Query 012857
Match_columns 455
No_of_seqs 141 out of 812
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 17:34:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.3E-23 8E-28 200.7 9.8 119 326-455 123-253 (294)
2 1z0n_A 5'-AMP-activated protei 99.9 2.9E-22 9.9E-27 166.2 10.0 81 361-455 8-89 (96)
3 2qlv_B Protein SIP2, protein S 99.9 6.5E-22 2.2E-26 189.6 11.3 84 362-455 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 3.6E-14 1.2E-18 149.6 8.5 79 361-452 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 4.4E-11 1.5E-15 124.7 8.7 68 363-443 16-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.2 2.5E-06 8.5E-11 74.2 8.1 61 361-429 6-75 (131)
7 3c8d_A Enterochelin esterase; 98.1 7.8E-06 2.7E-10 80.6 8.9 81 361-454 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 97.8 9.2E-06 3.1E-10 67.6 3.8 75 362-444 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.4 0.00043 1.5E-08 72.5 9.6 68 364-443 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.2 0.00051 1.7E-08 74.3 7.9 69 363-443 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.0 0.0011 3.8E-08 71.8 7.6 65 365-442 66-144 (755)
12 2laa_A Beta/alpha-amylase; SBD 95.8 0.021 7E-07 48.8 6.9 67 364-443 5-79 (104)
13 1cyg_A Cyclodextrin glucanotra 95.7 0.04 1.4E-06 58.2 10.1 74 362-444 578-667 (680)
14 1bf2_A Isoamylase; hydrolase, 95.5 0.014 4.7E-07 62.9 5.9 56 365-433 17-85 (750)
15 1qho_A Alpha-amylase; glycosid 95.4 0.032 1.1E-06 58.9 8.3 71 362-444 580-673 (686)
16 3bmv_A Cyclomaltodextrin gluca 95.3 0.037 1.3E-06 58.5 8.1 74 362-444 582-670 (683)
17 3vgf_A Malto-oligosyltrehalose 95.1 0.016 5.6E-07 59.9 4.9 61 365-441 10-73 (558)
18 2vn4_A Glucoamylase; hydrolase 95.0 0.044 1.5E-06 58.1 7.8 73 364-444 497-583 (599)
19 1d3c_A Cyclodextrin glycosyltr 95.0 0.051 1.7E-06 57.4 8.2 74 362-444 585-673 (686)
20 1wzl_A Alpha-amylase II; pullu 94.9 0.029 1E-06 58.0 6.0 61 362-430 21-87 (585)
21 2wsk_A Glycogen debranching en 94.9 0.036 1.2E-06 58.6 6.8 54 365-432 20-77 (657)
22 2bhu_A Maltooligosyltrehalose 94.6 0.035 1.2E-06 58.2 5.9 62 365-443 35-97 (602)
23 2vr5_A Glycogen operon protein 94.6 0.049 1.7E-06 58.4 7.0 55 365-433 30-91 (718)
24 1vem_A Beta-amylase; beta-alph 94.3 0.063 2.2E-06 56.0 6.7 73 361-444 417-506 (516)
25 1j0h_A Neopullulanase; beta-al 93.7 0.048 1.6E-06 56.5 4.6 62 361-430 20-89 (588)
26 2e8y_A AMYX protein, pullulana 93.2 0.12 4.3E-06 55.1 6.7 66 365-443 114-186 (718)
27 2fhf_A Pullulanase; multiple d 91.9 0.17 5.8E-06 57.3 6.0 67 365-443 305-385 (1083)
28 1gcy_A Glucan 1,4-alpha-maltot 91.3 0.037 1.3E-06 56.6 0.0 70 363-443 430-517 (527)
29 3m07_A Putative alpha amylase; 90.2 0.43 1.5E-05 50.5 6.8 62 365-443 43-107 (618)
30 3faw_A Reticulocyte binding pr 89.7 0.2 6.8E-06 55.5 3.9 65 366-442 146-224 (877)
31 4aio_A Limit dextrinase; hydro 89.6 0.35 1.2E-05 51.2 5.5 65 365-442 137-215 (884)
32 1ea9_C Cyclomaltodextrinase; h 89.5 0.075 2.6E-06 55.1 0.4 61 362-430 21-86 (583)
33 2ya0_A Putative alkaline amylo 89.5 0.48 1.7E-05 50.5 6.5 65 365-441 25-105 (714)
34 2wan_A Pullulanase; hydrolase, 89.4 0.48 1.6E-05 52.5 6.6 63 365-441 326-398 (921)
35 2wan_A Pullulanase; hydrolase, 88.9 0.45 1.5E-05 52.7 6.0 58 365-434 154-221 (921)
36 1ji1_A Alpha-amylase I; beta/a 83.5 0.64 2.2E-05 48.6 3.5 59 365-431 31-96 (637)
37 2ya1_A Putative alkaline amylo 80.8 1.5 5E-05 49.2 5.2 64 365-440 332-411 (1014)
38 4fch_A Outer membrane protein 79.4 1.2 4.3E-05 40.8 3.5 50 374-434 12-63 (221)
39 2c3v_A Alpha-amylase G-6; carb 76.2 5.6 0.00019 33.7 6.3 66 364-441 10-82 (102)
40 4fe9_A Outer membrane protein 58.6 8.7 0.0003 38.5 4.5 46 374-430 150-197 (470)
41 4dny_A Metalloprotease STCE; m 51.1 32 0.0011 30.4 6.3 25 414-439 98-123 (126)
42 2eef_A Protein phosphatase 1, 50.6 21 0.00071 32.2 5.2 73 364-441 48-133 (156)
43 2djm_A Glucoamylase A; beta sa 46.5 37 0.0013 28.8 5.9 68 365-438 22-99 (106)
44 4fe9_A Outer membrane protein 45.5 16 0.00055 36.6 4.1 53 374-437 260-319 (470)
45 3tqn_A Transcriptional regulat 35.3 31 0.0011 28.1 3.6 35 61-95 11-46 (113)
46 4ham_A LMO2241 protein; struct 34.9 31 0.0011 28.8 3.6 31 61-91 16-47 (134)
47 3qh9_A Liprin-beta-2; coiled-c 31.9 86 0.0029 26.0 5.6 39 298-336 26-64 (81)
48 4fem_A Outer membrane protein 31.0 29 0.00098 33.6 3.1 51 374-435 149-201 (358)
49 3mxz_A Tubulin-specific chaper 29.8 52 0.0018 28.4 4.2 65 297-361 32-105 (116)
50 3tnu_B Keratin, type II cytosk 27.3 1.1E+02 0.0037 26.1 5.8 64 296-359 34-97 (129)
51 3neu_A LIN1836 protein; struct 26.2 60 0.002 27.0 3.9 35 61-95 15-50 (125)
52 2eap_A Lymphocyte cytosolic pr 25.3 39 0.0013 28.5 2.5 33 76-108 7-39 (90)
53 3tnu_A Keratin, type I cytoske 25.1 92 0.0032 26.6 5.0 63 297-359 37-99 (131)
54 1mhx_A Immunoglobulin-binding 24.7 24 0.00081 27.8 1.0 14 429-442 48-61 (65)
55 1qsd_A Protein (beta-tubulin b 22.8 47 0.0016 28.1 2.6 65 295-359 26-95 (106)
