Query 012863
Match_columns 455
No_of_seqs 276 out of 1413
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 17:41:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b4r_A Putative zinc metallopr 99.9 7.3E-23 2.5E-27 195.5 6.7 125 284-451 38-162 (224)
2 2di4_A Zinc protease, cell div 58.0 6.1 0.00021 37.9 3.2 28 297-324 18-47 (238)
3 2jsd_A Matrix metalloproteinas 54.2 5.6 0.00019 34.8 2.1 22 296-317 109-130 (160)
4 2xs4_A Karilysin protease; hyd 53.4 5.9 0.0002 35.1 2.1 22 296-317 116-137 (167)
5 3cqb_A Probable protease HTPX 51.6 6.4 0.00022 32.7 2.0 12 296-307 84-95 (107)
6 2ovx_A Matrix metalloproteinas 51.5 5.5 0.00019 35.3 1.6 22 296-317 112-133 (159)
7 1hy7_A Stromelysin-1, MMP-3; m 50.5 6.9 0.00024 34.9 2.1 22 296-317 114-135 (173)
8 1cge_A Fibroblast collagenase; 47.0 7.1 0.00024 34.8 1.6 22 296-317 112-133 (168)
9 1hv5_A Stromelysin 3; inhibiti 42.7 9.1 0.00031 33.9 1.6 22 296-317 114-135 (165)
10 1i76_A MMP-8;, neutrophil coll 42.0 11 0.00039 33.3 2.1 21 296-316 113-133 (163)
11 1slm_A Stromelysin-1; hydrolas 38.2 11 0.00039 36.1 1.6 21 296-316 196-216 (255)
12 2y6d_A Matrilysin; hydrolase; 35.5 16 0.00056 32.7 2.1 22 296-317 116-137 (174)
13 1y93_A Macrophage metalloelast 35.1 14 0.00048 32.6 1.6 20 296-315 109-128 (159)
14 3ayu_A 72 kDa type IV collagen 34.8 14 0.00049 32.9 1.6 20 296-315 115-134 (167)
15 1rm8_A MMP-16, matrix metallop 34.2 18 0.00061 32.1 2.1 21 296-316 118-138 (169)
16 1c7k_A NCNP, zinc endoprotease 32.3 20 0.0007 31.6 2.1 12 297-308 79-90 (132)
17 3m92_A Protein YCIN; DUF2498, 31.7 52 0.0018 28.0 4.4 66 151-217 25-103 (107)
18 2w15_A Zinc metalloproteinase 31.2 20 0.00068 32.5 1.9 18 295-312 136-153 (202)
19 3c37_A Peptidase, M48 family; 30.3 22 0.00074 33.6 2.1 12 296-307 101-112 (253)
20 2cki_A Ulilysin; metalloprotea 28.7 17 0.00058 35.2 1.1 13 296-308 163-175 (262)
21 830c_A MMP-13, MMP-13; matrix 28.6 21 0.00072 32.1 1.6 22 296-317 114-135 (168)
22 1atl_A Atrolysin C; metalloend 28.2 24 0.00082 32.0 1.9 19 295-313 136-154 (202)
23 1bud_A Protein (acutolysin A); 27.9 25 0.00084 31.7 1.9 19 295-313 133-151 (197)
24 1qua_A Acutolysin-C, hemorrhag 27.0 26 0.00089 31.6 1.9 17 295-311 135-151 (197)
25 3ma2_D Matrix metalloproteinas 26.9 23 0.00079 32.3 1.6 22 296-317 123-144 (181)
26 1kuf_A Atrolysin E, metallopro 26.7 26 0.0009 31.8 1.9 17 295-311 138-154 (203)
27 1yp1_A FII; FII hydrolase; 1.9 26.5 27 0.00091 31.7 1.9 18 295-312 135-152 (202)
28 2ddf_A ADAM 17; hydrolase; HET 25.8 26 0.00089 32.8 1.8 19 295-313 182-200 (257)
29 3b8z_A Protein adamts-5; alpha 25.3 26 0.00088 32.0 1.6 17 296-312 142-158 (217)
30 1sat_A Serratia protease; para 25.0 29 0.001 36.1 2.1 21 296-316 171-191 (471)
31 1g9k_A Serralysin; beta jelly 24.2 31 0.0011 35.9 2.1 20 296-315 164-183 (463)
32 2v4b_A Adamts-1; zymogen, prot 24.2 27 0.00093 33.5 1.6 19 295-313 143-161 (300)
