Query 012861
Match_columns 455
No_of_seqs 195 out of 1306
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 07:04:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012861.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012861hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2E-116 4E-121 876.8 39.4 420 22-454 22-452 (454)
2 PLN02209 serine carboxypeptida 100.0 4E-102 9E-107 783.5 41.4 409 18-452 13-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 5E-101 1E-105 775.7 40.7 400 25-452 18-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 6E-100 1E-104 777.7 31.7 397 34-449 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.9E-94 6.2E-99 735.7 38.0 388 38-453 42-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 2E-72 4.4E-77 551.5 30.5 311 115-452 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.2E-68 1.4E-72 522.0 20.2 370 57-449 86-490 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.3E-67 9.4E-72 482.0 16.5 392 43-448 3-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.4 5.3E-11 1.1E-15 113.9 20.0 129 44-208 3-132 (288)
10 TIGR03056 bchO_mg_che_rel puta 99.3 6.6E-11 1.4E-15 113.4 17.9 108 69-209 25-132 (278)
11 TIGR03611 RutD pyrimidine util 99.3 5.5E-11 1.2E-15 112.1 16.7 116 59-209 2-117 (257)
12 PLN02824 hydrolase, alpha/beta 99.3 2E-10 4.4E-15 111.8 18.6 124 46-207 11-137 (294)
13 PHA02857 monoglyceride lipase; 99.3 3.5E-10 7.6E-15 108.9 19.8 125 54-209 9-134 (276)
14 PRK00870 haloalkane dehalogena 99.3 5.9E-10 1.3E-14 109.0 21.6 139 26-206 7-149 (302)
15 PRK03204 haloalkane dehalogena 99.3 5.4E-10 1.2E-14 108.5 19.9 122 44-207 15-136 (286)
16 PRK10673 acyl-CoA esterase; Pr 99.3 1.6E-10 3.5E-15 109.6 15.6 104 67-205 11-114 (255)
17 PLN02298 hydrolase, alpha/beta 99.2 1.9E-09 4.2E-14 106.7 20.6 140 42-209 31-171 (330)
18 TIGR03343 biphenyl_bphD 2-hydr 99.2 3.1E-09 6.7E-14 102.4 21.3 106 71-206 29-135 (282)
19 PLN02679 hydrolase, alpha/beta 99.2 4.3E-09 9.4E-14 105.6 22.6 104 71-207 87-191 (360)
20 PRK03592 haloalkane dehalogena 99.2 1.4E-09 3.1E-14 105.8 17.8 115 55-209 16-130 (295)
21 PLN02385 hydrolase; alpha/beta 99.1 6.1E-09 1.3E-13 104.1 20.2 128 54-208 70-198 (349)
22 TIGR02240 PHA_depoly_arom poly 99.1 3.2E-09 7E-14 102.3 17.0 118 54-208 10-127 (276)
23 TIGR02427 protocat_pcaD 3-oxoa 99.1 7.3E-09 1.6E-13 96.6 18.0 103 70-206 11-113 (251)
24 PLN03084 alpha/beta hydrolase 99.1 1.2E-08 2.6E-13 102.7 20.2 129 40-207 101-232 (383)
25 PF12697 Abhydrolase_6: Alpha/ 99.1 4.7E-10 1E-14 102.8 8.3 103 75-209 1-103 (228)
26 PRK14875 acetoin dehydrogenase 99.0 1.3E-08 2.7E-13 102.4 17.9 103 70-206 129-231 (371)
27 PLN02578 hydrolase 99.0 2.5E-08 5.3E-13 99.9 19.4 112 55-206 75-186 (354)
28 KOG4409 Predicted hydrolase/ac 99.0 1.9E-08 4.1E-13 96.5 17.3 137 40-210 62-198 (365)
29 PRK10349 carboxylesterase BioH 99.0 1E-08 2.3E-13 97.5 14.9 95 73-206 14-108 (256)
30 PLN02894 hydrolase, alpha/beta 99.0 8E-08 1.7E-12 97.8 21.5 109 70-207 103-211 (402)
31 PRK06489 hypothetical protein; 99.0 1.7E-07 3.7E-12 94.1 23.2 143 40-206 38-188 (360)
32 TIGR01249 pro_imino_pep_1 prol 99.0 1.9E-07 4.2E-12 91.5 22.9 126 45-209 6-132 (306)
33 PRK10749 lysophospholipase L2; 99.0 6.9E-08 1.5E-12 95.8 19.9 125 54-208 39-167 (330)
34 PLN02965 Probable pheophorbida 98.9 2.4E-08 5.1E-13 95.2 15.6 100 75-207 6-107 (255)
35 TIGR01738 bioH putative pimelo 98.9 1.6E-08 3.5E-13 94.1 13.0 97 72-207 4-100 (245)
36 PLN02652 hydrolase; alpha/beta 98.9 1.3E-07 2.9E-12 95.7 20.4 126 55-208 120-246 (395)
37 PRK11126 2-succinyl-6-hydroxy- 98.9 2.4E-08 5.3E-13 93.9 13.8 100 72-206 2-101 (242)
38 PLN03087 BODYGUARD 1 domain co 98.9 5.9E-07 1.3E-11 92.7 24.6 141 34-206 167-308 (481)
39 TIGR03695 menH_SHCHC 2-succiny 98.8 5.3E-08 1.1E-12 90.5 13.5 105 72-207 1-105 (251)
40 KOG4178 Soluble epoxide hydrol 98.8 2.1E-07 4.5E-12 89.1 17.3 123 41-205 20-146 (322)
41 PRK08775 homoserine O-acetyltr 98.8 4E-07 8.7E-12 90.8 18.0 76 114-208 98-174 (343)
42 TIGR01607 PST-A Plasmodium sub 98.7 2.7E-06 6E-11 84.4 20.9 149 54-209 6-187 (332)
43 PRK07581 hypothetical protein; 98.7 2.1E-06 4.6E-11 85.4 19.4 60 360-448 274-334 (339)
44 PLN02980 2-oxoglutarate decarb 98.6 2.3E-06 5.1E-11 100.9 21.9 108 68-206 1367-1479(1655)
45 COG1506 DAP2 Dipeptidyl aminop 98.6 5.2E-07 1.1E-11 96.9 13.9 133 54-209 374-509 (620)
46 PRK00175 metX homoserine O-ace 98.5 2.1E-05 4.6E-10 79.5 22.1 65 361-450 309-374 (379)
47 PLN02511 hydrolase 98.5 4.2E-06 9E-11 84.9 16.3 135 45-208 73-211 (388)
48 PF10340 DUF2424: Protein of u 98.4 7.1E-07 1.5E-11 88.0 8.4 132 57-210 105-238 (374)
49 PF00561 Abhydrolase_1: alpha/ 98.4 7.3E-07 1.6E-11 82.4 7.2 75 117-207 2-79 (230)
50 KOG1454 Predicted hydrolase/ac 98.4 1.1E-05 2.3E-10 79.7 15.1 60 361-449 264-323 (326)
51 COG2267 PldB Lysophospholipase 98.3 1E-05 2.2E-10 78.9 14.2 136 42-210 8-145 (298)
52 TIGR01392 homoserO_Ac_trn homo 98.3 0.00022 4.7E-09 71.4 23.4 64 360-448 287-351 (351)
53 TIGR03100 hydr1_PEP hydrolase, 98.2 0.00013 2.8E-09 70.3 19.4 79 115-208 57-135 (274)
54 PRK05855 short chain dehydroge 98.2 4.4E-05 9.5E-10 81.4 17.2 100 55-185 12-112 (582)
55 PRK10985 putative hydrolase; P 98.1 0.0004 8.6E-09 68.7 20.0 134 47-209 35-170 (324)
56 PLN02872 triacylglycerol lipas 98.0 4.3E-05 9.4E-10 77.3 11.3 139 26-182 20-175 (395)
57 KOG1455 Lysophospholipase [Lip 98.0 0.00054 1.2E-08 65.1 16.7 129 54-207 36-164 (313)
58 PF00326 Peptidase_S9: Prolyl 98.0 0.00023 5.1E-09 65.6 14.3 93 113-212 12-104 (213)
59 PLN02211 methyl indole-3-aceta 97.8 6.3E-05 1.4E-09 72.5 8.6 107 70-207 16-122 (273)
60 COG3509 LpqC Poly(3-hydroxybut 97.8 0.00039 8.5E-09 65.8 13.1 187 2-228 3-202 (312)
61 PRK06765 homoserine O-acetyltr 97.8 0.0047 1E-07 62.6 21.5 65 360-449 322-387 (389)
62 TIGR03101 hydr2_PEP hydrolase, 97.8 0.00022 4.8E-09 68.2 10.8 125 55-211 9-138 (266)
63 PRK05077 frsA fermentation/res 97.8 0.00018 3.9E-09 73.5 10.9 130 47-208 170-301 (414)
64 TIGR01840 esterase_phb esteras 97.6 0.00024 5.1E-09 65.7 8.3 111 69-207 10-130 (212)
65 KOG2564 Predicted acetyltransf 97.5 0.00022 4.8E-09 66.7 6.7 108 70-204 72-179 (343)
66 PRK11071 esterase YqiA; Provis 97.4 0.002 4.3E-08 58.5 10.9 55 360-448 135-189 (190)
67 TIGR02821 fghA_ester_D S-formy 97.3 0.0021 4.5E-08 62.0 11.4 41 164-209 135-175 (275)
68 PRK10566 esterase; Provisional 97.3 0.0014 3.1E-08 61.8 9.2 111 58-187 13-127 (249)
69 cd00707 Pancreat_lipase_like P 97.2 0.00076 1.7E-08 65.0 6.2 110 70-206 34-146 (275)
70 COG0596 MhpC Predicted hydrola 97.1 0.0039 8.4E-08 57.3 10.0 105 72-209 21-125 (282)
71 KOG1515 Arylacetamide deacetyl 97.0 0.0068 1.5E-07 59.7 11.2 138 53-211 69-211 (336)
72 TIGR03230 lipo_lipase lipoprot 97.0 0.0032 7E-08 64.2 8.8 81 115-206 73-153 (442)
73 PLN02442 S-formylglutathione h 96.9 0.0029 6.3E-08 61.3 8.0 55 148-210 127-181 (283)
74 TIGR01836 PHA_synth_III_C poly 96.9 0.075 1.6E-06 53.0 18.3 81 115-210 94-174 (350)
75 TIGR01838 PHA_synth_I poly(R)- 96.8 0.13 2.9E-06 54.0 19.3 86 115-210 220-305 (532)
76 PLN00021 chlorophyllase 96.7 0.0065 1.4E-07 59.7 8.7 116 69-209 49-168 (313)
77 PF03583 LIP: Secretory lipase 96.7 0.07 1.5E-06 51.8 15.7 68 361-454 219-289 (290)
78 PRK10115 protease 2; Provision 96.7 0.0085 1.9E-07 65.3 10.2 138 53-212 424-564 (686)
79 PRK10162 acetyl esterase; Prov 96.5 0.0088 1.9E-07 59.0 8.2 85 115-209 112-197 (318)
80 PRK13604 luxD acyl transferase 96.5 0.17 3.6E-06 49.3 16.7 125 54-209 18-143 (307)
81 TIGR00976 /NonD putative hydro 96.5 0.014 3E-07 62.1 10.2 129 54-209 5-134 (550)
82 PF10503 Esterase_phd: Esteras 96.4 0.015 3.3E-07 53.8 8.1 40 163-207 93-132 (220)
83 KOG2100 Dipeptidyl aminopeptid 96.3 0.014 3.1E-07 64.0 9.0 136 56-210 508-647 (755)
84 PF07519 Tannase: Tannase and 96.2 0.23 5E-06 51.6 17.0 86 351-453 343-430 (474)
85 PF00975 Thioesterase: Thioest 96.1 0.025 5.4E-07 52.5 8.5 102 74-207 2-104 (229)
86 KOG2382 Predicted alpha/beta h 95.8 0.58 1.3E-05 45.4 16.1 89 65-178 45-134 (315)
87 PF12695 Abhydrolase_5: Alpha/ 95.6 0.017 3.7E-07 49.1 4.4 93 74-206 1-94 (145)
88 PF06500 DUF1100: Alpha/beta h 95.4 0.053 1.2E-06 54.6 7.7 82 114-209 217-298 (411)
89 PF08386 Abhydrolase_4: TAP-li 95.3 0.06 1.3E-06 43.6 6.5 65 361-454 34-98 (103)
90 PF03096 Ndr: Ndr family; Int 95.3 0.19 4E-06 48.1 10.6 93 112-221 52-144 (283)
91 PF10230 DUF2305: Uncharacteri 95.2 0.14 3.1E-06 49.0 9.8 118 72-208 2-123 (266)
92 KOG4391 Predicted alpha/beta h 94.9 0.11 2.3E-06 47.3 7.5 126 48-209 57-186 (300)
93 PRK11460 putative hydrolase; P 94.6 0.19 4E-06 47.1 8.8 51 150-206 87-137 (232)
94 COG3208 GrsT Predicted thioest 94.2 4.4 9.6E-05 37.8 16.4 59 361-448 176-234 (244)
95 KOG1838 Alpha/beta hydrolase [ 94.1 0.52 1.1E-05 47.3 10.9 119 58-206 107-235 (409)
96 cd00312 Esterase_lipase Estera 93.6 0.25 5.4E-06 51.7 8.4 55 150-208 160-214 (493)
97 KOG2183 Prolylcarboxypeptidase 93.6 2.4 5.2E-05 42.5 14.1 93 72-184 81-184 (492)
98 COG4099 Predicted peptidase [G 93.5 1.1 2.3E-05 43.0 11.2 53 151-208 253-305 (387)
99 KOG2931 Differentiation-relate 92.8 2.8 6E-05 40.2 12.9 94 112-222 75-168 (326)
100 COG0657 Aes Esterase/lipase [L 92.4 1.4 3E-05 43.0 11.2 127 61-211 68-195 (312)
101 PRK05371 x-prolyl-dipeptidyl a 91.8 0.45 9.8E-06 52.6 7.5 85 113-209 277-375 (767)
102 PF01764 Lipase_3: Lipase (cla 91.7 0.55 1.2E-05 39.7 6.5 58 147-207 47-106 (140)
103 PRK11460 putative hydrolase; P 91.5 0.4 8.6E-06 44.9 5.8 63 360-447 147-209 (232)
104 cd00741 Lipase Lipase. Lipase 91.0 0.75 1.6E-05 39.8 6.7 58 146-206 10-67 (153)
105 TIGR03502 lipase_Pla1_cef extr 90.9 0.79 1.7E-05 50.3 8.1 98 71-186 448-574 (792)
106 PF07859 Abhydrolase_3: alpha/ 90.9 0.64 1.4E-05 42.3 6.6 45 164-209 68-112 (211)
107 PLN02454 triacylglycerol lipas 90.6 0.82 1.8E-05 46.2 7.3 64 145-209 207-273 (414)
108 cd00519 Lipase_3 Lipase (class 90.5 0.75 1.6E-05 42.8 6.7 58 148-208 112-169 (229)
109 PRK10566 esterase; Provisional 90.3 0.61 1.3E-05 43.7 6.0 62 361-449 186-247 (249)
110 PRK10252 entF enterobactin syn 89.9 2 4.2E-05 50.7 11.0 103 72-206 1068-1170(1296)
111 PF02230 Abhydrolase_2: Phosph 89.8 0.91 2E-05 41.8 6.6 57 147-210 87-143 (216)
112 PF05728 UPF0227: Uncharacteri 89.2 0.74 1.6E-05 41.6 5.3 40 166-213 58-97 (187)
113 PF05577 Peptidase_S28: Serine 89.0 3.1 6.7E-05 42.8 10.4 96 115-218 59-159 (434)
114 PF02129 Peptidase_S15: X-Pro 88.9 0.63 1.4E-05 44.6 4.9 85 114-211 56-140 (272)
115 PLN02211 methyl indole-3-aceta 88.5 0.95 2.1E-05 43.4 5.9 59 361-449 211-269 (273)
116 PRK10439 enterobactin/ferric e 88.4 2.4 5.3E-05 43.3 9.0 36 167-207 288-323 (411)
117 smart00824 PKS_TE Thioesterase 88.0 3.3 7.2E-05 36.9 8.9 77 114-205 24-100 (212)
118 KOG1552 Predicted alpha/beta h 87.8 3.5 7.6E-05 38.8 8.7 107 70-209 58-165 (258)
119 PF02230 Abhydrolase_2: Phosph 87.3 1.1 2.3E-05 41.3 5.2 59 361-448 155-213 (216)
120 PF03283 PAE: Pectinacetyleste 87.0 5.5 0.00012 39.9 10.4 139 56-202 35-192 (361)
121 COG0400 Predicted esterase [Ge 85.8 2 4.3E-05 39.5 6.0 60 360-449 145-204 (207)
122 KOG2281 Dipeptidyl aminopeptid 85.7 1.2 2.6E-05 46.9 5.0 113 70-211 640-766 (867)
123 PF06342 DUF1057: Alpha/beta h 85.4 7.6 0.00017 37.2 9.7 103 69-206 32-136 (297)
124 PF05990 DUF900: Alpha/beta hy 84.9 2.1 4.6E-05 40.1 6.0 60 147-209 76-139 (233)
125 PLN02571 triacylglycerol lipas 84.1 3.3 7.2E-05 42.0 7.2 63 145-208 205-276 (413)
126 COG2272 PnbA Carboxylesterase 84.0 3.8 8.2E-05 42.2 7.6 33 151-184 165-197 (491)
127 PF05677 DUF818: Chlamydia CHL 84.0 3.3 7.1E-05 40.7 6.8 93 67-182 132-230 (365)
128 COG3319 Thioesterase domains o 83.6 8.3 0.00018 36.7 9.3 103 73-207 1-103 (257)
129 PF00151 Lipase: Lipase; Inte 83.5 0.34 7.4E-06 47.9 -0.1 105 69-190 68-173 (331)
130 COG0596 MhpC Predicted hydrola 83.4 3.1 6.7E-05 37.6 6.4 62 358-447 218-279 (282)
131 COG0400 Predicted esterase [Ge 83.3 5.6 0.00012 36.5 7.8 60 145-210 78-137 (207)
132 PLN02733 phosphatidylcholine-s 82.7 2.7 5.9E-05 43.3 6.1 41 144-187 142-182 (440)
133 PF11288 DUF3089: Protein of u 82.7 2.3 5E-05 38.9 5.0 43 146-190 76-118 (207)
134 PF12695 Abhydrolase_5: Alpha/ 82.6 2.3 4.9E-05 35.7 4.8 46 357-430 100-145 (145)
135 KOG3975 Uncharacterized conser 82.2 2.1 4.6E-05 40.0 4.5 39 142-185 90-128 (301)
136 PF07819 PGAP1: PGAP1-like pro 80.2 16 0.00035 34.0 9.8 123 71-211 3-128 (225)
137 PF05448 AXE1: Acetyl xylan es 80.1 4.2 9.1E-05 40.1 6.2 46 156-207 164-209 (320)
138 KOG4627 Kynurenine formamidase 77.8 1.8 3.9E-05 39.3 2.5 73 126-209 102-174 (270)
139 COG2945 Predicted hydrolase of 76.4 3.8 8.3E-05 36.9 4.1 76 118-208 63-138 (210)
140 COG0429 Predicted hydrolase of 76.3 33 0.00071 33.8 10.7 127 47-206 53-185 (345)
141 COG4757 Predicted alpha/beta h 75.9 6.3 0.00014 36.6 5.5 64 114-181 56-119 (281)
142 PF12146 Hydrolase_4: Putative 75.7 11 0.00023 28.7 6.1 78 56-155 2-79 (79)
143 PF11144 DUF2920: Protein of u 75.2 5.4 0.00012 40.2 5.3 64 143-211 159-223 (403)
144 PLN02310 triacylglycerol lipas 74.0 8 0.00017 39.2 6.2 62 146-207 187-249 (405)
145 KOG1552 Predicted alpha/beta h 73.7 4.6 9.9E-05 38.0 4.1 60 361-449 192-251 (258)
146 PLN02753 triacylglycerol lipas 73.7 9.5 0.00021 39.8 6.8 65 143-207 286-359 (531)
147 PLN02719 triacylglycerol lipas 73.1 9.3 0.0002 39.7 6.6 63 145-207 274-345 (518)
148 KOG2984 Predicted hydrolase [G 71.7 7.6 0.00017 35.3 4.9 106 54-190 29-137 (277)
149 PLN02408 phospholipase A1 70.4 13 0.00028 37.1 6.8 46 145-191 179-224 (365)
150 PLN02802 triacylglycerol lipas 70.2 11 0.00024 39.2 6.3 61 146-207 310-371 (509)
151 PLN02847 triacylglycerol lipas 70.1 11 0.00024 39.9 6.4 57 150-209 237-294 (633)
152 KOG2182 Hydrolytic enzymes of 70.0 21 0.00046 36.9 8.2 70 142-216 147-216 (514)
153 PRK05077 frsA fermentation/res 69.5 9.9 0.00021 38.9 6.0 57 361-449 355-411 (414)
154 PLN02324 triacylglycerol lipas 69.3 15 0.00032 37.4 6.9 46 145-191 194-239 (415)
155 PLN00413 triacylglycerol lipas 68.4 6.5 0.00014 40.5 4.2 39 149-190 269-307 (479)
156 PF08237 PE-PPE: PE-PPE domain 67.8 25 0.00054 32.7 7.7 60 142-206 28-89 (225)
157 PLN02761 lipase class 3 family 67.6 16 0.00035 38.1 6.9 46 145-190 269-317 (527)
158 PRK04940 hypothetical protein; 67.5 8.4 0.00018 34.5 4.3 39 167-213 60-98 (180)
159 PF08840 BAAT_C: BAAT / Acyl-C 67.5 10 0.00022 34.9 5.1 45 156-206 11-55 (213)
160 PRK14567 triosephosphate isome 67.4 15 0.00033 34.7 6.2 61 144-210 178-238 (253)
161 PLN03037 lipase class 3 family 66.4 14 0.00031 38.4 6.3 44 148-191 298-342 (525)
162 PRK14566 triosephosphate isome 66.0 16 0.00034 34.8 6.0 59 145-209 189-247 (260)
163 PF06057 VirJ: Bacterial virul 65.6 12 0.00026 33.8 4.9 62 142-207 46-107 (192)
164 PF11187 DUF2974: Protein of u 64.4 17 0.00037 33.8 6.0 50 151-205 72-121 (224)
165 COG0627 Predicted esterase [Ge 64.1 20 0.00044 35.2 6.6 128 71-210 52-190 (316)
166 KOG3724 Negative regulator of 62.7 94 0.002 34.3 11.5 41 143-183 152-198 (973)
167 PLN02934 triacylglycerol lipas 62.0 11 0.00024 39.1 4.5 39 149-190 306-344 (515)
168 COG2819 Predicted hydrolase of 61.8 74 0.0016 30.3 9.6 53 148-206 114-171 (264)
169 KOG4569 Predicted lipase [Lipi 61.6 18 0.0004 35.8 5.9 55 149-206 156-212 (336)
170 PLN02162 triacylglycerol lipas 61.4 12 0.00025 38.6 4.5 39 149-190 263-301 (475)
171 PF08840 BAAT_C: BAAT / Acyl-C 60.6 5.9 0.00013 36.5 2.2 49 360-431 114-163 (213)
172 KOG2565 Predicted hydrolases o 59.4 23 0.00049 35.4 5.9 128 57-210 135-267 (469)
173 PF05057 DUF676: Putative seri 57.6 19 0.00042 33.1 5.1 48 144-192 56-103 (217)
174 PF07172 GRP: Glycine rich pro 56.7 10 0.00022 30.1 2.5 16 1-16 1-16 (95)
175 PF12740 Chlorophyllase2: Chlo 56.6 22 0.00048 33.8 5.2 63 143-207 63-131 (259)
176 PF06821 Ser_hydrolase: Serine 56.4 21 0.00046 31.6 4.9 42 362-433 115-156 (171)
177 KOG3079 Uridylate kinase/adeny 56.4 6.3 0.00014 35.2 1.4 17 70-86 5-21 (195)
178 KOG2551 Phospholipase/carboxyh 55.6 24 0.00053 32.5 5.1 57 361-447 163-221 (230)
179 PLN02442 S-formylglutathione h 54.0 41 0.00089 32.3 6.9 49 359-432 215-264 (283)
180 PF05049 IIGP: Interferon-indu 53.5 8.4 0.00018 38.7 2.0 57 70-128 32-97 (376)
181 PF10081 Abhydrolase_9: Alpha/ 52.6 22 0.00047 34.1 4.4 37 144-180 86-122 (289)
182 PF00756 Esterase: Putative es 52.2 11 0.00024 35.1 2.5 45 160-210 109-153 (251)
183 PRK07868 acyl-CoA synthetase; 50.9 34 0.00073 39.4 6.6 113 70-209 65-179 (994)
184 KOG2369 Lecithin:cholesterol a 50.8 20 0.00043 36.8 4.1 44 147-190 161-205 (473)
185 KOG3101 Esterase D [General fu 49.7 66 0.0014 29.6 6.8 41 166-211 140-180 (283)
186 cd00311 TIM Triosephosphate is 49.6 47 0.001 31.3 6.2 57 146-209 177-234 (242)
187 PF06821 Ser_hydrolase: Serine 49.1 28 0.00061 30.8 4.5 39 166-208 54-92 (171)
188 PF03403 PAF-AH_p_II: Platelet 48.8 12 0.00026 37.8 2.3 38 168-211 229-266 (379)
189 PRK07868 acyl-CoA synthetase; 48.7 23 0.00049 40.8 4.8 61 360-449 296-360 (994)
190 PF06259 Abhydrolase_8: Alpha/ 48.3 33 0.00071 30.7 4.7 114 64-187 10-129 (177)
191 PF02450 LCAT: Lecithin:choles 47.9 23 0.00049 35.9 4.2 43 166-209 118-163 (389)
192 KOG1516 Carboxylesterase and r 47.6 1.3E+02 0.0029 31.7 10.1 34 151-185 180-213 (545)
193 PLN02429 triosephosphate isome 47.3 48 0.001 32.5 6.0 58 146-209 240-298 (315)
194 COG3571 Predicted hydrolase of 46.7 29 0.00064 30.4 3.9 35 163-202 85-119 (213)
195 PF03959 FSH1: Serine hydrolas 46.1 11 0.00024 34.5 1.5 49 361-438 161-209 (212)
196 COG4782 Uncharacterized protei 45.3 41 0.0009 33.4 5.2 45 166-210 190-237 (377)
197 PF01738 DLH: Dienelactone hyd 44.7 84 0.0018 28.5 7.2 64 359-447 143-211 (218)
198 PLN02561 triosephosphate isome 44.5 52 0.0011 31.2 5.7 58 146-209 181-239 (253)
199 PF03959 FSH1: Serine hydrolas 43.6 33 0.00072 31.3 4.2 124 71-211 3-149 (212)
200 PF04446 Thg1: tRNAHis guanyly 43.2 29 0.00063 29.5 3.4 51 118-175 23-73 (135)
201 PF09292 Neil1-DNA_bind: Endon 42.3 16 0.00034 23.3 1.2 12 72-83 24-35 (39)
202 PF08194 DIM: DIM protein; In 42.1 28 0.00061 22.1 2.3 20 5-24 2-21 (36)
203 PF01083 Cutinase: Cutinase; 41.6 62 0.0013 28.8 5.5 81 117-209 41-125 (179)
204 COG1073 Hydrolases of the alph 40.7 52 0.0011 30.8 5.3 61 362-449 233-296 (299)
205 PRK10299 PhoPQ regulatory prot 40.4 22 0.00048 23.9 1.8 28 1-28 1-31 (47)
206 KOG1553 Predicted alpha/beta h 40.4 71 0.0015 31.6 5.9 103 71-206 242-344 (517)
207 COG3545 Predicted esterase of 39.8 36 0.00079 30.2 3.6 36 166-206 58-93 (181)
208 PRK00042 tpiA triosephosphate 39.8 85 0.0018 29.7 6.3 58 146-210 181-239 (250)
209 PF08538 DUF1749: Protein of u 39.4 65 0.0014 31.4 5.6 68 145-212 85-153 (303)
210 PRK14565 triosephosphate isome 37.9 69 0.0015 30.0 5.4 53 144-210 173-225 (237)
211 PF00681 Plectin: Plectin repe 37.6 26 0.00055 23.4 1.8 33 204-236 11-43 (45)
212 PTZ00333 triosephosphate isome 37.3 76 0.0016 30.1 5.6 59 145-209 183-242 (255)
213 PF05576 Peptidase_S37: PS-10 33.8 2.1E+02 0.0045 29.3 8.1 88 70-181 61-148 (448)
214 PLN02517 phosphatidylcholine-s 33.7 30 0.00065 36.8 2.4 23 166-188 212-234 (642)
215 COG4425 Predicted membrane pro 33.3 59 0.0013 33.3 4.3 36 144-179 374-409 (588)
216 PF05984 Cytomega_UL20A: Cytom 32.3 57 0.0012 24.9 3.0 17 3-19 1-17 (100)
217 KOG3043 Predicted hydrolase re 31.6 97 0.0021 28.8 5.0 76 357-448 160-238 (242)
218 KOG4667 Predicted esterase [Li 31.1 41 0.00088 31.1 2.5 137 117-263 64-200 (269)
219 TIGR01840 esterase_phb esteras 30.7 73 0.0016 28.8 4.3 32 362-393 169-200 (212)
220 TIGR03712 acc_sec_asp2 accesso 30.2 2E+02 0.0043 30.0 7.5 114 57-210 277-393 (511)
221 COG3150 Predicted esterase [Ge 30.1 67 0.0015 28.5 3.6 58 142-214 41-98 (191)
222 PRK06762 hypothetical protein; 29.6 31 0.00068 29.9 1.6 16 73-88 2-17 (166)
223 PRK13962 bifunctional phosphog 29.3 1.1E+02 0.0023 33.4 5.7 60 144-210 574-635 (645)
224 PF15613 WHIM2: WSTF, HB1, Itc 28.9 1.1E+02 0.0024 19.8 3.5 27 57-83 12-38 (38)
225 PRK01904 hypothetical protein; 28.5 1.8E+02 0.004 26.8 6.5 80 1-81 1-90 (219)
226 PRK05371 x-prolyl-dipeptidyl a 28.4 1.6E+02 0.0035 32.9 7.1 29 360-388 454-482 (767)
227 PF15253 STIL_N: SCL-interrupt 28.1 64 0.0014 32.7 3.6 35 43-80 200-235 (410)
228 COG2945 Predicted hydrolase of 27.7 56 0.0012 29.6 2.8 58 359-447 147-204 (210)
229 PF00135 COesterase: Carboxyle 26.5 54 0.0012 34.3 3.0 51 151-205 193-243 (535)
230 PF10503 Esterase_phd: Esteras 26.4 87 0.0019 29.0 4.0 28 361-388 169-196 (220)
231 PF10609 ParA: ParA/MinD ATPas 26.2 42 0.00091 25.8 1.5 12 117-128 2-13 (81)
232 PF07849 DUF1641: Protein of u 25.5 34 0.00074 22.6 0.8 16 309-324 16-31 (42)
233 COG3596 Predicted GTPase [Gene 25.4 90 0.002 30.0 3.8 60 70-130 36-100 (296)
234 PRK15492 triosephosphate isome 24.6 2.1E+02 0.0044 27.3 6.2 58 146-210 190-248 (260)
235 cd03871 M14_CPB Peptidase M14 24.1 1.3E+02 0.0027 29.4 4.8 30 148-179 10-39 (300)
236 PF06309 Torsin: Torsin; Inte 24.1 64 0.0014 27.1 2.4 20 69-88 49-68 (127)
237 PF01583 APS_kinase: Adenylyls 23.5 46 0.001 29.0 1.5 16 72-87 1-16 (156)
238 TIGR00419 tim triosephosphate 22.0 1.9E+02 0.004 26.5 5.2 53 146-209 152-204 (205)
239 COG0218 Predicted GTPase [Gene 22.0 1E+02 0.0022 28.0 3.4 46 82-131 35-84 (200)
240 PF01555 N6_N4_Mtase: DNA meth 21.9 91 0.002 28.1 3.3 59 117-179 2-63 (231)
241 PRK10115 protease 2; Provision 21.6 2.5E+02 0.0054 30.9 7.0 28 361-388 605-633 (686)
242 KOG2237 Predicted serine prote 21.3 7.3E+02 0.016 27.0 9.8 40 166-210 548-587 (712)
243 PF10142 PhoPQ_related: PhoPQ- 21.0 3.3E+02 0.0072 27.4 7.1 93 308-454 235-328 (367)
244 COG1647 Esterase/lipase [Gener 20.8 2.2E+02 0.0048 26.5 5.3 61 361-448 181-242 (243)
245 PF07389 DUF1500: Protein of u 20.6 81 0.0017 24.4 2.0 27 149-177 8-34 (100)
246 PF06028 DUF915: Alpha/beta hy 20.5 1.2E+02 0.0026 28.8 3.8 66 359-450 182-255 (255)
247 PF05277 DUF726: Protein of un 20.5 2.7E+02 0.0058 27.8 6.3 43 165-207 218-261 (345)
248 PRK10949 protease 4; Provision 20.4 60 0.0013 35.1 1.9 68 116-203 115-185 (618)
249 PF05436 MF_alpha_N: Mating fa 20.4 1.6E+02 0.0034 22.9 3.6 18 38-55 32-49 (86)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-116 Score=876.76 Aligned_cols=420 Identities=46% Similarity=0.872 Sum_probs=372.1
Q ss_pred ccCCCCCceecCCCCC-CCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCcc
Q 012861 22 KSVPQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKP 100 (455)
Q Consensus 22 ~~~~~~~~v~~lp~~~-~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~ 100 (455)
.+.+.+++|+.|||++ +++|++|||||+|++..+++|||||+||+++|++|||||||||||||||+. |+|.|+|||++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v 100 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRV 100 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEE
Confidence 4777889999999998 689999999999998889999999999999999999999999999999998 99999999999
Q ss_pred C--CCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeecccc
Q 012861 101 S--GDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAG 178 (455)
Q Consensus 101 ~--~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG 178 (455)
+ +.+|..|+|||||.||||||||||||||||+++..++.+ +|+.+|+|++.||++||++||||++|||||+||||||
T Consensus 101 ~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 101 KYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred cCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 7 458999999999999999999999999999998888765 8999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhcc---c--CCceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHHHHhh-cCCC
Q 012861 179 HYVPQLAQLIIQSNM---K--LNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYA-SGSL 252 (455)
Q Consensus 179 ~yvP~lA~~i~~~n~---~--inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~-~~~~ 252 (455)
||||+||++|++.|+ . |||||++||||++|+..|..++.+|+|+||+|++++++.+++.|+.... .+. ....
T Consensus 180 ~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~--~~~~~~~~ 257 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSD--NYANVDPS 257 (454)
T ss_pred eehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcc--cccccCCc
Confidence 999999999999985 2 9999999999999999999999999999999999999999999986422 111 1123
Q ss_pred chhHHHHHHHHHHHhcccCccccccCCCCcchhhhhhhcccccccccccCcccchhhhhccCcHHHHHHhccCccCcccc
Q 012861 253 TAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTSW 332 (455)
Q Consensus 253 ~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~yLN~~~Vr~aLhv~~~~~~~w 332 (455)
+..|.++++.....+...++.|++..+.|....... .........++|.++..++|||+++||+||||+....+.|
T Consensus 258 ~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~----~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W 333 (454)
T KOG1282|consen 258 NTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYEL----KKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKW 333 (454)
T ss_pred hhHHHHHHHHHHHHHhccCchhhhcchhhccccccc----cccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcc
Confidence 668999998887555557889998888897511000 0011234568898776699999999999999987533379
Q ss_pred eeecccccccccCCCCChHHHHHHHHhcC-ceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecC-Ceeee
Q 012861 333 TVCSEVLKYDMQNLEIPTIHVLGKLAKSG-IRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEG-RQAAG 410 (455)
Q Consensus 333 ~~cs~~v~~~~~d~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~-~~v~G 410 (455)
+.||+.+.....+...++++.+..++.++ +|||||+||.|++||+.||++|++ +++++...+|+||+.+ +|+||
T Consensus 334 ~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~----~L~~~~~~~~~pW~~~~~qvaG 409 (454)
T KOG1282|consen 334 ERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIK----SLNLSITDEWRPWYHKGGQVAG 409 (454)
T ss_pred cccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHH----hccCccccCccCCccCCCceee
Confidence 99999997666677788999999999865 999999999999999999999999 4558888999999985 89999
Q ss_pred EEEEeCCeeEEEEEcCCccccccCCcHHHHHHHHHHHcCCCCCC
Q 012861 411 WTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKPLPG 454 (455)
Q Consensus 411 ~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~~~ 454 (455)
|+|+|++ |||++|+|||||||.|||++|++||++||.|++++.