56 4fch_A Outer membrane protein 22.1 47 0.0016 30.2 2.7 49 375-433 117-169 (221)
57 4egu_A Histidine triad (HIT) p 21.4 52 0.0018 26.8 2.5 34 77-111 44-77 (119)
58 1igd_A Protein G; immunoglobul 20.4 34 0.0011 27.0 1.1 13 429-441 44-56 (61)
59 1psb_C NDR Ser/Thr kinase-like 20.1 13 0.00044 24.0 -1.1 18 303-320 4-21 (26)
No 1
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=2.3e-23 Score=200.70 Aligned_cols=119 Identities=24% Similarity=0.364 Sum_probs=101.1
Q ss_pred HhHHHHHHHhhhhccccccccccchHH------HHHHHhh-c--CCceEEEEEEec-CCceEEEEeeeCCCccccccCCC
Q 012857 326 LALSVLQTKAVTEINKAEKLISDKDEE------LIAAEES-L--SGLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPL 395 (455)
Q Consensus 326 ~~La~l~~k~~~ei~~Aqkll~eK~~e------LdaAe~a-L--sgLv~VTFtW~g-~AkeV~VtGSFNNW~~~IpMkKd 395 (455)
.++|||-.+.++.+.+|-..+.++++- +..|... + -..++|+|+|++ +|++|+|+|+|++|+.+++|.++
T Consensus 123 vv~ayLm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~ 202 (294)
T 3nme_A 123 VALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG 202 (294)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc
Confidence 678899999899999999888887762 2222222 2 445899999999 58999999999999988999985
Q ss_pred CCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCCCCCee-cc-CCccceEEEeC
Q 012857 396 PSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 455 (455)
Q Consensus 396 ~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DPd~Ptv-tD-~GnvNNVL~Ve 455 (455)
...|.|++++.||||.|+|||+|||+|++||++|.+ .| .|++||||.|.
T Consensus 203 -----------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 -----------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp -----------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred -----------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 247999999999999999999999999999999987 56 79999999984
No 2
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.87 E-value=2.9e-22 Score=166.17 Aligned_cols=81 Identities=35% Similarity=0.602 Sum_probs=73.6
Q ss_pred CCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCCCCC
Q 012857 361 SGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRE 440 (455)
Q Consensus 361 sgLv~VTFtW~g~AkeV~VtGSFNNW~~~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DPd~P 440 (455)
...++|+|+|..+|++|+|+|+||+|+ .++|.+ ..|.|++++.|++|.|+|||+|||+|++||.+|
T Consensus 8 ~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~-------------~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~ 73 (96)
T 1z0n_A 8 AQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTR-------------SQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEP 73 (96)
T ss_dssp --CEEEEEEECSCCSCEEEEEGGGTTC-CEECEE-------------ETTEEEEEEEECSEEEEEEEEETTEEECCTTSC
T ss_pred CCceEEEEEECCCCcEEEEEEEeCCCc-cccCEE-------------CCCEEEEEEEccCCCEEEEEEECCeEEcCCCCC
Confidence 556899999998899999999999999 789986 357999999999999999999999999999999
Q ss_pred eecc-CCccceEEEeC
Q 012857 441 SVTK-GGICNNILRVI 455 (455)
Q Consensus 441 tvtD-~GnvNNVL~Ve 455 (455)
++.+ .|+.||+|.|.
T Consensus 74 ~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 74 IVTSQLGTVNNIIQVK 89 (96)
T ss_dssp EEECTTSCEEEEEEEC
T ss_pred eEECCCCCEeEEEEEc
Confidence 9887 79999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.86 E-value=6.5e-22 Score=189.65 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.3
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCCCCCe
Q 012857 362 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 441 (455)
Q Consensus 362 gLv~VTFtW~g~AkeV~VtGSFNNW~~~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DPd~Pt 441 (455)
.+++|+|+|+++|++|+|+|+|++|++.++|.+.. .+.|.|++++.|+||.|+|||+|||+|++||++|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 57899999999999999999999999888998742 35789999999999999999999999999999999
Q ss_pred ecc-CCccceEEEeC
Q 012857 442 VTK-GGICNNILRVI 455 (455)
Q Consensus 442 vtD-~GnvNNVL~Ve 455 (455)
+.| .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 987 79999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.48 E-value=3.6e-14 Score=149.64 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=67.4
Q ss_pred CCceEEEEEEec--CCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEee--e
Q 012857 361 SGLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--V 435 (455)
Q Consensus 361 sgLv~VTFtW~g--~AkeV~VtGSFNNW~~~-IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~--~ 435 (455)
.+.++|+|+++. +|++|+|+|+||+|++. .+|.+ .+|.|++++.||||.|+|||+|||+|. +
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~ 81 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVL 81 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCC
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecC
Confidence 456788998877 58999999999999763 67875 489999999999999999999999999 8
Q ss_pred CCCCCeec---c-CCccceEE
Q 012857 436 DPQRESVT---K-GGICNNIL 452 (455)
Q Consensus 436 DPd~Ptvt---D-~GnvNNVL 452 (455)
||++|... + .|..|+|.