33 1kap_P Alkaline protease; calc 23.5 32 0.0011 35.9 2.1 19 297-315 181-199 (479)
34 2rjp_A Adamts-4; metalloprotea 22.9 30 0.001 33.6 1.6 18 295-312 143-160 (316)
35 1k7i_A PROC, secreted protease 22.8 34 0.0012 35.7 2.1 21 296-316 183-203 (479)
36 2ero_A VAP-1, vascular apoptos 22.8 34 0.0012 34.9 2.1 21 294-314 145-165 (427)
37 1l6j_A Matrix metalloproteinas 22.6 30 0.001 36.0 1.6 22 296-317 377-398 (425)
38 2rjq_A Adamts-5; metalloprotea 22.4 30 0.001 34.3 1.6 18 295-312 143-160 (378)
39 4dd8_A Disintegrin and metallo 22.4 38 0.0013 30.9 2.1 16 296-311 134-149 (208)
40 2dw0_A Catrocollastatin; apopt 21.4 38 0.0013 34.6 2.1 20 295-314 137-156 (419)
41 1r55_A ADAM 33; metalloproteas 20.7 41 0.0014 30.8 1.9 19 295-313 136-154 (214)
42 2e3x_A Coagulation factor X-ac 20.6 43 0.0015 34.3 2.3 20 295-314 139-158 (427)
43 1z8u_A Alpha-hemoglobin stabil 20.1 6.9 0.00024 33.0 -3.0 59 148-218 24-88 (102)
No 1
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=7.3e-23 Score=195.54 Aligned_cols=125 Identities=29% Similarity=0.420 Sum_probs=98.4
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcccccccceeeeeeEEEEccccccCccceEEEEEchHHHHHHHHHH
Q 012863 284 LTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQIGSFGAITRIRNIVSKREDLLKVAAAGPLAGFSLGFV 363 (455)
Q Consensus 284 l~~glp~aL~ll~iL~iHElGH~laAr~~Gvkvs~PyFIP~i~LgtFGavi~~~s~~p~RkalfdIAlAGPlAgfllAli 363 (455)
+..| .+++++++++.+||+||+++||++|++++. +.+.+||+++++++. +++++++|++|||++|++++++
T Consensus 38 ~~~g-~~~l~l~~~v~~HElgH~~~A~~~G~~~~~------i~l~p~Gg~~~~~~~--~~~~~~~ValAGPl~nl~la~~ 108 (224)
T 3b4r_A 38 IFWA-VLFILLFVSVVLHELGHSYVAKKYGVKIEK------ILLLPIGGVAMMDKI--PKEGELRIGIAGPLVSFIIGIV 108 (224)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------EEECSSSCBCCCCCC--CSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCcccc------EEEEEeeeEEEcccC--CccceeeeeeeHHHHHHHHHHH
Confidence 3444 677888899999999999999999999984 455568988888653 4588999999999999999988
Q ss_pred HHHHHHhcCCCCCCcccccccchhhhhhhhhhhhhhhccccCCCCCccchHHHHHHHHHHHHHHHhhcCCCCCChHHHHH
Q 012863 364 LFLVGFIFPPSDGIGIVVDASVFHESFLAGGFAKLLLGDVLKDGTPISVNPLVIWAWAGLLINAINSIPAGELDGGRIAF 443 (455)
Q Consensus 364 ~lligl~ls~~~g~~~~v~~~~f~~S~Llg~la~l~LG~~l~~~~~i~lhPLa~agwlgLvltafNLLPigpLDGGrIl~ 443 (455)
++++....+.. . .. ...+.+++|+|+++++|||+|++|||||||++
T Consensus 109 ~~~~~~~~~~~---------------------------~------~~-~~~~~~~~~iNl~l~~fNLlPi~PLDGgril~ 154 (224)
T 3b4r_A 109 LLIVSQFFDIN---------------------------I------NG-YPLLYTLSLLNLMLGGFNLIPAFPMDGGRILR 154 (224)
T ss_dssp HHHHTTTCCCE---------------------------E------TT-EEHHHHHHHHHHHHHHHTTSSSSSSHHHHHHH
T ss_pred HHHHHHHccCc---------------------------c------hH-HHHHHHHHHHHHHHHHHHccCCCCCCHHHHHH
Confidence 76654321100 0 00 12345689999999999999999999999999
Q ss_pred Hhhhhhhh
Q 012863 444 ALWGRKVS 451 (455)
Q Consensus 444 Allgrr~a 451 (455)
++++++..