T Consensus 410 ~~~~Y~~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 410 YTKTYGG-LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred eEEEecC-EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCC
Confidence 9999999 999999999999999999999999999999999875
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.3e-102 Score=783.48 Aligned_cols=409 Identities=28% Similarity=0.594 Sum_probs=339.0
Q ss_pred HHhhccCCCCCceecCCCCC-CCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCC
Q 012861 18 ILTAKSVPQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHG 96 (455)
Q Consensus 18 ~~~~~~~~~~~~v~~lp~~~-~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~G 96 (455)
++.+.+++..++|++|||++ ++++++||||++|+++.+++||||||||+.+|+++||+|||||||||||+. |+|.|+|
T Consensus 13 ~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~G 91 (437)
T PLN02209 13 LVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENG 91 (437)
T ss_pred HHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcC
Confidence 44455666788999999985 789999999999987777899999999999999999999999999999997 9999999
Q ss_pred CCccCC-------CcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcE
Q 012861 97 PFKPSG-------DTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREF 169 (455)
Q Consensus 97 P~~~~~-------~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~ 169 (455)
||+++. .++++|++||++.|||||||||+||||||+++...+. +++++|++++.||+.||++||+|+++|+
T Consensus 92 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~ 169 (437)
T PLN02209 92 PLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPF 169 (437)
T ss_pred CceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCE
Confidence 999972 2799999999999999999999999999987654443 4556679999999999999999999999
Q ss_pred EEEeeccccccHHHHHHHHHHhcc-----cCCceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHH
Q 012861 170 FITGESYAGHYVPQLAQLIIQSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIR 244 (455)
Q Consensus 170 yi~GESYgG~yvP~lA~~i~~~n~-----~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~ 244 (455)
||+||||||||||.+|.+|+++|+ +||||||+|||||+||..|..++.+|+|.||+|++++++.+++.|.....
T Consensus 170 yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~- 248 (437)
T PLN02209 170 YVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYF- 248 (437)
T ss_pred EEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccc-
Confidence 999999999999999999999874 39999999999999999999999999999999999999999999863100
Q ss_pred HHhhcCCCchhHHHHHHHHHHHhcccCccccccCCCCcchhhhhhhcccccccccccCcccc---hhhhhccCcHHHHHH
Q 012861 245 RQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKA 321 (455)
Q Consensus 245 ~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~yLN~~~Vr~a 321 (455)
...+....|.+++++.... ...++.|++....|..... ......|.. ..++.|||+++||+|
T Consensus 249 ---~~~~~~~~C~~~i~~~~~~-~~~~~~~~~~~~~c~~~~~-----------~~~~~~c~~~~~~~~~~ylN~~~V~~a 313 (437)
T PLN02209 249 ---SVDPSNKKCLKLVEEYHKC-TDNINSHHTLIANCDDSNT-----------QHISPDCYYYPYHLVECWANNESVREA 313 (437)
T ss_pred ---cCCCChHHHHHHHHHHHHH-hhcCCcccccccccccccc-----------ccCCCCcccccHHHHHHHhCCHHHHHH
Confidence 0112356798777664332 2456777655555643210 011234532 347899999999999
Q ss_pred hccCccCcccceeecccccccccCCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccce
Q 012861 322 LHAQLIGVTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRT 401 (455)
Q Consensus 322 Lhv~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~ 401 (455)
|||+......|..|+..+.+. .|.+ +.++.+..+|.+|+|||||+||.|++||+.|+++|+++ ++|+...+|++
T Consensus 314 L~v~~~~~~~w~~~~~~~~~~-~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~----L~w~~~~~~~~ 387 (437)
T PLN02209 314 LHVDKGSIGEWIRDHRGIPYK-SDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKS----LNYSIIDDWRP 387 (437)
T ss_pred hCCCCCCCCCCccccchhhcc-cchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHh----cCCccCCCeee
Confidence 999853334799998755322 2333 34555555666899999999999999999999999995 45666678999
Q ss_pred eecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHHHHHHHHHcCCCC
Q 012861 402 WVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKPL 452 (455)
Q Consensus 402 w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 452 (455)
|+.+++++||+|+|+|+|||++|++|||||| |||++|++||++||.++++
T Consensus 388 w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 388 WMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred eEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999999984599999999999998 7999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=5.1e-101 Score=775.75 Aligned_cols=400 Identities=31% Similarity=0.620 Sum_probs=336.8
Q ss_pred CCCCceecCCCCC-CCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccC--
Q 012861 25 PQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS-- 101 (455)
Q Consensus 25 ~~~~~v~~lp~~~-~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~-- 101 (455)
...+.|++|||+. ++++++||||++|+++.+++||||||||+++|+++|+||||||||||||+. |+|+|+|||+++
T Consensus 18 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~ 96 (433)
T PLN03016 18 DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFE 96 (433)
T ss_pred cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeecc
Confidence 4568899999984 788999999999987677899999999999999999999999999999997 999999999975
Q ss_pred ---C--CcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeecc
Q 012861 102 ---G--DTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESY 176 (455)
Q Consensus 102 ---~--~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESY 176 (455)
+ .++++|++||++.|||||||||+||||||+++...+. +|+++|++++.||+.||++||+|+++|+||+||||
T Consensus 97 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 174 (433)
T PLN03016 97 VFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY 174 (433)
T ss_pred ccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCc
Confidence 1 3789999999999999999999999999987655442 56667799999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhcc-----cCCceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHHHHhhcCC
Q 012861 177 AGHYVPQLAQLIIQSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGS 251 (455)
Q Consensus 177 gG~yvP~lA~~i~~~n~-----~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~ 251 (455)
||||||++|++|+++|+ .||||||+||||+++|..|..++.+|+|.||+|++++++.+++.|..... .+ ..
T Consensus 175 aG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~--~~--~~ 250 (433)
T PLN03016 175 SGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY--NV--DP 250 (433)
T ss_pred cceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccc--cC--CC
Confidence 99999999999999875 39999999999999999999999999999999999999999999873110 00 12
Q ss_pred CchhHHHHHHHHHHHhcccCccccccCCCCcchhhhhhhcccccccccccCcccc---hhhhhccCcHHHHHHhccCccC
Q 012861 252 LTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKALHAQLIG 328 (455)
Q Consensus 252 ~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~yLN~~~Vr~aLhv~~~~ 328 (455)
....|.+++...... ...+|.|+++.+.|.... ...+.|.. ..++.|||+++||+||||+...
T Consensus 251 ~~~~C~~~~~~~~~~-~~~~n~yni~~~~~~~~~-------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 251 SNTQCLKLTEEYHKC-TAKINIHHILTPDCDVTN-------------VTSPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred chHHHHHHHHHHHHH-hcCCChhhccCCcccccc-------------cCCCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 246798776654433 356788998765563210 01134643 3478999999999999997532
Q ss_pred cccceeecccccccccCCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCee
Q 012861 329 VTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQA 408 (455)
Q Consensus 329 ~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v 408 (455)
...|..|+..+.+. .|.. +.++.+..++.+++|||||+||.|++||+.|+++|+++| +|+...+|++|+.++++
T Consensus 317 ~~~w~~cn~~v~~~-~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L----~w~~~~~~~~w~~~~~~ 390 (433)
T PLN03016 317 KGKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSL----NYSPIHNWRPWMINNQI 390 (433)
T ss_pred CCCCccCCcccccc-cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhC----CCCCCCCcccccCCCEe
Confidence 34799999887533 3333 445555566667999999999999999999999999954 56666789999999999
Q ss_pred eeEEEEeCCeeEEEEEcCCccccccCCcHHHHHHHHHHHcCCCC
Q 012861 409 AGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKPL 452 (455)
Q Consensus 409 ~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 452 (455)
+||+|+|+|+|||++|++|||||| |||++|++||++||+++++
T Consensus 391 ~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 391 AGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred eeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 999999975599999999999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=6.4e-100 Score=777.71 Aligned_cols=397 Identities=39% Similarity=0.750 Sum_probs=319.4
Q ss_pred CCCC-CCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccC--C-CcccccC
Q 012861 34 PGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS--G-DTLLRNE 109 (455)
Q Consensus 34 p~~~-~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~--~-~~l~~n~ 109 (455)
||.. ++++++|||||+|+++.+++||||||||+++|+++||||||||||||||++ |+|.|+|||+++ + .+++.|+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccc
Confidence 7765 678999999999987778999999999999999999999999999999997 999999999998 3 5899999
Q ss_pred CCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHH
Q 012861 110 YSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLII 189 (455)
Q Consensus 110 ~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 189 (455)
+||+++||||||||||||||||+++...+.. +++++|++++.||+.||++||+++++|+||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999988766554 899999999999999999999999999999999999999999999999
Q ss_pred Hhcc-----cCCceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHHHHhhcCCCchhHHHHHHHHH
Q 012861 190 QSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVS 264 (455)
Q Consensus 190 ~~n~-----~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~~C~~~~~~~~ 264 (455)
++|+ .||||||+||||++||..|+.++.+|+|.||+|++++++.+.+.|.... .+ ......|..+...+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~---~~--~~~~~~c~~~~~~~~ 233 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP---QC--QKAITECAAALDELS 233 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH---SS--SCCHHHHHHHHHHHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc---cc--cchhhHHHHHHHhhh
Confidence 9986 4999999999999999999999999999999999999999999886431 11 123467877776665
Q ss_pred HH-----hcccCccccccCCCCcchhhhhhhcccccccccccCcccchhhhhccCcHHHHHHhccCccCcccceeecccc
Q 012861 265 RE-----ISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTSWTVCSEVL 339 (455)
Q Consensus 265 ~~-----~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~yLN~~~Vr~aLhv~~~~~~~w~~cs~~v 339 (455)
.. ....+|.||++.+.|..... ........+++..+.+..|||+++||++|||+......|+.|+..|
T Consensus 234 ~~~~~~~~~~~~n~Ydi~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V 306 (415)
T PF00450_consen 234 CQYAISQCNGGINPYDIRQPCYNPSRS-------SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAV 306 (415)
T ss_dssp HHCHHHHHHTTSETTSTTSEETT-SHC-------TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHH
T ss_pred hhcccccccCCcceeeeeccccccccc-------cccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccc
Confidence 42 23589999999754431100 0000111222334578999999999999999732235899999987
Q ss_pred -c-ccccCCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeec--CCeeeeEEEEe
Q 012861 340 -K-YDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVE--GRQAAGWTQVY 415 (455)
Q Consensus 340 -~-~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~--~~~v~G~~k~~ 415 (455)
. ....+.+.++.+.++.||++++|||||+||+|++||+.|+++|++ .++|+...+|+.|.. +++++||+|++
T Consensus 307 ~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~----~L~w~~~~~f~~~~~~~~~~~~G~~k~~ 382 (415)
T PF00450_consen 307 NFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWID----NLNWSGKDGFRQWPRKVNGQVAGYVKQY 382 (415)
T ss_dssp HHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHH----CTECTEEEEEEEEEEETTCSEEEEEEEE
T ss_pred ccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhh----ccccCcccccccccccccccccceeEEe
Confidence 2 334567789999999999999999999999999999999999999 456667788999987 89999999999
Q ss_pred CCeeEEEEEcCCccccccCCcHHHHHHHHHHHcC
Q 012861 416 GDILSFATIRGASHEAPLSQPRRSLALFNAFLGG 449 (455)
Q Consensus 416 gn~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 449 (455)
+| |||++|++||||||+|||++|++||++||+|
T Consensus 383 ~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 383 GN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp TT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred cc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 99 9999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.9e-94 Score=735.69 Aligned_cols=388 Identities=29% Similarity=0.574 Sum_probs=331.6
Q ss_pred CCCceeEeeEEEecc-CCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCC--CcccccCCCccc
Q 012861 38 QASFQQYAGYITIDE-KQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSG--DTLLRNEYSWNK 114 (455)
Q Consensus 38 ~~~~~~~sGyl~v~~-~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~--~~l~~n~~sw~~ 114 (455)
+.++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||+. |+|.|||||+++. .+++.|++||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCccccc
Confidence 567899999999975 457899999999999999999999999999999997 9999999999984 489999999999
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 194 (455)
.+||||||||+||||||++.. .+.. +++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|+++|+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998654 4443 68899999999999999999999999999999999999999999999998753
Q ss_pred -----CCceeeEecCCCCCccccchhhhHHhhh-------ccCCChHHHHHHHH---hhchhHHHHHhhc--CCCchhHH
Q 012861 195 -----LNLKGIAIGNPLLEFNTDFNSRAEFLWS-------HGLISDSTYDIFTR---VCNYSQIRRQYAS--GSLTAVCS 257 (455)
Q Consensus 195 -----inLkGi~IGng~~dp~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~~~~~~--~~~~~~C~ 257 (455)
||||||+|||||+||..|+.+|.+|+|+ +|+|++++++.+.+ .|. ..+..|.. ......|.
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~--~~~~~c~~~~~~~~~~c~ 276 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQ--KKIKECNSNPDDADSSCS 276 (462)
T ss_pred cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHH--HHHHhccccCCCcchHHH
Confidence 9999999999999999999999999996 58999999998875 354 12223322 11234576
Q ss_pred HHHHHHHHHh----cccCccccccCCCCcchhhhhhhcccccccccccCcccc-hhhhhccCcHHHHHHhccCccCcccc
Q 012861 258 QVISQVSREI----SRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE-DETTKYLNRKDVQKALHAQLIGVTSW 332 (455)
Q Consensus 258 ~~~~~~~~~~----~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~-~~~~~yLN~~~Vr~aLhv~~~~~~~w 332 (455)
.+...|.... ..++|+||++.. |. .+.|.+ ..++.|||+++||+||||+. ..|
T Consensus 277 ~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~------------------~~~c~~~~~~~~yLN~~~Vq~AL~v~~---~~w 334 (462)
T PTZ00472 277 VARALCNEYIAVYSATGLNNYDIRKP-CI------------------GPLCYNMDNTIAFMNREDVQSSLGVKP---ATW 334 (462)
T ss_pred HHHHHHHHHHHHHHhcCCChhheecc-CC------------------CCCccCHHHHHHHhCCHHHHHHhCCCC---CCc
Confidence 5555553321 346899999864 63 234654 45899999999999999973 379
Q ss_pred eeecccccccc-cCCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHH-cCCCccccccee-ecCCeee
Q 012861 333 TVCSEVLKYDM-QNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKE-IGLNTTVPYRTW-VEGRQAA 409 (455)
Q Consensus 333 ~~cs~~v~~~~-~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~-~~~~~~~~~~~w-~~~~~v~ 409 (455)
+.|+..|...+ .|.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|. ......++|++| ..+++++
T Consensus 335 ~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~ 414 (462)
T PTZ00472 335 QSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWA 414 (462)
T ss_pred eeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEec
Confidence 99999886544 46777888999999999999999999999999999999999999873 333356889999 5788999
Q ss_pred eEEEEeC-----CeeEEEEEcCCccccccCCcHHHHHHHHHHHcCCCCC
Q 012861 410 GWTQVYG-----DILSFATIRGASHEAPLSQPRRSLALFNAFLGGKPLP 453 (455)
Q Consensus 410 G~~k~~g-----n~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~~ 453 (455)
||+|+++ + |||++|++||||||+|||+++++|+++|+.++++.
T Consensus 415 G~vk~~~~~~~~~-l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 415 GLVRSAASNTSSG-FSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred eEEEEEecccCCC-eEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 9999998 8 99999999999999999999999999999999863
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2e-72 Score=551.46 Aligned_cols=311 Identities=28% Similarity=0.547 Sum_probs=253.5
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc-
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM- 193 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~- 193 (455)
.|||||||||+||||||+++...+. +|+++|+|++.||+.||++||+|+++||||+||||||||||++|.+|+++|+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987655442 5666779999999999999999999999999999999999999999999874
Q ss_pred ----cCCceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHHHHhhcCCCchhHHHHHHHHHHHhcc
Q 012861 194 ----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISR 269 (455)
Q Consensus 194 ----~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 269 (455)
+||||||+|||||++|..|..++.+|+|.||+|++++++.+++.|..... .+ .+....|.+++...... ..
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~--~~--~~~~~~c~~~~~~~~~~-~~ 153 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY--NV--DPSNTQCLKLTEEYHKC-TA 153 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCcc--CC--CCCcHHHHHHHHHHHHH-Hh
Confidence 39999999999999999999999999999999999999999998863110 00 02245688776644332 34
Q ss_pred cCccccccCCCCcchhhhhhhcccccccccccCcccc---hhhhhccCcHHHHHHhccCccCcccceeecccccccccCC
Q 012861 270 FVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKALHAQLIGVTSWTVCSEVLKYDMQNL 346 (455)
Q Consensus 270 ~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~yLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~~d~ 346 (455)
.+|.|+++.+.|.... ...+.|.. ..++.|||+++||+||||+......|+.|+..+.+. .|.
T Consensus 154 ~~~~~~~~~~~~~~~~-------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~-~d~ 219 (319)
T PLN02213 154 KINIHHILTPDCDVTN-------------VTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYN-HDI 219 (319)
T ss_pred cCCHhhcccCcccCcc-------------CCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccccc-ccc
Confidence 6788888755563210 01134542 357999999999999999753224799999887633 343
Q ss_pred CCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcC
Q 012861 347 EIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRG 426 (455)
Q Consensus 347 ~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~ 426 (455)
. +..+.+..+|..++|||||+||.|++||+.|+++|+++| +|+...+|++|+.+++++||+|+|+++|||++|++
T Consensus 220 ~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L----~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~ 294 (319)
T PLN02213 220 V-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSL----NYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKA 294 (319)
T ss_pred c-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhc----CCCCCCCCccccCCCEeeeEEEEecCcceEEEEcC
Confidence 3 345555556667999999999999999999999999955 56666779999999999999999975599999999
Q ss_pred CccccccCCcHHHHHHHHHHHcCCCC
Q 012861 427 ASHEAPLSQPRRSLALFNAFLGGKPL 452 (455)
Q Consensus 427 AGHmvP~dqP~~a~~m~~~fl~~~~~ 452 (455)
|||||| +||++|++||++||+++++
T Consensus 295 AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 295 GGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999998 7999999999999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-68 Score=521.98 Aligned_cols=370 Identities=26% Similarity=0.466 Sum_probs=287.9
Q ss_pred eEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCC-cccc--cCCCcccCCceEEEecCCccccCCcc
Q 012861 57 ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGD-TLLR--NEYSWNKEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 57 ~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~-~l~~--n~~sw~~~an~l~iDqPvG~GfSy~~ 133 (455)
.+|||+||++++|+++|+||||||||||||+. |+|.|+||.+|+.+ +... ||+||++++||||||||+|||||++.
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc
Confidence 38889999999999999999999999999998 99999999999844 6666 99999999999999999999999972
Q ss_pred CCCCccccChHHHHHHHHHHHHHHHHHCCCCCCC--cEEEEeeccccccHHHHHHHHHHhc----ccCCceeeEecCC-C
Q 012861 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNR--EFFITGESYAGHYVPQLAQLIIQSN----MKLNLKGIAIGNP-L 206 (455)
Q Consensus 134 ~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~lA~~i~~~n----~~inLkGi~IGng-~ 206 (455)
.. .... +-..+.+|+..|++.||+.||++.+. |+||+||||||+|+|.||.+|+++| ..+||++++|||| +
T Consensus 165 ~~-e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~ 242 (498)
T COG2939 165 GD-EKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLW 242 (498)
T ss_pred cc-cccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcc
Confidence 22 2222 55567789999999999999999877 9999999999999999999999984 2399999999999 9
Q ss_pred CCccccchhhhHHhhhcc----CCChHHHHHHHHhhchhHHHHHhhcCC----CchhHHHHHHHHHHHh--------ccc
Q 012861 207 LEFNTDFNSRAEFLWSHG----LISDSTYDIFTRVCNYSQIRRQYASGS----LTAVCSQVISQVSREI--------SRF 270 (455)
Q Consensus 207 ~dp~~~~~~~~~~~~~~g----li~~~~~~~~~~~c~~~~~~~~~~~~~----~~~~C~~~~~~~~~~~--------~~~ 270 (455)
|+|..|+..|..++..++ ..+.+.++.+.+.|+....+ ....+. ....|..+...|.... .+.
T Consensus 243 t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~-~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~ 321 (498)
T COG2939 243 TDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCL-ALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRL 321 (498)
T ss_pred cChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHh-hhccCCCCchhhhHHHHHHHHHHhcchhhhccccccc
Confidence 999999999999998654 55667788888878754322 222222 2334665555544321 123
Q ss_pred CccccccCCCCcchhhhhhhcccccccccccCcccch--hhhhccCcHHHHHHhccCccCcccceeecccccccc----c
Q 012861 271 VDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVED--ETTKYLNRKDVQKALHAQLIGVTSWTVCSEVLKYDM----Q 344 (455)
Q Consensus 271 ~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~c~~~--~~~~yLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~----~ 344 (455)
.|.|+++. .|.... -...|++. ...+|++...+++.+... +..|..|+..+..++ .
T Consensus 322 ~n~y~~r~-~~~d~g--------------~~~~~y~~~~~~ld~~~~~~~~~~~~~~---~d~~~~c~t~a~~~f~~~~~ 383 (498)
T COG2939 322 LNVYDIRE-ECRDPG--------------LGGSCYDTLSTSLDYFNFDPEQEVNDPE---VDNISGCTTDAMTDFLTFTG 383 (498)
T ss_pred cccccchh-hcCCCC--------------cccccccceeeccccccccchhcccccc---ccchhccchHHHHhhhhhcC
Confidence 67888775 342100 01235443 357788877777777654 347999998876444 4
Q ss_pred CCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHH--HcCCCcccccceee-cCCeeeeEEEEeCCeeEE
Q 012861 345 NLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAK--EIGLNTTVPYRTWV-EGRQAAGWTQVYGDILSF 421 (455)
Q Consensus 345 d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~--~~~~~~~~~~~~w~-~~~~v~G~~k~~gn~Ltf 421 (455)
++..+....+..++.+++.+++|.||.|.+||+.|++.|..+|+| ..++....-+--|. ...+..|-.+++.| ++|
T Consensus 384 ~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n-~~~ 462 (498)
T COG2939 384 GWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN-LTF 462 (498)
T ss_pred CcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCC-ceE
Confidence 677778888899999999999999999999999999999999986 33444322222232 13445555566667 999
Q ss_pred EEEcCCccccccCCcHHHHHHHHHHHcC
Q 012861 422 ATIRGASHEAPLSQPRRSLALFNAFLGG 449 (455)
Q Consensus 422 ~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 449 (455)
+.++.||||||.|+|+.+++|++.|+.+
T Consensus 463 ~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 463 LRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EEEecCcceeecCChHHHHHHHHHHHhh
Confidence 9999999999999999999999999987
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-67 Score=482.04 Aligned_cols=392 Identities=24% Similarity=0.359 Sum_probs=306.3
Q ss_pred eEeeEEEeccCCCceEEEEEEeccCC-CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEE
Q 012861 43 QYAGYITIDEKQQRALFYYFVEAATE-AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYL 121 (455)
Q Consensus 43 ~~sGyl~v~~~~~~~lfy~~~es~~~-~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~i 121 (455)
.-.||+++. .+.++|+|++.+..+ ...+|+.+||+||||+||..+|+|+|+||...+ +.+|+.+|.+.||||||
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~---~~~r~~TWlk~adllfv 77 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD---GSPRDWTWLKDADLLFV 77 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC---CCcCCchhhhhccEEEe
Confidence 347999995 678999999988754 378999999999999999988999999999976 44899999999999999
Q ss_pred ecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc----CCc
Q 012861 122 ESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK----LNL 197 (455)
Q Consensus 122 DqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~----inL 197 (455)
|.|||+||||.+..+.|.+ +++++|.|+.+.|+.||..||+|+.+||||+-|||||+.++.+|..+.+.-+. .|+
T Consensus 78 DnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf 156 (414)
T KOG1283|consen 78 DNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNF 156 (414)
T ss_pred cCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecc
Confidence 9999999999988888876 89999999999999999999999999999999999999999999998886543 899
Q ss_pred eeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHH---hhchhHHHHHhhcCCCc--hhHHHHHHHHHHHhcccCc
Q 012861 198 KGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTR---VCNYSQIRRQYASGSLT--AVCSQVISQVSREISRFVD 272 (455)
Q Consensus 198 kGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~---~c~~~~~~~~~~~~~~~--~~C~~~~~~~~~~~~~~~n 272 (455)
.|+++|+.||+|..-+.++.+|++..+++|+...+.... .|.- ....+... ..|---.+.+......+++
T Consensus 157 ~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~-----~v~~g~~~~AT~~Wg~~e~li~~~sn~Vd 231 (414)
T KOG1283|consen 157 IGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKG-----GVDGGKWGGATGGWGGGENLISRESNGVD 231 (414)
T ss_pred eeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcc-----cccCCccccccccccCcCcceeecccCcc
Confidence 999999999999999999999999999999987766543 2320 00011111 1121111111111135789
Q ss_pred cccccCCCCcchhhhhhhcc-ccc----ccccccC-cccchhhhhccCcHHHHHHhccCccCcccceeeccccc-ccccC
Q 012861 273 TYDVTLDVCLPSVLLQSKML-SQL----QDKEEID-VCVEDETTKYLNRKDVQKALHAQLIGVTSWTVCSEVLK-YDMQN 345 (455)
Q Consensus 273 ~ydi~~~~c~~~~~~~~~~~-~~~----~~~~~~~-~c~~~~~~~yLN~~~Vr~aLhv~~~~~~~w~~cs~~v~-~~~~d 345 (455)
.|++..+.-.........+. .+. +...... +-..+.+++++|-| ||++|++-+.+ ..|-..+..++ +...|
T Consensus 232 fYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~-~~wGgqsg~vFt~lq~d 309 (414)
T KOG1283|consen 232 FYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG-VKWGGQSGDVFTKLQGD 309 (414)
T ss_pred eeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC-CcccCcCCchHHHhhhh
Confidence 99987654332221111110 000 0000000 00124588999976 99999987654 38988887775 44568
Q ss_pred CCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHH-cCCCcccccceeecCCeeeeEEEEeCCeeEEEEE
Q 012861 346 LEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKE-IGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATI 424 (455)
Q Consensus 346 ~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~-~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V 424 (455)
+|.|++..+.+||+.|++|.||||++|.||++.|+++|+++|+|. ..-....+|...+.+...+||.|+|+| |.|..|
T Consensus 310 FMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wi 388 (414)
T KOG1283|consen 310 FMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWI 388 (414)
T ss_pred hcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcc-ceeEEe
Confidence 999999999999999999999999999999999999999988873 222234455555567788999999999 999999
Q ss_pred cCCccccccCCcHHHHHHHHHHHc
Q 012861 425 RGASHEAPLSQPRRSLALFNAFLG 448 (455)
Q Consensus 425 ~~AGHmvP~dqP~~a~~m~~~fl~ 448 (455)
..||||||.|+|++|.+|++-+.+
T Consensus 389 lraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 389 LRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred ecccCcccCCCHHHHhhheeeccc
Confidence 999999999999999999987654
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.37 E-value=5.3e-11 Score=113.94 Aligned_cols=129 Identities=23% Similarity=0.276 Sum_probs=81.0
Q ss_pred EeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEec
Q 012861 44 YAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLES 123 (455)
Q Consensus 44 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDq 123 (455)
..++++++ +..+.|.-+. .+...|.||+++||||+++.+...+.+. +. .+..+++.+|.
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~---------l~------~~g~~vi~~d~ 61 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL---------LK------EEGREVIMYDQ 61 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH---------HH------hcCCEEEEEcC
Confidence 45667663 3344444332 2233588999999999987642322110 00 12488999999
Q ss_pred CCccccCCccCCCC-ccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEe
Q 012861 124 PAGVGFSYSANKSF-YGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAI 202 (455)
Q Consensus 124 PvG~GfSy~~~~~~-~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~I 202 (455)
| |.|.|....... . .+-+..++++..+++. +..++++|+|+|+||..+..+|..-.+ .++++++
T Consensus 62 ~-G~G~s~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p~-----~v~~lvl 126 (288)
T TIGR01250 62 L-GCGYSDQPDDSDEL--WTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYGQ-----HLKGLII 126 (288)
T ss_pred C-CCCCCCCCCccccc--ccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCcc-----ccceeeE
Confidence 9 999987533221 1 1344555565554442 234569999999999999988875433 5889999
Q ss_pred cCCCCC
Q 012861 203 GNPLLE 208 (455)
Q Consensus 203 Gng~~d 208 (455)
.++...
T Consensus 127 ~~~~~~ 132 (288)
T TIGR01250 127 SSMLDS 132 (288)
T ss_pred eccccc
Confidence 887653
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.33 E-value=6.6e-11 Score=113.42 Aligned_cols=108 Identities=17% Similarity=0.075 Sum_probs=75.1
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHH
Q 012861 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~ 148 (455)
+.+.|.||+++|.+|.+..+ ..+.+ ...+..+++.+|.| |.|.|.......+ +-+..++
T Consensus 25 ~~~~~~vv~~hG~~~~~~~~-~~~~~----------------~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~ 83 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHSW-RDLMP----------------PLARSFRVVAPDLP-GHGFTRAPFRFRF---TLPSMAE 83 (278)
T ss_pred CCCCCeEEEEcCCCCCHHHH-HHHHH----------------HHhhCcEEEeecCC-CCCCCCCccccCC---CHHHHHH
Confidence 34568999999998887775 32211 11234789999988 9999875433222 4455666
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
++.++++. +..++++|+|+|+||..+..+|.+..+ .++++++.++..++
T Consensus 84 ~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 84 DLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGPV-----TPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCCc-----ccceEEEEcCcccc
Confidence 77766653 234578999999999988888765433 47899999887654
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.32 E-value=5.5e-11 Score=112.06 Aligned_cols=116 Identities=21% Similarity=0.183 Sum_probs=80.1
Q ss_pred EEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCc
Q 012861 59 FYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFY 138 (455)
Q Consensus 59 fy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~ 138 (455)
+|..+.. ..++.|+||+++|.+|++..+ ..+. .-+.+..+++.+|.| |.|.|.......+
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~-~~~~----------------~~l~~~~~vi~~D~~-G~G~S~~~~~~~~ 61 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYW-APQL----------------DVLTQRFHVVTYDHR-GTGRSPGELPPGY 61 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHH-HHHH----------------HHHHhccEEEEEcCC-CCCCCCCCCcccC
Confidence 4544432 224679999999998887776 3221 112345799999999 9999975433333
Q ss_pred cccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 139 GSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 139 ~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+-++.++++.++++. +...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 62 ---~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 62 ---SIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE-----RLLSLVLINAWSRP 117 (257)
T ss_pred ---CHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH-----HhHHheeecCCCCC
Confidence 455566676666653 234579999999999999999876554 38899988887654
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.28 E-value=2e-10 Score=111.76 Aligned_cols=124 Identities=15% Similarity=0.041 Sum_probs=84.5
Q ss_pred eEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCC
Q 012861 46 GYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPA 125 (455)
Q Consensus 46 Gyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPv 125 (455)
=|+++ .+..++|.-. ++ ..|.||+|+|.++++.++ ..+.+ .+.+..+++.+|.|
T Consensus 11 ~~~~~---~~~~i~y~~~---G~--~~~~vlllHG~~~~~~~w-~~~~~----------------~L~~~~~vi~~Dlp- 64 (294)
T PLN02824 11 RTWRW---KGYNIRYQRA---GT--SGPALVLVHGFGGNADHW-RKNTP----------------VLAKSHRVYAIDLL- 64 (294)
T ss_pred ceEEE---cCeEEEEEEc---CC--CCCeEEEECCCCCChhHH-HHHHH----------------HHHhCCeEEEEcCC-
Confidence 36776 2456665421 21 237899999999999887 43311 13455699999999
Q ss_pred ccccCCccCCCCcc---ccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEe
Q 012861 126 GVGFSYSANKSFYG---SVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAI 202 (455)
Q Consensus 126 G~GfSy~~~~~~~~---~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~I 202 (455)
|.|.|...+..... ..+-++.|+++.++|+.. ...+++|.|+|.||..+-.+|.+-.+ .++++++
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lil 132 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE-----LVRGVML 132 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-----heeEEEE
Confidence 99999754321100 014455677777777632 34689999999999999888876665 4899999
Q ss_pred cCCCC
Q 012861 203 GNPLL 207 (455)
Q Consensus 203 Gng~~ 207 (455)
.|+..
T Consensus 133 i~~~~ 137 (294)
T PLN02824 133 INISL 137 (294)
T ss_pred ECCCc
Confidence 99764
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.28 E-value=3.5e-10 Score=108.95 Aligned_cols=125 Identities=14% Similarity=0.137 Sum_probs=83.9
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCccccCCc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYS 132 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~GfSy~ 132 (455)
.+..|+|.+++... ..+|+||.++|.+++|..+ -.+ -..+.+ ...++.+|.| |.|.|..
T Consensus 9 ~g~~l~~~~~~~~~--~~~~~v~llHG~~~~~~~~-~~~----------------~~~l~~~g~~via~D~~-G~G~S~~ 68 (276)
T PHA02857 9 DNDYIYCKYWKPIT--YPKALVFISHGAGEHSGRY-EEL----------------AENISSLGILVFSHDHI-GHGRSNG 68 (276)
T ss_pred CCCEEEEEeccCCC--CCCEEEEEeCCCccccchH-HHH----------------HHHHHhCCCEEEEccCC-CCCCCCC
Confidence 45689997776642 3469999999998777775 222 112333 4689999988 9999964
Q ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 133 ~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.... .. +-....+|+.+++..+.+.++ ..+++|+|+|+||.-+..+|.+-.+ .++|+++.+|.+++
T Consensus 69 ~~~~-~~--~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~p~-----~i~~lil~~p~~~~ 134 (276)
T PHA02857 69 EKMM-ID--DFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKNPN-----LFTAMILMSPLVNA 134 (276)
T ss_pred ccCC-cC--CHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhCcc-----ccceEEEecccccc
Confidence 3211 11 223345667676665444443 5789999999999877776654322 48999999987653
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.28 E-value=5.9e-10 Score=109.00 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=91.0
Q ss_pred CCCceecCCCCCCCCceeEeeEEEeccCCCc--eEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCC
Q 012861 26 QADKIISLPGQPQASFQQYAGYITIDEKQQR--ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGD 103 (455)
Q Consensus 26 ~~~~v~~lp~~~~~~~~~~sGyl~v~~~~~~--~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~ 103 (455)
++-++.+||.+|- .-.|+.++...+. .++|.- ..++ +.|.||.++|.|+.+..+ ..+.+
T Consensus 7 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w-~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYPF-----APHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLY-RKMIP--------- 67 (302)
T ss_pred CcccccCCcCCCC-----CceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhH-HHHHH---------
Confidence 4456788887752 3367888653333 466552 2233 468899999999888776 33210
Q ss_pred cccccCCCcc-cCCceEEEecCCccccCCccCC-CCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccH
Q 012861 104 TLLRNEYSWN-KEANMLYLESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYV 181 (455)
Q Consensus 104 ~l~~n~~sw~-~~an~l~iDqPvG~GfSy~~~~-~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 181 (455)
... +..+++.+|.| |.|.|..... ..| +-+..++++.++|+. +...++.|.|+|+||..+
T Consensus 68 -------~L~~~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 68 -------ILAAAGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred -------HHHhCCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHH
Confidence 011 34789999999 9999853221 122 444555566555542 334689999999999999
Q ss_pred HHHHHHHHHhcccCCceeeEecCCC
Q 012861 182 PQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 182 P~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
-.+|.+-.+ .++++++.++.
