.+++ |+.||||+.+.... +.+...+.+++.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l 56 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKT-------GQIVAMKKIRLESEEEGVPSTAIREISLLKEL 56 (285)
T ss_pred eEecccCceEEEEEEECCC-------CcEEEEEEeccccccCCchHHHHHHHHHHHhc
Confidence 5789999999999998752 68999999875432 2344555555543
No 318
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=73.41 E-value=6 Score=37.95 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=34.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc-----ccchHhHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-----GESIRRDFVIINLAA 343 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV-----~~~i~~DL~il~~la 343 (455)
+-||.|+-|+||+|+.+++ |+.||||+..... ...+..++.+++.+.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~ 57 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHS-------GHFVALKSVRVQTNEDGLPLSTVREVALLKRLE 57 (288)
T ss_pred eEEeecCCeEEEEEEECCC-------CcEEEEEEeccCcCCCCCchHHHHHHHHHHHhh
Confidence 4589999999999998752 6899999887533 234556666666554
No 319
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=72.80 E-value=26 Score=34.47 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCc-cccchh
Q 012848 375 AREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE-CVSRYV 423 (455)
Q Consensus 375 r~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~-~i~~~~ 423 (455)
.+||+-+.+.+.. .+.+|++|.-=...+-|.|||++|. .+.+++
T Consensus 58 ~~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i 102 (229)
T KOG3087|consen 58 KQEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFI 102 (229)
T ss_pred HHHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHH
Confidence 5688888888764 6889999854467788999999994 455554
No 320
>PRK12396 5-methylribose kinase; Reviewed
Probab=72.76 E-value=11 Score=40.44 Aligned_cols=143 Identities=18% Similarity=0.047 Sum_probs=81.6
Q ss_pred cCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHH
Q 012848 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337 (455)
Q Consensus 258 D~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~ 337 (455)
+...++.-+.+...+.+.+|. +..- +...-+||+-|-+.=|||..+.+ | ++.|+||=--|-++ +.
T Consensus 5 ~~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~---~----~~svIVKQAlp~vR--v~---- 69 (409)
T PRK12396 5 TKYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQ---K----NISVIVKQAGDTAR--IS---- 69 (409)
T ss_pred ccceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCC---C----CceEEEEeccHhhc--cC----
Confidence 344556666677777666562 1110 23446899999999999999853 2 46899995555443 10
Q ss_pred HHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCc
Q 012848 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417 (455)
Q Consensus 338 il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~ 417 (455)
.-.| ++++-. +.|+.-+..+.+...+ .+|++|.--..-.++|||+++..
T Consensus 70 ---------~swp----L~~~R~--------------~~E~~aL~~~~~~~P~----~VP~vy~~D~e~~~~vMEdL~~~ 118 (409)
T PRK12396 70 ---------DEFK----LSTNRI--------------RIESDVLQLEEELAPG----LVPKVYLFDSVMNCCVMEDLSDH 118 (409)
T ss_pred ---------CCCC----CChHHH--------------HHHHHHHHHHHhhCCC----cCCeEEEECcHHhhHHHHhCccc
Confidence 0011 122211 5577777766654322 39999965556679999999765
Q ss_pred cccchhHHhhhchhhHHHHHHHHHHHHHHhhh
Q 012848 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLL 449 (455)
Q Consensus 418 ~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf 449 (455)
.+-+ +.+-.... ...+|..+.+...+-+|
T Consensus 119 ~ilR--~~Li~G~~-~p~~A~~ig~fla~tlf 147 (409)
T PRK12396 119 TILR--TALINHEI-FPRLADDLTTFLVNTLL 147 (409)
T ss_pred HHHH--HHHHcCCc-ChhHHHHHHHHHHHHHh
Confidence 5432 22222221 23455555554444444
No 321
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=72.25 E-value=43 Score=32.90 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=26.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.++.|.-|.||+|+...........+..||+|+.+..
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~ 55 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN 55 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC
Confidence 588999999999999864210000113578999987654
No 322
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=72.02 E-value=6.9 Score=41.07 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=34.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCccc----chHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE----SIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~----~i~~DL~il~~l 342 (455)
.+.||.|+.|+||+|+.+.. +....+++||||+.+..... .+...+.+|..+
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~--~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l 97 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGL--SHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHL 97 (401)
T ss_pred hhhccCCCceeEEEEEEcCC--CCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhc
Confidence 47899999999999998631 12234679999999865433 233444444443
No 323
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=72.00 E-value=6.8 Score=38.74 Aligned_cols=43 Identities=33% Similarity=0.338 Sum_probs=34.0
Q ss_pred hCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 276 lG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
++.+++++|..++. ++.|+.|.||+|+.... |+.|+||+....
T Consensus 15 ~~~~~~~~~~~~~~--lg~g~~g~v~~~~~~~~-------~~~v~ik~~~~~ 57 (313)
T cd06633 15 YKDDPEEIFVGLHE--IGHGSFGAVYFATNSHT-------NEVVAVKKMSYS 57 (313)
T ss_pred ccCCHHHHhhccee--eccCCCeEEEEEEECCC-------CcEEEEEEEecc
Confidence 45788888776554 99999999999998642 689999987643
No 324
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=71.91 E-value=20 Score=39.40 Aligned_cols=38 Identities=11% Similarity=-0.025 Sum_probs=26.7
Q ss_pred cccccccCcceEEEeEecccCCC---------CCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPG---------QKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G---------~~~~G~~VAVKVqrP 326 (455)
.+-||.|+.|.||+|.+....+. ...+++.||||..+.
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~ 196 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNM 196 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecc
Confidence 57899999999999986431100 113468899998754
No 325
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=71.76 E-value=6.1 Score=37.86 Aligned_cols=48 Identities=19% Similarity=0.295 Sum_probs=35.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC--cccchHhHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG--VGESIRRDFVIINLAA 343 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg--V~~~i~~DL~il~~la 343 (455)
.+.|+.+..|.||+|+.+.. |+.||||+..+. ....+..++.+++.+.
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~ 72 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKN-------GSKAAVKILDPIHDIDEEIEAEYNILKALS 72 (286)
T ss_pred eeeeccCCCcEEEEEEECCC-------CceeEEEeeccccchHHHHHHHHHHHHHHh
Confidence 36899999999999998752 689999997763 3345566666665553
No 326
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=70.08 E-value=24 Score=34.40 Aligned_cols=20 Identities=5% Similarity=-0.032 Sum_probs=15.9
Q ss_pred CCeEEeecccCccccchhHH
Q 012848 406 PAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 406 ~rVLVmE~i~G~~i~~~~~~ 425 (455)
...++|||++|..+.+++..
T Consensus 73 ~~~~~~e~~~~~~l~~~l~~ 92 (314)
T cd08216 73 ELYVVSPLMAYGSCEDLLKT 92 (314)
T ss_pred eEEEEEeccCCCCHHHHHHH
Confidence 45799999999988877643
No 327
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=69.92 E-value=5.9 Score=41.36 Aligned_cols=49 Identities=24% Similarity=0.302 Sum_probs=38.6
Q ss_pred cccc-ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc---cchHhHHHHHHHH
Q 012848 286 GFEE-APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG---ESIRRDFVIINLA 342 (455)
Q Consensus 286 ~fd~-~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~---~~i~~DL~il~~l 342 (455)
.|++ .-|+-|.-|-||||.+.+ |+.||||...++-. ..+..++.++..+
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~--------~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l 128 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSD--------GTVVAVKRLSSNSGQGEREFLNEVEILSRL 128 (361)
T ss_pred CCchhcceecCCCeEEEEEEECC--------CCEEEEEEecCCCCcchhHHHHHHHHHhcC
Confidence 5664 889999999999999976 58999998888775 3466666666443
No 328
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=69.23 E-value=29 Score=32.59 Aligned_cols=26 Identities=15% Similarity=-0.019 Sum_probs=20.9
Q ss_pred cCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 295 ASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
|++|-||+++-+.+ |+.||+|+.+..
T Consensus 4 g~~~~v~~~~~~~~-------~~~~~~K~i~~~ 29 (237)
T cd05576 4 GVIDKVLLVMDTRT-------QQTFILKGLRKS 29 (237)
T ss_pred cccceEEEEEEccC-------CcEEEEEeecch
Confidence 78889999988652 689999987654
No 329
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=68.06 E-value=7.3 Score=38.09 Aligned_cols=32 Identities=25% Similarity=0.234 Sum_probs=26.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+-|+||+|+.+.+ |+.||||+.+..
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~ 41 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVN-------GKLVALKVIRLQ 41 (303)
T ss_pred eeeEEecCCEEEEEEEECCC-------CCEEEEEEeccc
Confidence 47899999999999998752 689999998643
No 330
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=67.10 E-value=40 Score=33.07 Aligned_cols=30 Identities=3% Similarity=-0.137 Sum_probs=22.5
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
+-+|+..|....+|+-... +.+.++|+-++
T Consensus 18 ~i~~i~~G~~n~~y~v~~~---------~~~~vLr~~~~ 47 (296)
T cd05153 18 SFEGISAGIENTNYFVTTD---------SGRYVLTLFEK 47 (296)
T ss_pred heecccCccccceEEEEeC---------CCcEEEEEcCC
Confidence 3578989999999987653 24788897654
No 331
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=65.71 E-value=11 Score=36.20 Aligned_cols=48 Identities=23% Similarity=0.221 Sum_probs=32.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~l 342 (455)
.+.|+.|+.|.||+|+... .| |+.||||+.+.... ..+..++.+++.+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~--~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l 58 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLK--NG----GRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 58 (290)
T ss_pred eeEeccCCCeEEEEEEEcC--CC----CeEEEEEEEecccCCCCchHHHHHHHHHHHhh
Confidence 3568999999999998743 12 68999998875432 2334445555443
No 332
>PLN02236 choline kinase
Probab=65.18 E-value=56 Score=33.72 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhCCChHhhc--cccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHH
Q 012848 266 AYTKKTIERAFGRRLSEIF--DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343 (455)
Q Consensus 266 ~~v~~vle~elG~~~~eiF--~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la 343 (455)
..+.+++.+ ++..|.++. +.++-+|+..|---++|+.+..+ |....++.|++|+-.++.+..