T Consensus 155 ~ll~~~~~ 162 (224)
T 3b4r_A 155 AILSKKYG 162 (224)
T ss_dssp HHHHHHHC
T ss_pred HHhccccc
Confidence 99887653
No 2
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=58.03 E-value=6.1 Score=37.91 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHcC--CccCccccccc
Q 012863 297 VIGVHELGHILAAKSTG--VELGVPYFVPS 324 (455)
Q Consensus 297 iL~iHElGH~laAr~~G--vkvs~PyFIP~ 324 (455)
++..||.||+++|...+ .++..--++|.
T Consensus 18 ~vAyHEAGHAlva~~l~~~~pV~KVTIiPR 47 (238)
T 2di4_A 18 KIAIHEAGHALMGLVSDDDDKVHKISIIPR 47 (238)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCCCCEECC--
T ss_pred HHHHHHHHHHHHHHHcCCCCceeEEEEeec
Confidence 56789999999999987 45543335564
No 3
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=54.18 E-value=5.6 Score=34.75 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++=-.+-..+-+
T Consensus 109 ~~v~~HEiGHaLGL~H~~~~~s 130 (160)
T 2jsd_A 109 FTVAAHEFGHALGLAHSTDPSA 130 (160)
T ss_dssp HHHHHHHHHHHHTCCCCCCTTC
T ss_pred HHHHHHHhHhhhcCCCCCCCCc
Confidence 4678999999987766555443
No 4
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=53.37 E-value=5.9 Score=35.09 Aligned_cols=22 Identities=27% Similarity=0.650 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++=-.+-..+-+
T Consensus 116 ~~v~~HEiGHaLGL~H~~~~~s 137 (167)
T 2xs4_A 116 ITVAAHEIGHLLGIEHSNVSSA 137 (167)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred hhhHHHHHHHhhcCCCCCCCCc
Confidence 4688999999987765555443
No 5
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.63 E-value=6.4 Score=32.72 Aligned_cols=12 Identities=33% Similarity=0.465 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHH
Q 012863 296 LVIGVHELGHIL 307 (455)
Q Consensus 296 ~iL~iHElGH~l 307 (455)
..+++||+||+.
T Consensus 84 ~aVlaHElgH~~ 95 (107)
T 3cqb_A 84 EAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468899999974
No 6
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=51.52 E-value=5.5 Score=35.26 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++=-.+-..+-+
T Consensus 112 ~~va~HEiGHaLGL~Hs~~~~~ 133 (159)
T 2ovx_A 112 FLVAAHQFGHALGLDHSSVPEA 133 (159)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhhhhhhhhhhcCCCCCCCcc
Confidence 4688999999987665555443
No 7
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=50.45 E-value=6.9 Score=34.94 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++=-.+-..+-+
T Consensus 114 ~~v~~HEiGHaLGL~H~~~~~s 135 (173)
T 1hy7_A 114 FLVAAHEIGHSLGLFHSANTEA 135 (173)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred hhhHHHHHHHhhcCCCCCCCCc
Confidence 4678999999987765555443
No 8
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=47.04 E-value=7.1 Score=34.79 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++=-.+-..+.+
T Consensus 112 ~~v~~HEiGHaLGL~H~~~~~s 133 (168)
T 1cge_A 112 HRVAAHELGHSLGLSHSTDIGA 133 (168)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhhhhHhHhhhcCCCCCCCCc
Confidence 4678999999987655555443
No 9
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=42.67 E-value=9.1 Score=33.90 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++--.+-..+.+
T Consensus 114 ~~v~~HEiGHaLGL~H~~~~~s 135 (165)
T 1hv5_A 114 LQVAAHEFGHVLGLQHTTAAKA 135 (165)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhHHHHhHhhhCCCCCCCCCc
Confidence 4678999999987655555443
No 10
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=42.02 E-value=11 Score=33.33 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 012863 296 LVIGVHELGHILAAKSTGVEL 316 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkv 316 (455)