T Consensus 130 ~~~a~~~p~-----~v~~lvl~~~~ 149 (302)
T PRK00870 130 LRLAAEHPD-----RFARLVVANTG 149 (302)
T ss_pred HHHHHhChh-----heeEEEEeCCC
Confidence 888876544 48899988764
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.26 E-value=5.4e-10 Score=108.53 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=75.9
Q ss_pred EeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEec
Q 012861 44 YAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLES 123 (455)
Q Consensus 44 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDq 123 (455)
.+.+++++ +..++|.- .+ +.|.||.++|.|..+..+ -.+. ..+.+..+++.+|.
T Consensus 15 ~~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~-~~~~----------------~~l~~~~~vi~~D~ 68 (286)
T PRK03204 15 ESRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLY-RDII----------------VALRDRFRCVAPDY 68 (286)
T ss_pred cceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHH-HHHH----------------HHHhCCcEEEEECC
Confidence 34678873 44566542 22 247899999998655554 2210 11244579999999
Q ss_pred CCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEec
Q 012861 124 PAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (455)
Q Consensus 124 PvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IG 203 (455)
| |.|.|-......+ +-+..++++..+++ . +...+++|.|+|+||.-+-.+|..-.+ .+++++++
T Consensus 69 ~-G~G~S~~~~~~~~---~~~~~~~~~~~~~~----~---~~~~~~~lvG~S~Gg~va~~~a~~~p~-----~v~~lvl~ 132 (286)
T PRK03204 69 L-GFGLSERPSGFGY---QIDEHARVIGEFVD----H---LGLDRYLSMGQDWGGPISMAVAVERAD-----RVRGVVLG 132 (286)
T ss_pred C-CCCCCCCCCcccc---CHHHHHHHHHHHHH----H---hCCCCEEEEEECccHHHHHHHHHhChh-----heeEEEEE
Confidence 8 9998854322122 33444545544444 2 234579999999999876666654333 58999998
Q ss_pred CCCC
Q 012861 204 NPLL 207 (455)
Q Consensus 204 ng~~ 207 (455)
++..
T Consensus 133 ~~~~ 136 (286)
T PRK03204 133 NTWF 136 (286)
T ss_pred Cccc
Confidence 8754
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.25 E-value=1.6e-10 Score=109.57 Aligned_cols=104 Identities=15% Similarity=0.186 Sum_probs=77.2
Q ss_pred CCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHH
Q 012861 67 TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIA 146 (455)
Q Consensus 67 ~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~ 146 (455)
.++.+.|.||+++|.+|.+..+ ..+.+ .+.+..+++.+|+| |.|.|.... .+ +-++.
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~-~~~~~----------------~l~~~~~vi~~D~~-G~G~s~~~~--~~---~~~~~ 67 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNL-GVLAR----------------DLVNDHDIIQVDMR-NHGLSPRDP--VM---NYPAM 67 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHH-HHHHH----------------HHhhCCeEEEECCC-CCCCCCCCC--CC---CHHHH
Confidence 4566789999999999988776 43311 12356799999999 999886432 22 44556
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCC
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng 205 (455)
++|+.++|.. +...+++|.|+|.||..+..+|.+..+ .++++++.++
T Consensus 68 ~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~~-----~v~~lvli~~ 114 (255)
T PRK10673 68 AQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAPD-----RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCHh-----hcceEEEEec
Confidence 7788888864 234579999999999999999987665 3889988764
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=1.9e-09 Score=106.74 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=87.0
Q ss_pred eeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEE
Q 012861 42 QQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLY 120 (455)
Q Consensus 42 ~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~ 120 (455)
+...+++... .+..++|+.+........+|+||+++|..+.++-.+-.+ ...+. +..+|+.
T Consensus 31 ~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~----------------~~~L~~~Gy~V~~ 92 (330)
T PLN02298 31 KGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST----------------AIFLAQMGFACFA 92 (330)
T ss_pred ccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH----------------HHHHHhCCCEEEE
Confidence 3456777763 467888854432222234689999999954332110000 01233 3579999
Q ss_pred EecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceee
Q 012861 121 LESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGI 200 (455)
Q Consensus 121 iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi 200 (455)
+|+| |.|.|.... .+.. +-+..++|+..+++..... .++.+.+++|+|+|.||..+..+|.+-.+ .++|+
T Consensus 93 ~D~r-GhG~S~~~~--~~~~-~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~p~-----~v~~l 162 (330)
T PLN02298 93 LDLE-GHGRSEGLR--AYVP-NVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLANPE-----GFDGA 162 (330)
T ss_pred ecCC-CCCCCCCcc--ccCC-CHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcCcc-----cceeE
Confidence 9999 999985322 2211 3455677888887754332 22334589999999999977766653222 48999
Q ss_pred EecCCCCCc
Q 012861 201 AIGNPLLEF 209 (455)
Q Consensus 201 ~IGng~~dp 209 (455)
++.+++...
T Consensus 163 vl~~~~~~~ 171 (330)
T PLN02298 163 VLVAPMCKI 171 (330)
T ss_pred EEecccccC
Confidence 999987643
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.19 E-value=3.1e-09 Score=102.42 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=67.5
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc-ccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw-~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
+.|.||+++|.++.+..+ ..+. .+-... .+..+++.+|.| |.|.|........ .....+++
T Consensus 29 ~~~~ivllHG~~~~~~~~-~~~~-------------~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~~ 90 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGW-SNYY-------------RNIGPFVDAGYRVILKDSP-GFNKSDAVVMDEQ---RGLVNARA 90 (282)
T ss_pred CCCeEEEECCCCCchhhH-HHHH-------------HHHHHHHhCCCEEEEECCC-CCCCCCCCcCccc---ccchhHHH
Confidence 357799999987655444 2110 000111 235899999998 9999864321111 11123555
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+.++++. +...++++.|+|+||..+-.+|.+-.+ .++++++.+|.
T Consensus 91 l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 135 (282)
T TIGR03343 91 VKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPD-----RIGKLILMGPG 135 (282)
T ss_pred HHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChH-----hhceEEEECCC
Confidence 5555543 345689999999999999999986655 37888888764
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.18 E-value=4.3e-09 Score=105.63 Aligned_cols=104 Identities=19% Similarity=0.075 Sum_probs=69.8
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHH
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDN 150 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~ 150 (455)
+.|.||.|+|.|+.+..+ ..+.+ ...+...++.+|.| |.|.|.......| +-+..++++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~~~----------------~L~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~~l 145 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRNIG----------------VLAKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAELI 145 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHH----------------HHhcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHHHH
Confidence 347889999999888886 32211 12345789999999 9998864322223 444566677
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHH-HHhcccCCceeeEecCCCC
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLI-IQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i-~~~n~~inLkGi~IGng~~ 207 (455)
.++|+. +...+++|.|+|+||..+-.+|..- .+ .++|+++.|+..
T Consensus 146 ~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~~P~-----rV~~LVLi~~~~ 191 (360)
T PLN02679 146 LDFLEE-------VVQKPTVLIGNSVGSLACVIAASESTRD-----LVRGLVLLNCAG 191 (360)
T ss_pred HHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhcChh-----hcCEEEEECCcc
Confidence 777663 2345899999999997665555421 23 388999988753
No 20
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.17 E-value=1.4e-09 Score=105.82 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=81.7
Q ss_pred CceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccC
Q 012861 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (455)
Q Consensus 55 ~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~ 134 (455)
+..++|.-. . +.|.||+++|.|+++..+ -.+. -.+.+...++-+|.| |.|.|....
T Consensus 16 g~~i~y~~~--G----~g~~vvllHG~~~~~~~w-~~~~----------------~~L~~~~~via~D~~-G~G~S~~~~ 71 (295)
T PRK03592 16 GSRMAYIET--G----EGDPIVFLHGNPTSSYLW-RNII----------------PHLAGLGRCLAPDLI-GMGASDKPD 71 (295)
T ss_pred CEEEEEEEe--C----CCCEEEEECCCCCCHHHH-HHHH----------------HHHhhCCEEEEEcCC-CCCCCCCCC
Confidence 455666421 1 347899999999988887 3221 123444589999999 999996433
Q ss_pred CCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 135 ~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
. .+ +-+..|+++..+++. +...+++|.|+|.||..+-.+|.+-.+ .++++++.++...|
T Consensus 72 ~-~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lil~~~~~~~ 130 (295)
T PRK03592 72 I-DY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD-----RVRGIAFMEAIVRP 130 (295)
T ss_pred C-CC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh-----heeEEEEECCCCCC
Confidence 2 23 455667777777664 234689999999999999888887666 48999999986554
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.12 E-value=6.1e-09 Score=104.12 Aligned_cols=128 Identities=14% Similarity=0.147 Sum_probs=81.7
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCccccCCc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYS 132 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~GfSy~ 132 (455)
.+..+|+..+...+ ...+|+||+++|..+.++.+.-.+ -..+.+ ..+++-+|.| |.|.|..
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~----------------~~~l~~~g~~v~~~D~~-G~G~S~~ 131 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGI----------------ARKIASSGYGVFAMDYP-GFGLSEG 131 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHH----------------HHHHHhCCCEEEEecCC-CCCCCCC
Confidence 35678875543322 234699999999866555421111 012333 4789999999 9999864
Q ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 133 ~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
.. .+.. +-+..++|+.++++.. ...+++...+++|+|+|+||..+..+|.+-.+ .++|+++.+|...
T Consensus 132 ~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~-----~v~glVLi~p~~~ 198 (349)
T PLN02385 132 LH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN-----AWDGAILVAPMCK 198 (349)
T ss_pred CC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcc-----hhhheeEeccccc
Confidence 32 2211 3345566777776643 33334556689999999999988777654333 4789999987653
No 22
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.11 E-value=3.2e-09 Score=102.34 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=80.0
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCcc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~ 133 (455)
++..+.|+..+. + ...|.||+++|-++.+..+ ..+.+ . ..+..+++.+|.| |.|.|-..
T Consensus 10 ~~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~~--------------~--L~~~~~vi~~Dl~-G~G~S~~~ 68 (276)
T TIGR02240 10 DGQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFIE--------------A--LDPDLEVIAFDVP-GVGGSSTP 68 (276)
T ss_pred CCcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHHH--------------H--hccCceEEEECCC-CCCCCCCC
Confidence 345788877532 2 2346789999987777765 32211 1 2345799999999 99999643
Q ss_pred CCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 134 ~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
. ..+ +-+..++++.++|.. +.-.+++|+|+|+||..+-.+|.+-.+ .++++++.|+...
T Consensus 69 ~-~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~-----~v~~lvl~~~~~~ 127 (276)
T TIGR02240 69 R-HPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE-----RCKKLILAATAAG 127 (276)
T ss_pred C-CcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH-----HhhheEEeccCCc
Confidence 2 222 334455566666553 223579999999999999888876655 3899999998754
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.08 E-value=7.3e-09 Score=96.64 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
..+|++|.++|-++++..+ ..+.| ...+..+++.+|.| |.|.|.... ..+ +-++.+++
T Consensus 11 ~~~~~li~~hg~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~-~~~---~~~~~~~~ 68 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRMW-DPVLP----------------ALTPDFRVLRYDKR-GHGLSDAPE-GPY---SIEDLADD 68 (251)
T ss_pred CCCCeEEEEcCcccchhhH-HHHHH----------------HhhcccEEEEecCC-CCCCCCCCC-CCC---CHHHHHHH
Confidence 3679999999876555554 22211 11245799999999 999885332 222 44555666
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+.++++.+ ...+++|+|+|+||..+-.+|.+-.+ .++++++.++.
T Consensus 69 ~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~-----~v~~li~~~~~ 113 (251)
T TIGR02427 69 VLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPD-----RVRALVLSNTA 113 (251)
T ss_pred HHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHH-----HhHHHhhccCc
Confidence 66666532 24579999999999999888876544 36777776643
No 24
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.08 E-value=1.2e-08 Score=102.70 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=83.0
Q ss_pred CceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceE
Q 012861 40 SFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANML 119 (455)
Q Consensus 40 ~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l 119 (455)
+.++-+|+... .++-.+||. +. .+.+.|.||.++|.|+.+..+ -.+.+ ...+..+++
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~w-~~~~~----------------~L~~~~~Vi 157 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYSY-RKVLP----------------VLSKNYHAI 157 (383)
T ss_pred cccccceeEEc--CCceEEEEE--ec--CCCCCCeEEEECCCCCCHHHH-HHHHH----------------HHhcCCEEE
Confidence 34455555543 233445543 22 234568999999999887776 22211 123457999
Q ss_pred EEecCCccccCCccCCC---CccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCC
Q 012861 120 YLESPAGVGFSYSANKS---FYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLN 196 (455)
Q Consensus 120 ~iDqPvG~GfSy~~~~~---~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~in 196 (455)
.+|.| |.|.|...... .| +-+..++++..+++. +...+++|+|+|+||..+-.+|.+-.+ .
T Consensus 158 a~Dlp-G~G~S~~p~~~~~~~y---s~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~P~-----~ 221 (383)
T PLN03084 158 AFDWL-GFGFSDKPQPGYGFNY---TLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAHPD-----K 221 (383)
T ss_pred EECCC-CCCCCCCCcccccccC---CHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhChH-----h
Confidence 99999 99999754321 22 445556666666654 234579999999999766666665444 4
Q ss_pred ceeeEecCCCC
Q 012861 197 LKGIAIGNPLL 207 (455)
Q Consensus 197 LkGi~IGng~~ 207 (455)
++++++.|+..
T Consensus 222 v~~lILi~~~~ 232 (383)
T PLN03084 222 IKKLILLNPPL 232 (383)
T ss_pred hcEEEEECCCC
Confidence 89999999764
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.05 E-value=4.7e-10 Score=102.84 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=73.1
Q ss_pred EEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHH
Q 012861 75 VLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFL 154 (455)
Q Consensus 75 ~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL 154 (455)
||+++|++|.+..+ ..+.+ .+.+..+++.+|.| |.|.|..... +...+-++.++++.++|
T Consensus 1 vv~~hG~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~~l 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAE----------------ALARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAELL 60 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHH----------------HHHTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHHH----------------HHhCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhhcc
Confidence 78999999988776 33311 11267889999999 9999976442 11114455566666666
Q ss_pred HHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 155 EGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 155 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+. . ..++++|+|+|+||..+..+|.+..+ .++|+++.++....
T Consensus 61 ~~----~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 61 DA----L---GIKKVILVGHSMGGMIALRLAARYPD-----RVKGLVLLSPPPPL 103 (228)
T ss_dssp HH----T---TTSSEEEEEETHHHHHHHHHHHHSGG-----GEEEEEEESESSSH
T ss_pred cc----c---cccccccccccccccccccccccccc-----ccccceeecccccc
Confidence 53 2 23689999999999999988877555 59999999988765
No 26
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.02 E-value=1.3e-08 Score=102.36 Aligned_cols=103 Identities=20% Similarity=0.131 Sum_probs=69.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
.+.|.||+++|.+|++..+ ..+.+ ...+..+++-+|.| |.|.|-.... .. +-++.+++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-g~G~s~~~~~-~~---~~~~~~~~ 186 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNW-LFNHA----------------ALAAGRPVIALDLP-GHGASSKAVG-AG---SLDELAAA 186 (371)
T ss_pred CCCCeEEEECCCCCccchH-HHHHH----------------HHhcCCEEEEEcCC-CCCCCCCCCC-CC---CHHHHHHH
Confidence 4568899999999988876 33321 11223789999998 9998843221 11 44445555
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+..+++ . +...+++|.|+|+||..+..+|..-.+ .++++++.++.
T Consensus 187 ~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~~-----~v~~lv~~~~~ 231 (371)
T PRK14875 187 VLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAPQ-----RVASLTLIAPA 231 (371)
T ss_pred HHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCch-----heeEEEEECcC
Confidence 555554 2 334689999999999999988876433 47888887764
No 27
>PLN02578 hydrolase
Probab=99.01 E-value=2.5e-08 Score=99.94 Aligned_cols=112 Identities=15% Similarity=0.105 Sum_probs=75.7
Q ss_pred CceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccC
Q 012861 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (455)
Q Consensus 55 ~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~ 134 (455)
+.+++|.-.. +.|-||.++|-++.+..+ .... ....+..+++.+|.| |.|.|....
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w-~~~~----------------~~l~~~~~v~~~D~~-G~G~S~~~~ 130 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHW-RYNI----------------PELAKKYKVYALDLL-GFGWSDKAL 130 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHH-HHHH----------------HHHhcCCEEEEECCC-CCCCCCCcc
Confidence 4567765322 235578999887665554 2210 112345789999999 999886432
Q ss_pred CCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 135 ~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
..| +.+..++++.+|++.. ...+++|.|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 131 -~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~-----~v~~lvLv~~~ 186 (354)
T PLN02578 131 -IEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE-----LVAGVALLNSA 186 (354)
T ss_pred -ccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH-----hcceEEEECCC
Confidence 223 4445566777777642 24689999999999999888887766 48999998864
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.01 E-value=1.9e-08 Score=96.54 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=93.3
Q ss_pred CceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceE
Q 012861 40 SFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANML 119 (455)
Q Consensus 40 ~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l 119 (455)
+.+-.+-|+.+.. +.. -|.++-...+++.+-++.++|=-+.+++++- |=.+..+..||-
T Consensus 62 ~v~~~~~~v~i~~--~~~--iw~~~~~~~~~~~~plVliHGyGAg~g~f~~-----------------Nf~~La~~~~vy 120 (365)
T KOG4409|consen 62 PVPYSKKYVRIPN--GIE--IWTITVSNESANKTPLVLIHGYGAGLGLFFR-----------------NFDDLAKIRNVY 120 (365)
T ss_pred CCCcceeeeecCC--Cce--eEEEeecccccCCCcEEEEeccchhHHHHHH-----------------hhhhhhhcCceE
Confidence 4444566777752 222 2344434445777888889976444444322 445666789999
Q ss_pred EEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCcee
Q 012861 120 YLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKG 199 (455)
Q Consensus 120 ~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkG 199 (455)
.||+| |-|.|-...-. . +-+.+-+.+++-+++|..+.. =.+.+|.|||+||..+...|.+-.++ ++-
T Consensus 121 aiDll-G~G~SSRP~F~---~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer-----V~k 187 (365)
T KOG4409|consen 121 AIDLL-GFGRSSRPKFS---I-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER-----VEK 187 (365)
T ss_pred Eeccc-CCCCCCCCCCC---C-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh-----hce
Confidence 99999 88888654322 1 222233478888999998763 34899999999999998888877774 889
Q ss_pred eEecCCCCCcc
Q 012861 200 IAIGNPLLEFN 210 (455)
Q Consensus 200 i~IGng~~dp~ 210 (455)
++|.+||--|.
T Consensus 188 LiLvsP~Gf~~ 198 (365)
T KOG4409|consen 188 LILVSPWGFPE 198 (365)
T ss_pred EEEeccccccc
Confidence 99999997664
No 29
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.99 E-value=1e-08 Score=97.50 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=66.2
Q ss_pred CEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHH
Q 012861 73 PLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (455)
Q Consensus 73 Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~ 152 (455)
|.||.++|.++++..+ -.+ -..+.+..+++.+|.| |.|.|...+ .+ +-++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~~----------------~~~L~~~~~vi~~Dl~-G~G~S~~~~--~~---~~~~~~~~l~~ 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCI----------------DEELSSHFTLHLVDLP-GFGRSRGFG--AL---SLADMAEAVLQ 70 (256)
T ss_pred CeEEEECCCCCChhHH-HHH----------------HHHHhcCCEEEEecCC-CCCCCCCCC--CC---CHHHHHHHHHh
Confidence 5699999998888887 222 1223466899999999 999986432 22 33334444332
Q ss_pred HHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 153 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+...+++|.|+|+||.-+..+|.+-.+ .++++++.|+.
T Consensus 71 -----------~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lili~~~ 108 (256)
T PRK10349 71 -----------QAPDKAIWLGWSLGGLVASQIALTHPE-----RVQALVTVASS 108 (256)
T ss_pred -----------cCCCCeEEEEECHHHHHHHHHHHhChH-----hhheEEEecCc
Confidence 123579999999999999988875444 48899988763
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.97 E-value=8e-08 Score=97.80 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=71.8
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
.+.|.||.++|.++.++.+ .-. -..+.+..+++.+|.| |.|.|...+. .+ . +.++..+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~-~~~----------------~~~L~~~~~vi~~D~r-G~G~S~~~~~-~~-~-~~~~~~~~ 161 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFF-FRN----------------FDALASRFRVIAIDQL-GWGGSSRPDF-TC-K-STEETEAW 161 (402)
T ss_pred CCCCEEEEECCCCcchhHH-HHH----------------HHHHHhCCEEEEECCC-CCCCCCCCCc-cc-c-cHHHHHHH
Confidence 4579999999998776665 211 1123345789999999 9998853221 11 1 22333334
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+.+.+..|.+.. ...+++|.|+|+||..+..+|.+-.+ .++++++.++..
T Consensus 162 ~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~-----~v~~lvl~~p~~ 211 (402)
T PLN02894 162 FIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE-----HVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch-----hhcEEEEECCcc
Confidence 555556665543 23589999999999988877766544 488999988764
No 31
>PRK06489 hypothetical protein; Provisional
Probab=98.96 E-value=1.7e-07 Score=94.06 Aligned_cols=143 Identities=13% Similarity=0.071 Sum_probs=80.0
Q ss_pred CceeEeeEEEeccCCCceEEEEEEeccC---CCCCCCEEEEECCCCCchhhhhh-hhccCCCCccCCCcccccCCCcccC
Q 012861 40 SFQQYAGYITIDEKQQRALFYYFVEAAT---EAASKPLVLWLNGGPGCSSIGAG-AFCEHGPFKPSGDTLLRNEYSWNKE 115 (455)
Q Consensus 40 ~~~~~sGyl~v~~~~~~~lfy~~~es~~---~~~~~Pl~~wlnGGPG~ss~~~g-~f~E~GP~~~~~~~l~~n~~sw~~~ 115 (455)
++...+|. .+ .+..++|.-+.... +.++.|.||.++|++|.+..+.. .+.+ ..+ .....--.+.
T Consensus 38 ~~~~~~~~-~~---~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~---~l~-----~~~~~l~~~~ 105 (360)
T PRK06489 38 DFTFHSGE-TL---PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAG---ELF-----GPGQPLDASK 105 (360)
T ss_pred ceeccCCC-Cc---CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHH---Hhc-----CCCCcccccC
Confidence 45556675 33 34567775332110 12236889999999987666400 0100 000 0000001355
Q ss_pred CceEEEecCCccccCCccCCC---CccccChHHHHHHHHHHHHHHHHHCCCCCCCcE-EEEeeccccccHHHHHHHHHHh
Q 012861 116 ANMLYLESPAGVGFSYSANKS---FYGSVNDAIAARDNLAFLEGWYEKFPEYKNREF-FITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 116 an~l~iDqPvG~GfSy~~~~~---~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvP~lA~~i~~~ 191 (455)
.++|.+|.| |.|.|...... .....+-++.++++..++.. ++.-.++ +|+|+|+||..+-.+|.+-.+
T Consensus 106 ~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~P~- 177 (360)
T PRK06489 106 YFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKYPD- 177 (360)
T ss_pred CEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhCch-
Confidence 799999999 99998643211 00011334455555554432 1222355 589999999988888877665
Q ss_pred cccCCceeeEecCCC
Q 012861 192 NMKLNLKGIAIGNPL 206 (455)
Q Consensus 192 n~~inLkGi~IGng~ 206 (455)
.++++++.++.
T Consensus 178 ----~V~~LVLi~s~ 188 (360)
T PRK06489 178 ----FMDALMPMASQ 188 (360)
T ss_pred ----hhheeeeeccC
Confidence 38888887764
No 32
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.95 E-value=1.9e-07 Score=91.47 Aligned_cols=126 Identities=18% Similarity=0.290 Sum_probs=80.8
Q ss_pred eeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEec
Q 012861 45 AGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLES 123 (455)
Q Consensus 45 sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDq 123 (455)
.+|+.+. .+..++|.-. ..+. .|-||+++||||.++.. ... ..|. +..+++.+|+
T Consensus 6 ~~~~~~~--~~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~-----------------~~~~~~~~~vi~~D~ 61 (306)
T TIGR01249 6 SGYLNVS--DNHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCR-----------------RFFDPETYRIVLFDQ 61 (306)
T ss_pred CCeEEcC--CCcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHH-----------------hccCccCCEEEEECC
Confidence 4788885 3567877542 2223 34578899999976643 111 1121 4578999999
Q ss_pred CCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEec
Q 012861 124 PAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (455)
Q Consensus 124 PvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IG 203 (455)
| |.|.|..... .+. .+.++.++++..+++ .. ...+++++|+||||..+..+|.+-.+ .++++++.
T Consensus 62 ~-G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-----~v~~lvl~ 126 (306)
T TIGR01249 62 R-GCGKSTPHAC-LEE-NTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE-----VVTGLVLR 126 (306)
T ss_pred C-CCCCCCCCCC-ccc-CCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH-----hhhhheee
Confidence 9 9999974322 111 133444555544443 22 24579999999999988888876555 47899988
Q ss_pred CCCCCc
Q 012861 204 NPLLEF 209 (455)
Q Consensus 204 ng~~dp 209 (455)
+..+.+
T Consensus 127 ~~~~~~ 132 (306)
T TIGR01249 127 GIFLLR 132 (306)
T ss_pred ccccCC
Confidence 876653
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=98.95 E-value=6.9e-08 Score=95.76 Aligned_cols=125 Identities=15% Similarity=0.094 Sum_probs=80.6
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc-ccCCceEEEecCCccccCCc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYS 132 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw-~~~an~l~iDqPvG~GfSy~ 132 (455)
.+..++|+.+... ..+|+||.++|-.+.+..+ .-+. ..+ .+..+++-+|.| |.|.|..
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y-~~~~----------------~~l~~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVKY-AELA----------------YDLFHLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHHH-HHHH----------------HHHHHCCCeEEEEcCC-CCCCCCC
Confidence 3567888766532 3468999999986655444 2110 011 245789999999 9999863
Q ss_pred cCCC---CccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 133 ANKS---FYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 133 ~~~~---~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
.... .... +-+..++|+..+++...+.++ ..+++++|+|+||..+-.+|.+-.+ .++|+++.+|...
T Consensus 98 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~p~-----~v~~lvl~~p~~~ 167 (330)
T PRK10749 98 LLDDPHRGHVE-RFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRHPG-----VFDAIALCAPMFG 167 (330)
T ss_pred CCCCCCcCccc-cHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhCCC-----CcceEEEECchhc
Confidence 2211 0101 334556677777776544433 5789999999999877766654322 4789999988754
No 34
>PLN02965 Probable pheophorbidase
Probab=98.94 E-value=2.4e-08 Score=95.18 Aligned_cols=100 Identities=11% Similarity=0.116 Sum_probs=68.5
Q ss_pred EEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc-ccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHH
Q 012861 75 VLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAF 153 (455)
Q Consensus 75 ~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw-~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~f 153 (455)
||.++|.++.+..+ -.. -... .+...++-+|.| |.|.|-......+ +-+..|+|+.++
T Consensus 6 vvllHG~~~~~~~w-~~~----------------~~~L~~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~dl~~~ 64 (255)
T PLN02965 6 FVFVHGASHGAWCW-YKL----------------ATLLDAAGFKSTCVDLT-GAGISLTDSNTVS---SSDQYNRPLFAL 64 (255)
T ss_pred EEEECCCCCCcCcH-HHH----------------HHHHhhCCceEEEecCC-cCCCCCCCccccC---CHHHHHHHHHHH
Confidence 88899998766665 111 0112 234689999999 9999954322222 445566677666
Q ss_pred HHHHHHHCCCCCC-CcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 154 LEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 154 L~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
|.. +.. ++++|.|+|+||..+..+|.+..+ .++++++.++..
T Consensus 65 l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~-----~v~~lvl~~~~~ 107 (255)
T PLN02965 65 LSD-------LPPDHKVILVGHSIGGGSVTEALCKFTD-----KISMAIYVAAAM 107 (255)
T ss_pred HHh-------cCCCCCEEEEecCcchHHHHHHHHhCch-----heeEEEEEcccc
Confidence 653 222 589999999999999888876555 478999888753
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.92 E-value=1.6e-08 Score=94.08 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=63.9
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~ 151 (455)
.|.||+++|.++.+..+ -.+. . ...+..+++.+|.| |.|.|.... .+ +-++.++++.
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~--------------~--~l~~~~~vi~~d~~-G~G~s~~~~--~~---~~~~~~~~~~ 60 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLD--------------E--ELSAHFTLHLVDLP-GHGRSRGFG--PL---SLADAAEAIA 60 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHH--------------H--hhccCeEEEEecCC-cCccCCCCC--Cc---CHHHHHHHHH
Confidence 47899999987777665 2221 1 11235799999998 989875322 11 3333333332
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 152 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
.. . ..++++.|+|+||..+..+|.+-.+ .++++++.++..
T Consensus 61 ~~-------~----~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 100 (245)
T TIGR01738 61 AQ-------A----PDPAIWLGWSLGGLVALHIAATHPD-----RVRALVTVASSP 100 (245)
T ss_pred Hh-------C----CCCeEEEEEcHHHHHHHHHHHHCHH-----hhheeeEecCCc
Confidence 21 1 2589999999999998888876555 378988877653
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.91 E-value=1.3e-07 Score=95.73 Aligned_cols=126 Identities=22% Similarity=0.226 Sum_probs=82.6
Q ss_pred CceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCccccCCcc
Q 012861 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 55 ~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~GfSy~~ 133 (455)
+..+|++.++... .+.+|+||+++|.++.+..+ -.+. ..+. +..+++-+|.| |.|.|...
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~-~~~a----------------~~L~~~Gy~V~~~D~r-GhG~S~~~ 180 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRY-LHFA----------------KQLTSCGFGVYAMDWI-GHGGSDGL 180 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHH-HHHH----------------HHHHHCCCEEEEeCCC-CCCCCCCC
Confidence 4567776665432 33468999999998776654 2221 1122 35689999999 99988653
Q ss_pred CCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 134 ~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
. .+.. +.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|.+ ....-.++|+++.+|++.
T Consensus 181 ~--~~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~---p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 181 H--GYVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY---PSIEDKLEGIVLTSPALR 246 (395)
T ss_pred C--CCCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc---cCcccccceEEEECcccc
Confidence 2 2222 444556777777776665555 3589999999999877655431 110124889999988864
No 37
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.90 E-value=2.4e-08 Score=93.87 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=70.3
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~ 151 (455)
.|.||+++|.||++..+ -.+. ... +..+++.+|.| |.|.|..... . +-+..++++.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~--------------~~l---~~~~vi~~D~~-G~G~S~~~~~----~-~~~~~~~~l~ 57 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG--------------EAL---PDYPRLYIDLP-GHGGSAAISV----D-GFADVSRLLS 57 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH--------------HHc---CCCCEEEecCC-CCCCCCCccc----c-CHHHHHHHHH
Confidence 58899999999998887 3321 112 34899999988 9998864221 1 3445566666
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 152 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
++|+. +...+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 58 ~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~----~v~~lvl~~~~ 101 (242)
T PRK11126 58 QTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG----GLCGLIVEGGN 101 (242)
T ss_pred HHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc----cccEEEEeCCC
Confidence 66652 3356999999999999888888764321 28888887754
No 38
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.89 E-value=5.9e-07 Score=92.65 Aligned_cols=141 Identities=16% Similarity=0.172 Sum_probs=88.4
Q ss_pred CCCCCCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhh-hccCCCCccCCCcccccCCCc
Q 012861 34 PGQPQASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGA-FCEHGPFKPSGDTLLRNEYSW 112 (455)
Q Consensus 34 p~~~~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~-f~E~GP~~~~~~~l~~n~~sw 112 (455)
|-|.+...+.-.-|++. ++..+||+...... ....|.||+++|.+|.+..+ .. +.+ .+ ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~---~~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W-~~~~~~---------~L---~~~~ 229 (481)
T PLN03087 167 PRWSDCDCKFCTSWLSS---SNESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFW-TETLFP---------NF---SDAA 229 (481)
T ss_pred CcccccccceeeeeEee---CCeEEEEEEecCCC-CCCCCeEEEECCCCccHHHH-HHHHHH---------HH---HHHh
Confidence 33444445556678876 34678887655432 22347899999999988876 31 000 00 0123
Q ss_pred ccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhc
Q 012861 113 NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN 192 (455)
Q Consensus 113 ~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 192 (455)
.+...++.+|.| |.|.|-......| +-++.++++. +.+.+. +...+++|.|+|+||..+-.+|.+-.+
T Consensus 230 ~~~yrVia~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe-- 297 (481)
T PLN03087 230 KSTYRLFAVDLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG-- 297 (481)
T ss_pred hCCCEEEEECCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH--
Confidence 456789999999 9998854322223 3333344442 123333 334689999999999999888876555
Q ss_pred ccCCceeeEecCCC
Q 012861 193 MKLNLKGIAIGNPL 206 (455)
Q Consensus 193 ~~inLkGi~IGng~ 206 (455)
.++++++.++-
T Consensus 298 ---~V~~LVLi~~~ 308 (481)
T PLN03087 298 ---AVKSLTLLAPP 308 (481)
T ss_pred ---hccEEEEECCC
Confidence 48899988863
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.84 E-value=5.3e-08 Score=90.54 Aligned_cols=105 Identities=22% Similarity=0.265 Sum_probs=69.5
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~ 151 (455)
.|.||.++|.+|.+..+ -.+. ...+ +..+++.+|.| |.|.|....... ..+-++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~--------------~~L~--~~~~v~~~d~~-g~G~s~~~~~~~--~~~~~~~~~~~- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALI--------------ELLG--PHFRCLAIDLP-GHGSSQSPDEIE--RYDFEEAAQDI- 59 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHH--------------HHhc--ccCeEEEEcCC-CCCCCCCCCccC--hhhHHHHHHHH-
Confidence 48899999999888776 2221 1122 45789999988 999885432111 11333344442
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 152 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+..+.+.. ..++++|.|+|+||..+..+|.+..+ .++++++.++..
T Consensus 60 --~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~-----~v~~lil~~~~~ 105 (251)
T TIGR03695 60 --LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE-----RVQGLILESGSP 105 (251)
T ss_pred --HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch-----heeeeEEecCCC
Confidence 33333333 35789999999999999988886554 488999888754
No 40
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.83 E-value=2.1e-07 Score=89.09 Aligned_cols=123 Identities=20% Similarity=0.247 Sum_probs=87.5
Q ss_pred ceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhh---hhhhccCCCCccCCCcccccCCCcccCCc
Q 012861 41 FQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIG---AGAFCEHGPFKPSGDTLLRNEYSWNKEAN 117 (455)
Q Consensus 41 ~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~---~g~f~E~GP~~~~~~~l~~n~~sw~~~an 117 (455)
....-+|++++ + +++++.|. .+++.|+++.|+|=|=.+=.+ +..|. .....