T Consensus 17 ~~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~---~~~~~~~~~v~Ri~g~~t~~~------------ 80 (344)
T PLN02236 17 DELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPT---KEGNLGRKVLVRIYGEGVELF------------ 80 (344)
T ss_pred HHHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCC---CCCCCCCeEEEEEccCCCCee------------
Confidence 345566654 666676542 35677899899999999987743 111235789999877764322
Q ss_pred HHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCcccc
Q 012848 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 344 ~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~ 420 (455)
+|-.+|.++++...+. .+ -|+++. +.++-.++||++|.+++
T Consensus 81 ----------------------------idR~~E~~~~~~l~~~-----gl-~P~~~~--~~~~g~v~efi~g~~l~ 121 (344)
T PLN02236 81 ----------------------------FDRDDEIRTFECMSRH-----GQ-GPRLLG--RFPNGRVEEFIHARTLS 121 (344)
T ss_pred ----------------------------echHHHHHHHHHHHHc-----CC-CCceEE--EECCceEEEeeCCCCCC
Confidence 3445566666655432 23 566663 34445789999998876
No 333
>PRK06148 hypothetical protein; Provisional
Probab=64.79 E-value=36 Score=40.55 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=44.4
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 256 LHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 256 LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+....|..+.+++++.+++.||-.- +-+|+++ .--++|+-+..+ |+..++||-+|+
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~--------g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDD--------GADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCC--------CCeEEEEEcCCc
Confidence 4556889999999999999999642 2367865 568899987753 578999999997
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=64.66 E-value=9.7 Score=36.96 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=33.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc------ccchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV------GESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV------~~~i~~DL~il~~l 342 (455)
+.|++|+.|.||+|+.+.+ ..|+.||||+.+++. .+.+..++.+++.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l 59 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNG-----KDGKEYAIKKFKGDKEQYTGISQSACREIALLREL 59 (316)
T ss_pred EEeccCCcEEEEEEEecCC-----CCCCeEEEEEeccccccccCccHHHHHHHHHHHhc
Confidence 4589999999999998752 126999999999854 33444455554443
No 335
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=64.60 E-value=9.8 Score=37.21 Aligned_cols=47 Identities=19% Similarity=0.079 Sum_probs=33.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~l 342 (455)
.+.|+.|+-|.||+|+.+.+ |+.||+|+.+.... ..+..++.+++.+
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l 63 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTS-------GEIVALKKVRMDNERDGIPISSLREITLLLNL 63 (309)
T ss_pred eeeeeecCCEEEEEEEECCC-------CcEEEEEEEEeccCCCCCcchhhHHHHHHHhC
Confidence 35689999999999998752 68999999875432 2334566666544
No 336
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=64.31 E-value=40 Score=40.32 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=26.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
...||.|..|.||+|+.+.. ++.||+|+...
T Consensus 18 l~kLG~GgFGtVYLAkdk~t-------g~~vAlKvIk~ 48 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRT-------QEFFCWKAISY 48 (1021)
T ss_pred EEEEecCCCeEEEEEEECCC-------CeEEEEEEEec
Confidence 46799999999999998752 68999998764
No 337
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=63.88 E-value=11 Score=35.67 Aligned_cols=50 Identities=20% Similarity=0.144 Sum_probs=34.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccc-----hHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES-----IRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~-----i~~DL~il~~l 342 (455)
.+.|+.|+-|.||+|.++.. + ..|+.||||+...++... +..++.+++.+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~-~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l 58 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSE-D---GSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF 58 (273)
T ss_pred hhcccCCCCCCEEeeEeecc-C---CCceEEEEEEeccccCChHHHHHHHHHHHHHhcC
Confidence 35789999999999998642 1 236999999998876432 33445554443
No 338
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=63.19 E-value=11 Score=36.73 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=27.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.+.|+.|+.|+||+|+.+.+ |+.||+|..+....
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~-------~~~vaiK~~~~~~~ 44 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLT-------DNLVALKEIRLEHE 44 (301)
T ss_pred eeEeccCcCEEEEEEEEcCC-------CcEEEEEEEecccc
Confidence 47799999999999998652 68999999875543
No 339
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=62.90 E-value=12 Score=35.80 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=33.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC-----cccchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-----VGESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg-----V~~~i~~DL~il~~l 342 (455)
+.++.|+.|.||+|+.+.. |+.||+|+.+.. ....+..++.+++.+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~-------g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l 56 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRET-------HEIVALKRVRLDDDDEGVPSSALREICLLKEL 56 (284)
T ss_pred EEecccCCeEEEEEEECCC-------CcEEEEEEeecccccccCccchhHHHHHHHhc
Confidence 5689999999999998752 689999987643 233455666666544
No 340
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=62.83 E-value=12 Score=36.02 Aligned_cols=46 Identities=15% Similarity=0.245 Sum_probs=33.7
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~l 342 (455)
+-++.++-|.||+|+.+.+ |+.||||+.+.... ..+..++.+++.+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~-------~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l 57 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNT-------GKLVALKKTRLEMDEEGIPPTALREISLLQML 57 (295)
T ss_pred eEecccCCeEEEEEEECCC-------CcEEEEEeehhhccccCCchHHHHHHHHHHHc
Confidence 4689999999999998752 68999999876543 3345566666554
No 341
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=62.32 E-value=13 Score=35.47 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=34.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLAA 343 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~la 343 (455)
+.++.++.|.||+|+.+.+ |+.||||+.+.... ..+..++.+++.+.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~ 56 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNT-------GRFVALKKVRVPLSEEGIPLSTLREIALLKQLE 56 (287)
T ss_pred EEecccCceEEEEEEECCC-------CCEEEEEEeccccccchhhhhHHHHHHHHHHhh
Confidence 4678999999999999752 68999999985433 23445666666554
No 342
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=61.82 E-value=8.3 Score=45.53 Aligned_cols=46 Identities=20% Similarity=0.135 Sum_probs=35.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
.+-+|-|+=|+||+|+-.+ |+.||+||+.|-.--.+-.=+.++.++
T Consensus 703 ~~e~G~g~y~~vy~a~~~~--------~~~~alK~e~P~~~WEfYI~~q~~~RL 748 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSN--------GKLVALKVEKPPNPWEFYICLQVMERL 748 (974)
T ss_pred EeeeccccceEEEEeecCC--------CcEEEEEeecCCCceeeeehHHHHHhh
Confidence 3568999999999999864 699999999998765554444444443
No 343
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=61.75 E-value=23 Score=38.30 Aligned_cols=84 Identities=18% Similarity=0.099 Sum_probs=52.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~ 369 (455)
+-+|.|.||-||.+.++.. +..-|+||.--..- .. -+. +.+.
T Consensus 83 k~LG~GdiG~VyL~~l~~t-------~~~fAmKVmdK~~l---~~----rkK----------l~Ra-------------- 124 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGT-------NCLFAMKVMDKESL---AS----RKK----------LKRA-------------- 124 (459)
T ss_pred HHcCCCCceeEEEEEecCC-------CceEEEEEecHHHH---hh----hhH----------HHHH--------------
Confidence 5789999999999999852 58999998643210 00 000 0000
Q ss_pred HhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCe--EEeecccCccccchh
Q 012848 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAV--LVETYEQGECVSRYV 423 (455)
Q Consensus 370 ~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rV--LVmE~i~G~~i~~~~ 423 (455)
..|.. .++....=-+|..|..+.|++. |+|||+.|--+..+.
T Consensus 125 -----~tE~e-------IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lr 168 (459)
T KOG0610|consen 125 -----QTERE-------ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLR 168 (459)
T ss_pred -----HHHHH-------HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHH
Confidence 01111 1111122337888888888876 899999999877643
No 344
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=61.47 E-value=16 Score=35.60 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEeCcccCC------CCCCCeEEeecccC-ccccchhHHhhhchhhHHHHHHHHHHHHHH
Q 012848 374 LAREAAHLSRFIYNFRRWKDVSFPKPVYP------LVHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLK 446 (455)
Q Consensus 374 fr~EA~nl~rf~~~f~~~~~V~vP~~~~~------lst~rVLVmE~i~G-~~i~~~~~~l~~~~~~~~~LA~~g~~aflk 446 (455)
+.+|.+.+.++.. ..+.+|+|+.. ...+.+|+|||++| ..+.++++. ..+..+....+. ..+.
T Consensus 87 ~~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~~~~~i~-~~l~ 156 (239)
T PRK01723 87 AFAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE----APLSEEQWQAIG-QLIA 156 (239)
T ss_pred HHHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc----CCCCHHHHHHHH-HHHH
Confidence 4667777776643 35667777632 12234699999998 577665432 111222333333 3467
Q ss_pred hhhccCCCC
Q 012848 447 MLLVPYLNN 455 (455)
Q Consensus 447 mlf~dgFv~ 455 (455)
.+-..|++|
T Consensus 157 ~lH~~GI~H 165 (239)
T PRK01723 157 RFHDAGVYH 165 (239)
T ss_pred HHHHCCCCC
Confidence 777888877
No 345
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=60.67 E-value=95 Score=29.56 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=25.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+-|+.|..|.||+|..+++.+ ..+..|++|+...