..+++||+||++--.+...+-
T Consensus 113 ~~v~~HE~GHalGl~H~~~~~ 133 (163)
T 1i76_A 113 FLVAAHEFGHSLGLAHSSDPG 133 (163)
T ss_dssp HHHHHHHHHHHHTBCCCSCTT
T ss_pred hhhhHHHhhhhhcCCCCCCCC
Confidence 467899999998766555543
No 11
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=38.21 E-value=11 Score=36.09 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 012863 296 LVIGVHELGHILAAKSTGVEL 316 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkv 316 (455)
..+++||+||++=-.+-..+-
T Consensus 196 ~~va~HEiGHaLGL~Hs~~~~ 216 (255)
T 1slm_A 196 FLVAAHEIGHSLGLFHSANTE 216 (255)
T ss_dssp HHHHHHHHHHHTTCCCCSCTT
T ss_pred hhhhHHHHHHHhcCCCCCCCC
Confidence 468899999998765555443
No 12
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=35.51 E-value=16 Score=32.74 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++--.+...+-+
T Consensus 116 ~~~~~HE~gH~lGl~h~~~~~s 137 (174)
T 2y6d_A 116 LYAATHELGHSLGMGHSSDPNA 137 (174)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred eehhhHHhHhhhcCCCCCCCCc
Confidence 4678999999987665554443
No 13
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=35.11 E-value=14 Score=32.63 Aligned_cols=20 Identities=30% Similarity=0.514 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHcCCc
Q 012863 296 LVIGVHELGHILAAKSTGVE 315 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvk 315 (455)
..+++||+||.+--.+...+
T Consensus 109 ~~~~~HE~GH~lGl~H~~~~ 128 (159)
T 1y93_A 109 FLTAVHEIGHSLGLGHSSDP 128 (159)
T ss_dssp HHHHHHHHHHHTTCCCCSCT
T ss_pred hhhhhhhhhhhhcCCCCCCC
Confidence 45789999999866544443
No 14
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=34.77 E-value=14 Score=32.90 Aligned_cols=20 Identities=15% Similarity=0.459 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHcCCc
Q 012863 296 LVIGVHELGHILAAKSTGVE 315 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvk 315 (455)
..+++||+||++--.+...+
T Consensus 115 ~~~~~HE~gH~lGl~H~~~~ 134 (167)
T 3ayu_A 115 FLVAAHAFGHAMGLEHSQDP 134 (167)
T ss_dssp HHHHHHHHHHHTTEECCSCT
T ss_pred eeehhhhhHHhccCCCCCCC
Confidence 36789999999876554444
No 15
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=34.20 E-value=18 Score=32.05 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 012863 296 LVIGVHELGHILAAKSTGVEL 316 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkv 316 (455)
..+++||+||++--.+...+-
T Consensus 118 ~~~~~he~gh~lgl~h~~~~~ 138 (169)
T 1rm8_A 118 FLVAVHELGHALGLEHSNDPT 138 (169)
T ss_dssp HHHHHHHHHHHHTCCCCSCTT
T ss_pred eeehhhhhhhhcCCCCCCCCC
Confidence 367899999998776555443
No 16
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=32.27 E-value=20 Score=31.56 Aligned_cols=12 Identities=42% Similarity=0.794 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 012863 297 VIGVHELGHILA 308 (455)
Q Consensus 297 iL~iHElGH~la 308 (455)
.+.+||+||.+-
T Consensus 79 ~v~aHE~GH~LG 90 (132)
T 1c7k_A 79 RVTAHETGHVLG 90 (132)
T ss_dssp HHHHHHHHHHHT
T ss_pred eEEeeeehhccC
Confidence 578999999863
No 17
>3m92_A Protein YCIN; DUF2498, structural genomics, PSI-2, protein structure initi midwest center for structural genomics, MCSG, unknown funct; HET: MSE; 2.05A {Shigella flexneri 2A}
Probab=31.73 E-value=52 Score=28.00 Aligned_cols=66 Identities=17% Similarity=0.341 Sum_probs=44.1
Q ss_pred cccCCCChhHH-----HHhhcccccceeeeeccccccCceEEEEeccC-------C-chHHHHHHHHHHHHhhhCCceEE