T Consensus 82 d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 82 DPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CTTCCCEEEEECSSCTTSEEE
T ss_pred CCCCCcccccccCCcccccee
Confidence 88888754 3 68899885
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.16 E-value=4.4e-11 Score=124.68 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=60.3
Q ss_pred ceEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCCCCCe
Q 012857 363 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 441 (455)
Q Consensus 363 Lv~VTFtW~g~AkeV~VtGSFNNW~~~-IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DPd~Pt 441 (455)
...|.|.++..|+.|+|+|+||+|.+. .+|++ ..+.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 467888999989999999999999864 57764 4689999999999999999999999999999987
Q ss_pred ec
Q 012857 442 VT 443 (455)
Q Consensus 442 vt 443 (455)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.24 E-value=2.5e-06 Score=74.24 Aligned_cols=61 Identities=25% Similarity=0.569 Sum_probs=48.1
Q ss_pred CCceEEEEEEecC---CceEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE
Q 012857 361 SGLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV 429 (455)
Q Consensus 361 sgLv~VTFtW~g~---AkeV~VtGS---FNNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV 429 (455)
...+.|+|+.... ++.|+|+|+ +.+|++. ++|.... -+.....|++++.||+| .+||||+|
T Consensus 6 ~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 6 SGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 3457889988753 899999999 8999973 6887531 01257799999999998 59999999
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.08 E-value=7.8e-06 Score=80.57 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.1
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeeE-EE
Q 012857 361 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 425 (455)
Q Consensus 361 sgLv~VTFtW~g~-A-------keV~VtGSFNNW~~------~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~Y-EY 425 (455)
.+.+.|||.|.++ + ++|+|. +++|.. +.+|.|. .+.|+|+.++.|++|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 4568999999987 5 789998 334322 2468774 37899999999999999 99
Q ss_pred EEEEc------------------------CEeeeCCCCCeecc-C-CccceEEEe
Q 012857 426 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 454 (455)
Q Consensus 426 KFIVD------------------------GeW~~DPd~PtvtD-~-GnvNNVL~V 454 (455)
.|+|| |..+.||.+|.... . |...|+|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 77889999998764 3 777788875
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.84 E-value=9.2e-06 Score=67.59 Aligned_cols=75 Identities=27% Similarity=0.509 Sum_probs=55.2
Q ss_pred CceEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEEc--
Q 012857 362 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD-- 430 (455)
Q Consensus 362 gLv~VTFtW~g~---AkeV~VtGSF---NNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIVD-- 430 (455)
+.+.|+|..... |+.|+|+|+. .+|++. ++|.... .+.+.+.|++++.||+| .+||||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 456788877653 8999999986 599963 6887531 01145789999999998 599999993
Q ss_pred -C--EeeeCCCCCeecc
Q 012857 431 -G--QWKVDPQRESVTK 444 (455)
Q Consensus 431 -G--eW~~DPd~PtvtD 444 (455)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 3 4888887665554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.40 E-value=0.00043 Score=72.48 Aligned_cols=68 Identities=24% Similarity=0.382 Sum_probs=52.3
Q ss_pred eEEEEEE-ecCCceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---cCEe--ee
Q 012857 364 EVVEIQY-SGDGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 435 (455)
Q Consensus 364 v~VTFtW-~g~AkeV~VtGSFNNW~~-~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIV---DGeW--~~ 435 (455)
..|+|+. ...++.|.|.|+|++|.. .++|.+. ...|+|++++. +.+|.+ |+|.| ||.+ +.
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 5788954 445999999999999975 4789863 25789999997 778874 99999 6775 57
Q ss_pred CCCCCeec
Q 012857 436 DPQRESVT 443 (455)
Q Consensus 436 DPd~Ptvt 443 (455)
||......
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 87766544
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.22 E-value=0.00051 Score=74.34 Aligned_cols=69 Identities=26% Similarity=0.368 Sum_probs=52.4
Q ss_pred ceEEEEEE-ecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---cCEe--e
Q 012857 363 LEVVEIQY-SGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 434 (455)
Q Consensus 363 Lv~VTFtW-~g~AkeV~VtGSFNNW~~~-IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIV---DGeW--~ 434 (455)
..-|+|.. ...|+.|.|+|+||+|+.. .+|.+. ...|+|++.+. +.+|. .|||.| ||+| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 34688854 4559999999999999864 689763 25699999986 88885 588888 5664 6
Q ss_pred eCCCCCeec
Q 012857 435 VDPQRESVT 443 (455)
Q Consensus 435 ~DPd~Ptvt 443 (455)
.||-.....
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788876654
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=96.98 E-value=0.0011 Score=71.81 Aligned_cols=65 Identities=20% Similarity=0.427 Sum_probs=49.4
Q ss_pred EEEEE-EecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-------eCCeeEEEEEEEc---CE
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---GQ 432 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~~~-IpMkKd~ss~~~~~~~tkesGvFsitL~-------LPPG~YEYKFIVD---Ge 432 (455)
.|+|. |...|+.|.|+|+|++|... ++|.+. ..|+|++.+. +++|.+ |||.|+ |.
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~ 132 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGA 132 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCC
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCc
Confidence 58885 55569999999999999763 788763 5799999998 678875 888886 45
Q ss_pred e--eeCCCCCee
Q 012857 433 W--KVDPQRESV 442 (455)
Q Consensus 433 W--~~DPd~Ptv 442 (455)
| +.||-...+
T Consensus 133 ~~~~~dpya~~~ 144 (755)
T 3aml_A 133 WVDRIPAWIRYA 144 (755)
T ss_dssp CEEECCTTCSCE
T ss_pred EEecCCcchheE
Confidence 5 347755443
No 12
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.78 E-value=0.021 Score=48.76 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=51.6
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcE-EEEEEeCCe-eEEEEEEEcCE--eee
Q 012857 364 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLW-STVLWLYPG-TYEIKFIVDGQ--WKV 435 (455)
Q Consensus 364 v~VTFtW~g~AkeV~VtGSFN--NW~~~--IpMkKd~ss~~~~~~~tkesGvF-sitL~LPPG-~YEYKFIVDGe--W~~ 435 (455)
..|+|.|..+.+.|+|-..+. +|+.. ++|.+. .-++ | ..++.|+.| .++|+|. ||. |-.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-----------~~~g-w~~~TI~l~~g~~~~~~F~-dG~~~WDN 71 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-----------EISG-YAKITVDIGSASQLEAAFN-DGNNNWDS 71 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-----------TTTT-EEEEEEECTTCSCEEEEEE-CSSSCEES
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-----------cCCC-eEEEEEECCCCCEEEEEEe-CCCCcCcC
Confidence 578899988899999999984 89864 678653 1134 6 699999976 8999995 874 998
Q ss_pred CCCCCeec
Q 012857 436 DPQRESVT 443 (455)
Q Consensus 436 DPd~Ptvt 443 (455)
++......