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~---~~~~~v~~k~~~~ 45 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKP---GKEEEVFVKTVKD 45 (280)
T ss_pred eeeecccCCceEEEEEEecCCC---CceeEEEEEEccC
Confidence 3568999999999999875211 1258899998654
No 346
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=60.57 E-value=12 Score=38.14 Aligned_cols=31 Identities=19% Similarity=0.165 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.||.|+-|+||+|+... .|+.||||+...
T Consensus 5 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~ 35 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPR-------DGKRVALKKMPN 35 (372)
T ss_pred cceeeeCCCEEEEEEEECC-------CCCEEEEEeccc
Confidence 4679999999999999764 268999998754
No 347
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=60.48 E-value=12 Score=35.70 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=27.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
+.|+.|+-|+||+|+.+.+ |+.||||+..+...
T Consensus 7 ~~ig~g~~g~v~~~~~~~~-------~~~vaiK~~~~~~~ 39 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPT-------GTIMAVKRIRATVN 39 (283)
T ss_pred EEecccCCeEEEEEEEcCC-------CcEEEEEEEecCCC
Confidence 5689999999999998752 69999999887654
No 348
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.22 E-value=43 Score=34.05 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHH
Q 012848 265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344 (455)
Q Consensus 265 ~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~ 344 (455)
|..+-+.+.+.+|.+ +| -+.+++.-|.|-|.|+=.. | ..++-||+..-.-
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-----g----~~~~FvK~n~~~~---------------- 51 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-----G----TDPFFVKCNQREQ---------------- 51 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-----C----CcceEEEecchhh----------------
Confidence 677888999999986 43 3478888888888777443 4 5789999753210
Q ss_pred HHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCC--CCCCeEEeecccCcccc
Q 012848 345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVS 420 (455)
Q Consensus 345 l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~l--st~rVLVmE~i~G~~i~ 420 (455)
+ -=|..||.+++.+++ ...|.||+|+.-= -+..+|||||++--+++
T Consensus 52 ----------------~----------~~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 52 ----------------L----------SMFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ----------------H----------HHHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 1 124788888887765 3469999999432 35578999999987776
No 349
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=60.15 E-value=50 Score=32.76 Aligned_cols=31 Identities=19% Similarity=0.106 Sum_probs=24.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
+.|+.|+-|.||+|+.+.. + .|+.||||+..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~-~----~~~~~aiK~~~ 36 (332)
T cd07857 6 KELGQGAYGIVCSARNAET-S----EEETVAIKKIT 36 (332)
T ss_pred EEccccCCeEEEEEEeCCC-C----cCceEEEEEec
Confidence 5688999999999998642 1 15889999864
No 350
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=58.76 E-value=8.7 Score=39.07 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=27.6
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.+|||||.|-.|.|.--. .|++|||||-.-.++
T Consensus 21 rkiGsGSFGdIy~~~~i~-------~ge~VAiK~Es~~a~ 53 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISIT-------SGEEVAIKLESSKAK 53 (341)
T ss_pred EeecCCchhheeeeeecc-------CCceEEEEeecccCC
Confidence 689999999999998754 379999999766654
No 351
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=58.58 E-value=19 Score=33.98 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=27.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
-+.+|.|+-|+||+|++..+ + ..+..||||+.+.+.
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~--~--~~~~~vaiK~~~~~~ 39 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQD--D--GSQLKVAVKTMKLDI 39 (273)
T ss_pred ccccCcCCCceEEEEEEecC--C--CCcceEEEEEeccCc
Confidence 35789999999999999752 1 124789999987654
No 352
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=57.11 E-value=22 Score=35.03 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=28.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.+.+|.|+-|+||+|+.+.+ | ...+.+||||+..+...
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~--~-~~~~~~vaiK~~~~~~~ 49 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPE--G-EKVKIPVAIKELREATS 49 (316)
T ss_pred eeeeecCCCceEEEEEEecC--C-CccceeEEEEeccccCC
Confidence 47899999999999998652 2 11235699999876543
No 353
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=56.37 E-value=14 Score=37.22 Aligned_cols=30 Identities=27% Similarity=0.164 Sum_probs=25.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
.++++.|+.|.||+|+.+.+ |+.||||+..
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~-------~~~vaiK~~~ 50 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVT-------GQNVAIKKLS 50 (353)
T ss_pred EEEeccCCCEEEEEEEECCC-------CCEEEEEecC
Confidence 47899999999999998752 6899999864
No 354
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=56.10 E-value=15 Score=35.43 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=33.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC-----cccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-----VGESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg-----V~~~i~~DL~il~~l 342 (455)
.+.|+.++-|.||+|+.+.+ |+.||||+.+.. ..+.+..++.+++.+
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l 58 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVT-------NETIALKKIRLEQEDEGVPSTAIREISLLKEM 58 (294)
T ss_pred EEEecCCCCEEEEEEEecCC-------CcEEEEEehhhccccccchHHHHHHHHHHHhc
Confidence 35788999999999998752 689999987643 223455666666654
No 355
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=56.01 E-value=17 Score=35.13 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=32.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCccc-----chHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE-----SIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~-----~i~~DL~il~~l 342 (455)
.+.|+.|+.|+||+|+.+.+ |+.||||+....... .+...+.+++.+
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l 64 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKT-------GRVVALKKILMHNEKDGFPITALREIKILKKL 64 (311)
T ss_pred EEEeccCCCEEEEEEEECCC-------CcEEEEEEEEeccCCCCcchhHHHHHHHHHhc
Confidence 46799999999999998752 689999987654322 334455555533
No 356
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=55.58 E-value=50 Score=35.29 Aligned_cols=30 Identities=13% Similarity=-0.042 Sum_probs=22.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.+-+|.|..|.||+|.-.. ++ ++.||+|..
T Consensus 72 ~~~lg~G~~g~vy~a~~~~--~~----~~~vv~K~~ 101 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGS--DP----KEKVVAKFV 101 (478)
T ss_pred EEEEEeCCCcEEEEEEEcC--CC----CeEEEEEEc
Confidence 4668999999999998654 11 578999953
No 357
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=55.30 E-value=40 Score=33.32 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=53.6
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
-+|+..|--.+||+.+..+... .+..|+++++|+-.++...
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~-~~~~~~~~vlRi~~~~~~~-------------------------------------- 43 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDA-LSDEPRKVLLRVYGQSVEL-------------------------------------- 43 (302)
T ss_pred EEEecCcccceeEEEEcCCccc-ccCCCCeEEEEEecCCCcc--------------------------------------
Confidence 3677888888999888753100 1123578999985554321
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~ 421 (455)
..|..+|.+++....+. .+ .|+++ .+.+..++|||++|.++.+
T Consensus 44 --~~~r~~E~~~~~~l~~~-----g~-~P~~~--~~~~~~~v~e~i~G~~l~~ 86 (302)
T cd05156 44 --LIDRERELVVFARLSER-----NL-GPKLY--GIFPNGRIEEFIPSRTLTT 86 (302)
T ss_pred --eechHHHHHHHHHHHhC-----CC-CCceE--EEeCCCchhheeCCCcCCH
Confidence 13446666666665542 22 58877 3455778999999998864
No 358
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=55.24 E-value=14 Score=35.93 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=27.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.+++|+.|+||+|+.++. |+.||||+.+..
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~-------~~~~avK~~~~~ 51 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKT-------GHVMAVKQMRRT 51 (296)
T ss_pred eeEeeccCCeEEEEEEECCC-------CeEEEEEEEecc
Confidence 57899999999999998752 689999998754
No 359
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=55.06 E-value=32 Score=33.64 Aligned_cols=39 Identities=23% Similarity=0.165 Sum_probs=29.1
Q ss_pred ChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 279 ~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+++.|... +-++.|+.|+||+|+.+.+ |+.||+|+...
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~-------~~~v~iK~~~~ 50 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRT-------NEVVAIKKMSY 50 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCC-------CcEEEEEEEec
Confidence 444445433 5699999999999998752 68999998753
No 360
>PTZ00036 glycogen synthase kinase; Provisional
Probab=54.26 E-value=17 Score=38.44 Aligned_cols=46 Identities=20% Similarity=0.119 Sum_probs=33.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
.+.||.|+-|.||+|+.++. |+.||||+...+- ......+.+|+.+
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~-------~~~vAiK~i~~~~-~~~~~Ei~il~~l 116 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDT-------SEKVAIKKVLQDP-QYKNRELLIMKNL 116 (440)
T ss_pred eEEEEeCCCEEEEEEEECCC-------CCEEEEEEEecCc-chHHHHHHHHHhc
Confidence 46789999999999998752 6899999775442 2334556665544
No 361
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=54.16 E-value=7.9 Score=43.44 Aligned_cols=42 Identities=26% Similarity=0.141 Sum_probs=35.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la 343 (455)
-+=+|||+-|-|++|+|++ +.|||| .|++.=+.|++-|+.+-
T Consensus 129 LeWlGSGaQGAVF~Grl~n---------etVAVK----KV~elkETdIKHLRkLk 170 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN---------ETVAVK----KVRELKETDIKHLRKLK 170 (904)
T ss_pred hhhhccCcccceeeeeccC---------ceehhH----HHhhhhhhhHHHHHhcc
Confidence 4678999999999999985 899999 56777889999888764
No 362
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=53.32 E-value=90 Score=29.92 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=23.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
.+.++.|+.|.||++...+.. ....+..|++|+.
