BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012866
(454 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225451144|ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204989|emb|CBI34296.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/450 (76%), Positives = 389/450 (86%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
V RPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ S +R IVS
Sbjct: 70 VYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSSRTIVS 129
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
C +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ+P+IAYS+G
Sbjct: 130 CYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLIAYSIG 189
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKVFGLISKPVG
Sbjct: 190 DRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVG 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYKEAV FCDE
Sbjct: 250 HSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A SPL G+
Sbjct: 310 LHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGK 369
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
FVL GAGGAGRALAFGA+SRGA++VIFD+DF+RA SLA V G + +ED+ NFQPEKG
Sbjct: 370 QFVLVGAGGAGRALAFGARSRGAQLVIFDLDFDRANSLAHAVSGEVKLYEDVANFQPEKG 429
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
AILANATP+GMHPNTDR+PV+EETL DYQLVFD+VYTPRKTRLLK+AEAAGAIIVSGVEM
Sbjct: 430 AILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPRKTRLLKEAEAAGAIIVSGVEM 489
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
FLRQAIGQFNLFTG EAP+EFMREI+L+KF
Sbjct: 490 FLRQAIGQFNLFTGGEAPEEFMREIILSKF 519
>gi|255542470|ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548259|gb|EEF49750.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 519
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/450 (75%), Positives = 395/450 (87%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
V RPK GGLYEGDE RLEAL LA LGADYVDFELKVAS+++G+ +H +G++ IVS
Sbjct: 70 VYRPKSEGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASDLIGELKGTHHTGSKVIVS 129
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
C ++ + P++E+L LV+ MQATGADIIKLV + N+ITE+ RIF L+ HCQVPIIAYSVG
Sbjct: 130 CYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQVPIIAYSVG 189
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
ERGL+SQLLSPKF G+L+YGS++G+ + GLPT++SLR+ YKV +IN+DTKVFGL+SKPV
Sbjct: 190 ERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKVFGLVSKPVS 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGP+LHNPTFRH NYNG YVPMFVDDLK+FFS YSSPDFAGFSVGFPYKEAV++FCDE
Sbjct: 250 HSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYKEAVVEFCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
VHPLA++I AVNTIIRRP DGKLIG+NTDCEA+ITAIEDA+KE+GY +G S SPL GR
Sbjct: 310 VHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRTSSNSPLTGR 369
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
FVL GAGGAGRALAFGAKSRGAR+VIFDID ERAK LA V G A+ FE+++NF+PE G
Sbjct: 370 QFVLVGAGGAGRALAFGAKSRGARIVIFDIDLERAKFLADAVSGEAQLFENVVNFEPENG 429
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
AILANATP+GMHPNT+R+PV+E TL YQLVFDAVYTPRKTRLLK+AEAAGAIIVSGVEM
Sbjct: 430 AILANATPIGMHPNTERIPVAEATLGIYQLVFDAVYTPRKTRLLKEAEAAGAIIVSGVEM 489
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
FLRQA+GQF+LFTG+EAP EFMREIVLAKF
Sbjct: 490 FLRQAMGQFSLFTGREAPTEFMREIVLAKF 519
>gi|224130894|ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222838117|gb|EEE76482.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/450 (74%), Positives = 390/450 (86%), Gaps = 1/450 (0%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
V RPKW GG YEGDEH+RLEAL LA DLGADY+D ELKVAS ++ + + HQ+G + IVS
Sbjct: 70 VYRPKWEGGQYEGDEHRRLEALRLANDLGADYIDLELKVASELIWELKNKHQNGGKVIVS 129
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
L+ TPS+E+L +LV+ MQAT ADIIK+V + +DITE+ RIF LLSHC+VP +AYSVG
Sbjct: 130 SYLNGATPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCEVPAVAYSVG 189
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
ERGL+SQLL PKF GALVYGS++G + GLPT++SLR+ YKV+ IN+DTKVFGL+SKPVG
Sbjct: 190 ERGLISQLLCPKFGGALVYGSMEGNSIPGLPTLDSLREAYKVDCINSDTKVFGLVSKPVG 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGP+LHNPT RHVN+NGIYVPMFVDDLKKFF Y+SPDFAG+SVGFPYKEAV++FCDE
Sbjct: 250 HSKGPLLHNPTLRHVNFNGIYVPMFVDDLKKFFDVYASPDFAGYSVGFPYKEAVVQFCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
VHPLA+ I AVNTIIRRP DGKLIGYNTDCE SITAIEDA++++ Y NG S SPLAG+
Sbjct: 310 VHPLAKCIGAVNTIIRRPCDGKLIGYNTDCEGSITAIEDALRDQKYVNGR-SLNSPLAGK 368
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
FV+ GAGGAGRA+A GAKSRGAR++IFDID ERAKSLA V G A+ FE + +FQPE G
Sbjct: 369 QFVVVGAGGAGRAIAVGAKSRGARLIIFDIDLERAKSLARAVSGEAQHFESLAHFQPENG 428
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
AILANATP+GMHP+TDR+P +EETL +YQLVFDAVYTPRKTRLLKDA+AAGAI VSGVEM
Sbjct: 429 AILANATPIGMHPSTDRIPAAEETLGNYQLVFDAVYTPRKTRLLKDADAAGAITVSGVEM 488
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
FLRQAIGQFNLFTG+EAPK+FMREIVLAKF
Sbjct: 489 FLRQAIGQFNLFTGREAPKDFMREIVLAKF 518
>gi|356504076|ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 524
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/452 (74%), Positives = 387/452 (85%), Gaps = 2/452 (0%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFI 62
V+RPKW GGLYEGDE+KRLEAL LA +L AD++D ELK AS + L + +H S + I
Sbjct: 73 VNRPKWEGGLYEGDENKRLEALQLAVELSADFIDVELKAASCLPTLVEHMRNHNSHGKII 132
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 122
VSC +D TP E L LV MQATGADIIKLV DITEI RIF L +CQVP+IAYS
Sbjct: 133 VSCYVDGTTPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSLFLYCQVPLIAYS 192
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
VGERGL+SQLLSPKF G VYGSL G P+ GLP+++S+++ YK+EH+NADTKVFGLISKP
Sbjct: 193 VGERGLISQLLSPKFGGFFVYGSLAGNPIPGLPSLDSIQEAYKLEHVNADTKVFGLISKP 252
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
V HS+GPILHNP+F+ VNYNGIYVPMFVDDLKKFFSTY SPDF+GFSVG PYKE V++FC
Sbjct: 253 VSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSVGIPYKEEVLRFC 312
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
DEVHPLAQ+I AVNTIIRRP DGKL+GYNTDCEA+ITAIEDA+ E G +G AS GSPLA
Sbjct: 313 DEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGCNDGEASLGSPLA 372
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
GR+FVL GAGGAG+ALAFGAKSRGAR+VIFDIDF+RAKSLA V G A+PF++++NFQPE
Sbjct: 373 GRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDFDRAKSLACAVFGEAQPFKELVNFQPE 432
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
KGAILANATP+GMHPNTDR+PV+E TL DY+LVFDAVYTPR+TRLL +A+AAGAI V+GV
Sbjct: 433 KGAILANATPVGMHPNTDRIPVAEATLEDYRLVFDAVYTPRRTRLLNEADAAGAITVAGV 492
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
EMFLRQAIGQFNLFTG EAP+EFMREIVL+KF
Sbjct: 493 EMFLRQAIGQFNLFTGLEAPEEFMREIVLSKF 524
>gi|224125426|ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857959|gb|EEE95506.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/450 (72%), Positives = 390/450 (86%), Gaps = 1/450 (0%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
V RP+W GG YEGDEH RLEAL LA +LGADY+D ELKVAS+++ + + HQ+G + IVS
Sbjct: 70 VYRPRWEGGQYEGDEHTRLEALRLAHELGADYIDVELKVASDLVREVKNKHQTGGKVIVS 129
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
L TPS+EDL +LV+ MQAT ADIIK+V + NDITE+ RIF LLSH QVP +AYS+G
Sbjct: 130 SYLSGATPSKEDLSHLVASMQATKADIIKVVSNANDITELDRIFHLLSHMQVPAVAYSLG 189
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
ERGL+SQLL PKF GALVYG+++G + GLPT++SLR+ YKVE+IN+DTKVFGL+SKPV
Sbjct: 190 ERGLISQLLCPKFGGALVYGAMEGNSIPGLPTLDSLREAYKVENINSDTKVFGLVSKPVS 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGPILHNP FRH N+NGIYVPMFVDDLK+FF Y+SPDFAG+SVGFPYKEAV++FCDE
Sbjct: 250 HSKGPILHNPAFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYKEAVVQFCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
VHPLA++I AVNTIIR+PSDGKLIGYNTDCE SI +IEDA+K++ Y NG AS SPLAG+
Sbjct: 310 VHPLAKSIGAVNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYING-ASLNSPLAGK 368
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
FV+ GAGGAGRA+A GAKSRGARV+IFDID +RAKSLA V G A+ F+ + +FQPEKG
Sbjct: 369 QFVVVGAGGAGRAIAVGAKSRGARVIIFDIDLDRAKSLAQVVSGEAQHFDSLAHFQPEKG 428
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
AILANATP+GMHP+TDR+PV+E TL +YQLVFDAVYTPRKTRLL+DA+AAGAI VSGVEM
Sbjct: 429 AILANATPIGMHPSTDRIPVAEATLGNYQLVFDAVYTPRKTRLLEDADAAGAITVSGVEM 488
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
FL+QAIGQF+LFTG+EAPK+FMREIVLAKF
Sbjct: 489 FLKQAIGQFSLFTGREAPKDFMREIVLAKF 518
>gi|147837952|emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
Length = 1071
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/457 (72%), Positives = 375/457 (82%), Gaps = 21/457 (4%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
V RPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ S +R IVS
Sbjct: 70 VYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSSRTIVS 129
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
C +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ+P+IAYS+G
Sbjct: 130 CYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLIAYSIG 189
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKVFGLISKPVG
Sbjct: 190 DRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVG 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYKEAV FCDE
Sbjct: 250 HSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A SPL G+
Sbjct: 310 LHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGK 369
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE---------------------RAKSLA 343
FVL GAGGAGRALAFGA+SRGA++VIFD+DFE RA SLA
Sbjct: 370 QFVLVGAGGAGRALAFGARSRGAQLVIFDLDFEKSIPGRITALLSNLHCSSPKDRANSLA 429
Query: 344 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
V G + +ED+ NFQPEKGAILANATP+GMHPNTDR+PV+EETL DYQLVFD+VYTPR
Sbjct: 430 HAVSGEVKLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPR 489
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
KTRLLK+AEAAGAIIVSGVEMFLRQAIGQFNLFTG E
Sbjct: 490 KTRLLKEAEAAGAIIVSGVEMFLRQAIGQFNLFTGGE 526
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/448 (50%), Positives = 302/448 (67%), Gaps = 8/448 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y + IVS +
Sbjct: 624 RPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQNFKVIVSSH 683
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP IA +GER
Sbjct: 684 NFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTIAIVMGER 743
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV+G+I KPVG
Sbjct: 744 GLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYGIIGKPVG 803
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPYKEAVMKFCD 243
HSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+KE +K D
Sbjct: 804 HSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMD 863
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA-SFGSPLA 302
+ P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG++ + GSPLA
Sbjct: 864 TIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGSSPAVGSPLA 919
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
G++FV+ GAGGAG++LA+GAK +GARVV+ + FERAK LA V G A +I NF PE
Sbjct: 920 GKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAEIENFHPE 979
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
+G ILAN T +GM P + P+ + L+ Y LVFDA+YTP+ TRLL++A+ +G IIV G
Sbjct: 980 EGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESGKIIVYGT 1039
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIV 450
EM +RQ Q+ FTG AP+E RE++
Sbjct: 1040 EMLIRQGFEQYKNFTGLPAPEELFRELM 1067
>gi|57920902|gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
[Nicotiana tabacum]
Length = 521
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 318/453 (70%), Positives = 373/453 (82%), Gaps = 4/453 (0%)
Query: 5 VSRPKWAGGLYEGDE---HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 61
V RP W G +E D+ HK+LE L A++LGADY++ +LK+AS+ K+ SG +
Sbjct: 70 VYRPIWEGNEFEEDDDHIHKQLEVLRWAKELGADYIELDLKIASDFTKKEKPRWSSGCKV 129
Query: 62 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 121
I SC +D T S+EDL +V+ MQ+TGADI+K+V + NDITE+ ++F LLSHCQVP+IAY
Sbjct: 130 IASCFVDNVT-SKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHCQVPLIAY 188
Query: 122 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
S+GERGL+SQLL PKF LVYGSL V GLPT+ SLRQ Y V+ ++ DTKVFGLISK
Sbjct: 189 SLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTDTKVFGLISK 248
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSKGPILHNPTFRHV YNGIYVPMFVDDLK+FF YSSPDFAGFSVG PYKEAV+ F
Sbjct: 249 PVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAVVSF 308
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV PLA++I AVNTII+RP DGKLIGYNTDCEASITAIEDA+K G NG A SPL
Sbjct: 309 CDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTNGAAFLPSPL 368
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AG++FVL GAGGAGRALAFGAKSR A +VIFDIDF+RAK+LA+ V G A PFE++ +FQP
Sbjct: 369 AGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDFDRAKALAAAVSGEALPFENLASFQP 428
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
EKGAILANATP+GMHPN DR+PVSE +L+DY +VFDAVYTPRKT LLKDAEAAGAI VSG
Sbjct: 429 EKGAILANATPIGMHPNKDRIPVSEASLKDYVVVFDAVYTPRKTTLLKDAEAAGAITVSG 488
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
VEMFLRQAIGQF+LFT +AP+EFMR+IV+AKF
Sbjct: 489 VEMFLRQAIGQFHLFTRTKAPEEFMRDIVMAKF 521
>gi|356573042|ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 524
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 308/452 (68%), Positives = 370/452 (81%), Gaps = 2/452 (0%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFI 62
V++PKW GGLYEGDE+ +LEAL LA +LGAD+++ +LK AS + L + +H S + I
Sbjct: 73 VNQPKWEGGLYEGDENMQLEALQLAVELGADFIEVQLKAASCLPTLVEHKRNHNSHGKII 132
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 122
VSC +D P +E+L LV MQ T ADIIKLV DITEI +IF L +CQVP+IAYS
Sbjct: 133 VSCYVDGIIPPQEELLQLVELMQGTEADIIKLVTHAADITEIIKIFSLFPYCQVPLIAYS 192
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
VGERGL+SQLLS KF G VY SL G P+ GLP+++++++ YK+EH+ ADTKVFGLISKP
Sbjct: 193 VGERGLISQLLSQKFGGFFVYESLAGNPIPGLPSLDNIQEAYKLEHVKADTKVFGLISKP 252
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
+ HSKGPILHNP FRH+NYNGIYVPMFVDDLK+FF+TY PDF+GF VG PYKE +++FC
Sbjct: 253 ISHSKGPILHNPPFRHINYNGIYVPMFVDDLKEFFNTYPCPDFSGFIVGIPYKEEILRFC 312
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
DEVHPLAQ+I AVNTIIRR GKL+GYNT CEA+ITAIEDA+ E G +G AS GSPLA
Sbjct: 313 DEVHPLAQSIGAVNTIIRRARHGKLVGYNTHCEAAITAIEDALIEHGCNDGGASLGSPLA 372
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
GR+FVL GAGGAG ALAFG+KSRGA +VIFDI+F+RAKSLA V G A+PF++++NFQPE
Sbjct: 373 GRLFVLVGAGGAGIALAFGSKSRGALLVIFDINFDRAKSLACAVFGEAQPFKELVNFQPE 432
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
K AILANATP+GM PNTDR+PV+E TL D +LVFDAVY R+TRLLK+A+AAGAI V GV
Sbjct: 433 KEAILANATPVGMLPNTDRIPVAEATLEDXRLVFDAVYRLRRTRLLKEADAAGAITVGGV 492
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
EMFLRQAIGQFNLFT EAP+EFMREIVL+KF
Sbjct: 493 EMFLRQAIGQFNLFTSLEAPEEFMREIVLSKF 524
>gi|255559348|ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 515
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/449 (61%), Positives = 351/449 (78%), Gaps = 1/449 (0%)
Query: 7 RPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
RPK + GD K L+ L LA DL ++V+ E +VAS++ +Y ++S + IVS
Sbjct: 67 RPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSGKLIVSS 126
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 125
++ PS E LG L++ +Q+TGAD+IKLV +V+ IT++A +F++L+HCQVP+IA +VG
Sbjct: 127 YVNGGKPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPLIALAVGS 186
Query: 126 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGH 185
RGL+SQLL PKF G LVYGSL+ V G+PT+ SLR YK+E+IN+DTKVFGLIS PVGH
Sbjct: 187 RGLISQLLGPKFGGFLVYGSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGLISNPVGH 246
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 245
SKGPILHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA + CDEV
Sbjct: 247 SKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAVSCCDEV 306
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
HPLA++I AVNTI+RRP+DGKL+GYNTDCEASITAIEDA++ER N A SPLAG+
Sbjct: 307 HPLAKSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDTSPLAGKT 366
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
FVL GAGGAGRALAFGA SRGARVV+F+ +FERAKSLA+ V G A P++ + FQ E
Sbjct: 367 FVLIGAGGAGRALAFGASSRGARVVVFNRNFERAKSLANAVSGEALPYKALDRFQRENDM 426
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
ILANA+ +GM PNT + PVS+E L+ Y+LVFDAVYTPR TRLL++A+ GA++VSGVEMF
Sbjct: 427 ILANASAVGMEPNTHQSPVSKEALKSYELVFDAVYTPRNTRLLQEAKEVGAVVVSGVEMF 486
Query: 426 LRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+RQA+GQF LFTG AP+ FMR++VL +F
Sbjct: 487 IRQALGQFRLFTGGLAPEAFMRKLVLEQF 515
>gi|224128592|ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 504
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/432 (61%), Positives = 338/432 (78%), Gaps = 11/432 (2%)
Query: 23 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 82
L+ L LA DL ++V+ + +VAS +Y ++S T+ IVS ++ PS E+LGYL++
Sbjct: 84 LQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNTKLIVSSYVNGRKPSAEELGYLIA 143
Query: 83 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 142
MQ+TGAD++KLV V IT++A +F +L+HCQ+P+IA +VG RGL+SQLL PKF G LV
Sbjct: 144 CMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLIALAVGSRGLISQLLGPKFGGFLV 203
Query: 143 YGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 202
YGSL V G+PT+ SLRQ YK+E+INADTKVFGLIS PVGHSKGP+LHNP FRH YN
Sbjct: 204 YGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISNPVGHSKGPVLHNPAFRHTGYN 263
Query: 203 GIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRP 262
GIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA + CDEVHPLA++I AVNTI+RRP
Sbjct: 264 GIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLAKSIGAVNTIVRRP 323
Query: 263 SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA 322
+DGKL+GYNTDC+ASI+AIEDA+ SPL+G+ FVL GAGGAGRALAFGA
Sbjct: 324 TDGKLVGYNTDCDASISAIEDALT-----------ASPLSGKTFVLIGAGGAGRALAFGA 372
Query: 323 KSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRV 382
KSRGARV+IF+ ++ERA++LA V G A P+E + F+P G ILANA+ +GM PN+D+
Sbjct: 373 KSRGARVIIFNRNYERARALAKAVSGEALPYESLDRFRPVNGMILANASAIGMEPNSDQS 432
Query: 383 PVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
PVS+E L+ +LVFDAVYTPR TRLL++A+ GA++VSGVEMF+RQA+GQF LFTG AP
Sbjct: 433 PVSKEILKACELVFDAVYTPRNTRLLREAKEVGAVVVSGVEMFIRQALGQFRLFTGGLAP 492
Query: 443 KEFMREIVLAKF 454
+ FMR++VL +F
Sbjct: 493 EAFMRKLVLEQF 504
>gi|116787099|gb|ABK24375.1| unknown [Picea sitchensis]
Length = 514
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/453 (58%), Positives = 334/453 (73%), Gaps = 9/453 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG YE DE KRL+ L LA +LGAD++D EL+VA + + + S + IVS +
Sbjct: 66 RLKSEGGKYEVDEKKRLDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNCKIIVSNH 125
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+ TPS EDL +LV MQ+TGADI+K+V + +IT+++R+FQL+ HCQVPIIA G+R
Sbjct: 126 ISGRTPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPIIACVTGDR 185
Query: 127 GLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
GL+SQLL PKF G L+YGS+ TP G P + L YK+ +N+DTKVFG+I+ P
Sbjct: 186 GLISQLLGPKFGGYLIYGSIGSGKDSTP--GQPKLADLTGHYKIGRLNSDTKVFGVIANP 243
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
VGHSKGPILHN FR +NG+YVP+ VD+L F YS+PDFAGFSVG P+KEA + C
Sbjct: 244 VGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKEAAVTCC 303
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 301
DEV PLAQ+I AVNTI+RR SDGKLIGYNTDCE +I+AIED +K E G N +S SPL
Sbjct: 304 DEVQPLAQSIGAVNTIVRRQSDGKLIGYNTDCEGAISAIEDGLKGETGSINSGSS--SPL 361
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR FVL GAGGAGRALAFGAK RGA V+I + ++ERAKSLA+ V G A E + +F+P
Sbjct: 362 AGRTFVLVGAGGAGRALAFGAKQRGAHVIIANRNYERAKSLANSVGGEAIAVEQLNSFRP 421
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E GA+LAN + +GM PN + P+S+E L Y LVFDAVYTPR+TRLL++A+ AG I+VSG
Sbjct: 422 ETGAVLANTSAVGMQPNVNATPLSKEALGAYTLVFDAVYTPRETRLLREAKEAGKIVVSG 481
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+EMF+RQAIGQ+ LFTGK AP E +R+IV+ F
Sbjct: 482 LEMFIRQAIGQYELFTGKPAPTELIRKIVMKDF 514
>gi|148906893|gb|ABR16592.1| unknown [Picea sitchensis]
gi|148907829|gb|ABR17039.1| unknown [Picea sitchensis]
Length = 518
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/447 (56%), Positives = 332/447 (74%), Gaps = 3/447 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE KRL+ L LA +LGADY+D EL+VAS+ + + + ++ IVS +
Sbjct: 70 RPKWEGGAYEGDEGKRLDVLRLAMELGADYIDVELQVASDFIKSISNKKRENSKIIVSNH 129
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDLG LV+R+Q+TGADI+K+ + DIT++ARIF++L++CQVPI+A + ER
Sbjct: 130 NYQFTPSLEDLGLLVARIQSTGADIVKIATTATDITDVARIFRVLAYCQVPILALVMSER 189
Query: 127 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LL PKF G L +GSL+ G T+ + YK+ + DTKVFGLI PV
Sbjct: 190 GLISRLLCPKFGGYLTFGSLEAGKESAPGQATLADMLNIYKIRGLGRDTKVFGLIGNPVS 249
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSKGP LHN F + ++ IYVP VDD+K+F YSSPDFAGFSV P+KEA ++ CDE
Sbjct: 250 HSKGPTLHNRAFGEIGFDAIYVPFLVDDIKEFLKVYSSPDFAGFSVTIPHKEAALECCDE 309
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A++I AVNTI+RR SDGKLIGYNTD +I+AIEDA+K + + G + SPLAG+
Sbjct: 310 VDPIARSIGAVNTIVRRQSDGKLIGYNTDSVGAISAIEDALKGK-HNYGDWTHSSPLAGK 368
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+F++ GAGGAG+ALAFGAK +GARVVI + ++ERAK+LA V G A P + + +F+PE G
Sbjct: 369 LFLIVGAGGAGKALAFGAKQKGARVVIANRNYERAKALAIQVEGEAIPLDKLDHFRPETG 428
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GMHPN + P+S+E L Y +VFDAVYTP+ TRLL+DAEA GA++V G+EM
Sbjct: 429 MILANTTSMGMHPNVSQTPISKEALSSYAVVFDAVYTPKWTRLLQDAEATGALVVCGLEM 488
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVL 451
F+RQA+GQF LFTG +AP++ MREIVL
Sbjct: 489 FIRQAMGQFELFTGCKAPEKLMREIVL 515
>gi|302817344|ref|XP_002990348.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
gi|300141910|gb|EFJ08617.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
Length = 536
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/451 (54%), Positives = 321/451 (71%), Gaps = 13/451 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRFIVSC 65
RP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR IVS
Sbjct: 87 RPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRIIVSN 146
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 121
+ TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H Q VP IA
Sbjct: 147 HNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQLSLKVPTIAL 206
Query: 122 SVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLI 179
+G++GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V+G+I
Sbjct: 207 VMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGII 266
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
PVGHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+KE +
Sbjct: 267 GNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDAL 326
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
K CDEV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY
Sbjct: 327 KCCDEVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHGS-----Q 380
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 359
PL+G++ V+ GAGGAG+ALAFGAK RGARVVI + +FERAK LA V A E + +F
Sbjct: 381 PLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLSSF 440
Query: 360 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
QPE G ILAN+T +GM PN P+ + L+ Y +VFDAVYTP +TRLL++A+ +GA++V
Sbjct: 441 QPENGMILANSTSVGMQPNVQDTPIPKAALKGYSVVFDAVYTPLETRLLREAKESGAVVV 500
Query: 420 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
SG+EMF+RQAIGQF LFTG+ APK MREIV
Sbjct: 501 SGLEMFIRQAIGQFELFTGQPAPKSVMREIV 531
>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
regia]
Length = 508
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/446 (53%), Positives = 313/446 (70%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y ++ IVS +
Sbjct: 62 RPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSSH 121
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+TPS EDLG LV+R+QATGADI+K+ + +I ++ARIFQ+ H QVPII +GER
Sbjct: 122 NYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGER 181
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S++L PKF G L +G+++ V G PT++ L Y + I DTKVFG+I KPV
Sbjct: 182 GFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPVH 241
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PIL+N F+ V +NG+Y+P+ VDD+ F TYSS DFAGFS P+KEA +K CDE
Sbjct: 242 HSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALKCCDE 301
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A++I AVN IIRRP+DGKL+GYNTD +I+AIED + RG N + + SPLAG+
Sbjct: 302 VDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGL--RGSHNSSNTADSPLAGK 359
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + ++RA+ LA + G A D+ NF PE G
Sbjct: 360 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPEDG 419
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN+T +GM P D P+ + LR Y LVFDAVYTP+ TRLL++AE +GA IV+G+EM
Sbjct: 420 MILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLEM 479
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA QF FTG APKE R+++
Sbjct: 480 FIGQAYEQFERFTGLPAPKELFRKVM 505
>gi|413916609|gb|AFW56541.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
gi|413916610|gb|AFW56542.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
Length = 534
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/452 (53%), Positives = 310/452 (68%), Gaps = 7/452 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS +
Sbjct: 84 RPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII +
Sbjct: 144 NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVM 203
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I K
Sbjct: 204 NDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGK 263
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+KEA ++
Sbjct: 264 PVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRC 323
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T SPL
Sbjct: 324 CDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPL 381
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A D+ N+ P
Sbjct: 382 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYHP 441
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 442 EEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVSG 501
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 502 LEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTK 533
>gi|302795227|ref|XP_002979377.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
gi|300153145|gb|EFJ19785.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
Length = 498
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/447 (54%), Positives = 318/447 (71%), Gaps = 17/447 (3%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRFIVSC 65
RP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR IVS
Sbjct: 61 RPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRIIVSN 120
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 125
+ TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H QVP IA +G+
Sbjct: 121 HNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQVPTIALVMGQ 180
Query: 126 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 183
+GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V+G+I PV
Sbjct: 181 KGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGIIGNPV 240
Query: 184 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
GHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+KE +K CD
Sbjct: 241 GHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDALKCCD 300
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
EV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY PL+G
Sbjct: 301 EVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHG-----SQPLSG 354
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 363
++ V+ GAGGAG+ALAFGAK RGARVVI + +FERAK LA V A E + +FQPE
Sbjct: 355 KLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLSSFQPET 414
Query: 364 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 423
G ILAN+T +GM PN L+ Y +VFDAVYTP +TRLL++A+ +GA++VSG+E
Sbjct: 415 GMILANSTSVGMQPNA--------ALKGYSVVFDAVYTPLETRLLREAKESGAVVVSGLE 466
Query: 424 MFLRQAIGQFNLFTGKEAPKEFMREIV 450
MF+RQAIGQF LFTG+ APK MREIV
Sbjct: 467 MFIRQAIGQFELFTGQPAPKSVMREIV 493
>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 527
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/450 (54%), Positives = 322/450 (71%), Gaps = 12/450 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFI 62
RPKW GG+Y+GDE+KRL+AL LA +LGADY+D EL+VA +I GK ++ T+ I
Sbjct: 81 RPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQVAHEFYDSIRGKTFNK----TKVI 136
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 122
VS + TPS EDLG LV+R+QATGADI+K+ + DIT++AR+FQ++ H QVP I
Sbjct: 137 VSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPFIGLV 196
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 180
+G+RGL+S++LS KF G L +G+L+ V G PT++ L Y + + DTKVFG+I
Sbjct: 197 MGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDLLYLYNLRQLAPDTKVFGIIG 256
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
KPVGHSK PIL N F+ + NG+Y+ + VDDL F TYSS DF GFSV P+KE +K
Sbjct: 257 KPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTYSSTDFVGFSVTIPHKETALK 316
Query: 241 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 300
CDEV P+A++I AVN I+RRP+DGKLIGYNTD +ITAIE+ + RG NG+++ SP
Sbjct: 317 CCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITAIENGL--RGKHNGSSTTISP 374
Query: 301 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 360
LAG++FV+ GAGGAG+ALA+GAK++GARVVI + ++ A+ LA + G A D+ N+
Sbjct: 375 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHARKLAYAIGGDALALADLDNYH 434
Query: 361 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 420
PE G ILAN T +GM P D PVS+ L+ Y LVFDAVYTP+ TRLLK+AE +GA IV+
Sbjct: 435 PEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAVYTPKITRLLKEAEESGATIVT 494
Query: 421 GVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
G+EMF+ QA GQ+ FTG APKE R+I+
Sbjct: 495 GLEMFMGQAYGQYENFTGLPAPKELFRKIM 524
>gi|147837950|emb|CAN60561.1| hypothetical protein VITISV_034024 [Vitis vinifera]
Length = 531
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/447 (52%), Positives = 311/447 (69%), Gaps = 5/447 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 85 RPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGKVKIIVSSH 144
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I ++ ER
Sbjct: 145 NYQNTPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIAMAER 204
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I KP+G
Sbjct: 205 GLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIGKPIG 264
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++ CDE
Sbjct: 265 HSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLRCCDE 324
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSPLAG+
Sbjct: 325 IDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSPLAGK 381
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF PE G
Sbjct: 382 LFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFHPEDG 441
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV G EM
Sbjct: 442 MILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVYGTEM 501
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVL 451
F+ QA QF FTG APKE +RE+++
Sbjct: 502 FINQAFVQFERFTGLPAPKELIREVLV 528
>gi|225451148|ref|XP_002270232.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 531
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/447 (52%), Positives = 311/447 (69%), Gaps = 5/447 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 85 RPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKIIVSSH 144
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I ++ ER
Sbjct: 145 NYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIAMAER 204
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I KP+G
Sbjct: 205 GLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIGKPIG 264
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++ CDE
Sbjct: 265 HSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLRCCDE 324
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSPLAG+
Sbjct: 325 IDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSPLAGK 381
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF PE G
Sbjct: 382 LFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFHPEDG 441
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV G EM
Sbjct: 442 MILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVYGTEM 501
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVL 451
F+ QA QF FTG APKE +RE+++
Sbjct: 502 FINQAFVQFERFTGLPAPKELIREVLV 528
>gi|298204991|emb|CBI34298.3| unnamed protein product [Vitis vinifera]
Length = 600
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/447 (52%), Positives = 311/447 (69%), Gaps = 5/447 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 154 RPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKIIVSSH 213
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I ++ ER
Sbjct: 214 NYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIAMAER 273
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I KP+G
Sbjct: 274 GLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIGKPIG 333
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++ CDE
Sbjct: 334 HSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLRCCDE 393
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSPLAG+
Sbjct: 394 IDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSPLAGK 450
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF PE G
Sbjct: 451 LFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFHPEDG 510
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV G EM
Sbjct: 511 MILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVYGTEM 570
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIVL 451
F+ QA QF FTG APKE +RE+++
Sbjct: 571 FINQAFVQFERFTGLPAPKELIREVLV 597
>gi|326502876|dbj|BAJ99066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/452 (53%), Positives = 310/452 (68%), Gaps = 9/452 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS +
Sbjct: 84 RPKWEGGEYEGDDEPRFEALQLAMELGAEYVDIELKVADKFIKFMSGKKPENCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII +
Sbjct: 144 NYDNTPSAEELASLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGLVM 203
Query: 124 GERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PKF G L +GSL KG PT L Y + I DTKVFG+I
Sbjct: 204 NDRGFISRVLCPKFGGYLTFGSLEKGKESAAAQPTAADLINVYNIRQIGPDTKVFGIIGN 263
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V + +YVP VDDL KF STYSSPDFAGFS P+KEA ++
Sbjct: 264 PVGHSKSPILHNEAFRSVGLHAVYVPFLVDDLAKFLSTYSSPDFAGFSCTIPHKEAAVRC 323
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTIIR+P DGKL+GYNTD +I+AIED I+ T S SPL
Sbjct: 324 CDEVDPIARDIGAVNTIIRKP-DGKLVGYNTDYVGAISAIEDGIRA---TQPTHSTTSPL 379
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + G A ++ N+ P
Sbjct: 380 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLAELENYHP 439
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 440 EEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 499
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 500 LEMFIRQAMGQFEHFTGMPAPDSLMRDIVLRK 531
>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/446 (53%), Positives = 310/446 (69%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + + IVS +
Sbjct: 48 RPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSH 107
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H QVP+I +GER
Sbjct: 108 NYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGER 167
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L PKF+G L +GSL+ V G PT++ L Y + DTKVFG+I KPV
Sbjct: 168 GLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVS 227
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ V +NG+YV + VDD+ KFF TYS+ DFAGFS P+KEA +K CDE
Sbjct: 228 HSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDE 287
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A++I AVN IIRRPSDGKL GYNTD +I+AIED +++ + T+ GSPLAG+
Sbjct: 288 VSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS--GSPLAGK 345
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + + RA+ LA V G A D+ NF PE G
Sbjct: 346 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENG 405
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D P+S+ L+ Y LVFDA+YTP+ TRLL++A+ +GA IV+G+EM
Sbjct: 406 MILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEM 465
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA QF FTG APKE ++ +
Sbjct: 466 FIGQAYEQFERFTGLPAPKELFKQFI 491
>gi|195641452|gb|ACG40194.1| shikimate dehydrogenase [Zea mays]
Length = 540
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/434 (54%), Positives = 301/434 (69%), Gaps = 4/434 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS +
Sbjct: 84 RPKWEGGEYEGDDDSRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQVPII + +R
Sbjct: 144 NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQVPIIGLLMNDR 203
Query: 127 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I KPVG
Sbjct: 204 GFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVG 263
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+KEA ++ CDE
Sbjct: 264 HSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDE 323
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T SPLAGR
Sbjct: 324 VDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPLAGR 381
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A D+ N+ PE+G
Sbjct: 382 LFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYHPEEG 441
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A GA +VSG+EM
Sbjct: 442 MILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLEM 501
Query: 425 FLRQAIGQFNLFTG 438
F+RQA+GQF FTG
Sbjct: 502 FIRQAMGQFEHFTG 515
>gi|255542472|ref|XP_002512299.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548260|gb|EEF49751.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 524
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 299/448 (66%), Gaps = 8/448 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGDE KR +AL A LGA+YVD EL+VA Y + IVS +
Sbjct: 77 RPIWEGGQYEGDETKRQDALRFAMQLGANYVDVELEVAHEFNNSIYGKKPDNFKVIVSSH 136
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E + LV+R+QATGADI+K+ + DIT+ ARIFQ++ HCQVP+I +GER
Sbjct: 137 NFHNTPSSEAIANLVARIQATGADIVKIATTALDITDCARIFQIMVHCQVPVIGIVMGER 196
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV+G+I KPVG
Sbjct: 197 GLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIRPDTKVYGIIGKPVG 256
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-GFSVGFPYKEAVMKFCD 243
HSK P+L N F+ V N +YV VDD++KFFSTYSS DFA G S P+KE +K D
Sbjct: 257 HSKSPLLFNAAFKSVGLNAVYVHFLVDDVEKFFSTYSSVDFASGCSCTIPHKEVALKCMD 316
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG-SPLA 302
E+ P+A+ I A+N IIRRP D L+ YNTD +I AIED ++E NG G SPLA
Sbjct: 317 EIDPIAKKIGAINNIIRRP-DATLMAYNTDYIGAIDAIEDGLREL---NGAVPAGTSPLA 372
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
G++FV+ GAGGAG++LA+GA +GARVV+ + FERAK LA V G A +++ NF PE
Sbjct: 373 GKLFVVLGAGGAGKSLAYGAAQKGARVVVANRTFERAKELADKVNGQAMTLDEVQNFHPE 432
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
+G +LAN T +GM PN D P+++ L+ Y +VFDA+YTP+ TRLL++A+ +GA+IV G
Sbjct: 433 EGMVLANTTSVGMKPNIDATPLAKHALKHYCVVFDAIYTPKDTRLLREAKESGAVIVYGT 492
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIV 450
EM +RQ Q+ FTG AP+E R+++
Sbjct: 493 EMLIRQGFEQYKNFTGLPAPEELFRQLM 520
>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 522
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 310/449 (69%), Gaps = 7/449 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + + IVS +
Sbjct: 72 RPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSH 131
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV---PIIAYSV 123
TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H QV P+I +
Sbjct: 132 NYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVPVIGLVM 191
Query: 124 GERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISK 181
GERGL+S++L PKF+G L +GSL+ V G PT++ L Y + DTKVFG+I K
Sbjct: 192 GERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGK 251
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PV HSK P L+N F+ V +NG+YV + VDD+ KFF TYS+ DFAGFS P+KEA +K
Sbjct: 252 PVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKC 311
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A++I AVN IIRRPSDGKL GYNTD +I+AIED +++ + T+ GSPL
Sbjct: 312 CDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS--GSPL 369
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AG++FV+ GAGGAG+ALA+GAK +GARVVI + + RA+ LA V G A D+ NF P
Sbjct: 370 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHP 429
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E G ILAN T +GM P D P+S+ L+ Y LVFDA+YTP+ TRLL++A+ +GA IV+G
Sbjct: 430 ENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTG 489
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+EMF+ QA QF FTG APKE ++ +
Sbjct: 490 LEMFIGQAYEQFERFTGLPAPKELFKQFI 518
>gi|218186992|gb|EEC69419.1| hypothetical protein OsI_38581 [Oryza sativa Indica Group]
Length = 531
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/453 (52%), Positives = 311/453 (68%), Gaps = 9/453 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS +
Sbjct: 82 RPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVSSH 141
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII +
Sbjct: 142 NFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVM 201
Query: 124 GERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I K
Sbjct: 202 NDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGIIGK 261
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA ++
Sbjct: 262 PVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAVRC 321
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ T + SPL
Sbjct: 322 CDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRA---SQPTDTTTSPL 377
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + A ++ N+ P
Sbjct: 378 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHP 437
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 438 EEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 497
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 498 LEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|225451146|ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204990|emb|CBI34297.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/448 (50%), Positives = 302/448 (67%), Gaps = 8/448 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y + IVS +
Sbjct: 84 RPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQNFKVIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP IA +GER
Sbjct: 144 NFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTIAIVMGER 203
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV+G+I KPVG
Sbjct: 204 GLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYGIIGKPVG 263
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPYKEAVMKFCD 243
HSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+KE +K D
Sbjct: 264 HSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMD 323
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA-SFGSPLA 302
+ P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG++ + GSPLA
Sbjct: 324 TIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGSSPAVGSPLA 379
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
G++FV+ GAGGAG++LA+GAK +GARVV+ + FERAK LA V G A +I NF PE
Sbjct: 380 GKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAEIENFHPE 439
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
+G ILAN T +GM P + P+ + L+ Y LVFDA+YTP+ TRLL++A+ +G IIV G
Sbjct: 440 EGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESGKIIVYGT 499