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~~~la-------------------~~~~r 73 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQIPGLA-------------------SRGYR 73 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhhhhhh-------------------hcceE
Confidence 35667888882 3 77888776 678899999999998644443 01110 12267
Q ss_pred eEEEecCCccccCCccCC-CCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCC
Q 012861 118 MLYLESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLN 196 (455)
Q Consensus 118 ~l~iDqPvG~GfSy~~~~-~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~in 196 (455)
++.+|.+ |-|+|..... ..| +-...+.|+..+|. .+.....++.|++||+.-+=.+|....+.
T Consensus 74 viA~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Per----- 137 (322)
T KOG4178|consen 74 VIAPDLR-GYGFSDAPPHISEY---TIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPER----- 137 (322)
T ss_pred EEecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhh-----
Confidence 8999999 9999987665 445 44555667777776 34467899999999999988888887774
Q ss_pred ceeeEecCC
Q 012861 197 LKGIAIGNP 205 (455)
Q Consensus 197 LkGi~IGng 205 (455)
++|++..|.
T Consensus 138 v~~lv~~nv 146 (322)
T KOG4178|consen 138 VDGLVTLNV 146 (322)
T ss_pred cceEEEecC
Confidence 555555543
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.76 E-value=4e-07 Score=90.79 Aligned_cols=76 Identities=16% Similarity=0.067 Sum_probs=55.1
Q ss_pred cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccccccHHHHHHHHHHhc
Q 012861 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSN 192 (455)
Q Consensus 114 ~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n 192 (455)
+...+|.+|.| |.|-|. . ..+ +.+..|+++.++|+. +.- +.+.|+|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~~---~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~-- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VPI---DTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPA-- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CCC---CHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChH--
Confidence 56889999999 777553 2 222 344567787777764 222 346799999999999999987766
Q ss_pred ccCCceeeEecCCCCC
Q 012861 193 MKLNLKGIAIGNPLLE 208 (455)
Q Consensus 193 ~~inLkGi~IGng~~d 208 (455)
.++++++.++...
T Consensus 162 ---~V~~LvLi~s~~~ 174 (343)
T PRK08775 162 ---RVRTLVVVSGAHR 174 (343)
T ss_pred ---hhheEEEECcccc
Confidence 3899999987643
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.68 E-value=2.7e-06 Score=84.37 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=85.0
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhh---ccC----CCCccCCCcc-ccc---CCCc-ccCCceEEE
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAF---CEH----GPFKPSGDTL-LRN---EYSW-NKEANMLYL 121 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f---~E~----GP~~~~~~~l-~~n---~~sw-~~~an~l~i 121 (455)
.+..++++..+.. ..+.+|+.++|==+-+.. -.+ .|. +|+.|++..- .++ -... .+-.+|+-+
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe
Confidence 3556777665543 235799999976333321 111 010 1222221100 000 0122 246789999
Q ss_pred ecCCccccCCccCC-CCccccChHHHHHHHHHHHHHHHHHC----------------CCCC-CCcEEEEeeccccccHHH
Q 012861 122 ESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKF----------------PEYK-NREFFITGESYAGHYVPQ 183 (455)
Q Consensus 122 DqPvG~GfSy~~~~-~~~~~~~d~~~a~~~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~yvP~ 183 (455)
|.| |.|.|.+.+. ..+.. +-++.++|+..+++...+.. .++. +.|++|.|+|.||..+..
T Consensus 81 D~r-GHG~S~~~~~~~g~~~-~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 81 DLQ-GHGESDGLQNLRGHIN-CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ccc-ccCCCccccccccchh-hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 998 9999976432 11111 34556778888887654310 0222 679999999999998877
Q ss_pred HHHHHHHhc---ccCCceeeEecCCCCCc
Q 012861 184 LAQLIIQSN---MKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 184 lA~~i~~~n---~~inLkGi~IGng~~dp 209 (455)
++..+.+.. +...++|+++.+|++..
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEE
Confidence 776553321 12468999988888643
No 43
>PRK07581 hypothetical protein; Validated
Probab=98.66 E-value=2.1e-06 Score=85.35 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=50.4
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcC-CccccccCCcHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRG-ASHEAPLSQPRR 438 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~-AGHmvP~dqP~~ 438 (455)
-.++||+..|+.|.++|....+.+.+.+ .+ .++..|.+ +||+++.+||+.
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccCcHH
Confidence 3689999999999999988777665522 13 56688998 999999999999
Q ss_pred HHHHHHHHHc
Q 012861 439 SLALFNAFLG 448 (455)
Q Consensus 439 a~~m~~~fl~ 448 (455)
...++++|+.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999985
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.64 E-value=2.3e-06 Score=100.90 Aligned_cols=108 Identities=18% Similarity=0.155 Sum_probs=73.8
Q ss_pred CCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCC-----CCccccC
Q 012861 68 EAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANK-----SFYGSVN 142 (455)
Q Consensus 68 ~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~-----~~~~~~~ 142 (455)
+.++.|.||+|||.+|++..+ -.+.+ ...+..+++.+|.| |.|.|..... ... ..+
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w-~~~~~----------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~-~~s 1427 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDW-IPIMK----------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEP-TLS 1427 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHH-HHHHH----------------HHhCCCEEEEEcCC-CCCCCCCccccccccccc-cCC
Confidence 345578999999999998886 22211 12344789999999 9998864321 001 113
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 143 d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
-+..++++..+++. +...+++|+|+|+||..+-.+|.+..+ .++++++.+|.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~-----~V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD-----KIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH-----hhCEEEEECCC
Confidence 44556666666552 334689999999999999888876555 48888887764
No 45
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.60 E-value=5.2e-07 Score=96.87 Aligned_cols=133 Identities=17% Similarity=0.227 Sum_probs=81.9
Q ss_pred CCceEEEEEEeccC-CCCC-CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCC-cccCCceEEEecCCccccC
Q 012861 54 QQRALFYYFVEAAT-EAAS-KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYS-WNKEANMLYLESPAGVGFS 130 (455)
Q Consensus 54 ~~~~lfy~~~es~~-~~~~-~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~s-w~~~an~l~iDqPvG~GfS 130 (455)
.+..+..|+..-.+ ++.+ -|+|++++||| +++. |. ....+... +.+-+.||+++..--+||+
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~-~~------------~~~~~~q~~~~~G~~V~~~n~RGS~GyG 438 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQV-GY------------SFNPEIQVLASAGYAVLAPNYRGSTGYG 438 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--cccc-cc------------ccchhhHHHhcCCeEEEEeCCCCCCccH
Confidence 46688888876543 4433 59999999999 5554 30 01112222 2467889999966555654
Q ss_pred CccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 131 YSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 131 y~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
..=.........+ ...+|+.++++ |+++.|......+.|+|.||||...-.++.+-.. ++..+...|.++.
T Consensus 439 ~~F~~~~~~~~g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~------f~a~~~~~~~~~~ 509 (620)
T COG1506 439 REFADAIRGDWGG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR------FKAAVAVAGGVDW 509 (620)
T ss_pred HHHHHhhhhccCC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCch------hheEEeccCcchh
Confidence 4211111100011 22458888998 9999999888899999999999876655543322 5555555544433
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.51 E-value=2.1e-05 Score=79.53 Aligned_cols=65 Identities=34% Similarity=0.408 Sum_probs=51.9
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEc-CCccccccCCcHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIR-GASHEAPLSQPRRS 439 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~-~AGHmvP~dqP~~a 439 (455)
.+++||..|+.|.++|....+...+.+... + .+ .+++.|. ++||+.+.++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a-~-----------------------~~-~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA-G-----------------------AD-VSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc-C-----------------------CC-eEEEEeCCCCCchhHhcCHHHH
Confidence 689999999999999988777666644310 0 02 4677785 89999999999999
Q ss_pred HHHHHHHHcCC
Q 012861 440 LALFNAFLGGK 450 (455)
Q Consensus 440 ~~m~~~fl~~~ 450 (455)
.+.+.+|+...
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 99999999753
No 47
>PLN02511 hydrolase
Probab=98.49 E-value=4.2e-06 Score=84.90 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=80.0
Q ss_pred eeEEEeccCCCceEEE-EEEe-ccCCCCCCCEEEEECCCCCchhh-hh-hhhccCCCCccCCCcccccCCCcccCCceEE
Q 012861 45 AGYITIDEKQQRALFY-YFVE-AATEAASKPLVLWLNGGPGCSSI-GA-GAFCEHGPFKPSGDTLLRNEYSWNKEANMLY 120 (455)
Q Consensus 45 sGyl~v~~~~~~~lfy-~~~e-s~~~~~~~Pl~~wlnGGPG~ss~-~~-g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~ 120 (455)
--++...+ +..+.+ |+.. ....+.+.|+||.|+|..|+|.. ++ .+. .....+..+++-
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~----------------~~~~~~g~~vv~ 134 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML----------------LRARSKGWRVVV 134 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH----------------HHHHHCCCEEEE
Confidence 34566543 345655 4432 12235678999999999998743 21 111 011135678999
Q ss_pred EecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceee
Q 012861 121 LESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGI 200 (455)
Q Consensus 121 iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi 200 (455)
+|.| |.|-|.......+. ...++|+..+++..-.++| +.+++++|+|.||..+-.++.+- .....|++.
T Consensus 135 ~d~r-G~G~s~~~~~~~~~----~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~~---~~~~~v~~~ 203 (388)
T PLN02511 135 FNSR-GCADSPVTTPQFYS----ASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGEE---GENCPLSGA 203 (388)
T ss_pred EecC-CCCCCCCCCcCEEc----CCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHhc---CCCCCceEE
Confidence 9999 88888643332221 1224466666666555666 56899999999998765555432 222447776
Q ss_pred EecCCCCC
Q 012861 201 AIGNPLLE 208 (455)
Q Consensus 201 ~IGng~~d 208 (455)
++.++-.+
T Consensus 204 v~is~p~~ 211 (388)
T PLN02511 204 VSLCNPFD 211 (388)
T ss_pred EEECCCcC
Confidence 65543334
No 48
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.42 E-value=7.1e-07 Score=87.96 Aligned_cols=132 Identities=20% Similarity=0.266 Sum_probs=84.4
Q ss_pred eEEEEEEec--cCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccC
Q 012861 57 ALFYYFVEA--ATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (455)
Q Consensus 57 ~lfy~~~es--~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~ 134 (455)
.-.||++++ +.+|++||+||+++|| |.+.+.=|..+..- .+-+...+...+|.+|-.+-. -...
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~L---~~i~~~l~~~SILvLDYsLt~---~~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEFL---LNIYKLLPEVSILVLDYSLTS---SDEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHHH---HHHHHHcCCCeEEEEeccccc---cccC
Confidence 346899985 3468889999999999 66666667665310 011111123399999955322 0012
Q ss_pred CCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 135 ~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
...|++ .-.+. ++..+...+. -...++.|+|+|-||+.+-.+..++.+.++.+-=+++++.+||+++.
T Consensus 171 ~~~yPt-QL~ql----v~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 171 GHKYPT-QLRQL----VATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCcCch-HHHHH----HHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 234443 22222 2222322222 23568999999999999999999988866544448999999999996
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.38 E-value=7.3e-07 Score=82.44 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=53.1
Q ss_pred ceEEEecCCccccCCc---cCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc
Q 012861 117 NMLYLESPAGVGFSYS---ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (455)
Q Consensus 117 n~l~iDqPvG~GfSy~---~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 193 (455)
+|+-+|+| |+|+|.. .....+ +. .++.+.+..+.++.+ ..++++.|+||||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~~~~~---~~----~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~--- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPDFPDY---TT----DDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE--- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSGSCTH---CH----HHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG---
T ss_pred EEEEEeCC-CCCCCCCCccCCcccc---cH----HHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch---
Confidence 68899988 9999984 222222 23 344555555555554 3459999999999988888876666
Q ss_pred cCCceeeEecCCCC
Q 012861 194 KLNLKGIAIGNPLL 207 (455)
Q Consensus 194 ~inLkGi~IGng~~ 207 (455)
.++++++.++..
T Consensus 68 --~v~~lvl~~~~~ 79 (230)
T PF00561_consen 68 --RVKKLVLISPPP 79 (230)
T ss_dssp --GEEEEEEESESS
T ss_pred --hhcCcEEEeeec
Confidence 589999888764
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.36 E-value=1.1e-05 Score=79.70 Aligned_cols=60 Identities=28% Similarity=0.493 Sum_probs=50.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
+.+|||..|+.|.++|....+...+ +. .| ..+..|.+|||.+..++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~----~~------------------------pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKK----KL------------------------PN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHh----hC------------------------CC-ceEEEeCCCCcccccCCHHHHH
Confidence 4889999999999999884444433 11 26 8899999999999999999999
Q ss_pred HHHHHHHcC
Q 012861 441 ALFNAFLGG 449 (455)
Q Consensus 441 ~m~~~fl~~ 449 (455)
..+..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999965
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.33 E-value=1e-05 Score=78.90 Aligned_cols=136 Identities=20% Similarity=0.167 Sum_probs=91.1
Q ss_pred eeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc-ccCCceEE
Q 012861 42 QQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLY 120 (455)
Q Consensus 42 ~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw-~~~an~l~ 120 (455)
....|+.... .+..++|+-++...++. .+|++++|.=..+.-+ --+. +-+ ..-..++-
T Consensus 8 ~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry-~~la----------------~~l~~~G~~V~~ 66 (298)
T COG2267 8 TRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRY-EELA----------------DDLAARGFDVYA 66 (298)
T ss_pred ccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHHH-HHHH----------------HHHHhCCCEEEE
Confidence 3445566542 45789998887765544 8999999997666664 2210 111 24568999
Q ss_pred EecCCccccCC-ccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCcee
Q 012861 121 LESPAGVGFSY-SANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKG 199 (455)
Q Consensus 121 iDqPvG~GfSy-~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkG 199 (455)
+|+| |.|.|. +... ... +-++...|+..|++..-...| ..|++|+|+|.||-.+...+..... .++|
T Consensus 67 ~D~R-GhG~S~r~~rg--~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~~-----~i~~ 134 (298)
T COG2267 67 LDLR-GHGRSPRGQRG--HVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYPP-----RIDG 134 (298)
T ss_pred ecCC-CCCCCCCCCcC--Cch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCCc-----cccE
Confidence 9999 999997 3322 111 223334455555555444333 6799999999999988777765553 6999
Q ss_pred eEecCCCCCcc
Q 012861 200 IAIGNPLLEFN 210 (455)
Q Consensus 200 i~IGng~~dp~ 210 (455)
++|-+|++...
T Consensus 135 ~vLssP~~~l~ 145 (298)
T COG2267 135 LVLSSPALGLG 145 (298)
T ss_pred EEEECccccCC
Confidence 99999998875
No 52
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.30 E-value=0.00022 Score=71.35 Aligned_cols=64 Identities=23% Similarity=0.305 Sum_probs=50.3
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEc-CCccccccCCcHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIR-GASHEAPLSQPRR 438 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~-~AGHmvP~dqP~~ 438 (455)
-.+++|++.|+.|.++|....+...+.+... .. . .+|+.|. ++||+++.++|+.
T Consensus 287 I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-------~~-----------------~-v~~~~i~~~~GH~~~le~p~~ 341 (351)
T TIGR01392 287 IKAPFLVVSITSDWLFPPAESRELAKALPAA-------GL-----------------R-VTYVEIESPYGHDAFLVETDQ 341 (351)
T ss_pred CCCCEEEEEeCCccccCHHHHHHHHHHHhhc-------CC-----------------c-eEEEEeCCCCCcchhhcCHHH
Confidence 3689999999999999988887776644310 00 1 4556664 8999999999999
Q ss_pred HHHHHHHHHc
Q 012861 439 SLALFNAFLG 448 (455)
Q Consensus 439 a~~m~~~fl~ 448 (455)
..+.+.+|++
T Consensus 342 ~~~~l~~FL~ 351 (351)
T TIGR01392 342 VEELIRGFLR 351 (351)
T ss_pred HHHHHHHHhC
Confidence 9999999984
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.24 E-value=0.00013 Score=70.33 Aligned_cols=79 Identities=22% Similarity=0.208 Sum_probs=54.6
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 194 (455)
-.+++-+|.| |.|-|..... +-+...+|+.++++.+-+..|.+ .++.++|+|.||..+-.+|.. .
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~~------~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~--~---- 121 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGENL------GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA--D---- 121 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCCC------CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh--C----
Confidence 4789999999 9998864321 22334567777777655555543 369999999999766555432 1
Q ss_pred CCceeeEecCCCCC
Q 012861 195 LNLKGIAIGNPLLE 208 (455)
Q Consensus 195 inLkGi~IGng~~d 208 (455)
-.++|+++.||++.
T Consensus 122 ~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 LRVAGLVLLNPWVR 135 (274)
T ss_pred CCccEEEEECCccC
Confidence 15999999999854
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=98.22 E-value=4.4e-05 Score=81.39 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=66.1
Q ss_pred CceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccC
Q 012861 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (455)
Q Consensus 55 ~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~ 134 (455)
+..+.|+-+. +.+.|.||.++|.++.+..+ .-+.+ -+.+...++.+|.| |.|.|....
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w-~~~~~----------------~L~~~~~Vi~~D~~-G~G~S~~~~ 69 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVW-DGVAP----------------LLADRFRVVAYDVR-GAGRSSAPK 69 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHH-HHHHH----------------HhhcceEEEEecCC-CCCCCCCCC
Confidence 4567776432 23479999999998877775 33211 12345789999999 999997533
Q ss_pred C-CCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHH
Q 012861 135 K-SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (455)
Q Consensus 135 ~-~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 185 (455)
. ..+ +-+..++|+..+++.. - ..+|++|+|+|+||..+-.++
T Consensus 70 ~~~~~---~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 70 RTAAY---TLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred ccccc---CHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHHHHHH
Confidence 2 222 4556677888777742 1 135799999999995544333
No 55
>PRK10985 putative hydrolase; Provisional
Probab=98.10 E-value=0.0004 Score=68.68 Aligned_cols=134 Identities=18% Similarity=0.168 Sum_probs=70.1
Q ss_pred EEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhh-h-hhhccCCCCccCCCcccccCCCcccCCceEEEecC
Q 012861 47 YITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIG-A-GAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESP 124 (455)
Q Consensus 47 yl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~-~-g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqP 124 (455)
.++..+ +..+.+++.+....+.++|+||.++|.+|++... + .+. + .+ . .+-.+++-+|.+
T Consensus 35 ~~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~-~---------~l--~----~~G~~v~~~d~r 96 (324)
T PRK10985 35 RLELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL-E---------AA--Q----KRGWLGVVMHFR 96 (324)
T ss_pred EEECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH-H---------HH--H----HCCCEEEEEeCC
Confidence 355543 3455544433333345689999999999975431 0 111 0 00 1 123568888988
Q ss_pred CccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecC
Q 012861 125 AGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (455)
Q Consensus 125 vG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGn 204 (455)
|.|-|-......+.. .. .+|+..+++...+++| ..+++++|+|+||..+-..+.+-.+ +..++++++.+
T Consensus 97 -G~g~~~~~~~~~~~~-~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~---~~~~~~~v~i~ 165 (324)
T PRK10985 97 -GCSGEPNRLHRIYHS-GE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD---DLPLDAAVIVS 165 (324)
T ss_pred -CCCCCccCCcceECC-Cc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC---CCCccEEEEEc
Confidence 776443221222211 11 2344444433223444 4689999999999866544443221 22366666655
Q ss_pred CCCCc
Q 012861 205 PLLEF 209 (455)
Q Consensus 205 g~~dp 209 (455)
+-.+.
T Consensus 166 ~p~~~ 170 (324)
T PRK10985 166 APLML 170 (324)
T ss_pred CCCCH
Confidence 54443
No 56
>PLN02872 triacylglycerol lipase
Probab=98.01 E-value=4.3e-05 Score=77.34 Aligned_cols=139 Identities=17% Similarity=0.093 Sum_probs=75.8
Q ss_pred CCCceecCCCCC-------CCCceeEeeEEEeccCCCceEEEEEEeccC---CCCCCCEEEEECCCCCchhhhhhhhccC
Q 012861 26 QADKIISLPGQP-------QASFQQYAGYITIDEKQQRALFYYFVEAAT---EAASKPLVLWLNGGPGCSSIGAGAFCEH 95 (455)
Q Consensus 26 ~~~~v~~lp~~~-------~~~~~~~sGyl~v~~~~~~~lfy~~~es~~---~~~~~Pl~~wlnGGPG~ss~~~g~f~E~ 95 (455)
.+.....-|.+. ..+++...-+++..| |-.|-.+-..... .+..+|.|+.++|..++|..+ ..-
T Consensus 20 ~~~~~~~~~~~t~~~~~i~~~gy~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w-~~~--- 93 (395)
T PLN02872 20 QSNLLRRSPVESLCAQLIHPAGYSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAW-FLN--- 93 (395)
T ss_pred ccccccCCCchhhHHHHHHHcCCCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccce-eec---
Confidence 344555555543 224555566666643 2233333333221 234578999999998888776 221
Q ss_pred CCCccCCCcccccCCCc-ccCCceEEEecCCccccCCccCC-----CCccccChHHHH-HHHHHHHHHHHHHCCCCCCCc
Q 012861 96 GPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYSANK-----SFYGSVNDAIAA-RDNLAFLEGWYEKFPEYKNRE 168 (455)
Q Consensus 96 GP~~~~~~~l~~n~~sw-~~~an~l~iDqPvG~GfSy~~~~-----~~~~~~~d~~~a-~~~~~fL~~f~~~fp~~~~~~ 168 (455)
+|..- + .+-. .+-.++.-.|.. |.|+|+.... ..+...+-++.| .|+-++++...+.- ..+
T Consensus 94 ~~~~s----l---a~~La~~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~ 161 (395)
T PLN02872 94 SPEQS----L---GFILADHGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSK 161 (395)
T ss_pred Ccccc----h---HHHHHhCCCCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCc
Confidence 22100 0 0001 223577778877 8888864221 112111333344 67777777655432 358
Q ss_pred EEEEeeccccccHH
Q 012861 169 FFITGESYAGHYVP 182 (455)
Q Consensus 169 ~yi~GESYgG~yvP 182 (455)
+++.|+|.||..+-
T Consensus 162 v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 162 IFIVGHSQGTIMSL 175 (395)
T ss_pred eEEEEECHHHHHHH
Confidence 99999999997554
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.96 E-value=0.00054 Score=65.11 Aligned_cols=129 Identities=19% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCcc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~ 133 (455)
.+..+|.-......+++-+-+|+.++|.-+-||-.+--+.. .+ +. .-.-+--+|++ |.|.|.+-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~---------~l--~~----~g~~v~a~D~~-GhG~SdGl 99 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK---------RL--AK----SGFAVYAIDYE-GHGRSDGL 99 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH---------HH--Hh----CCCeEEEeecc-CCCcCCCC
Confidence 35688875444444446688999999986665432111100 00 11 12336679999 99999743
Q ss_pred CCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 134 ~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
..|.. +-+.+..|...|+..+-. ..++++.|.|++|||.||--+-.++.+ +. --..|+++..|+.
T Consensus 100 --~~yi~-~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p---~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 100 --HAYVP-SFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK--DP---NFWDGAILVAPMC 164 (313)
T ss_pred --cccCC-cHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh--CC---cccccceeeeccc
Confidence 34544 556667777777776443 457888999999999999877776655 21 1367888777764
No 58
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.95 E-value=0.00023 Score=65.65 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=61.6
Q ss_pred ccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhc
Q 012861 113 NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN 192 (455)
Q Consensus 113 ~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 192 (455)
.+-..|+.+|.+.+.||+..-....... .-....+|+..+++...++. ......+.|+|.||||+.+-.++.+-.+
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~~-- 87 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHPD-- 87 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTCC--
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccce--
Confidence 3567899999997787776422221111 23344667777777655544 5566789999999999988877763322
Q ss_pred ccCCceeeEecCCCCCcccc
Q 012861 193 MKLNLKGIAIGNPLLEFNTD 212 (455)
Q Consensus 193 ~~inLkGi~IGng~~dp~~~ 212 (455)
.++.++.++|++|+...
T Consensus 88 ---~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 88 ---RFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ---GSSEEEEESE-SSTTCS
T ss_pred ---eeeeeeccceecchhcc
Confidence 37899999999888553
No 59
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.83 E-value=6.3e-05 Score=72.50 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=70.1
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
.+.|.||+++|..+.++.+ ..+.+ .|. .+..+++.+|.| |.|.|.......+ +-++.+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~~---------~L~------~~g~~vi~~dl~-g~G~s~~~~~~~~---~~~~~~~~ 75 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIRC---------LME------NSGYKVTCIDLK-SAGIDQSDADSVT---TFDEYNKP 75 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHHH---------HHH------hCCCEEEEeccc-CCCCCCCCcccCC---CHHHHHHH
Confidence 5679999999998877776 22200 000 024689999999 9998753322111 44444555
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+.++|+ ... ...+++|.|+||||..+..++.+..+ .++++++.++..
T Consensus 76 l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~-----~v~~lv~~~~~~ 122 (273)
T PLN02211 76 LIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFPK-----KICLAVYVAATM 122 (273)
T ss_pred HHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhChh-----heeEEEEecccc
Confidence 555554 322 14689999999999988888765544 488888887653
No 60
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.81 E-value=0.00039 Score=65.78 Aligned_cols=187 Identities=17% Similarity=0.174 Sum_probs=105.3
Q ss_pred cchhHHHHHHHHHHHHHHhhccCCCCCceecCCCCCCCCceeEeeEEEeccCCCceEEEEEEeccCCCCCCCEEEEECCC
Q 012861 2 GLKQWIIIVSALFCTTILTAKSVPQADKIISLPGQPQASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGG 81 (455)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGG 81 (455)
.+.++.+++.++ .+++.+..++..+....+++... +-+.+ ++...-||++.-...++..||+|.|+|+
T Consensus 3 ~~~~~~R~~~~l--~~la~~~~~~sg~~~~a~~~~~~-------~s~~~---~g~~r~y~l~vP~g~~~~apLvv~LHG~ 70 (312)
T COG3509 3 TLGRLARLVLLL--AVLAVAAAACSGHAALARFGSSV-------ASFDV---NGLKRSYRLYVPPGLPSGAPLVVVLHGS 70 (312)
T ss_pred ccchhHHHHHHH--HHHHHhhcccchhhhhhhccCCc-------ccccc---CCCccceEEEcCCCCCCCCCEEEEEecC
Confidence 345566633333 33444555555566666644422 33344 3456778888777777888999999999
Q ss_pred CCchhhhhhhhccCCCCccCCCcccccCCCcccCCc-----eEEEec------CCccccCCccCCCCccccChHHHHHHH
Q 012861 82 PGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEAN-----MLYLES------PAGVGFSYSANKSFYGSVNDAIAARDN 150 (455)
Q Consensus 82 PG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an-----~l~iDq------PvG~GfSy~~~~~~~~~~~d~~~a~~~ 150 (455)
=|..+-. .+-..|++.|. |+|-|+ |-+.|-++...+.. ...+| +..+
T Consensus 71 ~~sgag~------------------~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~-~g~dd---Vgfl 128 (312)
T COG3509 71 GGSGAGQ------------------LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR-RGVDD---VGFL 128 (312)
T ss_pred CCChHHh------------------hcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc-CCccH---HHHH
Confidence 7766553 24456665554 455541 33445454322110 01122 2233
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC-Ccc-ccchhhhHHhhhccCCCh
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL-EFN-TDFNSRAEFLWSHGLISD 228 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~-dp~-~~~~~~~~~~~~~gli~~ 228 (455)
.+.+.....+| ......+||+|=|-||.++-.++-.-.+ -+.++++..|.. +.. -..+.-.+.+-.||..|.
T Consensus 129 r~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~-----~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 129 RALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPD-----IFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred HHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCcc-----cccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 33333333444 3456689999999999988887765555 377888888887 332 222222334444555443
No 61
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.79 E-value=0.0047 Score=62.59 Aligned_cols=65 Identities=22% Similarity=0.150 Sum_probs=52.1
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcC-CccccccCCcHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRG-ASHEAPLSQPRR 438 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~-AGHmvP~dqP~~ 438 (455)
-..|||+..|+.|.++|....+...+.+... + .+ .++..|.+ +||+.+.++|+.
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~-~-----------------------~~-a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQ-G-----------------------KY-AEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc-C-----------------------CC-eEEEEECCCCCcchhhcCHHH
Confidence 4799999999999999987776665533200 0 13 67788985 999999999999
Q ss_pred HHHHHHHHHcC
Q 012861 439 SLALFNAFLGG 449 (455)
Q Consensus 439 a~~m~~~fl~~ 449 (455)
..+.+.+|+..
T Consensus 377 ~~~~I~~FL~~ 387 (389)
T PRK06765 377 FEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHcc
Confidence 99999999975
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.76 E-value=0.00022 Score=68.19 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=78.2
Q ss_pred CceEEEEEEeccCCCCCCCEEEEECCCCCc---hh-hhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCcccc
Q 012861 55 QRALFYYFVEAATEAASKPLVLWLNGGPGC---SS-IGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGF 129 (455)
Q Consensus 55 ~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~---ss-~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~Gf 129 (455)
...+|.|+++.... ..+|+||.++|-.+- +. ++ ..+ -..+. .-.+++-+|.| |+|.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~-~~l----------------a~~La~~Gy~Vl~~Dl~-G~G~ 69 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMV-ALQ----------------ARAFAAGGFGVLQIDLY-GCGD 69 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHH-HHH----------------HHHHHHCCCEEEEECCC-CCCC
Confidence 45688888866532 337999999986431 11 11 111 01122 35789999999 9998
Q ss_pred CCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 130 SYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 130 Sy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
|..... .. +-+...+|+..+++ |++.. ...+++|+|+|+||..+..+|.+..+ .++++++.+|+++.
T Consensus 70 S~g~~~-~~---~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~-----~v~~lVL~~P~~~g 136 (266)
T TIGR03101 70 SAGDFA-AA---RWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPLAA-----KCNRLVLWQPVVSG 136 (266)
T ss_pred CCCccc-cC---CHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhCcc-----ccceEEEeccccch
Confidence 864322 11 23334455554433 33332 14689999999999999888765433 47899999988775
Q ss_pred cc
Q 012861 210 NT 211 (455)
Q Consensus 210 ~~ 211 (455)
..
T Consensus 137 ~~ 138 (266)
T TIGR03101 137 KQ 138 (266)
T ss_pred HH
Confidence 43
No 63
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.75 E-value=0.00018 Score=73.53 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=76.7
Q ss_pred EEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchh--hhhhhhccCCCCccCCCcccccCCCcccCCceEEEecC
Q 012861 47 YITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSS--IGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESP 124 (455)
Q Consensus 47 yl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss--~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqP 124 (455)
.|.+....+..+.-|++... ..+..|+|| +.||.++.. .+ ..+ -++--.+-.++|-+|.|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~~-~~~---------------~~~La~~Gy~vl~~D~p 231 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDYY-RLF---------------RDYLAPRGIAMLTIDMP 231 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEE-EeCCcccchhhhH-HHH---------------HHHHHhCCCEEEEECCC
Confidence 34443223335555544333 234578887 457777532 22 222 01111234789999999
Q ss_pred CccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecC
Q 012861 125 AGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (455)
Q Consensus 125 vG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGn 204 (455)
|+|.|...... .+. ......+..++...|.....++.|+|.|+||.+++.+|..-.+ .++++++.+
T Consensus 232 -G~G~s~~~~~~-----~d~---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~-----ri~a~V~~~ 297 (414)
T PRK05077 232 -SVGFSSKWKLT-----QDS---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP-----RLKAVACLG 297 (414)
T ss_pred -CCCCCCCCCcc-----ccH---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc-----CceEEEEEC
Confidence 99998542110 111 1112334445556666667789999999999999988864332 388999888
Q ss_pred CCCC
Q 012861 205 PLLE 208 (455)
Q Consensus 205 g~~d 208 (455)
|.++
T Consensus 298 ~~~~ 301 (414)
T PRK05077 298 PVVH 301 (414)
T ss_pred Cccc
Confidence 8764
No 64
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.60 E-value=0.00024 Score=65.71 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=63.4
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-----cCCceEEEecCCccccCCcc-----CCCCc
Q 012861 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-----KEANMLYLESPAGVGFSYSA-----NKSFY 138 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-----~~an~l~iDqPvG~GfSy~~-----~~~~~ 138 (455)
.+..|+||+|+|+++.++.. .. .+.|. .-..+|..|.| |.|.+... .....
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~-~~-----------------~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~ 70 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAY-VI-----------------DWGWKAAADRYGFVLVAPEQT-SYNSSNNCWDWFFTHHRA 70 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHH-hh-----------------hcChHHHHHhCCeEEEecCCc-CccccCCCCCCCCccccC
Confidence 35689999999999876654 11 11122 23578888877 54432210 00000
Q ss_pred cccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 139 GSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 139 ~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
....+ ..++..+++...++++ ....+++|+|+|.||..+-.+|..-.+ .+.++++.+|..
T Consensus 71 ~~~~~---~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~~~~~g~~ 130 (212)
T TIGR01840 71 RGTGE---VESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD-----VFAGGASNAGLP 130 (212)
T ss_pred CCCcc---HHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch-----hheEEEeecCCc
Confidence 00012 2234444444444442 345689999999999987777754333 367877777653
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.51 E-value=0.00022 Score=66.66 Aligned_cols=108 Identities=21% Similarity=0.337 Sum_probs=74.6
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
..-|+++.++|| |.|.+.++.|.- ++ +... ..-++-+|.- |+|-+..++..+. +-+..++|
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~---------el--~s~~---~~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~KD 132 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS---------EL--KSKI---RCRCLALDLR-GHGETKVENEDDL---SLETMSKD 132 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH---------HH--Hhhc---ceeEEEeecc-ccCccccCChhhc---CHHHHHHH
Confidence 456999999998 888875455510 11 1111 1124789977 9999988776664 66777999
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGn 204 (455)
+.+.++.+|..-| .+++|.|||.||-.+.+.|..=.- -+|.|+.+.+
T Consensus 133 ~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~l----psl~Gl~viD 179 (343)
T KOG2564|consen 133 FGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKTL----PSLAGLVVID 179 (343)
T ss_pred HHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhhc----hhhhceEEEE
Confidence 9999998885433 369999999999988665542111 3588888766
No 66
>PRK11071 esterase YqiA; Provisional
Probab=97.36 E-value=0.002 Score=58.53 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=43.6
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRS 439 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a 439 (455)
...+|+|.+|+.|-++|+..+.+..++ .....+.||+|.-. ..+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f~--~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAFV--GFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcchh--hHHHh
Confidence 457899999999999999988777661 22357799999983 33888
Q ss_pred HHHHHHHHc
Q 012861 440 LALFNAFLG 448 (455)
Q Consensus 440 ~~m~~~fl~ 448 (455)
++.+..|++
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999998875
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.33 E-value=0.0021 Score=61.97 Aligned_cols=41 Identities=22% Similarity=0.197 Sum_probs=32.7
Q ss_pred CCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 164 YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 164 ~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
....+++|+|+|+||+.+-.+|.+-.+ .+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~-----~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD-----RFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc-----cceEEEEECCccCc
Confidence 445689999999999988877765444 37899999999876
No 68
>PRK10566 esterase; Provisional
Probab=97.26 E-value=0.0014 Score=61.77 Aligned_cols=111 Identities=10% Similarity=0.053 Sum_probs=64.6
Q ss_pred EEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCccccCCccCCC
Q 012861 58 LFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYSANKS 136 (455)
Q Consensus 58 lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~GfSy~~~~~ 136 (455)
.++-++++.......|+||.++|++|....+ ..+ ...+.+ -.+++.+|.| |.|-|+.....