Q 012863 151 DEYIRIPKETI-----DILKDQVFGFDTFFVTNQEPYEGGVLFKGNLR-------G-QAAKTYEKISTRMKNKFGDQYKL 217 (455)
Q Consensus 151 ~~~~~i~~edl-----~~ik~~~Fg~dtF~~t~~~~~~~gvi~rGnLR-------~-~~e~~y~~l~~~l~~~fGd~y~l 217 (455)
.+.-+|++++| ++||+.===+.--.+|++|-..+..+|||+.= + +...||. +-+-|.-.+..+|.|
T Consensus 25 ~~~~~I~r~~LL~~AN~iI~eHeDyi~GM~A~~Veqk~~VLVFkGeyFLDe~GLPT~KTTAVFN-MFK~LAh~LS~ky~L 103 (107)
T 3m92_A 25 KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-MFKHLAHVLSEKYHL 103 (107)
T ss_dssp CCCEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCEEEEECCCCCTTSCCCHHHHHHHH-HHHHHHHHHTTTEEE
T ss_pred CCCCccCHHHHHHHHHHHHHHhHHHhccccccceeeeCCEEEEecceeecCCCCCCcccHHHHH-HHHHHHHHhChheec
Confidence 45668999998 45654222233467999999999999999942 2 2244554 344566667778976
No 18
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=31.19 E-value=20 Score=32.49 Aligned_cols=18 Identities=39% Similarity=0.479 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 012863 295 ALVIGVHELGHILAAKST 312 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~ 312 (455)
.+..++||+||-+=+.+-
T Consensus 136 ~a~~~AHElGH~lG~~HD 153 (202)
T 2w15_A 136 VAVTMAHELGHNLGIHHD 153 (202)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhhhcCCccC
Confidence 457889999998766553
No 19
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=30.29 E-value=22 Score=33.61 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHH
Q 012863 296 LVIGVHELGHIL 307 (455)
Q Consensus 296 ~iL~iHElGH~l 307 (455)
..+++||+||..
T Consensus 101 aaVLaHElgH~~ 112 (253)
T 3c37_A 101 AGVLAHEINHAV 112 (253)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468899999984
No 20
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=28.67 E-value=17 Score=35.16 Aligned_cols=13 Identities=38% Similarity=0.524 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHH
Q 012863 296 LVIGVHELGHILA 308 (455)
Q Consensus 296 ~iL~iHElGH~la 308 (455)
...++||+||++=
T Consensus 163 g~TltHEvGH~LG 175 (262)
T 2cki_A 163 GRTATHEIGHWLN 175 (262)
T ss_dssp SHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhc
Confidence 3578999999873
No 21
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=28.57 E-value=21 Score=32.09 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||.+--.+-..+-+
T Consensus 114 ~~v~~hE~Gh~lGl~h~~~~~a 135 (168)
T 830c_A 114 FLVAAHEFGHSLGLDHSKDPGA 135 (168)
T ss_dssp HHHHHHHHHHHTTBCCCSCTTS
T ss_pred hhhhhhhhcchhcCCCCCCCcc
Confidence 4678999999987655555443
No 22
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=28.16 E-value=24 Score=31.99 Aligned_cols=19 Identities=42% Similarity=0.511 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012863 295 ALVIGVHELGHILAAKSTG 313 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~G 313 (455)
.+..++||+||-+=+.+-+
T Consensus 136 ~a~~~AHElGHnlG~~HD~ 154 (202)
T 1atl_A 136 MGVTMAHELGHNLGMEHDG 154 (202)
T ss_dssp HHHHHHHHHHHHTTCCCCC
T ss_pred eEEEehhhhccccCceeCC
Confidence 3568899999987665433
No 23
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=27.88 E-value=25 Score=31.74 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012863 295 ALVIGVHELGHILAAKSTG 313 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~G 313 (455)
.+..++||+||-+=+.+-+
T Consensus 133 ~a~~~AHElGH~lG~~HD~ 151 (197)
T 1bud_A 133 VAITLAHEMAHNLGVSHDE 151 (197)
T ss_dssp HHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhhhcCCccCC
Confidence 3567899999998666533
No 24