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIV 450
EM +RQ Q+ FTG AP+E RE++
Sbjct: 500 EMLIRQGFEQYKNFTGLPAPEELFRELM 527
>gi|212274689|ref|NP_001130790.1| shikimate dehydrogenase1 [Zea mays]
gi|194690122|gb|ACF79145.1| unknown [Zea mays]
gi|413916608|gb|AFW56540.1| shikimate dehydrogenase [Zea mays]
Length = 543
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/437 (54%), Positives = 301/437 (68%), Gaps = 7/437 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS +
Sbjct: 84 RPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII +
Sbjct: 144 NYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVM 203
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I K
Sbjct: 204 NDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGK 263
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+KEA ++
Sbjct: 264 PVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRC 323
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T SPL
Sbjct: 324 CDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPL 381
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A D+ N+ P
Sbjct: 382 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLENYHP 441
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 442 EEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGATVVSG 501
Query: 422 VEMFLRQAIGQFNLFTG 438
+EMF+RQA+GQF FTG
Sbjct: 502 LEMFIRQAMGQFEHFTG 518
>gi|356577650|ref|XP_003556937.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 479
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/453 (50%), Positives = 309/453 (68%), Gaps = 18/453 (3%)
Query: 8 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFIV 63
PK GG+Y+G E+KRL+AL LA +LGADYVD +L+VA +I GK ++ T+ IV
Sbjct: 32 PKLEGGMYDGGENKRLDALRLAMELGADYVDVQLQVAYEFYDSIRGKTFNK----TKVIV 87
Query: 64 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSV 123
S + TPS EDLG LV+R+QATGADI+K+ + DIT++AR+FQ++ H QVP I
Sbjct: 88 SSHNYQLTPSMEDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPFIGLVC 147
Query: 124 GERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHIN----ADTKVFG 177
G+RGL+S +L KF G + +G+L+ V G PT++ L Y + ++ DTKVFG
Sbjct: 148 GDRGLISHILCAKFGGYVTFGTLESRVVSASGQPTLKDLLYLYNLRQLSNKLTPDTKVFG 207
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 237
+I KPV HSK PIL N F+ + NG+YV + VDDL F YSS +F GF V P+KEA
Sbjct: 208 IIGKPVSHSKSPILFNEVFKSIGLNGVYVFLLVDDLANFLRAYSSTEFVGFGVTIPHKEA 267
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
+K CDEV P+A++I AVN I+RRP+DGKLIGYNTD ++TAIED + RG NG+++
Sbjct: 268 AIKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAVTAIEDGL--RGKHNGSSTT 325
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 357
SPLA ++FV+ GA AG+ALA+GAK++GARVVI + F+RA+ LA + G A D+
Sbjct: 326 ISPLASKLFVVIGADVAGKALAYGAKAKGARVVIANRTFDRARELADAIGGDALALSDLD 385
Query: 358 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 417
N+ PE G IL N T +GM P D PVS+ L+ Y LVFDAV TP+ TRLLK+AE +GA
Sbjct: 386 NYHPEDGMILTNTTSIGMQPKVDEKPVSKHALKYYSLVFDAVNTPKITRLLKEAEESGAT 445
Query: 418 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
IV+G+EMF+ + Q+ FTG APKE R+I+
Sbjct: 446 IVTGLEMFMGRX--QYENFTGLRAPKELFRKIM 476
>gi|222617206|gb|EEE53338.1| hypothetical protein OsJ_36349 [Oryza sativa Japonica Group]
Length = 531
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/453 (52%), Positives = 310/453 (68%), Gaps = 9/453 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS +
Sbjct: 82 RPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVSSH 141
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII +
Sbjct: 142 NFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVM 201
Query: 124 GERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I K
Sbjct: 202 NDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGIIGK 261
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA ++
Sbjct: 262 PVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAVRC 321
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ T + SPL
Sbjct: 322 CDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRA---SQPTDTTTSPL 377
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + A ++ N+ P
Sbjct: 378 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHP 437
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+ ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 438 EEEMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 497
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 498 LEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]
Length = 515
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/453 (51%), Positives = 319/453 (70%), Gaps = 15/453 (3%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFI 62
RPKW GG+YEGDE++RL+AL LA +L ADY+D ELKVA +I GK Y+ T+ I
Sbjct: 66 RPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNK----TKVI 121
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV---PII 119
VS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+F+++ H QV P I
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRHVPFI 181
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFG 177
+G+RGL+S++L KF G L +G+L+ V G PT++ L Y I DTKV+G
Sbjct: 182 GLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDTKVYG 241
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 237
++ KPV HSK PIL N F+ + ++G++V + VDDL F TYSS DF GFSV P+KEA
Sbjct: 242 IVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEA 301
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
+K CDEV P+A++I AVN ++RRP+DGKLIGYNTD +I+AIED ++ + +GTA
Sbjct: 302 ALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSGTAV- 360
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 357
SPLAG++FV+ GAGGAG+ALA+GAK +GAR+VI + ++RA+ LA + G A D+
Sbjct: 361 -SPLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLD 419
Query: 358 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 417
N+ PE G ILAN T +GM P D P+S+ L+ Y LVFDAVYTP+ TRLLK+AE +GA
Sbjct: 420 NYHPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGAT 479
Query: 418 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
IV+G+EMF+ QA Q+ +TG APKE R+I+
Sbjct: 480 IVTGLEMFIGQAYRQYEHYTGLPAPKELFRKIM 512
>gi|242085728|ref|XP_002443289.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
gi|241943982|gb|EES17127.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
Length = 541
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/437 (53%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGD+ R EAL LA +LGA+YVD E KVA + + IVS +
Sbjct: 84 RPKWEGGEYEGDDESRFEALLLAMELGAEYVDVEFKVADKFMKLISGKKPDNCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII +
Sbjct: 144 NYENTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVM 203
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I K
Sbjct: 204 NDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINVYNIRQIGPDTKVFGIIGK 263
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V N +YVP VDDL KF +TYSSPDFAGFS P+KEA ++
Sbjct: 264 PVGHSKSPILHNEAFRSVGSNAVYVPFLVDDLAKFLNTYSSPDFAGFSCTIPHKEAAVRC 323
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED I+ T S SPL
Sbjct: 324 CDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIRA---SEQTDSDTSPL 379
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + G A D+ N+ P
Sbjct: 380 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLADLENYHP 439
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 440 EEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 499
Query: 422 VEMFLRQAIGQFNLFTG 438
+EMF+RQA+GQF FTG
Sbjct: 500 LEMFIRQAMGQFEHFTG 516
>gi|357151512|ref|XP_003575813.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 549
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/437 (52%), Positives = 304/437 (69%), Gaps = 9/437 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GD+ R EAL LA +LGA+YVD ELKVA + + IVS +
Sbjct: 84 RPKWEGGEYDGDDEPRFEALQLAMELGAEYVDIELKVADKFMKFMSGKKPEKCKLIVSSH 143
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS E+LG L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII +
Sbjct: 144 NYDNTPSAEELGSLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGLVM 203
Query: 124 GERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
+RG +S++L PKF G L +GSL KG PT L Y + I DT+VFG+I K
Sbjct: 204 NDRGFISRVLCPKFGGYLTFGSLAKGKESAPAQPTAADLINVYNIRQIGPDTRVFGIIGK 263
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PVGHSK PILHN FR V + +YVP VDDL +F +TYSSPDFAGFS P+KEA ++
Sbjct: 264 PVGHSKSPILHNEAFRSVGMDAVYVPFLVDDLARFLTTYSSPDFAGFSCTIPHKEAAVRC 323
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CDEV P+A+ I AVNTI+RR SDGKL+GYNTD +I+AIED I+ T S SPL
Sbjct: 324 CDEVDPIARDIGAVNTIVRR-SDGKLVGYNTDYVGAISAIEDGIRA---SQSTHSTASPL 379
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A ++ N+ P
Sbjct: 380 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLSELENYHP 439
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+G +LAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG
Sbjct: 440 EEGMVLANTTAIGMHPNVNDTPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSG 499
Query: 422 VEMFLRQAIGQFNLFTG 438
+EMF+RQA+GQF FTG
Sbjct: 500 LEMFIRQAMGQFEHFTG 516
>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 538
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/446 (53%), Positives = 304/446 (68%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y GDE RL+AL LA +LGADY+D ELKVA + + IVS +
Sbjct: 92 RPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPGKCKLIVSSH 151
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+LG LV+R+QA GADI+K+ + DI+++ARIFQ+ H QVPII +GER
Sbjct: 152 NYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQVPIIGLVMGER 211
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L+ V G PT++ L Y I DTKVFG+I KPVG
Sbjct: 212 GLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTKVFGIIGKPVG 271
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L N F+ V NG+YV + VDD+ +F TYSS DFAGFS P+KE K CDE
Sbjct: 272 HSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIPHKEDAAKCCDE 331
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
VHP+A++I AVN IIRR +DGKL GYNTD +I+AIE+ + R +N + + GSPLAG+
Sbjct: 332 VHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGL--RASQNVSNTVGSPLAGK 389
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + +ERAK LA + G A D+ NF PE G
Sbjct: 390 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLADLENFHPEDG 449
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D PVS+ LR Y LVFDAVYTP+ TRLL++AE +GA IV+G+EM
Sbjct: 450 MILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEESGAKIVTGLEM 509
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA QF FT APKE ++I+
Sbjct: 510 FIGQAYEQFERFTELPAPKELFQKIM 535
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
gi|297330413|gb|EFH60832.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
Length = 603
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/446 (52%), Positives = 303/446 (67%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADYVD EL+VAS+ + R IVS +
Sbjct: 155 RPKWEGGQYEGDENERQDVLRLAMELGADYVDVELQVASDFIKSIDGKKPESFRVIVSSH 214
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q P I +GER
Sbjct: 215 NYQNTPSVEDLNDLVARIQQTGADIVKIATTAVDIADVARMFHITSSAQGPTIGLVMGER 274
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 275 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 334
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++ G+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 335 HSKSPIVHNQAFKSVDFKGVYVHLLVDNLASFLQAYSSSDFAGFSCTIPHKEAALQCCDE 394
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLAG+
Sbjct: 395 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRRSGDPSSGPSSSSPLAGK 454
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ NF PE G
Sbjct: 455 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGRALSLTDLDNFHPEDG 514
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN D P+S+ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 515 MVLANTTSMGMQPNVDETPISKHALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 574
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 575 FVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|449448440|ref|XP_004141974.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/446 (50%), Positives = 299/446 (67%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + + IVS +
Sbjct: 83 RPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFKVIVSNH 142
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII + +R
Sbjct: 143 NYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIGLVMKDR 202
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+I PVG
Sbjct: 203 GFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGIIGNPVG 262
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV K+CDE
Sbjct: 263 DSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDE 322
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V +A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + + S LAG+
Sbjct: 323 VDSVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVSSRLAGK 380
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGG G+A+A+GAK +GAR+VI + F+RA+ LA V G + D+ NF PE G
Sbjct: 381 LVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLADLENFHPEDG 440
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
IL NATP+GM P D P+ + L+ Y LVFDAVYTPR TRLL++AE +GA IV G+EM
Sbjct: 441 MILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEESGAAIVPGLEM 500
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F RQA Q+ FTG APKE +R+ +
Sbjct: 501 FTRQAYEQYEGFTGLPAPKERIRKFL 526
>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 539
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 306/446 (68%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GDE++RL+AL LA +LGADY+D ELKVA + + + IVS +
Sbjct: 93 RPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKPAKCKVIVSSH 152
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDLG LV+ +QA GADI+K+ + DIT++ARIFQ+ H QVPII +GER
Sbjct: 153 NYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQVPIIGIVMGER 212
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L+ V G P ++ L Y I DTKV+G+I KPVG
Sbjct: 213 GLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDTKVYGIIGKPVG 272
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L+N F+ V +NG+YV + VDD+ F T+SS DFAGFS P+KEA + CD
Sbjct: 273 HSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIPHKEAAVDCCDG 332
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ +A++I AVN IIRR DGKL GYNTD + +ITAIE+ + R +N + + SPLAG+
Sbjct: 333 IDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGL--RVSQNISGAADSPLAGK 390
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GA+VVI + +ERAK LA V G A D+ NF+PE G
Sbjct: 391 LFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIALADLGNFRPESG 450
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM P + P+ + LR+Y LVFDAVYTP+ TRLL++AE +GA VSG+EM
Sbjct: 451 MVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAEESGAATVSGLEM 510
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA QF FTG APKE R+I+
Sbjct: 511 FIGQAYEQFENFTGLPAPKELFRKIM 536
>gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
Length = 657
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/445 (51%), Positives = 305/445 (68%), Gaps = 7/445 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S + IVS +
Sbjct: 147 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 206
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I +GE+
Sbjct: 207 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEK 266
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+ PV
Sbjct: 267 GLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIANPVK 326
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++ C E
Sbjct: 327 QSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHE 386
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN + PLAGR
Sbjct: 387 HDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAVT---PLAGR 442
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 443 LLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 502
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 503 MILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 562
Query: 425 FLRQAIGQFNLFT-GKEAPKEFMRE 448
FLRQA+GQF FT G EAP+ MRE
Sbjct: 563 FLRQALGQFERFTNGIEAPESLMRE 587
>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 303/446 (67%), Gaps = 5/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + + IVS +
Sbjct: 94 RPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCKVIVSSH 153
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I +GER
Sbjct: 154 NYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIGLVMGER 213
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+I KPVG
Sbjct: 214 GLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGIIGKPVG 273
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA KFCDE
Sbjct: 274 HSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAAAKFCDE 333
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A++I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ GSPL GR
Sbjct: 334 VDPVAKSIGAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSGSPLFGR 390
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GA+V+I + +ERAK LA + G A D+ NF PE
Sbjct: 391 LFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNNFHPEDN 450
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P + P++++ LR Y LVFDAVYTP TRLLKDAEA+GA IV+G+EM
Sbjct: 451 MILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKIVTGLEM 510
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA Q+ FTG APKE R+I+
Sbjct: 511 FVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|54290767|dbj|BAD61388.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
gi|125570444|gb|EAZ11959.1| hypothetical protein OsJ_01832 [Oryza sativa Japonica Group]
Length = 509
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/446 (51%), Positives = 307/446 (68%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS +
Sbjct: 63 RPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE+
Sbjct: 123 NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGEK 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 183 GLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C E
Sbjct: 243 QSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCHE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAGR
Sbjct: 303 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 359 LVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 419 MILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEM 478
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 479 FVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|449461453|ref|XP_004148456.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 302/446 (67%), Gaps = 5/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + + IVS +
Sbjct: 94 RPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCKVIVSSH 153
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I +GER
Sbjct: 154 NYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIGLVMGER 213
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+I KPVG
Sbjct: 214 GLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGIIGKPVG 273
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA KFCDE
Sbjct: 274 HSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAAAKFCDE 333
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A+ I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ GSPL GR
Sbjct: 334 VDPVAKVIXAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSGSPLFGR 390
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GA+V+I + +ERAK LA + G A D+ NF PE
Sbjct: 391 LFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNNFHPEDN 450
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P + P++++ LR Y LVFDAVYTP TRLLKDAEA+GA IV+G+EM
Sbjct: 451 MILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKIVTGLEM 510
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA Q+ FTG APKE R+I+
Sbjct: 511 FVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|397911046|gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 490
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/443 (51%), Positives = 303/443 (68%), Gaps = 15/443 (3%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GGLYEGDE+KRL+AL +A +LG DY+D EL+VA + ++ + IVS +
Sbjct: 61 RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS ED+G LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVPII +GER
Sbjct: 121 NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LL PKF G L +G+++ + G PT++ L Y I DTKVFG+I KPV
Sbjct: 181 GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK P+L+N F+ + YNG+YV VDD+ KF TY SPDFAGFS P+KEA +++ DE
Sbjct: 241 QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTYPSPDFAGFSCTMPHKEAALEYLDE 300
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P+A+ I AVN I+RR SDGKL GYNTD +I+AIED ++ S LAG+
Sbjct: 301 IDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGLR------------SLLAGK 347
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALAFGAK +GARVVI + F+RA LA V G A ++ NF PE G
Sbjct: 348 LFVVIGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPEDG 407
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM P D P+ ++ L +Y LVFDAVYTP+ TRLL++AE GA +VSG+EM
Sbjct: 408 MVLANTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEM 467
Query: 425 FLRQAIGQFNLFTGKEAPKEFMR 447
F+RQA Q+ FTG APKE R
Sbjct: 468 FIRQAYEQYERFTGLPAPKELFR 490
>gi|125525997|gb|EAY74111.1| hypothetical protein OsI_01996 [Oryza sativa Indica Group]
Length = 455
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 304/445 (68%), Gaps = 7/445 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S + IVS +
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I +GE+
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEK 123
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+ PV
Sbjct: 124 GLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELLDIYNIRRIGPDTKVLGVIANPVK 183
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++ C +
Sbjct: 184 QSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHK 243
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A++TIIRRP DGKL+GYN D +I+AIED I G KN + PLAGR
Sbjct: 244 HDPVAKSIGAISTIIRRP-DGKLVGYNNDYIGAISAIEDGIGGPGSKNAAVT---PLAGR 299
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 300 LLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 359
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 360 MILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 419
Query: 425 FLRQAIGQFNLFT-GKEAPKEFMRE 448
FLRQA+G FT G EAP+ MRE
Sbjct: 420 FLRQALGPLERFTNGIEAPESLMRE 444
>gi|115436640|ref|NP_001043078.1| Os01g0375200 [Oryza sativa Japonica Group]
gi|113532609|dbj|BAF04992.1| Os01g0375200, partial [Oryza sativa Japonica Group]
Length = 572
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/446 (51%), Positives = 307/446 (68%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS +
Sbjct: 126 RPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSSH 185
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE+
Sbjct: 186 NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGEK 245
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 246 GLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPVK 305
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C E
Sbjct: 306 QSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCHE 365
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAGR
Sbjct: 366 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAGR 421
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 422 LVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 481
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 482 MILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEM 541
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 542 FVRQAMGQFEHFTGGIEAPESLMREI 567
>gi|58041010|gb|AAW63134.1| dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 510
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/446 (52%), Positives = 304/446 (68%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 62 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 121
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 122 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 181
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 182 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 241
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 242 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDE 301
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA +
Sbjct: 302 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASK 361
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 362 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 421
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 422 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 481
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 482 FVRQAYEQFEIFTGLPAPKELYWQIM 507
>gi|109157947|pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate
Dehydratase- Shikimate Dehydrogenase In Complex With
Tartrate And Shikimate
Length = 523
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/446 (52%), Positives = 304/446 (68%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 66 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 125
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 126 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 185
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 186 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 245
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 246 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDE 305
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA +
Sbjct: 306 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASK 365
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 425
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 485
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 486 FVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
gi|75207269|sp|Q9SQT8.1|DHQSD_ARATH RecName: Full=Bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic; Short=DHQ-SDH protein;
AltName: Full=DHQase-SORase; AltName: Full=Protein
EMBRYO DEFECTIVE 3004; Includes: RecName:
Full=Dehydroquinate dehydratase; Short=DHQ; Includes:
RecName: Full=Shikimate dehydrogenase; Short=SDH; Flags:
Precursor
gi|6437552|gb|AAF08579.1|AC011623_12 putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
gi|332640860|gb|AEE74381.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/446 (52%), Positives = 304/446 (68%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 155 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 214
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 215 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 274
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 275 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 334
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 335 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDE 394
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA +
Sbjct: 395 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASK 454
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 455 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 514
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 515 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 574
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 575 FVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|218188248|gb|EEC70675.1| hypothetical protein OsI_01994 [Oryza sativa Indica Group]
Length = 509
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/446 (51%), Positives = 306/446 (68%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS +
Sbjct: 63 RPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I + E+
Sbjct: 123 NYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMSEK 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 183 GLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C E
Sbjct: 243 QSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCHE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAGR
Sbjct: 303 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 359 LVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 419 MILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVEM 478
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 479 FVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Fagus sylvatica]
Length = 536
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 309/458 (67%), Gaps = 19/458 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y + IVS +
Sbjct: 88 RPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVAQEFNESIYGKKPEMFKVIVSSH 147
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV---PIIAYSV 123
TPS EDLG LV+R+QATGADI+K + +IT++ARIFQ++ H QV PIIA +
Sbjct: 148 NYQNTPSVEDLGNLVARIQATGADIVKFATTALEITDVARIFQIIVHSQVSSVPIIAIVM 207
Query: 124 GERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISK 181
GERG +S++L PKF G L +G+++ V G P ++ L Y I DTKVFG+I K
Sbjct: 208 GERGFISRILCPKFGGFLSFGTIESGIVSAPGQPIMKDLLHLYNFRQIGPDTKVFGIIGK 267
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD-----FAGFSVGFPYKE 236
PVGHSK PIL+N F+ V +NG+YV L + + SPD FAGFS+ P+KE
Sbjct: 268 PVGHSKSPILYNEAFKSVGFNGVYV------LSWWMTCKISPDLLILRFAGFSITIPHKE 321
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
A +K CDEV P+A++I AVN I+RR +DGK+ GYNTD +I+AIED + RG KN + +
Sbjct: 322 AALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFGYNTDYVGAISAIEDGL--RGSKNISYA 379
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 356
SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + +ERAK +A V G A D+
Sbjct: 380 ADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKEIADTVGGQALSLADL 439
Query: 357 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 416
NF PE G ILAN T +GM P D P+ + LR Y +VFDAVYTP+ TRLL+++E +GA
Sbjct: 440 ENFHPEDGMILANTTSIGMQPKVDETPIPKHALRSYSVVFDAVYTPKITRLLRESEESGA 499
Query: 417 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
IIV+GVEMF+ QA QF FTG APKE ++I +AK+
Sbjct: 500 IIVTGVEMFIGQAFEQFERFTGLPAPKELFKKI-MAKY 536
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 303/446 (67%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 155 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 214
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 215 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 274
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 275 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 334
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 335 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDE 394
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA +
Sbjct: 395 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASK 454
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 455 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 514
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TR L++AE +GAI VSG EM
Sbjct: 515 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRQLREAEESGAITVSGSEM 574
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 575 FVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
Length = 526
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/446 (51%), Positives = 304/446 (68%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y GDE RL+AL LA +LGADY+D ELK + + + + IVS +
Sbjct: 83 RPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDEFNNALHGNKSAKCKLIVSSH 142
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDLG LV+R+QA+GADI+K + DIT++AR+FQ+ H QVPIIA +GE+
Sbjct: 143 NYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVARVFQITVHSQVPIIAMVMGEK 202
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L PKF G L +G+L+ V G PTVE L Y + DTK+FG+I KPV
Sbjct: 203 GLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGIIGKPVS 262
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L+N +FR V +NG+++ + VDD+ FF TYSS DFAGFS P+KEA + C E
Sbjct: 263 HSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAALDCCAE 322
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P A+AI AVN IIRRP DGKL G NTD +I+AIE+ ++ G + + GSPLAG+
Sbjct: 323 IDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAIEEGLQ--GSQPSIS--GSPLAGK 377
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+A+A+GAK +GARVVI + +ERA+ LA V A +++ NF PE
Sbjct: 378 LFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIVVGAEALSLDELSNFHPEND 437
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D P+S+E L+ Y LVFDAVYTP+ TRLL++A+ +GA IV+GVEM
Sbjct: 438 MILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKITRLLREAQESGAKIVTGVEM 497
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA Q+ FTG APKE + I+
Sbjct: 498 FIGQAYEQYERFTGLPAPKELFKNIM 523
>gi|224128596|ref|XP_002320371.1| predicted protein [Populus trichocarpa]
gi|222861144|gb|EEE98686.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/343 (65%), Positives = 277/343 (80%), Gaps = 9/343 (2%)
Query: 115 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK 174
Q+P+IA +VG RGL+SQLL PKF G LVYGSL V G+PT+ SLRQ YK+E+INADTK
Sbjct: 1 QIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTK 60
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 234
VFGLIS PVGHSKGP+LHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+
Sbjct: 61 VFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPH 120
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
KEA + CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDC+ASI+AIEDA+ GT
Sbjct: 121 KEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL------TGT 174
Query: 295 ASF---GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
SPL+G+ FVL GAGGAGRALAFGAKSRGARV+IF+ ++ERA++LA V G A
Sbjct: 175 KLIILVPSPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEAL 234
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
P+E + F+P G ILANA+ +GM PN+D+ PVS+ETL+ +LVFDAVYTPR TRLL++A
Sbjct: 235 PYESLDRFRPVNGMILANASAIGMEPNSDQSPVSKETLKACELVFDAVYTPRNTRLLQEA 294
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ A++VSGVEMF+RQA+GQF LFTG AP+ FMR++VL +F
Sbjct: 295 KEVVAVVVSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 337
>gi|242053027|ref|XP_002455659.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
gi|241927634|gb|EES00779.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
Length = 509
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/446 (51%), Positives = 303/446 (67%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS +
Sbjct: 63 RPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFISGHKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++ LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + ER
Sbjct: 123 NYEYTPSCEEITNLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSER 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTKV GLI+ PV
Sbjct: 183 GLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLNIYNIKCIGPDTKVLGLIANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CDE
Sbjct: 243 QSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCDE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ +S PLAGR
Sbjct: 303 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAASS---PLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVVI + +E+A SLA+ + G A ED+ F+PE+G
Sbjct: 359 LVVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVSLANAIGGQALRLEDLETFRPEEG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 419 MILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 478
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 479 FIRQAMGQFERFTGGIEAPECLMREI 504
>gi|350537731|ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169883|gb|AAC17991.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169888|gb|AAC17993.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
Length = 545
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/445 (51%), Positives = 303/445 (68%), Gaps = 7/445 (1%)
Query: 8 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 67
P W GG Y GDE RL+AL LA +LGADY+D ELK + + + + IVS +
Sbjct: 103 PTWEGGQYAGDEKSRLDALRLAMELGADYIDVELKAIGEFNNALHGNKSAKCKLIVSSHN 162
Query: 68 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERG 127
TPS EDLG LV+R+QA+GADI+K + DIT++AR+FQ+ H QVPIIA +GE+G
Sbjct: 163 YESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVARVFQITVHSQVPIIAMVMGEKG 222
Query: 128 LVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGH 185
L+S++L PKF G L +G+L+ V G PTVE L Y + DTK+FG+I KPV H
Sbjct: 223 LMSRILCPKFGGYLTFGTLEVGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGIIGKPVSH 282
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 245
SK P+L+N +FR V +NG+++ + VDD+ FF TYSS DFAGFS P+KEA + C E+
Sbjct: 283 SKSPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAALDCCAEI 342
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
P A+AI AVN IIRRP DGKL G NTD +I+AIE+ ++ G + + GSPLAG++
Sbjct: 343 DPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAIEEGLQ--GSQPSIS--GSPLAGKL 397
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
FV+ GAGGAG+A+A+GAK +GARVVI + +ERA+ LA V A +++ NF PE
Sbjct: 398 FVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIVVGAEALSLDELSNFHPENDM 457
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
ILAN T +GM P D P+S+E L+ Y LVFDAVYTP+ TRLL++A+ +GA IV+GVEMF
Sbjct: 458 ILANTTSIGMQPKVDDTPISKEALKHYSLVFDAVYTPKITRLLREAQESGAKIVTGVEMF 517
Query: 426 LRQAIGQFNLFTGKEAPKEFMREIV 450
+ QA Q+ FTG APKE + I+
Sbjct: 518 IGQAYEQYERFTGLPAPKELFKNIM 542
>gi|194694678|gb|ACF81423.1| unknown [Zea mays]
Length = 428
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/428 (53%), Positives = 293/428 (68%), Gaps = 7/428 (1%)
Query: 31 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 90
+LGA+YVD ELKVA + + IVS + TPS E+L LV+++QATGAD
Sbjct: 2 ELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSHNYETTPSSEELANLVAQIQATGAD 61
Query: 91 IIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSLK 147
I+K+ + +I ++A++FQ+L HCQ VPII + +RG +S++L PK+ G L +GSLK
Sbjct: 62 IVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKYGGFLTFGSLK 121
Query: 148 G--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY 205
PT L Y + I DTKVFG+I KPVGHSK PILHN FR V +N +Y
Sbjct: 122 KGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGFNAVY 181
Query: 206 VPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 265
VP VDDL KF TYSSPDFAGFS P+KEA ++ CDEV P+A+ I AVNTI+RRP DG
Sbjct: 182 VPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDEVDPVARDIGAVNTIVRRP-DG 240
Query: 266 KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 325
KL+GYNTD +I+AIED IK T SPLAGR+FV+ GAGGAG+ALA+GAK +
Sbjct: 241 KLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPLAGRLFVVIGAGGAGKALAYGAKEK 299
Query: 326 GARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 385
GARVVI + F RA+ LA+ + G A D+ N+ PE+G ILAN T +GMHPN + P+S
Sbjct: 300 GARVVIANRTFARAQELANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNETPLS 359
Query: 386 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 445
++ LR Y +VFDAVYTP++TRLL++A GA +VSG+EMF+RQA+GQF FTG AP
Sbjct: 360 KQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPAPDSL 419
Query: 446 MREIVLAK 453
MR+IVL K
Sbjct: 420 MRDIVLTK 427
>gi|160877702|pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H)
gi|160877703|pdb|2O7S|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-dehydroshikimate-sdh- Shikimate-nadp(h)
Length = 523
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 303/446 (67%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 66 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 125
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 126 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 185
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 186 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 245
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 246 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQXCDE 305
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTD SI+AIED ++ G + S SPLA +
Sbjct: 306 VDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSSSPLASK 365
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 425
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 485
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 486 FVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|226499578|ref|NP_001152357.1| LOC100285997 [Zea mays]
gi|195655441|gb|ACG47188.1| shikimate biosynthesis protein aroDE [Zea mays]
gi|414877457|tpg|DAA54588.1| TPA: shikimate biosynthesis protein aroDE [Zea mays]
Length = 509
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 300/446 (67%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS +
Sbjct: 63 RPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E+
Sbjct: 123 NYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSEK 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 183 GLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CDE
Sbjct: 243 QSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCDE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAGR
Sbjct: 303 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVIS---PLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVVI + +E+A LA+ + G A ED+ F+PE+G
Sbjct: 359 LIVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVRLANAIGGQALRLEDLETFRPEEG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 419 MILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 478
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 479 FIRQAMGQFEHFTGGIEAPESLMREI 504
>gi|357132175|ref|XP_003567707.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 509
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/446 (50%), Positives = 297/446 (66%), Gaps = 7/446 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GD+ R E L LA +LGA YVD ELKVA + + IVS +
Sbjct: 63 RPNWEGGRYDGDDATRFETLRLAMELGAVYVDIELKVADKFINFLSGYKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + ER
Sbjct: 123 NYESTPSCEELANLVARIQAVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLVMSER 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G L T G PTVE L Y + I DTKV GL++ PV
Sbjct: 183 GLMSRVLSPKFGGYLTFGILDTTKTSASGQPTVEELLDIYNIRSIGPDTKVLGLVANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + V Y+ +Y+P+ DDL +F TYSSPDF+GFS P+K + C E
Sbjct: 243 QSKSPILHNKCLQSVGYDAVYLPLLADDLARFLDTYSSPDFSGFSCSLPFKVDAVHCCHE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+A++I A+NTIIR+P DGKL+GYNTD +I+AIED I G K+ S PLAGR
Sbjct: 303 HDTVAKSIGAINTIIRKP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAVS---PLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A LA+ V G A D+ NF+PE G
Sbjct: 359 LIVVVGAGGAGKAIAYGAKKKGARVVVANRTYEKAVGLANAVGGQALRLADLENFRPEGG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 419 MILANATSLGMYPNVDGTPIPKKALSSYDVVFDAVYAPKVTRLLREAEEQGIKVVSGVEM 478
Query: 425 FLRQAIGQFNLFTGK-EAPKEFMREI 449
F+RQA+GQF FTG EAP+ MREI
Sbjct: 479 FVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|259479224|dbj|BAI40147.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Diospyros
kaki]
Length = 508
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 295/446 (66%), Gaps = 4/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE +R LH A +LGADY+D ELKVA + IVS +
Sbjct: 61 RPTWEGGQYDGDESRRQATLHQAMELGADYIDIELKVADEFFSSIQERSPKRPKVIVSSH 120
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++G + +R+QATGADI+K+ + DIT+ ARI QL++H QVP I ++GER
Sbjct: 121 NYENTPSAEEIGNIAARIQATGADIVKIATTALDITDSARILQLIAHSQVPTIGLAMGER 180
Query: 127 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L+ G PT+ L Y I DTKV G+I P+G