T Consensus 72 n~g~Nyt~ 79 (104)
T 2laa_A 72 NNTKNYSF 79 (104)
T ss_dssp TTTSCEEE
T ss_pred CCCccEEe
Confidence 87766533
No 13
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.68 E-value=0.04 Score=58.20 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=54.2
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 012857 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 429 (455)
Q Consensus 362 gLv~VTFtW~g----~AkeV~VtGSFN---NW~~~--I-pMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV- 429 (455)
+.+.|+|+... .|+.|+|+|+-. +|++. + +|...- +.....|++++.||.| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 45788898865 389999999875 99974 5 665410 0256799999999988 79999997
Q ss_pred --cC--EeeeCCCCCeecc
Q 012857 430 --DG--QWKVDPQRESVTK 444 (455)
Q Consensus 430 --DG--eW~~DPd~PtvtD 444 (455)
+| .|-..++.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 34 4777766655554
No 14
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.49 E-value=0.014 Score=62.91 Aligned_cols=56 Identities=13% Similarity=0.174 Sum_probs=43.3
Q ss_pred EEEEE-EecCCceEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-eC------CeeEEEEEEEcC
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 431 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~~-----~IpMkKd~ss~~~~~~~tkesGvFsitL~-LP------PG~YEYKFIVDG 431 (455)
.|+|. |...|+.|.|.+ |++|.. .++|.+. ..|+|.+.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 37885 555599999998 987653 3678652 5699999986 66 899999999997
Q ss_pred Ee
Q 012857 432 QW 433 (455)
Q Consensus 432 eW 433 (455)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 53
No 15
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.43 E-value=0.032 Score=58.94 Aligned_cols=71 Identities=21% Similarity=0.388 Sum_probs=52.8
Q ss_pred CceEEEEEEec-----CCceEEEEeee---CCCcc--------cc-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eE
Q 012857 362 GLEVVEIQYSG-----DGEIVEVAGSF---NGWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TY 423 (455)
Q Consensus 362 gLv~VTFtW~g-----~AkeV~VtGSF---NNW~~--------~I-pMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~Y 423 (455)
..+.|+|+... .|+.|+|+|+- -+|++ .+ +|.. .....|++++.||+| .+
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~ 647 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTI 647 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeE
Confidence 35678887764 37899999998 48987 23 4542 256789999999998 59
Q ss_pred EEEEEE---cC--EeeeCCCCCeecc
Q 012857 424 EIKFIV---DG--QWKVDPQRESVTK 444 (455)
Q Consensus 424 EYKFIV---DG--eW~~DPd~PtvtD 444 (455)
||||+| +| .|...++.-....
T Consensus 648 eyKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 648 QFKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEEcCCCCEEeCCCCCeeEECC
Confidence 999998 24 4877777665554
No 16
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.26 E-value=0.037 Score=58.48 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=52.8
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 012857 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 429 (455)
Q Consensus 362 gLv~VTFtW~g----~AkeV~VtGSFN---NW~~~--I-pMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV- 429 (455)
..+.|+|+... .|+.|+|+|+-. +|++. + +|...- +.....|++++.||.| .+||||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 652 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKK 652 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35788898865 389999999885 99963 5 675410 0246799999999988 79999997
Q ss_pred cC---EeeeCCCCCeecc
Q 012857 430 DG---QWKVDPQRESVTK 444 (455)
Q Consensus 430 DG---eW~~DPd~PtvtD 444 (455)
|+ .|-..++.-...+
T Consensus 653 ~~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 653 NGNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSSCCEECCSSCEEEECC
T ss_pred cCCceEecCCCCeeEECC
Confidence 31 3666655444443
No 17
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.14 E-value=0.016 Score=59.89 Aligned_cols=61 Identities=13% Similarity=0.050 Sum_probs=49.2
Q ss_pred EEEEEEe-cCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEcCE-eeeCCCCCe
Q 012857 365 VVEIQYS-GDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 441 (455)
Q Consensus 365 ~VTFtW~-g~AkeV~VtGSFNNW~~~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVDGe-W~~DPd~Pt 441 (455)
.|+|+.. ..|+.|.|.|.|+ ..++|.+. ..|+|++.+. +.+|. .|+|.|||. ...||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 5788554 4599999999987 56899874 5799999996 88885 699999997 888987754
No 18
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.00 E-value=0.044 Score=58.11 Aligned_cols=73 Identities=26% Similarity=0.501 Sum_probs=52.4
Q ss_pred eEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-c--C
Q 012857 364 EVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D--G 431 (455)
Q Consensus 364 v~VTFtW~g~---AkeV~VtGSF---NNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV-D--G 431 (455)
+.|+|..... |+.|+|+|+- -+|++. ++|.... -+.....|++++.||+| .+||||+| | |
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 6788877653 8999999988 489863 6787531 01124689999999998 59999998 2 3
Q ss_pred --EeeeCCCCCeecc
Q 012857 432 --QWKVDPQRESVTK 444 (455)
Q Consensus 432 --eW~~DPd~PtvtD 444 (455)
.|-..|+.-...+
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3777766655444
No 19
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=94.97 E-value=0.051 Score=57.44 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=52.0
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 012857 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 429 (455)
Q Consensus 362 gLv~VTFtW~g----~AkeV~VtGSFN---NW~~~--I-pMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV- 429 (455)
..+.|+|+... .|+.|+|+|+-. +|++. + +|... .+.....|++++.||.| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~---------~~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQ---------VVYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCS---------SSSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccc---------cCCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 45788888865 389999999875 99974 5 56531 00246799999999988 79999997
Q ss_pred c-C--EeeeCCCCCeecc
Q 012857 430 D-G--QWKVDPQRESVTK 444 (455)
Q Consensus 430 D-G--eW~~DPd~PtvtD 444 (455)
| + .|-..++.-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 2 2 3666555444443
No 20
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=94.91 E-value=0.029 Score=58.04 Aligned_cols=61 Identities=13% Similarity=0.041 Sum_probs=44.2
Q ss_pred CceEEEEE-EecCCceEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEc
Q 012857 362 GLEVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 430 (455)
Q Consensus 362 gLv~VTFt-W~g~AkeV~V-tGSFNNW~~----~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVD 430 (455)
....++|+ |...++.|.| .|+|++|+. .++|.+... +...|+|++.+......+.|||.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 21 TQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGS--------DERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEE--------CSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeec--------CCCEEEEEEEEECCCCeEEEEEEEE
Confidence 34556663 5556999999 899999975 468986310 1124569999998877899999985
No 21
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=94.88 E-value=0.036 Score=58.61 Aligned_cols=54 Identities=26% Similarity=0.416 Sum_probs=42.4
Q ss_pred EEEEE-EecCCceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEcCE
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 432 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~--~~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVDGe 432 (455)
.|+|+ |...|+.|.|.+ |+++. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~------------~~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPG------------HSGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCE------------EETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcC------------CCCCEEEEEECCCCCCCE-EEEEEeee
Confidence 58885 555599999999 98765 3578975 25799999885 788887 99999983
No 22
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=94.65 E-value=0.035 Score=58.25 Aligned_cols=62 Identities=19% Similarity=0.240 Sum_probs=48.3
Q ss_pred EEEEE-EecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCCCCCeec
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 443 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~~~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DPd~Ptvt 443 (455)
.|+|+ |...++.|.|.|. + ..++|.+. ..|+|++.+.+.+|.+ |+|.|||..+.||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 57885 5555999999994 2 45889863 5789999999888986 9999999777788776543
No 23
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.61 E-value=0.049 Score=58.41 Aligned_cols=55 Identities=22% Similarity=0.398 Sum_probs=42.2
Q ss_pred EEEEE-EecCCceEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEcCEe
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 433 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~-----~~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVDGeW 433 (455)
.|+|. |...|+.|.|.+ |+.+. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~------------~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKN------------KTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECE------------ESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCcc------------CCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 57885 555599999999 87554 2467875 25799999885 788987 999999854
No 24
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.26 E-value=0.063 Score=56.03 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=51.8
Q ss_pred CCceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE
Q 012857 361 SGLEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV 429 (455)
Q Consensus 361 sgLv~VTFtW~g----~AkeV~VtGSFN---NW~~~---IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV 429 (455)
...+.|+|.... .|+.|+|+|+-. +|++. ++|... ..++.|++++.||.| ..||||+|
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEE
Confidence 335889998764 289999999884 89874 356431 234599999999988 59999998
Q ss_pred -c--C---EeeeCCCCCeecc
Q 012857 430 -D--G---QWKVDPQRESVTK 444 (455)
Q Consensus 430 -D--G---eW~~DPd~PtvtD 444 (455)
| | .|-..++.-...+
T Consensus 486 ~~~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 486 KSKDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp ECTTSCEEEECSSCEEESSCC
T ss_pred EeCCCCeeEEeCCCCEEEecC
Confidence 3 2 4666655544333
No 25
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=93.74 E-value=0.048 Score=56.52 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=44.9
Q ss_pred CCceEEEEE-EecCCceEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEc
Q 012857 361 SGLEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 430 (455)
Q Consensus 361 sgLv~VTFt-W~g~AkeV~V-tGSFNNW~~------~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVD 430 (455)
....+++|+ |...+++|.| .|+|++|+. .++|.+... +...|+|++.+......+.|+|.|.
