BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012856
(455 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 192 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV 251
FA R Y+EL ++ ++ L DV PD D + L M ++ G L + +
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLL-----DVFTPDETLDDFTDFYLVMPFM-GTDLGKLM 120
Query: 252 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 311
E G + + + LR + G H D PGNL + +L LDFG+ +
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 312 EARFAII 318
E ++
Sbjct: 181 EMXGXVV 187
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 310 PEEARFAIIG 319
P R A+ G
Sbjct: 162 PSSRRAALCG 171
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F ++RVY L Y G R +KL K +E
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKKVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 324
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 325 ---VNRDYEAMARDYYALDFL 342
VNR + D+++ L
Sbjct: 196 PEVVNRRGHTQSADWWSFGVL 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 324
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 325 ---VNRDYEAMARDYYALDFL 342
VNR + D+++ L
Sbjct: 195 PEVVNRRGHTQSADWWSFGVL 215
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 20 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 75
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 106
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 107 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 157
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 158 PSSRRTTLCG 167
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 324
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 325 ---VNRDYEAMARDYYALDFL 342
VNR + D+++ L
Sbjct: 195 PEVVNRRGHTQSADWWSFGVL 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRXXLCG 168
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 164 PSSRRXXLXG 173
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 162 PSSRRXXLCG 171
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 224 VPDIFWDYTSGKVL--TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYF 281
V D++ Y G L ME++EG L + V + + V + +L L G
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 282 HADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D ++L T +G++ DFG ++ +E
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 194
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRTXLCG 168
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 111
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 162
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRTTLCG 168
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSCHA 159
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 160 PSSRRTTLSG 169
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 78
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 109
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 110 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 161 PSSRRXXLCG 170
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N+L + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI 162
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRTELCG 168
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 134
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 135 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 179
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 192 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 246
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 247 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 303
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 304 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 333
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHTFCGTIEYMA 189
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 192 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 246
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 247 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 303
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 304 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 333
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHXFCGTIEYMA 189
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 324
+ L L G + D P N+L EG + DFG+ E E+ ++ G V +M
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 325 ---VNRDYEAMARDYYA 338
VNR + + D+++
Sbjct: 199 PEVVNRQGHSHSADWWS 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 160 PSSRRDTLCG 169
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 211 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 259
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 160 PSSRRTDLCG 169
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 38 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 93
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 124
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 125 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 176 PSSRRTTLCG 185
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 185 PSSRRTTLCG 194
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 164 PSSRRTDLCG 173
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 237 LTMEWVEGVKLNEQVAIESQG-LKVLDLVNTGIQC--SLRQLLEYGYFHADPHPGNLLAT 293
L ME++EG L+E IES G L V +N Q ++ + H D P N+L
Sbjct: 88 LVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 294 PEGKLAFLDFGM---MSETPEEARFAIIGHV 321
L DFG+ +SET ++G V
Sbjct: 146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 162 PSSRRDDLCG 171
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K I+A+KV E G++ L R V + + +++ L
Sbjct: 18 FGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 73
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 104
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 105 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 155
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 156 PSSRRTTLCG 165
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 313
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 313
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 192 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKL 247
FA R Y+EL ++ Q+ L DV P F+D+ L M +++ L
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLL-----DVFTPASSLRNFYDF----YLVMPFMQ-TDL 133
Query: 248 NEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 307
+ + +E K+ LV ++ L+ + G H D PGNL + +L LDFG+
Sbjct: 134 QKIMGMEFSEEKIQYLVYQMLK-GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-- 190
Query: 308 ETPEEARFAIIGHVVHMVNRDYEA 331
AR A ++V R Y A
Sbjct: 191 -----ARHADAEMTGYVVTRWYRA 209
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Glutamine
Length = 410
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 59 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 90
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 59 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 90
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 270 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
C ++ L G H D P N++ + L LDFG+
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 36/175 (20%)
Query: 133 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 192 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 250
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 251 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+ Q L+ LD ++ H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHANC-----------IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 87 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
D ++L T +G++ DFG ++ +E
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 36/175 (20%)
Query: 133 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 192 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 250
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 251 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+ Q L+ LD ++ H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHANC-----------IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 36/175 (20%)
Query: 133 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 192 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 250
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 251 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+ Q L+ LD ++ H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHANC-----------IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 91 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
D ++L T +G++ DFG ++ +E
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 173
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 185 PSSRRDDLCG 194
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 286
Y+ G++ + ME ++G L+ QV E++ + ++L V+ + L L E + H D
Sbjct: 84 YSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK 142
Query: 287 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 143 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 180
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 277 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY 336
++G H D P N+L G++ DFG I G +V +D A Y
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFG------------ISGRLVDDKAKDRSAGCAAY 190
Query: 337 YA------LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNV 390
A D PD D+ V +L + N KT + L VL + P +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 391 PAYYAL 396
P +
Sbjct: 251 PGHMGF 256
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 96 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIG 319
D ++L T +G++ DFG ++ +E R ++G