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~--~~~~~~~~~~k~~ 43 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLL--PEQDKMLVAVKAL 43 (280)
T ss_pred ccccCCccCCeEEEeEEecCC--CCCCceEEEEEec
Confidence 467889999999999864310 1123578999863
No 363
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=53.20 E-value=21 Score=34.49 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|+.|+||+|+.+. .|+.||||+...
T Consensus 17 ~~~lg~g~~~~v~~~~~~~-------~~~~~aik~~~~ 47 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKK-------TKQIVALKKVLM 47 (310)
T ss_pred EEEeecCCCEEEEEEEECC-------CCcEEEEEEEec
Confidence 4679999999999999865 268999997653
No 364
>PHA03209 serine/threonine kinase US3; Provisional
Probab=51.81 E-value=19 Score=36.49 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=30.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~ 341 (455)
.+.|+.|+-|+||+|+.+. .++.||+|+...+. ...+..+++.
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~-------~~~~valK~~~~~~---~~~E~~~l~~ 113 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPG-------QPDPVVLKIGQKGT---TLIEAMLLQN 113 (357)
T ss_pred EEEecCCCCeEEEEEEECC-------CCceEEEEeCCccc---cHHHHHHHHh
Confidence 4689999999999999865 26899999865543 2334444443
No 365
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=51.05 E-value=97 Score=30.89 Aligned_cols=30 Identities=7% Similarity=-0.096 Sum_probs=22.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
-+|++.|....||+....+ | ..++|+-++.
T Consensus 27 i~~~~~G~~n~~y~v~t~~--------~-~~vLK~~~~~ 56 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDV--------G-RYILTLYEKR 56 (307)
T ss_pred ccccCCccccceEEEEeCC--------C-cEEEEEecCC
Confidence 4788999999999876432 3 5778987764
No 366
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=49.70 E-value=74 Score=32.95 Aligned_cols=28 Identities=25% Similarity=0.184 Sum_probs=24.1
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEe
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKV 323 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKV 323 (455)
-+-+|.||-|.||.|+.+++ |+..|||-
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~-------g~~~AvK~ 49 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKT-------GELMAVKS 49 (313)
T ss_pred hccccCccceEEEEEEecCC-------Ccceeeee
Confidence 46789999999999999863 68999994
No 367
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=49.31 E-value=32 Score=33.32 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=49.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l 368 (455)
.+||++|-=|=||+. . |.+.++|+.+|+.. ..
T Consensus 6 ~~~i~~G~t~~~y~~---~--------~~~~VlR~~~~~~~---------------------------~~---------- 37 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---K--------TGKWMLKLYNPGFD---------------------------KE---------- 37 (226)
T ss_pred heeecCCCCcceeEe---c--------CCCEEEEeCCCCCC---------------------------HH----------
Confidence 489999999999972 1 34688998877641 00
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCC--CCCCCeEEeecccCcc
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGEC 418 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~--lst~rVLVmE~i~G~~ 418 (455)
+.++|++.+..+.. ..+.+|+|+.- -...--++|||++|.+
T Consensus 38 ----~i~~E~~~l~~l~~-----~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 38 ----TIKREFDASRKVFS-----LGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred ----HHHHHHHHHHHHHH-----cCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 12668888877652 35778888731 2233367999999984
No 368
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=49.05 E-value=25 Score=35.14 Aligned_cols=33 Identities=21% Similarity=0.125 Sum_probs=27.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.++++.|+.|.||+|+...+ |+.||||..++..
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~-------~~~vaiK~~~~~~ 42 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSET-------NEKVAIKKIANAF 42 (337)
T ss_pred EEEeccCCCeEEEEEEecCC-------CCeEEEEEecccc
Confidence 46899999999999997642 6899999987653
No 369
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=48.76 E-value=23 Score=36.91 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=41.8
Q ss_pred HhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC-----cccchHhHHHHHHHHHH
Q 012848 281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-----VGESIRRDFVIINLAAK 344 (455)
Q Consensus 281 ~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg-----V~~~i~~DL~il~~la~ 344 (455)
-+.|+.+|. +|.|+.|=||+|+.+.+ |+.||+|..+=. +...-.+.+.+++.+..
T Consensus 10 ~~~~~~~ek--lGeGtyg~Vykar~~~~-------g~~VALKkirl~~~~EG~P~taiREisllk~L~~ 69 (323)
T KOG0594|consen 10 MFDYEKVEK--LGEGTYGVVYKARSKRT-------GKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH 69 (323)
T ss_pred HHHHHHHHH--hCCCCceEEEEEEEecC-------CCEEEEEEEeccccccCCCchhhHHHHHHHHhCC
Confidence 345555665 99999999999999863 699999998755 44555777778777653
No 370
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=48.69 E-value=25 Score=34.98 Aligned_cols=33 Identities=21% Similarity=0.044 Sum_probs=27.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|.-|+||+|+.+.+ |+.||||+.+...
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~-------~~~valK~~~~~~ 42 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRS-------GKKVAIKKIPHAF 42 (334)
T ss_pred eeeeecCCCeEEEEEEEcCC-------CCEEEEEEecccc
Confidence 36799999999999998752 6899999987653
No 371
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=48.47 E-value=20 Score=39.53 Aligned_cols=58 Identities=24% Similarity=0.291 Sum_probs=44.0
Q ss_pred CCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC-----CCcccchHhHHHHHHHHH
Q 012848 277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH-----PGVGESIRRDFVIINLAA 343 (455)
Q Consensus 277 G~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr-----PgV~~~i~~DL~il~~la 343 (455)
+..-.+.|+.+| -||-|--||||||+-..+ |+-||+|=.+ ||.-..+.+.+.||+.+-
T Consensus 112 ~~r~~~~feki~--kIGeGTyg~VYkAr~~~t-------gkivALKKvr~d~~~~~~~~t~~REI~ILr~l~ 174 (560)
T KOG0600|consen 112 GPRRADSFEKIE--KIGEGTYGQVYKARDLET-------GKIVALKKVRFDNEKEGFPITAIREIKILRRLD 174 (560)
T ss_pred cccchHHHHHHH--HhcCcchhheeEeeeccc-------CcEEEEEEeecccCCCcchHHHHHHHHHHHhcC
Confidence 334455566555 489999999999998763 6899998554 777778899999999764
No 372
>PRK12274 serine/threonine protein kinase; Provisional
Probab=47.89 E-value=33 Score=33.81 Aligned_cols=66 Identities=18% Similarity=0.091 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCC
Q 012848 375 AREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLN 454 (455)
Q Consensus 375 r~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv 454 (455)
++|++.+++.. + ...+|+++. .....++|||++|..+.+.... +. ..+...+.+ .++.+-..|++
T Consensus 49 ~rE~~iL~~L~----~--~~~vP~ll~--~~~~~lvmeyI~G~~L~~~~~~----~~--~~~~~qi~~-~L~~lH~~GIv 113 (218)
T PRK12274 49 RREALALRQLD----G--LPRTPRLLH--WDGRHLDRSYLAGAAMYQRPPR----GD--LAYFRAARR-LLQQLHRCGVA 113 (218)
T ss_pred HHHHHHHHhcC----C--CCCCCEEEE--EcCEEEEEeeecCccHHhhhhh----hh--HHHHHHHHH-HHHHHHHCcCc
Confidence 67888887553 2 245788864 2567999999999988643211 11 122222222 45567777887
Q ss_pred C
Q 012848 455 N 455 (455)
Q Consensus 455 ~ 455 (455)
|
T Consensus 114 H 114 (218)
T PRK12274 114 H 114 (218)
T ss_pred c
Confidence 7
No 373
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=47.50 E-value=30 Score=35.56 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=35.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc----cchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG----ESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~----~~i~~DL~il~~l 342 (455)
.+.+|.|+-|.||+|+... .|+...++.||||+.+.... +.+...+.+++.+
T Consensus 43 ~~~LG~G~fg~V~~~~~~~--~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l 98 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFG--LGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHL 98 (374)
T ss_pred hheecCCCcccEEEEEEec--CCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhh
Confidence 4789999999999998653 23333467899999876543 2344555555544
No 374
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=47.40 E-value=26 Score=39.12 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=38.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCccc----chHhHHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE----SIRRDFVIINLAA 343 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~----~i~~DL~il~~la 343 (455)
++|+|..|||++|.++.--.+.......||||....+..+ .+...+.+|+.+.
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g 359 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG 359 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc
Confidence 9999999999999997421111112579999999999887 4455555666555
No 375
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=46.97 E-value=49 Score=36.23 Aligned_cols=27 Identities=30% Similarity=0.169 Sum_probs=20.9
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
-||.|.=|+||+|.-... ++.||||+.
T Consensus 33 ~IG~G~sa~V~~A~c~p~-------~e~VAIK~i 59 (516)
T KOG0582|consen 33 VIGVGASAVVYLARCIPT-------NEVVAIKII 59 (516)
T ss_pred EEeccceeEeeeeeeccc-------CCEEEEEEe
Confidence 356665599999999752 699999953
No 376
>PHA03207 serine/threonine kinase US3; Provisional
Probab=46.53 E-value=31 Score=35.53 Aligned_cols=47 Identities=19% Similarity=0.166 Sum_probs=34.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
.+.|+.|+-|+||+|+.++. ..+++||||+...+ ......+.+++.+
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~-----~~~~~v~vK~~~~~--~~~~~E~~il~~l 143 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGD-----EQRKKVIVKAVTGG--KTPGREIDILKTI 143 (392)
T ss_pred EEeecCCCCeEEEEEEEcCC-----ccceeEEEEecccc--ccHHHHHHHHHhc
Confidence 36799999999999987542 13589999998765 3445666666654
No 377
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=46.26 E-value=29 Score=33.97 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=28.5
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCccc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE 330 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~ 330 (455)
.+.||+|+.|+||+|+.+.+ |. .-...||+|+..+....