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 20 SETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGS--------DELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEE--------CSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeec--------CCCeEEEEEEEECCCcEEEEEEEEE
Confidence 345677774 5566999999 799999964 478986410 0124579999988777889999885
No 26
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.16 E-value=0.12 Score=55.06 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=47.7
Q ss_pred EEEEE-EecCCceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEc--CEe--eeCC
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDP 437 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~~-~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVD--GeW--~~DP 437 (455)
.|+|+ |...++.|.|.|.|++|.. .++|.+. ..|+|.+.+. +.+|. .|+|.|+ |.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 57885 4445999999999998864 4789864 4689999887 45663 4666665 774 5688
Q ss_pred CCCeec
Q 012857 438 QRESVT 443 (455)
Q Consensus 438 d~Ptvt 443 (455)
......
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 776543
No 27
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=91.90 E-value=0.17 Score=57.33 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=49.2
Q ss_pred EEEEE-EecCCceEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEc------CE--
Q 012857 365 VVEIQ-YSGDGEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ-- 432 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtG-SFNNW~~-~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVD------Ge-- 432 (455)
.|+|. |...++.|.|.+ +|++|.. .++|.+. ...|+|++.+. +.+|.| |+|.|+ |.
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~ 372 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVE 372 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccc
Confidence 58886 445599999999 8899975 4788753 25689999884 788865 888885 43
Q ss_pred --eeeCCCCCeec
Q 012857 433 --WKVDPQRESVT 443 (455)
Q Consensus 433 --W~~DPd~Ptvt 443 (455)
...||......
T Consensus 373 ~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 373 QYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEECCTTCSCBC
T ss_pred cceecCCccceec
Confidence 46788776543
No 28
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=91.34 E-value=0.037 Score=56.59 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-c-
Q 012857 363 LEVVEIQY-SG---DGEIVEVAGSFN---GWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 430 (455)
Q Consensus 363 Lv~VTFtW-~g---~AkeV~VtGSFN---NW~~--~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIV-D- 430 (455)
.++|+|+. .. .|+.|+|+|+-. +|++ .++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 46778876 33 389999999885 8987 3678631 145689999999999 59999996 3
Q ss_pred -C-----EeeeCCCCCeec
Q 012857 431 -G-----QWKVDPQRESVT 443 (455)
Q Consensus 431 -G-----eW~~DPd~Ptvt 443 (455)
| .|-..|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 2 366655554433
No 29
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=90.25 E-value=0.43 Score=50.47 Aligned_cols=62 Identities=19% Similarity=0.248 Sum_probs=46.1
Q ss_pred EEEEEE-ecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEE-EeCCeeEEEEEEEc-CEeeeCCCCCe
Q 012857 365 VVEIQY-SGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVL-WLYPGTYEIKFIVD-GQWKVDPQRES 441 (455)
Q Consensus 365 ~VTFtW-~g~AkeV~VtGSFNNW~~~IpMkKd~ss~~~~~~~tkesGvFsitL-~LPPG~YEYKFIVD-GeW~~DPd~Pt 441 (455)
.|+|+. ...++.|.|.+ +|. .++|.+. ..|.|.+.+ .+.+|. .|+|.|+ |....||....
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 578854 45599999998 353 4789864 568999888 477886 5899995 56888998765
Q ss_pred ec
Q 012857 442 VT 443 (455)
Q Consensus 442 vt 443 (455)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 44
No 30
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=89.68 E-value=0.2 Score=55.54 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=47.8
Q ss_pred EEEEE-ecCCceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCee-----EEEEEEEc--CE-
Q 012857 366 VEIQY-SGDGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVD--GQ- 432 (455)
Q Consensus 366 VTFtW-~g~AkeV~VtG-SFNNW~~---~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~-----YEYKFIVD--Ge- 432 (455)
|.|+. ...|+.|.|.+ ++++|.. .++|.+. ..|+|.+.+.+.||. +.|+|.|+ |.
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 78865 45599999998 6778853 5789763 679999999776662 67888886 33
Q ss_pred -eeeCCCCCee
Q 012857 433 -WKVDPQRESV 442 (455)
Q Consensus 433 -W~~DPd~Ptv 442 (455)
...||....+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 5668887543
No 31
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=89.59 E-value=0.35 Score=51.24 Aligned_cols=65 Identities=15% Similarity=0.057 Sum_probs=44.2
Q ss_pred EEEEE-EecCCceEEEEeeeCCCcccc--ccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEcCE--------
Q 012857 365 VVEIQ-YSGDGEIVEVAGSFNGWHHRI--KMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-------- 432 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtGSFNNW~~~I--pMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIVDGe-------- 432 (455)
.|+|+ |...|+.|.|.+-+++|.... .|.+ ...|+|++.+. +.+|. .|+|.|+|.
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~------------~~~g~W~~~~~~~~~g~-~Y~y~v~~~~~~~~~~~ 203 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK------------ESNGVWSVTGPREWENR-YYLYEVDVYHPTKAQVL 203 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECE------------EETTEEEEEEEGGGTTC-EEEEEEEEEETTTTEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec------------CCCCEEEEEECCCCCCC-EEEEEEeCCCCCccccc
Confidence 58896 555599999999655665432 2332 36899999986 56775 488888752
Q ss_pred --eeeCCCCCee
Q 012857 433 --WKVDPQRESV 442 (455)
Q Consensus 433 --W~~DPd~Ptv 442 (455)
...||.....