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~-~~~----------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVY-SYF----------------AVALAQAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchH-HHH----------------HHHHHhCCCEEEEecCC-cccccCCCccc
Confidence 3444455433334579999999998876554 222 112223 4689999988 88866532211
Q ss_pred Cccc--cCh-HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHH
Q 012861 137 FYGS--VND-AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL 187 (455)
Q Consensus 137 ~~~~--~~d-~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 187 (455)
.... ..+ ....+++..++ .++...+.....++.|+|+|+||..+..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 75 RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 1000 000 12334444443 33444444556789999999999998877654
No 69
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.16 E-value=0.00076 Score=65.04 Aligned_cols=110 Identities=15% Similarity=0.191 Sum_probs=68.5
Q ss_pred CCCCEEEEECCCCCch-hhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccc--cChHHH
Q 012861 70 ASKPLVLWLNGGPGCS-SIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGS--VNDAIA 146 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~s-s~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~--~~d~~~ 146 (455)
.+.|++|+++|-.|.. ..+.-.+ .+.+.-....|++.||-+.+ +.. .|.. .+-..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l--------------~~~ll~~~~~nVi~vD~~~~---~~~----~y~~a~~~~~~v 92 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDL--------------RKAYLSRGDYNVIVVDWGRG---ANP----NYPQAVNNTRVV 92 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHH--------------HHHHHhcCCCEEEEEECccc---ccc----ChHHHHHhHHHH
Confidence 4579999999987765 2221111 01111124589999998833 211 1211 123345
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
++++..+|+...+.. .+...+++|+|+|+||+.+-.+|.++.+ .++.|+..+|.
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG-----KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----ccceeEEecCC
Confidence 666666666655542 2334689999999999999888887654 48888887765
No 70
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.07 E-value=0.0039 Score=57.34 Aligned_cols=105 Identities=22% Similarity=0.228 Sum_probs=67.2
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~ 151 (455)
.|.+++++|+|+++..+ ....+..+ .... + .+++.+|+| |.|.|. .. .+ .....++++.
T Consensus 21 ~~~i~~~hg~~~~~~~~-~~~~~~~~---------~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~~~ 79 (282)
T COG0596 21 GPPLVLLHGFPGSSSVW-RPVFKVLP---------ALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADDLA 79 (282)
T ss_pred CCeEEEeCCCCCchhhh-HHHHHHhh---------cccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHHHH
Confidence 67999999999999987 33100000 0011 1 899999999 999997 11 11 1111133444
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 152 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.+++ .. ...++.+.|+|+||..+-.+|.+..+ .++++++.++...+
T Consensus 80 ~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~-----~~~~~v~~~~~~~~ 125 (282)
T COG0596 80 ALLD----AL---GLEKVVLVGHSMGGAVALALALRHPD-----RVRGLVLIGPAPPP 125 (282)
T ss_pred HHHH----Hh---CCCceEEEEecccHHHHHHHHHhcch-----hhheeeEecCCCCc
Confidence 4443 32 23349999999998888777776666 47888888876653
No 71
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.00 E-value=0.0068 Score=59.72 Aligned_cols=138 Identities=14% Similarity=0.200 Sum_probs=86.4
Q ss_pred CCCceEEEEEEeccC-CC-CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCcccc
Q 012861 53 KQQRALFYYFVEAAT-EA-ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGF 129 (455)
Q Consensus 53 ~~~~~lfy~~~es~~-~~-~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~Gf 129 (455)
+....++-+.|.... .+ ..+|++||++||--|-+.- .. ....+--.+. +.+|.+.| .++|
T Consensus 69 ~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--~~-----------~~y~~~~~~~a~~~~~vvv----SVdY 131 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--NS-----------PAYDSFCTRLAAELNCVVV----SVDY 131 (336)
T ss_pred cCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--CC-----------chhHHHHHHHHHHcCeEEE----ecCc
Confidence 345678988887654 33 6899999999998776641 00 0001112222 44555443 2344
Q ss_pred CCccCCCCccccChHHHHHHHHHHHHH-HHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhc-ccCCceeeEecCCCC
Q 012861 130 SYSANKSFYGSVNDAIAARDNLAFLEG-WYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN-MKLNLKGIAIGNPLL 207 (455)
Q Consensus 130 Sy~~~~~~~~~~~d~~~a~~~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n-~~inLkGi~IGng~~ 207 (455)
=.+... .++. .-++.-..+..+++. |.+..-..+ .++|+|.|-||..+-.+|.++.+.. .++.|+|.++.-|++
T Consensus 132 RLAPEh-~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 132 RLAPEH-PFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred ccCCCC-CCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 443322 2332 222222234444554 776654443 4999999999999999999999864 558999999999988
Q ss_pred Cccc
Q 012861 208 EFNT 211 (455)
Q Consensus 208 dp~~ 211 (455)
....
T Consensus 208 ~~~~ 211 (336)
T KOG1515|consen 208 QGTD 211 (336)
T ss_pred CCCC
Confidence 6644
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.96 E-value=0.0032 Score=64.24 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=53.6
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 194 (455)
..|+|-+|-| |.|-|.-..... +...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+...
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~~----~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSAA----YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCCCCccccc----cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999998 555442111111 34566777777776544333 2445689999999999988877764433
Q ss_pred CCceeeEecCCC
Q 012861 195 LNLKGIAIGNPL 206 (455)
Q Consensus 195 inLkGi~IGng~ 206 (455)
.|.+|.+.||.
T Consensus 143 -rV~rItgLDPA 153 (442)
T TIGR03230 143 -KVNRITGLDPA 153 (442)
T ss_pred -ceeEEEEEcCC
Confidence 47888888874
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=96.93 E-value=0.0029 Score=61.28 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
+++...+..++.. +...+++|+|.|+||+-+-.+|.+-.+ .+++++..+|..+|.
T Consensus 127 ~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~-----~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD-----KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch-----hEEEEEEECCccCcc
Confidence 3444555555543 345678999999999877777765444 378999999988863
No 74
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.91 E-value=0.075 Score=53.03 Aligned_cols=81 Identities=9% Similarity=0.030 Sum_probs=49.0
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 194 (455)
-.+++-+|.. |.|.|.. .+ + -++-...++-++++...+..+ ..++++.|+|+||..+..++....+
T Consensus 94 G~~V~~~D~~-g~g~s~~----~~-~-~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~---- 159 (350)
T TIGR01836 94 GQDVYLIDWG-YPDRADR----YL-T-LDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD---- 159 (350)
T ss_pred CCeEEEEeCC-CCCHHHh----cC-C-HHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch----
Confidence 3578888965 5555431 11 1 122222334445554444443 4689999999999977666544332
Q ss_pred CCceeeEecCCCCCcc
Q 012861 195 LNLKGIAIGNPLLEFN 210 (455)
Q Consensus 195 inLkGi~IGng~~dp~ 210 (455)
.++++++.++.++..
T Consensus 160 -~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 160 -KIKNLVTMVTPVDFE 174 (350)
T ss_pred -heeeEEEeccccccC
Confidence 378888888777653
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.77 E-value=0.13 Score=54.01 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=52.4
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 194 (455)
-..++-||-+ |.|.|..... -++-+.+.+.++|..+.+.. ...+++++|+|.||..+...+..+......
T Consensus 220 Gf~V~~iDwr-gpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~~ 289 (532)
T TIGR01838 220 GHTVFVISWR-NPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGDD 289 (532)
T ss_pred CcEEEEEECC-CCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCCC
Confidence 3578889977 8787743211 12223334555666555443 357899999999999876533222222111
Q ss_pred CCceeeEecCCCCCcc
Q 012861 195 LNLKGIAIGNPLLEFN 210 (455)
Q Consensus 195 inLkGi~IGng~~dp~ 210 (455)
-.++++++.+..+|..
T Consensus 290 ~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 290 KRIKSATFFTTLLDFS 305 (532)
T ss_pred CccceEEEEecCcCCC
Confidence 2478988888888764
No 76
>PLN00021 chlorophyllase
Probab=96.73 E-value=0.0065 Score=59.67 Aligned_cols=116 Identities=15% Similarity=0.114 Sum_probs=69.6
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHH
Q 012861 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~ 148 (455)
..+.|+|++++|+.+.+..+ ..+.+ .-.+ .-..++.+|.+ | ++.... . .+...+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y-~~l~~-------------~Las--~G~~VvapD~~-g--~~~~~~---~---~~i~d~~ 103 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFY-SQLLQ-------------HIAS--HGFIVVAPQLY-T--LAGPDG---T---DEIKDAA 103 (313)
T ss_pred CCCCCEEEEECCCCCCcccH-HHHHH-------------HHHh--CCCEEEEecCC-C--cCCCCc---h---hhHHHHH
Confidence 35689999999997766554 22211 0011 13568888877 3 332111 1 2222344
Q ss_pred HHHHHHHHHHHH-CC---CCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 149 DNLAFLEGWYEK-FP---EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 149 ~~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
++..++.+-++. .| +....+++|+|+|+||+.+-.+|.+..+......+++++..+|+...
T Consensus 104 ~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 104 AVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 556666654332 22 23346799999999999988888765543323568899988887543
No 77
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.71 E-value=0.07 Score=51.85 Aligned_cols=68 Identities=28% Similarity=0.427 Sum_probs=50.5
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEe-CCeeEEEEEcCCccccc--cCCcH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVY-GDILSFATIRGASHEAP--LSQPR 437 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~-gn~Ltf~~V~~AGHmvP--~dqP~ 437 (455)
..+|+||+|..|-++|+..+.+.++++-. .. .+ ++|.++.+++|+.. ...|.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~------------------------~G~a~-V~~~~~~~~~H~~~~~~~~~~ 273 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCA------------------------AGGAD-VEYVRYPGGGHLGAAFASAPD 273 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHH------------------------cCCCC-EEEEecCCCChhhhhhcCcHH
Confidence 68999999999999999999999985531 11 14 89999999999965 46775
Q ss_pred HHHHHHHHHHcCCCCCC
Q 012861 438 RSLALFNAFLGGKPLPG 454 (455)
Q Consensus 438 ~a~~m~~~fl~~~~~~~ 454 (455)
+.-.|-+ =+.|++.++
T Consensus 274 a~~Wl~~-rf~G~~~~~ 289 (290)
T PF03583_consen 274 ALAWLDD-RFAGKPATS 289 (290)
T ss_pred HHHHHHH-HHCCCCCCC
Confidence 5544444 445666553
No 78
>PRK10115 protease 2; Provisional
Probab=96.71 E-value=0.0085 Score=65.26 Aligned_cols=138 Identities=12% Similarity=0.022 Sum_probs=78.6
Q ss_pred CCCceEEEEEEeccC--CCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCcccc
Q 012861 53 KQQRALFYYFVEAAT--EAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGF 129 (455)
Q Consensus 53 ~~~~~lfy~~~es~~--~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~Gf 129 (455)
..|..+-.|++.... .....|+||+.+||||.+... ++..+. .+|.. -.-+++..--=|+||
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~--------------~~l~~rG~~v~~~n~RGs~g~ 488 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR--------------LSLLDRGFVYAIVHVRGGGEL 488 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH--------------HHHHHCCcEEEEEEcCCCCcc
Confidence 345566655443221 234569999999999998654 332111 23443 234455554445555
Q ss_pred CCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 130 SYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 130 Sy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
...-....... +-....+|+.++.+-..+ ..--....+.|.|-||||..+-.++.+-.+ -++.++.+.|++|.
T Consensus 489 G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd-----lf~A~v~~vp~~D~ 561 (686)
T PRK10115 489 GQQWYEDGKFL-KKKNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVAINQRPE-----LFHGVIAQVPFVDV 561 (686)
T ss_pred CHHHHHhhhhh-cCCCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHHHhcChh-----heeEEEecCCchhH
Confidence 54211110000 001223466655543333 333345789999999999977666644444 38999999999998
Q ss_pred ccc
Q 012861 210 NTD 212 (455)
Q Consensus 210 ~~~ 212 (455)
...
T Consensus 562 ~~~ 564 (686)
T PRK10115 562 VTT 564 (686)
T ss_pred hhh
Confidence 653
No 79
>PRK10162 acetyl esterase; Provisional
Probab=96.53 E-value=0.0088 Score=58.95 Aligned_cols=85 Identities=7% Similarity=0.030 Sum_probs=52.3
Q ss_pred CCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc-
Q 012861 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM- 193 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~- 193 (455)
...|+-+|-+..-.. .|+. .-++ +.+.+.++.+..+.+ .....++.|+|+|.||+.+..+|.++.+...
T Consensus 112 g~~Vv~vdYrlape~-------~~p~-~~~D-~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~ 181 (318)
T PRK10162 112 GCTVIGIDYTLSPEA-------RFPQ-AIEE-IVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQID 181 (318)
T ss_pred CCEEEEecCCCCCCC-------CCCC-cHHH-HHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 467788885532221 2322 2111 223344454443333 2234689999999999999999987766432
Q ss_pred cCCceeeEecCCCCCc
Q 012861 194 KLNLKGIAIGNPLLEF 209 (455)
Q Consensus 194 ~inLkGi~IGng~~dp 209 (455)
...++|+++..|+++.
T Consensus 182 ~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 182 CGKVAGVLLWYGLYGL 197 (318)
T ss_pred ccChhheEEECCccCC
Confidence 1467899999888774
No 80
>PRK13604 luxD acyl transferase; Provisional
Probab=96.53 E-value=0.17 Score=49.29 Aligned_cols=125 Identities=10% Similarity=0.115 Sum_probs=72.5
Q ss_pred CCceEEEEEEecc-CCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCc
Q 012861 54 QQRALFYYFVEAA-TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYS 132 (455)
Q Consensus 54 ~~~~lfy~~~es~-~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~ 132 (455)
.+..|.=|+.+.+ +++...|++|..+ |.|+....+--| -.+=+.+-.++|-.|.--|.|-|-+
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~~~~---------------A~~La~~G~~vLrfD~rg~~GeS~G 81 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIAS-GFARRMDHFAGL---------------AEYLSSNGFHVIRYDSLHHVGLSSG 81 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHHHHHH---------------HHHHHHCCCEEEEecCCCCCCCCCC
Confidence 4567777777664 3456678888877 566654311111 2334466789999997645688854
Q ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 133 ~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+-. +... +. ...|+..++. |++.. ...++.|.|+|.||.-+...|. ..+++++++.+|+.+-
T Consensus 82 ~~~-~~t~-s~--g~~Dl~aaid-~lk~~---~~~~I~LiG~SmGgava~~~A~-------~~~v~~lI~~sp~~~l 143 (307)
T PRK13604 82 TID-EFTM-SI--GKNSLLTVVD-WLNTR---GINNLGLIAASLSARIAYEVIN-------EIDLSFLITAVGVVNL 143 (307)
T ss_pred ccc-cCcc-cc--cHHHHHHHHH-HHHhc---CCCceEEEEECHHHHHHHHHhc-------CCCCCEEEEcCCcccH
Confidence 321 1111 11 1234432222 23322 1357999999999987543332 1258899999888653
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.52 E-value=0.014 Score=62.12 Aligned_cols=129 Identities=16% Similarity=0.132 Sum_probs=77.6
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc-ccCCceEEEecCCccccCCc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYS 132 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw-~~~an~l~iDqPvG~GfSy~ 132 (455)
.+..|+..++.... ....|+||.++|-...+... ... + . ....-| .+-..++.+|.+ |+|.|.+
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~-~~~-~----~-------~~~~~l~~~Gy~vv~~D~R-G~g~S~g 69 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLR-WGL-D----K-------TEPAWFVAQGYAVVIQDTR-GRGASEG 69 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhc-ccc-c----c-------ccHHHHHhCCcEEEEEecc-ccccCCC
Confidence 35678765553322 34689999999764432210 000 0 0 001112 246789999988 9999975
Q ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 133 ~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.... + . ...++|+.++++ |+.+.|. .+.++.++|.||||..+-.+|..-. -.|++++..+++.|.
T Consensus 70 ~~~~-~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~-----~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 70 EFDL-L---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQP-----PALRAIAPQEGVWDL 134 (550)
T ss_pred ceEe-c---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccCC-----CceeEEeecCcccch
Confidence 4321 1 1 234556666665 5555553 3468999999999987666554322 259999998888664
No 82
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.35 E-value=0.015 Score=53.83 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=33.8
Q ss_pred CCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 163 EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 163 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
....+++|++|.|-||.....+|....+ -+.++++.+|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd-----~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD-----LFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc-----cceEEEeecccc
Confidence 5567899999999999999888887777 488999888873
No 83
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.33 E-value=0.014 Score=64.00 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=78.6
Q ss_pred ceEEEEEEeccC--CCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCccccCCc
Q 012861 56 RALFYYFVEAAT--EAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYS 132 (455)
Q Consensus 56 ~~lfy~~~es~~--~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~GfSy~ 132 (455)
-..++++.-..+ +.++-||+++..||||+-+.. +.| .+..|.+.+. ..+=++.|| +-|+|+.-.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~~-----------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~ 574 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SKF-----------SVDWNEVVVSSRGFAVLQVD-GRGSGGYGW 574 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-eeE-----------EecHHHHhhccCCeEEEEEc-CCCcCCcch
Confidence 445566554432 334669999999999944443 333 2223444444 345588899 668886532
Q ss_pred cC-CCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 133 AN-KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 133 ~~-~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.- ...+....+. -.+|.....+.+.+.+ ..-...+.|+|-||||...-.+. .....--+|--+..+|++|..
T Consensus 575 ~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~~~l----~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 575 DFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTLKLL----ESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred hHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHHHHh----hhCcCceEEEEEEecceeeee
Confidence 21 1111111111 1345566666666655 55566899999999998554443 322112356667888888886
No 84
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.25 E-value=0.23 Score=51.64 Aligned_cols=86 Identities=17% Similarity=0.305 Sum_probs=62.9
Q ss_pred HHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccc
Q 012861 351 IHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHE 430 (455)
Q Consensus 351 ~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHm 430 (455)
.+.|....++|=|+|+|+|..|.+++..++.++-+++...++-. ... ++.+ .-|..|+|.||-
T Consensus 343 ~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-~~~-------------v~dF---~RlF~vPGm~HC 405 (474)
T PF07519_consen 343 DPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-LAD-------------VDDF---YRLFMVPGMGHC 405 (474)
T ss_pred CcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-ccc-------------ccce---eEEEecCCCccc
Confidence 35677777899999999999999999999999999886443321 001 1111 456899999998
Q ss_pred c--ccCCcHHHHHHHHHHHcCCCCC
Q 012861 431 A--PLSQPRRSLALFNAFLGGKPLP 453 (455)
Q Consensus 431 v--P~dqP~~a~~m~~~fl~~~~~~ 453 (455)
- |-..|-.++..|.+|+.+..-|
T Consensus 406 ~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 406 GGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 5 4446667888888899765444
No 85
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.13 E-value=0.025 Score=52.47 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=68.8
Q ss_pred EEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCccccCCccCCCCccccChHHHHHHHHH
Q 012861 74 LVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (455)
Q Consensus 74 l~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~ 152 (455)
.|+++.+|=|+++.+..+.... .+ ..++..|+.| |-+ . +. ... .+-++.|+.+.+
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l-----------------~~~~~~v~~i~~~-~~~--~--~~-~~~-~si~~la~~y~~ 57 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARAL-----------------PDDVIGVYGIEYP-GRG--D--DE-PPP-DSIEELASRYAE 57 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHH-----------------TTTEEEEEEECST-TSC--T--TS-HEE-SSHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhC-----------------CCCeEEEEEEecC-CCC--C--CC-CCC-CCHHHHHHHHHH
Confidence 5788999988777752222111 12 4678999988 444 1 11 111 156667767666
Q ss_pred HHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 153 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
.|+ +..|+ .|++|+|.|+||..+=.+|.+|.+++ .....+++.|+..
T Consensus 58 ~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G--~~v~~l~liD~~~ 104 (229)
T PF00975_consen 58 AIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG--EEVSRLILIDSPP 104 (229)
T ss_dssp HHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT---SESEEEEESCSS
T ss_pred Hhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh--hccCceEEecCCC
Confidence 665 34443 39999999999999999999998863 4678899888653
No 86
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.79 E-value=0.58 Score=45.39 Aligned_cols=89 Identities=17% Similarity=0.183 Sum_probs=56.4
Q ss_pred ccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccC-CCcccccCCCcccCCceEEEecCCccccCCccCCCCccccCh
Q 012861 65 AATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS-GDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVND 143 (455)
Q Consensus 65 s~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~-~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d 143 (455)
+..+..+.|-++-++|==|+--.+ .-+. .+ ..++ -+.+.-||.- -.|.|-....- +-
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~------k~Ls~~l---------~~~v~~vd~R-nHG~Sp~~~~h-----~~ 102 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENW-RSVA------KNLSRKL---------GRDVYAVDVR-NHGSSPKITVH-----NY 102 (315)
T ss_pred cccccCCCCceEEecccccCCCCH-HHHH------HHhcccc---------cCceEEEecc-cCCCCcccccc-----CH
Confidence 444677889999999766654333 2110 00 0011 1278888977 88988643322 45
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeecccc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAG 178 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG 178 (455)
+..|.|+..|+...-. .++..+..|.|||.||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 5667787777775432 2356789999999999
No 87
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.56 E-value=0.017 Score=49.08 Aligned_cols=93 Identities=23% Similarity=0.327 Sum_probs=60.3
Q ss_pred EEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHH
Q 012861 74 LVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (455)
Q Consensus 74 l~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~ 152 (455)
+||+++|+.|.+..+ ..+.+ .+. +-.+++.+|.| +.|.|.. .+ .++++++
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~----------------~l~~~G~~v~~~~~~-~~~~~~~---------~~--~~~~~~~ 51 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAE----------------ALAEQGYAVVAFDYP-GHGDSDG---------AD--AVERVLA 51 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHH----------------HHHHTTEEEEEESCT-TSTTSHH---------SH--HHHHHHH
T ss_pred CEEEECCCCCCHHHH-HHHHH----------------HHHHCCCEEEEEecC-CCCccch---------hH--HHHHHHH
Confidence 589999998876664 33311 222 24678889988 6665511 11 2233333
Q ss_pred HHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 153 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
.+. +..+ ..++++|+|.|.||..+..++.+- . .+++++..+|+
T Consensus 52 ~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-~-----~v~~~v~~~~~ 94 (145)
T PF12695_consen 52 DIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-P-----RVKAVVLLSPY 94 (145)
T ss_dssp HHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-T-----TESEEEEESES
T ss_pred HHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-c-----ceeEEEEecCc
Confidence 332 3333 467999999999999888887744 2 58999998884
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.37 E-value=0.053 Score=54.58 Aligned_cols=82 Identities=21% Similarity=0.186 Sum_probs=52.9
Q ss_pred cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc
Q 012861 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (455)
Q Consensus 114 ~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 193 (455)
+--++|-||=| |||+|.... +. .| ...++..+-.|+...|+.....+-++|-|.||.|++.+|.-=.+
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~--~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--- 284 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LT--QD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--- 284 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S---S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT---
T ss_pred CCCEEEEEccC-CCcccccCC---CC--cC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc---
Confidence 55679999999 999985322 11 11 12345566677778899888899999999999999999853222
Q ss_pred cCCceeeEecCCCCCc
Q 012861 194 KLNLKGIAIGNPLLEF 209 (455)
Q Consensus 194 ~inLkGi~IGng~~dp 209 (455)
.|||++.-.|.++-
T Consensus 285 --RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 285 --RLKAVVALGAPVHH 298 (411)
T ss_dssp --T-SEEEEES---SC
T ss_pred --ceeeEeeeCchHhh
Confidence 38997766665543
No 89
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.28 E-value=0.06 Score=43.57 Aligned_cols=65 Identities=25% Similarity=0.373 Sum_probs=52.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
..+||+.+|..|.++|+.+.+...+.|. + -..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~----------------------------~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP----------------------------G-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC----------------------------C-ceEEEEeccCcceecCCChHHH
Confidence 4899999999999999999998888431 2 3458999999999865556678
Q ss_pred HHHHHHHcCCCCCC
Q 012861 441 ALFNAFLGGKPLPG 454 (455)
Q Consensus 441 ~m~~~fl~~~~~~~ 454 (455)
+++.+|+....+|+
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 88888888766653
No 90
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=95.27 E-value=0.19 Score=48.14 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=50.0
Q ss_pred cccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHh
Q 012861 112 WNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 112 w~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 191 (455)
-.+.+-++=||.| |-..--.+-..+|.--+-++-|+++...|..| .=+.+.-+|+--|+.-...+|..-.+
T Consensus 52 i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~p~- 122 (283)
T PF03096_consen 52 ILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKHPE- 122 (283)
T ss_dssp HHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHSGG-
T ss_pred HhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccCcc-
Confidence 3567778889988 76654333334422114556677766666532 23468999999877776777754444
Q ss_pred cccCCceeeEecCCCCCccccchhhhHHhh
Q 012861 192 NMKLNLKGIAIGNPLLEFNTDFNSRAEFLW 221 (455)
Q Consensus 192 n~~inLkGi~IGng~~dp~~~~~~~~~~~~ 221 (455)
.+.|+++.|+.... +++.++++
T Consensus 123 ----~V~GLiLvn~~~~~----~gw~Ew~~ 144 (283)
T PF03096_consen 123 ----RVLGLILVNPTCTA----AGWMEWFY 144 (283)
T ss_dssp ----GEEEEEEES---S-------HHHHHH
T ss_pred ----ceeEEEEEecCCCC----ccHHHHHH
Confidence 38899998876544 45555544
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.17 E-value=0.14 Score=49.03 Aligned_cols=118 Identities=18% Similarity=0.277 Sum_probs=73.9
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCC----CccccChHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKS----FYGSVNDAIAA 147 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~----~~~~~~d~~~a 147 (455)
+++++|+-|-||.-+-+ --|.+ .|..+- +....++=+... |+|...... .....+-+++.
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~---------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLS---------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHH---------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHHHH
Confidence 58999999999998886 22211 111110 456667777755 666544331 11112556666
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
+.-.+||+++....+ ..+.+++|.|||-|++.+-.+..++.+ ...+++++++.=|.+.
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~--~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD--LKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc--cCCceeEEEEeCCccc
Confidence 677889998887653 236799999999997766655555551 1356777776666553
No 92
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.93 E-value=0.11 Score=47.29 Aligned_cols=126 Identities=20% Similarity=0.271 Sum_probs=84.1
Q ss_pred EEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCc----ccCCceEEEec
Q 012861 48 ITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW----NKEANMLYLES 123 (455)
Q Consensus 48 l~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw----~~~an~l~iDq 123 (455)
+++....+-.|.=|...+++ ++|.+++++|--|-- |.+. +-.| +=..||+-+|-
T Consensus 57 i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGNm----Ghr~---------------~i~~~fy~~l~mnv~ivsY 114 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGNM----GHRL---------------PIARVFYVNLKMNVLIVSY 114 (300)
T ss_pred EEEEcCcceeEeeeeecccC---CCceEEEEccCCCcc----cchh---------------hHHHHHHHHcCceEEEEEe
Confidence 44432233455544444443 789999999876532 3221 1122 34578999997
Q ss_pred CCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEec
Q 012861 124 PAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (455)
Q Consensus 124 PvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IG 203 (455)
- |-|-|.+.....--. -|.+++- .++-..|...++++.++|.|-||.-+-.+|.+-.+ .+.++++-
T Consensus 115 R-GYG~S~GspsE~GL~-lDs~avl-------dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~-----ri~~~ivE 180 (300)
T KOG4391|consen 115 R-GYGKSEGSPSEEGLK-LDSEAVL-------DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD-----RISAIIVE 180 (300)
T ss_pred e-ccccCCCCcccccee-ccHHHHH-------HHHhcCccCCcceEEEEecccCCeeEEEeeccchh-----heeeeeee
Confidence 7 999998765432111 3544442 33456788999999999999999999999987777 48899999
Q ss_pred CCCCCc
Q 012861 204 NPLLEF 209 (455)
Q Consensus 204 ng~~dp 209 (455)
|-+++-
T Consensus 181 NTF~SI 186 (300)
T KOG4391|consen 181 NTFLSI 186 (300)
T ss_pred chhccc
Confidence 988764
No 93
>PRK11460 putative hydrolase; Provisional
Probab=94.61 E-value=0.19 Score=47.11 Aligned_cols=51 Identities=6% Similarity=-0.101 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+.++++...++. ....++++|+|.|.||..+-.+|.+-.+ .+.+++..+|.
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~~~-----~~~~vv~~sg~ 137 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAEPG-----LAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhCCC-----cceEEEEeccc
Confidence 334444333333 3445689999999999998777654222 24556655553
No 94
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.17 E-value=4.4 Score=37.83 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=45.5
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
..+|.++.|+.|.+|...-...|-+.. .+. +++- +...|||-+.+|.+.+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t---------------------------~~~-f~l~-~fdGgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHT---------------------------KGD-FTLR-VFDGGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhh---------------------------cCC-ceEE-EecCcceehhhhHHHHH
Confidence 589999999999999877666666521 113 5544 44589999999999999
Q ss_pred HHHHHHHc
Q 012861 441 ALFNAFLG 448 (455)
Q Consensus 441 ~m~~~fl~ 448 (455)
..+.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 99888875
No 95
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.05 E-value=0.52 Score=47.35 Aligned_cols=119 Identities=16% Similarity=0.300 Sum_probs=75.2
Q ss_pred EEEEEEeccC----CCCCCCEEEEECCCCCchhhh-----hhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccc
Q 012861 58 LFYYFVEAAT----EAASKPLVLWLNGGPGCSSIG-----AGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVG 128 (455)
Q Consensus 58 lfy~~~es~~----~~~~~Pl~~wlnGGPG~ss~~-----~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~G 128 (455)
..=|+..... +..++|+++.|.|=.|.|..- +...++.| ++ ++-. .+-|.|
T Consensus 107 ~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r------------------~VVf-N~RG~~ 166 (409)
T KOG1838|consen 107 TLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR------------------VVVF-NHRGLG 166 (409)
T ss_pred EEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE------------------EEEE-CCCCCC
Confidence 3337654432 246789999999999988763 24444455 33 2222 256988
Q ss_pred cCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccC-CceeeEecCCC
Q 012861 129 FSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL-NLKGIAIGNPL 206 (455)
Q Consensus 129 fSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~i-nLkGi~IGng~ 206 (455)
-|-.++..-|.. ... +|+-.+++---++|| .+++|.+|.|+||..+ ..+|-+..++- =..|++|-|||
T Consensus 167 g~~LtTpr~f~a-g~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 167 GSKLTTPRLFTA-GWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred CCccCCCceeec-CCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhccCCCCceeEEEEeccc
Confidence 888776655432 222 244444444446888 5799999999999864 55565554443 34788888888
No 96
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.63 E-value=0.25 Score=51.72 Aligned_cols=55 Identities=18% Similarity=0.016 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
.++++++-...|. -..+++.|+|||+||+.+-.++..-.. +--++++++.+|...
T Consensus 160 al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~---~~lf~~~i~~sg~~~ 214 (493)
T cd00312 160 ALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDS---KGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcch---hHHHHHHhhhcCCcc
Confidence 3667777666664 345689999999999876555432111 112455555555443
No 97
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.57 E-value=2.4 Score=42.52 Aligned_cols=93 Identities=20% Similarity=0.275 Sum_probs=55.1
Q ss_pred CCEEEEECCCCCchhhh---hhhhccCCCCccCCCcccccCCCcccCCceEEEe-------cCCccccCCccCC-CCccc
Q 012861 72 KPLVLWLNGGPGCSSIG---AGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLE-------SPAGVGFSYSANK-SFYGS 140 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~---~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iD-------qPvG~GfSy~~~~-~~~~~ 140 (455)
-|+. +..|-=|.--.+ -|++.|++|- -.|-|||++ +|.|.- ||.+.. -.|-
T Consensus 81 gPIf-fYtGNEGdie~Fa~ntGFm~D~Ap~---------------~~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL- 142 (492)
T KOG2183|consen 81 GPIF-FYTGNEGDIEWFANNTGFMWDLAPE---------------LKALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL- 142 (492)
T ss_pred CceE-EEeCCcccHHHHHhccchHHhhhHh---------------hCceEEEeehhccccCCCCcch-hccChhhhccc-
Confidence 5554 455665532221 3777777773 256678887 466655 443221 1342
Q ss_pred cChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHH
Q 012861 141 VNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQL 184 (455)
Q Consensus 141 ~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 184 (455)
+.+++..|+..+|+ ++++..-=+..|+..+|-||||+.+.-+
T Consensus 143 -tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 143 -TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred -cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 56666667766555 4444333346799999999999655443
No 98
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.51 E-value=1.1 Score=43.02 Aligned_cols=53 Identities=9% Similarity=-0.021 Sum_probs=38.9
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
.+.+.+=+...+....+++|++|-|-||.-.-+++.+..+ -+.+.+...|==|
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd-----fFAaa~~iaG~~d 305 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD-----FFAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch-----hhheeeeecCCCc
Confidence 3445544455667778899999999999988888888777 3677776665444
No 99
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=92.85 E-value=2.8 Score=40.23 Aligned_cols=94 Identities=11% Similarity=-0.003 Sum_probs=56.7
Q ss_pred cccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHh
Q 012861 112 WNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 112 w~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 191 (455)
-..++-+.=||.| |.-.--..-..+|.--+-++.|+++...|+. |.-+-+.=+|+--|......+|..-.+
T Consensus 75 i~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~-------f~lk~vIg~GvGAGAyIL~rFAl~hp~- 145 (326)
T KOG2931|consen 75 ILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDH-------FGLKSVIGMGVGAGAYILARFALNHPE- 145 (326)
T ss_pred HHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHh-------cCcceEEEecccccHHHHHHHHhcChh-
Confidence 3455778889988 5443322112232111455678788777763 333467888998776666667766555
Q ss_pred cccCCceeeEecCCCCCccccchhhhHHhhh
Q 012861 192 NMKLNLKGIAIGNPLLEFNTDFNSRAEFLWS 222 (455)
Q Consensus 192 n~~inLkGi~IGng~~dp~~~~~~~~~~~~~ 222 (455)
.+-|+++.|..-.. .++.+++|+
T Consensus 146 ----rV~GLvLIn~~~~a----~gwiew~~~ 168 (326)
T KOG2931|consen 146 ----RVLGLVLINCDPCA----KGWIEWAYN 168 (326)
T ss_pred ----heeEEEEEecCCCC----chHHHHHHH
Confidence 38899998854332 455565553
No 100
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.44 E-value=1.4 Score=43.03 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=72.2
Q ss_pred EEEeccCCCCCCCEEEEECCCCCchhhhhhhhccC-CCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCcc
Q 012861 61 YFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEH-GPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYG 139 (455)
Q Consensus 61 ~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~-GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~ 139 (455)
+|.+......+.|+||+++||==.. |-...+ .++ ....=..-+-++-||-+..-... |+
T Consensus 68 ~y~p~~~~~~~~p~vly~HGGg~~~----g~~~~~~~~~---------~~~~~~~g~~vv~vdYrlaPe~~-------~p 127 (312)
T COG0657 68 VYRPDRKAAATAPVVLYLHGGGWVL----GSLRTHDALV---------ARLAAAAGAVVVSVDYRLAPEHP-------FP 127 (312)
T ss_pred EECCCCCCCCCCcEEEEEeCCeeee----cChhhhHHHH---------HHHHHHcCCEEEecCCCCCCCCC-------CC
Confidence 4444234456799999999992111 111000 000 01111234456777755333332 32
Q ss_pred ccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccc
Q 012861 140 SVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 140 ~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~ 211 (455)
. .-++ +.+.+.++.+=-..+ ....+++.|+|+|-||+.+..+|....+. .....++.++..|++|...