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~--~~-~~~~~vaiK~~~~~~~~ 50 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPE--GE-TVKIPVAIKILNETTGP 50 (303)
T ss_pred ccccccCCCccEEEEEEecC--CC-cceeeEEEEeccccCCH
Confidence 46899999999999998752 21 11247899999877654
No 378
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=45.74 E-value=28 Score=35.08 Aligned_cols=38 Identities=26% Similarity=0.253 Sum_probs=28.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.++||.|+-|.||+|+.... +....|+.||||+.+...
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~--~~~~~~~~va~K~~~~~~ 49 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGI--EKSASCRTVAVKMLKEGA 49 (337)
T ss_pred hcccccCcCceEEecccccc--ccccccceeeeeeccCCC
Confidence 47899999999999987542 222346899999877543
No 379
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=45.60 E-value=29 Score=33.29 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=27.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
.+.|+.|+.|.||+++.+.+ |+.||||......
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~-------~~~~aiK~~~~~~ 41 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPS-------GTIMAVKRIRSTV 41 (288)
T ss_pred HHHhCCCCceEEEEEEECCC-------CCEEEEEEehhcc
Confidence 45789999999999998652 6899999887654
No 380
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=45.00 E-value=32 Score=33.13 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=26.4
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.|+.+.-|.||+|+.+.+ |+.|+||.....
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~ 41 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKT-------GEIVALKKLKME 41 (293)
T ss_pred hhhhcCCCCeEEEEEEECCC-------CcEEEEEEEeec
Confidence 47889999999999998752 689999987644
No 381
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=44.61 E-value=48 Score=31.65 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=30.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHh
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRR 334 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~ 334 (455)
+.+|.|+.|-||+|+..+..+ ..+++.||||+.+.........
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~ 53 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAP--GEQTQAVAIKTLKDKAEGPLRE 53 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCC--CCceeEEEEEEccCCCCHHHHH
Confidence 467899999999999864211 2246899999998665544333
No 382
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=44.43 E-value=27 Score=36.90 Aligned_cols=46 Identities=26% Similarity=0.198 Sum_probs=37.6
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHH
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~ 341 (455)
+.+-+|+||.|=||+|++.++ +++||||=.-|+=+ .-.+.+.+|+.
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~-------~~~vAIKKv~~d~r-~knrEl~im~~ 73 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRET-------EEEVAIKKVLQDKR-YKNRELQIMRK 73 (364)
T ss_pred eeEEEeecccceEEEEEEcCC-------CceeEEEEecCCCC-cCcHHHHHHHh
Confidence 467899999999999999873 58999997777654 45788888883
No 383
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=44.19 E-value=76 Score=36.72 Aligned_cols=30 Identities=33% Similarity=0.144 Sum_probs=24.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr 325 (455)
++-||.|=.||||.|.... | |.++|+|-+.
T Consensus 42 ~~vLAEGGFa~VYla~~~~---~----~~~~AlKrm~ 71 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVK---G----GKKYALKRMY 71 (738)
T ss_pred EEEEccCCcEEEEEEEecC---C----Cceeeeeeee
Confidence 4789999999999999975 2 4899999554
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=43.36 E-value=32 Score=38.15 Aligned_cols=36 Identities=19% Similarity=0.088 Sum_probs=27.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
.+.||.|+-|+||+|++.++ + ...|+.||||.....
T Consensus 137 ~~~LG~G~FG~VYka~~~~~--~-~~~~~~vAvK~~~~~ 172 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNK--Q-SKKEGKYVLKKATEY 172 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCC--c-cccCcEEEEEEeccc
Confidence 57899999999999999751 1 123689999987653
No 385
>PHA03212 serine/threonine kinase US3; Provisional
Probab=40.71 E-value=32 Score=35.80 Aligned_cols=43 Identities=9% Similarity=-0.013 Sum_probs=31.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
+.||.|+-|.||+|.-+.. |+.||||+.. .+.+...+.+++.+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~-------~~~vaiK~~~---~~~~~~E~~il~~l 140 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKT-------CEHVVIKAGQ---RGGTATEAHILRAI 140 (391)
T ss_pred EEEcCCCCeEEEEEEECCC-------CCEEEEechh---hhhhHHHHHHHHhC
Confidence 5689999999999998652 6899999754 23455666666554
No 386
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=40.49 E-value=44 Score=32.89 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=34.8
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc-----cchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----ESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~-----~~i~~DL~il~~l 342 (455)
.+.|+.++-|-||+|+.... |+.||||+.++... +.+..++.+++.+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l 56 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRT-------GRKVAIKKISNVFDDLIDAKRILREIKLLRHL 56 (330)
T ss_pred eeeecCCCCeEEEEEEeCCC-------CcEEEEEeeccccccchhhhhHHHHHHHHHhc
Confidence 36799999999999998642 68999999887542 3455566665544
No 387
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=37.87 E-value=38 Score=38.30 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=25.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+-||-||-|-||||+-|.+ ++.||+|+.-.-
T Consensus 8 e~iG~Gsfg~VYKgrrK~t-------~~~vAik~i~K~ 38 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYT-------IQVVAIKFIDKS 38 (808)
T ss_pred HHhcCCccceeeecccccc-------eeEEEEEEehhc
Confidence 4578999999999998852 699999987543
No 388
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=36.90 E-value=27 Score=38.29 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=33.8
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN 340 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~ 340 (455)
+-+|.|=-|-|++|.|.+ +.|||||-.+.=++.+...=.|..
T Consensus 216 eli~~Grfg~V~KaqL~~---------~~VAVKifp~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDN---------RLVAVKIFPEQEKQSFQNEKNIYS 257 (534)
T ss_pred HHhhcCccceeehhhccC---------ceeEEEecCHHHHHHHHhHHHHHh
Confidence 467899999999999974 899999988877777766555443
No 389
>PRK06149 hypothetical protein; Provisional
Probab=35.36 E-value=1.4e+02 Score=35.47 Aligned_cols=60 Identities=15% Similarity=0.095 Sum_probs=43.8
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 252 ~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
-+..+....|..+.+++++++++.||-.- +-.++++... ++|+-+..+ ...++||-+|+.
T Consensus 6 ~~~~~~~~~p~ls~~~~~~ll~~~ygl~~-------~~~~L~s~~d-~nf~v~t~~---------~~yVLKi~~~~~ 65 (972)
T PRK06149 6 LIDRSSLPAPDVSEAQAERILAEHYGLSG-------TLTELGSQQD-RNFRVDSDG---------GRFVLKICHAAY 65 (972)
T ss_pred hhccCCCCCCCCCHHHHHHHHHHhcCCce-------EEEecCCcCc-ceEEEEecC---------CcEEEEeCCccC
Confidence 35567778899999999999999999641 1356666665 788766532 367789999863
No 390
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=35.27 E-value=40 Score=36.09 Aligned_cols=141 Identities=12% Similarity=0.248 Sum_probs=69.0
Q ss_pred CCCHHHHHHHHHHHhCCChHhhcc-cccccccc--ccCcceEEEeEecccCCC---CCcCCeEEEEEeeCCCcccchHhH
Q 012848 262 EHSFAYTKKTIERAFGRRLSEIFD-GFEEAPVA--SGSIAQVHRASLRFRYPG---QKVKPIVVAVKVRHPGVGESIRRD 335 (455)
Q Consensus 262 p~~~~~v~~vle~elG~~~~eiF~-~fd~~PiA--SASIAQVHrA~Lk~~~~G---~~~~G~~VAVKVqrPgV~~~i~~D 335 (455)
...|+++++.|++.+|-+. -|- +-.-+.|| -|-..++.+.++. ..| +..-.+.|||||--.-
T Consensus 12 hvtw~dve~~l~~~l~t~a--~~g~~~~~~~Igdg~GFmS~I~lV~~d--W~~~~~~~~LP~k~vlKI~S~~-------- 79 (414)
T PF07914_consen 12 HVTWEDVEEALQEALGTKA--KFGENKKATNIGDGKGFMSRIALVEPD--WTGEEEDENLPKKFVLKIPSQL-------- 79 (414)
T ss_pred ceeHHHHHHHHHHHhCCCc--CcCCCcceeeccCCcchheeEEEEEee--eccCccccCCCceEEEEeccHh--------
Confidence 4579999999999998532 110 11122333 3444445554442 111 1122579999975321
Q ss_pred HHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHhCCC--CCeEeCcccCC--C----CCC
Q 012848 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS-RFIYNFRRW--KDVSFPKPVYP--L----VHP 406 (455)
Q Consensus 336 L~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~-rf~~~f~~~--~~V~vP~~~~~--l----st~ 406 (455)
. ++.+...+..- +-..++-....++|... .++.-|.| .|.+.|..+ +.+.+|++|.- + .++
T Consensus 80 -~-~~~~~~~~~~~-~~~~~~~e~~~~~~~~~-------l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~k 149 (414)
T PF07914_consen 80 -A-LRALSENMKFE-GGKGFDEEKEWEEFEKF-------LREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLK 149 (414)
T ss_pred -h-HHHHHHhhccc-cccccchhhHHHHHHHH-------HHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCC
Confidence 1 12222221110 00111111102222221 23333443 234444443 68999999841 2 245
Q ss_pred CeEEeecccCccccchhH
Q 012848 407 AVLVETYEQGECVSRYVD 424 (455)
Q Consensus 407 rVLVmE~i~G~~i~~~~~ 424 (455)
-+++|||+++...-++.+
T Consensus 150 G~IimE~ven~~~~~~~e 167 (414)
T PF07914_consen 150 GFIIMEYVENVHSMDMYE 167 (414)
T ss_pred CEEEEeccCCceeecccC
Confidence 799999999986665443
No 391
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=35.11 E-value=50 Score=31.30 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=26.2
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV 328 (455)
+.++.|+-|+||+|+.+.+ |+.||||+.+...