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=27.05 E-value=26 Score=31.58 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012863 295 ALVIGVHELGHILAAKS 311 (455)
Q Consensus 295 l~iL~iHElGH~laAr~ 311 (455)
.+..++||+||-+=+.+
T Consensus 135 ~a~~~AHElGH~lG~~H 151 (197)
T 1qua_A 135 MAVTMAHELGHNLGMNH 151 (197)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 45678999999876554
No 25
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=26.95 E-value=23 Score=32.28 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||.+--.+...+-+
T Consensus 123 ~~v~~hE~Gh~lGl~hs~~~~a 144 (181)
T 3ma2_D 123 FLVAVHELGHALGLEHSSDPSA 144 (181)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred eeeehhhccccccCCcCCCCcc
Confidence 3588999999976554444433
No 26
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=26.74 E-value=26 Score=31.81 Aligned_cols=17 Identities=41% Similarity=0.518 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012863 295 ALVIGVHELGHILAAKS 311 (455)
Q Consensus 295 l~iL~iHElGH~laAr~ 311 (455)
.+..++||+||-+=+.+
T Consensus 138 ~a~~~AHElGH~lG~~H 154 (203)
T 1kuf_A 138 VAVTMTHELGHNLGMEH 154 (203)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hHHHHHHHhhhhcCCCC
Confidence 45788999999876554
No 27
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=26.53 E-value=27 Score=31.67 Aligned_cols=18 Identities=39% Similarity=0.484 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 012863 295 ALVIGVHELGHILAAKST 312 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~ 312 (455)
++..++||+||-+=+.+-
T Consensus 135 ~a~~~AHElGH~lG~~HD 152 (202)
T 1yp1_A 135 MAVVMAHELGHNLGMLHD 152 (202)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 356889999999766543
No 28
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=25.76 E-value=26 Score=32.78 Aligned_cols=19 Identities=37% Similarity=0.525 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012863 295 ALVIGVHELGHILAAKSTG 313 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~G 313 (455)
...+++||+||-+=+.+-+
T Consensus 182 ~a~~~AHElGHnlG~~HD~ 200 (257)
T 2ddf_A 182 ADLVTTHELGHNFGAEHDP 200 (257)
T ss_dssp HHHHHHHHHHHHTTCCCCC
T ss_pred eeeeeeeehhhhcCcccCC
Confidence 4578899999987666543
No 29
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=25.28 E-value=26 Score=32.02 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHc
Q 012863 296 LVIGVHELGHILAAKST 312 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~ 312 (455)
+..++||+||-+=+.+-
T Consensus 142 a~~~AHElGHnlG~~HD 158 (217)
T 3b8z_A 142 AFTVAHEIGHLLGLSHD 158 (217)
T ss_dssp HHHHHHHHHHHTTCCCT
T ss_pred hhhhHhhhhhhcCCcCC
Confidence 46889999998765543
No 30
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=25.04 E-value=29 Score=36.07 Aligned_cols=21 Identities=29% Similarity=0.256 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 012863 296 LVIGVHELGHILAAKSTGVEL 316 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkv 316 (455)
..+++||+||++=-.+-+.+-
T Consensus 171 ~~va~HEiGHaLGL~Hs~~~~ 191 (471)
T 1sat_A 171 RQTFTHEIGHALGLSHPGDYN 191 (471)
T ss_dssp HHHHHHHHHHHHTCCCSSCCC
T ss_pred ceeeeeeccccccCCCCCCcc
Confidence 367899999999877766654
No 31
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=24.18 E-value=31 Score=35.87 Aligned_cols=20 Identities=30% Similarity=0.335 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHcCCc
Q 012863 296 LVIGVHELGHILAAKSTGVE 315 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvk 315 (455)
..+++||+||++=-++-+..