Sbjct: 181 GLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIEPDTKVHGVIGNPIG 240
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+K A ++ CDE
Sbjct: 241 HSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPHKMAGLECCDE 300
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + + SPLAGR
Sbjct: 301 VDPIAKAIGAISCMIKKPSDGKLIGYNVDYLGAIAAIEEGLGGSSSASNGSV--SPLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGA +ALA+G K +GARVV+ + +E+AK LA + G + P ++ +F PE G
Sbjct: 359 LFVVIGAGGAAKALAYGGKEKGARVVVANRTYEKAKDLARKIGGESMPLTELNDFHPEDG 418
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILANAT +GM PNTD P+S+E L Y LVFDA+YTP+ TRLL++A+ GA +V G EM
Sbjct: 419 MILANATSVGMKPNTDATPISKEALSRYSLVFDAIYTPKWTRLLREAKETGAKVVFGTEM 478
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
FL QA QF FTG APK+ +RE +
Sbjct: 479 FLNQAFVQFEKFTGLPAPKDLIRETL 504
>gi|224125422|ref|XP_002319582.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857958|gb|EEE95505.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 521
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/447 (49%), Positives = 306/447 (68%), Gaps = 7/447 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC- 65
RPKW GG Y+GDE+KR +AL +A +LGAD++D ELKVA + IVS
Sbjct: 75 RPKWEGGQYDGDENKRQKALQIAMELGADFIDIELKVAQEFYNFIQGKKPEKVKIIVSSH 134
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 125
N +C TPS E++G LV+R+QATGADI+K+ + DIT+ AR+F ++ + QVP+I +GE
Sbjct: 135 NYEC-TPSIEEIGDLVARIQATGADIVKVATTALDITDNARMFHIIVNLQVPMIGLVMGE 193
Query: 126 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 183
RGL+S++L+ K+ L +GS++ V G PTV+ L + Y + I ADTKV G+I P+
Sbjct: 194 RGLMSRVLAAKYGAFLTFGSIEAGVVSAPGQPTVKDLLELYNLRQIEADTKVHGVIGNPI 253
Query: 184 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
GHSK P L+N F+ V +NGIY+P+ VD + + STYSSPDFAG+S P+KE +K CD
Sbjct: 254 GHSKSPHLYNAAFKSVGFNGIYLPLLVDSVANYISTYSSPDFAGYSYTIPHKEDGLKCCD 313
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
EV P+A+ I A++ +IRRP DGKL GYN D +I AIE+A+ G NG + SPLAG
Sbjct: 314 EVDPIAKEIGAISCMIRRPDDGKLKGYNVDYLGAIAAIEEAL---GASNGAPASVSPLAG 370
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 363
++FV+ GAGGAG+ALA+GA +GARVV+ + + +AK LAS V G A + +F PE+
Sbjct: 371 KLFVVMGAGGAGKALAYGAYEKGARVVVANRTYGKAKELASKVGGQAIALAKLKDFHPEE 430
Query: 364 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 423
G ILAN T +GM P + P+++E L+ Y LVFDA+YTP+ T LL++A+ AG+ IV G E
Sbjct: 431 GMILANTTSVGMKPRIEDTPLAKEALKHYALVFDAIYTPKLTTLLREAQEAGSTIVYGTE 490
Query: 424 MFLRQAIGQFNLFTGKEAPKEFMREIV 450
MF+ QA QF FTG APK+ +R+++
Sbjct: 491 MFINQAFVQFERFTGLPAPKQLIRDVL 517
>gi|46371086|gb|AAS90325.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 1
[Nicotiana tabacum]
Length = 569
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/444 (49%), Positives = 298/444 (67%), Gaps = 7/444 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y GDE RL+AL +A +LGADY+D ELK + + + + IVS +
Sbjct: 83 RPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCKVIVSSH 142
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA +GE+
Sbjct: 143 NYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIAMVMGEK 202
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+I KPV
Sbjct: 203 GLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGIIGKPVS 262
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA++ CDE
Sbjct: 263 HSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAIVDCCDE 322
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ + + GSPLAG+
Sbjct: 323 LNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ----GSQPSMSGSPLAGK 377
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + +ERA+ LA V G A +++ NF PE
Sbjct: 378 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQALSLDELSNFHPEND 437
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D P+ +E LR Y LVFDAVYTP+ TRLL++A +G IV+GVEM
Sbjct: 438 MILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLREAHESGVKIVTGVEM 497
Query: 425 FLRQAIGQFNLFTGKEAPKEFMRE 448
F+ QA Q+ FTG + K +E
Sbjct: 498 FIGQAYEQYERFTGLASSKGTFQE 521
>gi|535771|gb|AAA34069.1| dehydroquinate dehydratase/shikimate dehydrogenase, partial
[Nicotiana tabacum]
Length = 579
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/444 (49%), Positives = 298/444 (67%), Gaps = 7/444 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y GDE RL+AL +A +LGADY+D ELK + + + + IVS +
Sbjct: 93 RPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCKVIVSSH 152
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA +GE+
Sbjct: 153 NYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIAMVMGEK 212
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+I KPV
Sbjct: 213 GLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGIIGKPVS 272
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA++ CDE
Sbjct: 273 HSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAIVDCCDE 332
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ + + GSPLAG+
Sbjct: 333 LNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ----GSQPSMSGSPLAGK 387
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+GAK +GARVVI + +ERA+ LA V G A +++ NF PE
Sbjct: 388 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQALSLDELSNFHPEND 447
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D P+ +E LR Y LVFDAVYTP+ TRLL++A +G IV+GVEM
Sbjct: 448 MILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLREAHESGVKIVTGVEM 507
Query: 425 FLRQAIGQFNLFTGKEAPKEFMRE 448
F+ QA Q+ FTG + K +E
Sbjct: 508 FIGQAYEQYERFTGLASSKGTFQE 531
>gi|357475825|ref|XP_003608198.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355509253|gb|AES90395.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 506
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 298/438 (68%), Gaps = 27/438 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFI 62
RPKW GG+Y+GDE++RL+AL LA +L ADY+D ELKVA +I GK Y+ T+ I
Sbjct: 66 RPKWEGGMYDGDENQRLDALQLAMELEADYIDVELKVAHQFYDSIRGKTYNK----TKVI 121
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 122
VS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVP I
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPFIGLV 181
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 180
+G+RGL+S++L KF G L +G+L+ V G PT++ L Y I +TKVFG++
Sbjct: 182 MGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPNTKVFGIVG 241
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
KP + ++G++V + VDDL F TYSS DF GFSV P+KEA +K
Sbjct: 242 KPT---------------IGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEAALK 286
Query: 241 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 300
CDEV P+A++I VN ++RRP+DGKLIGYNTD +I+AIED + RG N + + SP
Sbjct: 287 CCDEVDPVAKSIGVVNCVVRRPTDGKLIGYNTDYVGAISAIEDGL--RGKHNDSGTAVSP 344
Query: 301 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 360
L G++FV+ GAGGAG+ALA+GAK +GAR+VI + ++RA+ LA + G A D+ N+
Sbjct: 345 LVGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDNYH 404
Query: 361 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 420
PE G ILAN T +GM P D P+S+ L+ Y LVFDAVYTP+ TRLLK+AE +GA IV+
Sbjct: 405 PEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATIVT 464
Query: 421 GVEMFLRQAIGQFNLFTG 438
G+EMF+ QA Q+ +TG
Sbjct: 465 GLEMFIGQAYRQYEHYTG 482
>gi|356574916|ref|XP_003555589.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 630
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 298/446 (66%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE +R +AL LA +LG+++VD ELKVA + IVS +
Sbjct: 181 RPIWEGGEYDGDESQRQDALRLAIELGSEFVDVELKVADEFYKSIGGKKAESVKIIVSSH 240
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++G L +R+QATGAD++K+ + DIT+ AR+FQ+L H QVP+I ++GE+
Sbjct: 241 NLESTPSVEEIGNLAARIQATGADVVKIATTALDITDCARLFQVLVHSQVPMIGIAMGEK 300
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S++L KF G L +GS++ + G T++ L Y I TKV G+I P+G
Sbjct: 301 GFISRVLCAKFGGFLTFGSIEAGAISAPGQTTIKELLDLYNFRQIGVGTKVHGVIGNPIG 360
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+NP F+ V ++GIY+P+ +D++ F +TYSSPDF G+S P+K+ ++ CDE
Sbjct: 361 HSKSPHLYNPAFKSVGFDGIYLPLLIDNVSDFLNTYSSPDFVGYSYTIPHKQNGLRCCDE 420
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A+AI A++ +I+RP+DG+LIGYN D +I AIE+ + + + S SPL G+
Sbjct: 421 VDPIAKAIGAISCMIKRPNDGRLIGYNFDYLGAIAAIEERLHLQDSNGRSISGCSPLYGK 480
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
+FV+ GAGGAG+ALA+G K +GARVV+ + + +AK LA+ V G A ++ +F PE+G
Sbjct: 481 LFVVMGAGGAGKALAYGGKEKGARVVVANRTYAKAKELATKVGGEAITLSELESFHPEQG 540
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
ILAN T +GM P D P+ +E L+ Y LVFDA+YTP+ TRLL++A+ GA IV G EM
Sbjct: 541 MILANTTSVGMKPKIDLTPIPKEALKHYSLVFDAIYTPKLTRLLREAQETGAAIVYGTEM 600
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+ QA QF +FT APK+ MR+++
Sbjct: 601 FINQAFMQFEMFTKLPAPKQHMRDVL 626
>gi|226494502|ref|NP_001140289.1| uncharacterized protein LOC100272333 [Zea mays]
gi|194698862|gb|ACF83515.1| unknown [Zea mays]
gi|414878214|tpg|DAA55345.1| TPA: hypothetical protein ZEAMMB73_777854 [Zea mays]
Length = 532
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/453 (47%), Positives = 293/453 (64%), Gaps = 10/453 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y G++ R EAL LA +LGA+YVD E KVA + + I+S
Sbjct: 82 RPNWEGGQYAGEDEPRFEALLLAMELGAEYVDVEFKVADKFMKYLSGKKPQNCKLIISAY 141
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYSV 123
TPS +L LV++++ATGADI+K+ + DI + +R+FQ+L+HC QVPII
Sbjct: 142 DYKTTPSVHELLNLVAQIRATGADIVKIETTAADIVDTSRMFQVLAHCHEKQVPIIGLVR 201
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
E G +S+++ K+ G L + SL+ PTV L YK+ I DTKVFG+I
Sbjct: 202 KEHGFISRIICAKYGGYLTFASLENGKESTTEQPTVADLINKYKIRQIGPDTKVFGIIGN 261
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PV HSK PI+ N FR V ++ +++P DDL +F T+S+PD+AGFS P+KE ++
Sbjct: 262 PVSHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVQFLYTFSAPDYAGFSCTMPHKETALRC 321
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
CD+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+AIED I+ T S SPL
Sbjct: 322 CDDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIEDGIRA---SQPTDSITSPL 377
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
AGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA + G A ++ ++ P
Sbjct: 378 AGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELAHIIGGTALTLSELESYHP 437
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
EKG ILANAT +GMHPN D P+S+ L+ Y +VFDAV+ PR+TRLL++A GA ++ G
Sbjct: 438 EKGMILANATSVGMHPNVDETPLSKHALKSYAVVFDAVFVPRETRLLREAAVCGATVIDG 497
Query: 422 VEMFLRQAIGQFNLFT-GKEAPKEFMREIVLAK 453
+EM +R + QF LFT G AP+ MRE +L K
Sbjct: 498 LEMLIRLVMVQFKLFTGGMTAPERLMREAILTK 530
>gi|168017409|ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687580|gb|EDQ73962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 519
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/447 (47%), Positives = 295/447 (65%), Gaps = 7/447 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R KW GG Y+G E R + L +A DLGADY+D ELKVA + + S + T I+ N
Sbjct: 68 RAKWEGGEYKGSEESRQDILRMAYDLGADYIDVELKVAGGFIQELRSRGKDSTTKIIVSN 127
Query: 67 LDCE-TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 125
+ + TPS+E++ + +M ATG DI+K V + DIT++A++F LS + P I ++G
Sbjct: 128 HNWDFTPSDEEIHATIEQMWATGGDIVKYVTTAQDITDVAQVFHFLSESKGPTIGLAMGP 187
Query: 126 RGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 183
G++S+LL+PKF G L +G+L KG G PTV+ L + Y+V+ ++ DT V+G+I KPV
Sbjct: 188 AGMISRLLAPKFGGYLTFGALCKGQESAPGQPTVQDLIEVYRVKSMDRDTMVYGVIGKPV 247
Query: 184 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
HSKGP+LHN F +N N +YVP+ VDD KF + ++ PDF GFSV PYKE +K CD
Sbjct: 248 YHSKGPVLHNKGFEELNLNKVYVPLLVDDFNKFMNVFNRPDFHGFSVTIPYKEDALKLCD 307
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
V A+ I AVNT++R + G+ GYNTDCE +++AIE ++ G N + PL G
Sbjct: 308 RVENAAKIIGAVNTVVRETT-GEYQGYNTDCEGALSAIEKGLRHSGLANNDET---PLKG 363
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 363
++FV+ GAGGAG+ALA+GAK R ARVV+ + ++ERAK+LA V G A + + +F+PE
Sbjct: 364 KLFVVIGAGGAGKALAYGAKERHARVVVANRNYERAKALAESVGGKAIELDQLSDFRPET 423
Query: 364 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 423
G ILAN+T +GM P R P+ ++ L Y LVFDAVYTP++T+LLKDA GA+ VSG E
Sbjct: 424 GMILANSTSIGMEPEVTRSPIHKDALSAYALVFDAVYTPKQTQLLKDAAEMGAVTVSGEE 483
Query: 424 MFLRQAIGQFNLFTGKEAPKEFMREIV 450
MF QA QF FT AP+ MR+++
Sbjct: 484 MFYGQAFAQFRYFTDLPAPESAMRDVI 510
>gi|255070969|ref|XP_002507566.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
gi|226522841|gb|ACO68824.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
Length = 517
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/465 (41%), Positives = 280/465 (60%), Gaps = 18/465 (3%)
Query: 3 CNVS-RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS--HQSGT 59
C V+ RP W GG Y+GDE RL L A +LGA YVD EL+ A + + +S T
Sbjct: 46 CIVTYRPTWEGGQYKGDEQHRLSVLWTAVELGAAYVDCELRAAGHFFAAAPNGVRERSTT 105
Query: 60 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI- 118
+ I+S + + PSE +L + ++ GADI+K+ V DIT+IAR+ LL+ +
Sbjct: 106 KIILSSHNYDDVPSEVELDEIHAQCVVAGADIVKIAAMVKDITQIARLENLLARAKSATG 165
Query: 119 ---IAYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADT 173
I +GE G VS+LL+ KF L +G+L+ G PT+ LR Y+++ + +T
Sbjct: 166 HKTIVLGMGEAGQVSRLLAAKFGSFLTFGALRSGAESAPGQPTLSQLRDIYRLQKQSTNT 225
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFSVG 231
KV G+I P+ SK P+LHN + + YVP+ V D++KF ST + S F GFSV
Sbjct: 226 KVMGVIGNPISQSKSPVLHNISLEAAGLDACYVPLLVSDIRKFLSTPLFVSDSFTGFSVT 285
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE+ + C+E+ P+A+ I AVNT++R P +GK GYNTD A++ AIE A
Sbjct: 286 IPHKESAVMCCEELDPVAKKIGAVNTLVRLP-NGKFKGYNTDYSAAVRAIERAYTSH-LD 343
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAA 350
+ L G+ V+ GAGGAGR+LAFGA +GA +++I + FERAK+LA+ G A
Sbjct: 344 GDMRDSETILRGKTIVVVGAGGAGRSLAFGAAFKGAGKIIIANRSFERAKALAAACGGEA 403
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNT-DRVPVSEETLR--DYQLVFDAVYTPRKTRL 407
+++ + KG +LAN T LGM+P++ D PV +E L+ +++VFDAVY P +TRL
Sbjct: 404 VALDELRD-GALKGDVLANTTSLGMYPDSVDETPVPKEALQAAGFKVVFDAVYNPLETRL 462
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
L++A+ G SG++MF+ QA QF LFTGK+A + MR+ VLA
Sbjct: 463 LREAKECGCTQASGLDMFVGQAAQQFELFTGKKAAESLMRKAVLA 507
>gi|397911050|gb|AFO68801.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 377
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/327 (53%), Positives = 227/327 (69%), Gaps = 14/327 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG Y+G+E+KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 61 RPKWEGGQYDGEENKRLDALRLAMELGADYIDVELQVAREFNNSISAKKPEKFKVIVSSH 120
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDLG LV+++QATGADI+K+ + DIT++ARIFQ+ H QVPII +GER
Sbjct: 121 NYENTPSVEDLGNLVAKIQATGADIVKIATTALDITDVARIFQITVHSQVPIIGLVMGER 180
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S+LL PKF G L + +L+ V G PT+ L Y I DTKVFG+I KPVG
Sbjct: 181 GLISRLLCPKFGGYLTFATLEAGKVSAPGQPTINDLLNVYNFRLIGPDTKVFGIIGKPVG 240
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L+N F+ + +NG+YV + VDD+ KF TYSS DF GFSV P+KE +K C+E
Sbjct: 241 HSKSPLLYNSAFKSIGFNGVYVHLLVDDIAKFLQTYSSTDFVGFSVTIPHKENAVKCCNE 300
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V P+A++I AVN II+R SDGKL GYNTD +I+AIED ++ SPLAG+
Sbjct: 301 VDPVAKSIEAVNCIIKRQSDGKLFGYNTDYVGAISAIEDGLR------------SPLAGK 348
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVI 331
+FV+ GAGGAG+ALA+GAK++GARVVI
Sbjct: 349 LFVVIGAGGAGKALAYGAKAKGARVVI 375
>gi|145352721|ref|XP_001420686.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580921|gb|ABO98979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 526
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/460 (43%), Positives = 278/460 (60%), Gaps = 19/460 (4%)
Query: 6 SRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS---HQSGTRFI 62
+RP W GG +GDE RLEAL A + GA YVD E A + ++ T+ I
Sbjct: 73 NRPTWEGGQDDGDESARLEALWRAHECGAAYVDCEALAAERFFAAKPATATLRNGKTKII 132
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIA 120
+S + ETP++E L + ++ GADI+K+ N + ++AR+ +LL ++ I
Sbjct: 133 LSSHNYDETPNDEILAEIHAKCVRLGADIVKMASVCNAVEDVARLEKLLRTKGREIETIV 192
Query: 121 YSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHINADTKVF 176
+ E G VS+LL+ KF L +G+++ P G P +E LR Y+V A TKV
Sbjct: 193 LGMSEHGQVSRLLAAKFGSFLTFGAIRRGEESAP--GQPLLEELRDLYRVPTQTAATKVM 250
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFSVGFPY 234
G+I P+GHSK P LHNP + YVP+ V D+K F ++ + S DF GFSV P+
Sbjct: 251 GVIGNPIGHSKSPALHNPCLAAAGVDACYVPLLVKDIKTFLASPLFGSKDFVGFSVTIPH 310
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
KE ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE+A+++ K G
Sbjct: 311 KEDALECCAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYVAAIEAIENAMEK---KTGV 366
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 354
A+ S LAG+ V+ GAGGAG+ALAFGAK +GA VVI + ERA++LA G A E
Sbjct: 367 AAAKS-LAGKTVVVIGAGGAGKALAFGAKFKGANVVIANRSVERAQALADACGGVAVSLE 425
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
D+ + G +LAN+T +GM PN + P L + +VFDAVYTP +TRLL++A+A+
Sbjct: 426 DLASGSV-VGDVLANSTSVGMQPNVEDTPTPASVLGGFSVVFDAVYTPLETRLLREAKAS 484
Query: 415 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
G I SG++MF+ QA QF LFTGKEA E MR+ VL+
Sbjct: 485 GCEIASGLDMFVGQAARQFELFTGKEAEVELMRDAVLSSI 524
>gi|302842835|ref|XP_002952960.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
gi|300261671|gb|EFJ45882.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
Length = 564
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 279/467 (59%), Gaps = 27/467 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-----GTRF 61
RP W GG Y+G E +RL L +A +GA YVD E K + + Q T+
Sbjct: 83 RPVWEGGKYDGPEPERLAVLKMAALMGAPYVDVEFKASPYFFAGETGWSQGRAVPLSTKV 142
Query: 62 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 121
I+S + +TP L L S M+A GADI+KL NDIT+ AR+ LL P+IA
Sbjct: 143 ILSYHDFQQTPEPAVLDRLASAMRAAGADIVKLAAMANDITDAARMLDLLRKKDGPMIAL 202
Query: 122 SVGERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 179
S+GE+G + +LL+ K+ G L + ++ + G P + L + +TKV+G+I
Sbjct: 203 SMGEKGQIVRLLAAKYGGYLTFAAMSPERASAPGQPDIGKLAGLFGYRRQGPETKVYGII 262
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYKEAV 238
PV HSK P++HN F+HV ++G+YVP+ VDDL++F + + DFAGFSV P+KEA
Sbjct: 263 GNPVSHSKSPLIHNTAFQHVGFDGVYVPLLVDDLERFLTAFKDHEDFAGFSVTIPHKEAA 322
Query: 239 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 298
++ EV P+A+ I AVNT++R+P DG G+NTD A+I+AIE + + G A+ G
Sbjct: 323 LRLATEVDPVARQIGAVNTLVRQP-DGSFKGFNTDWLAAISAIEHGVAG---EPGRAAAG 378
Query: 299 -----------SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
SPL G+ V+ GAGGAGRALAFGA ++GARVVI + E+A LA+ +
Sbjct: 379 AVEEAPVAGGKSPLQGKTVVVIGAGGAGRALAFGAATKGARVVIANRSREKADLLAAALG 438
Query: 348 GAARP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+A +ED+++ + G +LAN+T LGM P+ + PV E Y++VFDAVY P T
Sbjct: 439 SSATSCSWEDLVSGR-VTGDVLANSTSLGMTPHVEESPVGPEVAAKYKVVFDAVYNPLWT 497
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 451
RLL+DA A GA+ V G++MF+ QA+ QF LFTG E P M + V+
Sbjct: 498 RLLQDARAGGAVPVDGLQMFVGQALEQFRLFTGGLEPPAALMEKTVM 544
>gi|115436644|ref|NP_001043080.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|113532611|dbj|BAF04994.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|222618473|gb|EEE54605.1| hypothetical protein OsJ_01836 [Oryza sativa Japonica Group]
Length = 321
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/317 (52%), Positives = 221/317 (69%), Gaps = 6/317 (1%)
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 180
+GE+GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+
Sbjct: 1 MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIA 60
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
PV SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++
Sbjct: 61 NPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQ 120
Query: 241 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 300
C E P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN + P
Sbjct: 121 CCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAVT---P 176
Query: 301 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 360
LAGR+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F+
Sbjct: 177 LAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFR 236
Query: 361 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 420
PE+G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VS
Sbjct: 237 PEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVS 296
Query: 421 GVEMFLRQAIGQFNLFT 437
GVEMFLRQA+GQF FT
Sbjct: 297 GVEMFLRQALGQFERFT 313
>gi|308810206|ref|XP_003082412.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
gi|116060880|emb|CAL57358.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
Length = 809
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 199/465 (42%), Positives = 275/465 (59%), Gaps = 26/465 (5%)
Query: 5 VSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG----TR 60
+RP W GG +GDE +RL++L A +LGA YVD EL A + S +SG T+
Sbjct: 355 TNRPIWEGGRNDGDEDERLDSLWEAYELGAAYVDCELLAAERFFARAPDSFKSGGNGKTK 414
Query: 61 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV--PI 118
I+S + ETPS+ +L + + A GADI+K+ +I ++ R+ +LL
Sbjct: 415 IILSSHNYEETPSDVELAKIHAACVAAGADIVKIACVCKEIEDVERLERLLRERGGEKET 474
Query: 119 IAYSVGERGLVSQLLSPKFNGALVYGSLK-------GTPVLGLPTVESLRQTYKVEHINA 171
IA + E G VS+LL+ KF L +G+++ G P+LG LR Y+V +
Sbjct: 475 IALGMSEHGQVSRLLAAKFGSYLTFGAIRRGAESAPGQPLLG-----ELRDMYRVPTQTS 529
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFS 229
TKV G+I P+GHSK P LHNP N + YVP+ V D+K+F ++ + S DF GFS
Sbjct: 530 STKVMGVIGNPIGHSKSPALHNPCLAAANVDACYVPLLVKDIKQFLASPLFGSEDFVGFS 589
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P+KEA ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE A+++
Sbjct: 590 VTIPHKEAALEACAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYAAAIDAIEVAMEK-- 646
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
K GT + L G+ V+ GAGGAG+ALAFGAK +GA V+I + ERA++LA G
Sbjct: 647 -KTGTPA-AKALEGKTVVVIGAGGAGKALAFGAKFKGANVIIANRSVERAQALADACGGR 704
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
A ED+ + G +LAN T +GM P P L D+ +VFDAVYTP TRLL+
Sbjct: 705 AVSLEDLAEGR-ASGDVLANTTSVGMQPYIAESPAPASVLGDFSVVFDAVYTPLDTRLLR 763
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+A+ AG I SG++MF+ QA QF LFTG+ A MRE VL+
Sbjct: 764 EAKEAGCEIASGLDMFVGQAARQFELFTGETADISLMREAVLSSM 808
>gi|386813870|ref|ZP_10101094.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403367|dbj|GAB63975.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 492
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 255/451 (56%), Gaps = 19/451 (4%)
Query: 6 SRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
+RP GG + G E R+ L LA +L DY+D E + ++ T+ IVS
Sbjct: 55 NRPVREGGKFTGSEEDRISLLKLAVELQVDYIDVEHDSIQKV------NNTGKTKRIVSY 108
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 125
+ +TP +DL + R++ +GADIIK+V N IT+ +I+QLL +P I++ +GE
Sbjct: 109 HNFDKTP--DDLTGIFQRLKQSGADIIKIVPYANGITDNVKIYQLLQQVDMPTISFCMGE 166
Query: 126 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 183
G++S++L KF L + SL+ G ++ L TY V + T ++GLI PV
Sbjct: 167 YGIISRILYKKFGSYLTFASLQSGKESAPGQVSIHELLNTYHVRRQDKHTSIYGLIGNPV 226
Query: 184 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
HS P +HN F+ + ++ IYVP VD + F + D G+SV P+KE+VM D
Sbjct: 227 SHSISPAIHNTLFKEMGFHNIYVPFKVDTIGNFIREFRGLDIKGYSVTIPHKESVMGHLD 286
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
+ +A+ I AVNTI+ R DG+LIG+NTDCEA++ +ED +G A+ L G
Sbjct: 287 GIDQIAKKIGAVNTIVNR--DGRLIGFNTDCEAAVRVLEDI----NNVSGMAAKAGSLQG 340
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 363
+ L GAGG RA+AFG K R A++ IF+ ++ERA+SLA +V R F D+ + +
Sbjct: 341 KKVTLFGAGGVARAIAFGLKEREAQITIFNRNYERAQSLACEVDCFYRKFSDLPALEAD- 399
Query: 364 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 423
I+ NAT +GM P+ P+ + L+ +VFD VY P +TRLL+DA++ G V G+
Sbjct: 400 --IVVNATSVGMFPSVHETPIDKNYLKPNMIVFDTVYNPPETRLLRDAKSLGCRTVGGLS 457
Query: 424 MFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
MF+ QA Q+ L+TG+ E + +I K
Sbjct: 458 MFVHQAAAQYKLWTGQMPSLELIEKIAYKKL 488
>gi|414877458|tpg|DAA54589.1| TPA: hypothetical protein ZEAMMB73_882303 [Zea mays]
Length = 401
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/327 (49%), Positives = 216/327 (66%), Gaps = 6/327 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS +
Sbjct: 63 RPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSSH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E+
Sbjct: 123 NYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSEK 182
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 183 GLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPVK 242
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CDE
Sbjct: 243 QSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCDE 302
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAGR
Sbjct: 303 HDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVI---SPLAGR 358
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVI 331
+ V+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 359 LIVVVGAGGAGKAIAYGAKEKGARVVI 385
>gi|91200495|emb|CAJ73543.1| similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Candidatus Kuenenia stuttgartiensis]
Length = 499
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 254/447 (56%), Gaps = 14/447 (3%)
Query: 6 SRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRFIVS 64
+RP GG + G E +RL+ L A L ADYVD E N+ + S T+ IVS
Sbjct: 60 NRPVREGGKFRGTEEERLQLLKQAIQLQADYVDIEHDSIRNVKKNGNALFAASKTKIIVS 119
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
+ ETP E+L + + + +GADI+K+V N IT+ +I+QLL ++PII++ +G
Sbjct: 120 YHNFRETP--ENLSEIYNTLFQSGADIVKIVTHANSITDNIKIYQLLQQSKIPIISFCMG 177
Query: 125 ERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
E G++S++L F L + SL+ G +E L Y +++ N T V+GLI P
Sbjct: 178 EYGIISRILYKIFGSYLTFASLQKGKESAPGQINIEELLNRYNIKNQNKHTAVYGLIGNP 237
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
V HS P++HN F+ + N +YVP VD++ +F S + + +G+SV P+KE+++ +
Sbjct: 238 VSHSISPVIHNALFKEIGMNCVYVPFKVDEIGRFISEFKKLNISGYSVTIPHKESIINYL 297
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
D+ P+A+ I AVNT++ + + +LIG+NTD EA++T + + G+ A F +
Sbjct: 298 DDADPIAKKIGAVNTVVNK--NNRLIGFNTDLEAAVTVLAEVANVSGHTAADACFKN--- 352
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ + GAGG RA+AFG K GA + + + R +SLA +V G + F + Q
Sbjct: 353 -KHVTIIGAGGVARAIAFGLKMYGADITLVSRNHNRMQSLAGEV-GCS--FTNKNGLQNL 408
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
+ I NATP+GM+P+ + PV + L+ +VFD +Y P +T+L+KDA+ G V G+
Sbjct: 409 ETDIFVNATPVGMYPSINETPVDRKLLKPNMIVFDTIYNPPETKLIKDAKEIGCKTVGGM 468
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREI 449
MF+RQA QF L+T E P + I
Sbjct: 469 PMFIRQAAAQFRLWTDTEPPLNIIENI 495
>gi|397911052|gb|AFO68802.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 355
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 204/308 (66%), Gaps = 15/308 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGDE+KR +AL LA +LGA YVD EL+VA++ + G + IVS +
Sbjct: 61 RPVWEGGQYEGDENKRQDALRLAMELGAAYVDIELEVANDFNNSIAAKKPDGFKIIVSSH 120
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E +G LV+R+QATGADI+K+ + DIT+ ARIFQ+ + Q+P+I +GER
Sbjct: 121 NFHNTPSLEGIGNLVARIQATGADIVKIATTALDITDCARIFQITVNSQIPMIGIVMGER 180
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G+L+ + G PT + L + Y IN DTKV+G+I KPVG
Sbjct: 181 GLISRILSPKFGGYLTFGALEAGAISAPGQPTAKDLVELYNFRLINPDTKVYGIIGKPVG 240
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P+L N +++ + N +YV + VDD++KFF+TYS+ DF GFS P+KEA +K E
Sbjct: 241 HSKSPLLFNESWKSIGLNSVYVHLLVDDVEKFFATYSALDFFGFSCTIPHKEAALKCMAE 300
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ P+A+ I A+N I++RP DGK YNTD +I IED ++ SPLAG+
Sbjct: 301 IDPIAKKIGAINNIVKRP-DGKFKAYNTDYIGAIAGIEDELR------------SPLAGK 347
Query: 305 MFVLAGAG 312
+FV+ GAG
Sbjct: 348 LFVVLGAG 355
>gi|303272087|ref|XP_003055405.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463379|gb|EEH60657.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 256/448 (57%), Gaps = 18/448 (4%)
Query: 3 CNVS-RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS--SHQSGT 59
C V+ RP W GG Y G+E RL AL A +LGA YVD EL A S T
Sbjct: 52 CIVTYRPTWEGGQYAGEEEPRLAALWKAVELGAAYVDCELLAAERFFAAAPPGIKDASAT 111
Query: 60 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QV 116
+ I+S + PS ++L + +R A GAD++K+ V DI ++ R+ LL +
Sbjct: 112 KIILSSHDYDAVPSYDELAEIRARCVAAGADVVKIAAMVKDIVDVTRLQTLLEDAAGSRQ 171
Query: 117 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 174
I +GE G VS+LL+ KF L +G+L+ G PT+ LR Y+V TK
Sbjct: 172 DTIVLGMGEAGQVSRLLAAKFGSFLTFGALRAGAESAPGQPTLRQLRDLYRVPTQTRATK 231
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF--STYSSPDFAGFSVGF 232
V G+I P+ SK P LHNP+ + YVP+ V+D++ F +T+ D+ GFSV
Sbjct: 232 VMGVIGNPIAQSKSPALHNPSLAAAGVDACYVPLLVNDIEAFLKSATFGGDDYVGFSVTI 291
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+KEA ++ CDEV P+A I AVNT+++RP DG GYNTD A+I AIE A+ K
Sbjct: 292 PHKEAALRCCDEVDPVAAEIGAVNTLVKRP-DGTFKGYNTDYVAAIDAIEAAMNA---KR 347
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
GTAS G L G+ V+ GAGGAGR LAFGAK +GA V++ + +RA++LA+ G A
Sbjct: 348 GTAS-GEVLRGKTVVVVGAGGAGRGLAFGAKFKGADVIVANRSLDRAQALATACGGVAVT 406
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DYQLVFDAVYTPRKTRLLKD 410
E L KG +LAN T +GM P D P + + + +VFDAVY P +T+LL+D
Sbjct: 407 LE-ALASGAVKGDVLANTTSVGMTPKVDETPTPKSAIAAGGFDVVFDAVYNPLETKLLRD 465
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
A+ G + SG++MF+ QA QF LFTG
Sbjct: 466 AKEVGCELASGLDMFVGQAALQFELFTG 493
>gi|159472414|ref|XP_001694346.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
gi|158277009|gb|EDP02779.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
Length = 554
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/457 (42%), Positives = 271/457 (59%), Gaps = 19/457 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEG E +RL L +A +GA YVD E K + + S T+ I+S +
Sbjct: 96 RPVWEGGKYEGPEPERLAVLKMAALMGAPYVDVEFKASPYFFADPHEVPLS-TKVILSYH 154
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+TP L L + M+ GADI+KL NDI + AR+ LL + P+IA S+GER
Sbjct: 155 DFKQTPDAAVLNKLATAMRQAGADIVKLAAMANDIGDAARMLDLLRNKDGPMIALSMGER 214
Query: 127 GLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G + +LL+ K+ G L + ++ + G P + L + +A TKVFG+I PV
Sbjct: 215 GQIVRLLAAKYGGHLTFAAMSPERASAPGQPDIGRLAGLFNYRKQSAATKVFGIIGNPVA 274
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYK--EAVMKF 241
SK P++HN F+H+ ++G+YVP+ VDDL++F + + DFAGFSV P+K EA ++
Sbjct: 275 QSKSPLIHNTAFQHIGFDGVYVPLLVDDLERFLAAFKDYDDFAGFSVTIPHKVREAALRA 334
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
+V P+A I AVNT+IR+ +DG GYNTD EA+I+AIE + GT + SPL
Sbjct: 335 AKDVDPVAAQIGAVNTLIRQ-ADGSFKGYNTDWEAAISAIERGLAGNA---GTPAAESPL 390
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR-------PFE 354
GR V+ GAGGAGRALAFGA +RGARV+I + +RA +LA+ + +E
Sbjct: 391 KGRTVVVIGAGGAGRALAFGAAARGARVLIANRSRDRADALAAALAAQYGSAAAAAVSYE 450
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
D+ + G +LAN+T +GM PNT+ PV +++VFDAVY P TRLL DA+A
Sbjct: 451 DLAGGR-VVGDVLANSTSVGMAPNTEESPVPAAVAGQFKVVFDAVYNPLWTRLLLDAKAG 509
Query: 415 GAIIVSGVEMFLRQAIGQFNLFT-GKEAPKEFMREIV 450
GA V G++MF+ QA+ QF LFT G E P E M V
Sbjct: 510 GATPVDGLQMFVGQALEQFRLFTGGSEPPAELMERTV 546
>gi|255542474|ref|XP_002512300.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
gi|223548261|gb|EEF49752.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
Length = 368
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 191/282 (67%), Gaps = 2/282 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW G Y+GDE KR EAL LA +LG+D++D ELKVA + IVS +
Sbjct: 85 RPKWEVGEYDGDESKRQEALRLAIELGSDFIDVELKVAPEFFNSIQGKKPEKVKIIVSSH 144
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E++ LV+++Q+TGADI+K+ + DIT+ AR+FQ+L H QVP+I + ER
Sbjct: 145 NYENTPSVEEIANLVAKIQSTGADIVKVATTALDITDNARMFQVLVHAQVPMIGIVMAER 204
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L+ KF G L +GS++ V G PT+ L Y + I ADTKV G+I P+G
Sbjct: 205 GLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDLLDLYNLRQIGADTKVHGVIGNPIG 264
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK P L+N F+ V +NGIY+P+ VD++ + STYSS DF G+S P+KEA +K CDE
Sbjct: 265 HSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTYSSSDFVGYSYTIPHKEAGLKCCDE 324
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
V P+AQAI A++ +IRRPSDGKL+GYN D +I AIE+A++
Sbjct: 325 VDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGAIEEALR 366
>gi|192758420|gb|ACF05190.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Spirogyra
varians]
Length = 520
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 271/453 (59%), Gaps = 22/453 (4%)
Query: 16 EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 75
E E +L ALH A +LG+D+V+ + ++A K +S + IV+ TP +
Sbjct: 68 EVSEDLKLAALHKAVELGSDFVEVDYELAEKFFSKPLGGAKS--KIIVASFNYESTPPVD 125
Query: 76 DLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSP 135
+L L ++++ T ADI+K++ + NDI++ A+IF+ L + P I++++ RG +S+LL+P
Sbjct: 126 ELIALAAKLKETKADIVKIITAANDISDTAKIFKFLDTTKTPTISFALAARGEISRLLAP 185
Query: 136 KFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHN 193
KFN L Y L K LPTV Y+++ + +KVFG++ P+ S+G +L+N
Sbjct: 186 KFNSFLTYAYLDDKSGSAQELPTVYDAVHVYQIKRLTRQSKVFGVVGNPISQSRGYLLYN 245
Query: 194 PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPYKEAVMKFCDEVHPLAQAI 252
N++GIY+P VDD++ FF T++ PD AG SV P+++ M DEV P A+AI
Sbjct: 246 AGMIAKNFDGIYLPFLVDDVRLFFKTFNMPDLIAGTSVTAPHRQIAMDCIDEVDPAAKAI 305
Query: 253 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAG 312
AV+ I+RRP DG +IGYN D A+I A+E + E + G A PL G + VLAGAG
Sbjct: 306 GAVSAILRRP-DGTMIGYNMDWGAAIYAVEQGLLE--HSGGKAEGKGPLEGVLLVLAGAG 362
Query: 313 GAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG---------AARPFEDILNF---Q 360
GAGR LA+G K +G +++ D+D +RA+ +A+ G A FE L
Sbjct: 363 GAGRGLAYGVKEKGGYLLVADLDLDRAQEVATTFGGDVTSVKELTAPDAFEKTLKKFCGH 422
Query: 361 PEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+K +L +ATP+GM P+ DR ++ L+ Y +VFDAVY P +TRL ++A++ G V
Sbjct: 423 LKKAPVLCHATPVGMKPHVDRTIFADVSALKGYSVVFDAVYNPAETRLQREAKSIGVTTV 482
Query: 420 SGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 451
SGVEMFLR+A QF LFTG AP + R+++L
Sbjct: 483 SGVEMFLREADEQFELFTGGIPAPSQVHRDVLL 515
>gi|384250424|gb|EIE23903.1| shikimate 5-dehydrogenase, partial [Coccomyxa subellipsoidea C-169]
Length = 514
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/456 (41%), Positives = 260/456 (57%), Gaps = 20/456 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-------T 59
RP W GG Y+G E RL L A LGA YVD E A+ + +G T
Sbjct: 63 RPNWEGGQYDGPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPLTT 122
Query: 60 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL--LSHCQVP 117
+ I+S + ETPS+E L LV M GADI K+ + I + AR+ L S + P
Sbjct: 123 KVILSHHDYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGERP 182
Query: 118 IIAYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKV 175
+IA ++GE+GL S++L+PKF G L +G+L G PTV LRQ Y++++ ++ TKV
Sbjct: 183 VIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSATKV 242
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 235
FG++ PV HS+ P LHN + +YVP+ VD+L+ F Y P F+G S+ P+K
Sbjct: 243 FGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAY--PSFSGISITIPHK 300
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
A ++ D+ P+A I A NT++R+P G L YNTD A+I+A+E A+ G K G
Sbjct: 301 LAALECADDADPVAARIGAANTLVRQPG-GGLKAYNTDWSAAISAVEAALG--GSKAGGE 357
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 355
S L G V+ GAGGAG+ALAFGA RGA V++ + L A + D
Sbjct: 358 S---ALKGLRVVVVGAGGAGKALAFGAIERGAEVLVCNRQGHPCTFLIIQWTDMAVEYAD 414
Query: 356 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 415
+ + G +L N+T +GMHP + PVS L Y++VFDAVYTP +T LLKDA+ G
Sbjct: 415 VAAGK-VAGDVLMNSTSIGMHPKENETPVSAGALGGYKVVFDAVYTPLETLLLKDAKDQG 473
Query: 416 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
I VSG+EMF+ QA QF LFTGK AP + MR+ L
Sbjct: 474 CITVSGLEMFVGQAAEQFELFTGKPAPLDLMRQATL 509
>gi|7488788|pir||S48698 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate
5-dehydrogenase (EC 1.1.1.25) precursor - garden pea
(fragment)
Length = 325
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/263 (51%), Positives = 181/263 (68%), Gaps = 10/263 (3%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSGTRFI 62
RP W GG Y+GDE++RL+AL LA +LGADYVD ELKVA +I GK ++ T+ I
Sbjct: 67 RPIWEGGKYDGDENRRLDALRLAVELGADYVDIELKVAHEFYDSIRGKMFNK----TKVI 122
Query: 63 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 122
VS + TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ+L H QVP I
Sbjct: 123 VSSHNYQYTPSVEDLGDLVARIQATGADIVKIATTAVEITDVARMFQILVHSQVPFIGLV 182
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 180
+G+RGLVS++L KF G L +G+L+ V G PT++ L Y + +TKV+G+I
Sbjct: 183 MGDRGLVSRVLCAKFGGYLTFGTLESGVVSAPGQPTIKDLLHLYNFRQLGPETKVYGIIG 242
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
KPV HSK PIL N F+ V +NG++V + VDDL F TYSS DF GFSV P+KE+ +K
Sbjct: 243 KPVSHSKSPILFNEAFKTVGFNGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKESALK 302
Query: 241 FCDEVHPLAQAIAAVNTIIRRPS 263
CDEV P+A++I AVN I+R P+
Sbjct: 303 CCDEVDPVAKSIGAVNXIVRXPT 325
>gi|451981182|ref|ZP_21929555.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
gi|451761592|emb|CCQ90808.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
Length = 495
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 252/457 (55%), Gaps = 33/457 (7%)
Query: 6 SRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
+R K GG + G E +R+ + A +LGA Y+D E +L + ++ ++ I+S
Sbjct: 56 NRAKMDGGQFPGTEEERVAVIKQAIELGAMYIDIETSTPPELL-RSVLENKGKSKAILSH 114
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYS 122
+ T + D Y + M AD++K++ D+++ R+ QLLS +V +IA+
Sbjct: 115 HDFTRTDDKVDALYEL--MTQMPADVLKIITYAQDLSDNLRLLQLLSRARRDEVKLIAFC 172
Query: 123 VGERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGL 178
+GE+G VS++LSP + G L +GSL + P G +L+ Y+V +N D+K+FG+
Sbjct: 173 MGEKGEVSRILSPMYGGWLTFGSLDRGKESAP--GQIPATTLKHIYRVNELNLDSKIFGV 230
Query: 179 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 238
I PV S G ++HN F +N +YVP +V L +FF+TY + F G SV P+KE +
Sbjct: 231 IGDPVNKSMGYLIHNRAFSELNLPNVYVPFWVKSLTRFFNTYQA-YFTGLSVTMPFKEDI 289
Query: 239 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 298
MK + + PLAQ I AVNT++R +D +GYNTD +++A+ A+ E
Sbjct: 290 MKHMNRIDPLAQKIGAVNTVVREGND--WVGYNTDVTGALSALT-AVTE----------- 335
Query: 299 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI-FDIDFERAKSLASDVMGAARPFEDIL 357
L G ++ GAGG +A+ G +GA + + ++ + E+A++LA ++ DI
Sbjct: 336 --LKGTRVLIIGAGGTAKAIGHGVTEQGAALTLTYNRNKEKAEALAQELNAKLISIRDID 393
Query: 358 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 417
+ + I+ N +P GM PNT P L+ +VFD+VY P +TRL+KDA G
Sbjct: 394 AHETD---IVINCSPAGMTPNTKDTPYPARLLKPGMVVFDSVYNPMETRLIKDAREKGCT 450
Query: 418 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++ G+E+F+ QAI Q L+TG P++ + E+V +
Sbjct: 451 VIPGIELFVNQAIEQLKLWTGTTPPRDPLHEVVETRL 487
>gi|452825796|gb|EME32791.1| bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase
[Galdieria sulphuraria]
Length = 521
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 258/461 (55%), Gaps = 19/461 (4%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y G E +RL L A LG +YVD EL+ + K + H T+ I+S +
Sbjct: 62 RPHWEGGNYNGSESRRLSILSEACKLGCEYVDVELEAITR-FEKPSNCH---TKLILSRH 117
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
L S ++L S M + AD+IK+ +++I + +F ++ +VP IA +GE
Sbjct: 118 LWNRPFSHQELANTYSSMLSNQADVIKVACKIDNIEQCEILFHFIAASKVPCIALGMGEA 177
Query: 127 GLVSQLLSPKFNGALVYGSL-KGTPVL-GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S++L+ ++ L + SL KG G + Q Y+++ +++ TK++G++ PV
Sbjct: 178 GQISRILAGRYGAFLTFASLSKGKESAPGQIELNDCIQMYRLKSLSSSTKLYGVVGNPVA 237
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HS P +HN F ++ + +Y P+ V+D + + F G SV P+KE ++ DE
Sbjct: 238 HSMSPAIHNLAFASLSLDCVYCPLAVEDFGSCWKMLNEMGFMGLSVTIPHKETAKRYVDE 297
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERG---YKNGTASFGSP 300
+ LA I A+NT+++ K GYNTDC A+++AIED I +R + T SF +
Sbjct: 298 LDGLALKIGAINTMVKLERGWK--GYNTDCLAAVSAIEDGLIAQRSSSELSHRTNSFSTQ 355
Query: 301 LAGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 359
+ VL GAGGA RA+AFG R + + + +++R K LA+++ A P+E + F
Sbjct: 356 AGAKPLVLILGAGGAARAIAFGLLERSYNIYVVNRNYDRCKKLAAELGIEAIPWEGLRRF 415
Query: 360 QPEKG---AILANATPLGMHPNTDRVPVSEETLRDYQ---LVFDAVYTPRKTRLLKDAEA 413
E ++ +T +GMHPN P+S + L+ LVFD VY P +TR L++A
Sbjct: 416 LLEHKDSIDVIIQSTSIGMHPNVHDTPLSFDDLQSLSKKPLVFDVVYNPVETRFLREARE 475
Query: 414 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
G +VSG+EMF+RQA+ QF L+TG +AP E MR++VL +
Sbjct: 476 VGCYVVSGLEMFVRQAVYQFELWTGSKAPVEQMRQVVLKRL 516
>gi|32474293|ref|NP_867287.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|417304128|ref|ZP_12091163.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
gi|32444831|emb|CAD74833.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|327539589|gb|EGF26198.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
Length = 496
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 230/449 (51%), Gaps = 25/449 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 301
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDDR--LGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|421613663|ref|ZP_16054736.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
gi|408495622|gb|EKK00208.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
Length = 496
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 229/449 (51%), Gaps = 25/449 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TP E+L L M A ADI+K+ N ++ R+ L + +P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNANIPTIGICMGEI 169
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 301
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDDR--LGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|440716706|ref|ZP_20897210.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
gi|436438203|gb|ELP31763.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
Length = 496
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 230/449 (51%), Gaps = 25/449 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 301
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDDR--LGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEILAADIGCRVIDWEE---RHE 397
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|449134129|ref|ZP_21769633.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
gi|448887232|gb|EMB17617.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
Length = 496
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 230/449 (51%), Gaps = 25/449 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 301
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDDR--LGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+MF+RQA Q+ LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQYKLFTGQEASIELMRKKI 486
>gi|449017210|dbj|BAM80612.1| fusion protein of 3-dehydroquinate dehydratase and shikimate
5-dehydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 254/474 (53%), Gaps = 31/474 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL------KVASNILGKQYSSHQSGTR 60
RP GGL + ++H+R+ L A G +YVD EL ++ ++ Q + R
Sbjct: 68 RPVCEGGLSDMNDHERVRLLQRAVQHGVEYVDVELANMDLFRMPESV---QLQDASTRPR 124
Query: 61 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPI 118
IVS + +E +L + + + ATGADI K+ +D+ + AR+F LL P
Sbjct: 125 LIVSYHSFTRPLTEAELAEIYTAIVATGADICKIAMMCHDLCDNARLFALLKRTAGSKPT 184
Query: 119 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKV 175
IA +GE G +S++L+ KF A++ + P +E L Y+ +N DT V
Sbjct: 185 IAIGMGEYGQISRVLAAKFGPAMLTFTTLSEARASAPGQFRIEELIDHYRFHSLNPDTTV 244
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGF 232