T Consensus 5 ~~lg~g~~~~v~~~~~~~~-------~~~~aik~~~~~~ 36 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKT-------GKYYAIKCMKKHF 36 (282)
T ss_pred eeccccccceEEEEEEcCC-------CcEEEEEEehhcc
Confidence 4678999999999998752 6899999987654
No 392
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=34.85 E-value=46 Score=37.29 Aligned_cols=47 Identities=26% Similarity=0.158 Sum_probs=37.3
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEee------CCCcccchHhHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR------HPGVGESIRRDFVIINLAA 343 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq------rPgV~~~i~~DL~il~~la 343 (455)
.-+|=|.-|+||+|+-.+. |+.||+||. .|+.++.+...++|-+.+.
T Consensus 24 ~~LGkGgFA~cYe~~~~~t-------ge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~ 76 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDT-------GEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK 76 (592)
T ss_pred eeeccCcceEEEEEEEcCC-------CcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC
Confidence 5689999999999998653 799999986 5677777777777766554
No 393
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=33.72 E-value=35 Score=34.83 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=10.4
Q ss_pred eEEeecccCccccchh
Q 012848 408 VLVETYEQGECVSRYV 423 (455)
Q Consensus 408 VLVmE~i~G~~i~~~~ 423 (455)
.|+|||++|.++.+..
T Consensus 124 ~liMeyv~G~~L~e~~ 139 (275)
T PF09192_consen 124 FLIMEYVPGKPLNELN 139 (275)
T ss_dssp EEEEE---EEESTT--
T ss_pred HHHHHhcCCCCccccC
Confidence 8999999999998763
No 394
>PHA03211 serine/threonine kinase US3; Provisional
Probab=33.14 E-value=53 Score=35.36 Aligned_cols=44 Identities=20% Similarity=0.107 Sum_probs=31.9
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
...++.|+-|.||+|+..+. |+.||||.... ..+..++.+|+.+
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~-------~~~vavK~~~~---~~~~~E~~iL~~L 217 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDY-------PQRVVVKAGWY---ASSVHEARLLRRL 217 (461)
T ss_pred EEEEccCCCeEEEEEEECCC-------CCEEEEecccc---cCHHHHHHHHHHC
Confidence 46799999999999998752 68999996432 3345566666554
No 395
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=32.06 E-value=1.5e+02 Score=31.48 Aligned_cols=85 Identities=22% Similarity=0.159 Sum_probs=52.3
Q ss_pred ccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccc-cCHHHHHHHHHHHHHH
Q 012848 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW-LRLDESVQQFAVFMMS 370 (455)
Q Consensus 292 iASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~-l~l~e~v~ef~~~l~~ 370 (455)
||-|-+.=|||....+ | ++.|+||---|-++. .+. .| ++++-.
T Consensus 3 igdGnlN~VfrV~~~~---g----~~svIVKQAlp~vRv------------------~g~-~wpl~~~R~---------- 46 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQE---G----DRAAIVKQALPYVRV------------------VGE-SWPLTLDRA---------- 46 (370)
T ss_pred CCCCceEEEEEEEcCC---C----CeeEEEEEcCHHHhh------------------cCC-CCCCCccHH----------
Confidence 5778888999999742 2 478999966655431 110 11 111111
Q ss_pred hcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCcccc
Q 012848 371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 371 ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~ 420 (455)
+.|+.-+....+... =.+|++|.--....++|||+++...+-
T Consensus 47 ----~~E~~~L~~~~~~~P----~~vP~vy~~D~e~~~~vMEdL~~~~il 88 (370)
T TIGR01767 47 ----RIESSALIRQGEHVP----HLVPRIFHFDTEMAVTVMEDLSHHKIA 88 (370)
T ss_pred ----HHHHHHHHHhhccCc----cccCeEEEEccccceehHhhCccchHH
Confidence 456766665544322 269999965566678999999775543
No 396
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=31.39 E-value=3.4e+02 Score=30.27 Aligned_cols=96 Identities=20% Similarity=0.172 Sum_probs=57.1
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHH-ccccCccccCHHHHHHHHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS-SVIPAVKWLRLDESVQQFAVFM 368 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~-~~~P~l~~l~l~e~v~ef~~~l 368 (455)
+-||+|+-|-|-.|.-.. +|+-|||||.+-- .+..... -..|.++...++.+
T Consensus 103 ~eiG~G~yGkVkLar~~~-------~~~l~AiKil~K~------------~~~~~~~~~~~~a~~~~~~ekv-------- 155 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEV-------DGKLYAIKILPKK------------ELRRQYGFPRQPAMKLMPIEKV-------- 155 (576)
T ss_pred hhhcCCccceEEEEeecC-------CCcEEEEEeechh------------hhhhhcccccccccccCcHHHH--------
Confidence 568999999999998754 3699999998642 1111100 01222222222222
Q ss_pred HHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCC-CCCCeEEeecccCccccch
Q 012848 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRY 422 (455)
Q Consensus 369 ~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~l-st~rVLVmE~i~G~~i~~~ 422 (455)
++|-+-+++.. +..-|..=+++.+- ++.=-||.||+.+-++...
T Consensus 156 ------~~EIailKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~ 200 (576)
T KOG0585|consen 156 ------RREIAILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC 200 (576)
T ss_pred ------HHHHHHHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccC
Confidence 44555555443 22346666777664 4555599999998777653
No 397
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=29.93 E-value=2.9e+02 Score=31.02 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=26.4
Q ss_pred ChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEee
Q 012848 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324 (455)
Q Consensus 279 ~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVq 324 (455)
++.+.|..|. =||.|+=|=||-|+-.. .++.||||..
T Consensus 270 dP~~~y~~~~--kigqgaSG~vy~A~~~~-------~~~~VaiK~m 306 (550)
T KOG0578|consen 270 DPRSKYTDFK--KIGQGATGGVYVARKIS-------TKQEVAIKRM 306 (550)
T ss_pred Chhhhhcchh--hhccccccceeeeeecc-------CCceEEEEEE
Confidence 4445555444 57889999999998764 2688999953
No 398
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=29.58 E-value=75 Score=33.12 Aligned_cols=43 Identities=23% Similarity=0.282 Sum_probs=30.9
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCc-c---cchHhHHHHH
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-G---ESIRRDFVII 339 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV-~---~~i~~DL~il 339 (455)
.-+|+||-|||.+++.+.. |.-.|||-.+-.= + ++|-.|+.++
T Consensus 98 ~dlGsGtcG~V~k~~~rs~-------~~iiAVK~M~rt~Nkee~kRILmDldvv 144 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRST-------GHIIAVKQMRRTGNKEENKRILMDLDVV 144 (391)
T ss_pred HhhcCCCccceEEEEEccc-------ceEEEEEeecccCCHHHHHHHHHhhhHH
Confidence 3478999999999999873 6899999776542 2 2344555543
No 399
>PF12844 HTH_19: Helix-turn-helix domain; PDB: 3LIS_B 3LFP_A 2XIU_B 2GZU_B 2XJ3_A 1UTX_A 2XI8_B 3F6W_C 3EUS_B.
Probab=29.34 E-value=2.5e+02 Score=21.08 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhccccc
Q 012848 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288 (455)
Q Consensus 218 ~~l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~~fd 288 (455)
++|+...+..|-+--++++.+... ...+++....-.. |.......|.+.||.+++++|..-|
T Consensus 2 ~~lk~~r~~~~lt~~~~a~~~~i~--------~~~i~~~e~g~~~-~~~~~l~~i~~~~~v~~~~l~~~~~ 63 (64)
T PF12844_consen 2 ERLKELREEKGLTQKDLAEKLGIS--------RSTISKIENGKRK-PSVSTLKKIAEALGVSLDELFDGED 63 (64)
T ss_dssp HHHHHHHHHCT--HHHHHHHHTS---------HHHHHHHHTTSS---BHHHHHHHHHHHTS-HHHHCCCHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcC--------HHHHHHHHCCCcC-CCHHHHHHHHHHhCCCHHHHhccCC
Confidence 456777778887777777766542 4556666666553 3344557778999999999987554
No 400
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=29.01 E-value=2.8e+02 Score=28.35 Aligned_cols=83 Identities=12% Similarity=0.171 Sum_probs=55.3
Q ss_pred ccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHH
Q 012848 286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA 365 (455)
Q Consensus 286 ~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~ 365 (455)
++.-+|+..|-=-++|+-+..+. ..++.+|+||+-.++.+..