T Consensus 128 ~-~~~d-~~~a~~~l~~~~~~~-g~dp~~i~v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 128 A-ALED-AYAAYRWLRANAAEL-GIDPSRIAVAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred c-hHHH-HHHHHHHHHhhhHhh-CCCccceEEEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCcc
Confidence 2 2222 223344444322222 23367899999999999999999988875 2356889999999999875
No 101
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=91.80 E-value=0.45 Score=52.57 Aligned_cols=85 Identities=18% Similarity=0.268 Sum_probs=55.6
Q ss_pred ccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHC--------------CCCCCCcEEEEeecccc
Q 012861 113 NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKF--------------PEYKNREFFITGESYAG 178 (455)
Q Consensus 113 ~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~f--------------p~~~~~~~yi~GESYgG 178 (455)
.+-.++|++|.+ |+|-|.+.-.. + .....+|..+.+. |+... -.+.+-.+-++|.||+|
T Consensus 277 ~rGYaVV~~D~R-Gtg~SeG~~~~-~----~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 277 PRGFAVVYVSGI-GTRGSDGCPTT-G----DYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hCCeEEEEEcCC-CCCCCCCcCcc-C----CHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 357899999966 99999875322 1 1122234333332 44421 12345689999999999
Q ss_pred ccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 179 HYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 179 ~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
...-.+|..-.. .||.|+-..|+.+.
T Consensus 350 ~~~~~aAa~~pp-----~LkAIVp~a~is~~ 375 (767)
T PRK05371 350 TLPNAVATTGVE-----GLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHhhCCC-----cceEEEeeCCCCcH
Confidence 988777654433 59999988888664
No 102
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.74 E-value=0.55 Score=39.74 Aligned_cols=58 Identities=26% Similarity=0.334 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc--CCceeeEecCCCC
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPLL 207 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~--inLkGi~IGng~~ 207 (455)
.+.+.+.|++..+++| +..+.|+|||-||-.+..+|..+.++... .+++-+..|.|-+
T Consensus 47 ~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 4456677777777777 56899999999999999999999886544 6777788777665
No 103
>PRK11460 putative hydrolase; Provisional
Probab=91.50 E-value=0.4 Score=44.88 Aligned_cols=63 Identities=14% Similarity=0.271 Sum_probs=47.8
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRS 439 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a 439 (455)
.+.+|++.+|..|.++|....++..+.|+. .+ .+ .++..+.++||.+..+.-+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~-~g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALIS-LG-----------------------GD-VTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHH-CC-----------------------CC-eEEEEECCCCCCCCHHHHHHH
Confidence 368999999999999999999888886642 11 13 778888999999976555555
Q ss_pred HHHHHHHH
Q 012861 440 LALFNAFL 447 (455)
Q Consensus 440 ~~m~~~fl 447 (455)
.+.+++++
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 65555555
No 104
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.96 E-value=0.75 Score=39.80 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
.++.+...+++..+.+| ..+++|+|+|.||..+-.+|..+.++...-.++-+..|.|-
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455556666665666 56799999999999999999888775322234555555544
No 105
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=90.95 E-value=0.79 Score=50.32 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=60.3
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCccccCCcc-C--------CC--Cc
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSA-N--------KS--FY 138 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~GfSy~~-~--------~~--~~ 138 (455)
..|+|+++||=.|....+ -.+.+ .+. +-..++-+|.| |+|-|... + .+ .|
T Consensus 448 g~P~VVllHG~~g~~~~~-~~lA~----------------~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y 509 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENA-LAFAG----------------TLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAY 509 (792)
T ss_pred CCcEEEEeCCCCCCHHHH-HHHHH----------------HHHhCCcEEEEeCCC-CCCccccccccccccccccCccce
Confidence 358999999987777665 22211 111 23568999988 99988322 1 11 12
Q ss_pred cc--------cChHHHHHHHHHHHHHHH------H---HCCCCCCCcEEEEeeccccccHHHHHH
Q 012861 139 GS--------VNDAIAARDNLAFLEGWY------E---KFPEYKNREFFITGESYAGHYVPQLAQ 186 (455)
Q Consensus 139 ~~--------~~d~~~a~~~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvP~lA~ 186 (455)
-. .+-++...|++......- + .+..+...++++.|||.||.....++.
T Consensus 510 ~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 510 MNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred eccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 10 144566667665444322 1 123355679999999999999888874
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=90.94 E-value=0.64 Score=42.32 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=38.1
Q ss_pred CCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 164 YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 164 ~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+...+++|+|+|-||+.+..++..+.+.. ...++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 44679999999999999999998888753 2348999999999877
No 107
>PLN02454 triacylglycerol lipase
Probab=90.60 E-value=0.82 Score=46.19 Aligned_cols=64 Identities=20% Similarity=0.303 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc---cCCceeeEecCCCCCc
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM---KLNLKGIAIGNPLLEF 209 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~---~inLkGi~IGng~~dp 209 (455)
.+.+++...++...+++|..+ ..++|+|||.||-.+-..|..|..... .+++..+..|.|-+.-
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 456688889999999898753 369999999999999988888877532 2567778888877643
No 108
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.53 E-value=0.75 Score=42.77 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
++....++...+++| +.+++++|||.||-.+-.+|..+.++....+++.+..|.|-+.
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 344556666666666 5679999999999999888888877543456888888887763
No 109
>PRK10566 esterase; Provisional
Probab=90.33 E-value=0.61 Score=43.67 Aligned_cols=62 Identities=26% Similarity=0.357 Sum_probs=45.0
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
..++|+.+|..|.+++...++++.+.++.. +. ..+ +++.++.++||.+. |+ ++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~---------------------~~~-~~~~~~~~~~H~~~---~~-~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GL---------------------DKN-LTCLWEPGVRHRIT---PE-AL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CC---------------------Ccc-eEEEecCCCCCccC---HH-HH
Confidence 479999999999999999888887765321 10 013 88899999999975 43 45
Q ss_pred HHHHHHHcC
Q 012861 441 ALFNAFLGG 449 (455)
Q Consensus 441 ~m~~~fl~~ 449 (455)
+-+.+||..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 555557753
No 110
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=89.93 E-value=2 Score=50.72 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=67.7
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHH
Q 012861 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~ 151 (455)
.|-++.++|++|.+..+ ..+.+ .......++-+|.| |.|-+. . ..+ +-++.|+++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~----------------~l~~~~~v~~~~~~-g~~~~~--~-~~~---~l~~la~~~~ 1123 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSR----------------YLDPQWSIYGIQSP-RPDGPM--Q-TAT---SLDEVCEAHL 1123 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHH----------------hcCCCCcEEEEECC-CCCCCC--C-CCC---CHHHHHHHHH
Confidence 46689999999988776 33211 11234678889998 666431 1 111 5556676776
Q ss_pred HHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 152 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
..++. ..| ..|+.|.|+|+||.-+-.+|.++.++. ..+..+++.+++
T Consensus 1124 ~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~--~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1124 ATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG--EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC--CceeEEEEecCC
Confidence 66663 222 358999999999999999998886643 246666666653
No 111
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.84 E-value=0.91 Score=41.80 Aligned_cols=57 Identities=16% Similarity=0.036 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
++.+.+++....+.. ...++++|.|-|=||..+-.++....+ .+.|++..+|++-+.
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p~-----~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYPE-----PLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTSS-----TSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcCc-----CcCEEEEeecccccc
Confidence 334444444443322 556789999999999988888765444 699999999987553
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=89.20 E-value=0.74 Score=41.59 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=32.4
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccccc
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDF 213 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~~~ 213 (455)
...+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|...+
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~-------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY-------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh-------CCCE-EEEcCCCCHHHHH
Confidence 44599999999999999998755 3566 7889999996544
No 113
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=88.95 E-value=3.1 Score=42.82 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=60.6
Q ss_pred CCceEEEecCCccccCCccCC-----CCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHH
Q 012861 115 EANMLYLESPAGVGFSYSANK-----SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLII 189 (455)
Q Consensus 115 ~an~l~iDqPvG~GfSy~~~~-----~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 189 (455)
.|-||+++.- =-|-|..... -.| .+.+++.+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~y--Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRY--LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC---SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHh--cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 4557777765 5565553221 123 2577888899999999887776667789999999999987766655555
Q ss_pred HhcccCCceeeEecCCCCCccccchhhhH
Q 012861 190 QSNMKLNLKGIAIGNPLLEFNTDFNSRAE 218 (455)
Q Consensus 190 ~~n~~inLkGi~IGng~~dp~~~~~~~~~ 218 (455)
+ -+.|..--++.+....++..|.+
T Consensus 136 ~-----~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 136 H-----LFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp T-----T-SEEEEET--CCHCCTTTHHHH
T ss_pred C-----eeEEEEeccceeeeecccHHHHH
Confidence 5 36788888888877766655444
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=88.91 E-value=0.63 Score=44.59 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=56.4
Q ss_pred cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc
Q 012861 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (455)
Q Consensus 114 ~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 193 (455)
+-..+|.+|.. |+|-|.+.-... ....++|.++.+ +|+...| +.+-.+-++|-||+|......|..-..
T Consensus 56 ~GY~vV~~D~R-G~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~p--- 124 (272)
T PF02129_consen 56 RGYAVVVQDVR-GTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRPP--- 124 (272)
T ss_dssp TT-EEEEEE-T-TSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-T---
T ss_pred CCCEEEEECCc-ccccCCCccccC-----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCCC---
Confidence 45679999966 999998754321 333455665544 4666664 445589999999999988888863333
Q ss_pred cCCceeeEecCCCCCccc
Q 012861 194 KLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 194 ~inLkGi~IGng~~dp~~ 211 (455)
.||.|+...++.|...
T Consensus 125 --~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 125 --HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --TEEEEEEESE-SBTCC
T ss_pred --CceEEEecccCCcccc
Confidence 5999999988877743
No 115
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.54 E-value=0.95 Score=43.41 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=47.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
.+++++..|..|.++|..-.+++++.+. . -..+.+. +||+.+..+|+..-
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~----------------------------~-~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP----------------------------P-SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC----------------------------c-cEEEEEC-CCCCccccCHHHHH
Confidence 5899999999999999887776666221 1 2346675 99999999999999
Q ss_pred HHHHHHHcC
Q 012861 441 ALFNAFLGG 449 (455)
Q Consensus 441 ~m~~~fl~~ 449 (455)
++|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999987654
No 116
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=88.38 E-value=2.4 Score=43.31 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=29.1
Q ss_pred CcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 167 REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 167 ~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
....|+|.||||.-+-++|.+-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd-----~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE-----RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc-----cccEEEEeccce
Confidence 468999999999999888876666 378888888754
No 117
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=87.99 E-value=3.3 Score=36.89 Aligned_cols=77 Identities=13% Similarity=0.156 Sum_probs=48.8
Q ss_pred cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc
Q 012861 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (455)
Q Consensus 114 ~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 193 (455)
....++.+|.| |.|.+.... . +.+..++.....++ ...+ ..++.++|+|+||..+-.+|..+.++..
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~~-----~-~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~~ 90 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPLP-----A-SADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARGI 90 (212)
T ss_pred CCccEEEecCC-CCCCCCCCC-----C-CHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCCC
Confidence 45678999987 665442211 1 33334444444443 2333 5689999999999999999988876432
Q ss_pred cCCceeeEecCC
Q 012861 194 KLNLKGIAIGNP 205 (455)
Q Consensus 194 ~inLkGi~IGng 205 (455)
.++++++.+.
T Consensus 91 --~~~~l~~~~~ 100 (212)
T smart00824 91 --PPAAVVLLDT 100 (212)
T ss_pred --CCcEEEEEcc
Confidence 4667766654
No 118
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.75 E-value=3.5 Score=38.79 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=66.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
...+.+|+.+|-=.--+...-+| .+.|=.=..|+.=.|-- |-|.|-++.... ....| .+.
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~---------------~~l~~~ln~nv~~~DYS-GyG~S~G~psE~-n~y~D---i~a 117 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELF---------------KELSIFLNCNVVSYDYS-GYGRSSGKPSER-NLYAD---IKA 117 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHH---------------HHHhhcccceEEEEecc-cccccCCCcccc-cchhh---HHH
Confidence 34599999998711111111233 33444446788888976 999998876542 11123 334
Q ss_pred HHHHHHHHHHHCCCC-CCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 150 NLAFLEGWYEKFPEY-KNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.+++|++ ++ +..++.|+|.|-|..=.-.+| .+. .+.|+++-+|+++-
T Consensus 118 vye~Lr~------~~g~~~~Iil~G~SiGt~~tv~La----sr~---~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 118 VYEWLRN------RYGSPERIILYGQSIGTVPTVDLA----SRY---PLAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHh------hcCCCceEEEEEecCCchhhhhHh----hcC---CcceEEEeccchhh
Confidence 4777775 33 467999999999965422222 222 38999999999765
No 119
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=87.30 E-value=1.1 Score=41.34 Aligned_cols=59 Identities=25% Similarity=0.439 Sum_probs=40.9
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
+.+|++.+|+.|.++|....+...+.|+. .+ .+ ++|.+..+.||-++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~-~~-----------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA-AG-----------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC-TT------------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh-cC-----------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 68999999999999999988887776541 11 13 88899999999996 4556
Q ss_pred HHHHHHHc
Q 012861 441 ALFNAFLG 448 (455)
Q Consensus 441 ~m~~~fl~ 448 (455)
+.+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666764
No 120
>PF03283 PAE: Pectinacetylesterase
Probab=87.03 E-value=5.5 Score=39.93 Aligned_cols=139 Identities=19% Similarity=0.206 Sum_probs=74.7
Q ss_pred ceEEEEEEeccCCCCCCCEEEEECCCCCchhhh---hhhhccCCCCcc-----C-----CCcccccCCCcccCCceEEEe
Q 012861 56 RALFYYFVEAATEAASKPLVLWLNGGPGCSSIG---AGAFCEHGPFKP-----S-----GDTLLRNEYSWNKEANMLYLE 122 (455)
Q Consensus 56 ~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~---~g~f~E~GP~~~-----~-----~~~l~~n~~sw~~~an~l~iD 122 (455)
+.-.|++.+.. ....+-+||.|+||--|.+.. .-...+.|-..- . ...-..||.=+ ..|+|||
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v- 110 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV- 110 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE-
Confidence 34445555442 345689999999999998864 122234443321 1 12334565322 3667888
Q ss_pred cCCccccCCccCCCCccccChH----HHHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcc-cCC
Q 012861 123 SPAGVGFSYSANKSFYGSVNDA----IAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNM-KLN 196 (455)
Q Consensus 123 qPvG~GfSy~~~~~~~~~~~d~----~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~-~in 196 (455)
|=-+|=++.-+...... .+. .-.+.+.++|...... +++ ...+.|+|.|-||.=+..-+.++.+.=. ...
T Consensus 111 -pYC~Gd~~~G~~~~~~~-~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~ 186 (361)
T PF03283_consen 111 -PYCDGDSHSGDVEPVDY-GGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPSSVK 186 (361)
T ss_pred -EecCCccccCccccccc-CCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhccCce
Confidence 44444444222111100 110 1133334455555555 554 4589999999999988777777776422 244
Q ss_pred ceeeEe
Q 012861 197 LKGIAI 202 (455)
Q Consensus 197 LkGi~I 202 (455)
++++.=
T Consensus 187 v~~~~D 192 (361)
T PF03283_consen 187 VKCLSD 192 (361)
T ss_pred EEEecc
Confidence 444443
No 121
>COG0400 Predicted esterase [General function prediction only]
Probab=85.83 E-value=2 Score=39.49 Aligned_cols=60 Identities=27% Similarity=0.426 Sum_probs=44.0
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRS 439 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a 439 (455)
.+.||++.+|..|.+||..-+++..+.|+. .+. + ..+..+. .||.++.+ .
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~-~g~-----------------------~-v~~~~~~-~GH~i~~e----~ 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA-SGA-----------------------D-VEVRWHE-GGHEIPPE----E 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH-cCC-----------------------C-EEEEEec-CCCcCCHH----H
Confidence 579999999999999999999988886652 221 3 5556666 99999754 4
Q ss_pred HHHHHHHHcC
Q 012861 440 LALFNAFLGG 449 (455)
Q Consensus 440 ~~m~~~fl~~ 449 (455)
++.+++|+.+
T Consensus 195 ~~~~~~wl~~ 204 (207)
T COG0400 195 LEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHh
Confidence 4555556654
No 122
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=85.74 E-value=1.2 Score=46.87 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccC----------CceEEEecCCccccCCccCCCCcc
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE----------ANMLYLESPAGVGFSYSANKSFYG 139 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~----------an~l~iDqPvG~GfSy~~~~~~~~ 139 (455)
+.-|+++.+-||||. .++.|.++|.+. .=|++||.- |+- . ..-.+.
T Consensus 640 kkYptvl~VYGGP~V-------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~---h-RGlkFE 695 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSA---H-RGLKFE 695 (867)
T ss_pred CCCceEEEEcCCCce-------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Ccc---c-cchhhH
Confidence 447999999999984 344588888652 236899955 321 1 110110
Q ss_pred c----cChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccc
Q 012861 140 S----VNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 140 ~----~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~ 211 (455)
. .--...++|-++-||-.-.+.--..-..+-|-|-||||....+...+-.+ -++-.+-|.|++++..
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~-----IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN-----IFRVAIAGAPVTDWRL 766 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc-----eeeEEeccCcceeeee
Confidence 0 00111133445555544444322223468999999999876554332222 2567777889988853
No 123
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=85.39 E-value=7.6 Score=37.20 Aligned_cols=103 Identities=22% Similarity=0.299 Sum_probs=66.1
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCc--eEEEecCCccccCCccCCCCccccChHHH
Q 012861 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEAN--MLYLESPAGVGFSYSANKSFYGSVNDAIA 146 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an--~l~iDqPvG~GfSy~~~~~~~~~~~d~~~ 146 (455)
.+...+||=++|-||+-==+ =. --++...++ +|=|--| |-|++-......|. +.
T Consensus 32 gs~~gTVv~~hGsPGSH~DF-kY-----------------i~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~~--n~--- 87 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDF-KY-----------------IRPPLDEAGIRFIGINYP-GFGFTPGYPDQQYT--NE--- 87 (297)
T ss_pred CCCceeEEEecCCCCCccch-hh-----------------hhhHHHHcCeEEEEeCCC-CCCCCCCCcccccC--hH---
Confidence 34456899999999976543 11 122333333 5667779 76766554443442 33
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+-..|.+.++..- +++ ..+.+.|+|-|+--+..+|... .+.|+++.||.
T Consensus 88 --er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-------~~~g~~lin~~ 136 (297)
T PF06342_consen 88 --ERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-------PLHGLVLINPP 136 (297)
T ss_pred --HHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-------ccceEEEecCC
Confidence 2345666666654 343 5788889999999888888655 36799998875
No 124
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=84.92 E-value=2.1 Score=40.06 Aligned_cols=60 Identities=8% Similarity=0.118 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc----CCceeeEecCCCCCc
Q 012861 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK----LNLKGIAIGNPLLEF 209 (455)
Q Consensus 147 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~----inLkGi~IGng~~dp 209 (455)
+..+..||+...+.. ..++++|.+||.|+.-+-.....+...... -.|..|++.+|-+|.
T Consensus 76 ~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 76 GPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 444444554433321 367899999999999888877777765431 467888988888776
No 125
>PLN02571 triacylglycerol lipase
Probab=84.10 E-value=3.3 Score=41.96 Aligned_cols=63 Identities=16% Similarity=0.147 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhc---------ccCCceeeEecCCCCC
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN---------MKLNLKGIAIGNPLLE 208 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n---------~~inLkGi~IGng~~d 208 (455)
.+.++++..|+.+.+++|.. ..+++|+|||.||-.+-..|..|.... ..+++..+..|.|-+.
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 34457788888888888764 347999999999999988888886531 1145666777776654
No 126
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=84.03 E-value=3.8 Score=42.15 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=24.5
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHH
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQL 184 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 184 (455)
++++++..+.|-. -...+-|+|||-|++-|-.+
T Consensus 165 LkWV~~NIe~FGG-Dp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGG-DPQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCC-CccceEEeeccchHHHHHHh
Confidence 6677788887743 24579999999998866543
No 127
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=83.96 E-value=3.3 Score=40.69 Aligned_cols=93 Identities=20% Similarity=0.214 Sum_probs=55.0
Q ss_pred CCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-----cCCceEEEecCCccccCCccCCCCcccc
Q 012861 67 TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-----KEANMLYLESPAGVGFSYSANKSFYGSV 141 (455)
Q Consensus 67 ~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-----~~an~l~iDqPvG~GfSy~~~~~~~~~~ 141 (455)
.+++++-.+|+.||--+|=-.. ..+ ..-...|. ..+|++..--| |||+|.+..+
T Consensus 132 ~~a~~~RWiL~s~GNg~~~E~~-~~~-------------~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~s------ 190 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGECYENR-AML-------------DYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPPS------ 190 (365)
T ss_pred CCCCCCcEEEEEcCChHHhhhh-hhh-------------ccccHHHHHHHHHcCCcEEEECCC-ccccCCCCCC------
Confidence 3567889999999763322221 111 00122332 47899999988 9999976542
Q ss_pred ChHHHHHHHHHHHHHHHHHCC-CCCCCcEEEEeeccccccHH
Q 012861 142 NDAIAARDNLAFLEGWYEKFP-EYKNREFFITGESYAGHYVP 182 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~yvP 182 (455)
-++.+++ +.++-+++...+ .-+.+.+.+.|+|-||--..
T Consensus 191 -~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 191 -RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred -HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 1222222 233444444332 23567899999999997544
No 128
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.56 E-value=8.3 Score=36.66 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=63.7
Q ss_pred CEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHHHH
Q 012861 73 PLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (455)
Q Consensus 73 Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~ 152 (455)
|.+++++++=|.-..+..+-.+.+| ..-++-++.| |.|. .... .. +-++.|+...+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------~~~v~~l~a~-g~~~--~~~~--~~--~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------LLPVYGLQAP-GYGA--GEQP--FA--SLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------CceeeccccC-cccc--cccc--cC--CHHHHHHHHHH
Confidence 5789999887765443122222232 2345667777 4432 1111 11 44555656666
Q ss_pred HHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 153 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
.|+ +..|+ -|.+|.|.|+||.-+=.+|.+|..+.. .+.-++|.|...
T Consensus 57 ~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~--~Va~L~llD~~~ 103 (257)
T COG3319 57 AIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE--EVAFLGLLDAVP 103 (257)
T ss_pred HHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC--eEEEEEEeccCC
Confidence 665 56775 399999999999999999999998653 244455555443
No 129
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=83.50 E-value=0.34 Score=47.93 Aligned_cols=105 Identities=17% Similarity=0.261 Sum_probs=56.8
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-cCCceEEEecCCccccCCccCCCCccccChHHHH
Q 012861 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAA 147 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a 147 (455)
..++|++|.++|=-+..+.. .-+. .+..+-.... ...|||.||--.+..-.|... ..+...++
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~----------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~vg 131 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ----------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRLVG 131 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH----------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH----------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHHHH
Confidence 35789999999865555111 0000 1111112221 468999999655544333211 11345566
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
+.+-.||+...... .+...+++|+|+|.|+|-+-.+++++..
T Consensus 132 ~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 132 RQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 66667777666432 2335689999999999988777777766
No 130
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=83.40 E-value=3.1 Score=37.61 Aligned_cols=62 Identities=32% Similarity=0.446 Sum_probs=43.6
Q ss_pred HhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcH
Q 012861 358 AKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPR 437 (455)
Q Consensus 358 L~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~ 437 (455)
.....++++..|+.|.+.+....+.+.+.+ . . . ..++++.++||+...++|+
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~----~---------------------~--~-~~~~~~~~~gH~~~~~~p~ 269 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAAL----P---------------------N--D-ARLVVIPGAGHFPHLEAPE 269 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhC----C---------------------C--C-ceEEEeCCCCCcchhhcHH
Confidence 345799999999999555554433333211 0 0 1 5678999999999999999
Q ss_pred HHHHHHHHHH
Q 012861 438 RSLALFNAFL 447 (455)
Q Consensus 438 ~a~~m~~~fl 447 (455)
...+.+..|+
T Consensus 270 ~~~~~i~~~~ 279 (282)
T COG0596 270 AFAAALLAFL 279 (282)
T ss_pred HHHHHHHHHH
Confidence 8877777654
No 131
>COG0400 Predicted esterase [General function prediction only]
Probab=83.34 E-value=5.6 Score=36.51 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
..++.+.+||....+.+ ....+++++.|-|=|+.++.++.....+ .++|+++-.|..-+.
T Consensus 78 ~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~~~-----~~~~ail~~g~~~~~ 137 (207)
T COG0400 78 LETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTLPG-----LFAGAILFSGMLPLE 137 (207)
T ss_pred HHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhCch-----hhccchhcCCcCCCC
Confidence 34556677888777766 3446799999999999998888776665 589999998887554
No 132
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=82.73 E-value=2.7 Score=43.26 Aligned_cols=41 Identities=20% Similarity=0.126 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHH
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL 187 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 187 (455)
+...+++.+.++..++..+ .+++.|.|||.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 3445677778888777654 5799999999999888776653
No 133
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=82.73 E-value=2.3 Score=38.90 Aligned_cols=43 Identities=21% Similarity=0.277 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
+-.|+.++.+.|++.+++ +|||+|+|||=|+..+-.|.+...+
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 445778888889998875 8999999999999887776665444
No 134
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=82.59 E-value=2.3 Score=35.69 Aligned_cols=46 Identities=37% Similarity=0.510 Sum_probs=34.1
Q ss_pred HHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccc
Q 012861 357 LAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHE 430 (455)
Q Consensus 357 LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHm 430 (455)
+-...++|++..|+.|.+++....+++.+++. .+ -.+..|.|+||+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---------------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---------------------------SS-EEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---------------------------CC-cEEEEeCCCcCc
Confidence 33567899999999999998888888777441 03 566899999996
No 135
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.15 E-value=2.1 Score=40.00 Aligned_cols=39 Identities=28% Similarity=0.464 Sum_probs=25.9
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHH
Q 012861 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 185 (455)
+.+++.+.=++|++++. | +++++||.|+|=|...+-.+.
T Consensus 90 sL~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred chhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHHHHHHHh
Confidence 33444556667887654 3 378999999999866554433
No 136
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=80.17 E-value=16 Score=33.96 Aligned_cols=123 Identities=13% Similarity=0.060 Sum_probs=60.4
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHH
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDN 150 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~ 150 (455)
+...||+++|--|+.... --+...- . .+. ....+....++.-+|-+- ....+....-...++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~-rsl~~~~----~-~~~--~~~~~~~~~d~ft~df~~--------~~s~~~g~~l~~q~~~~ 66 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV-RSLASEL----Q-RKA--LLNDNSSHFDFFTVDFNE--------ELSAFHGRTLQRQAEFL 66 (225)
T ss_pred CCCEEEEECcCCCCHhHH-HHHHHHH----h-hhh--hhccCccceeEEEeccCc--------cccccccccHHHHHHHH
Confidence 356789999988887764 2221100 0 000 011122335566666331 11111110122334445
Q ss_pred HHHHHHHHHHC--CCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeE-ecCCCCCccc
Q 012861 151 LAFLEGWYEKF--PEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIA-IGNPLLEFNT 211 (455)
Q Consensus 151 ~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~-IGng~~dp~~ 211 (455)
.+.++...+.+ ..-..+++.|.|||.||.-+-.++. .... ..-++++|+ ++.|...+..
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~-~~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNY-DPDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-cccc-ccccEEEEEEEcCCCCCccc
Confidence 55555555544 1224679999999999974433332 2221 112455554 7777776643
No 137
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=80.08 E-value=4.2 Score=40.07 Aligned_cols=46 Identities=24% Similarity=0.358 Sum_probs=35.3
Q ss_pred HHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 156 GWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 156 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
.|+...|+.-.+.+.++|+|-||...-.+|. +.+ .++.++...|++
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~-----rv~~~~~~vP~l 209 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP-----RVKAAAADVPFL 209 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS-----T-SEEEEESESS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc-----cccEEEecCCCc
Confidence 4677889998899999999999997766664 433 388888877764
No 138
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=77.82 E-value=1.8 Score=39.30 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=51.7
Q ss_pred ccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCC
Q 012861 126 GVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (455)
Q Consensus 126 G~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng 205 (455)
-+||-+++... ..+++-.++..+++-.++.+|.- +.+-+.|+|-|.|.+..+..++.+ -.+.|+++-+|
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~----prI~gl~l~~G 170 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS----PRIWGLILLCG 170 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC----chHHHHHHHhh
Confidence 56766665432 45666778888888777888753 359999999999988777777544 24677777777
Q ss_pred CCCc
Q 012861 206 LLEF 209 (455)
Q Consensus 206 ~~dp 209 (455)
+-+-
T Consensus 171 vY~l 174 (270)
T KOG4627|consen 171 VYDL 174 (270)
T ss_pred HhhH
Confidence 6443
No 139
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=76.43 E-value=3.8 Score=36.87 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=50.9
Q ss_pred eEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCc
Q 012861 118 MLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNL 197 (455)
Q Consensus 118 ~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inL 197 (455)
.|-.|-- |||-|.++-..+. .+.+-|+...+++| +++|+-. -++|.|-|+|+..+-.+|.+..+ .
T Consensus 63 tlRfNfR-gVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e------~ 127 (210)
T COG2945 63 TLRFNFR-GVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE------I 127 (210)
T ss_pred EEeeccc-ccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc------c
Confidence 3444544 9999988766554 33333444455665 5788643 36999999999888888887766 4
Q ss_pred eeeEecCCCCC
Q 012861 198 KGIAIGNPLLE 208 (455)
Q Consensus 198 kGi~IGng~~d 208 (455)
.+.+...+.++
T Consensus 128 ~~~is~~p~~~ 138 (210)
T COG2945 128 LVFISILPPIN 138 (210)
T ss_pred cceeeccCCCC
Confidence 56666666665
No 140
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=76.33 E-value=33 Score=33.76 Aligned_cols=127 Identities=20% Similarity=0.271 Sum_probs=71.6
Q ss_pred EEEeccCCCceEEEEEEeccCCCCCCCEEEEECCCCCchhhh-----hhhhccCCCCccCCCcccccCCCcccCCceEEE
Q 012861 47 YITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIG-----AGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYL 121 (455)
Q Consensus 47 yl~v~~~~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~-----~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~i 121 (455)
-|..++ .+--.+.|... ......|++|-++|==|.|.-- ...+.+- -..++-.
T Consensus 53 ~v~~pd-g~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~r-------------------g~~~Vv~ 110 (345)
T COG0429 53 RLETPD-GGFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRR-------------------GWLVVVF 110 (345)
T ss_pred EEEcCC-CCEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhc-------------------CCeEEEE
Confidence 444432 34456667542 1234559999999977766542 1222222 2345666
Q ss_pred ecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccC-Cceee
Q 012861 122 ESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL-NLKGI 200 (455)
Q Consensus 122 DqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~i-nLkGi 200 (455)
+-- |.|.+-.....-| ++..+ +|+..||..-.+++| .+++|.+|-|.||. .+|.++-+..+.. ...++
T Consensus 111 ~~R-gcs~~~n~~p~~y---h~G~t-~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d~~~~aa~ 179 (345)
T COG0429 111 HFR-GCSGEANTSPRLY---HSGET-EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDDLPLDAAV 179 (345)
T ss_pred ecc-cccCCcccCccee---cccch-hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccCcccceee
Confidence 644 6665554333333 22222 355555544445666 68999999999995 4577777765553 34555
Q ss_pred EecCCC
Q 012861 201 AIGNPL 206 (455)
Q Consensus 201 ~IGng~ 206 (455)
++-+|+
T Consensus 180 ~vs~P~ 185 (345)
T COG0429 180 AVSAPF 185 (345)
T ss_pred eeeCHH
Confidence 555554
No 141
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=75.92 E-value=6.3 Score=36.61 Aligned_cols=64 Identities=22% Similarity=0.220 Sum_probs=40.1
Q ss_pred cCCceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccH
Q 012861 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYV 181 (455)
Q Consensus 114 ~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 181 (455)
.-..||-.|-- |.|-|.....+.....=-+-+-.|+-..|...-+.-| ..|+|..|+||||+-.
T Consensus 56 ~Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~ 119 (281)
T COG4757 56 AGFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQAL 119 (281)
T ss_pred cCceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceee
Confidence 44578888977 9999986655432210112233355555544334444 6899999999999944
No 142
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=75.74 E-value=11 Score=28.73 Aligned_cols=78 Identities=19% Similarity=0.138 Sum_probs=46.1
Q ss_pred ceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCC
Q 012861 56 RALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANK 135 (455)
Q Consensus 56 ~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~ 135 (455)
..||+..++..+. .+.+|+.++|--..|..+ .-+.+ .| +. +-.+|+-+|+. |.|.|-+...
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~ry-~~~a~---------~L--~~----~G~~V~~~D~r-GhG~S~g~rg 62 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGRY-AHLAE---------FL--AE----QGYAVFAYDHR-GHGRSEGKRG 62 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHHH-HHHHH---------HH--Hh----CCCEEEEECCC-cCCCCCCccc
Confidence 4577755544332 589999999875555443 33311 11 11 34568889988 9999975332
Q ss_pred CCccccChHHHHHHHHHHHH
Q 012861 136 SFYGSVNDAIAARDNLAFLE 155 (455)
Q Consensus 136 ~~~~~~~d~~~a~~~~~fL~ 155 (455)
+.. +-++..+|+..|++
T Consensus 63 --~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 63 --HID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred --ccC-CHHHHHHHHHHHhC
Confidence 222 44556667766653
No 143
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=75.17 E-value=5.4 Score=40.21 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCC-CcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccc
Q 012861 143 DAIAARDNLAFLEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 143 d~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~ 211 (455)
--.+|.|...+|..-.+.+|.... .|+.+.|.||||. ...++.+|.=. .+.||+=-++|.-|..
T Consensus 159 GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~aP~----~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 159 GIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIAPW----LFDGVIDNSSYALPPL 223 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhCcc----ceeEEEecCccccchh
Confidence 346788999999998899999975 7999999999985 45555555442 3667766666666643
No 144
>PLN02310 triacylglycerol lipase
Probab=73.97 E-value=8 Score=39.16 Aligned_cols=62 Identities=16% Similarity=0.137 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHCCC-CCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 146 AARDNLAFLEGWYEKFPE-YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+.+++...++...+.+++ -....+.|+|||.||-.+--.|..|......+++.-+..|.|-+
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 344566677777766653 12457999999999999988887776533334555556666554
No 145
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=73.71 E-value=4.6 Score=38.04 Aligned_cols=60 Identities=18% Similarity=0.282 Sum_probs=43.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
..+|||++|..|-++|+....+.-+..+ . . .....|+||||--..--|+ -.
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k--------~----------------~----~epl~v~g~gH~~~~~~~~-yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK--------E----------------K----VEPLWVKGAGHNDIELYPE-YI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc--------c----------------c----CCCcEEecCCCcccccCHH-HH
Confidence 4699999999999999988877666221 0 1 3347899999998877664 45
Q ss_pred HHHHHHHcC
Q 012861 441 ALFNAFLGG 449 (455)
Q Consensus 441 ~m~~~fl~~ 449 (455)
+.+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 555667653
No 146
>PLN02753 triacylglycerol lipase
Probab=73.69 E-value=9.5 Score=39.77 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHHHHHHCCC--CCCCcEEEEeeccccccHHHHHHHHHHhc--c-----cCCceeeEecCCCC
Q 012861 143 DAIAARDNLAFLEGWYEKFPE--YKNREFFITGESYAGHYVPQLAQLIIQSN--M-----KLNLKGIAIGNPLL 207 (455)
Q Consensus 143 d~~~a~~~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~n--~-----~inLkGi~IGng~~ 207 (455)
...+.++++..++...+++|. .....++|+|||.||-.+--.|..|.... . .+++.-+..|.|=+
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 344566788889998888864 23468999999999999999988887631 1 14455556665554
No 147
>PLN02719 triacylglycerol lipase
Probab=73.11 E-value=9.3 Score=39.72 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHCCCC--CCCcEEEEeeccccccHHHHHHHHHHhc--c-----cCCceeeEecCCCC
Q 012861 145 IAARDNLAFLEGWYEKFPEY--KNREFFITGESYAGHYVPQLAQLIIQSN--M-----KLNLKGIAIGNPLL 207 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~--~~~~~yi~GESYgG~yvP~lA~~i~~~n--~-----~inLkGi~IGng~~ 207 (455)
.+.++++..|+...+++|.. ....+.|+|||.||-.+--.|..|.+.. + .+++.-+..|.|=+
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 34567788899888888864 3457999999999999999998887641 1 13444555555544
No 148
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=71.70 E-value=7.6 Score=35.27 Aligned_cols=106 Identities=20% Similarity=0.154 Sum_probs=65.2
Q ss_pred CCceEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCcc
Q 012861 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 54 ~~~~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~ 133 (455)
++..|.|.=+- . -+--||.+-|--||+-..+ +|-..+ .++ -. ...|+-+|+| |-|-|...