+G+I PV HS P +HN F N +Y+P V D L+KF T + G SV
Sbjct: 245 YGVIGAPVRHSMSPRIHNHAFGLCRLNHVYLPFLVQDGSKLQKFLDTMTQFGLRGASVTI 304
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K+ +M+ DE+ +A+ I AVNTI+ P G+ GYNTD +A++ A+ + + G +
Sbjct: 305 PHKQRIMECLDELDDVAKQIGAVNTIVVDPLTGRRKGYNTDWQAAVDAVSETLMP-GIEQ 363
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMG--- 348
G A + L R VL GAGGA RA+AFG G ++ I + ERA+SLA+D+
Sbjct: 364 GQARL-TALQRRHVVLLGAGGAARAIAFGVVHCGCGKLTIVNRTLERARSLANDLSPFGK 422
Query: 349 ---AARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
A ED Q E+ IL N+T +GMHP+ + VPV EE L + LVFDAVY
Sbjct: 423 TELVALSLEDFCQQQRNPATRERIDILMNSTSIGMHPDVNVVPVPEEILEPHCLVFDAVY 482
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL A+ G + V GVEMF+RQA QF ++TG AP + MR IVL +
Sbjct: 483 NPIETRLLSLAKRRGCLTVDGVEMFVRQAAAQFTIWTGLRAPAQEMRNIVLQEL 536
>gi|283781777|ref|YP_003372532.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440230|gb|ADB18672.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
Length = 495
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 235/450 (52%), Gaps = 28/450 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVS 64
R + GG + E +R L A G +YVD E +A +I GK T+ IVS
Sbjct: 59 RRQRDGGRWSRSEDQRQVLLRQAIASGVEYVDLEEDIAGSIPRFGK--------TKRIVS 110
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
+ ETP E+L L RM ADI+K+ + ++ R+ QL+ ++P +A ++G
Sbjct: 111 YHNFQETP--ENLAALHERMSKLDADIVKIATMAHTPSDTTRLVQLMKGAKIPTVAIAMG 168
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKP 182
E G S++L KF L Y + L G + E +R Y + INADT+VFG+++ P
Sbjct: 169 EIGTPSRILGGKFGSPLTYAAFSSDRELAPGQLSYEQMRAVYHYDDINADTEVFGVVADP 228
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
VGHS P+LHN FR ++ N +Y+P+ V + L KF G SV P+KE V++
Sbjct: 229 VGHSMSPLLHNAAFRALSMNRVYLPLRVPREHLAKFLQDCPELGIKGLSVTIPHKEEVIQ 288
Query: 241 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 300
+ IAA NT+I + +GK +GYNTD AS+ +I+ G S
Sbjct: 289 HLVKTDDATTEIAACNTVIWK--EGKPVGYNTDYRASMASIDRLF-------GGDEKQSG 339
Query: 301 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 360
LAG+ +L GAGG +A+A G + RG VVI E++++LA AR + L
Sbjct: 340 LAGKTALLLGAGGVSKAIACGLRRRGCDVVIASRTLEKSEALAKKF--KARTIDWKLRHS 397
Query: 361 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 420
+ ++ N TPLGMHPN D P+ E + FD VY P +T +K A AGA ++
Sbjct: 398 VQ-AHLVVNGTPLGMHPNLDESPIDEGYFSTDMVAFDTVYNPEQTLFIKRAREAGAKTIT 456
Query: 421 GVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
G++MF+ QA QF LFT + P + MR+ +
Sbjct: 457 GIDMFVGQAALQFKLFTAHDPPMDLMRQTI 486
>gi|397911048|gb|AFO68800.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 246
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 178/258 (68%), Gaps = 12/258 (4%)
Query: 190 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 249
+L+N F+ V ++G+YV + VDD+ KF TYSSPDF GFS P+KEA + DE+ P+A
Sbjct: 1 LLYNQAFKSVGFDGVYVHLLVDDITKFLRTYSSPDFVGFSCTIPHKEAALGCLDEIDPVA 60
Query: 250 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 309
++I AVN IIR PSDGKL GYNTD +I+AIED ++ SPLAG++FV+
Sbjct: 61 KSIGAVNCIIRSPSDGKLSGYNTDYFGAISAIEDGLQ------------SPLAGKLFVVI 108
Query: 310 GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILAN 369
GAGGAG+ALA+GAK +GAR+VI + +ERA+ LA V A ++ F PE G ILAN
Sbjct: 109 GAGGAGKALAYGAKEKGARIVIANRTYERARELAEIVGARALSLAELDTFHPEDGMILAN 168
Query: 370 ATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
+T +GM P D P+ ++ L +Y LVFDAVYTP+ TRLL++AE GA +VSG+EMF+RQA
Sbjct: 169 STSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQA 228
Query: 430 IGQFNLFTGKEAPKEFMR 447
Q+ FTG APKE R
Sbjct: 229 YEQYERFTGLPAPKELFR 246
>gi|449531177|ref|XP_004172564.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like, partial [Cucumis
sativus]
Length = 328
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 161/246 (65%), Gaps = 2/246 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + + IVS +
Sbjct: 83 RPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFKVIVSNH 142
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
+TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII + +R
Sbjct: 143 NYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIGLVMKDR 202
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+I PVG
Sbjct: 203 GFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGIIGNPVG 262
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV K+CDE
Sbjct: 263 DSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDE 322
Query: 245 VHPLAQ 250
V +A+
Sbjct: 323 VDSVAK 328
>gi|320102191|ref|YP_004177782.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749473|gb|ADV61233.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 527
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 226/450 (50%), Gaps = 26/450 (5%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVSCNLDC 69
GG++ DE +R L A +G DYVD E +A I GK + I+S +
Sbjct: 65 GGIWRQDEERRQRLLREAIVMGVDYVDIEADIAKEIRRFGK--------VKRIISYHNFK 116
Query: 70 ETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLV 129
ETP E L ++ +M ADI+K+ I + A + + S VP IA ++GE G
Sbjct: 117 ETPKE--LPDIIQKMATLDADIVKVATIATSIQDAAFVLKTASEAPVPTIAIAMGEVGFF 174
Query: 130 SQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSK 187
+++L K+ L Y S GLP L++ Y+ E I++ T+V+G+I PV S
Sbjct: 175 TRILGAKYGAPLTYASFNPDRSFAPGLPNFRDLKRDYRFEKIDSATEVYGVIGDPVAQSL 234
Query: 188 GPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 245
P++HN F H N +YVP V + L FF + G SV P+KEA+ + DE
Sbjct: 235 SPMVHNAIFEHYGQNKVYVPFKVAEGKLPTFFESLDFLKLKGLSVTIPHKEAIRQHLDEE 294
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
+ + + NT+ RP DG +G+NTD A I +EDA+ G N S PL G+
Sbjct: 295 DDIVETTGSCNTVEIRP-DGTRVGHNTDYPAVIETLEDALG--GRPNPALS---PLEGKQ 348
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
+L GAGG R++A+ GA V I + E++K+LA +V P+ + +
Sbjct: 349 ALLVGAGGVARSIAYALTRHGAGVTIVARNDEKSKALAEEVGCKFVPWTMRASTLSD--- 405
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
IL NATP+GMHP + P+ R+ LVFD VY P T LK I +GVEMF
Sbjct: 406 ILINATPVGMHPEVNETPLPPAAFRENILVFDTVYHPENTLFLKLGREHNCKIATGVEMF 465
Query: 426 LRQAIGQFNLFTGKEAPK-EFMREIVLAKF 454
+RQA Q F G E P + +R +V KF
Sbjct: 466 VRQAARQARFFAGVENPPLDVIRGLVRRKF 495
>gi|406829999|ref|ZP_11089593.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 492
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 233/444 (52%), Gaps = 28/444 (6%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 71
GG + G E R+ L A GADYVD E +AS+I +Y T+ IVS + T
Sbjct: 63 GGKWRGTEEARIRLLRTAIVSGADYVDLEDDIASSI--PRYGK----TKRIVSHHDFNGT 116
Query: 72 PSE-EDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVS 130
P E++ ++ M DIIK+V N ++ R+ +L+ ++P +A+ +G+ G+ S
Sbjct: 117 PDHIEEVWAEIAEM---NPDIIKVVTLANSPSDCVRMLKLVKDAKIPTVAFCMGDFGVWS 173
Query: 131 QLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKG 188
++ K Y + + G + + ++ Y E INA T++FG+I P+GHS
Sbjct: 174 RVACGKLGSPFTYATFSQDREVAPGQLSFQDMKHIYHYETINAKTQLFGVIGDPIGHSLS 233
Query: 189 PILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
P+LHN R + +NG+YVP+ V D L + + + DF G SV P+KEAV+
Sbjct: 234 PLLHNEAMRKIGFNGVYVPLRVARDQLTQTLADLETLDFRGLSVTIPHKEAVLAKFPRCE 293
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 306
+ I A NT+ R SD + +NTD +A++ +++ A+ G L G+
Sbjct: 294 EFVRQIGAANTLFR-GSDNQWQSFNTDYQAALDSVKLALPT----------GDTLEGKRV 342
Query: 307 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAI 366
+L GAGGA RA+ G G +VI RAK+LA + +E N E I
Sbjct: 343 LLLGAGGAARAIGMGITRAGGALVITSRTSARAKTLAEQLNCRHVTWE---NRGAEYADI 399
Query: 367 LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 426
L N TP+GM+P D+ P + LR+ +VFD +YTP T L+K+A+ G VSG+EMF+
Sbjct: 400 LINCTPVGMYPEMDQTPFQQNWLREGMIVFDTIYTPENTLLIKEAQVRGCKTVSGIEMFI 459
Query: 427 RQAIGQFNLFTGKEAPKEFMREIV 450
RQA QF FTGK A + +RE +
Sbjct: 460 RQAAAQFERFTGKPASLDDLRETL 483
>gi|430743501|ref|YP_007202630.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
gi|430015221|gb|AGA26935.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 228/441 (51%), Gaps = 23/441 (5%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 71
GG++ G E +R + L A LG DYVD E+ +A I +++ T+ IVS + +T
Sbjct: 63 GGIWRGSEDRRQQLLREAIALGVDYVDLEMDIAPKI--RRFGK----TKRIVSYHNLKKT 116
Query: 72 PSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 131
P+E L + + AD++K+ + + R+ L + VP + ++GE G ++
Sbjct: 117 PAE--LIEIAEQCDEMDADVVKIATKAESLADALRVLSLGTRAVVPTVTIAMGELGFFTR 174
Query: 132 LLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 189
+L K+ Y + + T G+PT + L+ Y + INA+T+V+ +I P+ S P
Sbjct: 175 VLGAKYKAPFTYAGINPERTFAPGMPTFQVLKNDYAYDMINAETEVYAVIGDPIEQSLSP 234
Query: 190 ILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 247
+HN FRH+ N + VP+ + L+ + GFSV P+KE ++K D+
Sbjct: 235 AIHNAAFRHLGLNKVLVPLLIPAGTLEASLKELEVLNIQGFSVTIPHKEELVKLLDQKDG 294
Query: 248 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 307
+ + NT++ + GK IG+NTD A++ +E + G K G A SPL + +
Sbjct: 295 AVERTGSCNTLVFQ--KGKKIGHNTDYRAAMDTLEAGMG--GLKEGGA---SPLMDKQVL 347
Query: 308 LAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAIL 367
+ GAGGA R+++FG RGA V I + RA LA +V + + E I+
Sbjct: 348 ILGAGGAARSISFGCSRRGASVTITNRHDARATKLAEEVGCRTVSWAQRASTLAE---IV 404
Query: 368 ANATPLGMHPNTDRVPVSEETLRDYQLV-FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 426
N TP+GMHPN D PV T ++ FD +Y P T LK A I ++GV+MF+
Sbjct: 405 VNCTPVGMHPNVDDTPVPPATFSTPGMIAFDTIYHPENTMFLKLARERECIPINGVDMFV 464
Query: 427 RQAIGQFNLFTGKEAPKEFMR 447
QA QF L+TG +APK+ MR
Sbjct: 465 GQAAEQFKLYTGMDAPKDIMR 485
>gi|87311736|ref|ZP_01093851.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
gi|87285520|gb|EAQ77439.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
Length = 495
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 234/449 (52%), Gaps = 26/449 (5%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R + GG + G E +R L A GADYVD E +A+NI +Y + T+ I+S +
Sbjct: 58 RREQDGGRWAGMEAERQMVLRTAIVDGADYVDIEEDIAANI--PRYGT----TKRIISYH 111
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
ETP+ D+ + RM DI+KL N + R+ +L VP IA +G+
Sbjct: 112 NFRETPA--DIEEIHERMCKLDPDIVKLATMANSPHDNIRMLKLAQRNNVPTIALCMGDM 169
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +++L K+ + Y + L G + +R+ Y + INA+T+++G+I+ P+G
Sbjct: 170 GTPTRILGAKYGVPITYSTYSNERTLAPGQIGYQQMREVYGYDQINAETEIYGVIADPIG 229
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFST-YSSPDFAGFSVGFPYKEAVMKF 241
HS P LHN FR N Y+P V + L F + + G SV P+KE +++
Sbjct: 230 HSLSPQLHNACFRDQGSNRCYLPFRVPREHLASFIQEDCPALEIKGLSVTIPHKETIVRM 289
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
+ + Q I A NT++ +G G+N+DC+A++ ++ A+ + +P
Sbjct: 290 IKKPNAAVQGIGAANTVLF--DEGGPSGFNSDCDAALASLSTALPQ--------DVANPY 339
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
+ ++ G+GG +A+A+G K+RG V+I E A LA + +ED
Sbjct: 340 ENKTALVLGSGGVAKAIAWGLKNRGVDVIIASRTDENADDLAKGLGCRMVSWED---RGL 396
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
E+ IL N TP+GMHPN + P+ + LR +VFD VY P +T L+K+A +V+G
Sbjct: 397 ERVDILINGTPVGMHPNVNESPIDKVRLRAGMVVFDTVYNPEQTLLIKEARQRECRVVTG 456
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+MF+RQA Q+ LFTG E ++ MR+ +
Sbjct: 457 VDMFVRQAALQYQLFTGSEPSRDLMRDTL 485
>gi|356533611|ref|XP_003535355.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 455
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 221/370 (59%), Gaps = 14/370 (3%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKV--ASNILGKQYSSHQSGTRFIVS 64
RP GG +GDE +R +AL A +LG+++VD + + +I GK+ S + IVS
Sbjct: 83 RPIXEGGESDGDESQRQDALRQAIELGSEFVDDDRAKGGSXSIGGKKPES----VKIIVS 138
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-----SHCQVPII 119
+ TPS E++G L +R+QA+GAD++K+ + D T I +F + QVP+I
Sbjct: 139 SHNLERTPSVEEIGNLAARIQASGADVVKIATTAFDNTXILNLFMKIFKKXXKKKQVPMI 198
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFG 177
++ G+ +L KF G L +GS++ + G T++ L Y I TKV G
Sbjct: 199 GIAMRXEGIFVTVLCAKFGGFLTFGSVEAGAISAPGQXTIKELLDLYNFRQIGVGTKVHG 258
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 237
+ P+ SK P L+N TF+ V ++G+Y+P+ VD++ F +TYSSPDF G++ P KE
Sbjct: 259 AVGNPISDSKSPHLYNATFKSVGFDGVYLPLLVDNVSDFLNTYSSPDFVGYNYTIPPKEN 318
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
++ CDE+ P+A+AI A++ +I+RP+DGKL+G N D +I AIE+ + + + S
Sbjct: 319 GLRCCDEIDPIAKAIGAISCMIKRPNDGKLLGNNFDYLGAIAAIEERLHLQDSNRRSISG 378
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 357
SPL G++FV+ GAGGAG+A+A+G K +GARVV+ + + +AK L + V G A ++
Sbjct: 379 CSPLCGKLFVVMGAGGAGKAIAYGGKEKGARVVVANRIYAKAKELVTKVGGEAITISELE 438
Query: 358 NFQPEKGAIL 367
+F KG +L
Sbjct: 439 SFH-TKGLVL 447
>gi|296122090|ref|YP_003629868.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014430|gb|ADG67669.1| 3-dehydroquinate dehydratase, type I [Planctomyces limnophilus DSM
3776]
Length = 517
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 230/444 (51%), Gaps = 32/444 (7%)
Query: 13 GLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 72
G + G E +R L A GADYVD E +A I ++Y T+ I+S + +TP
Sbjct: 67 GRFRGTEEERQTILRTAILSGADYVDIEADIAPQI--RRYGK----TKRIISHHDFDQTP 120
Query: 73 SEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQL 132
+DL ++M AD++K+V N + R+ +L+ QVP + + +GE+G+++++
Sbjct: 121 --DDLEEKYAQMCKLDADLVKIVTMANRAEDCVRMLKLVEGAQVPTVGFCMGEKGMLTRV 178
Query: 133 LSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 190
L F Y + L G + + +R+ ++ E I T + G++ PV HS P+
Sbjct: 179 LCGAFGSPFTYATFNKERELAPGQFSFDEMRKMFRYEQITRKTILLGVLGDPVAHSLSPL 238
Query: 191 LHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMK---FCDEV 245
LHN R ++G+Y+P+ V +L + Y F G+S P+KE+V++ CD+
Sbjct: 239 LHNTLMRKAGFDGVYLPLRVSASELSETLDAYEQLGFTGYSATIPHKESVLQKYPMCDD- 297
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
+AI A NT+ R + G NTD +A++ AI +K G L G+
Sbjct: 298 --FVRAIGAANTVYRDQA-GHWACSNTDYQAALDAILSGLKP----------GESLTGKR 344
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
+L GAGGA +A+ + A V+ +R+++LA + G A +E N E
Sbjct: 345 VLLLGAGGAAKAIGMAMQKSEAITVVASRTLKRSQALADQIGGRAITWE---NRGSEFAD 401
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
IL N TP+GMHPN + P LR+ LVFD +YTP +T L+KDA G V+GVEMF
Sbjct: 402 ILINCTPVGMHPNLNESPFPIHWLREGMLVFDTIYTPERTLLIKDARDRGCTTVTGVEMF 461
Query: 426 LRQAIGQFNLFTGKEAPKEFMREI 449
+RQA QF LFTG + + +R I
Sbjct: 462 IRQATAQFRLFTGLKLSLDDVRTI 485
>gi|325110056|ref|YP_004271124.1| 3-dehydroquinate dehydratase [Planctomyces brasiliensis DSM 5305]
gi|324970324|gb|ADY61102.1| 3-dehydroquinate dehydratase; shikimate dehydrogenase [Planctomyces
brasiliensis DSM 5305]
Length = 496
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 219/442 (49%), Gaps = 22/442 (4%)
Query: 13 GLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 72
G + G E +R + L A G ++VD E+ +A +I +Y TR IVS + ETP
Sbjct: 64 GKWRGSEDERQKLLRAAIVDGVEFVDIEVDIAKSI--PRYGK----TRRIVSYHNFEETP 117
Query: 73 SEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQL 132
++L + ++ A+ D+ K+V N + R+ +L++ ++P + + +GE GL +++
Sbjct: 118 --DNLEEIHKQIAASDPDVAKIVTMANSPADGVRMLELVAKSKIPTVGFCMGEFGLFTRV 175
Query: 133 LSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 190
L K+ Y S L G + + + Y+ + I+ DT+VFG++ P+ HS P
Sbjct: 176 LCTKYGAPFTYASFSSERELAPGQISFREMLELYRHDQIDVDTRVFGVLGDPIAHSYSPR 235
Query: 191 LHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 248
LHN F N +Y+P + + + + GFS+ P+KE ++ D
Sbjct: 236 LHNDAFEAEKINAVYLPFRISEQHFEDSMRALRRLNTEGFSITIPHKERIVTQADHTDDD 295
Query: 249 AQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVL 308
A+ I A NT+ R G NTD EA++TA+ A K+ G+ G R ++
Sbjct: 296 AKEIGAANTLYRN-QKGIWFATNTDFEAAMTALRQATKKAGWPEGG------FKDRKVLI 348
Query: 309 AGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILA 368
GAGG RA+ G G ++V+ RAK LA + +E+ +PE +L
Sbjct: 349 LGAGGVARAIGHGVVRGGGQLVVTGRTRSRAKELAEKLGCQHCSWENRGAQRPE---VLI 405
Query: 369 NATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQ 428
N TP+GM PN D P + + D +VFD +Y P T L+K A I SG+EMF+RQ
Sbjct: 406 NCTPIGMFPNMDETPYEQHWMTDGMVVFDTIYNPENTLLVKQARERDCHIASGLEMFIRQ 465
Query: 429 AIGQFNLFTGKEAPKEFMREIV 450
A QF FTG+ P + MR +
Sbjct: 466 AAAQFECFTGQNPPLDTMRNTL 487
>gi|149175942|ref|ZP_01854559.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
gi|148845096|gb|EDL59442.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
Length = 498
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 219/443 (49%), Gaps = 23/443 (5%)
Query: 13 GLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 72
G + E +R L A +YVD E +A I + R I N D ETP
Sbjct: 64 GRWNKTEEQRQALLRTAIVSEVEYVDIEDDIAGTI-----PRYGKTKRIISHHNFD-ETP 117
Query: 73 SEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQL 132
+DL + + M DI+KLV N + R+ QL+++ +VP I + +GE G++S++
Sbjct: 118 --DDLEEIHAAMCKKDPDIVKLVTMANSPGDSVRMLQLVANAKVPTIGFCMGEYGVISRI 175
Query: 133 LSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPI 190
L K+ Y + L G + + Y+ + I +T V+G+I P+ HS P+
Sbjct: 176 LCGKYGSPFTYATFSRERELAPGQLAFSEMSRIYRYDEIGPETPVYGVIGDPIAHSLSPL 235
Query: 191 LHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 248
+HN F+H + +Y+P + D LK+ + + G+SV P+K ++ DE
Sbjct: 236 IHNLAFKHDKLDAVYLPFRIPKDRLKETLKEFEWLNVQGYSVTIPHKAGALELADEADEA 295
Query: 249 AQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 307
++ + NT+ + D K NTD +A++ +I + +G + P+ G+ +
Sbjct: 296 SKKMGVANTLFK--DDKKAWQARNTDYDAALDSIRLGLDPQG-----KATADPINGKQVL 348
Query: 308 LAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAIL 367
L GAGG RA+ G + G + I + R + LA D+ +E N + IL
Sbjct: 349 LLGAGGVSRAIGAGIVAAGGVLTISNRSRTRGEQLAKDLGCNHCTWE---NRGSGRYDIL 405
Query: 368 ANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLR 427
N T +GM+PN + P ++ +++ LVFD VY P T LLK A G VSG+EMF+R
Sbjct: 406 VNGTAVGMYPNVNDTPFAQNFMQEEMLVFDTVYNPENTLLLKQARERGCKTVSGIEMFVR 465
Query: 428 QAIGQFNLFTGKEAPKEFMREIV 450
QA Q+ LFTGKEAP E MR +
Sbjct: 466 QAAAQYKLFTGKEAPLEVMRNTL 488
>gi|424513634|emb|CCO66256.1| predicted protein [Bathycoccus prasinos]
Length = 562
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 246/473 (52%), Gaps = 30/473 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT-----RF 61
RP W GG +GDE RL L GA YVD EL +A K + G +
Sbjct: 86 RPTWEGGQDDGDEETRLRCLWEGFRAGATYVDCEL-LAIERFAKAKPDERDGVIKGPGQM 144
Query: 62 IVSCNLDCE-TPSEEDL-GYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ--- 115
++ + + E TPS + L +++A DI K+ DI ++ R+ ++L +
Sbjct: 145 LICSSHEYELTPSLDVLLKEKYEKIRANDMCDIAKIACVCQDINDVGRLAKVLEKARGDG 204
Query: 116 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINA-D 172
P + E GL+S+LL+ K L +GS++ G PT+ L + Y+V +
Sbjct: 205 YPCAVLGMSEHGLISRLLATKLGSYLTFGSIRAGFESAPGQPTLRDLSELYRVNTSQTRE 264
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNG-IYVPMFVDDLKKFFSTYS-----SPDFA 226
TK+ G++ P+ SK P LHN + YVP+ V D +F S + D+
Sbjct: 265 TKILGVMGNPIAQSKSPQLHNKALISAKVDDKCYVPLLVKDFAEFVENESLFNNKNNDWV 324
Query: 227 GFSVGFPYKEAVMKFCDE-VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GFSV P+KE+ +KFC E V P+A+ I AVNT++R+ DG GYNTD A+I AIE A+
Sbjct: 325 GFSVTIPHKESALKFCGENVDPVAKQIGAVNTLVRQ-KDGSFRGYNTDYVAAIGAIEKAL 383
Query: 286 KERGYKNGTASFGSP-LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 344
++ + S L G+ ++ GAGGA R LAFGAK + A VV+ + +RA +LA
Sbjct: 384 DPTIPRDAAETTDSKALKGKTVLVLGAGGAARGLAFGAKFKEANVVVANRSKDRADALAE 443
Query: 345 DVMGAARPFEDIL--NFQPEKGAILANATPLGM-HPNTDRVPVSEETLRDYQLV--FDAV 399
G + ED+ NF K ++AN T LGM + P +E ++ V FDAV
Sbjct: 444 ACGGTSISVEDVASGNFGDLKIDVIANTTSLGMVGERVNETPCPKEAIKKSGAVVCFDAV 503
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT-GKEAPKEFMREIVL 451
Y P +TRLL++A+ G + SG++MF+ QA QF LF G++A MRE VL
Sbjct: 504 YNPLETRLLREAKECGLTVASGLDMFVGQAARQFELFNEGQKADYAGMRETVL 556
>gi|357512135|ref|XP_003626356.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355501371|gb|AES82574.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 224
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 141/241 (58%), Gaps = 46/241 (19%)
Query: 54 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH 113
+H + I SC +D TP E+L LV+ MQATG DIIKLV DITEI RIF L +
Sbjct: 8 NHNIHGKIIASCFVDGITPPTEELLQLVALMQATGTDIIKLVAHAADITEITRIFSLFPY 67
Query: 114 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT 173
CQVP+IAYS+GE GL+SQ L PKF G V GSL P+ GLP++ SL++ YK+EH+NA+T
Sbjct: 68 CQVPLIAYSIGESGLISQFLCPKFGGFFVCGSLARNPIPGLPSLHSLQEAYKLEHVNANT 127
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
+VFGLIS S A
Sbjct: 128 EVFGLIS----------------------------------------SQNQLATAK---- 143
Query: 234 YKEAVMKFCDEVHPLAQAIA--AVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
YKE V++FCDE+HPLAQ + AVNTI R P DGKL+GYNTDCEASITAIEDA+ Y
Sbjct: 144 YKEEVLRFCDEIHPLAQLVLYRAVNTITREPRDGKLVGYNTDCEASITAIEDALIGNSYY 203
Query: 292 N 292
N
Sbjct: 204 N 204
>gi|384247564|gb|EIE21050.1| aldolase [Coccomyxa subellipsoidea C-169]
Length = 528
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 242/469 (51%), Gaps = 32/469 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y G + RL L A GA Y+D E A + + S T I+S +
Sbjct: 65 RPMWEGGQYSGPDLPRLAVLKAAAGAGAQYIDVEHLAAGSFFSSE-GEVPSSTAVIISHH 123
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP----IIAYS 122
ETPS+E L LV M GADI K+ + + + AR+ L + P +IA +
Sbjct: 124 NYSETPSDEALEALVEDMFDEGADIAKIATTAKCVEDSARMLALPG--KAPGGWLVIALA 181
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLIS 180
+GE GL ++LL+PKF G L++G+L + G T+ LR+ Y+V DTKVFG++
Sbjct: 182 MGEAGLPTRLLAPKFGGYLIFGALSAEESSATGQSTIAELRRLYRVHSQTEDTKVFGIVD 241
Query: 181 KPVGHSKGP----ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
P +GP +LHN + IYVP+ DDL+ + P F+GF + P++
Sbjct: 242 SPAAAVRGPPWSAVLHNAALAAAGMDTIYVPLCADDLRSCLDAF--PCFSGFCLTAPHQV 299
Query: 237 -AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
A ++ DE A I A +T+ +R +DG+L YNT+ A+++A+E A+ G+
Sbjct: 300 LAALECADEADRSAARIGAADTL-QRQTDGRLQAYNTEWAAAVSALEAALGGAWCNAGSP 358
Query: 296 SFG-SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD-------IDFERAKSLASDVM 347
G S L G+ V+ GAGGAGRALAFG +GARV++ D + + A LA +
Sbjct: 359 QKGESALRGKCVVVVGAGGAGRALAFGVVEKGARVIVCDRQVTSSALQQQMAGILAISLG 418
Query: 348 GAARPFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A + D+ + G +L N+ P M + VS L Y++V DA T +T
Sbjct: 419 SGASAVKHADVAAGRV-AGDVLINSMPACMEESL----VSAAALSCYRVVLDATCTSLQT 473
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
RLL++A+ G VSG+E+ + QA QF L TG AP MR+ L +
Sbjct: 474 RLLREAQELGCATVSGLEISVTQAAQQFELLTGAPAPVALMRQATLERM 522
>gi|337292890|emb|CCB90890.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Waddlia chondrophila 2032/99]
Length = 456
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 213/436 (48%), Gaps = 61/436 (13%)
Query: 26 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 85
L A D GADYVD E + ++ R I S +L ETP E+L M+
Sbjct: 68 LKAALDAGADYVDVE----------EINTSLPLERCIYSIHLQ-ETPPLEEL---YQSMK 113
Query: 86 ATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYG 144
A+GA IIK+V + + I LL + + +IA+ +GE+GL+S+ +P + +G
Sbjct: 114 ASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEKGLLSRYFAPAYGSFCTFG 173
Query: 145 SL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
++ K P G P LR+ +K + +T + G+I P+ HS P +H +
Sbjct: 174 AIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDPITHSLSPAIHQAAYEADG 227
Query: 201 YNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 258
N +++P +DL K G +V P+KE+V+ DEV AQAI AVNTI
Sbjct: 228 LNFLFLPFHTTKEDLPKILDLMRQFPLKGLAVTIPHKESVIPMLDEVDVEAQAIGAVNTI 287
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
I GKL GYNTD ++ ++ + L G+ + G GGA +A
Sbjct: 288 INH--GGKLTGYNTDVFGAVQPLQKR--------------TDLRGKRVAILGNGGAAKAF 331
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 378
A+G + G+ V +F + E+ K Q + IL TP+GM PN
Sbjct: 332 AYGLQKEGSVVTLFGRNLEKLKE------------------QLMESEILIQTTPVGMAPN 373
Query: 379 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
TD+ V + L LVFD VY P KT+LLKDAE AG +SG+EMF+ QA Q+ FT
Sbjct: 374 TDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISGLEMFMIQAREQYKFFTS 433
Query: 439 KEAPKEFMREIVLAKF 454
+EA +E M++ L F
Sbjct: 434 QEANEEAMKKAALNAF 449
>gi|297621526|ref|YP_003709663.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
gi|297376827|gb|ADI38657.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
Length = 456
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 213/436 (48%), Gaps = 61/436 (13%)
Query: 26 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 85
L A D GADYVD E + ++ R I S +L ETP E+L M+
Sbjct: 68 LKAALDAGADYVDVE----------EINTSLPLERCIYSIHLQ-ETPPLEEL---YQSMK 113
Query: 86 ATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYG 144
A+GA IIK+V + + I LL + + +IA+ +GE+GL+S+ +P + +G
Sbjct: 114 ASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEKGLLSRYFAPAYGSFCTFG 173
Query: 145 SL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
++ K P G P LR+ +K + +T + G+I P+ HS P +H +
Sbjct: 174 AIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDPITHSLSPAIHQAAYEADG 227
Query: 201 YNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 258
N +++P +DL K G +V P+KE+V+ DEV AQAI AVNTI
Sbjct: 228 LNFLFLPFHTTKEDLPKILDLMRQFPLRGLAVTVPHKESVIPMLDEVDVEAQAIGAVNTI 287
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
I GKL GYNTD ++ ++ + L G+ + G GGA +A
Sbjct: 288 INH--GGKLTGYNTDVFGAVQPLQKR--------------TDLRGKRVAILGNGGAAKAF 331
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 378
A+G + G+ V +F + E+ K Q + IL TP+GM PN
Sbjct: 332 AYGLQKEGSVVTLFGRNLEKLKE------------------QLMESEILIQTTPVGMAPN 373
Query: 379 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
TD+ V + L LVFD VY P KT+LLKDAE AG +SG+EMF+ QA Q+ FT
Sbjct: 374 TDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTISGLEMFMIQAREQYKFFTS 433
Query: 439 KEAPKEFMREIVLAKF 454
+EA +E M++ L F
Sbjct: 434 QEANEEAMKKAALNAF 449
>gi|449497737|ref|XP_004160503.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 213
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 146/216 (67%), Gaps = 7/216 (3%)
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
+E +KF D PLA AVN ++RR SDGKL GYNTDC +I+AIED + G N +
Sbjct: 2 EELNLKFVD---PLA--TGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDS 54
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 354
+ S LAG++ V+ GAGG G+A+A+GAK +GAR+VI + F+RA+ LA V G +
Sbjct: 55 FAVSSRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLA 114
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
D+ NF PE G IL NATP+GM P D P+ + L+ Y LVFDAVYTPR TRLL++AE +
Sbjct: 115 DLENFHPEDGMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEES 174
Query: 415 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
GA IV G+EMF RQA Q+ FTG APKE +R+ +
Sbjct: 175 GAAIVPGLEMFTRQAYEQYEGFTGLPAPKERIRKFL 210
>gi|383765626|ref|YP_005444607.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
gi|381385894|dbj|BAM02710.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
Length = 528
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 217/433 (50%), Gaps = 44/433 (10%)
Query: 36 YVDFE-LKVASNILGKQYSSHQSGTR--FIVSCNLDCETPSEEDLGYLVSRMQATGADII 92
Y+DFE ++A+ G++ + TR I+S + P++ D +++ G ++
Sbjct: 92 YLDFEHARLAALSAGERADLEDAATRCGLILSTHDFAGRPADLDR-RVLAMADTPGVRVL 150
Query: 93 KLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL---KGT 149
K ++ + + + F+L+ P A +G+ GL S++L+ KF G + + + GT
Sbjct: 151 KAAWAARSLRDNLQAFELIERRLAPTAALCMGDAGLPSRVLARKFGGFVTFAAADRASGT 210
Query: 150 PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF 209
G PT+ LR Y+ + I T+V+G+I PVGHSK P LHN F ++G+Y+PM
Sbjct: 211 -APGQPTIAELRDLYRWDAIGPATRVYGVIGDPVGHSKSPALHNAGFDASGFDGVYLPMP 269
Query: 210 V----DDLKKFFSTY---SSPDFAGFSVGFPYKEAVMKFCDE----VHPLAQAIAAVNTI 258
+ + LK S + S F G SV P+K +++F +E + PLA I A NT+
Sbjct: 270 IPAGYEHLKATLSAWLDHGSLRFRGASVTIPHKADLLRFAEERGATIDPLAARIGAANTL 329
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
I DG L NTDC+A++ + A+ G + G + GAGG RA+
Sbjct: 330 IVG-EDGALAVRNTDCDAALGVVRRALGGVGLR-----------GAAVAVLGAGGVSRAV 377
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMH 376
G G RV +F+ ERA+SLA AA E + GA + NAT +GM
Sbjct: 378 VAGFADAGCRVTVFNRSVERARSLA-----AAFGVEAAPLAEAAAGAADVWINATSIGME 432
Query: 377 ------PNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 430
P+ +P + +VFD VYTP +TRLL+DA AAG + G MFL QA
Sbjct: 433 TAEDPAPDASPLPDPPGSWGPGTVVFDTVYTPPETRLLRDAAAAGCVTAGGTAMFLAQAA 492
Query: 431 GQFNLFTGKEAPK 443
QF +TG EAP+
Sbjct: 493 AQFEAWTGVEAPE 505
>gi|168699805|ref|ZP_02732082.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Gemmata obscuriglobus UQM 2246]
Length = 520
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 227/444 (51%), Gaps = 21/444 (4%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
GG + G+E +R+ + A GA ++VD E +A + +Y + IVS + E
Sbjct: 67 GGRFSGNEQERMMIIRQAIASGAFEWVDLETDIAGAV--PRYGK----VKRIVSYHNTAE 120
Query: 71 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVS 130
TP+ +L + + M AD+ K+ + ++A++ L P +A+ +G+ G +
Sbjct: 121 TPA--NLDDIFADMLKQDADVYKIAVAAQSPADVAKVLHLQRTAPKPTVAFCMGDIGQPT 178
Query: 131 QLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKG 188
+ L+ KF +Y + + GLP+ + R TY V+ I ADT++FG++ PVGHS
Sbjct: 179 RFLALKFGAPWIYAAFNKERGIAPGLPSFDEFRTTYPVQEITADTQIFGVLGDPVGHSLS 238
Query: 189 PILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
P+LHN +R + N +Y+P V L + Y G+SV P+KEA +
Sbjct: 239 PLLHNHMYRKLGVNALYLPFQVPRGQLSQALEVYGQIPVRGYSVTIPHKEAAAALAKQAE 298
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 306
P + NT++RR DG NTD A + +++ + ++ K+G S L+
Sbjct: 299 PTVPFTGSANTLVRR-DDGAFAAANTDLGAILDSLKAHLAQKS-KDGPFVQLSQLS---V 353
Query: 307 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAI 366
++ GAGGA R+ A+G GA++ I ++RA+ LA DV A + N + +
Sbjct: 354 LILGAGGAARSAAYGMHREGAQITISARTYDRAQKLAEDVKCKAVDWHARHNVNFD---V 410
Query: 367 LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 426
L N TP+GMHPN D P L+ +VFD +Y P T L+++A A G ++GV+MF+
Sbjct: 411 LINCTPVGMHPNVDESPCHFSVLKPGAIVFDTIYRPETTLLIREARARGCDTITGVDMFV 470
Query: 427 RQAIGQFNLFTGKEAPKEFMREIV 450
RQA Q LFTG E MR I+
Sbjct: 471 RQAARQIELFTGHVPDTETMRTIM 494
>gi|85859660|ref|YP_461862.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722751|gb|ABC77694.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
Length = 292
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 147/276 (53%), Gaps = 19/276 (6%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 234
+ L+ PVGHS P++H+ +H++ G Y V DL + F G SV PY
Sbjct: 24 LLALLGHPVGHSLSPLMHSTALKHLHLEGRYEAWDVSDLSQAMVDLKRKGFRGASVTIPY 83
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
K +M F D++ A++I AVNT+IRR DG +G NTD E I A+ RG
Sbjct: 84 KRDIMSFLDDIDEQARSIGAVNTLIRR-GDG-FVGANTDWEGLIRALRSVTSIRG----- 136
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 354
R FV+ GAGG RA +G G V+ + +R + LA D + P
Sbjct: 137 ---------RRFVVLGAGGTARAALYGILGEGGGAVVVNRTEKRGRELADDFGCPSYPLT 187
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
+I Q G +L N TP+GM PNT+ PV L + LV D +YTP +TRLL++AE A
Sbjct: 188 EIDTLQ---GDVLINTTPVGMTPNTEVSPVPSAVLSRFSLVADVIYTPLRTRLLREAERA 244
Query: 415 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
G ++SGVEMF+ Q QF L+TG E P + MR++V
Sbjct: 245 GCTVLSGVEMFVEQGAAQFRLWTGLEPPVDLMRQVV 280
>gi|328952377|ref|YP_004369711.1| shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
gi|328452701|gb|AEB08530.1| Shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
Length = 275
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I T +FG++ +PV HS P +HN F + N +YVP V DL + G
Sbjct: 2 ITGATIIFGILGRPVAHSLSPAMHNAAFAALGLNAVYVPFAVQDLVAAVQGLRGLNIGGV 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE ++ DEV AQ I AVNT++ R G L G NTD + ++T +++ I
Sbjct: 62 SVTIPFKEEIIPLLDEVDEEAQTIGAVNTVVNR--QGWLWGCNTDWQGALTPLQEQIA-- 117
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
L+G+ ++ GAGGAGRA+ + + V + D++ +RA++LA +
Sbjct: 118 ------------LSGQQIMVLGAGGAGRAIVYAVRRAAGLVTVADLNPDRARNLAQEFGV 165
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
A P E+I +L NA+P+GM P+ + P+ L +Q+V D VY P +TRLL
Sbjct: 166 ACLPLEEI---DQSTATVLINASPVGMAPHIEATPLPARCLDRFQVVMDIVYQPLQTRLL 222
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
++A A GA + G++M + Q QF LFTG+ +P E MR L
Sbjct: 223 REAAARGARTIDGLQMLIHQGARQFELFTGQPSPVETMRRAAL 265
>gi|326526517|dbj|BAJ97275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG YEGD+ R E L LA +LG DYVD ELKVA + + + IVS +
Sbjct: 70 RPNWEGGRYEGDDATRFETLSLAMELGVDYVDIELKVADKFVDFLSGTKPDKCKLIVSSH 129
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS E+L LV+R+Q GADI+K+ + DI +++R+FQ++ HCQVP+I + ER
Sbjct: 130 NYESTPSCEELANLVARIQEVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLVMSER 189
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++LSPKF G L +G L T G PT+E L Y + I DTKV GLI+ PV
Sbjct: 190 GLMSRVLSPKFGGYLTFGILDATKTSAPGQPTLEELLDIYNIRCIGPDTKVLGLIANPVK 249
Query: 185 HSKGPILHNPTFRHVNYNGIYV 206
SK PILHN + V YN + V
Sbjct: 250 QSKSPILHNKCLQSVGYNAMQV 271
>gi|116626199|ref|YP_828355.1| shikimate dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229361|gb|ABJ88070.1| shikimate dehydrogenase / 3-dehydroquinate dehydratase [Candidatus
Solibacter usitatus Ellin6076]
Length = 509
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 228/456 (50%), Gaps = 30/456 (6%)
Query: 1 MLCNVSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 60
+L R G + G ++L L LA GA +D E++ A I + + + T+
Sbjct: 65 ILLATCRRHQNHGKFNGSIEEQLAVLDLAVRNGAHAIDVEIETA-EIAQDRLNQFRGRTQ 123
Query: 61 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 120
IVS + TP + + V ++QA I+ +D + + + L+ +V ++A
Sbjct: 124 VIVSYHNFEATPPMDTVVNRVMKVQADAYKIVSTARKPSDNVRVLAVAKALTKHRVIVLA 183
Query: 121 YSVGERGLVSQLLSPKFNGALVYGS---LKGTPVLGLPTVESLRQTYKVEHINADTKVFG 177
+GE G +++LSP F G Y + +GT G + LR Y+VE + K++G
Sbjct: 184 --MGELGFPTRVLSPVFGGVFTYAAPIYAEGTAA-GQVSARYLRHLYRVEKLGKSAKIYG 240
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYK 235
+I+ P+ HS P +HN F+ + +Y+P V L+ FFS + +GFSV P+K
Sbjct: 241 VIADPIRHSISPAVHNRAFQSRRVDAVYLPFLVAPACLRDFFSLAAKLPLSGFSVTIPHK 300
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
+ ++++ D V PLA+ I AVNT+ R+ GK G NTD + +K
Sbjct: 301 QKIIRYLDIVDPLARRIGAVNTVWRKA--GKWRGTNTDAAGVTGPLSRLLK--------- 349
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 355
++ ++ G GGA R+ A GA++ + + +R ++L S + GA +
Sbjct: 350 -----ISKASVLIVGNGGAARSAACALSDAGAKISLVGRNPDRVRAL-SKICGAESLLRE 403
Query: 356 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 415
L+ + + +ATPLGM P+ + ++ D +VFD VY P +T L++ A+ G
Sbjct: 404 QLDSRHFDAVV--HATPLGMFPHVNECFFEDKIPAD--IVFDMVYNPLETVLVQRAKEQG 459
Query: 416 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
I+V G++MF+ QA+ QF ++TG+ AP+ M + L
Sbjct: 460 KIVVPGLDMFIEQAVRQFEIWTGETAPRPVMLKAAL 495
>gi|94263740|ref|ZP_01287547.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93455840|gb|EAT06003.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 19/286 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
LAG ++ GAGG+ RA+ FG K GAR+ + E + LA+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P + + Q + L NAT +GM P D+ P+ L ++ +V D VY+P T+LL
Sbjct: 168 PWLPLAEAGDRQADA---LVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATKLL 224
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++A AAG + G++M L Q QF L+TG++AP E MRE +L+
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTGQQAPLEVMRESMLSGL 270
>gi|320106134|ref|YP_004181724.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924655|gb|ADV81730.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 706
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 214/450 (47%), Gaps = 27/450 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSC 65
R K GG + G +++E L + G VD E++ A + +G ++S
Sbjct: 81 RRKANGGDFAGSAEEQMEHLLASAKSGCQIVDMEVETAEALKATALDKLRDAGCVVMLSF 140
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-SHCQ-VPIIAYSV 123
+ TP DL + RM D K+V + + + ++ LL H + ++A ++
Sbjct: 141 HDFKGTP---DLDAVYDRMAKFSPDFYKIVPTAKSLPDNLKVTALLEKHAEDANVVALAM 197
Query: 124 GERGLVSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
G G+++++L P+F +G ++ G +L + Y+++ I A T+++G+
Sbjct: 198 GNFGVLTRILGPRFGSVFTFGAATVGEETAPGQVAARTLTELYRMDGIEASTRIYGVAGS 257
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
PV S P++ N FR N +YV + D+K G SV P K ++
Sbjct: 258 PVTSSLSPLMINTAFRRETVNAVYVALETGDVKDLLKVMEKLPIHGVSVTMPLKTDILAH 317
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
++ PL+ I A NT++R DGKL G+NTD + +E + PL
Sbjct: 318 LEKTDPLSAKIGACNTVVRA-QDGKLYGFNTDVGGIVGPLERRV--------------PL 362
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
G ++ GAGG RA FG K +GA V I + E+A+ LA GA D
Sbjct: 363 RGAKVLVLGAGGVARAAVFGLKDKGAEVSILNRTPEKAQKLARQA-GAKVMRRD--QLAK 419
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
+ ++ NATP GM P+S E L + L+FD VY P +T L++ A + +V G
Sbjct: 420 TRFDVVINATPYGMLGQKIAAPISAEEL-NTGLLFDLVYNPIETPLVRLARSKNIAVVLG 478
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VEMF++Q QF ++TGK AP+E M +VL
Sbjct: 479 VEMFVQQGARQFEIWTGKPAPQEEMLRVVL 508
>gi|322436187|ref|YP_004218399.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321163914|gb|ADW69619.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
Length = 571
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 213/449 (47%), Gaps = 29/449 (6%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCE 70
GG Y+G LE L A + G VD EL+ A + + IVS + +
Sbjct: 81 GGRYKGSAASELEILVEAANSGFQIVDLELESAEALKSAGIDKIRATSAGLIVSWHDFEK 140
Query: 71 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSVGERGL 128
TP DL + +R+ D +K+V + +T+ ++ + + + I+ +G+ G+
Sbjct: 141 TP---DLDKVYARIAPFEPDFVKIVPTAQCLTDNVKLMRFIERMSDEASIVGVCMGDSGI 197
Query: 129 VSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 186
+S++L + + ++ G +L +TY++ ++A TKV+G+ PV S
Sbjct: 198 ISRVLGVRAGSTFTFAAATVGEETAPGQILARTLLETYRIAEVDAATKVYGVAGDPVNKS 257
Query: 187 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
P++ N FR N +Y+ + D+ G S+ P+K+++M
Sbjct: 258 LSPLMMNTAFRRETVNAVYLALQATDVTDLVKLIQEIPIQGVSITMPHKQSIMAHLAHTD 317
Query: 247 PLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
PL+ I A NT++R P KL G+NTD + + ++ I+ +G K
Sbjct: 318 PLSAKIGACNTVLRVPPSAGEPAKLYGFNTDVQGILIPLQKRIELKGAKA---------- 367
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
++ GAGG+ RA F + +GA V I + E A LA E +L +
Sbjct: 368 ----LVLGAGGSARAAVFALRDKGAEVFILNRTLETAAKLAKQSGAKVIKREALLKSTFD 423
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
++ NATP+GM + ++ L+ +LVFD VY P T LLK A + G +++GV
Sbjct: 424 ---VIINATPVGMSGQSVEPILTAAELKTTKLVFDLVYNPVDTPLLKQARSLGLSVITGV 480
Query: 423 EMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
EMF++Q QF ++TGK AP++ M ++V+
Sbjct: 481 EMFVQQGARQFEIWTGKPAPEDEMLKVVI 509
>gi|94266091|ref|ZP_01289808.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93453336|gb|EAT03770.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 155/286 (54%), Gaps = 19/286 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
LAG ++ GAGG+ RA+ FG K GAR+ + E + LA+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P + + Q + L NAT +GM P D+ P+ L ++ +V D VY+P TRLL
Sbjct: 168 PWLPLAEAGDRQADA---LVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATRLL 224
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++A AAG + G++M L Q QF L+T ++AP E MRE +L+
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTDQQAPLEVMRESMLSGL 270
>gi|218779608|ref|YP_002430926.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218760992|gb|ACL03458.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
Length = 274
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 144/283 (50%), Gaps = 19/283 (6%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 227
IN+ T+++ + PV HS P +HN F H+ N Y+ V D++ + D G
Sbjct: 4 EINSLTRLYAVFGDPVAHSLSPAMHNRAFTHIGENAAYMAFRVKDVQGAVRAIRAFDMGG 63
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
SV P+K +VM+ DEV A+A+ AVNTI+ G+LIG N+DC ++ AI++
Sbjct: 64 ASVTIPHKISVMEHLDEVDETARAMGAVNTIVN--DQGRLIGKNSDCLGAVKAIQEK--- 118
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
+P+ G+ V+ GAGGA RA+ +G K GARV I + E+ LA ++
Sbjct: 119 -----------TPVKGKDVVVIGAGGAARAVIYGLKQEGARVTIVNRTMEKGAQLAEELG 167
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
+P ED+ I NAT +GM PN P L D VY P TR
Sbjct: 168 VDFQPMEDLGKLDCR---IAVNATSVGMVPNVQDSPAPASLFNKEMLAMDIVYRPLLTRF 224
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
L DA AG IV G+ MF+ Q QF +TGKEAP MRE V
Sbjct: 225 LSDARDAGCTIVDGIAMFVYQGASQFEWWTGKEAPVAQMRETV 267
>gi|451945874|ref|YP_007466469.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
gi|451905222|gb|AGF76816.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
Length = 273
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 19/280 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+ T ++G+I PV HS P +HN + + +Y+P D+ + G
Sbjct: 3 ISGTTVLYGIIGNPVTHSLSPAMHNAALAALGIDAVYLPFPASDIAAAVTGIRGLGIQGL 62
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE+VM D V P+A I AVNTI+ ++ L G NTD + A+E+ I
Sbjct: 63 SVTIPHKESVMALLDTVDPVAVKIGAVNTIVN--TEKVLTGLNTDWLGATRALEEEID-- 118
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
L+G V+ GAGG+ RA+ FG +GA + + R + LA ++
Sbjct: 119 ------------LSGAHAVILGAGGSARAIGFGLLEKGASITLCSRTESRGRRLADELHC 166
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P+ + +G +L NAT +GM P + PVSEE +Q+V D VY P KTRLL
Sbjct: 167 ---PWISLEESDRLRGDVLINATSVGMVPQIENTPVSEEVTSQFQVVMDIVYAPMKTRLL 223
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
++AEA G I++G+EM L Q + QF ++TGK+AP MR+
Sbjct: 224 REAEAGGCKIINGLEMLLYQGVAQFEIWTGKDAPVSVMRK 263
>gi|51246864|ref|YP_066748.1| shikimate 5-dehydrogenase [Desulfotalea psychrophila LSv54]
gi|50877901|emb|CAG37741.1| probable shikimate 5-dehydrogenase [Desulfotalea psychrophila
LSv54]
Length = 296
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 148/277 (53%), Gaps = 19/277 (6%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 232
T V+G+I PV HS P++HN F + + +YVP V+D++ + G SV
Sbjct: 19 TAVYGIIGNPVSHSMSPLMHNAAFESLGIDAVYVPFRVEDVESAVQGLRGLNICGVSVTI 78
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGY 290
P+KEAV+ DEV P+A I AVNTI+ DG+ L G+NTD + A++ +
Sbjct: 79 PHKEAVIPLLDEVDPVAGKIGAVNTIVSSMRDGRPFLKGFNTDWIGANRALQAVVS---- 134
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
L G+ +L GAGG+ RA+ FG GA V++ R + LA +
Sbjct: 135 ----------LKGKQVLLLGAGGSARAIGFGLLEAGAEVILCSRTPSRGRQLADEFGCLW 184
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
EDI + + + I+ NAT +GM P D ++ E L + V D VY+P +TRLL +
Sbjct: 185 LSLEDIGSVRAD---IVVNATSVGMAPQEDVSLMTVEQLSGVEAVMDIVYSPHRTRLLAN 241
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
A+ AG IVSG+EM L Q + QF L+ G+EAP MR
Sbjct: 242 ADKAGCAIVSGLEMLLYQGVQQFELWQGREAPLAVMR 278
>gi|224369347|ref|YP_002603511.1| hypothetical protein HRM2_22490 [Desulfobacterium autotrophicum
HRM2]
gi|223692064|gb|ACN15347.1| AroE1 [Desulfobacterium autotrophicum HRM2]
Length = 271
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 19/283 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
+N+DT+++ L PV HS GP++HN F+ N NG+Y+ V + ++ + AG
Sbjct: 2 LNSDTRLYALFGDPVAHSLGPVMHNAAFQKANINGVYLAFRVPRIDDAIASMKALGIAGA 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE V+ D + PLA+ + AVNTII R DG L GYNTDC ++ +E
Sbjct: 62 SVTIPHKETVIPLLDRIDPLARGMGAVNTIINR--DGMLFGYNTDCMGAVDPLEGVCD-- 117
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
L GR V+ GAGGA RA+AFG + +GA I + +R ++LA ++
Sbjct: 118 ------------LKGRRVVVLGAGGAARAVAFGIRQQGAIPFIVNRSIKRGRTLADELGA 165
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
A P DI P+ I+ NAT +GM P+ D +P+ E L+ +V D VYTP +T L+
Sbjct: 166 AFIPKADIATVDPD---IIVNATAIGMAPDNDAIPLDPEILKPGMVVMDIVYTPVRTALI 222
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
K A G ++ G+ MF+ Q QF LFTGK+AP + M+ ++L
Sbjct: 223 KAAAERGCTVIDGMAMFVNQGALQFELFTGKKAPIQTMKSVLL 265
>gi|308271588|emb|CBX28196.1| hypothetical protein N47_G35200 [uncultured Desulfobacterium sp.]