T Consensus 164 ~~va~HEiGHaLGL~Hs~~~ 183 (463)
T 1g9k_A 164 RQTLTHEIGHTLGLSHPGDY 183 (463)
T ss_dssp HHHHHHHHHHHHTCCCSSCC
T ss_pred hhhhhhhhhhhhccCCCCcc
Confidence 36789999999987765543
No 32
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=24.16 E-value=27 Score=33.55 Aligned_cols=19 Identities=32% Similarity=0.515 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012863 295 ALVIGVHELGHILAAKSTG 313 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~G 313 (455)
.+.+++||+||-+=+.+-+
T Consensus 143 ~a~t~AHElGHnlG~~HD~ 161 (300)
T 2v4b_A 143 AAFTTAHELGHVFNMPHDD 161 (300)
T ss_dssp HHHHHHHHHHHHTTCCCTT
T ss_pred ceehhhhhhhhhcCCcCCC
Confidence 3578899999987666543
No 33
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=23.49 E-value=32 Score=35.87 Aligned_cols=19 Identities=32% Similarity=0.391 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHcCCc
Q 012863 297 VIGVHELGHILAAKSTGVE 315 (455)
Q Consensus 297 iL~iHElGH~laAr~~Gvk 315 (455)
.+++||+||++=-.+-+.+
T Consensus 181 ~va~HEIGHaLGL~Hs~~~ 199 (479)
T 1kap_P 181 QTLTHEIGHTLGLSHPGDY 199 (479)
T ss_dssp HHHHHHHHHHHTCCCSSSC
T ss_pred eeehhhhhhhhccCCCCCc
Confidence 5779999999987776554
No 34
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=22.92 E-value=30 Score=33.60 Aligned_cols=18 Identities=22% Similarity=0.484 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 012863 295 ALVIGVHELGHILAAKST 312 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~ 312 (455)
.+++++||+||-+=+.+-
T Consensus 143 ~a~t~AHElGHnlGm~HD 160 (316)
T 2rjp_A 143 SAFTAAHQLGHVFNMLHD 160 (316)
T ss_dssp HHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHhhcCccCC
Confidence 457889999998766543
No 35
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=22.84 E-value=34 Score=35.68 Aligned_cols=21 Identities=29% Similarity=0.264 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 012863 296 LVIGVHELGHILAAKSTGVEL 316 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkv 316 (455)
..+++||+||++=-.+-+..-
T Consensus 183 ~~va~HEiGHaLGL~Hs~~~~ 203 (479)
T 1k7i_A 183 RQTFTHEIGHALGLAHPGEYN 203 (479)
T ss_dssp HHHHHHHHHHHHTCCCSSSCC
T ss_pred ccccHHHHHHhhcCCCCCccc
Confidence 467899999999877766654
No 36
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=22.84 E-value=34 Score=34.95 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCC
Q 012863 294 TALVIGVHELGHILAAKSTGV 314 (455)
Q Consensus 294 ll~iL~iHElGH~laAr~~Gv 314 (455)
.++++++||+||-+=+.+-+.
T Consensus 145 ~~a~t~AHElGHnlG~~HD~~ 165 (427)
T 2ero_A 145 LVAIAMAHEMGHNLGMDHDKD 165 (427)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHHhcCCccCCC
Confidence 345789999999887765443
No 37
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=22.61 E-value=30 Score=35.99 Aligned_cols=22 Identities=27% Similarity=0.561 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 012863 296 LVIGVHELGHILAAKSTGVELG 317 (455)
Q Consensus 296 ~iL~iHElGH~laAr~~Gvkvs 317 (455)
..+++||+||++--.+...+-+
T Consensus 377 ~~Va~HE~GHaLGL~Hs~~~~s 398 (425)
T 1l6j_A 377 FLVAAHEFGHALGLDHSSVPEA 398 (425)
T ss_dssp HHHHHHHHHHHTTCCCCCCTTS
T ss_pred hhhhhhhhhhhcccCcCCCCCC
Confidence 4688999999987655554443
No 38
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=22.43 E-value=30 Score=34.34 Aligned_cols=18 Identities=33% Similarity=0.529 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 012863 295 ALVIGVHELGHILAAKST 312 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~ 312 (455)
++++++||+||-+=+.+-
T Consensus 143 ~a~~~AHElGHnlGm~HD 160 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLSHD 160 (378)
T ss_dssp HHHHHHHHHHHHTTCCCT
T ss_pred hhhhhhhhhhhhcCccCC
Confidence 457889999998866543
No 39
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=22.42 E-value=38 Score=30.87 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 012863 296 LVIGVHELGHILAAKS 311 (455)
Q Consensus 296 ~iL~iHElGH~laAr~ 311 (455)
+..++||+||-+=+.+
T Consensus 134 a~~~AHElGH~lG~~H 149 (208)
T 4dd8_A 134 ACTMAHEMGHNLGMDH 149 (208)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCCcC
Confidence 4688999999876544
No 40
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=21.40 E-value=38 Score=34.55 Aligned_cols=20 Identities=35% Similarity=0.443 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 012863 295 ALVIGVHELGHILAAKSTGV 314 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~Gv 314 (455)
++.+++||+||-+=+.+-+.