T Consensus 29 ng~ql~y~~~G--~---G~~~iLlipGalGs~~tDf------~pql~~-----l~k--~l-~~TivawDPp-GYG~SrPP 88 (277)
T KOG2984|consen 29 NGTQLGYCKYG--H---GPNYILLIPGALGSYKTDF------PPQLLS-----LFK--PL-QVTIVAWDPP-GYGTSRPP 88 (277)
T ss_pred cCceeeeeecC--C---CCceeEecccccccccccC------CHHHHh-----cCC--CC-ceEEEEECCC-CCCCCCCC
Confidence 45667775322 1 2356788899999988862 221111 010 01 1678999966 99999865
Q ss_pred CCCCccc---cChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 134 NKSFYGS---VNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 134 ~~~~~~~---~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
+.. +.. ..|.+.|-|+.++|+ -.+|-|.|-|=||.-+-..|.+-.+
T Consensus 89 ~Rk-f~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~~e 137 (277)
T KOG2984|consen 89 ERK-FEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKGKE 137 (277)
T ss_pred ccc-chHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccChh
Confidence 432 211 135566667776664 4589999999999977666554333
No 149
>PLN02408 phospholipase A1
Probab=70.42 E-value=13 Score=37.14 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHh
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 191 (455)
.+.+++.+-++...+++|.. ...++|+|||.||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 34456777888888888864 34699999999999998888888764
No 150
>PLN02802 triacylglycerol lipase
Probab=70.17 E-value=11 Score=39.16 Aligned_cols=61 Identities=13% Similarity=0.142 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc-CCceeeEecCCCC
Q 012861 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGIAIGNPLL 207 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~-inLkGi~IGng~~ 207 (455)
+.++++.-++.+++++|.- ...++|+|||.||-.+-..|..|...... +.+.-+..|.|-+
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRV 371 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRV 371 (509)
T ss_pred HHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCc
Confidence 4456777788888877642 24799999999999999888888764322 2344455555444
No 151
>PLN02847 triacylglycerol lipase
Probab=70.07 E-value=11 Score=39.87 Aligned_cols=57 Identities=12% Similarity=0.254 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecC-CCCCc
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN-PLLEF 209 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGn-g~~dp 209 (455)
+...|++-++.+|.| ++.|+|||.||--+.-++..|.++....++..+..|- |++++
T Consensus 237 i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 237 STPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFAPAACMTW 294 (633)
T ss_pred HHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEecCchhcCH
Confidence 334555556668765 6999999999997766665554332235677777775 34444
No 152
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=69.98 E-value=21 Score=36.86 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccccchhh
Q 012861 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFNSR 216 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~~~~~~ 216 (455)
+.+++..|+..|++..-.+|+.-.+.|++.+|-||.|....=+=....+. +-|-+--++-+....++..|
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel-----~~GsvASSapv~A~~DF~EY 216 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL-----TVGSVASSAPVLAKVDFYEY 216 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh-----heeecccccceeEEecHHHH
Confidence 56677779999999888889776666999999999998665555544442 34555555555555555443
No 153
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=69.47 E-value=9.9 Score=38.91 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=43.8
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSL 440 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~a~ 440 (455)
.++||+.+|..|.++|....+.+.+.. .+ ..++.+.++ |+ .++|+.++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~----------------------------~~-~~l~~i~~~-~~--~e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS----------------------------AD-GKLLEIPFK-PV--YRNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEccCC-Cc--cCCHHHHH
Confidence 579999999999999999888665411 12 445777876 33 36999999
Q ss_pred HHHHHHHcC
Q 012861 441 ALFNAFLGG 449 (455)
Q Consensus 441 ~m~~~fl~~ 449 (455)
..+..||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999864
No 154
>PLN02324 triacylglycerol lipase
Probab=69.35 E-value=15 Score=37.36 Aligned_cols=46 Identities=15% Similarity=0.057 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHh
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 191 (455)
.+-++++..|+...+++|.. ...+.|+|||.||-.+--.|..|...
T Consensus 194 SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 34556778888888888753 34799999999999998888888763
No 155
>PLN00413 triacylglycerol lipase
Probab=68.43 E-value=6.5 Score=40.47 Aligned_cols=39 Identities=21% Similarity=0.441 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
++...|++.++.+|. .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 456677888888874 469999999999998888876653
No 156
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=67.82 E-value=25 Score=32.73 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc--CCceeeEecCCC
Q 012861 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPL 206 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~--inLkGi~IGng~ 206 (455)
+-++.++.+.+.++.+.. ..+++.|+|.|-|+.-+-..+.++.+.... =++..+.+|||-
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 344556667777776554 478999999999998887777777774332 468899999975
No 157
>PLN02761 lipase class 3 family protein
Probab=67.57 E-value=16 Score=38.12 Aligned_cols=46 Identities=20% Similarity=0.100 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCCcEEEEeeccccccHHHHHHHHHH
Q 012861 145 IAARDNLAFLEGWYEKFPEY---KNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~---~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
.+.++++..++...+.+|.. ....++|+|||.||-.+--.|..|..
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 34557788888888888532 23469999999999999888888875
No 158
>PRK04940 hypothetical protein; Provisional
Probab=67.53 E-value=8.4 Score=34.45 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=31.0
Q ss_pred CcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccccc
Q 012861 167 REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDF 213 (455)
Q Consensus 167 ~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~~~ 213 (455)
.++.|+|-|-||.|+-.+|.+. .++. +|.||.+.|...+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------g~~a-VLiNPAv~P~~~L 98 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------GIRQ-VIFNPNLFPEENM 98 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------CCCE-EEECCCCChHHHH
Confidence 4789999999999999999764 3544 5679999996543
No 159
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=67.49 E-value=10 Score=34.90 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=36.2
Q ss_pred HHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 156 GWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 156 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
+|++.+|+...+++-|.|-|.||-.+..+|.++.+ ++.++..+|.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~------i~avVa~~ps 55 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ------ISAVVAISPS 55 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS------EEEEEEES--
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC------ccEEEEeCCc
Confidence 57788999988999999999999999999988765 8888877765
No 160
>PRK14567 triosephosphate isomerase; Provisional
Probab=67.41 E-value=15 Score=34.75 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.+.+++.+.++++++.++-+-....+=|. |||---|.=+..|++.. ++.|+.||.+.++|.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~---diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP---DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC---CCCEEEeehhhhcHH
Confidence 34567888999998876421111122222 99999999999998864 599999999998873
No 161
>PLN03037 lipase class 3 family protein; Provisional
Probab=66.39 E-value=14 Score=38.42 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHCCCC-CCCcEEEEeeccccccHHHHHHHHHHh
Q 012861 148 RDNLAFLEGWYEKFPEY-KNREFFITGESYAGHYVPQLAQLIIQS 191 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~ 191 (455)
++++.-++...+.+++. ....++|+|||.||-.+--.|..|...
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 45666777777777642 245799999999999998888777764
No 162
>PRK14566 triosephosphate isomerase; Provisional
Probab=65.95 E-value=16 Score=34.81 Aligned_cols=59 Identities=20% Similarity=0.297 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+.|++++.||++++...-.-....+=|. |||---|.=+..|.++. ++.|+.||..-++|
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---dIDG~LVGgASL~~ 247 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP---DVDGGLIGGASLNS 247 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC---CCCeEEechHhcCH
Confidence 3467889999998875311111122222 99999999999998875 59999999988887
No 163
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=65.62 E-value=12 Score=33.77 Aligned_cols=62 Identities=10% Similarity=0.221 Sum_probs=48.7
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+-+++|.|+-..++.+.++. ..+.+.|+|-|+|.--+|.+..+|...- +=.++++.+..+-.
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~-r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL-RARVAQVVLLSPST 107 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH-HhheeEEEEeccCC
Confidence 57788999999998888754 4789999999999999999999887642 12477777766543
No 164
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=64.42 E-value=17 Score=33.75 Aligned_cols=50 Identities=20% Similarity=0.251 Sum_probs=33.9
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCC
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng 205 (455)
.++++...+.+++ +++|+|||=||..+-+.|..+.+... -.++.+..-||
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~-~rI~~vy~fDg 121 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ-DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh-hheeEEEEeeC
Confidence 4667776666654 59999999999999998887544211 12455555443
No 165
>COG0627 Predicted esterase [General function prediction only]
Probab=64.05 E-value=20 Score=35.19 Aligned_cols=128 Identities=18% Similarity=0.170 Sum_probs=71.3
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccC--CC---cccccCCCcccCCceEEEecCCccccCCccCCCCccccChHH
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS--GD---TLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAI 145 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~--~~---~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~ 145 (455)
++.-|+|+.+|..|..- .+.+.++++-. .. ...++-.-+....++--|+ |+|.|.|+=.+-.. ......
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~-~~~~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQ-PPWASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceeccccc-CccccC-
Confidence 33334444557777741 22333444422 11 1222234455566666677 68999987433211 000000
Q ss_pred HHHHHHHHHH-----HHHHHCCCCCC-CcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 146 AARDNLAFLE-----GWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 146 ~a~~~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
..+...||. .+.+.||.-++ ..-.|+|+|.||+=+-.+|.+-.++ ++.++=-+|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-----f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-----FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-----hceecccccccccc
Confidence 123333332 45566664332 2578999999999988888776553 77888888888886
No 166
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=62.74 E-value=94 Score=34.25 Aligned_cols=41 Identities=12% Similarity=-0.003 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHHHHH---CCCCC---CCcEEEEeeccccccHHH
Q 012861 143 DAIAARDNLAFLEGWYEK---FPEYK---NREFFITGESYAGHYVPQ 183 (455)
Q Consensus 143 d~~~a~~~~~fL~~f~~~---fp~~~---~~~~yi~GESYgG~yvP~ 183 (455)
-.+.++-+.++++..++. -+|+. ...+.|.||||||.-+-.
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 445677777777655543 34555 556999999999985543
No 167
>PLN02934 triacylglycerol lipase
Probab=62.05 E-value=11 Score=39.13 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
.+...|+++.+++|. .+++++|||-||-.+-.+|..|..
T Consensus 306 ~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 456678888888885 469999999999988888766654
No 168
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=61.77 E-value=74 Score=30.30 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=29.7
Q ss_pred HHHHHHHH----HHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 148 RDNLAFLE----GWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 148 ~~~~~fL~----~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
..+.+||. -|.+. ++- ...+--|+|+||||-.+-. .|++..+ -+.-+.+++|-
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~-~~~~~~i~GhSlGGLfvl~---aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRT-NSERTAIIGHSLGGLFVLF---ALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHHHHHHHHhhHHHHhccccc-CcccceeeeecchhHHHHH---HHhcCcc--hhceeeeecch
Confidence 34555554 45554 433 3345899999999998744 3444322 14445555543
No 169
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=61.61 E-value=18 Score=35.85 Aligned_cols=55 Identities=25% Similarity=0.348 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhccc--CCceeeEecCCC
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPL 206 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~--inLkGi~IGng~ 206 (455)
.+.+-++.....+| +..++++|+|-||-++.-.|..|...... ..++=+--|-|-
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 34444555556677 56799999999999999999999986432 344444445443
No 170
>PLN02162 triacylglycerol lipase
Probab=61.42 E-value=12 Score=38.59 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
.+.+.|+..++++|. .+++++|||.||-.+--.|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 445567777777774 569999999999988777766554
No 171
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=60.65 E-value=5.9 Score=36.45 Aligned_cols=49 Identities=20% Similarity=0.328 Sum_probs=27.3
Q ss_pred cCceEEEEecCCccccCchhH-HHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCcccc
Q 012861 360 SGIRVLVYSGDQDSVLPLTGT-RTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEA 431 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~-~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmv 431 (455)
.+-+||+.+|..|.+-|..-. +..+++|+. .+. .+ + ++.+...+|||++
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~-~~~--------------------~~-~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKA-AGF--------------------PH-N-VEHLSYPGAGHLI 163 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHC-TT---------------------------EEEEETTB-S--
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHH-hCC--------------------CC-c-ceEEEcCCCCcee
Confidence 378999999999999886554 444555531 111 11 3 7788899999996
No 172
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=59.36 E-value=23 Score=35.36 Aligned_cols=128 Identities=21% Similarity=0.301 Sum_probs=75.5
Q ss_pred eEEEEEEe-ccCC-CC-CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc--cCCceEEEecCCccccCC
Q 012861 57 ALFYYFVE-AATE-AA-SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN--KEANMLYLESPAGVGFSY 131 (455)
Q Consensus 57 ~lfy~~~e-s~~~-~~-~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~--~~an~l~iDqPvG~GfSy 131 (455)
.++|.-.. ++.+ .+ -.| +|.++|=||+=-.+ .-.=|+.-+ ++.++=. -...||-=-.| |-|||.
T Consensus 135 ~iHFlhvk~p~~k~~k~v~P-lLl~HGwPGsv~EF----ykfIPlLT~-----p~~hg~~~d~~FEVI~PSlP-GygwSd 203 (469)
T KOG2565|consen 135 KIHFLHVKPPQKKKKKKVKP-LLLLHGWPGSVREF----YKFIPLLTD-----PKRHGNESDYAFEVIAPSLP-GYGWSD 203 (469)
T ss_pred eEEEEEecCCccccCCcccc-eEEecCCCchHHHH----HhhhhhhcC-----ccccCCccceeEEEeccCCC-CcccCc
Confidence 56765432 2221 22 235 45689999955443 111233222 1222222 13455655556 999999
Q ss_pred ccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 132 SANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 132 ~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.....++ +..++|+-+.+.+- ++.-++|||=|--||-....-+|.-..+ |+.|+=+-...++|.
T Consensus 204 ~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe-----nV~GlHlnm~~~~s~ 267 (469)
T KOG2565|consen 204 APSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE-----NVLGLHLNMCFVNSP 267 (469)
T ss_pred CCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcch-----hhhHhhhcccccCCc
Confidence 8777766 77777876665443 3445789998877887776667766666 577776666666554
No 173
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=57.64 E-value=19 Score=33.11 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN 192 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 192 (455)
+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++-+....+.+.+
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 445667777777777665442 469999999999999988777777654
No 174
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=56.75 E-value=10 Score=30.11 Aligned_cols=16 Identities=19% Similarity=0.252 Sum_probs=10.1
Q ss_pred CcchhHHHHHHHHHHH
Q 012861 1 MGLKQWIIIVSALFCT 16 (455)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (455)
|++|++|.+.++|.++
T Consensus 1 MaSK~~llL~l~LA~l 16 (95)
T PF07172_consen 1 MASKAFLLLGLLLAAL 16 (95)
T ss_pred CchhHHHHHHHHHHHH
Confidence 8877777765554333
No 175
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=56.56 E-value=22 Score=33.77 Aligned_cols=63 Identities=17% Similarity=0.332 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHH-HHCC-----CCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCC
Q 012861 143 DAIAARDNLAFLEGWY-EKFP-----EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (455)
Q Consensus 143 d~~~a~~~~~fL~~f~-~~fp-----~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~ 207 (455)
+.+.++++.++|.+=+ +..| ++ ..+.|+|||=||+-+-.+|....+....+++++++..+|+=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 4445556666655411 1222 32 35999999999995554444432222236899999988875
No 176
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=56.37 E-value=21 Score=31.60 Aligned_cols=42 Identities=19% Similarity=0.362 Sum_probs=32.1
Q ss_pred ceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCcccccc
Q 012861 362 IRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPL 433 (455)
Q Consensus 362 irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~ 433 (455)
++.+++.++.|..|++.-++.+.+.+ + ..++.+.++||+-..
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l-----------------------------~-a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRL-----------------------------G-AELIILGGGGHFNAA 156 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHH-----------------------------T--EEEEETS-TTSSGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHc-----------------------------C-CCeEECCCCCCcccc
Confidence 44488999999999999998888854 3 667899999999765
No 177
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=56.37 E-value=6.3 Score=35.24 Aligned_cols=17 Identities=35% Similarity=0.864 Sum_probs=14.1
Q ss_pred CCCCEEEEECCCCCchh
Q 012861 70 ASKPLVLWLNGGPGCSS 86 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss 86 (455)
.+.|-|||+-|||||.-
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 35788999999999864
No 178
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=55.59 E-value=24 Score=32.53 Aligned_cols=57 Identities=18% Similarity=0.310 Sum_probs=40.8
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCc--HH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQP--RR 438 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP--~~ 438 (455)
.++.|-+-|+.|.+++..-.+...+. +.+ - .+...-.||+||.-.| +.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~----------------------------~~~-a-~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES----------------------------FKD-A-TVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh----------------------------cCC-C-eEEecCCCccCCCchHHHHH
Confidence 58899999999999999888877772 223 1 3667789999998664 33
Q ss_pred HHHHHHHHH
Q 012861 439 SLALFNAFL 447 (455)
Q Consensus 439 a~~m~~~fl 447 (455)
+.+.|+.++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 444454444
No 179
>PLN02442 S-formylglutathione hydrolase
Probab=53.99 E-value=41 Score=32.30 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=36.0
Q ss_pred hcCceEEEEecCCccccCch-hHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccc
Q 012861 359 KSGIRVLVYSGDQDSVLPLT-GTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAP 432 (455)
Q Consensus 359 ~~~irVLiy~Gd~D~i~n~~-G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP 432 (455)
..+.+|++.+|+.|.+|+.. .++.+.+.++. .+ .+ .++....|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~-~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE-AG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH-cC-----------------------CC-eEEEEeCCCCccHH
Confidence 34789999999999999974 46666665431 11 14 78889999999765
No 180
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=53.55 E-value=8.4 Score=38.68 Aligned_cols=57 Identities=26% Similarity=0.362 Sum_probs=36.1
Q ss_pred CCCCEEEEECCCCCc--hhhhhhhhccCCCCccC-------CCcccccCCCcccCCceEEEecCCccc
Q 012861 70 ASKPLVLWLNGGPGC--SSIGAGAFCEHGPFKPS-------GDTLLRNEYSWNKEANMLYLESPAGVG 128 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~--ss~~~g~f~E~GP~~~~-------~~~l~~n~~sw~~~an~l~iDqPvG~G 128 (455)
++.|+=|-+.|-+|+ ||++ -.+-+.|+=.-+ ..+..+.+|.--++.||.+.|.| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfI-NalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFI-NALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHH-HHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHH-HHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 356788888887776 7775 888788875433 23566777887899999999999 887
No 181
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=52.55 E-value=22 Score=34.13 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeecccccc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHY 180 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 180 (455)
.++++.+++.+..-....|+=..-++|++|||-|..=
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 4567788888888888888866667999999988553
No 182
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=52.25 E-value=11 Score=35.13 Aligned_cols=45 Identities=18% Similarity=0.067 Sum_probs=35.6
Q ss_pred HCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 160 KFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 160 ~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
+|+-...+ ..|+|.|+||.-+-.+|.+-.+ -+.+++..+|.+++.
T Consensus 109 ~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd-----~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 109 NYRTDPDR-RAIAGHSMGGYGALYLALRHPD-----LFGAVIAFSGALDPS 153 (251)
T ss_dssp HSSEEECC-EEEEEETHHHHHHHHHHHHSTT-----TESEEEEESEESETT
T ss_pred hcccccce-eEEeccCCCcHHHHHHHHhCcc-----ccccccccCcccccc
Confidence 35443333 8999999999999888877666 488999999998875
No 183
>PRK07868 acyl-CoA synthetase; Validated
Probab=50.93 E-value=34 Score=39.39 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=59.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcc-c-CCceEEEecCCccccCCccCCCCccccChHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-K-EANMLYLESPAGVGFSYSANKSFYGSVNDAIAA 147 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~-~-~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a 147 (455)
...|.||.++|-+..+.++ -+.-++ ++ -.|. + ...++-+| -|.|...+. .+. .+-.+.+
T Consensus 65 ~~~~plllvhg~~~~~~~~-d~~~~~--------s~----v~~L~~~g~~v~~~d----~G~~~~~~~-~~~-~~l~~~i 125 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMW-DVTRDD--------GA----VGILHRAGLDPWVID----FGSPDKVEG-GME-RNLADHV 125 (994)
T ss_pred CCCCcEEEECCCCCCccce-ecCCcc--------cH----HHHHHHCCCEEEEEc----CCCCChhHc-Ccc-CCHHHHH
Confidence 4668999999987776665 111000 00 0111 2 24677788 254432211 110 0222222
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
..+.++|..-- +....+++|.|.|.||..+-.+|..-.. -.++++++.+.-+|.
T Consensus 126 ~~l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa~~~~----~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 126 VALSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAAYRRS----KDIASIVTFGSPVDT 179 (994)
T ss_pred HHHHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHHhcCC----CccceEEEEeccccc
Confidence 23344443211 1223589999999999998777653211 147888877766654
No 184
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=50.83 E-value=20 Score=36.83 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHH
Q 012861 147 ARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (455)
Q Consensus 147 a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 190 (455)
.++.+.-|++.++. +....++++.|++||+||.|+-+|-....+
T Consensus 161 rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 44555556655554 322334899999999999999998876555
No 185
>KOG3101 consensus Esterase D [General function prediction only]
Probab=49.66 E-value=66 Score=29.64 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=27.1
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccc
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~ 211 (455)
..+.-|+|+|+|||=+-.++.+=.. ..|++.--.|..+|..
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn~~-----kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKNPS-----KYKSVSAFAPICNPIN 180 (283)
T ss_pred chhcceeccccCCCceEEEEEcCcc-----cccceeccccccCccc
Confidence 3458899999999966554433222 3567776777777743
No 186
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=49.56 E-value=47 Score=31.29 Aligned_cols=57 Identities=21% Similarity=0.396 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 146 AARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.+++...++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.||.+.+++
T Consensus 177 ~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~---~vDG~LVG~Asl~~ 234 (242)
T cd00311 177 QAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP---DIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC---CCCEEEeehHhhCH
Confidence 356788899988864 433 22233232 99999999999888864 59999999999876
No 187
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=49.14 E-value=28 Score=30.77 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=27.8
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCC
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~d 208 (455)
..+.+|.|||.|+.-+-..+. .....+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~----~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA----EQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH----HTCCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh----hcccccccEEEEEcCCCc
Confidence 568999999999887666554 222358999999999943
No 188
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=48.75 E-value=12 Score=37.83 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=24.1
Q ss_pred cEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccc
Q 012861 168 EFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (455)
Q Consensus 168 ~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~ 211 (455)
.+-++||||||--+-..+..- ..++..++.|||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH-------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc------cCcceEEEeCCcccCCC
Confidence 589999999998766544333 24889999999998854
No 189
>PRK07868 acyl-CoA synthetase; Validated
Probab=48.68 E-value=23 Score=40.78 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=45.6
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEE-EEEcCCcccccc---CC
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSF-ATIRGASHEAPL---SQ 435 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf-~~V~~AGHmvP~---dq 435 (455)
-..++|++.|..|.++|....+.+.+.+ ++ ..+ ..+.++|||.+. .-
T Consensus 296 i~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a 346 (994)
T PRK07868 296 ITCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRA 346 (994)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhh
Confidence 3589999999999999998888776622 12 333 456789999554 56
Q ss_pred cHHHHHHHHHHHcC
Q 012861 436 PRRSLALFNAFLGG 449 (455)
Q Consensus 436 P~~a~~m~~~fl~~ 449 (455)
|+.....+.+||..
T Consensus 347 ~~~~wp~i~~wl~~ 360 (994)
T PRK07868 347 AQQTWPTVADWVKW 360 (994)
T ss_pred hhhhChHHHHHHHH
Confidence 77777888888863
No 190
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=48.33 E-value=33 Score=30.65 Aligned_cols=114 Identities=20% Similarity=0.132 Sum_probs=58.2
Q ss_pred eccCCCCCCCEEEEECCCCCchhhhhhhhccCC---CCccCCC--cccccCCCcccCCceEEEecCCccccCCccCCCCc
Q 012861 64 EAATEAASKPLVLWLNGGPGCSSIGAGAFCEHG---PFKPSGD--TLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFY 138 (455)
Q Consensus 64 es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~E~G---P~~~~~~--~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~ 138 (455)
++-.|+++.--|.++- ||..+-. .-+.+.. +-.+... ......-.=.+.|-|.|++-...-+....--...
T Consensus 10 va~GD~d~A~~Vav~V--PG~~t~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~- 85 (177)
T PF06259_consen 10 VAVGDPDTADHVAVLV--PGTGTTL-DSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPG- 85 (177)
T ss_pred EEECCcCCcCeeEEEc--CCCCCCc-ccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCch-
Confidence 4556788887788887 6666653 3332110 0000000 0000111112778888886444411111101111
Q ss_pred cccChHHHHHHHHHHHHHHHHHC-CCCCCCcEEEEeeccccccHHHHHHH
Q 012861 139 GSVNDAIAARDNLAFLEGWYEKF-PEYKNREFFITGESYAGHYVPQLAQL 187 (455)
Q Consensus 139 ~~~~d~~~a~~~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~lA~~ 187 (455)
--+..|.++..|++.+-..+ | ...+-++|||||..-+-..+..
T Consensus 86 ---~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 86 ---YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred ---HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 12345667777777765555 3 4579999999998866554443
No 191
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=47.89 E-value=23 Score=35.95 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHh---cccCCceeeEecCCCCCc
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQS---NMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~---n~~inLkGi~IGng~~dp 209 (455)
++++.|.|||+||.++-++-....+. .+.|. +=|.|+.|+...
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIK-RFISIGTPFGGS 163 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhh-EEEEeCCCCCCC
Confidence 78999999999999998887777443 11133 455667666643
No 192
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=47.58 E-value=1.3e+02 Score=31.75 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=25.2
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHH
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 185 (455)
+.++++....|- -..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 567777777674 2356899999999999885543
No 193
>PLN02429 triosephosphate isomerase
Probab=47.34 E-value=48 Score=32.49 Aligned_cols=58 Identities=19% Similarity=0.315 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 146 AARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.++.+..++++++.. +.+-....+-|. |||---|.=+..|..+. +++|+.||.+.+++
T Consensus 240 ~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~---diDG~LVGgASL~~ 298 (315)
T PLN02429 240 QAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE---DIDGFLVGGASLKG 298 (315)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC---CCCEEEeecceecH
Confidence 456778899988864 322111222222 99999999998888754 69999999999876
No 194
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=46.69 E-value=29 Score=30.42 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=28.5
Q ss_pred CCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEe
Q 012861 163 EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAI 202 (455)
Q Consensus 163 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~I 202 (455)
.+..-|+.|-|.||||+....+|..+.. .+.|+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A-----~i~~L~c 119 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA-----PIDGLVC 119 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC-----CcceEEE
Confidence 5556799999999999999999998877 3666654
No 195
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=46.09 E-value=11 Score=34.52 Aligned_cols=49 Identities=18% Similarity=0.242 Sum_probs=30.3
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRR 438 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~ 438 (455)
.+++|-..|..|.+++...++...+... +. .-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~----------------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD----------------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH----------------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc----------------------------CC-cEEEEECCCCcCcCChhhc
Confidence 6999999999999999888877776332 11 3356778999999987653
No 196
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.29 E-value=41 Score=33.44 Aligned_cols=45 Identities=7% Similarity=0.228 Sum_probs=33.4
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhccc---CCceeeEecCCCCCcc
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMK---LNLKGIAIGNPLLEFN 210 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~---inLkGi~IGng~~dp~ 210 (455)
-+.+||..||+|.-.+-....+|.-++.. ..++=+++-.|=+|-.
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 46899999999988777777777666544 4577777777766653
No 197
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=44.74 E-value=84 Score=28.50 Aligned_cols=64 Identities=25% Similarity=0.359 Sum_probs=37.6
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCcccc-----cc
Q 012861 359 KSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEA-----PL 433 (455)
Q Consensus 359 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmv-----P~ 433 (455)
+...+|++..|..|..++....+...+.|+.. + .. .++.+..|++|=- +.
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-----------------------~~-~~~~~y~ga~HgF~~~~~~~ 197 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAA-G-----------------------VD-VEVHVYPGAGHGFANPSRPP 197 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCT-T-----------------------TT-EEEEEETT--TTTTSTTSTT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhc-C-----------------------Cc-EEEEECCCCcccccCCCCcc
Confidence 34689999999999999998888887766310 1 13 7778888899952 23
Q ss_pred CCcHHHHHHHHHHH
Q 012861 434 SQPRRSLALFNAFL 447 (455)
Q Consensus 434 dqP~~a~~m~~~fl 447 (455)
++++++.+..++.+
T Consensus 198 ~~~~aa~~a~~~~~ 211 (218)
T PF01738_consen 198 YDPAAAEDAWQRTL 211 (218)
T ss_dssp --HHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 45666665555543
No 198
>PLN02561 triosephosphate isomerase
Probab=44.48 E-value=52 Score=31.20 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 146 AARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.++++..++++++.+ |..-....+-|. |||---|.=+..|.... ++.|+.||.+.+|+
T Consensus 181 ~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~---~iDG~LVG~ASL~~ 239 (253)
T PLN02561 181 QAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQP---DVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCC---CCCeEEEehHhhHH
Confidence 456778888888754 432212222222 99999999998887754 69999999999987
No 199
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=43.65 E-value=33 Score=31.34 Aligned_cols=124 Identities=16% Similarity=0.188 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCccc-CCceEEEecCCcc----ccCCc---------cCCC
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGV----GFSYS---------ANKS 136 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~-~an~l~iDqPvG~----GfSy~---------~~~~ 136 (455)
++|=||-|+|. |.|+.++- ...++++ ....+ .+..+|+|-|.-+ |.... ....
T Consensus 3 ~k~riLcLHG~-~~na~if~--~q~~~l~----------~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEIFR--QQTSALR----------KALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGP 69 (212)
T ss_dssp ---EEEEE--T-T--HHHHH--HHTHHHH----------HHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT-
T ss_pred CCceEEEeCCC-CcCHHHHH--HHHHHHH----------HHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCc
Confidence 46889999988 66655410 0011111 12233 6788898887655 33311 1111
Q ss_pred CccccC------hHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcc---cCCceeeEecCCCC
Q 012861 137 FYGSVN------DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM---KLNLKGIAIGNPLL 207 (455)
Q Consensus 137 ~~~~~~------d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~---~inLkGi~IGng~~ 207 (455)
.|.... .....++-++.|.++++...-+ -=|.|-|=|+..+..++....+... ...+|-+++.+|+.
T Consensus 70 ~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 70 FYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp -EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 111111 1122334455666666553211 3499999999999888877766542 36789888888887
Q ss_pred Cccc
Q 012861 208 EFNT 211 (455)
Q Consensus 208 dp~~ 211 (455)
-+..
T Consensus 146 p~~~ 149 (212)
T PF03959_consen 146 PPDP 149 (212)
T ss_dssp -EEE
T ss_pred CCch
Confidence 5543
No 200
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=43.22 E-value=29 Score=29.47 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=36.6
Q ss_pred eEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeec
Q 012861 118 MLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGES 175 (455)
Q Consensus 118 ~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GES 175 (455)
||=|| |.||+.-+..-.+..-+|+...+.+.+.-+..++.++ ...+..|+|
T Consensus 23 vvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~----~~~~aY~~S 73 (135)
T PF04446_consen 23 VVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFP----DIVLAYGQS 73 (135)
T ss_dssp EEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSS----SEEEEEEET
T ss_pred EEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCC----CcEEEEEcC
Confidence 78899 9999985554334443788888888888888888886 377888888
No 201
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=42.30 E-value=16 Score=23.34 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.4
Q ss_pred CCEEEEECCCCC
Q 012861 72 KPLVLWLNGGPG 83 (455)
Q Consensus 72 ~Pl~~wlnGGPG 83 (455)
.--.||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999998
No 202
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=42.08 E-value=28 Score=22.14 Aligned_cols=20 Identities=15% Similarity=0.188 Sum_probs=11.1
Q ss_pred hHHHHHHHHHHHHHHhhccC
Q 012861 5 QWIIIVSALFCTTILTAKSV 24 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (455)
||+.+++++.++.++.+.++
T Consensus 2 k~l~~a~~l~lLal~~a~~~ 21 (36)
T PF08194_consen 2 KCLSLAFALLLLALAAAVPA 21 (36)
T ss_pred ceeHHHHHHHHHHHHhcccC
Confidence 56776666655554444433
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=41.58 E-value=62 Score=28.80 Aligned_cols=81 Identities=19% Similarity=0.270 Sum_probs=49.0
Q ss_pred ceEEEecCCcccc-CCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHH--HHHhcc
Q 012861 117 NMLYLESPAGVGF-SYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL--IIQSNM 193 (455)
Q Consensus 117 n~l~iDqPvG~Gf-Sy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~--i~~~n~ 193 (455)
++--|+-|+..+. +|. . +....+.++...|+.+.++-| +.++.|+|-|=|+.-+-..+.. +... .