Length = 289
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 25/300 (8%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-P 223
K+ I +TK+ +I P+ HS P +HN + ++ + +YV V+D+K + +
Sbjct: 3 KLTSIGTNTKLCAVIGNPISHSLSPAIHNAGYDALDLDFVYVSFRVEDIKNALAGMRALE 62
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+F G SV P+K A++ DE+ L + I ++NT+I GKLIG TD ++ AI D
Sbjct: 63 NFRGMSVTIPHKIAIIDLVDEISDLDRNIGSINTVINEK--GKLIGLGTDGPGALKAIRD 120
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRG-ARVVIFDIDFERAKS 341
A G L G+ ++ G+GGA RA+AF A++ G ++ + DID
Sbjct: 121 A-------------GVNLEGQKVLMIGSGGAARAIAFTLAQNAGLEKLTLLDIDAAMMNK 167
Query: 342 LASDVMGAARPF-------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
LASD+ + + L+ ++ ++ + TP+GMHP D V + + Q+
Sbjct: 168 LASDLKAGTKAIIESDMLTDTSLSANMKQADLVIHCTPVGMHPKEDASLVPPQLFKPGQV 227
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+FD VYTP KT+LLK+A+ G +SGVEMF+ QA+ QF FTG +AP+E MR +V+ +
Sbjct: 228 IFDVVYTPLKTKLLKEAQMHGLKTISGVEMFINQAVLQFERFTGADAPEEVMRRVVMERL 287
>gi|94971136|ref|YP_593184.1| 3-dehydroquinate dehydratase [Candidatus Koribacter versatilis
Ellin345]
gi|94553186|gb|ABF43110.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase [Candidatus
Koribacter versatilis Ellin345]
Length = 613
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 212/444 (47%), Gaps = 27/444 (6%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 71
GG ++G +LE L A G +D EL+ A ++ + + I+S + T
Sbjct: 84 GGKFKGSASAQLEILAKAAAAGCQLLDVELETAESVKASELQKLREAASIILSFHDFKAT 143
Query: 72 PSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 131
+D+ + ++ ++ S+ D ++ + + H +I +GE+G++S+
Sbjct: 144 KKLDDILARMVKIHVEYYKVVSTATSLYDNVQMMKFLEKHGH-DYWLIGLCMGEQGIISR 202
Query: 132 LLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 189
+LS + + + G T LR T++++H++A T V+G+ PV HS P
Sbjct: 203 VLSVRAGSVFTFAAASAGEETAPGQVTYRDLRSTFRIDHVDAATHVYGVAGDPVAHSLSP 262
Query: 190 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 249
+ N FR N NG+Y+ + + G S+ P+KE ++K L
Sbjct: 263 AMMNLAFRRENVNGVYLALHTKKTDDLMACIRDIPLRGLSITMPHKEEMVKHLANTDDLV 322
Query: 250 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 309
+ I AVNTI+ R DGKL G+NTD + + D I G K ++
Sbjct: 323 RKIGAVNTIV-RAQDGKLYGFNTDVAGIVGPLSDRITVTGAK--------------ILVV 367
Query: 310 GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI--LNFQPEKGAIL 367
GAGGA RA FG +RGA + I + +A+ LA + D+ L+F ++
Sbjct: 368 GAGGAARAAVFGLAARGAHISIVNRTVPKAQKLAKEAGAKVVKRADLKKLDFD-----VI 422
Query: 368 ANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLR 427
NAT +GM N P+ + LR ++VFD VY P TRL++ A+A G + G EMF++
Sbjct: 423 INATSVGMM-NPKVSPLEADELR-ARIVFDMVYNPVNTRLIQLAKAKGLATIPGYEMFVQ 480
Query: 428 QAIGQFNLFTGKEAPKEFMREIVL 451
Q QF +++GK AP E MR IV+
Sbjct: 481 QGARQFEIWSGKPAPVEEMRGIVM 504
>gi|262181533|gb|ACY29657.1| 3-dehydroquinate dehydratase 02 [Vitis vinifera]
Length = 187
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 31 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 90
+LGADYVD ELKVA + + + IVS + TPS EDLG LV +QATGAD
Sbjct: 2 ELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGAD 61
Query: 91 IIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTP 150
I+K+ + +IT++ARIFQ+ H QVP+I +GERGL+S++L PKF+G L +GSL+
Sbjct: 62 IVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGI 121
Query: 151 VL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM 208
V G PT++ L Y + DTKVFG+I KPV HSK P L+N F+ V +NG+YV +
Sbjct: 122 VSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHL 181
Query: 209 FVDDL 213
VDD+
Sbjct: 182 LVDDI 186
>gi|225873819|ref|YP_002755278.1| 3-dehydroquinate dehydratase [Acidobacterium capsulatum ATCC 51196]
gi|225794474|gb|ACO34564.1| 3-dehydroquinate dehydratase, type I domain/shikimate
5-dehydrogenase domain protein [Acidobacterium
capsulatum ATCC 51196]
Length = 800
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 218/447 (48%), Gaps = 28/447 (6%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-GTRFIVSCNLDCE 70
GG ++G ++ L A G D +D E++ A + + + +S G I+S + +
Sbjct: 142 GGKFKGSIEAEIQILEKAIAAGCDLIDIEIETAEKLKAAELARIRSLGAALIISYH---D 198
Query: 71 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ--VPIIAYSVGERGL 128
+ DL + ++Q D +K+V + + + + L ++ +GE+GL
Sbjct: 199 FKATRDLDRMFEKIQRYSPDFVKMVSTATCLADNLAMMHFLERSSDAANVVGICMGEQGL 258
Query: 129 VSQLLSPKFNGALVYGSLKGTPVLGLPTV--ESLRQTYKVEHINADTKVFGLISKPVGHS 186
+S++L + + S + G + +L + ++++ ++ T+V+G++ PV HS
Sbjct: 259 ISRVLGVRAGSVFTFASAQAGEETGPGQIAARTLHEIFRIDQVSPATRVYGVVGNPVMHS 318
Query: 187 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
P++HN FR N +++P+ + L G +V P+K ++K
Sbjct: 319 LSPLIHNLAFRRETVNAVFLPLQANTLSDVLRLVKEVPLHGLAVTMPFKGEILKHLTNTD 378
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 306
L++ I A NT++ R DG L G+NTD A + +E + PL
Sbjct: 379 ALSEKIGACNTVV-RALDGNLYGFNTDVAAVVRPLERRL--------------PLRDARV 423
Query: 307 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAI 366
++ GAGGA RA FG K +GA V I + E A+ LA +E + + +
Sbjct: 424 LVIGAGGAARAAVFGLKDKGADVTIVNRTPETAQKLARQAKARTIRYEQLAKASFD---V 480
Query: 367 LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 426
+ NATP+GMH + + + + L + +LVFD VY P +T LL+ A G +++GVEMF+
Sbjct: 481 ILNATPIGMHGHKQQSWLKPDQL-NARLVFDMVYNPIETPLLRMAREKGLPVITGVEMFV 539
Query: 427 RQAIGQFNLFTGKEAPK-EFMREIVLA 452
+Q QF ++TGK AP+ E +R +V A
Sbjct: 540 QQGARQFEIWTGKPAPEDEMLRAVVHA 566
>gi|390986545|gb|AFM35792.1| hypothetical protein, partial [Oryza eichingeri]
Length = 156
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 132 LLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 189
+L PKF G L +GSL KG PT L Y + I DTKV+G+I KPVGHSK P
Sbjct: 1 VLCPKFGGFLTFGSLEKGKESAPAQPTATDLINVYNIRQIGPDTKVYGIIGKPVGHSKSP 60
Query: 190 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 249
ILHN FR V N +YVP VDDL F +TYSS +FAGFS P+KEA ++ CDEV P+A
Sbjct: 61 ILHNEAFRSVGLNAVYVPFLVDDLSNFLNTYSSTEFAGFSCTIPHKEAAVRCCDEVDPIA 120
Query: 250 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+
Sbjct: 121 KDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIR 156
>gi|255291825|dbj|BAH89264.1| putative 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
fragment [Diospyros kaki]
Length = 188
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 117 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHINADTK 174
P I ++GERGL+S++L KF G L +G+L+ G PT+ L Y I DTK
Sbjct: 1 PTIGLAMGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIGPDTK 60
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 234
V G+I P+GHSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+
Sbjct: 61 VHGVIGNPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPH 120
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
K A ++ CDEV P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + +
Sbjct: 121 KMAGLECCDEVDPIAKAIGAISCVIKKPSDGKLIGYNVDYLGAIAAIEEGLGGS--SSAS 178
Query: 295 ASFGSPLAGR 304
SPLAGR
Sbjct: 179 NGSVSPLAGR 188
>gi|242085730|ref|XP_002443290.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
gi|241943983|gb|EES17128.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
Length = 164
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 125 ERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
E+G +S++L K+ G L + SL KG G PTV L YK+ I DTKVFG+I P
Sbjct: 3 EQGFISRILCAKYGGYLTFASLEKGKESAPGQPTVSDLINKYKIRQIGPDTKVFGIIGNP 62
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
V HSK PI+ N FR V ++ +++P DDL +F ST+S+PD+AGFS P+KE ++ C
Sbjct: 63 VNHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVEFLSTFSAPDYAGFSCTMPHKETALRCC 122
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
D+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+AIED +
Sbjct: 123 DDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIEDGL 164
>gi|228993077|ref|ZP_04153000.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228999127|ref|ZP_04158709.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228760744|gb|EEM09708.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228766725|gb|EEM15365.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 277
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 161/289 (55%), Gaps = 24/289 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + E+A L S A
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQ--A 166
Query: 351 RPFEDILNFQP---EKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ L+ + E+G I+ + T +GMHP+ P+ +L+ +V D +Y P +T
Sbjct: 167 KITSQALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFET 226
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+LL+DA+A GAI+ +G++MF+ Q F L+TG+ E M+++V+ K
Sbjct: 227 KLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|229006675|ref|ZP_04164309.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228754536|gb|EEM03947.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 277
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 24/289 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F ++N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEYLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + E+A L S A
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQ--A 166
Query: 351 RPFEDILNFQP---EKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ L+ + E+G I+ + T +GMHP+ P+ ++L+ +V D +Y P +T
Sbjct: 167 KITSQALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIQSLKQGTIVSDIIYNPFET 226
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+LL+DA+A GAI+ +G++MF+ Q F L+TG+ E M+++V+ K
Sbjct: 227 KLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|307109521|gb|EFN57759.1| hypothetical protein CHLNCDRAFT_143054 [Chlorella variabilis]
Length = 375
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP W GG Y+G E +RL AL LA GA YVD ELKVA + +G IVS +
Sbjct: 82 RPTWEGGKYDGPEPQRLAALRLAALSGAAYVDVELKVAPAFFAG--TQPWAGGAVIVSSH 139
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
T SEE+L LV R GADI+K NDIT+ R+ +L C VP IA ++GER
Sbjct: 140 DYERTASEEELMALVERCHGAGADIVKFATMANDITDAHRVLSVLRRCPVPCIALAMGER 199
Query: 127 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S+LL+PK+ G L +G+L G PT++ L Y ++ DT V G++ PV
Sbjct: 200 GQISRLLAPKYGGFLTFGALSPDRASAPGQPTLQQLSGMYGLKQQRRDTAVLGIVGNPVS 259
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 224
HS+ P +HN R NG+YVP+ VDD+ F +T++ D
Sbjct: 260 HSRSPAIHNAALRQAGLNGVYVPLLVDDMPSFLATFTGED 299
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 48/72 (66%)
Query: 380 DRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
D PV L Y+LVFDAVYTP TRLL+DA AG +V+G MF+ QA QF LFTG
Sbjct: 299 DETPVPATALGGYRLVFDAVYTPLHTRLLRDAATAGCAVVTGDTMFVGQAADQFRLFTGV 358
Query: 440 EAPKEFMREIVL 451
EAP E MR +VL
Sbjct: 359 EAPVELMRSVVL 370
>gi|20093557|ref|NP_613404.1| shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
gi|24211502|sp|Q8TZ24.1|AROE_METKA RecName: Full=Shikimate dehydrogenase
gi|19886404|gb|AAM01334.1| Shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
Length = 290
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 29/296 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 226
++A+T V GLI PV HS P +HN F+ + N +Y+ V + + + D
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAVM+ CDE+ A+ I AVNT+ R S GK+ G+NTD E + A+ +
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRAL----R 120
Query: 287 ERGY--KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLA 343
E Y GT S V+ GAGGA RA++F + GA +VI + +RA+ LA
Sbjct: 121 EETYFDPRGTKS----------VILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLA 170
Query: 344 SD----VMGAARPFE---DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLV 395
+ V AR D + + +L +ATP+GM+PN D P V+ + + + +V
Sbjct: 171 EELKEKVGVKARAIGLDGDEIERELRDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIV 230
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D VY P +TRLL++AE AGA VSGV M + Q F L+TG+EAP E MRE VL
Sbjct: 231 NDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVL 286
>gi|297568001|ref|YP_003689345.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
gi|296923916|gb|ADH84726.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
Length = 270
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 152/286 (53%), Gaps = 19/286 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+ T+V+G+I PV HS+ P +HN F N +YVP+ D + + AG
Sbjct: 4 IDGSTEVYGIIGNPVRHSRSPAMHNAAFAACGLNKVYVPLPALDGAAAVAAIRTLGIAGA 63
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE V++ D+V P+A I AVNTI+RR + L G NTD + A+ +A++
Sbjct: 64 SVTIPHKETVIEQLDKVDPVAARIGAVNTIVRRGDE--LHGANTDWLGANQALGEALE-- 119
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
LAG +L GAGG+ RA+ FG + GA+V++ ER + LA +
Sbjct: 120 ------------LAGAKVLLLGAGGSARAIGFGLREAGAKVILASRTPERGQELAQQL-- 165
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P+ + + L NAT +GM P ++ P+ L + +V D VY+P +TRLL
Sbjct: 166 -DCPWVPLEQAAEQAANALVNATSVGMAPLAEQSPLPAAALAAFPVVMDIVYSPLQTRLL 224
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++AEAAG + G+ M L Q QF ++T +EAP MR+ +L
Sbjct: 225 REAEAAGCHCIDGLAMLLYQGAAQFTMWTNQEAPLAIMRQTLLENL 270
>gi|338733093|ref|YP_004671566.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Simkania negevensis Z]
gi|336482476|emb|CCB89075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Simkania negevensis Z]
Length = 493
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 213/442 (48%), Gaps = 34/442 (7%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG ++G E +R L L DYVD E V + K HQS + C+
Sbjct: 56 RKKAQGGEFQGSEQEREAKLLELLTLKPDYVDLEFDVDPSFAKK---VHQSFPDVAIICS 112
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
+ ++L ++++M A I K+ N + R+ + + + + S+
Sbjct: 113 YHDFDKTPDNLENVLTQMTQMRASIYKIATFANSSLDSLRMLSFILQKRREGISLAGMSM 172
Query: 124 GERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 179
G G ++++L+P + L Y SL K P G V++L + Y+ +N TKV+ LI
Sbjct: 173 GPHGDITRILAPIVDSLLTYTSLSSEEKTAP--GQVPVDTLEKIYRFSTLNQQTKVYALI 230
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEA 237
PV S G HN F+ + N +YV + V +++ FF + F GFSV P KE
Sbjct: 231 GDPVEQSIGHFAHNTLFKKLKENAVYVKILVRSEEVGPFFQLLKTLPFHGFSVTMPLKEK 290
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
V + D ++P A+ I A+NT+ ++G+ G+NTD ++ AIE+
Sbjct: 291 VGEHLDHINPQAKKIGAINTL--NLNEGRWEGFNTDASGALDAIEEK------------- 335
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 357
+AG+ V+ GAGGA RALA+ RG V+I + E+AK LA + E
Sbjct: 336 -RQVAGKKVVILGAGGAARALAYETIERGGEVLIVNRTEEKAKKLARQLGCEGVALE--- 391
Query: 358 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 417
+ IL N TP+GM + +SE+ L +VFDA+ P++T LL A+ G
Sbjct: 392 RWTKPSYDILMNTTPVGMTTKGLSL-ISEKALLKNAVVFDAIMYPKETPLLILAKNKGCQ 450
Query: 418 IVSGVEMFLRQAIGQFNLFTGK 439
IV G EMF RQA+ Q ++ +
Sbjct: 451 IVYGNEMFTRQAVKQAEIWLNR 472
>gi|374313118|ref|YP_005059548.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358755128|gb|AEU38518.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 592
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 211/455 (46%), Gaps = 35/455 (7%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSC 65
R K GG +EG L+ L A + G VD EL+ + ++G I+S
Sbjct: 79 RCKENGGRFEGSNTGALDVLLKAAESGFQLVDIELEAIEKLPKTTMDRLREAGAAVIISH 138
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 121
+ + +DL + +R++ D IK+V + +++ + + L + I+
Sbjct: 139 H---DFHGTKDLDAVYNRIEPFAPDFIKVVPTAKSLSDNLTLMRFLERMEDRSKSSIVGI 195
Query: 122 SVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLI 179
+GE G++S++L + A + + G +L + Y+++ ++A TKV+G+
Sbjct: 196 CMGEAGIISRVLGLRAGSAFTFAAANAGEETAPGQIAARTLIEDYRIDQVDAATKVYGVA 255
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
P+ S P++ N FR N +Y+ + + F G SV P KEA+M
Sbjct: 256 GNPIRSSLSPLMMNTAFRRETVNAVYLALQATKVDDLFKLVREIPIQGLSVTMPLKEAIM 315
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
+ PL+ I AVNT++ R DGK G+NTD + +E + +G K
Sbjct: 316 PLLERTDPLSAKIGAVNTVL-RAQDGKFYGFNTDVAGIVGPLERRLSLKGAK-------- 366
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI--- 356
+ VL G A A+ FG + +GA V I + E A+ LA GA D
Sbjct: 367 -----VLVLGAGGAARAAV-FGCRDKGAEVWILNRTPETAQKLARQA-GAKTIKRDAVAK 419
Query: 357 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 416
+ F ++ NATP+GM P+ + ++VFD VY P +T LL+ A G
Sbjct: 420 MGFD-----VIINATPVGMT-GQKAAPLLQPEDLVARIVFDLVYNPIETPLLRLARQKGL 473
Query: 417 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+SGVEMF++Q QF ++TGK AP+E M +VL
Sbjct: 474 TAISGVEMFVQQGARQFEIWTGKPAPEEEMLRVVL 508
>gi|339500912|ref|YP_004698947.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
gi|338835261|gb|AEJ20439.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
Length = 498
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 44/390 (11%)
Query: 74 EEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQL 132
+E+L + ++ TG +I K+ ++ ++AR+F++ + + I ++G G+ +++
Sbjct: 131 DENLEQKLRSLRRTGDEIAKVAVMPHNYDDVARLFKVADSTKDMEKILIAMGPHGVSTRI 190
Query: 133 LSPKFNGALVYGSLKGTPVLGLPT-------------VESLRQTYKVEHINADTKVFGLI 179
L+ + L + S P+ + + +L TY+ +N TKV+G+I
Sbjct: 191 LAERLGSHLSFTS----PIAEIESDSEIQVAGPGQLDPRTLVDTYRFRSLNHKTKVYGII 246
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
P+ + P +HN + + N +Y+P V DL FF+ + + G SV P+KEAV+
Sbjct: 247 GYPLSATASPQIHNEGYSRLKMNAVYIPFPVQDLSSFFNLAETLNIQGLSVTIPHKEAVL 306
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF-G 298
+C + P I + NT++R P YNTD + G+ + F G
Sbjct: 307 TYCSQRSPEVDRIGSCNTLVRAPQGWA--AYNTDAQ-------------GFSDSLLEFIG 351
Query: 299 SP-LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-----ARP 352
P L + + GAGG +A+A R ++ + RAK +A + A AR
Sbjct: 352 KPNLLFKRVTIIGAGGVAKAVASEIHRLKGRALVLNRTPLRAKEIAEPLNFAWAGLDARG 411
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
E I +++ I+ T +GM PN D P+ R ++V D +Y P +T+LLK A
Sbjct: 412 IELIDHYRD----IIIQTTSVGMEPNIDEDPIELYKFRGKEVVMDLIYKPEETKLLKRAA 467
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
AG ++G +M LRQA QF+LFTG+E P
Sbjct: 468 KAGCKTLNGYDMLLRQAKLQFSLFTGQEYP 497
>gi|406996985|gb|EKE15179.1| hypothetical protein ACD_12C00117G0002 [uncultured bacterium]
Length = 273
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 28/292 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV----PMFVDDLKKFFSTYSSPD 224
I+A TK+ +I PV HS P +HN + + +V + + D+ +
Sbjct: 3 ISAKTKICLIIGDPVTHSLSPAMHNAGYEALGIEDKFVFLGANVNIKDVGVTIQSMRKMG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G + P+K VMK DE+ A+ I AVNT++ + +GKLIG+NTD ++ +E
Sbjct: 63 IHGLTCTIPHKIEVMKLLDEIDDTAKMIGAVNTVLNQ--NGKLIGFNTDWLGAVIPLEKI 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 344
+ L+ + ++ GAGGA RA+ FG R A V IF+ E+A LA
Sbjct: 121 --------------TTLSEKKVLVLGAGGAARAVIFGMLKRKAMVTIFNRTKEKATKLAK 166
Query: 345 DV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ M + +I NF I+ N T +GM P D+ P+S + + + Q+VFD VY
Sbjct: 167 EFNCQMTDLKIESEIKNFD-----IIINTTSVGMKPLEDKTPISIKFITNKQIVFDIVYV 221
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
P +T+LL++A+ GA I+ G EM L Q QF ++TG +AP+E MR I++ K
Sbjct: 222 PFETKLLREAKKRGAKIIHGTEMLLHQGTAQFEIYTGHKAPEEVMRRILINK 273
>gi|374315064|ref|YP_005061492.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350708|gb|AEV28482.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
Length = 497
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 182/374 (48%), Gaps = 23/374 (6%)
Query: 81 VSRMQATGADIIKLVF---SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKF 137
+S++ A G DI K+ S+ D+ + R+ Q L + II +G+ G+ +++L K
Sbjct: 142 ISKLAAKG-DIPKIAVTPKSMIDVISLFRVQQELQGIKDKIII-GMGDFGIPTRILYKKC 199
Query: 138 NGALVY--GSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPT 195
L + S + P G + +++ + Y+ + ++ T ++G+I PV H+ P++HNP
Sbjct: 200 GSMLTFCTDSSEKVPAPGQLSAQTMSELYRSDKLDDRTHIYGIIGNPVYHTSSPLIHNPG 259
Query: 196 FRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 255
F ++YN +YVP VD ++ FF GFSV P+K V + + + I A
Sbjct: 260 FLAIHYNAVYVPFLVDSVRAFFKLAEMLQIHGFSVTVPHKRDVQPYLGRITREVKQIGAC 319
Query: 256 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 315
NT+ R + K G NTD + I + + + GT ++ GAGGA
Sbjct: 320 NTVTRIQNMWK--GTNTDYYGFLAPIAEEVSK-----GTIHSA--------LVIGAGGAS 364
Query: 316 RALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGM 375
RA+ + + G +V + + + AKS+AS+ M + E+ + K ++ T +GM
Sbjct: 365 RAVIWALHNHGVKVTVINRSLDHAKSIASETMSSYDSLENCSRYSG-KVDLVVQTTSVGM 423
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
PN PV +LV++ +Y PR+T LK A AAG +V G +M + Q QF
Sbjct: 424 TPNDTEDPVPALRFLGNELVYELIYHPRETVFLKRAIAAGCTVVQGRDMLMEQGKLQFEA 483
Query: 436 FTGKEAPKEFMREI 449
FTG P E+
Sbjct: 484 FTGYHYPHWIHPEL 497
>gi|423650199|ref|ZP_17625769.1| shikimate dehydrogenase [Bacillus cereus VD169]
gi|401282617|gb|EJR88516.1| shikimate dehydrogenase [Bacillus cereus VD169]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|30022412|ref|NP_834043.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206969455|ref|ZP_03230409.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218234390|ref|YP_002369144.1| shikimate 5-dehydrogenase [Bacillus cereus B4264]
gi|228960604|ref|ZP_04122251.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048041|ref|ZP_04193616.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|229111808|ref|ZP_04241354.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|229129615|ref|ZP_04258583.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229146906|ref|ZP_04275270.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|229152538|ref|ZP_04280728.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|229180612|ref|ZP_04307953.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|296504827|ref|YP_003666527.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|365158876|ref|ZP_09355066.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411869|ref|ZP_17388989.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|423432345|ref|ZP_17409349.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|423631057|ref|ZP_17606804.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|423640585|ref|ZP_17616203.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|423657290|ref|ZP_17632589.1| shikimate dehydrogenase [Bacillus cereus VD200]
gi|81580465|sp|Q818D0.1|AROE_BACCR RecName: Full=Shikimate dehydrogenase
gi|226724116|sp|B7HCW1.1|AROE_BACC4 RecName: Full=Shikimate dehydrogenase
gi|29897970|gb|AAP11244.1| Shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206735143|gb|EDZ52311.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218162347|gb|ACK62339.1| shikimate dehydrogenase [Bacillus cereus B4264]
gi|228602855|gb|EEK60335.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|228630904|gb|EEK87543.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|228636505|gb|EEK92971.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228653732|gb|EEL09602.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228671564|gb|EEL26862.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|228723285|gb|EEL74655.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|228799083|gb|EEM46053.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296325879|gb|ADH08807.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|363626246|gb|EHL77243.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103937|gb|EJQ11914.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|401117101|gb|EJQ24939.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|401264424|gb|EJR70536.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|401279646|gb|EJR85568.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|401290033|gb|EJR95737.1| shikimate dehydrogenase [Bacillus cereus VD200]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423512448|ref|ZP_17488979.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
gi|402449419|gb|EJV81256.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
Length = 277
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL R +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQERRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|220928114|ref|YP_002505023.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
gi|219998442|gb|ACL75043.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
Length = 294
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 25/290 (8%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 223
+E +N T+++G++ PV H+K P +HN F+ N IY+P+ VD L++ + +
Sbjct: 4 IEVVNGKTQLYGVLGNPVQHTKSPFIHNTLFKEFEINAIYLPIHVDKGKLEQVMDGFRAI 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
F+GF+V P+K+ ++ DEV + + A+NT+I + DG+ IGYNTD E +
Sbjct: 64 KFSGFNVTVPFKKDIINHLDEVSAEGKLMGAINTVINK--DGRFIGYNTDAEGFV----- 116
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 342
R + +G F + G+ +L GAGG RA+A S G + I + A+S+
Sbjct: 117 ----RDFSDG---FETTFKGKRVMLLGAGGTSRAIAVRLASEGIEHLTIVNRTEANAQSI 169
Query: 343 AS-------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 394
++ D++ P ++IL+ + E I+ N TP GM D P + QL
Sbjct: 170 SNLVNSNFGDIVSTILPEKEILDRELENNHIIVNTTPAGMSTYLDSTPFDLDFNFNGTQL 229
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V+D +Y P+KTR L+ AE G I +G M + Q + F ++TG + +E
Sbjct: 230 VYDVLYVPKKTRFLEQAEKTGCKIRNGFGMLINQGVSAFEIWTGMQVGRE 279
>gi|423585186|ref|ZP_17561273.1| shikimate dehydrogenase [Bacillus cereus VD045]
gi|401233829|gb|EJR40315.1| shikimate dehydrogenase [Bacillus cereus VD045]
Length = 277
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRMPNIERMKQLVIEKL 275
>gi|315230187|ref|YP_004070623.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
gi|315183215|gb|ADT83400.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
Length = 272
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 147/279 (52%), Gaps = 19/279 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
INA T+++GLI KPV HS P++HN F+ N N +Y+ VDDL+ + +G
Sbjct: 2 INAKTRLYGLIGKPVEHSLSPVIHNALFKRYNINAVYLAFDVDDLESAVKGVKALGISGL 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
+V PYKE +++F DE+ A+AI +VNT++ R +GKLIGYNTD ++ A++ +
Sbjct: 62 NVTMPYKEQILEFLDELSEEARAIGSVNTVVNR--EGKLIGYNTDGIGALKALKRFTEVE 119
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G + G + L SR A+VV+ + +AK L +
Sbjct: 120 GKRVLLLGAGGAGKAIAYTL---------------SRLAKVVVLNRTERKAKELEKFGVK 164
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
+ ++ L I+ NAT LGM N DR P+ + LR+ +VFD VY+P +T LL
Sbjct: 165 GGKLSKENLKRYLSWADIVINATSLGM--NEDRSPIPKGLLRENLVVFDIVYSPLETNLL 222
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
++A G + + G+ M + Q F L+TG + EFMR
Sbjct: 223 REAREVGCLTIDGLWMLIHQGAESFRLWTGVKPDVEFMR 261
>gi|423417741|ref|ZP_17394830.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
gi|401106912|gb|EJQ14869.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
Length = 277
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 158/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 346
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|163942090|ref|YP_001646974.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
gi|226697482|sp|A9VHW1.1|AROE_BACWK RecName: Full=Shikimate dehydrogenase
gi|163864287|gb|ABY45346.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
Length = 277
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y+ V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|228954621|ref|ZP_04116645.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229192547|ref|ZP_04319508.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|423426468|ref|ZP_17403499.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|423502980|ref|ZP_17479572.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449091298|ref|YP_007423739.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228590854|gb|EEK48712.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228805067|gb|EEM51662.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401111215|gb|EJQ19114.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|402459201|gb|EJV90938.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449025055|gb|AGE80218.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 277
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423612545|ref|ZP_17588406.1| shikimate dehydrogenase [Bacillus cereus VD107]
gi|401246134|gb|EJR52486.1| shikimate dehydrogenase [Bacillus cereus VD107]
Length = 277
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTVDKAENLIAGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ K
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMRKL 275
>gi|229081598|ref|ZP_04214094.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
gi|228701704|gb|EEL54194.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
Length = 277
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-----ERAKSL---- 342
PL G+ +L G+GGA RA+ F G + DID +AK L
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVK----DIDVANRTVNKAKELIAAR 164
Query: 343 ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
+DV A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P
Sbjct: 165 TADVNSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T++L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 224 FQTKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|251798006|ref|YP_003012737.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
gi|247545632|gb|ACT02651.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
Length = 293
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 26/305 (8%)
Query: 156 TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDL 213
TV +L I++ T ++G+I PV HSK PI+ N FR NG Y+ + D L
Sbjct: 2 TVSALDNGITGNRIDSQTVLYGVIGDPVRHSKSPIMMNRAFRETGINGAYMAFHISPDKL 61
Query: 214 KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 273
+F + + G +V P+K +MK+ DE+ AQAI AVNTI+ +G+L GYNTD
Sbjct: 62 GEFVAGIRAMGIRGVNVTIPHKLDIMKYMDEIDAGAQAIGAVNTIVN--DNGRLTGYNTD 119
Query: 274 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIF 332
+ ++++ + LAG+ ++ GAGGA R + + A + + + I
Sbjct: 120 GIGYVRSLKEEAEPE------------LAGKRILVIGAGGASRGIVYALAGEQPSGITIA 167
Query: 333 DIDFERAKSLA------SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 386
+ ERA+ LA +D+ A D L ++ I+ N T +GMHPNTD P+
Sbjct: 168 NRSVERAEELAQSFRSLADIRAIA---NDGLQAACKEADIVINTTSVGMHPNTDATPIDA 224
Query: 387 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
L+ + D +Y P +T+ L DAE G + G+ MF+ Q F +TG++AP M
Sbjct: 225 AWLKPGAVASDLIYNPLRTKFLLDAERHGCRVHGGLGMFIYQGAYAFEYWTGQQAPAAAM 284
Query: 447 REIVL 451
RE VL
Sbjct: 285 RETVL 289
>gi|423673876|ref|ZP_17648815.1| shikimate dehydrogenase [Bacillus cereus VDM062]
gi|401310242|gb|EJS15567.1| shikimate dehydrogenase [Bacillus cereus VDM062]
Length = 277
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYYAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229071841|ref|ZP_04205054.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|423437780|ref|ZP_17414761.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
gi|228711271|gb|EEL63233.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|401120935|gb|EJQ28731.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
Length = 277
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + +AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|229013555|ref|ZP_04170688.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|229062033|ref|ZP_04199358.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|229169082|ref|ZP_04296797.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|423519034|ref|ZP_17495515.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|423591670|ref|ZP_17567701.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|423598349|ref|ZP_17574349.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|423660821|ref|ZP_17635990.1| shikimate dehydrogenase [Bacillus cereus VDM022]
gi|423669920|ref|ZP_17644949.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|228614310|gb|EEK71420.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|228717185|gb|EEL68860.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|228747715|gb|EEL97585.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|401160089|gb|EJQ67468.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|401231803|gb|EJR38305.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|401236619|gb|EJR43076.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|401299047|gb|EJS04647.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|401300862|gb|EJS06451.1| shikimate dehydrogenase [Bacillus cereus VDM022]
Length = 277
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|320352426|ref|YP_004193765.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
gi|320120928|gb|ADW16474.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
IN T++FG+I PV HS P +HN F H+ NG+Y+PM DL F S F G
Sbjct: 2 INGQTQLFGIIGNPVEHSLSPAMHNAAFAHLGLNGVYIPMRPADLGDGFRGLKSLGFVGV 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDG--KLIGYNTDCEASITAIEDAI 285
SV P+K AVM + DEV P+A+ I AVNT++ RR DG + +GYNTD S A+ +A+
Sbjct: 62 SVTVPFKVAVMDYIDEVDPVARKIGAVNTLLFRRDQDGQNRCLGYNTDWLGSNQALAEAL 121
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 345
LA ++ GAGGA RA+ FG GARV++ + + + LA
Sbjct: 122 D--------------LATSTVLIIGAGGAARAVGFGLIEAGARVLVTNRTESKGRDLARQ 167
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ PF + L N T +GM P + VP+ L + +V D VY P T
Sbjct: 168 LNC---PFLSAHELPTAQADALINTTSVGMAPKKEAVPIDPALLARFPVVMDIVYAPLST 224
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
RLL +A+ G + G++M Q QF L+TG+EAP MR+ +L +
Sbjct: 225 RLLVEAKQRGCRTIDGLKMLQYQGAAQFILWTGREAPHAVMRQALLEEL 273
>gi|423463981|ref|ZP_17440749.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
gi|402420248|gb|EJV52519.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
Length = 276
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 232
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKTLGISGFNVTT 62
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 347
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKI 227
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|229117832|ref|ZP_04247196.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|423377808|ref|ZP_17355092.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
gi|423547637|ref|ZP_17523995.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|423622578|ref|ZP_17598356.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|228665629|gb|EEL21107.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|401179358|gb|EJQ86531.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|401260698|gb|EJR66866.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|401636074|gb|EJS53828.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
Length = 276
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 232
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 347
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEATIVSDIIYNPFETKI 227
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|423395366|ref|ZP_17372567.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
gi|401654777|gb|EJS72316.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
Length = 277
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQAVSSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
PL G+ +L GAGGA RA+ F A V + +ID R A +++ A
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSL----ADVGVEEIDVANRTVDKAKELIAAC 164
Query: 351 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
++ + EK I+ T +GMHP+ + P+ +L+ +V D +Y P
Sbjct: 165 TANDNSVALSLEKATEEQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPF 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+TR+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETRILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|423489518|ref|ZP_17466200.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
gi|423495241|ref|ZP_17471885.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|423497965|ref|ZP_17474582.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|401151334|gb|EJQ58786.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|401161252|gb|EJQ68619.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|402431754|gb|EJV63818.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
Length = 278
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 21/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSV 230
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEEALGEAVKGLKALGISGFNV 62
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TTPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE--- 116
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGA 349
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 117 --------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMAN 168
Query: 350 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 VNSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 228
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 276
>gi|423527807|ref|ZP_17504252.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
gi|402451470|gb|EJV83289.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
Length = 277
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|206976069|ref|ZP_03236979.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217961824|ref|YP_002340394.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|222097779|ref|YP_002531836.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|229141072|ref|ZP_04269614.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|375286341|ref|YP_005106780.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|423354827|ref|ZP_17332452.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|423373787|ref|ZP_17351126.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|423570574|ref|ZP_17546819.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
gi|226726289|sp|B7HPN3.1|AROE_BACC7 RecName: Full=Shikimate dehydrogenase
gi|254806732|sp|B9IYA1.1|AROE_BACCQ RecName: Full=Shikimate dehydrogenase
gi|206745821|gb|EDZ57218.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217067575|gb|ACJ81825.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|221241837|gb|ACM14547.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|228642350|gb|EEK98639.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|358354868|dbj|BAL20040.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|401085831|gb|EJP94065.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|401095188|gb|EJQ03248.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|401203770|gb|EJR10605.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
Length = 277
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|229135160|ref|ZP_04263960.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228648288|gb|EEL04323.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 277
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229076009|ref|ZP_04208982.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|229098806|ref|ZP_04229744.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|229104966|ref|ZP_04235622.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|407706862|ref|YP_006830447.1| stage IV sporulation protein FB [Bacillus thuringiensis MC28]
gi|423440916|ref|ZP_17417822.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|423448916|ref|ZP_17425795.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|423533344|ref|ZP_17509762.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
gi|423541401|ref|ZP_17517792.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|423615324|ref|ZP_17591158.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|228678460|gb|EEL32681.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|228684650|gb|EEL38590.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|228707121|gb|EEL59321.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|401129510|gb|EJQ37193.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|401172589|gb|EJQ79810.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|401261003|gb|EJR67170.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|402417577|gb|EJV49877.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|402463563|gb|EJV95263.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
Length = 276
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 232
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 347
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKI 227
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|229157949|ref|ZP_04286021.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228625509|gb|EEK82264.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 277
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|228987587|ref|ZP_04147703.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772128|gb|EEM20578.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIAPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|347755767|ref|YP_004863331.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588285|gb|AEP12815.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
Length = 514
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 205/461 (44%), Gaps = 45/461 (9%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RP+ GG + RL H A A+ D E + + +L H R +VS +
Sbjct: 63 RPREQGGFRDLSHADRLRFWHSALTTPAEAFDLETDLIAQLLPTYPPDHPVWARVVVSHH 122
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---------QVP 117
TP+ D+ A +KL VN ++ R+F L+ ++P
Sbjct: 123 DFQATPA--DIHAFALAHFPPHAGTVKLAVKVNQPDDVCRLFDWLTGTPSATPSTWQKIP 180
Query: 118 IIAYSVGERGLVSQLLSPKFNGALVYGS-LKGTPVL-GLPTVESLRQTYKVEHINADTKV 175
+ +G G+++++L P + Y + G V G T LR+T+++ ++ T V
Sbjct: 181 V---GMGGLGVLTRILGPAYGARWTYSTGHDGRAVAPGQLTATELRETFRLSSLDRHTIV 237
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP-------DFA 226
GL+ PV HS LHN F H+ N +Y+P+ V DDL F P
Sbjct: 238 AGLLGCPVAHSLSKDLHNAAFAHLGLNWVYIPVEVSPDDLAPFLRDAIHPRTRRLPWTVG 297
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G+SV P+K A++ + D + A + AVNTI+ S +LIG NTD ++
Sbjct: 298 GYSVTLPHKVAILPYLDRLTATAARVGAVNTILV--SGQELIGDNTDVAGAM-------- 347
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
R + A G P+A + GAGGA +A+ G + GA+V +F RA+ L +
Sbjct: 348 -RPLQQRFAVEGEPVA-----VLGAGGAAQAVVCGLVAAGAQVTVFARHPARAQDLGARF 401
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVFDAVYTPRKT 405
P +D F + L N TP+GM + PV E L V+D +Y PR T
Sbjct: 402 DVPIVPLDD---FHGRRFVGLVNTTPVGMAGYAEGACPVPPERLEGLAWVYDLIYRPRHT 458
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
LL+ A G + G+ M + QA Q +TG++ P+ +
Sbjct: 459 ALLQAASQQGIATLDGLPMLIAQAAEQLARWTGRDVPETIL 499
>gi|384182154|ref|YP_005567916.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328238|gb|ADY23498.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L + M
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|228941501|ref|ZP_04104051.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974431|ref|ZP_04134999.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981026|ref|ZP_04141328.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|384188408|ref|YP_005574304.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676723|ref|YP_006929094.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452200800|ref|YP_007480881.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778686|gb|EEM26951.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228785267|gb|EEM33278.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818151|gb|EEM64226.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942117|gb|AEA18013.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175852|gb|AFV20157.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452106193|gb|AGG03133.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|423368385|ref|ZP_17345817.1| shikimate dehydrogenase [Bacillus cereus VD142]
gi|401080712|gb|EJP88996.1| shikimate dehydrogenase [Bacillus cereus VD142]
Length = 277
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVTIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423406241|ref|ZP_17383390.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
gi|401660235|gb|EJS77717.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
Length = 277
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQAVSSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + ++AK L ++V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTANV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +TR
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFETR 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|229198462|ref|ZP_04325166.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|423573986|ref|ZP_17550105.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|423604016|ref|ZP_17579909.1| shikimate dehydrogenase [Bacillus cereus VD102]
gi|228584965|gb|EEK43079.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|401212555|gb|EJR19298.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|401245702|gb|EJR52055.1| shikimate dehydrogenase [Bacillus cereus VD102]
Length = 277
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAYYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229163283|ref|ZP_04291237.1| Shikimate dehydrogenase [Bacillus cereus R309803]
gi|228620190|gb|EEK77062.1| Shikimate dehydrogenase [Bacillus cereus R309803]
Length = 277
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLAMQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
PL G+ +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADIGVK----EIDVANRTVDKAEELIAAC 164
Query: 351 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 KAHVTSVALSLEKATEEQENYDIIIQTTTIGMHPYVEHTPLQICSLKKGTIVSDIIYNPF 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T++L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRIPNIDRMKQLVIKKL 275
>gi|423385836|ref|ZP_17363092.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
gi|401635892|gb|EJS53647.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
Length = 277
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCLLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|229019559|ref|ZP_04176375.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
gi|229025800|ref|ZP_04182199.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228735508|gb|EEL86104.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228741725|gb|EEL91909.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 346
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L A+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 228 ILGGAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|47569330|ref|ZP_00240014.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
gi|47554001|gb|EAL12368.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQYTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|423389348|ref|ZP_17366574.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
gi|401641439|gb|EJS59156.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAKQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 346
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEQAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L DA+ GAII +G++MF+ Q F ++T + M+++V+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTECVPNIDRMKQLVMREL 275
>gi|423483917|ref|ZP_17460607.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
gi|401141468|gb|EJQ49023.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
Length = 277
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVDPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLVDVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQVVMREL 275
>gi|228902860|ref|ZP_04067003.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|434377502|ref|YP_006612146.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
gi|228856784|gb|EEN01301.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|401876059|gb|AFQ28226.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
Length = 277
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|229086905|ref|ZP_04219064.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
gi|228696415|gb|EEL49241.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
Length = 277
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F + + + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFENCSIDAHYHAFLVEEMALGEAVKGLKALGVSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++MK+ DE+ PLA+ I AVNT+++R D KLIGYNTD + +++ K+