T Consensus 16 ~i~i~~l~gGlTN~~~~v~~~~~----~~~~~~~v~Ri~g~~t~~~---------------------------------- 57 (330)
T PLN02421 16 DFSVERISGGITNLLLKVSVKEE----NGNEVSVTVRLFGPNTDYV---------------------------------- 57 (330)
T ss_pred ceEEEEeCCcccceEEEEEecCC----CCCCceEEEEEecCCcCeE----------------------------------
Confidence 56678898999999999887531 1123589999888874321
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCcccc
Q 012848 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420 (455)
Q Consensus 366 ~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~ 420 (455)
+|-.+|..+++...+. .+ -|+++.- .++-++.+|++|..++
T Consensus 58 ------IdR~~E~~il~~l~~~-----gl-~P~~l~~--~~~G~i~~fi~g~~l~ 98 (330)
T PLN02421 58 ------IDRERELQAIKYLSAA-----GF-GAKLLGV--FGNGMIQSFINARTLT 98 (330)
T ss_pred ------echHHHHHHHHHHHhc-----CC-CCceeEE--eCCcEeehhhcCCCCC
Confidence 3456677777766542 22 2666632 2455799999998875
No 401
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=28.24 E-value=63 Score=32.33 Aligned_cols=32 Identities=22% Similarity=0.157 Sum_probs=27.4
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.|+..++-+.|++++..+ |+++++||..|+-+
T Consensus 8 ~~~~~g~~s~V~pv~~~d--------G~~avLKl~~p~~~ 39 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRAD--------GTPAVLKLAPPHAE 39 (253)
T ss_pred CCCCCCcceEEEEEEcCC--------CCeEEEEecCCccc
Confidence 567889999999999865 69999999998654
No 402
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=28.15 E-value=4.4e+02 Score=23.87 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=26.0
Q ss_pred ccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccch
Q 012848 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332 (455)
Q Consensus 290 ~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i 332 (455)
+.++.|+.++|++|... ..+++|+..+.....-
T Consensus 6 ~~l~~g~~~~v~~~~~~----------~~~~~k~~~~~~~~~~ 38 (384)
T COG0515 6 RKLGEGSFGEVYLARDR----------KLVALKVLAKKLESKS 38 (384)
T ss_pred EeecCCCCeEEEEEEec----------cEEEEEeechhhccch
Confidence 45678888999999984 5799999888876544
No 403
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=26.41 E-value=1e+02 Score=30.58 Aligned_cols=31 Identities=26% Similarity=0.148 Sum_probs=25.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCC
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrP 326 (455)
.+.++.|..|.||+|+.+.. |+.||||..+.
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~-------~~~~~vK~~~~ 42 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRT-------KEVVALKKIFD 42 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCC-------CeEEEEEeecc
Confidence 36789999999999998652 68999998764
No 404
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=25.40 E-value=71 Score=32.47 Aligned_cols=45 Identities=29% Similarity=0.414 Sum_probs=36.3
Q ss_pred ccc-cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC------CCcccchHhHHH
Q 012848 286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH------PGVGESIRRDFV 337 (455)
Q Consensus 286 ~fd-~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr------PgV~~~i~~DL~ 337 (455)
+|| .+|+|=|=.|+||-|+-+.. +--||+||.. -+++.++++.+.
T Consensus 23 dfeigr~LgkgkFG~vYlarekks-------~~IvalKVlfKsqi~~~~v~~qlrREiE 74 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKS-------LFIVALKVLFKSQILKTQVEHQLRREIE 74 (281)
T ss_pred hccccccccCCccccEeEeeeccC-------CcEEEEeeeeHHHHHHhcchhhhhheeE
Confidence 566 79999999999999999863 6899999964 466777777665
No 405
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=25.24 E-value=75 Score=36.13 Aligned_cols=41 Identities=29% Similarity=0.557 Sum_probs=35.0
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~ 337 (455)
.+-||.|-.|-||...+.. +..||||..||+..+.-+.|+.
T Consensus 543 ~ekiGeGqFGEVhLCeveg--------~lkVAVK~Lr~~a~~~~r~~F~ 583 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEG--------PLKVAVKILRPDATKNARNDFL 583 (807)
T ss_pred hhhhcCcccceeEEEEecC--------ceEEEEeecCcccchhHHHHHH
Confidence 4678999999999999853 6999999999999887777764
No 406
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=25.04 E-value=56 Score=34.94 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccC
Q 012848 375 AREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416 (455)
Q Consensus 375 r~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G 416 (455)
..|--|+.|+.+. .+.+|.|+ .-.++||||.||--
T Consensus 333 EkEmhNL~RMq~~-----GlpcP~vV--~lkkhvLVMsFiGd 367 (531)
T KOG2269|consen 333 EKEMHNLSRMQKH-----GLPCPQVV--KLKKHVLVMSFIGD 367 (531)
T ss_pred HHHHHHHHHHHhc-----CCCCCcee--eeecceEEEEeecC
Confidence 4577888888753 67788888 78999999999963
No 407
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=24.53 E-value=1e+02 Score=29.56 Aligned_cols=38 Identities=26% Similarity=0.275 Sum_probs=26.2
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcc
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~ 329 (455)
.+.||.|+-|.||+|+...+ |+ .-..+|++|.......
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~--~~-~~~~~~~~k~~~~~~~ 49 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPE--GD-SIKIPVAIKTIQDRSG 49 (279)
T ss_pred ccccCccCCcceEEEEEcCC--CC-ceeeEEEEeecccccc
Confidence 46899999999999998652 21 0113688888865433
No 408
>PTZ00296 choline kinase; Provisional
Probab=24.17 E-value=6.7e+02 Score=27.12 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=69.5
Q ss_pred HHHHHhhhcCCCC-CCHHHHHHHHHHHhCCChHhh-ccccccccccccCcceEEEeEecccCCC-CCcCCeEEEEEeeCC
Q 012848 250 CKKLSELHSKAPE-HSFAYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPG-QKVKPIVVAVKVRHP 326 (455)
Q Consensus 250 ~~~L~~LqD~vpp-~~~~~v~~vle~elG~~~~ei-F~~fd~~PiASASIAQVHrA~Lk~~~~G-~~~~G~~VAVKVqrP 326 (455)
.++|..+-...-+ ...+.++.++.+..+ .|..+ -++++-+|+..|-=-++++.++.+.... ....|+.|+|+|-.+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3444444444222 334445555554433 23321 1356778999999999999988642000 011257899998888
Q ss_pred CcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCC
Q 012848 327 GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406 (455)
Q Consensus 327 gV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~ 406 (455)
|.+..| |-..|..++....+. + + -|+++. +.+
T Consensus 149 ~te~lI----------------------------------------dR~~E~~v~~~ls~~--g---i-~P~l~~--~f~ 180 (442)
T PTZ00296 149 DVDELY----------------------------------------NPISEFEVYKTMSKY--R---I-APQLLN--TFS 180 (442)
T ss_pred Ccccee----------------------------------------CHHHHHHHHHHHHHC--C---C-CCceEE--EeC
Confidence 765333 334455555544431 1 1 255663 446
Q ss_pred CeEEeecccCcccc
Q 012848 407 AVLVETYEQGECVS 420 (455)
Q Consensus 407 rVLVmE~i~G~~i~ 420 (455)
+..++||++|.+++
T Consensus 181 gg~I~efi~g~~l~ 194 (442)
T PTZ00296 181 GGRIEEWLYGDPLR 194 (442)
T ss_pred CCEEEEeeCCccCC
Confidence 78899999998765
No 409
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=23.52 E-value=73 Score=36.56 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=39.3
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC------cccchHhHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG------VGESIRRDFVIINLAA 343 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg------V~~~i~~DL~il~~la 343 (455)
.+-+|.||=|-|-.|+-..+ |+.+||||.--. .-..|++++.||+.+-
T Consensus 17 gkTLG~Gstg~vrlakh~~T-------GqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~ 70 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAET-------GQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE 70 (786)
T ss_pred cccccCCCCceehhhhcccc-------cceeEEEeeccccccccccccchhhhhHHHHHhc
Confidence 46789999999999988653 799999998655 3567899999998775
No 410
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=23.34 E-value=2.1e+02 Score=21.40 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=32.4
Q ss_pred HHHHHHHcCchHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChHhhcc
Q 012848 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFD 285 (455)
Q Consensus 220 l~~~le~lGp~fIKlGQ~lStR~DLlP~e~~~~L~~LqD~vpp~~~~~v~~vle~elG~~~~eiF~ 285 (455)
|...+++.|-+.-+|.+.+.- ++ ..++++..+-+..+-.+....|.+.||.+++|+|+
T Consensus 2 L~~~m~~~~it~~~La~~~gi-----s~---~tl~~~~~~~~~~~~~~~l~~ia~~l~~~~~el~~ 59 (63)
T PF13443_consen 2 LKELMAERGITQKDLARKTGI-----SR---STLSRILNGKPSNPSLDTLEKIAKALNCSPEELFE 59 (63)
T ss_dssp HHHHHHHTT--HHHHHHHHT-------H---HHHHHHHTTT-----HHHHHHHHHHHT--HHHCTE
T ss_pred HHHHHHHcCCCHHHHHHHHCc-----CH---HHHHHHHhcccccccHHHHHHHHHHcCCCHHHHhh
Confidence 456677777777777776642 33 24455555544444456677789999999999986
No 411
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=23.32 E-value=1.6e+02 Score=31.20 Aligned_cols=45 Identities=22% Similarity=0.211 Sum_probs=34.1
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeC-----CCcccchHhHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH-----PGVGESIRRDFVIINLA 342 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr-----PgV~~~i~~DL~il~~l 342 (455)
-+|-||-|=|++.+-+++ |+-||||.=. |-|++.--++++.|+-+
T Consensus 9 kvGEGSYGvV~KCrnk~T-------gqIVAIKkF~Esedd~~VkKIAlREIrmLKqL 58 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDT-------GQIVAIKKFVESEDDPVVKKIALREIRMLKQL 58 (396)
T ss_pred ccccCcceEEEEeccCCc-------ccEEEEEeeccCCccHHHHHHHHHHHHHHHhc
Confidence 378999999999999874 7999999754 55666666666666544
No 412
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=22.94 E-value=2.4e+02 Score=33.64 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=27.8
Q ss_pred ccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCC
Q 012848 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327 (455)
Q Consensus 288 d~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPg 327 (455)
+.+-+|+|..|-||||..-.. |. .-..+|||||..-.