T Consensus 204 ~~~~~DPya~~~ 215 (884)
T 4aio_A 204 KCLAGDPYARSL 215 (884)
T ss_dssp EEEECCTTCSEE
T ss_pred CccccCCCeeee
Confidence 3468766543
No 32
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=89.49 E-value=0.075 Score=55.09 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=43.1
Q ss_pred CceEEEEE-EecCCceEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEc
Q 012857 362 GLEVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 430 (455)
Q Consensus 362 gLv~VTFt-W~g~AkeV~V-tGSFNNW~~---~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVD 430 (455)
....++|+ |...+++|.| .|+|++|+. .++|.+... +...|+|++.+......+.|||.|.
T Consensus 21 ~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 21 TTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLAT--------DELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEE--------CSSCEEECCEECCTTSCEEECBCCE
T ss_pred CEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEec--------cCCeEEEEEEEECCCceEEEEEEEE
Confidence 34555563 5556999999 799999975 468986410 1124569999987777788888874
No 33
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=89.46 E-value=0.48 Score=50.55 Aligned_cols=65 Identities=20% Similarity=0.337 Sum_probs=46.5
Q ss_pred EEEEE-EecCCceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEe--CCe-----eEEEEEEEc--
Q 012857 365 VVEIQ-YSGDGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 430 (455)
Q Consensus 365 ~VTFt-W~g~AkeV~VtG-SFNNW~~---~IpMkKd~ss~~~~~~~tkesGvFsitL~L--PPG-----~YEYKFIVD-- 430 (455)
.|+|. |...|+.|.|.+ +|++|.. .++|.+. ..|+|.+.+.- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 37885 555599999999 8888864 4788763 56899998863 134 267888886
Q ss_pred CE--eeeCCCCCe
Q 012857 431 GQ--WKVDPQRES 441 (455)
Q Consensus 431 Ge--W~~DPd~Pt 441 (455)
|. -..||....
T Consensus 93 ~~~~~~~DPya~~ 105 (714)
T 2ya0_A 93 GKTVLALDPYAKS 105 (714)
T ss_dssp TEEEEECCTTCSE
T ss_pred CceEEecCCceee
Confidence 64 357887644
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.41 E-value=0.48 Score=52.46 Aligned_cols=63 Identities=16% Similarity=0.235 Sum_probs=45.0
Q ss_pred EEEEEEe-cCCceEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE--cCE--ee
Q 012857 365 VVEIQYS-GDGEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--WK 434 (455)
Q Consensus 365 ~VTFtW~-g~AkeV~VtGSFNNW~----~~IpMkKd~ss~~~~~~~tkesGvFsitL~-LPPG~YEYKFIV--DGe--W~ 434 (455)
.|+|+.. ..++.|.|.+ |++|. ..++|.+. ..|+|++.+. +.+|.+ |+|.| +|. ..
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~ 391 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTA 391 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEe
Confidence 5788554 4599999997 99994 34789763 4689999886 567753 67766 565 45
Q ss_pred eCCCCCe
Q 012857 435 VDPQRES 441 (455)
Q Consensus 435 ~DPd~Pt 441 (455)
.||....
T Consensus 392 ~DPya~~ 398 (921)
T 2wan_A 392 VDPYARA 398 (921)
T ss_dssp CCTTCSS
T ss_pred cCCccee
Confidence 6887654
No 35
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=88.93 E-value=0.45 Score=52.68 Aligned_cols=58 Identities=22% Similarity=0.358 Sum_probs=40.7
Q ss_pred EEEEEEecCCceEEEEeee-------CCCcccc---ccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEee
Q 012857 365 VVEIQYSGDGEIVEVAGSF-------NGWHHRI---KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 434 (455)
Q Consensus 365 ~VTFtW~g~AkeV~VtGSF-------NNW~~~I---pMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~ 434 (455)
+|..--...+..+.++|+| .+|.+.- -|.. ..+|.|+.+..||+|.|+||+.++|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~------------~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 154 PVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKK------------INPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEE------------EETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccchhhhccccccCCCCCCcceeec------------cCCcceeeeeccCCcceeEEEeecCccc
Confidence 3333333445678888876 4677642 1322 2478999999999999999999998884
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=83.54 E-value=0.64 Score=48.62 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=39.9
Q ss_pred EEEEE-E----ecCCceEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcC
Q 012857 365 VVEIQ-Y----SGDGEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 431 (455)
Q Consensus 365 ~VTFt-W----~g~AkeV~VtGSFNNW~~~IpMkK--d~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDG 431 (455)
.|+|+ | ...++.|.|.+.|++=...++|.+ .. .+...|+|++.+........|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~--------~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSND--------PTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEEC--------TTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeecc--------ccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 46674 4 234899999999874112478876 21 012457999999876566779999974
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=80.80 E-value=1.5 Score=49.24 Aligned_cols=64 Identities=19% Similarity=0.311 Sum_probs=45.0
Q ss_pred EEEEEE-ecCCceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeC--Ce-----eEEEEEEEc--
Q 012857 365 VVEIQY-SGDGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD-- 430 (455)
Q Consensus 365 ~VTFtW-~g~AkeV~VtG-SFNNW~~---~IpMkKd~ss~~~~~~~tkesGvFsitL~LP--PG-----~YEYKFIVD-- 430 (455)
.|.|.. ...|+.|.|.+ +|++|.. .++|.+. ..|+|.+.+.-. +| .+.|+|.|+
T Consensus 332 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~ 399 (1014)
T 2ya1_A 332 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 399 (1014)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeC
Confidence 378854 44599999999 8888864 4789763 578999988631 23 266888886
Q ss_pred CE--eeeCCCCC
Q 012857 431 GQ--WKVDPQRE 440 (455)
Q Consensus 431 Ge--W~~DPd~P 440 (455)
|. ...||...
T Consensus 400 ~~~~~~~DPYa~ 411 (1014)
T 2ya1_A 400 GKTVLALDPYAK 411 (1014)
T ss_dssp TEEEEECCTTCS
T ss_pred CeEEEecCccce
Confidence 54 45788654
No 38
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=79.42 E-value=1.2 Score=40.76 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=38.6
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEee
Q 012857 374 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 434 (455)
Q Consensus 374 AkeV~VtGSFNNW~~--~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~ 434 (455)
.+++||+|++++|.. ..+|.+.. ...|.|...+.|+-|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 678999999998863 35776542 3578999999998764 89999876553
No 39
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=76.23 E-value=5.6 Score=33.73 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=46.7
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEEcC--EeeeC
Q 012857 364 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 436 (455)
Q Consensus 364 v~VTFtW~g~AkeV~VtGSFN--NW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIVDG--eW~~D 436 (455)
..|++-|..+...|+|==.+. +|... ++|.+. ...|.|..+|.|+.+ .++|.| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 356777776688888876664 48753 789753 147788999999965 899999 565 59776
Q ss_pred CCCCe
Q 012857 437 PQRES 441 (455)
Q Consensus 437 Pd~Pt 441 (455)
.....