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVQR--DEKLIGYNTDGIGYVRSLQSISKD---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + E+A L + G
Sbjct: 117 --------PLDQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANQLIAGCQGKI 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L EK I+ + T +GM+P+ P+ ++L+ +V D +Y P +T+L
Sbjct: 169 TSHALSLEQATEKQKNYDIIIHTTTIGMYPHVQSTPLQIQSLKQGTIVSDIIYNPFETKL 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L+DA+A GAI+ +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LQDAKAQGAIVQNGIDMFVYQGALAFEMWTGRIPNIERMKQLVMRKL 275
>gi|386346035|ref|YP_006044284.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
gi|339411002|gb|AEJ60567.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
Length = 491
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 204/440 (46%), Gaps = 33/440 (7%)
Query: 12 GGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
GG +EG E EAL L G YVD E A ++ + + G I S ++
Sbjct: 67 GGFFEGTEDVHDEALGELVRQGGWAYVDVEAWAADWLVDE---VRRRGMHVIRSRHVMDG 123
Query: 71 TPSEEDLGYLVSRMQATGADIIK----LVFSVNDITEIARIFQLLSHCQVPIIAY---SV 123
P EDL + + ++ G ++ ++ D+ + R+ + ++ +P +Y +
Sbjct: 124 VP--EDLEHWM--VETAGQGLVPKAACMLGGTEDLLRLVRLHRRITAEGLPPGSYILLGM 179
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 182
G G+ S++LS + L + S G T G + Y+V ++ T +FG+I P
Sbjct: 180 GPYGVPSRILSLAWGSLLTFSSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGVIGNP 239
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
V HS+ P LHNP +R + +Y+P+ VDDL F G SV P+KE V+ F
Sbjct: 240 VLHSRSPHLHNPVYRREGMDAVYLPIQVDDLTSFMDLADELSLQGLSVTIPHKEGVIPFL 299
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
P+ QA+ + NT++RR DG G +TD E + + + I A G P+
Sbjct: 300 TVRDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGGDPVM 348
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGAARPFEDILNF 359
VL GAGGA RA+ +G G RV++ + ERA+ LA + GA P E
Sbjct: 349 KAAVVL-GAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAEEFGVDWGALSP-ESAERM 406
Query: 360 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ +G I+ T +GM PV ++ +D VYTPR T L+ A AG I+
Sbjct: 407 REFRGLIV-QTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAGCRII 465
Query: 420 SGVEMFLRQAIGQFNLFTGK 439
+G M QA Q LF +
Sbjct: 466 TGDRMLEAQAEEQMRLFAAR 485
>gi|337289037|ref|YP_004628509.1| Shikimate dehydrogenase [Thermodesulfobacterium sp. OPB45]
gi|334902775|gb|AEH23581.1| Shikimate dehydrogenase [Thermodesulfobacterium geofontis OPF15]
Length = 274
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 24/278 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+V+G+I PV HS PI+HN FR N +Y V D L K + + G SV
Sbjct: 3 EVYGIIGDPVSHSLSPIMHNLAFREKNIRAVYGAFRVSADQLAKAVEGIKALNIKGLSVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++++ DE+ +A I AVNT++ + +G L GYNTD I A E
Sbjct: 63 IPHKEKIIEYLDEIDEIAYEIGAVNTVLNK--EGILKGYNTDWIGVIKAFE--------- 111
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
G L + V+ GAGGA +A+ + KS+ ++ +++ FE+AK L A
Sbjct: 112 ----VNGVELRDKKIVVIGAGGASKAVIYALIKSKAKKIHVYNRTFEKAKILEEKFKIIA 167
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+P+E++ N + G I+ T +G+ + PV EE + +++ D VY P KT+ L
Sbjct: 168 KPWEELKNAE---GDIIIQTTSVGL--KSWETPVEEEIISRFKVAMDIVYLPLKTKFLSI 222
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
AE G II G++M L Q + QF L+TG E P E M++
Sbjct: 223 AERYGKII-DGLQMLLYQGVEQFKLWTGIEPPVELMKK 259
>gi|228910172|ref|ZP_04073991.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|423358629|ref|ZP_17336132.1| shikimate dehydrogenase [Bacillus cereus VD022]
gi|228849455|gb|EEM94290.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|401084501|gb|EJP92747.1| shikimate dehydrogenase [Bacillus cereus VD022]
Length = 277
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIGRMKQLVIEKL 275
>gi|423558082|ref|ZP_17534384.1| shikimate dehydrogenase [Bacillus cereus MC67]
gi|401191350|gb|EJQ98372.1| shikimate dehydrogenase [Bacillus cereus MC67]
Length = 277
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AVM++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAVMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423561197|ref|ZP_17537473.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
gi|401201454|gb|EJR08319.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
Length = 277
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + V + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEVDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|302339344|ref|YP_003804550.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301636529|gb|ADK81956.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
Length = 492
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 210/452 (46%), Gaps = 29/452 (6%)
Query: 2 LCNVSRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT-- 59
L +R GG+++ E +R++ L A + G +VD E ++L + + SG
Sbjct: 54 LIATARLPKDGGVWKEGEEERIDLLRKAAESGFAFVDLEADQPRSLL-RSFVELLSGYGG 112
Query: 60 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI- 118
R I S + E L +V + GA V ++ +A L + P
Sbjct: 113 RLIASFHDFTSFTDERTLFSMVEEAEGLGAIPKAAVMIDGSVSLLAFTRAALKLKERPAE 172
Query: 119 -IAYSVGERGLVSQLLSPKFNGALVY-GSLKGTPVLGLPTVESLRQTYKVEHINADTKVF 176
I ++G G+ ++ F L + + G + E+L Y + I+ +++F
Sbjct: 173 RILVAMGSFGVPVRIAYRHFGSMLTFCAPAEKIAAPGQLSAEALAFPYALSRISDKSRLF 232
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
G+I PV H++ P +HN FR + ++G+Y+P DD F + GFSV P+KE
Sbjct: 233 GIIGNPVLHTRSPEIHNSAFRSIGFDGLYLPFPTDDTVAFMEIARLLEIGGFSVTVPFKE 292
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
++ EV +AI + NT+ RR + G NTD + + ++ + +RG
Sbjct: 293 EIIGRLHEVDENVRAIGSCNTVFRRGHE--FHGTNTDYDGFLAPLKIRLGKRG------- 343
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG----AARP 352
GR ++ G+GGA R++A +S VV+ + RA+ L+ ++G P
Sbjct: 344 ------GRALMI-GSGGAARSVAVALRSLFDSVVVANRTHSRAQRLSEALLGEKGHVCSP 396
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
E+ + P + ++ T +GM P+ D P+ +LV+D +Y P KT L+ AE
Sbjct: 397 -EEAGSLGPYR--VIVQTTSVGMSPHIDDDPLPSYCFTGDELVYDIIYIPEKTHFLQRAE 453
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
A+G I+ G EM L QA QF LFTG PK+
Sbjct: 454 ASGCDIIGGKEMLLGQAERQFELFTGLRYPKD 485
>gi|423452362|ref|ZP_17429215.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|423470556|ref|ZP_17447300.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
gi|423521807|ref|ZP_17498280.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|401140000|gb|EJQ47557.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|401176469|gb|EJQ83664.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|402436222|gb|EJV68254.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
Length = 277
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|218899502|ref|YP_002447913.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228967401|ref|ZP_04128434.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564189|ref|YP_006606913.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
gi|226724115|sp|B7IYI7.1|AROE_BACC2 RecName: Full=Shikimate dehydrogenase
gi|218543181|gb|ACK95575.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228792289|gb|EEM39858.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401792841|gb|AFQ18880.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
Length = 277
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|389581076|ref|ZP_10171103.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
gi|389402711|gb|EIM64933.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
Length = 266
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 153/283 (54%), Gaps = 20/283 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+A T+++ L P HSKGP++HN F+ + N +Y+ V D + D G
Sbjct: 2 IDAATRLYCLFGNPARHSKGPVIHNAAFKDKDINAVYLAFEVQDAAGAAQAVRTLDIKGA 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE++M+ D + P A+AI AVNTI+ +G L GYNTDC+A++ +
Sbjct: 62 SVTIPFKESIMEHIDWIDPTARAIGAVNTIVNE--NGVLKGYNTDCQAAVAPL------- 112
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
FG ++G+ + GAGGA RA+A G +++ ++I + ++ ++LA V
Sbjct: 113 ------VPFG--ISGKTVCIVGAGGAARAVAHGIEAQNGDIIITNRTEQKGRALAETVNA 164
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P E++ N Q + ++ N T +GM P + + E LR +V D VYTP +TRLL
Sbjct: 165 RFIPAEEMENIQAD---VIINTTSIGMTPKENEISFPPEALRSEMVVMDVVYTPLRTRLL 221
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+ AE G + G+ MF+ QA QF L+TG + MR ++
Sbjct: 222 EAAEQKGCTTIDGLSMFIAQAAAQFELWTGIIPDTDLMRNTII 264
>gi|325971052|ref|YP_004247243.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
gi|324026290|gb|ADY13049.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
Length = 494
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 206/455 (45%), Gaps = 41/455 (9%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNIL-----------GKQYSSHQSGTR 60
GG E +RL+ L+ A YVD E V L + S Q +
Sbjct: 64 GGSCTLSEKQRLQLLYEAAKGDFAYVDIEDDVKKTDLKFKDPLFEQKVDLEQSLKQRHIK 123
Query: 61 FIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLSHCQV 116
I S N +C P+ D+ +S++ A G DI K+ S+ D+ + R+ Q L++ +
Sbjct: 124 IIRSYHNFEC-VPA--DIFGRISKLAAKG-DIPKVAVTPKSMMDVITLFRVEQELANLKE 179
Query: 117 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVF 176
I+ +GE G+ +++L K L + S G + +++ Y+ + ++ T +F
Sbjct: 180 KIVI-GMGEYGICTRILYKKCGSFLSFCS-DSQAAPGHLSAQTMSTLYRADKLDEKTHIF 237
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
G+I PV H+ P +HNP F + YN +YVP VD ++ FF GFSV P+K
Sbjct: 238 GIIGNPVYHTASPKIHNPGFEAIRYNAVYVPFLVDSVRAFFKLAEMLQIHGFSVTVPHKR 297
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
+V + + + I + NT++R + K G NTD + I + + + KN
Sbjct: 298 SVQPYLGRITREVKQIGSCNTVVRIQNMWK--GTNTDYYGFLAPISEQLGKGEIKNA--- 352
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 356
++ GAGGA RA+ + + G +V I + E A++LAS+ M F+ +
Sbjct: 353 ----------LVVGAGGAARAVVWALHNHGVKVTILNRSMEHARTLASETMST---FDTL 399
Query: 357 LNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
N G ++ T +GM + + ++ ++ VY P++T LK A A
Sbjct: 400 ENAHLYNGNCELVVQTTSVGMGNLGNEECIPSFNFTGKEIAYELVYNPKETLFLKRAMEA 459
Query: 415 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
G I+ G +M + Q QF FTG P +I
Sbjct: 460 GCTIIGGSQMLMEQGKLQFEAFTGYHYPHWIQADI 494
>gi|374295740|ref|YP_005045931.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
gi|359825234|gb|AEV68007.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
Length = 293
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 24/291 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
+ TK+ GLI PV HS P LHN + + + IYVP+ VD DL+ + +F
Sbjct: 7 VTGKTKLLGLIGNPVEHSISPQLHNSLSKILGLDLIYVPLRVDKEDLETLVKALKATEFV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V PYK +MKF D A + +VNT+ + DG+L GYNTD E + A ++A
Sbjct: 67 GFNVTVPYKREIMKFLDGNTKEAILMGSVNTV--KKIDGRLYGYNTDGEGFLRAFKEAA- 123
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ G+ V+ GAGGA R +A GA ++ + + +++ LA
Sbjct: 124 -----------GTDFKGKKVVMLGAGGAARPIAVKIALEGAEKISLVNRTTQKSVELAEV 172
Query: 346 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
V + NF+ E+ I+ N T +GM P+ D +S+ + + Q+V+D
Sbjct: 173 VNENIAEIVQVYNFEDKTLKLAFEESDIIINTTSVGMSPDIDNSLISDTSYFNGQIVYDI 232
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+Y P KT+ L DAE+ G I++G+ M Q I + ++TG + +E +R++
Sbjct: 233 IYNPVKTKFLADAESRGCKIINGLGMLFYQGINAYEIWTGVKISEEILRDL 283
>gi|228916966|ref|ZP_04080527.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842687|gb|EEM87774.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|49481393|ref|YP_038388.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196039231|ref|ZP_03106537.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
gi|81696659|sp|Q6HDI8.1|AROE_BACHK RecName: Full=Shikimate dehydrogenase
gi|49332949|gb|AAT63595.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196029858|gb|EDX68459.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
Length = 277
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|300118673|ref|ZP_07056401.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
gi|298723922|gb|EFI64636.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
Length = 277
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGDPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|228923087|ref|ZP_04086379.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423634842|ref|ZP_17610495.1| shikimate dehydrogenase [Bacillus cereus VD156]
gi|228836585|gb|EEM81934.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401278828|gb|EJR84758.1| shikimate dehydrogenase [Bacillus cereus VD156]
Length = 277
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVPLSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|402555531|ref|YP_006596802.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
gi|401796741|gb|AFQ10600.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
Length = 277
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 150/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|423582542|ref|ZP_17558653.1| shikimate dehydrogenase [Bacillus cereus VD014]
gi|401213421|gb|EJR20162.1| shikimate dehydrogenase [Bacillus cereus VD014]
Length = 277
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
E Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVPLSLEKATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|229093404|ref|ZP_04224509.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
gi|228689998|gb|EEL43801.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
Length = 277
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMGAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|350271939|ref|YP_004883247.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348596781|dbj|BAL00742.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 150/296 (50%), Gaps = 25/296 (8%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSS 222
+ +I DTK+ GL+ P+ S L N + + Y+P+ V D L +
Sbjct: 1 MHYITVDTKMIGLLGTPLRQSVSYKLQNRVYEQAGLDYFYLPIEVSTEDRLPAVVEGIRA 60
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
+FAGF++ PYKE ++K+ DE L + A NT+ R DGKLIGYNTD + ++E
Sbjct: 61 MNFAGFAITKPYKETILKYLDERDDLVTKMGACNTVAVR--DGKLIGYNTDGIGCVRSLE 118
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 342
G + G+ F GAGGA RA+ F RGA+ ++ +R + L
Sbjct: 119 ------------VDGGLDIKGKTFFSFGAGGAARAVCFELACRGAKQIVISSASQRCEHL 166
Query: 343 ASDVM----GAARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
A D+ G P E+ + + +L N + +GM P+ P+ ++ + +QL
Sbjct: 167 AEDINRLFPGLCVPVRLTDEERMYEYIRQADVLLNMSGIGMAPHLGESPMKKDRFQPHQL 226
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+DAVY P KTR L+DAEAA I++G+ M + Q + Q ++TG +AP + M + V
Sbjct: 227 CYDAVYDPEKTRFLQDAEAARCRILNGLGMVIYQGLEQIKIWTGVDAPAQIMFDAV 282
>gi|158523119|ref|YP_001530989.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511945|gb|ABW68912.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 286
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 153/293 (52%), Gaps = 25/293 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAG 227
++ T++ +I PV HS P +HN F N N +YV V+D+ + + +F G
Sbjct: 4 VDTATRLCAVIGNPVEHSLSPAIHNAAFAARNLNFVYVAFRVNDVGPALAGMRALENFRG 63
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
S+ P+K + + DE+ L +A+ A+NT++ G+L G NTD ++ A+++A
Sbjct: 64 MSITIPHKISAIGHVDEITDLDRAMGAINTVVNE--KGRLTGSNTDGPGALKALKNA--- 118
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASD 345
G +G+ ++ GAGG RA+AF + A +V+ DID + L+SD
Sbjct: 119 ----------GVETSGKTVLMLGAGGVARAIAFTLAWQADIAELVLLDIDSALREQLSSD 168
Query: 346 VMG------AARPFED-ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
+ A FE+ L + I+ + TP+GMHP TD V + R VFD
Sbjct: 169 LKNGTSATITAAGFENKALAHAMARADIVIHCTPVGMHPKTDASLVPPDLFRPGMAVFDV 228
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VY P +T+LL +A A G VSGVE+F+ QA+ QF FTG+ P + MR +V+
Sbjct: 229 VYNPLETKLLTEAAAFGLKTVSGVELFVNQAVLQFEKFTGETGPADVMRRVVM 281
>gi|62319331|dbj|BAD94599.1| putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 139
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 97/136 (71%)
Query: 315 GRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLG 374
G+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G +LAN T +G
Sbjct: 1 GKALAYGAKEKGAKVVIANRTYERALKLAEAIGGKALSLTDLDNYHPEDGMVLANTTSMG 60
Query: 375 MHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 434
M PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EMF+RQA QF
Sbjct: 61 MQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFE 120
Query: 435 LFTGKEAPKEFMREIV 450
+FTG APKE +I+
Sbjct: 121 IFTGLPAPKELYWQIM 136
>gi|218905471|ref|YP_002453305.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228929379|ref|ZP_04092402.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123873|ref|ZP_04253066.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|226724114|sp|B7JNW6.1|AROE_BACC0 RecName: Full=Shikimate dehydrogenase
gi|218536842|gb|ACK89240.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228659587|gb|EEL15234.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|228830285|gb|EEM75899.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|298675580|ref|YP_003727330.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
gi|298288568|gb|ADI74534.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
Length = 275
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 151/286 (52%), Gaps = 22/286 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 232
VFG+ PV HS P +HN F + + IY VD L+ + ++ F G ++
Sbjct: 4 VFGVFGDPVEHSLSPDMHNAAFSELGMDSIYHAFRVDKKSLEYALNGANAMGFGGVNITV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P K+ +KF + PLA I AVNTI R ++ +IGYNTD + AI DA
Sbjct: 64 PLKQEALKFVN-TDPLASKIGAVNTIDFR-NENDMIGYNTDGVGARRAIADA-------- 113
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGAA 350
G + + ++ GAGGA RA+ F + GA ++I + +A LA DV +G A
Sbjct: 114 -----GVDVKNKNILILGAGGASRAICFQFANDGADLIIANRTESKALELAEDVKSVGNA 168
Query: 351 RP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
R F ++ E IL N T +GMHPNT ++ E + +VFD VY P +TRLL
Sbjct: 169 RGIGFSNLEELIAESD-ILINTTTVGMHPNTKDTIITSEHMHSGLVVFDIVYNPLETRLL 227
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
K+A++AGAI V+G+ MF+ Q F ++TG+ P E M+ VL +
Sbjct: 228 KEAKSAGAIPVNGLMMFVYQGAEAFKIWTGENPPIEVMKNTVLEEL 273
>gi|301055826|ref|YP_003794037.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|423549924|ref|ZP_17526251.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
gi|300377995|gb|ADK06899.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|401189540|gb|EJQ96590.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
Length = 277
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLREKRILLLGAGGASRAIYFSLVDAGVKEIAVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|52141171|ref|YP_085659.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
gi|81686158|sp|Q634K8.1|AROE_BACCZ RecName: Full=Shikimate dehydrogenase
gi|51974640|gb|AAU16190.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
Length = 277
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|115488882|ref|NP_001066928.1| Os12g0534000 [Oryza sativa Japonica Group]
gi|113649435|dbj|BAF29947.1| Os12g0534000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 100/140 (71%)
Query: 315 GRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLG 374
G+ALA+GAK +GARVVI + F RA+ L + + A ++ N+ PE+ ILAN T +G
Sbjct: 8 GKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHPEEEMILANTTAIG 67
Query: 375 MHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 434
MHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG+EMF+RQA+GQF
Sbjct: 68 MHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFE 127
Query: 435 LFTGKEAPKEFMREIVLAKF 454
FTG AP MR+IVL K
Sbjct: 128 HFTGMPAPDSLMRDIVLTKI 147
>gi|228935655|ref|ZP_04098469.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824015|gb|EEM69833.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|73668461|ref|YP_304476.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
gi|121718714|sp|Q46DZ6.1|AROE_METBF RecName: Full=Shikimate dehydrogenase
gi|72395623|gb|AAZ69896.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
Length = 280
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ P+ HS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 232 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P KE +K C + PLA+ I AVNTI+ + G++ GYNTD + A++++ E
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVE--- 118
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G V+ GAGGA R++AF + GA + I + RA LA D+ A+
Sbjct: 119 ----------MEGSKIVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAAS 168
Query: 351 -------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ + N + IL N T LGMHPN D + E L VFD VY P
Sbjct: 169 LSGNVTGKGLSGLKNLL-QDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPL 227
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+TRLL++A+A+GA VSGV M + Q F L+TG E P E M++ VL
Sbjct: 228 ETRLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKKTVL 275
>gi|125973371|ref|YP_001037281.1| shikimate dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|256004347|ref|ZP_05429328.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|385778715|ref|YP_005687880.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|419722931|ref|ZP_14250067.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
gi|419724721|ref|ZP_14251780.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|125713596|gb|ABN52088.1| shikimate 5-dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|255991631|gb|EEU01732.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|316940395|gb|ADU74429.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|380771940|gb|EIC05801.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|380780988|gb|EIC10650.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
Length = 298
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 140/282 (49%), Gaps = 25/282 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+ TK+ GL+ PV HS P LHN + + +Y+P+ V +DL+ + DF
Sbjct: 6 RVTGKTKLLGLVGNPVEHSISPQLHNTLSSLLGLDIVYIPLAVGKEDLETVVKALKALDF 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V PYK +MK+ DE A + AVNT+ + DG+L GYNTD E +
Sbjct: 66 IGFNVTIPYKRDIMKYLDENSKEAILMGAVNTV--KKIDGRLYGYNTDAEGFL------- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
R +K G G+ VL GAGG RA+A S A ++ + + E++ LA
Sbjct: 117 --RSFKEEA---GVGFKGKKVVLIGAGGVARAIAVKIASEDAEKISVVNRTVEKSVELAE 171
Query: 345 DVMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVS-EETLRDYQLVF 396
V + + NF+ E+ I+ N T +GM+P T PV E Q+V+
Sbjct: 172 VVNENIKEIVQVYNFEDKTFRMAFEESDIIINTTSVGMYPKTRETPVKFTECFNKNQIVY 231
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
D +Y P KT+ L DAE GA I++G+ M Q I + ++TG
Sbjct: 232 DVIYNPEKTKFLNDAEKRGAKIINGLGMLFYQGISAYEIWTG 273
>gi|337287267|ref|YP_004626740.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
gi|335360095|gb|AEH45776.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
Length = 273
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 149/275 (54%), Gaps = 23/275 (8%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
+G+I PV HS P +HN F+ + +Y +P+ ++L + + + G SV P
Sbjct: 4 YGIIGWPVAHSLSPAMHNAAFKSLGIRAVYGLLPLAPENLAEGIKGIRALNIKGVSVTVP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE VM DE+ P+A I AVNTI+ + DG+L+G+NTD A+E+ I
Sbjct: 64 HKETVMPLLDEIDPVASEIGAVNTIVNK--DGRLLGFNTDWIGVKKALEEKIA------- 114
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
++G+ V+ GAGGA +A+ + GA V I++ FE+AK LA + G A P+
Sbjct: 115 -------ISGQKAVVVGAGGAAKAVVYALIKEGASVAIYNRTFEKAKRLAQTLGGVALPW 167
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
E++ + G IL T +G+ D+ PV +E L ++LV D VY P KTRLL++AE
Sbjct: 168 EELAS---ASGDILIQTTSVGL--KEDKSPVPKEVLSRFKLVMDIVYQPLKTRLLREAEE 222
Query: 414 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
AG + G+ M + Q I QF L+ G MRE
Sbjct: 223 AGCETIDGLSMLVYQGIEQFYLWFGARPQASLMRE 257
>gi|118479500|ref|YP_896651.1| shikimate 5-dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196044711|ref|ZP_03111945.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|229186574|ref|ZP_04313735.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|376268232|ref|YP_005120944.1| shikimate 5-dehydrogenase [Bacillus cereus F837/76]
gi|166219218|sp|A0RIV1.1|AROE_BACAH RecName: Full=Shikimate dehydrogenase
gi|118418725|gb|ABK87144.1| shikimate dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196024199|gb|EDX62872.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|228596833|gb|EEK54492.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|364514032|gb|AEW57431.1| Shikimate 5-dehydrogenase I alpha [Bacillus cereus F837/76]
Length = 277
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + +GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229175009|ref|ZP_04302528.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|423457417|ref|ZP_17434214.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
gi|228608470|gb|EEK65773.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|401147801|gb|EJQ55294.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
Length = 277
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK----EIDVANRTADKAKELIAAC 164
Query: 351 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 TATVNSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEYTPLQISSLKKGTIVSDIIYNPF 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T++L +A+ GA+I +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|42783461|ref|NP_980708.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
gi|81699667|sp|Q730K1.1|AROE_BACC1 RecName: Full=Shikimate dehydrogenase
gi|42739390|gb|AAS43316.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
Length = 277
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ +I +
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-SISSK--- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|423400819|ref|ZP_17377992.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|423478476|ref|ZP_17455191.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
gi|401653809|gb|EJS71352.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|402428638|gb|EJV60735.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
Length = 277
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ +DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKKIGAVNTVVH--NDGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK----EIDVANRTVDKAKELIAAC 164
Query: 351 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 TATVNSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPF 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T++L +A+ GA+I +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|428772149|ref|YP_007163937.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428686428|gb|AFZ46288.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
Length = 286
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 154/297 (51%), Gaps = 29/297 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I TKV G+I P+ HS PI+ N +N + IYVP V D L+ + + D
Sbjct: 2 NITGKTKVLGIIGNPIEHSLSPIIQNRAIAFLNLDYIYVPFPVMGDSLQVALDGFRAIDV 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P+K+AVM F E+ AQ I AVNT+ + P G NTD + I ++
Sbjct: 62 QGFNVTIPHKQAVMPFLSEISDTAQLIGAVNTVWQTPEGWH--GTNTDIDGFIAPLKAL- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID-FERAKS 341
R +++ T ++ G GGA RA+ G G R VV +D ++ K+
Sbjct: 119 -NRDWEDVTP-----------IILGNGGASRAVVVGCAQLGCREIKVVGRSLDKLQQFKN 166
Query: 342 LASDVMGAAR----PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--- 394
+ + A+ P+ D+ + P ++ N TPLGM P+ D+ P+ ++ + +L
Sbjct: 167 SWDEQLLQAKITIHPWSDLNDTLPHS-ELIVNTTPLGMSPHVDKSPLDDQQISLLKLGAI 225
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
V+D +YTPR T LL+ A+ GAII+ G EM ++Q F ++T K AP + MR+ +L
Sbjct: 226 VYDLIYTPRPTLLLQKAQNQGAIIIDGTEMLVQQGAVGFQIWTEKNAPVDVMRQALL 282
>gi|381179077|ref|ZP_09887939.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
gi|380769025|gb|EIC03002.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
Length = 502
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 214/450 (47%), Gaps = 50/450 (11%)
Query: 12 GGLYEGDEHKR----LEALHLA-EDLGAD--YVDFELKVASNILGKQYSSHQSGTRFIVS 64
GG YE E R AL A ED + YVDFE + G Q ++ GTR I S
Sbjct: 68 GGKYEEGEASRSMLFARALAFADEDKRKNFAYVDFEDDFI--VPGLQDAALAFGTRIIRS 125
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLSHCQVPIIAY 121
+ D P + ++ +S+M+ TG +I K+ F S++DIT++ + LS + I A
Sbjct: 126 FH-DMNNPVK-NIAQRLSKMRMTGFEIPKIAFMPKSLSDITDLFKEASALSGTEQIICAM 183
Query: 122 SVGERGLVSQLLSPKFNGALVYGS----LKGTPVLGLPTVESLRQTYKVEHINADTKVFG 177
S GL +++L+ +FN L + S ++ LG SL Y+ I+++T++FG
Sbjct: 184 SAF--GLPTRVLAQRFNSYLSFTSPAELMENVKGLGHVDPVSLSSLYRFRSIDSETRLFG 241
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 237
+ P+ + P +HN F N +YVP + ++ F ++ GFSV P+KE
Sbjct: 242 ITGFPLVATSSPKIHNTIFGENEMNAVYVPFKAEKAEEAFEFANTMGVCGFSVTVPHKET 301
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
++ D V Q + A NT++R DGK +G+NTDC E AIKE ++
Sbjct: 302 IIPLLDSVDKGVQEMGACNTVVRE--DGKWLGFNTDC----IGFELAIKEFTGRDS---- 351
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA-----------SDV 346
L+G + GAGGA +A+ + K+ GA IF+ +A+ LA SD
Sbjct: 352 ---LSGMKVSVIGAGGAAKAIVYALKNLGADACIFNRTSVKARKLAEKVGFNYSGLGSDC 408
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ + + D++ KG N+T PN P+ +L++D VY P T
Sbjct: 409 IMKLQSYSDLIVQTTSKG---MNSTD---EPNETNDPIWFYDFTGNELLYDIVYEPNVTP 462
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
++K A AAG + +G+ M Q Q +F
Sbjct: 463 VMKRAAAAGCRVANGLSMLRYQGEEQARIF 492
>gi|376261037|ref|YP_005147757.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
gi|373945031|gb|AEY65952.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
Length = 294
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 25/296 (8%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
VE +N T+++G++ P+ H+K P +HN F+ N +Y+P+ V++ L++
Sbjct: 4 VEIVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNAVYLPVLVENGKLEQVMDGLKGI 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+F GF+V PYK+ V+K+ DEV + A+NT+ + +G+ IG NTD E +
Sbjct: 64 NFLGFNVTVPYKKDVIKYLDEVSAEGMLMGAINTV--KKQNGRFIGTNTDAEGFV----- 116
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 342
R + +G F + G+ +L GAGG RA+A + G + I + AKS+
Sbjct: 117 ----RDFCDG---FETTFKGKRVMLLGAGGTSRAIAVKLATEGIEHLTIVNRTEANAKSI 169
Query: 343 AS-------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 394
+ +++ P +D L+ + E I+ N TP GM D P + QL
Sbjct: 170 SDLVNSNFGNIVNTMLPEKDKLDKELENNQIVINTTPAGMSTYLDSTPFDIDFNFNGTQL 229
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y P+KTR L AE AG I +G M + Q + F ++TG + ++ E++
Sbjct: 230 VYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGMQVERKQTNELL 285
>gi|402815730|ref|ZP_10865322.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
gi|402506770|gb|EJW17293.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
Length = 298
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 159/293 (54%), Gaps = 21/293 (7%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
V +++ +KV+ +I P+ HSK P++HN + + NG+Y V + L+ + +
Sbjct: 13 VRNLDTSSKVYAVIGDPIAHSKSPLMHNAALQEMEVNGVYTAFHVKPEQLEHAVAGIRAL 72
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
G +V P+KE VM + DE+ + I AVNTI+ +GKL GYNTD + ++++
Sbjct: 73 GLGGVNVTIPHKEQVMAYLDEIDESTRVIGAVNTIVH--CEGKLYGYNTDGLGYVRSLQE 130
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSL 342
++ + + V+ GAGGA R +A+ + G + + I + ERA +L
Sbjct: 131 EMQ------------ADIPSSRIVIIGAGGAARGIAYALLAEGCKELTIANRTVERAHAL 178
Query: 343 ASDVMGAARPFEDILN----FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A D+ G + +LN P+ I+ T +GMHP+ D +PV++E L+ + LV D
Sbjct: 179 AEDLSGFGKVRSVMLNDTPAIPPQDVDIVIQTTSVGMHPHIDEMPVAKEWLQSHMLVSDI 238
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+Y P +T LL+ A+A G I +G+ MF+ Q F L+TG +AP E MR+ VL
Sbjct: 239 IYNPLETALLQAAKAQGCRIHNGLGMFVHQGAIAFELWTGMKAPTELMRQKVL 291
>gi|390956953|ref|YP_006420710.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
gi|390411871|gb|AFL87375.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
Length = 512
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 211/449 (46%), Gaps = 27/449 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRFIVSC 65
R K GG + GD ++ L A G VD E++ A + + +G I+S
Sbjct: 80 RRKAFGGDFGGDARAQIAILREAALAGCRLVDIEVETAEELGQAALEELRGAGAAVILSW 139
Query: 66 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH--CQVPIIAYSV 123
+ TP +L ++ RM+ D+ K+V + + + R+ +L + ++A S+
Sbjct: 140 HDFQATP---ELEPVLERMRPFAPDVYKIVPTAKTLRDALRLIDVLEKHGGEGNLVAMSM 196
Query: 124 GERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISK 181
G +G ++++L P+F + S G G +V LR+ Y+V+ I++ T ++ + +
Sbjct: 197 GFKGTLTRVLGPRFGSLFTFASADGHGGTAPGQVSVSVLRELYRVDEISSQTAIYAVAGE 256
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
P+ S P + N F + +Y+P+ D K+ + G S+ P KE VM
Sbjct: 257 PITGSMSPRMQNTAFADAGMDAVYLPLETSDPKELLEVAERLNIRGLSITMPLKELVMPL 316
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 301
+ A NT++R DGKL G+NTD + + I +G
Sbjct: 317 LAFRDRSVEQAGACNTLLRH-RDGKLAGFNTDIAGIVEPLARRITLKG------------ 363
Query: 302 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 361
R+ VL G A A+ +G RGA V + + ERA+ LA++ + E +
Sbjct: 364 -ARVLVLGAGGAARAAV-YGLVERGATVFLLNRTTERAEMLAAESGARVQARETLAETYF 421
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
+ AIL N+TP GM T P+++ + + ++ FD VY P +T L+ A A GA I+ G
Sbjct: 422 D--AIL-NSTPYGMRGQTMDAPITQAEM-NCRVFFDLVYNPLETPLIVAARARGAEIIPG 477
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V MF+ Q QF+L+T + AP+ M +V
Sbjct: 478 VAMFVEQGARQFSLWTERAAPEGEMLRVV 506
>gi|379012573|ref|YP_005270385.1| shikimate dehydrogenase [Acetobacterium woodii DSM 1030]
gi|375303362|gb|AFA49496.1| shikimate dehydrogenase AroE [Acetobacterium woodii DSM 1030]
Length = 286
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 149/282 (52%), Gaps = 25/282 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ DTK++ +I P+ S P LHN F+ + +Y+P+ V ++L+ + +F
Sbjct: 2 KISVDTKIYAVIGDPIAQSLSPQLHNGLFKEAGVDALYLPIAVKSENLENLIKGFRVMNF 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF++ P+K ++K+ DE+ PLAQ I AVNT++ R DGK+ GYNTD I +IE+ I
Sbjct: 62 GGFNITKPHKMEIIKYLDELDPLAQKIGAVNTVVYR--DGKMKGYNTDGFGFIKSIENKI 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
++ P ++ G GGA +++A G +V+I + E+A++LA+
Sbjct: 120 VDQ-----------PKEKLNILILGCGGAVKSVAMALADWGINQVMIANRTMEKAETLAA 168
Query: 345 DV--------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
+ + A E+ L I+ N T LGM R P+ + + QL++
Sbjct: 169 QINDNWPGKAVAIAMETEE-LKKAAATATIIVNGTSLGMADTATRTPLPQALITKEQLIY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
D +Y+P T+L+KDA GA +G+EM L Q + F L+TG
Sbjct: 228 DMIYSPAVTQLMKDAREVGAQTENGLEMLLYQGLLAFELWTG 269
>gi|165873244|ref|ZP_02217854.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227817111|ref|YP_002817120.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CDC 684]
gi|254750915|ref|ZP_05202954.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Vollum]
gi|254806730|sp|C3L5T8.1|AROE_BACAC RecName: Full=Shikimate dehydrogenase
gi|164711003|gb|EDR16570.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227006413|gb|ACP16156.1| shikimate dehydrogenase [Bacillus anthracis str. CDC 684]
Length = 277
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|152976764|ref|YP_001376281.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
gi|189046305|sp|A7GT28.1|AROE_BACCN RecName: Full=Shikimate dehydrogenase
gi|152025516|gb|ABS23286.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V++ L + + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+MK+ DE+ PLA+ I AVNT++ R +GKL+GYNTD + +++ KE
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD----V 346
PL + +L GAGGA RA+ + G + + I + E AK L + V
Sbjct: 117 --------PLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ A E Q E +L T +GMHP+ P+ +L+ +V D +Y P +T+
Sbjct: 169 VSKALSLEKATEAQ-ENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ +GAI+ +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 FLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDINRMKQLVIRKL 275
>gi|326203602|ref|ZP_08193466.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325986422|gb|EGD47254.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 147/296 (49%), Gaps = 25/296 (8%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 223
VE +N T+++G++ P+ H+K P +HN F+ NG+Y+P+ V+ L++ +
Sbjct: 4 VEFVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNGVYLPVLVETGKLEQVMNGLKGI 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+F GF+V PYK+ V+ + DEV + A+NT+ + +G+ IG NTD E + D
Sbjct: 64 NFLGFNVTVPYKKDVINYLDEVSAEGMLMGAINTV--KKQNGRFIGSNTDAEGFVRDFCD 121
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 342
FG+ G+ +L GAGG RA+A G + I + AKS+
Sbjct: 122 G------------FGTTFKGKRVMLLGAGGTSRAIAVRLAMEGIEHLTIVNRTEANAKSI 169
Query: 343 ASDVMG-------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 394
++ V G P +D L+ E I+ N TP GM D P + QL
Sbjct: 170 SNLVNGNFGNLVSTMLPEKDKLDKAIENSQIVINTTPAGMSTYLDSTPFDIDFNFNGTQL 229
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y P+KTR L AE AG I +G M + Q + F ++TG + ++ E++
Sbjct: 230 VYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGIKVERKETNELL 285
>gi|288560500|ref|YP_003423986.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
gi|288543210|gb|ADC47094.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
Length = 298
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 33/305 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ TK+ G+I P+ H+ P + N +N N IY+P V D+L +
Sbjct: 2 VDGKTKILGVIGDPIEHTFSPAMQNAGLEALNLNYIYLPFHVKSDNLNSAIEGAKTLGIR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLI---GYNTDCEASITAIED 283
G +V P+K V+ DEV P+A I AVNTI + + I GYNTD + AIE+
Sbjct: 62 GLNVTIPHKREVITCLDEVDPIANMIGAVNTIKFDYDENEGISTKGYNTDAYGCLRAIEE 121
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSL 342
+ + + + GAGGA RA+AF A S + I + +F +A+SL
Sbjct: 122 K--------------ASVKDKKITIVGAGGASRAIAFQMASSDIGELSILNRNFNKAESL 167
Query: 343 ASDVMGAARPFEDILNF------------QPEKGAILANATPLGMHPNTDRVPV-SEETL 389
A+D+ + D N + ++ IL + TP+GM+PN + P+ S + +
Sbjct: 168 ANDIKSNLKQLNDNFNLNINAYDMDSLKREIQESEILIDTTPIGMYPNINDKPIASADMM 227
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
D +V D VYTP +T L+K+A+ A A +V G +M L Q I F ++ G+EAP + M
Sbjct: 228 HDDLIVNDIVYTPMETSLIKEAKKANAEVVYGYKMLLYQGIRSFEIWLGEEAPVKEMENA 287
Query: 450 VLAKF 454
+L F
Sbjct: 288 LLKVF 292
>gi|49187228|ref|YP_030480.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167634541|ref|ZP_02392861.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|167638665|ref|ZP_02396941.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|170687435|ref|ZP_02878652.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|177653290|ref|ZP_02935542.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190566996|ref|ZP_03019912.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034558|ref|ZP_03101967.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228948048|ref|ZP_04110333.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|254684091|ref|ZP_05147951.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CNEVA-9066]
gi|254721925|ref|ZP_05183714.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A1055]
gi|254736439|ref|ZP_05194145.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Western North
America USA6153]
gi|254741476|ref|ZP_05199163.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Kruger B]
gi|254757757|ref|ZP_05209784.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Australia 94]
gi|421506588|ref|ZP_15953511.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|421638409|ref|ZP_16079005.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
gi|49181155|gb|AAT56531.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167513513|gb|EDR88883.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|167529993|gb|EDR92728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|170668630|gb|EDT19376.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|172081572|gb|EDT66644.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190561987|gb|EDV15956.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993100|gb|EDX57059.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228811634|gb|EEM57970.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|401823581|gb|EJT22728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|403394835|gb|EJY92075.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|225866315|ref|YP_002751693.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB102]
gi|254806731|sp|C1ESM8.1|AROE_BACC3 RecName: Full=Shikimate dehydrogenase
gi|225789755|gb|ACO29972.1| shikimate dehydrogenase [Bacillus cereus 03BB102]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|307718011|ref|YP_003873543.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6192]
gi|306531736|gb|ADN01270.1| 3-dehydroquinate dehydratase, type 1 [Spirochaeta thermophila DSM
6192]
Length = 491
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 200/436 (45%), Gaps = 25/436 (5%)
Query: 12 GGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
GG +EG E EAL L G YVD E A ++ + + + G I S ++
Sbjct: 67 GGFFEGTEDVHDEALGELIRQGGWAYVDVEAWAADWLVDE---ARRRGMYVIRSRHVMDG 123
Query: 71 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY---SVGERG 127
P + + + + Q ++ D+ + R+ + L+ +P +Y +G G
Sbjct: 124 VPEDLEDWMVETVGQGLVPKAACMLGGTEDLLRLVRLHRRLTARGLPPGSYILLGMGPYG 183
Query: 128 LVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 186
+ +++LS + L + S G T G + Y+V ++ T +FG+I PV HS
Sbjct: 184 VPTRILSLAWGSLLTFTSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGVIGNPVLHS 243
Query: 187 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
+ P LHNP +R + +Y+P+ VD+L F G SV P+KE V+ F
Sbjct: 244 RSPHLHNPVYRREGMDAVYLPIQVDELASFMDLADELPLQGLSVTIPHKEGVIPFLTVCD 303
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 306
P+ QA+ + NT++RR DG G +TD E + + + I A G P+
Sbjct: 304 PVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGGDPVMKAAV 352
Query: 307 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGAARPFEDILNFQPEK 363
VL GAGGA RA+ +G G RV++ + ERA+ LA + GA P E + +
Sbjct: 353 VL-GAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAGEFGVDWGALSP-ESAERMREFR 410
Query: 364 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 423
G I+ T +GM PV ++ +D VYTPR T L+ A AG I++G
Sbjct: 411 GLIV-QTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAGCRIITGDR 469
Query: 424 MFLRQAIGQFNLFTGK 439
M QA Q LF +
Sbjct: 470 MLEAQAEEQMRLFAAR 485
>gi|229031985|ref|ZP_04187970.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
gi|228729340|gb|EEL80332.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
Length = 277
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 150/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + D++ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDKIDPLAKKIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIASCTATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GA++ +G++MF+ Q F ++TG + M+++V+ K
Sbjct: 229 LCEAKEQGAVVQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVIRKL 275
>gi|114566075|ref|YP_753229.1| shikimate 5-dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318819|sp|Q0AZJ6.1|AROE_SYNWW RecName: Full=Shikimate dehydrogenase
gi|114337010|gb|ABI67858.1| shikimate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 290
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 158/293 (53%), Gaps = 27/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T++ GLI P+ HS P++HN T + + N IY+ + +++ L + S + +F
Sbjct: 3 LDIKTELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE ++ F DE+ P A A AVN I + +G L GYNTD + +A++
Sbjct: 63 GLNVTIPYKEKIIPFLDELSPEAAAFGAVNVI--KNKNGHLHGYNTDGRGFV----EALR 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
E G G + +F+ GAGGA R++AF G +R+ D+DF RA+ LA
Sbjct: 117 EEGIDPGERA--------LFI--GAGGAARSVAFALAGLGVSRLDFLDLDFSRARQLAEF 166
Query: 346 VMG-----AARPFEDILNFQ--PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-D 397
+ A+ + L FQ +I+ N +P+GM P+T + PVS+E LR + V D
Sbjct: 167 ITSRSSSLASAFLMNTLEFQRLSRTASIIINCSPVGMFPDTGKSPVSKEDLRGSRAVLCD 226
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P ++R L + G ++G+ MF++Q + G++ P ++M+E+V
Sbjct: 227 LIYNPLQSRFLSLGQELGLETMNGLGMFVQQGALTLEILLGQKPPLDYMKEVV 279
>gi|20807710|ref|NP_622881.1| shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|254479120|ref|ZP_05092471.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
gi|24211499|sp|Q8RAG2.1|AROE_THETN RecName: Full=Shikimate dehydrogenase
gi|20516261|gb|AAM24485.1| Shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|214034934|gb|EEB75657.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
Length = 280
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 26/289 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TKVFGLI PV HS P++HN +F +N+NG+YV V + L+ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENAVKGLKALGIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+KE+VM + D V A+ I AVNT++ +G L GYNTD + I D++K
Sbjct: 63 GFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----DSLK 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
E + GR + GAGGA +A+ F G +VI + +AK+LA
Sbjct: 117 E---------LKEDVRGRKAFVLGAGGASKAICFALAREGVESIVIANRTLNKAKALAEY 167
Query: 346 VMGAAR------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
+ + E++ F + IL N T +GMHP PVSEE + V+D +
Sbjct: 168 IREEFKMKCDYCSIEEVEKFN--EIDILINTTSVGMHPEVGNSPVSEEVVAKANFVYDLI 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Y P +T LK A G +G+ M + QA F L+TG+ K+F+ E
Sbjct: 226 YNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTGEFFDKDFVYE 274
>gi|301057611|ref|ZP_07198691.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
gi|300448335|gb|EFK12020.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
Length = 272
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
K++G++ PVGHS P +HN F ++ Y DLK + +G S+ P
Sbjct: 7 KIYGVLGNPVGHSLSPAMHNAAFEALDIPSFYGAFKTTDLKGCIRGMRALGISGMSITIP 66
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+K VM + D + PLA+ I AVNTI+ +G L GYNTD ++ A+E +
Sbjct: 67 FKTDVMAYLDALDPLAEQIGAVNTIVNE--NGLLRGYNTDGAGAMKALEAVVDP------ 118
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
G+ VL GAGGA R + F A G ++ + + R ++LA + P
Sbjct: 119 --------VGKRCVLVGAGGAARGIGFMAVKNGMKLTVSNRSENRGRTLADFLECPFVPL 170
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
+I + + +L TP+GM P + PVS + R+ +V DAVY P +T++LKDA +
Sbjct: 171 SEIKSLDTD---VLIQTTPVGMFPRENASPVSADMFREGMVVMDAVYNPMETKMLKDARS 227
Query: 414 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
G + G+EMF+ Q QF L+TG EAP + MR +V
Sbjct: 228 RGCETIGGLEMFIHQGALQFQLWTGLEAPLKVMRAVV 264
>gi|295706669|ref|YP_003599744.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294804328|gb|ADF41394.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 279
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 23/290 (7%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 230
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYK +MK DEV PLA+AI AVNT++++ DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVKQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR--VVIFDIDFERAKSLASDV-- 346
GS L+ + ++ GAGGA +A+ + ++ A + I + E+A LA+++
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAVLANELPF 167
Query: 347 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
AA D Q + I+ N T +GM+PN D +P++ L+ +V D +Y P K
Sbjct: 168 STKTAAMSISDA-EKQLDTFDIIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNPLK 226
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T+LLK+AEA GA +GV MF+ Q F +T +E M IVL+
Sbjct: 227 TKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVLSTL 276
>gi|30264406|ref|NP_846783.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Ames]
gi|47529857|ref|YP_021206.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|65321706|ref|ZP_00394665.1| COG0169: Shikimate 5-dehydrogenase [Bacillus anthracis str. A2012]