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pe--ge-~vKipVaiKvl~~~ 736 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPE--GE-NVKIPVAIKVLIEF 736 (1177)
T ss_pred hhceeccccceeEEeeeEecC--Cc-eecceeEEEEeecc
Confidence 457799999999999999752 42 22378999997643
No 413
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=22.79 E-value=1.6e+02 Score=34.14 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=41.7
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCe--EEeecccCccccchhHHhhhchhhHHHHHHHHH-
Q 012848 365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAV--LVETYEQGECVSRYVDELQGHERLKSALAHIGT- 441 (455)
Q Consensus 365 ~~~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rV--LVmE~i~G~~i~~~~~~l~~~~~~~~~LA~~g~- 441 (455)
...+..|-|...||.|- .|=+.|+.+--+.- .||+||+|-.+..+ +-..+...+.||+-.+
T Consensus 673 vaHVKAERDILAEADn~-------------WVVrLyySFQDkdnLYFVMdYIPGGDmMSL---LIrmgIFeE~LARFYIA 736 (1034)
T KOG0608|consen 673 VAHVKAERDILAEADNE-------------WVVRLYYSFQDKDNLYFVMDYIPGGDMMSL---LIRMGIFEEDLARFYIA 736 (1034)
T ss_pred hhhhhhhhhhHhhcCCc-------------ceEEEEEEeccCCceEEEEeccCCccHHHH---HHHhccCHHHHHHHHHH
Confidence 34556666777776542 12234444433333 59999999866543 3445666777776532
Q ss_pred --HHHHHhhhccCCCC
Q 012848 442 --HALLKMLLVPYLNN 455 (455)
Q Consensus 442 --~aflkmlf~dgFv~ 455 (455)
.+-..-+-.-||+|
T Consensus 737 EltcAiesVHkmGFIH 752 (1034)
T KOG0608|consen 737 ELTCAIESVHKMGFIH 752 (1034)
T ss_pred HHHHHHHHHHhcccee
Confidence 13334444556665
No 414
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=22.44 E-value=67 Score=34.00 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=35.7
Q ss_pred cccccccCcceEEEeEecccCCCCCcCCeEEEEEeeC-----CCcccchHhHHHHHHHHH
Q 012848 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH-----PGVGESIRRDFVIINLAA 343 (455)
Q Consensus 289 ~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqr-----PgV~~~i~~DL~il~~la 343 (455)
-+|||.|+=|.|-.|+-+.+ |+.||||=.. +--.++.-+.+++|+.+-
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t-------~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~ 79 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRT-------GEKVAIKKILNPFENQIDAKRTLRELKLLRHLR 79 (359)
T ss_pred cccccCcceeeEEEEEEcCC-------CCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc
Confidence 58999999999999998763 6999999443 444455556666666554
No 415
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.41 E-value=91 Score=33.98 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=33.5
Q ss_pred ChHhhccccccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccc
Q 012848 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES 331 (455)
Q Consensus 279 ~~~eiF~~fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~ 331 (455)
++...|..+ +-|+-||.|-||||.-... ++.||+||..=+-.+-
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t-------~k~vAiKii~Le~~~d 53 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKT-------KKVVAIKIIDLEEAED 53 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccc-------cceEEEEEechhhcch
Confidence 455666666 5789999999999988652 5899999987554444
No 416
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=21.04 E-value=39 Score=33.83 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=17.4
Q ss_pred CCCCCeEEeecccCccccchhHH
Q 012848 403 LVHPAVLVETYEQGECVSRYVDE 425 (455)
Q Consensus 403 lst~rVLVmE~i~G~~i~~~~~~ 425 (455)
+...-.|.|||++|.++.+....
T Consensus 88 l~~~~flimeYv~G~~l~~~~~~ 110 (238)
T cd05124 88 LEKAYLLIMEYVPGITLFKMTTH 110 (238)
T ss_pred HhhhheeeeeecCCccchhhccc
Confidence 44455699999999999875443
No 417
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=20.67 E-value=95 Score=34.30 Aligned_cols=43 Identities=14% Similarity=0.090 Sum_probs=28.8
Q ss_pred cccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHH
Q 012848 291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342 (455)
Q Consensus 291 PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~l 342 (455)
-+|.|+-|-|++|+-+++ |+.||||=..--... ..|...||-+
T Consensus 17 klGDGTfGsV~la~~~~~-------~~~VAIK~MK~Kf~s--~ee~~nLREv 59 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKET-------GELVAIKKMKKKFYS--WEECMNLREV 59 (538)
T ss_pred HhcCCcceeEEEeeecCC-------CceeeHHHHHhhhcc--HHHHHHHHHH
Confidence 468899999999999873 688999954433332 3344444443
No 418
>PRK09902 hypothetical protein; Provisional
Probab=20.35 E-value=2.3e+02 Score=27.92 Aligned_cols=90 Identities=21% Similarity=0.180 Sum_probs=53.6
Q ss_pred cccccccccCcceEEEeEecccCCCCCcCCeEEEEEeeCCCcccchHhHHHHHHHHHHHHccccCccccCHHHHHHHHHH
Q 012848 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366 (455)
Q Consensus 287 fd~~PiASASIAQVHrA~Lk~~~~G~~~~G~~VAVKVqrPgV~~~i~~DL~il~~la~l~~~~P~l~~l~l~e~v~ef~~ 366 (455)
+|+-=-+=|....|++-.+. |+.+-||=|.-.+...+. .|. +-+
T Consensus 21 ve~pN~~rgG~SgV~r~~~~---------g~~~ylKrq~nhl~~s~r---------------~P~----g~p-------- 64 (216)
T PRK09902 21 VEEPNYRRNGMSGVQCVERN---------GKKLYVKRMTHHLFHSVR---------------YPF----GRP-------- 64 (216)
T ss_pred ecCCCcCCCCcceEEEEEeC---------CcEEEEEeccCccccccc---------------CCC----Cch--------
Confidence 44333334778888887763 467888876544332111 132 112
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhCCCCCeEeCcccCC------CCCCCeEEeecccCc-cccchh
Q 012848 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP------LVHPAVLVETYEQGE-CVSRYV 423 (455)
Q Consensus 367 ~l~~ELDfr~EA~nl~rf~~~f~~~~~V~vP~~~~~------lst~rVLVmE~i~G~-~i~~~~ 423 (455)
-|.+|-.++.++.+. .|.+|+|+.. ..-+.+||+|-++|. ++.+++
T Consensus 65 ------tf~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l 117 (216)
T PRK09902 65 ------TIVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWY 117 (216)
T ss_pred ------HHHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHH
Confidence 235677788887753 5668888832 123479999999986 555554
No 419
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=20.31 E-value=86 Score=24.09 Aligned_cols=43 Identities=21% Similarity=0.161 Sum_probs=26.4
Q ss_pred cccC-ccccchhHHhhhchhhHHHHHHHHHHHHHHhhhccCCCC
Q 012848 413 YEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVPYLNN 455 (455)
Q Consensus 413 ~i~G-~~i~~~~~~l~~~~~~~~~LA~~g~~aflkmlf~dgFv~ 455 (455)
.++| .++.++++.+........+-+..-+..|+.+|.+.|++.
T Consensus 25 ~~~g~~t~~ei~~~l~~~y~~~~~~~~~dv~~fl~~L~~~glIe 68 (68)
T PF05402_consen 25 LLDGPRTVEEIVDALAEEYDVDPEEAEEDVEEFLEQLREKGLIE 68 (68)
T ss_dssp H--SSS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT---
T ss_pred HccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCcCcC
Confidence 3444 567777766665555556666888899999999999873
No 420
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=20.24 E-value=2e+02 Score=26.86 Aligned_cols=41 Identities=22% Similarity=0.178 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHHhCCCCCeEeCcccCCCCCCCeEEeecccCccccc
Q 012848 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421 (455)
Q Consensus 373 Dfr~EA~nl~rf~~~f~~~~~V~vP~~~~~lst~rVLVmE~i~G~~i~~ 421 (455)
|-..|..+++...+. + .-|+++ .+.++-+++||++|.+++.
T Consensus 19 dr~~E~~~~~~l~~~--g----~~p~~~--~~~~~g~v~e~i~g~~l~~ 59 (211)
T PF01633_consen 19 DRENENEALKLLSEA--G----LGPKII--YFFENGRVEEFIEGRTLSP 59 (211)
T ss_dssp HHHHHHHHHHHHHHT--T----SSS-EE--EEETTEEEEE--SSEE--C
T ss_pred CHHHHHHHHHHHHHc--C----CCCeEE--EEcCCCcEEEEecccccCh
Confidence 446677777766642 1 146667 5678889999999999874
Done!