T Consensus 78 ~g~Ny 82 (102)
T 2c3v_A 78 QGRDY 82 (102)
T ss_dssp GGTCE
T ss_pred CCcce
Confidence 55543
No 40
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.56 E-value=8.7 Score=38.54 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.6
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEc
Q 012857 374 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 430 (455)
Q Consensus 374 AkeV~VtGSFNNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVD 430 (455)
....||+|++++|... .+|.+.. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999854 3455432 3678899998887666 7999964
No 41
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=51.08 E-value=32 Score=30.44 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=20.6
Q ss_pred EEEEeCCe-eEEEEEEEcCEeeeCCCC
Q 012857 414 TVLWLYPG-TYEIKFIVDGQWKVDPQR 439 (455)
Q Consensus 414 itL~LPPG-~YEYKFIVDGeW~~DPd~ 439 (455)
.++.|..| .|.|+| ++|.|+.+.+.
T Consensus 98 ~svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 98 RKVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred cEEEecCCCEEEEEE-cCCEEEEcccc
Confidence 34678889 899999 99999987654
No 42
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.57 E-value=21 Score=32.25 Aligned_cols=73 Identities=11% Similarity=0.222 Sum_probs=46.7
Q ss_pred eEEEEEEec--CCceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCC----e---eEEEEEEEcCE
Q 012857 364 EVVEIQYSG--DGEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP----G---TYEIKFIVDGQ 432 (455)
Q Consensus 364 v~VTFtW~g--~AkeV~VtGSFNNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPP----G---~YEYKFIVDGe 432 (455)
..-++.... -.+.|.|.=+|++|... +++...++ ..+......|...|.||+ + .+-.+|.|+|.
T Consensus 48 l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~-----~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 48 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKD-----TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp EEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCC-----SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred EEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccc-----cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 334444443 27999999999999875 34443211 011123557999999886 2 67889999996
Q ss_pred --eeeCCCCCe
Q 012857 433 --WKVDPQRES 441 (455)
Q Consensus 433 --W~~DPd~Pt 441 (455)
|-.+....+
T Consensus 123 eyWDNN~G~NY 133 (156)
T 2eef_A 123 TYWDSNRGKNY 133 (156)
T ss_dssp EEEESGGGSCC
T ss_pred EEecCCCCeeE
Confidence 766554443
No 43
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=46.54 E-value=37 Score=28.76 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=42.1
Q ss_pred EEEEEEecC--CceEEEEee--eCCCcc-cc--ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEEcCE--ee
Q 012857 365 VVEIQYSGD--GEIVEVAGS--FNGWHH-RI--KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WK 434 (455)
Q Consensus 365 ~VTFtW~g~--AkeV~VtGS--FNNW~~-~I--pMkKd~ss~~~~~~~tkesGvFsitL~LPPG-~YEYKFIVDGe--W~ 434 (455)
.-++.-..- .+.|.|.=+ |++|.. .. +....+ . .+...-..|...+.||+. .+-.+|.|+|. |-
T Consensus 22 ~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~-----~-~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWD 95 (106)
T 2djm_A 22 SGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSG-----P-ISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYD 95 (106)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEE-----E-CTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEE
T ss_pred EEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEec-----C-CCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEc
Confidence 334444432 578888777 999987 42 211110 0 112345589999999866 68889999996 65
Q ss_pred eCCC
Q 012857 435 VDPQ 438 (455)
Q Consensus 435 ~DPd 438 (455)
.+..
T Consensus 96 NN~g 99 (106)
T 2djm_A 96 NNNS 99 (106)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 4433
No 44
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.48 E-value=16 Score=36.57 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.4
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeeeCC
Q 012857 374 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 437 (455)
Q Consensus 374 AkeV~VtGSFNNW~~~-------IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~DP 437 (455)
...++|+|++++|.-. .+|.+. ....+.|.....+..| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 5689999999988532 123221 1357788888877644 589999998886543
No 45
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=35.31 E-value=31 Score=28.13 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=29.3
Q ss_pred chHHHHHHHHHHHhcCCCCCC-CCChHHHHHhchhh
Q 012857 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHGRDD 95 (455)
Q Consensus 61 ~~el~~d~~ef~s~~~lp~~~-vpsmkel~~hgr~d 95 (455)
-..+++.|++.+..-.||+|. +||.+||.++=.+-
T Consensus 11 ~~~i~~~i~~~I~~g~~~~G~~lPs~~~La~~~~vS 46 (113)
T 3tqn_A 11 YQQLRDKIVEAIIDGSYVEGEMIPSIRKISTEYQIN 46 (113)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCcCcCHHHHHHHHCcC
Confidence 357899999999999999985 89999999875443
No 46
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=34.89 E-value=31 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHHhcCCCCCC-CCChHHHHHh
Q 012857 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (455)
Q Consensus 61 ~~el~~d~~ef~s~~~lp~~~-vpsmkel~~h 91 (455)
-+.++..|++.+..-.||+|. +||.+||.++
T Consensus 16 Y~QI~~~i~~~I~~G~l~pG~~LPser~La~~ 47 (134)
T 4ham_A 16 YEQIVQKIKEQVVKGVLQEGEKILSIREFASR 47 (134)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 367889999999999999996 9999999875
No 47
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=31.95 E-value=86 Score=25.97 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=29.4
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 012857 298 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAV 336 (455)
Q Consensus 298 ~e~~~l~~ml~qkele~~r~k~qie~~K~~La~l~~k~~ 336 (455)
-||++|++=+.--|-|-.|-...+--||+.|+.||...+
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe 64 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVA 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 488888887766666666667788889999988776544
No 48
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=30.99 E-value=29 Score=33.61 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=37.1
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEeee
Q 012857 374 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKV 435 (455)
Q Consensus 374 AkeV~VtGSFNNW~~--~IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW~~ 435 (455)
...+||+|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||+-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 578999999986643 34665432 367899999999766 6799988765543
No 49
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=29.82 E-value=52 Score=28.40 Aligned_cols=65 Identities=8% Similarity=0.175 Sum_probs=52.7
Q ss_pred hhhhHHHHHhhh--HHHHHHHHHHHHHHHHHHhHHHHHHHhhhhccccccccccc-------hHHHHHHHhhcC
Q 012857 297 QLEIDHLKFMLH--QKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDK-------DEELIAAEESLS 361 (455)
Q Consensus 297 ~~e~~~l~~ml~--qkele~~r~k~qie~~K~~La~l~~k~~~ei~~Aqkll~eK-------~~eLdaAe~aLs 361 (455)
+-+-+++..|-. -.+-++.+..+-+.++++++.-++.+...++.+-+.+|.+- ..++.+|+..+.