gi|170707392|ref|ZP_02897846.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229603912|ref|YP_002868624.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0248]
gi|30259064|gb|AAP28269.1| shikimate dehydrogenase [Bacillus anthracis str. Ames]
gi|47505005|gb|AAT33681.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|170127636|gb|EDS96509.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229268320|gb|ACQ49957.1| shikimate dehydrogenase [Bacillus anthracis str. A0248]
Length = 308
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 22/285 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVI 272
>gi|282898783|ref|ZP_06306770.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281196310|gb|EFA71220.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 30/288 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALHHLGLDYVYLPFPIAPDNLQQAIAGFASIGVV 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+A++ E+ P+AQAI AVNT+IR + IG NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHEISPVAQAIGAVNTVIR--VGERWIGTNTDVAGFIAPLQTTYN 129
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ ++ + V+ G GGA RA+ G G A + + + E+ K L
Sbjct: 130 QNWHE------------KKAVVIGNGGAARAVVAGCIQLGMAEIHLVGRNIEKLKQLEQS 177
Query: 346 VMGAARPFE----------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DY 392
+ + E D L + +L N TP+GM+PN D PV+E+ L +
Sbjct: 178 WIDSPLAHELTNKLKTHSWDQLPQLIPQCNLLVNTTPIGMYPNIDESPVTEDQLHKLPSH 237
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+ +D +YTP+ TR L+ A+A GAI + G+EM ++Q L+ +E
Sbjct: 238 AIAYDLIYTPKPTRFLQLAQAQGAIALDGLEMLVQQGAAALKLWLQQE 285
>gi|294501322|ref|YP_003565022.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294351259|gb|ADE71588.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 279
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 23/290 (7%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 230
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYK +MK DEV PLA+AI AVNT++ + DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVNQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDV-- 346
GS L+ + ++ GAGGA +A+ + ++ A + I + E+A LA+++
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAILANELPF 167
Query: 347 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
AA D Q + I+ N T +GM+PN D +P++ L+ +V D +Y P K
Sbjct: 168 STKTAAMSISDA-EKQLDTFDIIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNPLK 226
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T+LLK+AEA GA +GV MF+ Q F +T +E M IVL+
Sbjct: 227 TKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVLSTL 276
>gi|427727930|ref|YP_007074167.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
gi|427363849|gb|AFY46570.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
Length = 292
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 152/294 (51%), Gaps = 29/294 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + IY+P + ++L+ + ++ D
Sbjct: 2 ITGTTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYIYLPFPIKPENLEVAIAGLAAIDVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R + + +G NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPIAQAIGAVNTVTRH--NNQWVGTNTDIEGFISPLQTTYQ 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ + TA V+ G GGA RA+ G G A + + + +R K
Sbjct: 120 QD-WSQKTA-----------VILGNGGAARAVVAGCYQLGFAEIHVIGRNPQRLKEFQHS 167
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 395
+ P++++ PE +L N TP+GM+P+ D PVS E + + Q +
Sbjct: 168 WESSPIADNLQVHPWDNLAKLIPEAN-LLVNTTPIGMYPHVDESPVSVEEMANLQTGAIA 226
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +E P + MR+
Sbjct: 227 YDLIYIPQPTKFLQYAQQQGAIAIDGLEMLVQQGVAALKIWLQRETLPVDVMRQ 280
>gi|386738224|ref|YP_006211405.1| shikimate dehydrogenase [Bacillus anthracis str. H9401]
gi|384388076|gb|AFH85737.1| Shikimate dehydrogenase [Bacillus anthracis str. H9401]
Length = 277
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 149/288 (51%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T + MHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTICMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|374299531|ref|YP_005051170.1| shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332552467|gb|EGJ49511.1| Shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
Length = 305
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 141/278 (50%), Gaps = 24/278 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPY 234
G+I P+GHS P+LHN FR V G Y+ PM + L F + + G SV P+
Sbjct: 41 GIIGNPLGHSLSPVLHNWAFREVGVAGTYMAWPMAPESLDDFMAAVLTLPIWGVSVTIPH 100
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
K +MKFC+E+ +A AVNT+ + G L G NTD + + + E G K +
Sbjct: 101 KTGIMKFCEELSGRCRAAGAVNTLHWK--KGLLCGENTDVQGFLAPL----AEIGIKPAS 154
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPF 353
A ++ GAGGA RA+ G + G R + + + E A++L + + +
Sbjct: 155 A-----------LILGAGGAARAVIAGLREWGVRSIHVANRTPEAARTLCNHMRCQGVAW 203
Query: 354 EDILNFQPEKGAILANATPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
E+ Q E +L NATPLGM D P E+ Q+V+D +Y P TR L +A
Sbjct: 204 EERTGVQAE---LLVNATPLGMLGERQDATPWPVESFTRGQIVYDLIYNPIDTRFLVEAR 260
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
AG ++ G+EMFL QA QF L+T +E P + R +V
Sbjct: 261 QAGCAVIPGLEMFLHQAAAQFRLWTDEELPLDGARRLV 298
>gi|452994696|emb|CCQ93699.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 287
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 148/294 (50%), Gaps = 32/294 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++GL PV HS P++ F +N +Y+ + + LK+ +
Sbjct: 7 VDSKTSLYGLFGNPVAHSLSPVMQQAAFMERGFNAVYLAFAIQKEKLKEAVEAIRALSIQ 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYK V+ F DEV A I AVNTI + G+L GYNTD + I ++E+
Sbjct: 67 GVNVTIPYKVEVIPFLDEVEEEASIIGAVNTI--KNEGGRLRGYNTDGKGFIRSLEEEFH 124
Query: 287 -ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
+ NGT + GAGGA R++A +G R+ I + + E+A+ LA
Sbjct: 125 PDWSSMNGT-------------ILGAGGAVRSVAVALARKGVKRITIVNRNREKAEELAR 171
Query: 345 --------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
V G R L+ + +L N TP+GMHP+ + PV++E L +V
Sbjct: 172 LISAWTSVQVEGWER-----LSSTLKGSNLLINGTPIGMHPHVEETPVAQEALHQDLIVS 226
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+ VYTP TRLL++A+ GA I G+ MF+ Q F ++TGK AP M ++V
Sbjct: 227 ELVYTPLYTRLLREAKEKGAKIHPGLMMFVYQGAIAFEIWTGKTAPVNLMEQVV 280
>gi|297616585|ref|YP_003701744.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297144422|gb|ADI01179.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 225
+ ADT+V G+I P+GHS P +HN H+ N +YVP VD+ LK+ +
Sbjct: 2 QVKADTRVLGIIGNPLGHSLSPQMHNRALEHLRLNYVYVPFVVDNHALKEAVDGIRALGI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+KEAV+ + D++ A+ A N + + GKL+GYNTD + +++
Sbjct: 62 DGVNVTIPFKEAVIGYLDDLSEEARWCGAANVV--KNCGGKLVGYNTDGAGFMASLQ--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS 344
E+G G G+ V+ GAGGA RA+ + ++ +V+ + +RA++LA
Sbjct: 117 -EQGVLPG---------GQRVVVLGAGGAARAITYHLVQAEVESLVLINRSVDRAEALAG 166
Query: 345 DVMGAAR-PFEDI------LNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVF 396
++ G P + + L E+ +L N T +GM+P +P + E +V
Sbjct: 167 ELEGIGDVPVKAVGWERACLQEAIEEADLLINTTSIGMYPWIREMPPLDPEWFHPGLVVC 226
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D VY P +TRLL +A G V+GV MF+ Q F L TG AP E MRE+V+
Sbjct: 227 DIVYNPIQTRLLMEASMRGLKTVNGVGMFVHQGALAFQLLTGVAAPLEVMREVVI 281
>gi|428308139|ref|YP_007144964.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
gi|428249674|gb|AFZ15454.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 29/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I P+ HS P++HN H+ + +Y+P + +DL+ + +++ D
Sbjct: 4 IKGTTKLLGVIGSPIEHSLSPVMHNAAITHLGLDYVYLPFPIKPEDLEIAIAGFAAIDLV 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A+M E+ P+AQA+ AVNT+ R + G NTD E I + D
Sbjct: 64 GFSVTIPHKQAIMPLLSEISPVAQAVGAVNTVWRNHNGWS--GTNTDVEGFIAPLRD--H 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS- 344
R ++ A V+ G GGA RA+ G G ++V + + ++
Sbjct: 120 NRNWQESVA-----------VILGNGGASRAVVAGCAQLGFSKVQVVGRNQDKLNQFLDS 168
Query: 345 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 395
DV + +E++ N + +L N TP+GMHP+ + PV E + +
Sbjct: 169 FTNSPLDVNLSVHQWEELPNLI-SQANLLVNTTPIGMHPHVNDSPVDAELMAKLPTDAIA 227
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+D +YTP+ T+ LK A+ GAI + G+EM + Q ++ + P + MR+
Sbjct: 228 YDIIYTPKPTQFLKAAQNFGAITIDGLEMLIYQGAAALKIWLNQPIPVDIMRQ 280
>gi|9087115|sp|O26344.2|AROE_METTH RecName: Full=Shikimate dehydrogenase
Length = 283
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 25/289 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T V G++ P+GHS PI+HN FR + + IYVP V ++LK +
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAV+++ D++H A I AVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTS 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
G G F LA G + + I + E+A+ LA D
Sbjct: 120 VEGSSVLILGAGGAARACAFQLAEKGASD-------------ITILNRTPEKARLLAED- 165
Query: 347 MGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
M FE +++ + IL + TP+GMHP+TD P V E + + +V D V
Sbjct: 166 MADKLGFEASYGGYELIQGSVKSADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLV 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Y P++T LL++AE A AI VSG+ M L Q + F ++TG++ P + M +
Sbjct: 226 YNPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTGRDPPLDVMED 274
>gi|302035827|ref|YP_003796149.1| shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
gi|300603891|emb|CBK40223.1| Shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
Length = 284
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 155/297 (52%), Gaps = 27/297 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-G 227
I T+ G+I PV HS P +HN F+ + + +Y+ V+ L + A G
Sbjct: 3 ITTQTQWCGIIGNPVEHSLSPAIHNAAFQRMGLDLVYLAFRVEALGDALKGVRALGNARG 62
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
FSV P+K A + F DEV P A+ I A+NTI+ +GKL GYNTD ++ A+++
Sbjct: 63 FSVTIPHKVAAIPFLDEVEPTAKHIGAINTIVV--EEGKLKGYNTDASGALRALKEG--- 117
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASD 345
G+ L G ++ G+GGA RA+AF + A + I I+ + L D
Sbjct: 118 ----------GALLDGHRVLILGSGGAARAIAFALATGTGIAGLTILGIEEGERQKLVKD 167
Query: 346 VMGAAR-PFED-------ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 397
+ A P ED + N+ P ++ + TP+GM P D V R V D
Sbjct: 168 LRDKANIPIEDGPLTLDMLRNWVPHVRTLI-HCTPVGMSPRIDESCVPTNLFRPELTVMD 226
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
VY PR+T+LL++A+AAG +SG+EMFL QA+ QF L+T + AP + MR ++ ++F
Sbjct: 227 IVYNPRETKLLQEAKAAGCRTISGLEMFLNQAVLQFELWTKQPAPADVMRRVLESRF 283
>gi|222445470|ref|ZP_03607985.1| hypothetical protein METSMIALI_01109 [Methanobrevibacter smithii
DSM 2375]
gi|222435035|gb|EEE42200.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2375]
Length = 281
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 148/292 (50%), Gaps = 32/292 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 346 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPN-TDRVPVSEETLRDYQLVF 396
V + D ++F IL + TP+GM P+ D V E + +V
Sbjct: 164 VKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVN 221
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 222 DIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|158319101|ref|YP_001511608.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
gi|166988268|sp|A8MEE1.1|AROE_ALKOO RecName: Full=Shikimate dehydrogenase
gi|158139300|gb|ABW17612.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
Length = 286
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 29/298 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I +TK+ G+I +P+ S P +HN F+++N N IY+P V DL K F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VM + DEV A+ I AVNT++ + +GKL+G+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLEDE-- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
G + + FV+AGAGGA R++A GA+ + I + ++A +A
Sbjct: 121 -----------GIYVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQ- 168
Query: 346 VMGAARPFEDI---------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
++G + P I L E+ +L N T LGM+ + + EE + LV
Sbjct: 169 LIGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVV 228
Query: 397 -DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
D +Y P KT+LL+ AE+ G ++G+ M + QA F L+T P +++++ + +
Sbjct: 229 SDLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKKTLFTR 286
>gi|365157945|ref|ZP_09354189.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
gi|363622355|gb|EHL73521.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
Length = 282
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+ HS P +HN F + Y P V +DLKK + GF+V
Sbjct: 3 KLYGVIGDPIAHSMSPAMHNDAFSRLGIPAYYHPFHVKPNDLKKAVEGMKAIGVEGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A++ DE+ PLA+AI AVNT++R+ + + IGYNTD + + RG K
Sbjct: 63 IPHKTAIIPLLDELDPLAEAIGAVNTVVRK--NDRWIGYNTDGDGFV---------RGLK 111
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
+ G L ++ GAGGA RA+ + S R++ I + E+A LA
Sbjct: 112 E---TLGRDLHLDHILIIGAGGAARAIYYTLASEHVRLIDIANRTMEKAARLAEQC---- 164
Query: 351 RPFEDILNF----QPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
PFE N + E+ +I+ T +GM P TD +P+S L+ V D +Y P
Sbjct: 165 -PFETKTNVLSISEAEQRMGNYSIVIQTTSIGMSPKTDEMPLSLSLLKKGTFVSDIIYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T+ L +A+ GAI +G++MF+ Q + F +TG M +IVL +
Sbjct: 224 LETKFLAEAKKQGAITQNGIKMFVYQGVSAFEKWTGVSPDANRMEKIVLEQL 275
>gi|154485097|ref|ZP_02027545.1| hypothetical protein EUBVEN_02820 [Eubacterium ventriosum ATCC
27560]
gi|149734050|gb|EDM50169.1| shikimate dehydrogenase [Eubacterium ventriosum ATCC 27560]
Length = 289
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
+ I T++ GL+ PV HSK P++HN +R + + +Y+ V ++L+ F
Sbjct: 4 ISEITGQTRLTGLLGSPVSHSKSPLMHNEAYRLLGLDYVYLCFDVPENNLQVAFEGLKKL 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ AGF+ P K + K DE+ P A+ I AVNT++ +GK +G+NTD I +++D
Sbjct: 64 NVAGFNCTMPDKTLMSKLVDELSPAAKIIGAVNTVVN--DNGKFVGHNTDGTGYIRSLQD 121
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFERA 339
G + G+ L G+GGA ++ A GAR + I D + +A
Sbjct: 122 C-------------GHNIVGKKMTLLGSGGAASSICVQAALDGAREIDVLSIKDNFWSKA 168
Query: 340 KSLASDVMGAARPFEDILNFQPEK-------GAILANATPLGMHPNTDRVPVSEET-LRD 391
+ L SD+ +++ + IL NATP+GM PNTD V + + LR
Sbjct: 169 EKLVSDINDNTDCKVNLIEMNDDSIGESVFSSDILTNATPIGMAPNTDGCLVKDSSILRP 228
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+V D +Y P +T+L K A+ G + +G+ M L Q F L+TGKE P E ++
Sbjct: 229 ELIVSDIIYNPLETKLYKMAKEKGCSVFNGLYMLLYQGAEAFFLWTGKEMPTEEIK 284
>gi|423099141|ref|ZP_17086849.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|370794376|gb|EHN62151.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 156/304 (51%), Gaps = 41/304 (13%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 5 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 64
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 65 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 112
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 340
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 113 ---LGFASNLRDSGVDMAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 169
Query: 341 -SLAS-------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 386
++AS D+ AA+ E+I IL NAT +GMHP+ + PV +
Sbjct: 170 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKD 224
Query: 387 ETL-RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 445
T+ R +V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P
Sbjct: 225 TTVFRKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSE 284
Query: 446 MREI 449
++++
Sbjct: 285 VKDL 288
>gi|297170988|gb|ADI22003.1| shikimate 5-dehydrogenase [uncultured myxobacterium HF0200_01L06]
Length = 274
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 146/280 (52%), Gaps = 22/280 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+A T + G++ P GH++ P +HN F + + Y+ V DDL+ S +
Sbjct: 5 ISATTALCGILLHPAGHTRSPAMHNAAFEALGIDASYLAFDVHPDDLEAALSGARALGVR 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
++ P+K AV+ DEV +AQAI AVNT+ G+ G NTD ++ A+E +
Sbjct: 65 QLAISLPHKIAVLDHLDEVDSVAQAIGAVNTVTF--DGGRARGTNTDWLGAVEALE---R 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E +P+A + V+ GAGG R++ +G RGA V + ++ A++
Sbjct: 120 E-----------APIAQQHAVVLGAGGTARSVVYGLLQRGATVSV--LNRTEARAEELAA 166
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A+ + + + +L N T +G+ +DR PV+ LR+ +V DAVY P TR
Sbjct: 167 ELGAQQAGPLASLKSTAYDLLVNTTSVGL--RSDRSPVAPSDLREQAVVLDAVYDPETTR 224
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
LL+DA+AAGA V G M + QA Q ++TGKEAP E M
Sbjct: 225 LLRDAQAAGAATVQGKWMLVYQAAEQLRIWTGKEAPLEIM 264
>gi|262181541|gb|ACY29661.1| 3-dehydroquinate dehydratase 01 [Vitis vinifera]
Length = 222
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 98/144 (68%), Gaps = 3/144 (2%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + + IVS +
Sbjct: 72 RPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSH 131
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSV 123
TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H Q VP+I +
Sbjct: 132 NYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVPVIGLVM 191
Query: 124 GERGLVSQLLSPKFNGALVYGSLK 147
GERGL+S++L PKF+G L +GSL+
Sbjct: 192 GERGLISRILCPKFSGYLTFGSLE 215
>gi|16801401|ref|NP_471669.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|16414861|emb|CAC97565.1| lin2338 [Listeria innocua Clip11262]
Length = 289
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 156/304 (51%), Gaps = 41/304 (13%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 63 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 340
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 111 ---LGFASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 167
Query: 341 -SLAS-------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 386
++AS D+ AA+ E+I IL NAT +GMHP+ + PV +
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKD 222
Query: 387 ETL-RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 445
T+ R +V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P
Sbjct: 223 TTVFRKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSE 282
Query: 446 MREI 449
++++
Sbjct: 283 VKDL 286
>gi|330836654|ref|YP_004411295.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
gi|329748557|gb|AEC01913.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
Length = 485
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 205/436 (47%), Gaps = 26/436 (5%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
GGL E KRL + D GA YVD E + + + + G R I S +
Sbjct: 64 GGLCTSTERKRLSLMKEVLDRGAFAYVDLEDDLKKT--EAEQLARRKGIRIIRSHHDFSG 121
Query: 71 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSVGERGL 128
P+ D+ ++R+ A G DI KL + + + ++ R+F++ I +G G+
Sbjct: 122 MPA--DIYARMARILAKG-DIPKLAVTPHTVEDVIRLFRIKDEIPGSTEKIVIGMGVLGI 178
Query: 129 VSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 186
+++L K ++++ + + G+ + L + Y + ++A+T++FG+I PV S
Sbjct: 179 PTRILYRKIGSSMMFCCDEAAESVAPGMLSARVLSEVYGADKVDAETEIFGIIGNPVSQS 238
Query: 187 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
P++HNP FR + N IY VD ++ FF D GFSV P+K V+ + +
Sbjct: 239 ASPLIHNPGFRAIKKNAIYSLFPVDAVRPFFRLADVLDIRGFSVTVPFKRDVIPYLGTIS 298
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF 306
+ I + NT++R K G NTD ++ + AI +G R
Sbjct: 299 REVKQIGSCNTVVRVKDLWK--GINTDYHGFLSQLMPAI-----TSGRV--------RTA 343
Query: 307 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAI 366
++ GAGGA RA+A+ + ++ I + E A+ LA++ M E+I + K +
Sbjct: 344 LILGAGGAARAVAWALHNHSVKITILNRSAEAARKLAAETMAGWDVLENISEYSG-KSDM 402
Query: 367 LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 426
+ T +GM P++D P + ++ +D VY P +TR L A AG ++ G +M L
Sbjct: 403 IVQTTSVGMTPDSDEDPSAGYVFSGKEIAYDLVYKPHQTRFLLRAAEAGCEVIYGAQMLL 462
Query: 427 RQAIGQFNLFTGKEAP 442
Q QF FTG P
Sbjct: 463 EQGKLQFEAFTGYHYP 478
>gi|260892556|ref|YP_003238653.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
gi|260864697|gb|ACX51803.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
Length = 297
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 27/293 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ +T++ G+ P+ H+ P +HN FR +N N IYVP +V ++L + + + +
Sbjct: 2 QIDGNTRIVGIFGDPIAHTLSPHMHNAAFRALNLNYIYVPFWVRREELAEATAAIRALNL 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AG +V P+KEA++ + DE+ A I AVNT++ + GKL G NTD + A++
Sbjct: 62 AGVNVTVPHKEAIIPYLDELEEEACLIGAVNTVVNQ--GGKLWGSNTDASGFLAALQ--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA-- 343
E G+ +P ++ VL G A A+S+ + F+ F+RA LA
Sbjct: 117 -EEGF--------APAKKKVAVLGAGGAARAVGVALARSQVEEITFFNRTFDRAAELAAY 167
Query: 344 ----SDVMGAARPFEDILNFQP----EKGAILANATPLGMHPNTDRVP-VSEETLRDYQL 394
+ V A P+E++ +F+ + ++ T LGMHP +P V+EE R QL
Sbjct: 168 LEERTGVRARALPWEEMGSFRGIEFLQAADLIVQTTSLGMHPREGEMPPVAEEAFRPGQL 227
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
V D VY P KTR L A+ GA SG+ M L Q F+L+TG AP E MR
Sbjct: 228 VIDLVYRPLKTRFLSLAQKRGAKTASGLGMLLYQGALAFSLWTGVPAPLEVMR 280
>gi|148643239|ref|YP_001273752.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
gi|166219474|sp|A5UMF6.1|AROE_METS3 RecName: Full=Shikimate dehydrogenase
gi|148552256|gb|ABQ87384.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
Length = 281
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 148/292 (50%), Gaps = 32/292 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 346 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPN-TDRVPVSEETLRDYQLVF 396
+ + D ++F IL + TP+GM P+ D V E + +V
Sbjct: 164 LKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVN 221
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 222 DIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|226311576|ref|YP_002771470.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|254806733|sp|C0ZB07.1|AROE_BREBN RecName: Full=Shikimate dehydrogenase
gi|226094524|dbj|BAH42966.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 283
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 22/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I + T++ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSL---VE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEH 167
Query: 346 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
V G P + + + E ++L N T +GM PN PV E L V D +Y
Sbjct: 168 V-GMIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYN 226
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLLK+A A GA + SG+ MF+ Q F L+TG++AP MRE+VL +
Sbjct: 227 PLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVVLQQL 279
>gi|20093378|ref|NP_619453.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
gi|24211500|sp|Q8THC3.1|AROE_METAC RecName: Full=Shikimate dehydrogenase
gi|19918745|gb|AAM07933.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
Length = 280
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 146/293 (49%), Gaps = 35/293 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ PVGHS P +HN F + + IY V ++L+K + F G ++
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKER 288
P KE +K D + P LA+ I AVNT++ + G++ GYNTD + A+ E A++ R
Sbjct: 63 VPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVEIR 120
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G K A G F LA + GA + + + ERA LA DV
Sbjct: 121 GSKVVVAGAGGAARAVAFQLA--------------ADGAEITVVNRTEERAVELAKDVAA 166
Query: 349 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A+ P +++L IL N T LGMHPNTD + E L VFD
Sbjct: 167 ASLPGKINGTGLSGLKELLR----DADILINTTTLGMHPNTDTTIATAEELHSGLTVFDI 222
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VY P +TRLLK+A+ AGA VSGV M + Q F L+TG EAP E M++ VL
Sbjct: 223 VYNPLETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKKTVL 275
>gi|410668003|ref|YP_006920374.1| shikimate dehydrogenase [Thermacetogenium phaeum DSM 12270]
gi|409105750|gb|AFV11875.1| shikimate dehydrogenase AroE [Thermacetogenium phaeum DSM 12270]
Length = 301
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 145/292 (49%), Gaps = 24/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TKVF L PVGHS P++ N F + YVP+ V D L + +
Sbjct: 5 IGGQTKVFALYGDPVGHSLSPVMQNRAFAACGLDCCYVPLRVKRDGLATAVAAIRALGLG 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAI 285
G ++ P+KE+V+K+ DEV A+ I AVN ++RR + +L GYNTD + ++ E+A
Sbjct: 65 GVNITIPHKESVLKYLDEVDREAELIGAVNAVVRR--ENRLCGYNTDAAGFLRSLREEAG 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 345
E K A + GGA + + + D RA++LA+D
Sbjct: 123 FEATGKKAVVLGAGGAARAVAFALAIGGA------------VSLSVINRDPGRARTLAAD 170
Query: 346 V------MGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
+ AA F D L + KGA ++ NATP+GM P+ P+ E L LV D
Sbjct: 171 LERKTGCCTAAGSFHDGLLEEALKGADLVVNATPVGMFPDCHSSPIPAEKLPPGILVCDL 230
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
VY P +T+LL DA AAG +++GV M + Q F L+TG EAP MRE V
Sbjct: 231 VYNPIRTKLLADAAAAGCRVLNGVGMLVAQGALAFELWTGIEAPVAAMREAV 282
>gi|398818042|ref|ZP_10576641.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
gi|398028840|gb|EJL22343.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
Length = 283
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I + TK+ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTKLVGLFGHPVSHSQSPMMHNTAFSETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSL---VE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
E G L ++ + GAGGA RA+AF +G R + I + ERA LA
Sbjct: 117 ETGIV---------LEKQVVTMVGAGGAARAVAFTLAEQGVREIRIINRSRERAAVLAEH 167
Query: 346 VMGAARPFEDILNFQPEKGA------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
V G P + + Q E A +L N T +GM PN PV E L V D +
Sbjct: 168 V-GTIVPTKIV--EQGEGAAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLI 224
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +TRLLK+A A GA + SG+ MF+ Q F L+TG+ AP MRE+VL +
Sbjct: 225 YNPLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGERAPTGVMREVVLQQL 279
>gi|325958381|ref|YP_004289847.1| shikimate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329813|gb|ADZ08875.1| Shikimate dehydrogenase [Methanobacterium sp. AL-21]
Length = 286
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 26/296 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T VFG+I PV HS P +HN F+ + + IYVP V + L+ S
Sbjct: 2 ITGKTNVFGIIGDPVEHSLSPGMHNAAFKELGMDNIYVPFQVKAEHLEDAILGAQSLGVK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K V+ + D + A I AVNTI +G+NTD ++ AIE+
Sbjct: 62 GFNVTIPHKTEVINYLDYLDIAAGLIGAVNTI--EFGKNGAVGHNTDGIGAVMAIEEV-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
+P+ + V+ GAGGA RA+AF G +VI + E+A L +D
Sbjct: 118 ------------TPVKNKKVVILGAGGASRAIAFQLLLSGVDNLVIANRTVEKAGELKTD 165
Query: 346 VMGA------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDA 398
++ ++ L + AIL N TP+GM+PN D PV + E + +V D
Sbjct: 166 LVEKLDHEVRVSGLDENLTQELSDTAILINTTPVGMYPNVDEKPVVTAEMMHPDMVVNDI 225
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
VY P KT LL +A+ AGA +SG++M + Q + F ++TG E P E + ++ +
Sbjct: 226 VYNPLKTGLLNEADKAGAKSISGIKMLMYQGVEAFKIWTGIEPPVEIFQRALMNEL 281
>gi|389853036|ref|YP_006355270.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
gi|388250342|gb|AFK23195.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
Length = 273
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 150/286 (52%), Gaps = 23/286 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDFA 226
+N +TKV+ +I KPV HS P++HN F+ N +YV +F + L+ + A
Sbjct: 1 MNGETKVYAVIGKPVRHSLSPVMHNALFKKYGINAVYVAFEVFPEQLRDAILGVRALGIA 60
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++++ D+V P ++AI++VNT+I S+G+LIGY TD + A+E
Sbjct: 61 GLNVTMPHKEKIIEYLDKVSPDSKAISSVNTVIN--SNGELIGYTTDGTGARKALE---- 114
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-D 345
F + R+ +L G AK + VV+ + E+A++L
Sbjct: 115 ---------RFTNVEGSRVLILGAGGAGKAIAYELAKY--SDVVVLNRTPEKARALEKFG 163
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ G A E+ L++ E IL NAT +GM VP +E LR+ +V D VY P KT
Sbjct: 164 IKGDALTMEN-LSYYIEWADILINATSVGMGKYESLVP--KELLREGLVVMDIVYKPIKT 220
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+LLKDAE AG + V G+ M + Q F L+TG E MR + L
Sbjct: 221 KLLKDAEKAGCLTVDGLWMLVYQGAESFKLWTGIHPDVELMRRVAL 266
>gi|334137627|ref|ZP_08511056.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
gi|333604791|gb|EGL16176.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
Length = 289
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 24/295 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++G+ PV HS+ PI+ N F NG Y V + L++ + + F
Sbjct: 7 LDSGTILYGVFGDPVRHSRSPIMMNRAFGEAGINGAYAAFHVLPEQLEEAVAGIRALGFG 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VMK+ DE+ AQA+ AVNT++ R GKLIGYNTD + ++++
Sbjct: 67 GVNVTIPHKVNVMKYLDEIDADAQALGAVNTVVNR--GGKLIGYNTDGIGYVRSLKE--- 121
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
G L G+ +L GAGGA R +++ AK + + I + E+A+ LAS
Sbjct: 122 ---------ETGMDLRGKKVLLIGAGGAARGISYALAKEGPSFIAIANRTAEKAQELAST 172
Query: 346 VMGAARP----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE--TLRDYQLVFDAV 399
V ++ N + I+ N+T GM+PN + +P+ + LR+ +V D V
Sbjct: 173 VRAETSAVGMGLHELGNIISDADLII-NSTSSGMYPNIEEMPLDLDGHRLREGAVVSDLV 231
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +TR LK+A+A GA+ G+ MF+ Q F +TG AP MR+ V F
Sbjct: 232 YNPLETRFLKEAKARGAVTHGGLGMFIYQGAYAFEYWTGVPAPAAAMRQAVEQSF 286
>gi|18978065|ref|NP_579422.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|397652658|ref|YP_006493239.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
gi|24211503|sp|Q8U0A6.1|AROE_PYRFU RecName: Full=Shikimate dehydrogenase
gi|18893854|gb|AAL81817.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|393190249|gb|AFN04947.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
Length = 271
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 138/285 (48%), Gaps = 22/285 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-DLKKFFSTYSSPDFAG 227
IN +TK++G+I PV HS PI+HN F+ N IYVP V DLK + + D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
+V PYKE V+KF DE+ +Q I +VNT++ +GKL+GY TD + A+E
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVNL--EGKLVGYTTDGIGARRALE----- 114
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
F + +L G S+ A VV+ + E+AK L
Sbjct: 115 --------RFTQVDGANILILGAGGAGKAIAY--ELSKVANVVVLNRTIEKAKRLEK--F 162
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
G + L + E IL NAT +GM+ VP + LR +V D VY P T L
Sbjct: 163 GIVGDSLEALPYYVEWADILINATSVGMNEEKSLVP--KNLLRPGLVVMDIVYKPLNTLL 220
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
L+ A+ G I + G+ M + Q F L+TG+E E MR + LA
Sbjct: 221 LRYAQEKGCIAIDGLWMLVYQGAESFRLWTGEEGDVELMRRVALA 265
>gi|312137431|ref|YP_004004768.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
gi|311225150|gb|ADP78006.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
Length = 281
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TKV G+I PV HS P++HN F + + +YVP V ++LK + +
Sbjct: 2 ITGKTKVVGVIGDPVEHSLSPVMHNAAFEYYGLDYVYVPFHVKKENLKDAIKGSKALNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K V+K+ D + A+ I A+NTI + D + G+NTD + ++ A+++ +
Sbjct: 62 GLNVTIPHKRNVIKYLDWIDDAAKLIGAINTI--KFEDDGIKGFNTDGKGAVMALKEVTE 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ K G F LA G + I + E+A+ LA D+
Sbjct: 120 IKNKKILILGAGGAARAVAFQLALEGAK-------------NICILNRTVEKAEELAKDI 166
Query: 347 -----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 400
+ +++ + + IL +ATP+GM+PN ++ P V E + + +V D VY
Sbjct: 167 NKKTGVKTNSGSLELIEKEIKDTDILIDATPVGMYPNVNQEPLVKAEMMHENLIVNDLVY 226
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P KT LLK+AE AGA +SGVEM + Q F ++TG EAP + MR+ VL +
Sbjct: 227 NPIKTTLLKEAEKAGAKTISGVEMLVYQGAEAFKIWTGMEAPIDVMRQSVLKEL 280
>gi|386044549|ref|YP_005963354.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404411543|ref|YP_006697131.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|345537783|gb|AEO07223.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404231369|emb|CBY52773.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC5850]
Length = 289
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|325570234|ref|ZP_08146100.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325156717|gb|EGC68891.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 292
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 6 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 65
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 66 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 122
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDF 336
+ G+ + GAGGA A+ A G + + + I
Sbjct: 123 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKDEFYPIIQ 170
Query: 337 ER----AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 391
E+ A+ AS++ + L ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 171 EKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRE 230
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TG+E P E ++ ++
Sbjct: 231 SLAVYDIIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFKLWTGQEMPVEKVKALI 289
>gi|284802683|ref|YP_003414548.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284995825|ref|YP_003417593.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404414320|ref|YP_006699907.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|284058245|gb|ADB69186.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284061292|gb|ADB72231.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404240019|emb|CBY61420.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC7179]
Length = 289
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP-----MFVDDLKKFFSTYSSP 223
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|257457569|ref|ZP_05622736.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
gi|257444955|gb|EEV20031.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
Length = 496
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 200/451 (44%), Gaps = 54/451 (11%)
Query: 12 GGLYEGDEHKRL----EALHLAEDLGAD---YVDFELKVASNILGKQYSSHQSGTRFIVS 64
GG ++G E R+ L A+ D Y+D E V + L + + G I+
Sbjct: 67 GGQFKGGEGSRITLFARGLAFADTDPLDNFAYLDLESDVQAPSLEEAAQAFNIG---IIR 123
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 124
+TP + D+ + ++ T +I+K+ + +++ E+ +F+ ++G
Sbjct: 124 SIHSIKTPIK-DIAAKIREIRRTDEEIVKIAYKADNLAEVTALFKQAQQLNGQNTLIAMG 182
Query: 125 ERGLVSQLLSPKFNGALVYGSLK---GTPVLGLPTVE--SLRQTYKVEHINADTKVFGLI 179
+ G+ S++L+PK + + VY + L ++ +L + Y+ IN T ++G+
Sbjct: 183 KYGIPSRILAPKLHSSFVYTMPREYIAKYHLEQEYIDPITLTELYRFRAINDQTGIYGVA 242
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
S P +HN F N +Y+P+ ++++ AG S+ P+K V+
Sbjct: 243 GADTTKSLSPAIHNRGFEKKELNAVYIPISGTNIQEVIEFAKCTGIAGLSITHPFKFDVI 302
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
F D + P++ A AVNT++ + GK G NTD + I A+++ + R
Sbjct: 303 PFLDSLGPVSTACGAVNTVLF--NGGKRQGLNTDIDGFIRALQEFLHVRN---------- 350
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 359
L + + G GGA A+A + +F E+AK LA D NF
Sbjct: 351 -LRFKHVAIIGTGGAAHAIANAVHQLHGKACVFGRSAEKAKKLA-----------DRYNF 398
Query: 360 QPE------------KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
Q E I+ +T +GMH D P+ + + VFD +Y P KT L
Sbjct: 399 QWEILDLASVRILKKYSEIIIQSTSVGMHEGED--PLEFYSFSGNEKVFDVIYVPEKTTL 456
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
LK AEAAG I +G +M QA QF LFTG
Sbjct: 457 LKRAEAAGCHICNGYDMLRYQAYKQFELFTG 487
>gi|402300002|ref|ZP_10819555.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
gi|401724793|gb|EJS98122.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
Length = 282
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
KV+GL PVGHS PI+H F+ + Y V D +++ + + G +V
Sbjct: 3 KVYGLFGYPVGHSMSPIMHEAAFKELGQKANYHAFNVKPDKIEEAVMAIRALELGGCNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K VM + DE+ P A I AVNTI+ + GKL G+NTD RGY
Sbjct: 63 IPHKVNVMNYLDEIDPEAAEIGAVNTIVNQ--GGKLKGFNTDG-------------RGYL 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDID-------FERAKSLA 343
L G+ + GAGGA RA+ +R+V+ + ER KS A
Sbjct: 108 QSLLEIAHTLEGKSVAIIGAGGAARAIVTVLVHESVSRLVVANRTKIKAEQLIERHKSKA 167
Query: 344 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
++ +G E L ++ I+ N T +GM PNTD P+S L+ +V D +Y P
Sbjct: 168 TE-LGVMDMRE--LEYELASFDIIINTTSVGMSPNTDECPLSLNNLKKETIVSDLIYNPL 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
KT+LL +AE+ GA +++GV MF+ Q F +TG + ++ M +IVL +
Sbjct: 225 KTKLLIEAESRGAKVLNGVGMFVNQGALSFEYWTGLKPDRKVMTKIVLEQL 275
>gi|239827796|ref|YP_002950420.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
gi|259585283|sp|C5D4W2.1|AROE_GEOSW RecName: Full=Shikimate dehydrogenase
gi|239808089|gb|ACS25154.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
Length = 277
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++ L PV HS PI+HN F+++N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AVM DEV P A+ I AVNTI+ R +G+LIGYNTD + A+E+ I
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEIN----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
+ + +L GAGGA R + RGA+ + I + +AK L + +
Sbjct: 116 -------VDIKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
LN E+ IL N T +GM+PN + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSVVYSLNEAEERLGEYDILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKW 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A II +GV MF+ Q F +TG + M++IV+ +
Sbjct: 229 LKEARKRNGIIQNGVGMFVYQGALAFEKWTGIFPDVQRMKKIVIEQL 275
>gi|422416778|ref|ZP_16493735.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
gi|313622721|gb|EFR93071.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
Length = 289
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 152/299 (50%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG---------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 340
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 111 ---LGFASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAQEITIFNIKDDFYEKAK 167
Query: 341 -SLAS------DVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL-R 390
++AS D + D E IL NAT +GMHP+ + PV + T+ R
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDTAKLHEEIATSDILVNATLVGMHPHENETPVKDTTVFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KTRLL DAEAAG+ V G+ M L Q + LFTGK+ P ++++
Sbjct: 228 KDLIVTDVVYNPKKTRLLLDAEAAGSKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|441472052|emb|CCQ21807.1| Shikimate dehydrogenase [Listeria monocytogenes]
gi|441475188|emb|CCQ24942.1| Shikimate dehydrogenase [Listeria monocytogenes N53-1]
Length = 283
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I+ T++ GLI PV HSK PI++N +F+ + Y+ +K + + G
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTIKAI----KTFNLRGA 60
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
+V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + DA
Sbjct: 61 NVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA---- 114
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK---- 340
+AG+ + GAGGA A+ GA+ + IF+I +++AK
Sbjct: 115 ---------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAA 165
Query: 341 SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDYQL 394
S+ +V D+ LN + IL NAT +GMHPN P+S+ ++ R +
Sbjct: 166 SIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELI 225
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTG++ P ++++
Sbjct: 226 VADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 280
>gi|451822103|ref|YP_007458304.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788082|gb|AGF59050.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 145/299 (48%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK--KFFSTYSSPD 224
+ I+ T ++ LI PV HS P ++N +F+ + + YV + + K + + + +
Sbjct: 3 KRISGSTALYCLIGSPVDHSGSPAMYNYSFQKLGIDSAYVAFDISEEKVSDAIAAFKTLN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ DE+ P A+ I AVNTII + GKL G+ TD
Sbjct: 63 IRGANVTMPCKSEVVKYMDELSPAARIIGAVNTIINK--SGKLTGHITD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID-------- 335
G+ G + G++ + GAGGA A+ GA+ + IF+I
Sbjct: 110 --GVGFVRNLKEHGVDIKGKIITVLGAGGAATAIVVQCALDGAKEINIFNIKDAFYQKAE 167
Query: 336 --FERAKSLASDVMGAARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 391
E K + + ED LN Q IL NAT +GMHPN + P+ + +
Sbjct: 168 KTIENIKKEVPECVVNLCDLEDTQKLNGQIAASDILVNATRVGMHPNEEESPIKDTNVFT 227
Query: 392 YQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+LV D VY PRKT+LL+DAEA G IV G+ M L Q F L+TG E P + + E+
Sbjct: 228 KELVVADVVYNPRKTKLLEDAEAVGCTIVPGIGMLLWQGAEAFKLYTGLEMPADEVNEL 286
>gi|254826875|ref|ZP_05231562.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258599255|gb|EEW12580.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 289
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTG++ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|290893185|ref|ZP_06556173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404408677|ref|YP_006691392.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|290557347|gb|EFD90873.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404242826|emb|CBY64226.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2376]
Length = 289
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 150/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP-----MFVDDLKKFFSTYSSP 223
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S ++
Sbjct: 167 KQTVASIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 227 RKELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|452975134|gb|EME74953.1| shikimate 5-dehydrogenase [Bacillus sonorensis L12]
Length = 278
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++GLI PV HS P +HN + ++ +G Y V DDL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLDGYYHAFRVENDDLEDAVKGMRALGIQGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K A+MK+ D + A+ + AVNT+ R + L+GYNTD E + +++
Sbjct: 64 PHKVAIMKYLDRIDESARVLGAVNTVRREKEE--LVGYNTDGEGFLKSLK---------- 111
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
S P++ ++ GAGGA RA+ A R R+ + + E+A++ G +
Sbjct: 112 --PSLDKPVSELSILIIGAGGAARAIFTTLASERPKRLDVANRTPEKAEAFIQLYSGQTK 169
Query: 352 PF-----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
E+ L E +L T +GMHP+ D VP+S ++ LV D +Y P KT
Sbjct: 170 AVSLAEAEEHL----EAYDVLIQTTSVGMHPHVDDVPLSLARAKETCLVCDIIYNPLKTA 225
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LLK+AEA G ++GV MF+ QA F L+TG E E M+ IVL K
Sbjct: 226 LLKEAEAKGLHTLNGVGMFIGQAALSFGLWTGHEPDMEKMKSIVLRKL 273
>gi|428207318|ref|YP_007091671.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428009239|gb|AFY87802.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
Length = 294
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P +HN H+ + +Y+P+ V +DL +++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPAMHNAAIAHLGLDYVYLPLPVKPEDLAAALQGFAAIGLV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+ P+K+A++ F EV P+AQA+ AVNT+ R +D G NTD E + + ++
Sbjct: 62 GFNATIPHKQAILPFLSEVSPVAQAVGAVNTVWR--TDEGWAGTNTDVEGFLAPL---LE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVI----------FDID 335
+ K+ + SP + ++ V+ G GGA RA+ G G A + + F
Sbjct: 117 KSKVKSQKSKIDSPDSPQIAVILGNGGAARAVVAGCSQLGCAEICVVGRNEVKLQEFYTS 176
Query: 336 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS---EETLRDY 392
+ ++ A+ + D++ + +L N TP+GM+P+ DR P+S L+
Sbjct: 177 WSNSQVQANLQVYTWDKLPDLI----ARADLLVNTTPIGMYPHVDRSPLSLSEMAVLKQG 232
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ +D +YTPR T L+ A+ GA + G+EM ++Q ++ + P E MR+
Sbjct: 233 AIAYDLIYTPRPTLFLQQAQQQGARTIDGLEMLVQQGAAALKIWLQQPVPVEIMRQ 288
>gi|17229549|ref|NP_486097.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
gi|24211460|sp|Q8YVC1.1|AROE_ANASP RecName: Full=Shikimate dehydrogenase
gi|17131148|dbj|BAB73756.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
Length = 289
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 29/297 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
R + A V+ G GGA RA+ G G A + + + +R +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 395
+ ++ + P+ +L N TP+GM+P D P+S E L + Q +
Sbjct: 168 WENSPIAENLQVHTWDYLAKLIPQAN-LLVNTTPIGMYPQVDESPLSAEELVNLQTGTIA 226
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 451
+D +Y P+ T+ L+ A+ GAII+ G+EM ++Q + ++ + + P + MR+ ++
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIIIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQALI 283
>gi|46446516|ref|YP_007881.1| 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphat e synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400157|emb|CAF23606.1| putative 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphate synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 939
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 49/461 (10%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R K GG + G+ K+ D+VD E + L ++ T++I+S +
Sbjct: 77 RKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWL-QELQKISPQTQWIISWH 135
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS----HCQVPIIAYS 122
ETP L + ++ A + KL + I + ++ ++ H + +
Sbjct: 136 EVKETPH---LKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQENKHSR-RLCTIG 191
Query: 123 VGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHINADTKVFGL 178
+G +G +++L+P + SLK P G + ++L QTY+ + ++ T++FGL
Sbjct: 192 LGMKGQCTRILAPVTGQPFTFASLKEGLESAP--GQISFQTLFQTYRFKKLSQQTEIFGL 249
Query: 179 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKE 236
I P+ S + HN H+N N +Y+ V++ L+ FF GFSV P+KE
Sbjct: 250 IGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPHKE 309
Query: 237 AVMKFC-----DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA--IEDAIKERG 289
V K DE H A NT++ S + G NTD ++ A +ED
Sbjct: 310 RVKKILALNMDDESH------LACNTLLF--SSSIINGTNTDGIGALKALKVED------ 355
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
L + +L GAGG +A+A+ AK RGA V I + RAK +A +
Sbjct: 356 -----------LKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKIQVK 404
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
FE + + + IL T +GM P+ D + VS + + D + P +T L+
Sbjct: 405 WGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQ 464
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
A G I G+E+F+ QA QF + K+ ++ + + +
Sbjct: 465 KARLKGCEIHHGIELFIHQAAFQFGFWFNKQFDQKLIEQTI 505
>gi|150388897|ref|YP_001318946.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|166988267|sp|A6TM69.1|AROE_ALKMQ RecName: Full=Shikimate dehydrogenase
gi|149948759|gb|ABR47287.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 286
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 27/297 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ GL+ PV HS P++HN F+H+ + +Y+ V D+LK+ + D A
Sbjct: 5 ISGYTRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVA 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K+ ++ DE+ A+ I +VNT++ + +G L GYNTD
Sbjct: 65 GFNVTMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDG------------ 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
+GY G A G G+ V+AGAGGA +++A GA+ + I + E A+ + +
Sbjct: 111 -KGYVMGLADEGISPEGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNI 169
Query: 346 V-------MGAARPFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 396
+ +A +ED L Q ++ + N T LGM + ++ +S + L +V
Sbjct: 170 INKNIPTCKTSATGYEDNELKQQLKEADLFINCTNLGMGSHEEKSIISSTDILHPDLIVS 229
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
D VY P KT+LL AE G ++G+ M + Q F L+TG++ P E+++ I+L+K
Sbjct: 230 DVVYAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK 286
>gi|386054491|ref|YP_005972049.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346647142|gb|AEO39767.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 289
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|430750627|ref|YP_007213535.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
gi|430734592|gb|AGA58537.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
Length = 294
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 27/304 (8%)
Query: 160 LRQTYKVEH---INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLK 214
+ QT E I++ T ++G+I P+ HSK P++ + FR N +Y+ V + L
Sbjct: 1 MNQTTAAEAGPAIDSHTVLYGVIGDPIRHSKSPVMLSRAFRETGVNAVYLAFHVTAERLA 60
Query: 215 KFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC 274
F + GF+V P+K A+M DE+ P A+A AVNT++RR + KLIGYNTD
Sbjct: 61 AFAEGARAMGMGGFNVTIPHKTAIMAHLDEIDPTAEAAGAVNTVVRR--EDKLIGYNTDG 118
Query: 275 EASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFD 333
+ ++++ G+ L+GR V+ GAGGA R + A + A + + +
Sbjct: 119 IGYVRSLKE------------EAGAELSGRRIVVLGAGGAARGILHALALEKPAHIAVVN 166