T Consensus 41 ~~~~V~YpA~~~~~~y~-------~-S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~-~ 108 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYG-------D-SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD-V 108 (179)
T ss_dssp EEEE--S---SCGGSCH-------H-HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH-H
T ss_pred EEEecCCCCCCCccccc-------c-cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh-h
Confidence 3444667766665 332 1 445556688889999999999 5689999999998877666655 1000 0
Q ss_pred cCCcee-eEecCCCCCc
Q 012861 194 KLNLKG-IAIGNPLLEF 209 (455)
Q Consensus 194 ~inLkG-i~IGng~~dp 209 (455)
.=++.+ +.+|||.-.+
T Consensus 109 ~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 109 ADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHEEEEEEES-TTTBT
T ss_pred hhhEEEEEEecCCcccC
Confidence 024666 5788887644
No 204
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=40.66 E-value=52 Score=30.80 Aligned_cols=61 Identities=23% Similarity=0.367 Sum_probs=44.5
Q ss_pred ceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcH---H
Q 012861 362 IRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPR---R 438 (455)
Q Consensus 362 irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~---~ 438 (455)
.++|+.+|..|.+++....+....... . .. .....+.+++|....+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-------------------------~-~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-------------------------E-RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-------------------------c-CC-ceEEEecCCccccccCccHHHHH
Confidence 899999999999999888777766221 0 02 5567888999999986666 4
Q ss_pred HHHHHHHHHcC
Q 012861 439 SLALFNAFLGG 449 (455)
Q Consensus 439 a~~m~~~fl~~ 449 (455)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66666666643
No 205
>PRK10299 PhoPQ regulatory protein; Provisional
Probab=40.45 E-value=22 Score=23.86 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=14.6
Q ss_pred CcchhHHHHH-HHHHHHH--HHhhccCCCCC
Q 012861 1 MGLKQWIIIV-SALFCTT--ILTAKSVPQAD 28 (455)
Q Consensus 1 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 28 (455)
|++++|+.++ .++.|+. +.+.-+-|+.+
T Consensus 1 ~kk~rwiili~iv~~Cl~lyl~ald~~CDQg 31 (47)
T PRK10299 1 MKKFRWVVLVVVVLACLLLWAQVFNMMCDQD 31 (47)
T ss_pred CceeeehHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7889998852 2233333 33334445443
No 206
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=40.37 E-value=71 Score=31.61 Aligned_cols=103 Identities=23% Similarity=0.344 Sum_probs=61.3
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHHH
Q 012861 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDN 150 (455)
Q Consensus 71 ~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~ 150 (455)
-..|||-.-|--| |.|+|=.. .+-.+.+.--.||. | |-+-|.+. .|+. ++..+++.+
T Consensus 242 gq~LvIC~EGNAG--------FYEvG~m~-tP~~lgYsvLGwNh---------P-GFagSTG~---P~p~-n~~nA~DaV 298 (517)
T KOG1553|consen 242 GQDLVICFEGNAG--------FYEVGVMN-TPAQLGYSVLGWNH---------P-GFAGSTGL---PYPV-NTLNAADAV 298 (517)
T ss_pred CceEEEEecCCcc--------ceEeeeec-ChHHhCceeeccCC---------C-CccccCCC---CCcc-cchHHHHHH
Confidence 3567777666533 55666322 01133344455663 6 44444433 2433 666666555
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
++|-.+ +. .|+..++.|.|-|-||.-+...|.--.+ +|++++-.-+
T Consensus 299 vQfAI~---~L-gf~~edIilygWSIGGF~~~waAs~YPd------VkavvLDAtF 344 (517)
T KOG1553|consen 299 VQFAIQ---VL-GFRQEDIILYGWSIGGFPVAWAASNYPD------VKAVVLDATF 344 (517)
T ss_pred HHHHHH---Hc-CCCccceEEEEeecCCchHHHHhhcCCC------ceEEEeecch
Confidence 554432 21 4567899999999999998888875544 8898775544
No 207
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=39.76 E-value=36 Score=30.24 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=30.2
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCC
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~ 206 (455)
.+|.||.+||.|+.-+...+.++.. .+.|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~-----~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR-----QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh-----ccceEEEecCC
Confidence 5789999999998877777777766 59999998875
No 208
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=39.75 E-value=85 Score=29.73 Aligned_cols=58 Identities=21% Similarity=0.371 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 146 AARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.++++..++++++.. +.+- ...+-|. |||---|.=+..+.... ++.|+.||.+.+++.
T Consensus 181 ~~~~v~~~Ir~~l~~~~~~~-~~~~~Il---YGGSV~~~N~~~l~~~~---~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 181 QAQEVHAFIRAVLAELYGEV-AEKVRIL---YGGSVKPDNAAELMAQP---DIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHhcccc-cCCceEE---EcCCCCHHHHHHHhcCC---CCCEEEEeeeeechH
Confidence 466788899988863 4311 2222222 99999999998887754 699999999998763
No 209
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=39.42 E-value=65 Score=31.38 Aligned_cols=68 Identities=10% Similarity=0.064 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHCCC-CCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcccc
Q 012861 145 IAARDNLAFLEGWYEKFPE-YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTD 212 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~~ 212 (455)
.-++|+-++++-+-..... ....++.|+|||=|..=|-.....-......-.++|+++-.|+-|....
T Consensus 85 ~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 85 RDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp HHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred hHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 3355655555444344222 3457899999999977554444332221113679999999998887543
No 210
>PRK14565 triosephosphate isomerase; Provisional
Probab=37.93 E-value=69 Score=30.04 Aligned_cols=53 Identities=17% Similarity=0.342 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.+.+++...+++++. + +-+ .| |||---|.-+..+.++. ++.|+.||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~---~---~~~-Il----YGGSV~~~N~~~l~~~~---~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD---S---KSH-II----YGGSVNQENIRDLKSIN---QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC---C---Cce-EE----EcCccCHhhHHHHhcCC---CCCEEEEechhhcHH
Confidence 344667788888752 1 112 23 99999999999988853 599999999998874
No 211
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=37.59 E-value=26 Score=23.43 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=23.7
Q ss_pred CCCCCccccchhhhHHhhhccCCChHHHHHHHH
Q 012861 204 NPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTR 236 (455)
Q Consensus 204 ng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~ 236 (455)
.|.+||..-..-..+-|+..|+||+++...+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477788765544567789999999998877643
No 212
>PTZ00333 triosephosphate isomerase; Provisional
Probab=37.35 E-value=76 Score=30.14 Aligned_cols=59 Identities=19% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 145 IAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 145 ~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
+.+++++.++++++.. +..-....+-|. |||---|.=+..|.... ++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~---~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP---DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC---CCCEEEEehHhhhh
Confidence 3466888899988763 422212222222 99999999998887754 69999999988874
No 213
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.82 E-value=2.1e+02 Score=29.28 Aligned_cols=88 Identities=23% Similarity=0.265 Sum_probs=56.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCCccCCCcccccCCCcccCCceEEEecCCccccCCccCCCCccccChHHHHHH
Q 012861 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (455)
Q Consensus 70 ~~~Pl~~wlnGGPG~ss~~~g~f~E~GP~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~ 149 (455)
.++|+|+...|= |.|. .|.+ .+-+=.=.+|.|.|+.- =-|=|.... .+....+-.++|.|
T Consensus 61 ~drPtV~~T~GY-~~~~---------~p~r--------~Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~QAA~D 120 (448)
T PF05576_consen 61 FDRPTVLYTEGY-NVST---------SPRR--------SEPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQAASD 120 (448)
T ss_pred CCCCeEEEecCc-cccc---------Cccc--------cchhHhhccceEEEEEe-eccCCCCCC-CCcccccHhHhhHH
Confidence 568999998864 3221 2322 22233346889999875 223344322 23323357788999
Q ss_pred HHHHHHHHHHHCCCCCCCcEEEEeeccccccH
Q 012861 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYV 181 (455)
Q Consensus 150 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 181 (455)
.+...+.|-..+|. ++.=+|-|=||+-.
T Consensus 121 ~Hri~~A~K~iY~~----kWISTG~SKGGmTa 148 (448)
T PF05576_consen 121 QHRIVQAFKPIYPG----KWISTGGSKGGMTA 148 (448)
T ss_pred HHHHHHHHHhhccC----CceecCcCCCceeE
Confidence 99999988777763 68899999999854
No 214
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=33.70 E-value=30 Score=36.84 Aligned_cols=23 Identities=9% Similarity=0.229 Sum_probs=19.8
Q ss_pred CCcEEEEeeccccccHHHHHHHH
Q 012861 166 NREFFITGESYAGHYVPQLAQLI 188 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i 188 (455)
++++.|+|||+||.++-+|-...
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhc
Confidence 57999999999999988877653
No 215
>COG4425 Predicted membrane protein [Function unknown]
Probab=33.29 E-value=59 Score=33.28 Aligned_cols=36 Identities=25% Similarity=0.474 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccc
Q 012861 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGH 179 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 179 (455)
.++|+.+.++.-......|+-+.-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 467888888888888888987777899999998854
No 216
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=32.32 E-value=57 Score=24.88 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=8.8
Q ss_pred chhHHHHHHHHHHHHHH
Q 012861 3 LKQWIIIVSALFCTTIL 19 (455)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (455)
|++.+||+++|-+.+.+
T Consensus 1 MaRRlwiLslLAVtLtV 17 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTV 17 (100)
T ss_pred CchhhHHHHHHHHHHHH
Confidence 34566666666443333
No 217
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=31.59 E-value=97 Score=28.81 Aligned_cols=76 Identities=11% Similarity=0.212 Sum_probs=45.7
Q ss_pred HHhcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEc-CCccccccCC
Q 012861 357 LAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIR-GASHEAPLSQ 435 (455)
Q Consensus 357 LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~-~AGHmvP~dq 435 (455)
.-+-..+||+..|+.|-+||.....+|-+.++.. ..++-+++.|+. .+.-.+. .+=-.-|.|+
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~---------------~~~~~~v~~f~g-~~HGf~~~r~~~~~Ped~ 223 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKEN---------------PAVGSQVKTFSG-VGHGFVARRANISSPEDK 223 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcC---------------cccceeEEEcCC-ccchhhhhccCCCChhHH
Confidence 3344689999999999999999999998866421 112234445543 2222221 1222246666
Q ss_pred c--HHHHHHHHHHHc
Q 012861 436 P--RRSLALFNAFLG 448 (455)
Q Consensus 436 P--~~a~~m~~~fl~ 448 (455)
+ ++|++.+..|++
T Consensus 224 ~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 224 KAAEEAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHHHHHH
Confidence 5 456777777764
No 218
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=31.12 E-value=41 Score=31.10 Aligned_cols=137 Identities=16% Similarity=0.066 Sum_probs=0.0
Q ss_pred ceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCC
Q 012861 117 NMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLN 196 (455)
Q Consensus 117 n~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~in 196 (455)
..+-+|=. |-|=| ..+.|.. +-...|+|+...+|-|-. ....==.|.|+|=||--+--.|.++.+-..-||
T Consensus 64 s~fRfDF~-GnGeS---~gsf~~G-n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viN 134 (269)
T KOG4667|consen 64 SAFRFDFS-GNGES---EGSFYYG-NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDIRNVIN 134 (269)
T ss_pred eEEEEEec-CCCCc---CCccccC-cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCchheEE
Q ss_pred ceeeEecCCCCCccccchhhhHHhhhccCCChHHHHHHHHhhchhHHHHHhhcCCCchhHHHHHHHH
Q 012861 197 LKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQV 263 (455)
Q Consensus 197 LkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~~C~~~~~~~ 263 (455)
+.|=..+-+.++-..+ +.|.++.-+.|.|+....+---..--....+-..+++...++|.++-++|
T Consensus 135 csGRydl~~~I~eRlg-~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C 200 (269)
T KOG4667|consen 135 CSGRYDLKNGINERLG-EDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQC 200 (269)
T ss_pred cccccchhcchhhhhc-ccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccC
No 219
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=30.67 E-value=73 Score=28.83 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=26.9
Q ss_pred ceEEEEecCCccccCchhHHHHHHHHHHHcCC
Q 012861 362 IRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGL 393 (455)
Q Consensus 362 irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~ 393 (455)
-+++|.+|..|.++|....+...+.|+...+.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~~ 200 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKVYGE 200 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHhcCC
Confidence 45789999999999999999999988754444
No 220
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=30.23 E-value=2e+02 Score=29.98 Aligned_cols=114 Identities=19% Similarity=0.361 Sum_probs=70.9
Q ss_pred eEEEEEEeccCCCCCCCEEEEECCCCCchhhhhhhhc--cCC-CCccCCCcccccCCCcccCCceEEEecCCccccCCcc
Q 012861 57 ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFC--EHG-PFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSA 133 (455)
Q Consensus 57 ~lfy~~~es~~~~~~~Pl~~wlnGGPG~ss~~~g~f~--E~G-P~~~~~~~l~~n~~sw~~~an~l~iDqPvG~GfSy~~ 133 (455)
.++|+|-+- .-+-||.|++.|==..-+.. |.++ ..| || |||=|+-+--|==
T Consensus 277 Ei~yYFnPG---D~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~Pf-------------------LL~~DpRleGGaF--- 330 (511)
T TIGR03712 277 EFIYYFNPG---DFKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPF-------------------LLIGDPRLEGGAF--- 330 (511)
T ss_pred eeEEecCCc---CCCCCeEEeeccCcccCcch-hHHHHHhcCCCe-------------------EEeecccccccee---
Confidence 466665332 23459999999977666665 4442 222 43 5677755544422
Q ss_pred CCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 134 ~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
|.. ++ +.-+.+.+.++.-++.. .|+.+++.|.|=|+|..=+-+.+.+ ++=.+|+||=|+++-.
T Consensus 331 ----YlG-s~-eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga~-------l~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 331 ----YLG-SD-EYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGAK-------LSPHAIIVGKPLVNLG 393 (511)
T ss_pred ----eeC-cH-HHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhccc-------CCCceEEEcCcccchh
Confidence 221 22 12234556666655544 5678899999999997755555544 3567999999998753
No 221
>COG3150 Predicted esterase [General function prediction only]
Probab=30.10 E-value=67 Score=28.46 Aligned_cols=58 Identities=19% Similarity=0.246 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCccccch
Q 012861 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFN 214 (455)
Q Consensus 142 ~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~~~~~ 214 (455)
.-.++++.+.+.++ ++.++..-|+|-|-||.|+--|+... -|+. +|.||-+-|...+.
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~-------Gira-v~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC-------GIRA-VVFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh-------CChh-hhcCCCcCchhhhh
Confidence 34455556665665 55566789999999999987777533 2333 46788887765543
No 222
>PRK06762 hypothetical protein; Provisional
Probab=29.56 E-value=31 Score=29.89 Aligned_cols=16 Identities=13% Similarity=0.368 Sum_probs=13.4
Q ss_pred CEEEEECCCCCchhhh
Q 012861 73 PLVLWLNGGPGCSSIG 88 (455)
Q Consensus 73 Pl~~wlnGGPG~ss~~ 88 (455)
|.++|+.|.|||.=..
T Consensus 2 ~~li~i~G~~GsGKST 17 (166)
T PRK06762 2 TTLIIIRGNSGSGKTT 17 (166)
T ss_pred CeEEEEECCCCCCHHH
Confidence 7899999999987553
No 223
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=29.25 E-value=1.1e+02 Score=33.36 Aligned_cols=60 Identities=17% Similarity=0.265 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHH-CCCC-CCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 144 AIAARDNLAFLEGWYEK-FPEY-KNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 144 ~~~a~~~~~fL~~f~~~-fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.+.|++.+.++++++.. +-+- ..+--.| |||---|.=+..|..+. ++.|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl----YGGSV~~~N~~~l~~~~---diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL----YGGSVKSENAAGLFNQP---DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE----ecCCCCHhHHHHHhcCC---CCCeEEeehHhcCHH
Confidence 34577889999998863 3221 1111233 99999999999998875 699999999888873
No 224
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=28.94 E-value=1.1e+02 Score=19.80 Aligned_cols=27 Identities=11% Similarity=0.338 Sum_probs=12.0
Q ss_pred eEEEEEEeccCCCCCCCEEEEECCCCC
Q 012861 57 ALFYYFVEAATEAASKPLVLWLNGGPG 83 (455)
Q Consensus 57 ~lfy~~~es~~~~~~~Pl~~wlnGGPG 83 (455)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 456666444433223333344444553
No 225
>PRK01904 hypothetical protein; Provisional
Probab=28.50 E-value=1.8e+02 Score=26.81 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=39.2
Q ss_pred CcchhHHHHHHHHHHHHHHhhc--cCCCCCceecCCCCCCCCceeE--eeEEEeccCCCceEEEEEEec---cCCC---C
Q 012861 1 MGLKQWIIIVSALFCTTILTAK--SVPQADKIISLPGQPQASFQQY--AGYITIDEKQQRALFYYFVEA---ATEA---A 70 (455)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~lp~~~~~~~~~~--sGyl~v~~~~~~~lfy~~~es---~~~~---~ 70 (455)
|++.+.+..++++|+.+.++|. ..++...+..+.|.. +..... +--++++++....+-|-|-.. .++. .
T Consensus 1 MK~~~~~~~~~~l~~s~~a~A~tL~lp~~i~lL~vnG~k-v~~s~~~~~~~l~L~dgg~hQIv~ry~~~~~~~~~~~~~~ 79 (219)
T PRK01904 1 MKLRKAALAVATLLTSTASFAGMVTTSSNIDFLAIDGQK-ASKSLLKEAKSFNINDTQVHQVVVRVSEIVRSGSDRSLFE 79 (219)
T ss_pred CchhHHHHHHHHHHHhHHhhHheeeCCCceEEEEECCEE-CccccccCCcceEeCCCCceEEEEEEeeccccCCCccEEe
Confidence 6776655544445443333332 223333344455652 211111 223777543235676665432 2232 6
Q ss_pred CCCEEEEECCC
Q 012861 71 SKPLVLWLNGG 81 (455)
Q Consensus 71 ~~Pl~~wlnGG 81 (455)
++|+|+=|++.
T Consensus 80 S~p~IvtF~a~ 90 (219)
T PRK01904 80 SDPIIVTFQGT 90 (219)
T ss_pred CCCEEEEEecC
Confidence 78999999963
No 226
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=28.40 E-value=1.6e+02 Score=32.86 Aligned_cols=29 Identities=21% Similarity=0.094 Sum_probs=25.1
Q ss_pred cCceEEEEecCCccccCchhHHHHHHHHH
Q 012861 360 SGIRVLVYSGDQDSVLPLTGTRTLVNGLA 388 (455)
Q Consensus 360 ~~irVLiy~Gd~D~i~n~~G~~~~i~~l~ 388 (455)
-+++||+.+|..|..++..++.++.++|+
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 46999999999999999988888877664
No 227
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=28.11 E-value=64 Score=32.70 Aligned_cols=35 Identities=40% Similarity=0.858 Sum_probs=26.2
Q ss_pred eEeeEEEeccCCCceEEEEEEeccCCCCCCCEE-EEECC
Q 012861 43 QYAGYITIDEKQQRALFYYFVEAATEAASKPLV-LWLNG 80 (455)
Q Consensus 43 ~~sGyl~v~~~~~~~lfy~~~es~~~~~~~Pl~-~wlnG 80 (455)
...|||+.+. .+++.+ ..|+.....+.||| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 5689999963 467777 77776666677876 89995
No 228
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=27.67 E-value=56 Score=29.60 Aligned_cols=58 Identities=24% Similarity=0.186 Sum_probs=38.3
Q ss_pred hcCceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCcHH
Q 012861 359 KSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRR 438 (455)
Q Consensus 359 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP~~ 438 (455)
.--.++++.+|+.|-++...-..+|.+ . -. ++.+++.+|.|+-.-.-...
T Consensus 147 P~P~~~lvi~g~~Ddvv~l~~~l~~~~------~-----------------------~~-~~~i~i~~a~HFF~gKl~~l 196 (210)
T COG2945 147 PCPSPGLVIQGDADDVVDLVAVLKWQE------S-----------------------IK-ITVITIPGADHFFHGKLIEL 196 (210)
T ss_pred CCCCCceeEecChhhhhcHHHHHHhhc------C-----------------------CC-CceEEecCCCceecccHHHH
Confidence 345789999999996665554444433 1 03 78899999999987665544
Q ss_pred HHHHHHHHH
Q 012861 439 SLALFNAFL 447 (455)
Q Consensus 439 a~~m~~~fl 447 (455)
.-. +..|+
T Consensus 197 ~~~-i~~~l 204 (210)
T COG2945 197 RDT-IADFL 204 (210)
T ss_pred HHH-HHHHh
Confidence 433 33444
No 229
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=26.52 E-value=54 Score=34.29 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=32.4
Q ss_pred HHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCC
Q 012861 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (455)
Q Consensus 151 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng 205 (455)
++++|+....|-. -.+.+-|+|||-||.-|-.+... ...+--++..++-+|
T Consensus 193 L~WV~~nI~~FGG-Dp~~VTl~G~SAGa~sv~~~l~s---p~~~~LF~raI~~SG 243 (535)
T PF00135_consen 193 LKWVQDNIAAFGG-DPDNVTLFGQSAGAASVSLLLLS---PSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHGGGGTE-EEEEEEEEEETHHHHHHHHHHHG---GGGTTSBSEEEEES-
T ss_pred HHHHHhhhhhccc-CCcceeeeeecccccccceeeec---ccccccccccccccc
Confidence 6677777766632 23569999999998877554433 222223667777777
No 230
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=26.39 E-value=87 Score=29.02 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=23.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLA 388 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~ 388 (455)
+++++|++|+.|..|+....++.++...
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 5789999999999999988877776443
No 231
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=26.17 E-value=42 Score=25.76 Aligned_cols=12 Identities=33% Similarity=0.827 Sum_probs=8.4
Q ss_pred ceEEEecCCccc
Q 012861 117 NMLYLESPAGVG 128 (455)
Q Consensus 117 n~l~iDqPvG~G 128 (455)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 468899999998
No 232
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=25.49 E-value=34 Score=22.57 Aligned_cols=16 Identities=31% Similarity=0.326 Sum_probs=13.7
Q ss_pred hhhccCcHHHHHHhcc
Q 012861 309 TTKYLNRKDVQKALHA 324 (455)
Q Consensus 309 ~~~yLN~~~Vr~aLhv 324 (455)
+-.-|++||||++|++
T Consensus 16 l~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 16 LLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHcCHHHHHHHHH
Confidence 5567999999999986
No 233
>COG3596 Predicted GTPase [General function prediction only]
Probab=25.39 E-value=90 Score=29.99 Aligned_cols=60 Identities=22% Similarity=0.259 Sum_probs=38.1
Q ss_pred CCCCEEEEECC--CCCchhhhhhhhccCC-CCccCCCcccccCCCcc--cCCceEEEecCCccccC
Q 012861 70 ASKPLVLWLNG--GPGCSSIGAGAFCEHG-PFKPSGDTLLRNEYSWN--KEANMLYLESPAGVGFS 130 (455)
Q Consensus 70 ~~~Pl~~wlnG--GPG~ss~~~g~f~E~G-P~~~~~~~l~~n~~sw~--~~an~l~iDqPvG~GfS 130 (455)
...|+.+.+-| |=|-||++-.+|+.++ |....+.....-.+.|. ..-||...|.| |.|=|
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVGTDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecccCCCchhhHHhhccccceEEecCC-Ccccc
Confidence 45799999988 5566898656774333 33322323333344554 34789999999 88744
No 234
>PRK15492 triosephosphate isomerase; Provisional
Probab=24.55 E-value=2.1e+02 Score=27.32 Aligned_cols=58 Identities=16% Similarity=0.257 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHH-HCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 146 AARDNLAFLEGWYE-KFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 146 ~a~~~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.+++...++++++. .+-+- ...+-|. |||---|.-+..|..+. ++.|+.||..-++|.
T Consensus 190 ~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~---diDG~LvG~aSl~~~ 248 (260)
T PRK15492 190 YADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP---HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC---CCCEEEeehhhcCHH
Confidence 45677889998864 34322 2223332 99999999999998865 699999999888873
No 235
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=24.13 E-value=1.3e+02 Score=29.42 Aligned_cols=30 Identities=17% Similarity=0.178 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCcEEEEeeccccc
Q 012861 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGH 179 (455)
Q Consensus 148 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 179 (455)
+++.++|+++-+.+|++. .++..|.||-|+
T Consensus 10 ~ei~~~l~~la~~~p~~v--~~~~IG~S~eGR 39 (300)
T cd03871 10 ETIEAWTEQVASENPDLI--SRSQIGTTFEGR 39 (300)
T ss_pred HHHHHHHHHHHHHCCCce--EEEEeeeCCCCC
Confidence 367889999999999865 588899999988
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=24.08 E-value=64 Score=27.07 Aligned_cols=20 Identities=35% Similarity=0.388 Sum_probs=16.7
Q ss_pred CCCCCEEEEECCCCCchhhh
Q 012861 69 AASKPLVLWLNGGPGCSSIG 88 (455)
Q Consensus 69 ~~~~Pl~~wlnGGPG~ss~~ 88 (455)
..++|||+=|+|.||+.--+
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcHHH
Confidence 45689999999999987654
No 237
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=23.48 E-value=46 Score=29.03 Aligned_cols=16 Identities=38% Similarity=0.785 Sum_probs=12.6
Q ss_pred CCEEEEECCCCCchhh
Q 012861 72 KPLVLWLNGGPGCSSI 87 (455)
Q Consensus 72 ~Pl~~wlnGGPG~ss~ 87 (455)
+|.+|||.|=||+.-.
T Consensus 1 ~g~vIwltGlsGsGKt 16 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKT 16 (156)
T ss_dssp S-EEEEEESSTTSSHH
T ss_pred CCEEEEEECCCCCCHH
Confidence 4899999999998654
No 238
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=22.03 E-value=1.9e+02 Score=26.51 Aligned_cols=53 Identities=6% Similarity=-0.039 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCc
Q 012861 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (455)
Q Consensus 146 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp 209 (455)
.++++..+++ +-+ +...+--.| |||---|.=+..+..+. ++.|+.+|.+.+++
T Consensus 152 ~~~~v~~~ir-~~~---~~~~~~~Il----YGGSV~~~N~~~l~~~~---~iDG~LvG~Asl~a 204 (205)
T TIGR00419 152 QPEVVHGSVR-AVK---EVNESVRVL----CGAGISTGEDAELAAQL---GAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHH-hhh---hhcCCceEE----EeCCCCHHHHHHHhcCC---CCCEEEEeeeeecC
Confidence 3556777887 221 111111233 99999999888888764 69999999998875
No 239
>COG0218 Predicted GTPase [General function prediction only]
Probab=21.98 E-value=1e+02 Score=28.02 Aligned_cols=46 Identities=28% Similarity=0.406 Sum_probs=27.3
Q ss_pred CCchhhhhhhhcc-CCCCccC---CCcccccCCCcccCCceEEEecCCccccCC
Q 012861 82 PGCSSIGAGAFCE-HGPFKPS---GDTLLRNEYSWNKEANMLYLESPAGVGFSY 131 (455)
Q Consensus 82 PG~ss~~~g~f~E-~GP~~~~---~~~l~~n~~sw~~~an~l~iDqPvG~GfSy 131 (455)
=|=||++ -.+.. -+=-+.. |-+-..|-+.|.+. +.+||.| |-||-.
T Consensus 35 VGKSSlI-N~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP-GYGyAk 84 (200)
T COG0218 35 VGKSSLI-NALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP-GYGYAK 84 (200)
T ss_pred ccHHHHH-HHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC-Cccccc
Confidence 4788886 44422 2212222 22666688877766 8899999 555543
No 240
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=21.91 E-value=91 Score=28.13 Aligned_cols=59 Identities=19% Similarity=0.425 Sum_probs=27.5
Q ss_pred ceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHH-CCCCCC-CcEEE-Eeeccccc
Q 012861 117 NMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEK-FPEYKN-REFFI-TGESYAGH 179 (455)
Q Consensus 117 n~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~-fp~~~~-~~~yi-~GESYgG~ 179 (455)
++++.|+|=++|..+.... .+ .+....++...++..++.. +.-++. .-++| .+.+.-..
T Consensus 2 dliitDPPY~~~~~~~~~~-~~---~~~~~~~~y~~~~~~~~~~~~rvLk~~g~~~i~~~~~~~~~ 63 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF-DY---GDNKNHEEYLEWMEEWLKECYRVLKPGGSIFIFIDDREIAG 63 (231)
T ss_dssp EEEEE---TSSSCS------CS---CHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-CCEECT
T ss_pred CEEEECCCCCCCCCcchhh-hc---cCCCCHHHHHHHHHHHHHHHHhhcCCCeeEEEEecchhhhH
Confidence 6899999999998862221 22 3333345666666666653 222222 22343 35555444
No 241
>PRK10115 protease 2; Provisional
Probab=21.58 E-value=2.5e+02 Score=30.87 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=25.2
Q ss_pred Cce-EEEEecCCccccCchhHHHHHHHHH
Q 012861 361 GIR-VLVYSGDQDSVLPLTGTRTLVNGLA 388 (455)
Q Consensus 361 ~ir-VLiy~Gd~D~i~n~~G~~~~i~~l~ 388 (455)
.++ +||.+|..|..|+....++|..+|.
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 578 6788999999999999999999885
No 242
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=21.32 E-value=7.3e+02 Score=26.98 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=31.1
Q ss_pred CCcEEEEeeccccccHHHHHHHHHHhcccCCceeeEecCCCCCcc
Q 012861 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (455)
Q Consensus 166 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~inLkGi~IGng~~dp~ 210 (455)
.+.+-|.|-|-||..+.+....-.+. ++.+++.-|++|+.
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdL-----F~avia~VpfmDvL 587 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDL-----FGAVIAKVPFMDVL 587 (712)
T ss_pred ccceeEecccCccchhHHHhccCchH-----hhhhhhcCcceehh
Confidence 67899999999999887776544442 57777888888874
No 243
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=20.97 E-value=3.3e+02 Score=27.38 Aligned_cols=93 Identities=15% Similarity=0.214 Sum_probs=60.1
Q ss_pred hhhhccCcHHHHHHhccCccCcccceeecccccccccCCCCChHHHHHHHHhcCceEEEEecCCccccCchhHHHHHHHH
Q 012861 308 ETTKYLNRKDVQKALHAQLIGVTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGL 387 (455)
Q Consensus 308 ~~~~yLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~l 387 (455)
.+..+||.|..++.+.+- +-.....+| .++-+|.+|--|--...-.+..+.++|
T Consensus 235 gi~~~l~tp~f~~L~~iv-----------------------DP~~Y~~rL---~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 235 GITQQLDTPEFDKLMQIV-----------------------DPYSYRDRL---TMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred CchhhcCCHHHHHHHHhc-----------------------CHHHHHHhc---CccEEEEecCCCceeccCchHHHHhhC
Confidence 466778888887776541 112222333 689999999988776666666666644
Q ss_pred HHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCcccccc-CCcHHHHHHHHHHHcCCCCCC
Q 012861 388 AKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPL-SQPRRSLALFNAFLGGKPLPG 454 (455)
Q Consensus 388 ~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~-dqP~~a~~m~~~fl~~~~~~~ 454 (455)
.+ . =.+-.|+|+||..-. +--+.....+.+.+.|+++|.
T Consensus 289 ~G---------------------------~-K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 289 PG---------------------------E-KYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred CC---------------------------C-eeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCCCCe
Confidence 31 1 123578899998644 444455666777778888874
No 244
>COG1647 Esterase/lipase [General function prediction only]
Probab=20.82 E-value=2.2e+02 Score=26.53 Aligned_cols=61 Identities=20% Similarity=0.244 Sum_probs=43.1
Q ss_pred CceEEEEecCCccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcCCccccccCCc-HHH
Q 012861 361 GIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRGASHEAPLSQP-RRS 439 (455)
Q Consensus 361 ~irVLiy~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~AGHmvP~dqP-~~a 439 (455)
-.+++|..|..|-++|..+.+.....+. - . . =......++||.+-.|.- +..
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~----s---~-------------------~-KeL~~~e~SgHVIt~D~Erd~v 233 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVE----S---D-------------------D-KELKWLEGSGHVITLDKERDQV 233 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhcc----C---C-------------------c-ceeEEEccCCceeecchhHHHH
Confidence 4789999999999999999887777431 0 0 0 122667899999999854 445
Q ss_pred HHHHHHHHc
Q 012861 440 LALFNAFLG 448 (455)
Q Consensus 440 ~~m~~~fl~ 448 (455)
.+-+-+||.
T Consensus 234 ~e~V~~FL~ 242 (243)
T COG1647 234 EEDVITFLE 242 (243)
T ss_pred HHHHHHHhh
Confidence 555666764
No 245
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=20.57 E-value=81 Score=24.37 Aligned_cols=27 Identities=22% Similarity=0.443 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHCCCCCCCcEEEEeeccc
Q 012861 149 DNLAFLEGWYEKFPEYKNREFFITGESYA 177 (455)
Q Consensus 149 ~~~~fL~~f~~~fp~~~~~~~yi~GESYg 177 (455)
+++++.+.|+-++ |-.+.+.+.|+||+
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchHH
Confidence 5677777777664 44678999999994
No 246
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=20.54 E-value=1.2e+02 Score=28.78 Aligned_cols=66 Identities=27% Similarity=0.371 Sum_probs=39.9
Q ss_pred hcCceEEEEecC------CccccCchhHHHHHHHHHHHcCCCcccccceeecCCeeeeEEEEeCCeeEEEEEcC--Cccc
Q 012861 359 KSGIRVLVYSGD------QDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVEGRQAAGWTQVYGDILSFATIRG--ASHE 430 (455)
Q Consensus 359 ~~~irVLiy~Gd------~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~G~~k~~gn~Ltf~~V~~--AGHm 430 (455)
..+++||-+.|+ -|.+||....+. ++.| +.- . +++ .+..+|.| |.|-
T Consensus 182 p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~s-l~~L---~~~--~---------------~~~----Y~e~~v~G~~a~HS 236 (255)
T PF06028_consen 182 PKNIQVLNIYGDLEDGSNSDGIVPNASSLS-LRYL---LKN--R---------------AKS----YQEKTVTGKDAQHS 236 (255)
T ss_dssp TTT-EEEEEEEESBTTCSBTSSSBHHHHCT-HHHH---CTT--T---------------SSE----EEEEEEESGGGSCC
T ss_pred CCCeEEEEEecccCCCCCCCeEEeHHHHHH-HHHH---hhc--c---------------cCc----eEEEEEECCCCccc
Confidence 467999999999 688888776632 2211 110 0 012 34455655 6898
Q ss_pred cccCCcHHHHHHHHHHHcCC
Q 012861 431 APLSQPRRSLALFNAFLGGK 450 (455)
Q Consensus 431 vP~dqP~~a~~m~~~fl~~~ 450 (455)
--.+.|+ +.+.|.+||.++
T Consensus 237 ~LheN~~-V~~~I~~FLw~k 255 (255)
T PF06028_consen 237 QLHENPQ-VDKLIIQFLWGK 255 (255)
T ss_dssp GGGCCHH-HHHHHHHHHCT-
T ss_pred cCCCCHH-HHHHHHHHhcCC
Confidence 8778885 557777788653
No 247
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.54 E-value=2.7e+02 Score=27.80 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=30.9
Q ss_pred CCCcEEEEeeccccccHHHHHHHHHHhccc-CCceeeEecCCCC
Q 012861 165 KNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGIAIGNPLL 207 (455)
Q Consensus 165 ~~~~~yi~GESYgG~yvP~lA~~i~~~n~~-inLkGi~IGng~~ 207 (455)
..||+-|.|+|-|++-|=+....|.+++.. +-=.=+++|.|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 578999999999999999888888886332 2113445565553
No 248
>PRK10949 protease 4; Provisional
Probab=20.39 E-value=60 Score=35.13 Aligned_cols=68 Identities=22% Similarity=0.314 Sum_probs=44.2
Q ss_pred CceEEEecCCccccCCccCCCCccccChHHHHHHHHHHHHHHHHHCCCCCCCcEEEEeeccc--cccHHHHHHHHHHhcc
Q 012861 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYA--GHYVPQLAQLIIQSNM 193 (455)
Q Consensus 116 an~l~iDqPvG~GfSy~~~~~~~~~~~d~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg--G~yvP~lA~~i~~~n~ 193 (455)
+=+|-+|.|-|.|.. ..+++.+.|+.|-+ +++|++..|++|+ |+|+...|.+|.-+..
T Consensus 115 givL~i~s~gG~~~a---------------~~~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~P~ 174 (618)
T PRK10949 115 GIVLDLKNFAGADQP---------------SMQYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLSPQ 174 (618)
T ss_pred EEEEEeCCCCCccHH---------------HHHHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEECCC
Confidence 347778877554322 12356677777653 2679999999997 8888888887776543
Q ss_pred c-CCceeeEec
Q 012861 194 K-LNLKGIAIG 203 (455)
Q Consensus 194 ~-inLkGi~IG 203 (455)
. +.+.|+...
T Consensus 175 G~v~~~G~~~~ 185 (618)
T PRK10949 175 GVVDLHGFATN 185 (618)
T ss_pred ceEEEeeeecc
Confidence 2 445555443
No 249
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=20.39 E-value=1.6e+02 Score=22.88 Aligned_cols=18 Identities=11% Similarity=0.361 Sum_probs=12.3
Q ss_pred CCCceeEeeEEEeccCCC
Q 012861 38 QASFQQYAGYITIDEKQQ 55 (455)
Q Consensus 38 ~~~~~~~sGyl~v~~~~~ 55 (455)
++|-..--|||++...++
T Consensus 32 ~iP~EAiiGyLDl~~d~D 49 (86)
T PF05436_consen 32 NIPAEAIIGYLDLGGDND 49 (86)
T ss_pred cCCHHHHhceeccCCCCc
Confidence 555567789999865444
Done!