T Consensus 32 ~~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~ 105 (116)
T 3mxz_A 32 EREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Confidence 345566677765 37889999999999999999999999999999999988842 348888888753
No 50
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=27.27 E-value=1.1e+02 Score=26.07 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=49.4
Q ss_pred chhhhHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhccccccccccchHHHHHHHhh
Q 012857 296 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 359 (455)
Q Consensus 296 n~~e~~~l~~ml~qkele~~r~k~qie~~K~~La~l~~k~~~ei~~Aqkll~eK~~eLdaAe~a 359 (455)
...||.+++-.+..-+.|+.-++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 97 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQD 97 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4567888888888777777777777666667788888888888888888888877777666554
No 51
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=26.24 E-value=60 Score=26.97 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=28.9
Q ss_pred chHHHHHHHHHHHhcCCCCC-CCCChHHHHHhchhh
Q 012857 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRDD 95 (455)
Q Consensus 61 ~~el~~d~~ef~s~~~lp~~-~vpsmkel~~hgr~d 95 (455)
-..++..|++.+..-.+|+| .+||.+||.++=.+-
T Consensus 15 ~~~i~~~i~~~I~~g~~~~g~~Lps~~~La~~~~vS 50 (125)
T 3neu_A 15 YSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAVN 50 (125)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCCCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHCcC
Confidence 46789999999999999887 589999999875443
No 52
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.28 E-value=39 Score=28.48 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=29.6
Q ss_pred CCCCCCCCChHHHHHhchhhHHHHHHhhhHHHH
Q 012857 76 GLSESHVPSMKELSAHGRDDLANIVRRRGYKFI 108 (455)
Q Consensus 76 ~lp~~~vpsmkel~~hgr~dlan~vrrrgyk~i 108 (455)
|..=..||+|+|-..=...|+|.-.|+.||+=+
T Consensus 7 ~m~~~~~ps~seV~~Wsp~~VadWLkk~g~~~c 39 (90)
T 2eap_A 7 GMALRNVPFRSEVLGWDPDSLADYFKKLNYKDC 39 (90)
T ss_dssp CSSTTCCCCHHHHTTCCTTTHHHHHHHTTCHHH
T ss_pred cccccccccCccccccCHHHHHHHHHHcCCchH
Confidence 566678999999999999999999999999663
No 53
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=25.15 E-value=92 Score=26.62 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=42.9
Q ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhccccccccccchHHHHHHHhh
Q 012857 297 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 359 (455)
Q Consensus 297 ~~e~~~l~~ml~qkele~~r~k~qie~~K~~La~l~~k~~~ei~~Aqkll~eK~~eLdaAe~a 359 (455)
..||.+++..+..-+.|+..++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777777777777666666555556677777777888888888888777777666544
No 54
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=24.74 E-value=24 Score=27.85 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.4
Q ss_pred EcCEeeeCCCCCee
Q 012857 429 VDGQWKVDPQRESV 442 (455)
Q Consensus 429 VDGeW~~DPd~Ptv 442 (455)
|||+|.+|+.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 68999999987654
No 55
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=22.78 E-value=47 Score=28.15 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=48.6
Q ss_pred cchhhhHHHHHhhhH---HHHHHHHHHHHHHHHHHhHHHHHHHhhhhccccccccccch--HHHHHHHhh
Q 012857 295 ENQLEIDHLKFMLHQ---KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD--EELIAAEES 359 (455)
Q Consensus 295 ~n~~e~~~l~~ml~q---kele~~r~k~qie~~K~~La~l~~k~~~ei~~Aqkll~eK~--~eLdaAe~a 359 (455)
|=+-+-+++..|-.. .+-++.+..+-+.+++.++.-++.+...++.+-+.+|.+.. .++.+|++.
T Consensus 26 E~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l~~~~~~ee~~~Ake~ 95 (106)
T 1qsd_A 26 ELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSA 95 (106)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 334456677777665 68899999999999999999999999999988888885322 245555544
No 56
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=22.09 E-value=47 Score=30.20 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=33.5
Q ss_pred ceEEEEeee--CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEcCEe
Q 012857 375 EIVEVAGSF--NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 433 (455)
Q Consensus 375 keV~VtGSF--NNW~~~--IpMkKd~ss~~~~~~~tkesGvFsitL~LPPG~YEYKFIVDGeW 433 (455)
..|+|+|+- ++|... .+|... ...++.|.....|..|...++|-++..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~----------~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVP----------ATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCC----------SSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeec----------cCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 459999984 688754 345431 1467789888899999877666555444
No 57
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=21.36 E-value=52 Score=26.77 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=29.1
Q ss_pred CCCCCCCChHHHHHhchhhHHHHHHhhhHHHHHHH
Q 012857 77 LSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQL 111 (455)
Q Consensus 77 lp~~~vpsmkel~~hgr~dlan~vrrrgyk~i~~l 111 (455)
+|--|++++.+|...-+.+||.+++ ..-++.+.+
T Consensus 44 iPk~H~~~l~dL~~~e~~~l~~~~~-~~~~~~~~~ 77 (119)
T 4egu_A 44 VPKKHYDSLIDIPDKEMDIVSHIHV-VINKIAKEK 77 (119)
T ss_dssp EESSCCSSGGGSCGGGTHHHHHHHH-HHHHHHHHH
T ss_pred EechhhCCHhHCCHhHHHHHHHHHH-HHHHHHHHh
Confidence 4778999999999998999999997 677777765
No 58
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=20.36 E-value=34 Score=26.98 Aligned_cols=13 Identities=38% Similarity=0.838 Sum_probs=10.4
Q ss_pred EcCEeeeCCCCCe
Q 012857 429 VDGQWKVDPQRES 441 (455)
Q Consensus 429 VDGeW~~DPd~Pt 441 (455)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999987655
No 59
>1psb_C NDR Ser/Thr kinase-like protein; helix-loop-helix, protein-peptide complex, metal binding protein; NMR {Bos taurus}
Probab=20.09 E-value=13 Score=23.99 Aligned_cols=18 Identities=33% Similarity=0.331 Sum_probs=14.9
Q ss_pred HHHhhhHHHHHHHHHHHH
Q 012857 303 LKFMLHQKEMELSRLKEQ 320 (455)
Q Consensus 303 l~~ml~qkele~~r~k~q 320 (455)
+...+++||.+++|++++
T Consensus 4 ~~~~~~~kEte~lRl~R~ 21 (26)
T 1psb_C 4 RRSAHARKETEFLRLKRT 21 (26)
T ss_dssp SCCCSCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 456788999999999975
Done!