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 98 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIG 319
D ++L T +G++ DFG ++ +E R ++G
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 53/235 (22%)
Query: 133 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 192
G V A+ K+SG+ VAVK+ +D + L N+ V +
Sbjct: 59 GIVCLAREKHSGRQVAVKM----------MDLRKQQRRELLFNEVVIM------------ 96
Query: 193 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QV 251
R YQ N V+ K Y E++ V ++ G LT + V V+LNE Q+
Sbjct: 97 --RDYQHFNVVE-------MYKSYLVGEELWV---LMEFLQGGALT-DIVSQVRLNEEQI 143
Query: 252 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 311
A V + +L L G H D ++L T +G++ DFG ++ +
Sbjct: 144 AT----------VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Query: 312 EA--RFAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIVPALRNFFDDA 362
+ R ++G M E ++R YA +D S + V +V +F D+
Sbjct: 194 DVPKRKXLVGTPYWMAP---EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 259 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 305
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 259 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 305
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 268 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 322
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 161
Query: 323 HMVNRDYEAMARDYYALDFLSPDVD 347
V +D +A + Y A + ++P+++
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELN 186
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 194 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 249
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 310 PEE 312
EE
Sbjct: 182 DEE 184
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 236 VLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLAT 293
VL ME+V+G +L +++ ES L LD L I +R + + H D P N+L
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 294 PEG--KLAFLDFGM 305
++ +DFG+
Sbjct: 222 NRDAKQIKIIDFGL 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 132 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 191
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 192 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 249
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 310 PEEARFAIIG 319
P R + G
Sbjct: 163 PSSRRDTLCG 172
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 194 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 249
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 54 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 113
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 114 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 173
Query: 310 PEE 312
EE
Sbjct: 174 DEE 176
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 141 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIG 319
D ++L T +G++ DFG ++ +E R ++G
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 315
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 260 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 305
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 315
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 268 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 322
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG------------ISGYLV 188
Query: 323 HMVNRDYEAMARDYYALDFLSPDVD 347
V +D +A + Y A + ++P+++
Sbjct: 189 DDVAKDIDAGCKPYXAPERINPELN 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 263 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 309
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 272 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEA 331
L+ + G H D PGNL + +L LDFG+ AR A ++V R Y A
Sbjct: 139 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-------ARHADAEMTGYVVTRWYRA 191
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 315
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|3ILK|A Chain A, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
pdb|3ILK|B Chain B, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
Length = 244
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 182 TTDVVALIDEFASRVYQELNYVQEGQNARRFKKLY 216
TTD +A ++ R+YQ L ++Q R+ K+LY
Sbjct: 179 TTDQLAYFFDYTERIYQSLGFIQNQGVXRKLKRLY 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 263 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 309
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 106 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 159
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 194 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 249
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 250 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 310 PEE 312
EE
Sbjct: 182 DEE 184
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 223 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 282
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 218 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 283 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIG 319
D ++L T +G++ DFG ++ +E R ++G
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 77 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + +E +G +M
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYM 173
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 268 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 322
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 205
Query: 323 HMVNRDYEAMARDYYALDFLSPDVD 347
V + +A + Y A + ++P+++
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELN 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 93 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 189
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 267 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 309
GI L + GY H D P N+L EG+ +D G M++
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 101 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 220 EDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLL 276
E+++ + ++ T+ L M+ V G +L +++ +G+ K LV + +++ L
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 277 EYGYFHADPHPGNLL-ATPE--GKLAFLDFGM 305
E G H D P NLL TPE K+ DFG+
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 322
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 323 HMVNRDYEAMARDYYALDFL 342
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 268 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 322
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 323 HMVNRDYEAMARDYYALDFL 342
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 136 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 232
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 231 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 285
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 286 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 324
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 237 LTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYF----HADPHPGNLLA 292
+ ME+ +++ + + ++ L D + T +Q +L+ L EY +F H D GN+L
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTL-TEDEIATILQSTLKGL-EYLHFMRKIHRDIKAGNILL 158
Query: 293 TPEGKLAFLDFGMMSE 308
EG DFG+ +
Sbjct: 159 NTEGHAKLADFGVAGQ 174
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 313
+L + G+ H D P N+L G L DFG + +E
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 313
+L + G+ H D P N+L G L DFG + +E
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 313
+L + G+ H D P N+L G L DFG + +E
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 170 VGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF- 228
+GF+ + ++I+T + +Y E Y +EG + ++ + +D V +IF
Sbjct: 68 IGFITGHFCELISTVSKLVXXATIDELYIEKEYRREGVAEQLXXRIEQELKDYGVKEIFV 127
Query: 229 --WDYTSGKVLTMEWVEGVKLNEQV 251
WD+ G +E+ LNE +
Sbjct: 128 EVWDFNKG---ALEFYNKQGLNEHI 149
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCRHTDDE 178
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 271 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 308
+L L G H D P N+ P G+ DFG++ E
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
>pdb|1QSO|A Chain A, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|B Chain B, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|C Chain C, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|D Chain D, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
Length = 149
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 210 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN 265
+R K Y D +V PD D+ G+ L +K+ VA+ES K++ ++N
Sbjct: 16 QRLWKSYQDFYEVSFPDDLDDFNFGRFLD----PNIKMWAAVAVESSSEKIIGMIN 67
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 279 GYFHADPHPGNLLATPEGKLAFLDFGMMSE 308
GY H D P NLL KL +DFG+ ++
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLARHTDDE 180
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLARHTDDE 184
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 281 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 312
H D P NL + +L LDFG+ T +E
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,426,906
Number of Sequences: 62578
Number of extensions: 558368
Number of successful extensions: 1762
Number of sequences better than 100.0: 186
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 1674
Number of HSP's gapped (non-prelim): 203
length of query: 455
length of database: 14,973,337
effective HSP length: 102
effective length of query: 353
effective length of database: 8,590,381
effective search space: 3032404493
effective search space used: 3032404493
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)