T Consensus 137 ~a~t~AHElGHnlG~~HD~~ 156 (419)
T 2dw0_A 137 VAVIMAHEMGHNLGINHDSG 156 (419)
T ss_dssp HHHHHHHHHHHHTTCCCCCT
T ss_pred hhhhHHHHHHHHcCCccCCC
Confidence 35788999999887665443
No 41
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=20.66 E-value=41 Score=30.79 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 012863 295 ALVIGVHELGHILAAKSTG 313 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~G 313 (455)
.+..++||+||-+=+.+-+
T Consensus 136 ~a~~~AHElGHnlG~~HD~ 154 (214)
T 1r55_A 136 AAATMAHEIGHSLGLSHDP 154 (214)
T ss_dssp HHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHhcCCcCCC
Confidence 3578899999987665433
No 42
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=20.63 E-value=43 Score=34.28 Aligned_cols=20 Identities=40% Similarity=0.451 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 012863 295 ALVIGVHELGHILAAKSTGV 314 (455)
Q Consensus 295 l~iL~iHElGH~laAr~~Gv 314 (455)
++++++||+||-+=+.+-+.
T Consensus 139 ~a~t~AHElGHnlGm~HD~~ 158 (427)
T 2e3x_A 139 TAVIMAHELSHNLGMYHDGK 158 (427)
T ss_dssp HHHHHHHHHHHTTTCCCCCT
T ss_pred eeeehHHHHHHhhCCccCCC
Confidence 45689999999877665443
No 43
>1z8u_A Alpha-hemoglobin stabilizing protein; alpha haemoglobin, AHSP, oxidation, interaction, electron transport; HET: HEM; 2.40A {Homo sapiens} SCOP: a.7.11.1 PDB: 1y01_A* 1w0b_A 3ovu_A* 1w09_A 1w0a_A 3ia3_A* 1xzy_A
Probab=20.09 E-value=6.9 Score=32.97 Aligned_cols=59 Identities=15% Similarity=0.386 Sum_probs=39.7
Q ss_pred CcccccCCCChhHHHHhhcccccceeeeeccccccCceEEEEeccCCch---HHHHHHHHHHHHhh---hCCceEEE
Q 012863 148 QQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQA---AKTYEKISTRMKNK---FGDQYKLF 218 (455)
Q Consensus 148 ~~~~~~~~i~~edl~~ik~~~Fg~dtF~~t~~~~~~~gvi~rGnLR~~~---e~~y~~l~~~l~~~---fGd~y~lf 218 (455)
|+.-....||+||+.++-+ -|--||+. | ||-+++|+. |.+-+.+++.|... |=+||+-|
T Consensus 24 QQvF~~~~i~ee~MvtvV~---DWvnfYin---y------y~~~~~GeqqEqdrAlqel~qeL~tl~~pFL~KYR~f 88 (102)
T 1z8u_A 24 QQVFNDALVSEEDMVTVVE---DWMNFYIN---Y------YRQQVTGEPQERDKALQELRQELNTLANPFLAKYRDF 88 (102)
T ss_dssp TCCGGGCCCCHHHHHHHHH---HHHHHHHH---H------HTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcccCCCCCCHHHHHHHHH---HHHHHHHH---H------HHHHhcccHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3333444699999998766 47777754 2 344678865 55777777776654 56788875
Done!