Query: 334 ----IDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP--VSEE 387
A++L +DV AA +D+ + I+ N T GM PNTD +P +
Sbjct: 167 RTAARAEALAQALPADVPKAALGPDDLREACADAD-IVINTTSAGMSPNTDELPLGIDAS 225
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
++ + D VY P +TR L++AE AG G+ MF+ Q F +TG+ AP MR
Sbjct: 226 WMKPGAVASDIVYNPMRTRFLEEAERAGCRTHGGLGMFIYQGAYAFEYWTGQAAPVAAMR 285
Query: 448 EIVL 451
E V+
Sbjct: 286 ETVI 289
>gi|47096854|ref|ZP_00234434.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|254912797|ref|ZP_05262809.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937124|ref|ZP_05268821.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386047892|ref|YP_005966224.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47014773|gb|EAL05726.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|258609726|gb|EEW22334.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293590792|gb|EFF99126.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534883|gb|AEO04324.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 289
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL D+E AG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDSEVAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|408419445|ref|YP_006760859.1| shikimate dehydrogenase AroE [Desulfobacula toluolica Tol2]
gi|405106658|emb|CCK80155.1| AroE: shikimate dehydrogenase [Desulfobacula toluolica Tol2]
Length = 281
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 27/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I++ TK++ + KPV HSK P++HN F+ + N +Y+ +D++ + + G
Sbjct: 2 IDSKTKLYCIFGKPVTHSKSPLIHNACFQKHHMNSVYLAFEIDEISDGVKAMRTLNIKGA 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
SV P+KE++MK+ DE+ A +I AVNT++ R +GKLIGYNTD +A+++ + R
Sbjct: 62 SVTIPFKESIMKYLDEIDEEALSIGAVNTVVNR--NGKLIGYNTDYKAAVSPL------R 113
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS---- 344
+ + ++ ++ G A K +G ++VI + + ER K LAS
Sbjct: 114 PF--------CIMNKKVCIIGAGGAAQAVAYGIHKEKG-KLVIINRNKERGKKLASKYNA 164
Query: 345 -----DVMGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
D M +D +N A I+ N T +GM P+ + L +V D
Sbjct: 165 EFISMDKMNQTEINKDAINKTGIINADIIINTTSIGMSPDIETCAFPSTLLDSRMIVMDI 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VYTP KT+LL A++ G + G+ MFL Q QF L+T + MR+ ++
Sbjct: 225 VYTPLKTKLLSIAQSKGCTTIDGLSMFLHQGAAQFKLWTDILPDIKLMRQTII 277
>gi|315283346|ref|ZP_07871557.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
gi|313612994|gb|EFR86925.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
Length = 289
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 31/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF--VDDLKKFFSTYSSPDFA 226
I+ T++ GLI P+ HSK P+++N +F+ + Y+ ++ + S + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPVMYNYSFQKAGLDYAYLAFDTPIEKVADAISAIKTFNLR 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K V+K+ D++ P A+ I AVNTI+ +GKL G+ TD + + DA
Sbjct: 65 GSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVANLRDAHV 122
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 340
+ +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 123 D-------------VAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQT 169
Query: 341 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 392
S+ +V D+ LN + IL NAT +GMHPN P++ ++ R
Sbjct: 170 ITSIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRKE 229
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT+LL DAEAAG IV G+ M L Q + LFTG++ P ++++
Sbjct: 230 LIVTDIVYNPKKTKLLLDAEAAGCKIVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|406664822|ref|ZP_11072597.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
gi|405387670|gb|EKB47094.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
Length = 299
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 155/305 (50%), Gaps = 36/305 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA 226
I+ TK+ GL++ P+GHS P +HN + + +NY + + ++L++ + + A
Sbjct: 9 IDGKTKLVGLLATPIGHSLSPRMHNLGYSLKGLNYAYLAFEVGNEELEETVKGFKAAGVA 68
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K V+ + DE+ A+ A NT++ R DGKLIGYNTD
Sbjct: 69 GFNVSMPNKMKVLDYLDELDDSAKYSRASNTVVNR--DGKLIGYNTDG------------ 114
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKSL 342
GY G L G+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 -LGYIRNLIEHGVELKGQKVTLVGSGGAATPIAIQFAQSGIREISIFARNDQFFGQAEEN 173
Query: 343 ASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL-- 389
+ + + P ED +F+ E + AILAN T LGM P D + + +ETL
Sbjct: 174 VNYINNEMKEFGVKANIFPLEDKESFRREVAESAILANGTSLGMKP-LDHLSIVDETLDV 232
Query: 390 -RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
R +V D VY P+K++LL AE AG +++G+ M L Q F LFTG++ P E ++E
Sbjct: 233 LRKDLVVTDVVYNPQKSKLLTQAEEAGCTVINGLGMMLWQGALGFKLFTGEDMPIEEIKE 292
Query: 449 IVLAK 453
I+ +
Sbjct: 293 IMFGE 297
>gi|16804275|ref|NP_465760.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|386051212|ref|YP_005969203.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404284734|ref|YP_006685631.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|405759288|ref|YP_006688564.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|16411706|emb|CAD00314.1| lmo2236 [Listeria monocytogenes EGD-e]
gi|346425058|gb|AEO26583.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404234236|emb|CBY55639.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2372]
gi|404237170|emb|CBY58572.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2479]
Length = 289
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP-----MFVDDLKKFFSTYSSP 223
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|422810317|ref|ZP_16858728.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378751981|gb|EHY62569.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 289
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 152/298 (51%), Gaps = 33/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DF 225
I+ T++ GLI P+ HSK PI++N +F+ + Y+ F ++K T + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLA-FDTPIQKVADTIKAIKIFNL 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K D++ P A+ I AVNTI+ +GKL G+ TD I + DA
Sbjct: 64 RGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFIANLRDA- 120
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 340
+ +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 121 ------------SADVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQ 168
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 391
S+ +V D+ LN + IL NAT +GMHPN P++ ++ R
Sbjct: 169 TVTSIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRK 228
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 229 ELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|334341634|ref|YP_004546614.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
gi|334092988|gb|AEG61328.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
Length = 293
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 148/293 (50%), Gaps = 23/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+N TK+ GL PV HS P +HN F + N +YVP + D LK+ + +S
Sbjct: 6 LNGKTKICGLFGFPVEHSFSPAMHNAAFEELGLNWVYVPFCISPDRLKQAMQSITSLGLT 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K+AV+ DE+HP A I AVNTI+ G+L+G+NTD + ++ D
Sbjct: 66 GINVTVPHKQAVLPLLDEIHPTAGIIGAVNTIVN--DQGRLVGHNTDGAGFVKSLTD--- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD- 345
E G+ SP + +L G A A S + I + +A++LA D
Sbjct: 121 ETGF--------SPRGQGVLILGAGGAARAVAVQLALSGAGPLYIANRSPAKAEALARDL 172
Query: 346 -----VMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
V AA P+ ++ + + ++ TP+GM P ++ P + +R Q+V D
Sbjct: 173 QQATGVRAAALPWGRELPQEKVNEVGLVVQTTPMGMAPKAEQCPDFPFQAIRTGQVVCDL 232
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+Y P +T LK+A GA+ ++G+ M L Q + F L+TGK AP MRE +L
Sbjct: 233 IYNPGQTLFLKEAAVRGAVPLNGLGMLLYQGVLAFELWTGKTAPVAVMREALL 285
>gi|300087348|ref|YP_003757870.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527081|gb|ADJ25549.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 276
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 182 PVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
PV HS P +HN + + +Y+ V L + + G ++ P+K A +
Sbjct: 15 PVAHSVSPAMHNAAIDRLGLDYVYLAFRVTPAGLAGALNGVRALGIRGVNLTIPHKTAAL 74
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
DEV A+ + AVNT++ G+L GYNTD I A+K+ G+ +
Sbjct: 75 GLLDEVDEAARRVGAVNTVVN--DAGRLTGYNTD----IAGFLAALKKHGF--------A 120
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA-RPFEDILN 358
P AG+ V+ GAGGA RA+ F + GA VVI + E+A +LA+D A E L
Sbjct: 121 P-AGQKAVVLGAGGAARAVVFALRDAGAEVVIANRSIEKADTLAADTGATAVSTTETELQ 179
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
+ +L NATP+G+ P+T PV L VFD +Y PR+TRLL +AEAAG +
Sbjct: 180 KALDGAGLLVNATPVGLFPDTGVTPVPGSLLHPGLTVFDTIYRPRRTRLLTEAEAAGCRV 239
Query: 419 VSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+ G++M + Q F L+TG+ + M
Sbjct: 240 IDGLDMLVEQGATAFELWTGQSPDRAVM 267
>gi|336234612|ref|YP_004587228.1| shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361467|gb|AEH47147.1| Shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
Length = 277
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 148/287 (51%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKHLKDAINGVRALGISGLNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AV+ D++ P+A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPVARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
+ G+ ++ GAGGA R + F +GA+ + I + +AK L + A
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
LN E+ IL N T +GM+P+ + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSAACSLNEAEERLGEYDILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKW 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A AI+ +GV MF+ Q F +TG E M++IV+ +
Sbjct: 229 LKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|433545542|ref|ZP_20501895.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
gi|432183197|gb|ELK40745.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
Length = 283
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 22/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I + T++ GL PV HS+ P++HN F + Y V+ L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K A+M DE+ PLA+ I AVNT++ + DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSL---VE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEH 167
Query: 346 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
V G P + + + ++L N T +GM PN PV + L +V D +Y
Sbjct: 168 V-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYN 226
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL++A+A GA + SGV MF+ Q F L+TG +AP E MRE+VL +
Sbjct: 227 PLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|212224285|ref|YP_002307521.1| shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
gi|212009242|gb|ACJ16624.1| aroE shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
Length = 275
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 141/283 (49%), Gaps = 19/283 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
++A+T ++GLI +PV HS P +HN FR N +Y+ V DL+ + G
Sbjct: 1 MDAETVLYGLIGRPVSHSLSPAMHNALFRLYGMNAVYLAFEVSDLEGAIKGIRALGIRGL 60
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
+V P+KE V+ D + A+A+ +VNT++ R G+LIG+NTD + A+E K +
Sbjct: 61 NVTMPHKETVVGHLDGLSSEAEALNSVNTVVNR--GGELIGHNTDGVGARKALERFTKLK 118
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G + VL G S+ A VV+ + ERAK+L +
Sbjct: 119 GRR---------------VLIIGAGGAGKAIAHELSKVASVVVLNRTPERAKTLERFGIE 163
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
R L + +L NATP+GM N +R V E L + +V DAVYTP KT LL
Sbjct: 164 VGRLERSRLEAEIRNADVLINATPVGM--NEERSIVPPELLPEGAVVMDAVYTPPKTLLL 221
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
++AEA G + V G+ M + Q F L+TG +FMR + L
Sbjct: 222 REAEARGCLTVDGLWMLVYQGAESFRLWTGVSPDVDFMRRVAL 264
>gi|333987942|ref|YP_004520549.1| shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826086|gb|AEG18748.1| Shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 283
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 30/286 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I T +FG++ PV HS P +HN TF + + +YVP V L+ S
Sbjct: 2 ITGKTSIFGIMGDPVEHSLSPPMHNTTFSKLAIDSVYVPFHVKKGYLQSAMVGARSMGIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K AV+++ D + A+ I AVNT+ + + ++ GYNTD ++ AIE+
Sbjct: 62 GLNVTIPHKTAVIEYLDSLDTAAKLIGAVNTV--KFDENEVKGYNTDGLGAVKAIEEVTT 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
+ K V+ GAGGA RA++F GA +VI + FE+A L D
Sbjct: 120 VKNKK--------------VVILGAGGAARAISFQILLEGAESLVIANRTFEKAIELKED 165
Query: 346 VMG--------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVF 396
+ G F+ L + + IL N TP+GM+PN ++ P V+ + + +V
Sbjct: 166 LAGKLDVNVKTVTLGFD--LENELKNADILINTTPIGMYPNVNQKPLVTADMMHGGLVVN 223
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
D VY P +T LLK+A AGA +SG +M + Q + F ++TG E P
Sbjct: 224 DVVYNPLETGLLKEARKAGAQTISGTKMLIYQGVEAFRIWTGIEPP 269
>gi|312110148|ref|YP_003988464.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|423719183|ref|ZP_17693365.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215249|gb|ADP73853.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|383368086|gb|EID45361.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 277
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKQLKDAINGVRALGISGLNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AV+ D++ P A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPAARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
+ G+ ++ GAGGA R + F +GA+ + I + +AK L + A
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
LN E+ IL N T +GM+P+ + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSAACSLNEAEERLGEYDILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKW 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A AI+ +GV MF+ Q F +TG E M++IV+ +
Sbjct: 229 LKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|119511936|ref|ZP_01631034.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
gi|119463432|gb|EAW44371.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
Length = 294
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 29/294 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ G+I PV HS P++HN + + IY+P + ++L+ + ++ +
Sbjct: 6 ITGKTQLLGVIGHPVEHSLSPVMHNAALAQLGLDYIYLPFPIKPENLEVAIAGLAAINVV 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A+M E+ P AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 66 GFSVTIPHKQAIMPLLSEISPTAQAIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQ---- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFER----AKS 341
++ + ++ V+ G GGA RA+ G + G A++ + + ++ S
Sbjct: 120 --------TTYQQDWSQKIAVILGHGGAARAVVAGCQQLGFAQIHVVGRNMQKLTAFGNS 171
Query: 342 LASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS---EETLRDYQLV 395
S + ++D+ P+ +L N TP+GM+P + PVS + L +
Sbjct: 172 WGSSPLAEKLQVHIWDDLAKLIPQAN-LLVNTTPVGMYPLVNESPVSLADMQKLSSGAIA 230
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+D +YTP T+ L+ A+ GAI++ G+EM ++Q + ++ +E P + MR+
Sbjct: 231 YDLIYTPNPTQFLQQAQKHGAIVIDGLEMLVQQGVAALKIWLQQETLPVDVMRQ 284
>gi|116873669|ref|YP_850450.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742547|emb|CAK21671.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T++ LI P+ HSK PI++N +F + Y+ + V+ + + + +
Sbjct: 3 KRISGSTRLLSLIGTPIDHSKSPIMYNYSFEKAGLDYAYLAFDIPVNKVADAITAIKTFN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ D++ P A+ I AVNTI+ +GKL G+ TD +T + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVTNLRDS 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 340
++G+ + GAGGA A+ G + + IF+I +E+AK
Sbjct: 121 -------------SVDVSGKKMTIIGAGGAATAIQVQCALDGVKEIAIFNIQDDFYEKAK 167
Query: 341 ----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-R 390
S+ +V + D+ L + IL NAT +GMHP+ + PV + T+ R
Sbjct: 168 QTVASIKEEVPECSVHIYDLSDTKKLYAEIATSDILVNATLVGMHPHENETPVKDTTVFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D +YTP+KTRLL DAEAAGA V G+ M L Q + LFTGK+ P ++E+
Sbjct: 228 KDLIVADIIYTPKKTRLLLDAEAAGAKTVGGLGMLLWQGAEAYKLFTGKDMPVAEIKEL 286
>gi|167037479|ref|YP_001665057.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115893|ref|YP_004186052.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856313|gb|ABY94721.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928984|gb|ADV79669.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 284
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + S
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKSLGIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 109 -YGFIDSLTEVGKKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 227
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 228 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|134298882|ref|YP_001112378.1| shikimate 5-dehydrogenase [Desulfotomaculum reducens MI-1]
gi|170652868|sp|A4J3A0.1|AROE_DESRM RecName: Full=Shikimate dehydrogenase
gi|134051582|gb|ABO49553.1| shikimate dehydrogenase [Desulfotomaculum reducens MI-1]
Length = 291
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 163/293 (55%), Gaps = 25/293 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN T+V GL PV HS P +HN F+ ++ N YVP V D+LK+ + S + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K+ VM F DE+ P A+ I AVNTI+ ++GKL+GYNTD + + A+ +
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVN--NNGKLVGYNTDGKGFVRALTEE-- 121
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
A F +PL G+ +L GAGGA RA+A G R + I + + E+A+ LA D
Sbjct: 122 --------ARF-NPL-GKSAILIGAGGAARAVAVQLALSGLRTIYITNRNQEKAEELARD 171
Query: 346 VM------GAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFD 397
++ + P+ ++L + + ++ ATPLGM P D+VP + L LV D
Sbjct: 172 ILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCD 231
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P +T L+ A++ G+ ++G+ M L Q + F L+TG AP + MR ++
Sbjct: 232 LIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVL 284
>gi|398826203|ref|ZP_10584462.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
gi|398221636|gb|EJN08040.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
Length = 292
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 143/284 (50%), Gaps = 34/284 (11%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGTNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
FPYKEAV+ DE+ P A +AAVNT++ R DG+LIG+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPTAATMAAVNTVVVR--DGRLIGHNTDTT-------------GFA 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 347
A +P +G + G GG G+A+AF S + + + IFD + RA+ LA+ +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLKVSDLRIFDSEPARAEKLAALLAPHG 178
Query: 348 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
GA AR ED L+ GA L N TP+GM PN D PV+ LR+ V DAVY+P
Sbjct: 179 GARVARSVEDALD-----GATGLVNGTPVGMLPNRD-TPVAATLLRENLWVADAVYSPLI 232
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
T LL A A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAARAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|186684355|ref|YP_001867551.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186466807|gb|ACC82608.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 295
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P +HN ++ + +Y+P + ++L+ + ++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPAMHNAAIANLGLDYVYLPFPIAPENLEVAIAGFAVIGVV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A+M E+ PLAQ I AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 67 GFSVTIPHKQAIMPLLSEITPLAQMIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYK 124
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ + ++ V+ G GGA RA+ G G A++ + + +R +
Sbjct: 125 QDWSQ------------KVAVILGNGGAARAVVAGCHQLGFAKIHVVGRNVQRLQEFRDS 172
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 395
+ +E++ P+ +L N TP+GM+P D P+S E + + +
Sbjct: 173 WSNSPISENLQVHQWEELSKLIPQAN-LLVNTTPIGMYPKVDESPLSIEEIANLPTGAIA 231
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMREIVLAKF 454
+D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +E P E MR+ +L +
Sbjct: 232 YDLIYIPKPTQFLELAQKQGAIAIDGLEMLVQQGVAALKIWLQQENIPVEVMRQALLNQL 291
>gi|332157961|ref|YP_004423240.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
gi|331033424|gb|AEC51236.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
Length = 273
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 135/285 (47%), Gaps = 23/285 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
INA TKV+GLI KPV HS PI+HN F N N +Y+ V+ L+ +
Sbjct: 3 INAKTKVYGLIGKPVRHSLSPIMHNALFEKYNINAVYLAFEVELGRLRDAIMGAKALGIM 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K V KF DE+ A+ I +VNTI DG+L+GYNTD + A+E +
Sbjct: 63 GLNVTMPHKVEVTKFLDELSDEAREIGSVNTIAN--EDGRLVGYNTDGIGARKALERVTE 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
G K G + L S+ A VV+ + E+AK L
Sbjct: 121 VEGSKVLILGAGGAGRAIAYEL---------------SKVAEVVVLNRTLEKAKELEK-- 163
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
G + L + E IL NAT +GM VP + LR +V D VY P TR
Sbjct: 164 FGVKGDSLEELPYYIEWADILINATSVGMGEERSIVP--KNLLRPSLVVMDIVYKPLLTR 221
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LL+DA + G + V G+ M + Q F ++TG E EFMR + L
Sbjct: 222 LLRDARSMGCVTVDGLWMLVYQGAESFKIWTGVEVDVEFMRRVAL 266
>gi|420263280|ref|ZP_14765918.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769568|gb|EJF49413.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 289
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 3 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 63 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 119
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDF 336
+ G+ + GAGGA A+ A G + + + I
Sbjct: 120 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKDEFYPIIQ 167
Query: 337 ER----AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 391
E+ A+ AS++ + L ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 168 EKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRE 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+++LLKDA+ GA +G+ M L Q F L+TG+E P E ++ ++
Sbjct: 228 SLAVYDVIYNPRESQLLKDAKEVGAKTANGLSMLLYQGAAAFKLWTGQEMPVEKVKALI 286
>gi|75909313|ref|YP_323609.1| shikimate 5-dehydrogenase [Anabaena variabilis ATCC 29413]
gi|123609023|sp|Q3M8H2.1|AROE_ANAVT RecName: Full=Shikimate dehydrogenase
gi|75703038|gb|ABA22714.1| shikimate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 289
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 27/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL--A 343
R + A V+ G GGA RA+ G G A + + + +R + +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 344 SDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LVF 396
D A + D L + +L N TP+GM+P D P+S E L + Q + +
Sbjct: 168 WDNSPIAENLQVHTWDYLAKLVPQANLLVNTTPIGMYPQVDESPLSTEELANLQTGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMRE 448
D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ + + P + MR+
Sbjct: 228 DLIYIPKPTQFLQKAQQQGAIAIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQ 280
>gi|317128280|ref|YP_004094562.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315473228|gb|ADU29831.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
Length = 281
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
++ G+I P+GHS P +HN +R + N Y V + L+ G +V
Sbjct: 3 QIIGVIGDPIGHSLSPHMHNAAYRELGINMEYHAFHVKREQLENALKGVRGLGIKGLNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K V+ + DEV LA+ + AVNTI+ DGKLIG+NTD E + ++ + I+
Sbjct: 63 IPHKVNVLPYLDEVDELARHLGAVNTIVN--EDGKLIGFNTDGEGYLQSLYEFIQ----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--- 347
L + ++ GAGGA RA+ + G + +++ + E+ + L D
Sbjct: 116 -------GDLQTKRVLMIGAGGASRAVTLTIANSGVKEIIVTNRTAEKGEELVKDCKKFC 168
Query: 348 -GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ E++ E+ ++ N T +GM P+ +++P+S + ++ +V D +YTP KT+
Sbjct: 169 PSSFMSLEEV-EKNLERFDVVINTTSIGMAPHLNKLPISLDKVKSDTIVSDLIYTPFKTK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +AE G +++G++MF+ Q F +TG AP + MRE VL +
Sbjct: 228 FLIEAEKKGCRVLNGLDMFVYQGALAFKRWTGINAPTQVMREAVLQQL 275
>gi|282895773|ref|ZP_06303860.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
gi|281199273|gb|EFA74139.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
Length = 303
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALDHLGLDYVYLPFPIAPDNLQEAIACFASIGVV 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+A++ ++ P+AQAI AVNT+IR K +G NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHDLSPIAQAIGAVNTVIR--VGEKWVGTNTDVAGFIAPLQSTYN 129
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ ++ + V+ G GGA +A+ G G + + + E+ K
Sbjct: 130 QNWHE------------KKAVVIGNGGAAKAVVAGCIQLGMTEIHLVGRNIEKLKQFEQS 177
Query: 346 VMGAA-----------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD--- 391
+ + +E + P+ +L N TP+GM+PN D PV+E+ L
Sbjct: 178 WIDSTLADKFTNKLKIHSWEKLPQLIPQSN-LLVNTTPIGMYPNIDESPVTEDQLHQLPS 236
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+ + +D +Y P+ TR L+ A+ GAI + G+EM ++Q L+ +E EI +
Sbjct: 237 HAIAYDLIYIPKPTRFLELAQTQGAIALDGLEMLVQQGAAALKLWLQQE---NINVEIPI 293
Query: 452 AKF 454
AK
Sbjct: 294 AKM 296
>gi|217963602|ref|YP_002349280.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386009012|ref|YP_005927290.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|386027625|ref|YP_005948401.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217332872|gb|ACK38666.1| shikimate dehydrogenase [Listeria monocytogenes HCC23]
gi|307571822|emb|CAR85001.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|336024206|gb|AEH93343.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 289
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 33/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DF 225
I+ T++ GLI P+ HSK PI++N +F+ + Y+ F ++K T + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLA-FDTPIQKVADTIKAIRTFNL 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + DA
Sbjct: 64 RGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA- 120
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 340
+ G+ + GAGGA A+ GA+ + IF+I +++AK
Sbjct: 121 ------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQ 168
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 391
S+ +V D+ LN + IL NAT +GMHPN P+S ++ R
Sbjct: 169 TVASIKQEVPHCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVFRK 228
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 229 ELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|296333275|ref|ZP_06875728.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675221|ref|YP_003866893.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149473|gb|EFG90369.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413465|gb|ADM38584.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 280
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 32/293 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLAS----- 344
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTESTPSF 167
Query: 345 ---DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+V+ E + + ++ + T +GM+PN D VP+S + +V D VY
Sbjct: 168 HNKEVLSIKEAEERLKQYD-----VIIHTTSVGMYPNVDEVPISLQRAASSAVVCDIVYN 222
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 223 PIQTALLKEANQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|257866088|ref|ZP_05645741.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257872419|ref|ZP_05652072.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
gi|257800022|gb|EEV29074.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257806583|gb|EEV35405.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
Length = 286
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGTDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 338
+ G + GAGGA A+ A G + + + I E+
Sbjct: 117 ----------IQVSILGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 339 AKSLASDVMG--AARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEETL-RDYQ 393
+A ED + + ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTESPLKDKTLLRESL 226
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TGK P E ++ ++
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|46908470|ref|YP_014859.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224844|ref|YP_002758951.1| oxidoreductase [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254825200|ref|ZP_05230201.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853359|ref|ZP_05242707.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254931651|ref|ZP_05265010.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|255520409|ref|ZP_05387646.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|300763954|ref|ZP_07073950.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386732984|ref|YP_006206480.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404281856|ref|YP_006682754.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404287669|ref|YP_006694255.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750634|ref|YP_006674100.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405753508|ref|YP_006676973.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405756414|ref|YP_006679878.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|406705030|ref|YP_006755384.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424715118|ref|YP_007015833.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824044|ref|ZP_18249057.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|46881741|gb|AAT05036.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. F2365]
gi|225877306|emb|CAS06020.1| Putative oxidoreductase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606724|gb|EEW19332.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|293583206|gb|EFF95238.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293594445|gb|EFG02206.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300515295|gb|EFK42346.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|332312724|gb|EGJ25819.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|384391742|gb|AFH80812.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404219834|emb|CBY71198.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes ATCC
19117]
gi|404222708|emb|CBY74071.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2378]
gi|404225614|emb|CBY76976.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2540]
gi|404228491|emb|CBY49896.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2755]
gi|404246598|emb|CBY04823.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406362060|emb|CBY68333.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424014302|emb|CCO64842.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 289
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 146/293 (49%), Gaps = 37/293 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|162449910|ref|YP_001612277.1| hypothetical protein sce1639 [Sorangium cellulosum So ce56]
gi|161160492|emb|CAN91797.1| aroE1 [Sorangium cellulosum So ce56]
Length = 258
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 142/269 (52%), Gaps = 18/269 (6%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 245
+ G +H +R + + Y+P V D++ + G V PYK+AV+ DE+
Sbjct: 7 TTGAAMHLAGYRALGLDFTYIPFAVTDVEGATRGMRALGIRGLGVSMPYKQAVIPLLDEL 66
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
P+A+ I AVNTI+ DG+L GYNTD ++ A+E+ + L G
Sbjct: 67 DPVAERIGAVNTIVN--DDGRLRGYNTDWIGAVRALEEV--------------THLGGAR 110
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
+L GAGGA RA+AFG RGA V + + D E+A+ LA+ V GAA P D P+ G
Sbjct: 111 VLLLGAGGAARAVAFGLAERGASVTVANRDLEKARQLAAAVGGAAVPL-DAAALSPDHG- 168
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
+L NAT LGM R PV EE LR+ LV D VY P T L+ A GA V G M
Sbjct: 169 VLVNATSLGMAEVDARSPVPEEVLREGLLVMDIVYKPMITELVAAARRRGATAVHGGRML 228
Query: 426 LRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L QA QF L+TG+E P + M E + A+
Sbjct: 229 LHQAAEQFRLYTGREPPLDAMDEALRAQL 257
>gi|326390171|ref|ZP_08211732.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325993819|gb|EGD52250.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 292
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN+ TK++GLI PV HS P++HN F+ +N N +Y V + L+ +
Sbjct: 11 INSSTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 346 VMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
+ + D + PE A+L N T +GM+PN + PVSE + + V+D +Y
Sbjct: 176 IKREFKVQCDYCSINEVEEIPEI-AMLVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIY 234
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
P +T LK A+ G +G+ M L QA F L+TG+
Sbjct: 235 NPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|29726767|pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
gi|29726768|pdb|1NVT|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
Length = 287
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 67 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 124
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
KN V+ GAGGA RA+AF ++ ++I + E+A++LA ++
Sbjct: 125 RVKDKN-------------IVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 170
Query: 347 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
G F L+ + I+ NATP+GM+PN D P V E LR+ +V D
Sbjct: 171 AEKLNKKFGEEVKFSG-LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDL 229
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 230 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 285
>gi|268315725|ref|YP_003289444.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262333259|gb|ACY47056.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 297
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 31/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I A T+ L+ PV HS P++HN F+ + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPIALLGDPVAHSFSPLIHNTGFQTQGLDFVYLACRVPKDALPEAIAGLRALGFA 68
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIE 282
G +V P+KEAV D P A+AI AVNTI+ R +DG +LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGAVELIGDNTDVE------- 120
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAK 340
G+ S LAG V+ GAGGA RA+ + + R R+ I R +
Sbjct: 121 ------GFLEPLQSLADRLAGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 341 SLASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSE-ETLRDY 392
+LA+D + P++ A ++ NATP+GMHP+ P E
Sbjct: 175 ALAAD-FATYDTRRALQVMAPDEAAPAVRSACLIVNATPVGMHPHVAASPWPHAEDFGPE 233
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
Q+V+D VY P +TRLL++A A GA + G+ M + QA + +TG+E P+E ++
Sbjct: 234 QIVYDLVYNPVRTRLLREAAARGATTIDGLTMLIGQAAAAYRQWTGRELPREAVQ 288
>gi|350266770|ref|YP_004878077.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599657|gb|AEP87445.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 280
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FG+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLFGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTEST--P 165
Query: 350 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPISLQRAASSAVVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LLK+A G + GV MF+ QA F L+TG E E MR IV+ K
Sbjct: 226 TALLKEAHQKGLKTLDGVGMFVEQAALSFQLWTGLEPDIEKMRSIVIGKL 275
>gi|15669272|ref|NP_248077.1| shikimate 5-dehydrogenase [Methanocaldococcus jannaschii DSM 2661]
gi|2492956|sp|Q58484.1|AROE_METJA RecName: Full=Shikimate dehydrogenase
gi|1591730|gb|AAB99086.1| shikimate 5-dehydrogenase (aroE) [Methanocaldococcus jannaschii DSM
2661]
Length = 282
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
KN V+ GAGGA RA+AF ++ ++I + E+A++LA ++
Sbjct: 120 RVKDKN-------------IVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 165
Query: 347 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
G F L+ + I+ NATP+GM+PN D P V E LR+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSG-LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDL 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|167040141|ref|YP_001663126.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307724540|ref|YP_003904291.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
gi|166854381|gb|ABY92790.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307581601|gb|ADN55000.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
Length = 284
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 109 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 227
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 228 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|300914225|ref|ZP_07131541.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
gi|300889160|gb|EFK84306.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
Length = 292
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 11 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIK 70
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 236 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|423068252|ref|ZP_17057040.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
gi|355367143|gb|EHG14856.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
Length = 284
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 146/300 (48%), Gaps = 31/300 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSL 342
+G+ SF + G+ ++ G+GGA A+ A GA + +F FER
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQ 164
Query: 343 ASDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
+ AA P E ++L + A+L N T LGM T VP S L L
Sbjct: 165 MKQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP-STIRLSKSLL 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
V D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 224 VADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMPTKEIWQALEQKY 283
>gi|440684478|ref|YP_007159273.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
gi|428681597|gb|AFZ60363.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
Length = 288
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 31/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 2 ISGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFTAIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ F E+ P+AQAI AVNT+ R+ +G NTD E I+ ++
Sbjct: 62 GFSVTIPHKQAILPFLTEISPIAQAIGAVNTVTRQ--GNGWVGTNTDVEGFISPLQ---- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ + + V+ G GGA RA+ G G A + + + ++
Sbjct: 116 --------TTYNQDWSQKTAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLTEFWQS 167
Query: 346 VMGAARPFED---ILNFQ--PE---KGAILANATPLGMHPNTDRVPVSEETLRDYQ---L 394
+ PF D + ++Q P+ + +L N TP+GM+P+ D+ P+S E + D +
Sbjct: 168 WQNS--PFADKFQVHDWQELPKLIPQANLLVNTTPVGMYPHVDQSPLSIEEMVDLPSGGI 225
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMRE 448
V+D +Y P+ T+ LK AE GAI + G+EM ++Q ++ +E P MR+
Sbjct: 226 VYDLIYIPKPTQFLKLAEKQGAIPIDGLEMLVQQGAAALKIWLQQENVPITEMRQ 280
>gi|399046902|ref|ZP_10739090.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
gi|398055052|gb|EJL47144.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
Length = 283
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 22/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I + T++ GL PV HS P++HN F + Y V+ L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSLSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K A+M DE+ PLA+ I AVNT++ + DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSL---VE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEH 167
Query: 346 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
V G P + + + ++L N T +GM PN PV + L +V D +Y
Sbjct: 168 V-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYN 226
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL++A+A GA + SGV MF+ Q F L+TG +AP E MRE+VL +
Sbjct: 227 PLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|394992034|ref|ZP_10384827.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
gi|393807050|gb|EJD68376.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
Length = 280
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+TG+E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTGQEPDSGLMRAIVEGKL 275
>gi|282881812|ref|ZP_06290468.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
gi|281298348|gb|EFA90788.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
Length = 286
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 25/295 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 225
+I+ +TK+ GL+ P+ HS P +HN +F V + +Y+ P DL+K T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLEKVLDTLKIIGA 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ +P K ++K+ DE Q I + NTI + K+ GYNTD
Sbjct: 62 RGANITYPNKIEILKYLDEASEEVQIIGSCNTI-SIDENKKIKGYNTDG----------- 109
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 344
RG+ + + G+ F + G GGAG A+A G R+ + +IDF++AK++
Sbjct: 110 --RGFVQSLKNNSIEIKGKTFGIMGLGGAGSAIATCLGLEGLKRLYVKEIDFDKAKTVKK 167
Query: 345 DVMGAARPFEDILNFQPE-------KGAILANATPLGMHPNTDRVPVSEETLRDYQLV-F 396
+ + E IL + K +++ NATP+GM + D P+ E LR + L+ +
Sbjct: 168 RLEEKIKGLEIILTKDQQDFAKNLDKMSLVINATPIGMGRSKDDSPMDPEYLRGFPLIIY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D +Y+P +T LL+ A++ G + +G++M + Q FN++TG+E + ++E ++
Sbjct: 228 DVIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTGQEMDTKLVKERIV 282
>gi|261349968|ref|ZP_05975385.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
gi|288860751|gb|EFC93049.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 281
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 34/293 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VMK+ D++ +A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDSIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 346 VMGAARPFEDILNFQP--------EKGAILANATPLGM--HPNTDRVPVSEETLRDYQLV 395
V + D ++F IL + TP+GM H N + + +E+ D +V
Sbjct: 164 VKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSSHVNEEAIVKAEDMHSDL-VV 220
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 221 NDIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|145577901|gb|ABP82669.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 135/254 (53%), Gaps = 30/254 (11%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------ASDVMGAARPFE 354
+ +L GAGGA RA+ F G + + I + E+A L S + R E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
+ N+ I+ + T +GMHP+ P+ +L+ +V D +Y P +T+LL+DA+A
Sbjct: 167 EQGNYD-----IIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAK 221
Query: 415 GAIIVSGVEMFLRQ 428
GAI+ +G++MF+ Q
Sbjct: 222 GAIVQNGIDMFVYQ 235
>gi|257875721|ref|ZP_05655374.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257809887|gb|EEV38707.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 286
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 338
+ G + GAGGA A+ A G + + + I E+
Sbjct: 117 ----------IQVSIIGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 339 AKSLASDVMG--AARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEETL-RDYQ 393
+A ED + + ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESL 226
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TGK P E ++ ++
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|443309942|ref|ZP_21039617.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
gi|442779995|gb|ELR90213.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
Length = 291
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 34/296 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS PI+HN H+ + +Y+P+ V D+L+ S +++ D
Sbjct: 5 ITGKTKLLGVIGHPVEHSLSPIMHNAAIAHLGLDYVYLPLPVHPDNLQAAISGFAAIDLV 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A+ E+ A+AI A+NT+ R S G NTD E IT ++
Sbjct: 65 GFNITIPHKQAITPLITEISATAKAIGAINTVWRT-SSSIWAGTNTDVEGFITPLQ---- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-----------ARVVIFDID 335
++ + + ++ G GGA RA+ G G ++ F
Sbjct: 120 ---------TYAQNWSEKTALVLGNGGAARAVVAGCAQLGFKETYVVGRNPTKLAEFIAS 170
Query: 336 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDY 392
+ + +LA+ ++ R ++ + P+ I+ N TP+GM+PN P+S+E L
Sbjct: 171 WGNS-ALATQLL--VRSWDKLPLLIPQAKVII-NTTPIGMYPNVRESPLSDEEMGLLAAD 226
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ +D +YTP T+ L+ A+A GA + G+EM ++Q ++ + AP + MR+
Sbjct: 227 AIAYDLIYTPSPTKFLQQAQAKGATAIDGLEMLVQQGAAALKIWLQQPAPIDVMRQ 282
>gi|392428507|ref|YP_006469518.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
gi|419777500|ref|ZP_14303412.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|383844980|gb|EID82390.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|391757653|dbj|BAM23270.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
Length = 284
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 343
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRQTSFERVSQQM 165
Query: 344 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-- 393
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKTL 222
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
LV D +Y P +T L+ A+ +V+G+ M L QA F L+TGK+ P
Sbjct: 223 LVADVIYQPFETPFLQWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|345017564|ref|YP_004819917.1| shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032907|gb|AEM78633.1| Shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 292
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 22/278 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA+TK++GLI PV HS P++HN F+ +N N +Y V + L++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
P +T LLK A+ G +G+ M L QA F L+TG+
Sbjct: 236 PFETALLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|448318951|ref|ZP_21508461.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
gi|445597479|gb|ELY51554.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
Length = 266
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
V+GL+ PVGHS P +H + + YV D+L+ + G +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELALEARYVTFEPAPDELEAAIRGAGALGIRGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K V++F E LA I A NTI S + G+NTD ++ A+ D
Sbjct: 62 IPFKRDVLEFV-EPDELASRIGAANTIDF--SGAEPTGHNTDAAGALRALRD-------- 110
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-A 350
G L G ++ GAGGAGRA++FG GA V I + A+ LA++V GA
Sbjct: 111 -----HGVALEGADALVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAAEVPGADG 165
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
R ED L + +L NAT +GM D PV E L V DAVY P +TRLL+D
Sbjct: 166 RGLED-LEDAVDDADVLVNATSVGME--EDATPVPSEVLHGELAVLDAVYRPLETRLLRD 222
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A AAGA V G M L Q + F L+T + AP + M E + ++
Sbjct: 223 AAAAGATTVDGAWMLLYQGVEAFELWTDRTAPVDEMNEALRSRL 266
>gi|422419863|ref|ZP_16496818.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|422422950|ref|ZP_16499903.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313632237|gb|EFR99299.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313636739|gb|EFS02399.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 289
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNL 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 340
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVTVAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQ 168
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
S+ +V D+ L + IL NAT +GMHP + PV + T+
Sbjct: 169 TVASIKQEVPNCIVQIYDLNDTEKLYAEIATSDILVNATLVGMHPYESKTPVKDATIFHK 228
Query: 393 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P E ++E+
Sbjct: 229 NLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|424787497|ref|ZP_18214263.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
gi|422113792|gb|EKU17519.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
Length = 284
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 35/290 (12%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+Y+ V DDLK D
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEVSKDDLKATVENIRRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSL 342
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQ 164
Query: 343 ASDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ- 393
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 165 MKQIQQAASTKISVLPLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKT 221
Query: 394 -LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
LV D +Y P +T L+ A+ +++G+ M L QA F L+TGK+ P
Sbjct: 222 LLVADVIYQPFETPFLQWAKKQNVQVINGLGMLLYQAAEAFKLWTGKDMP 271
>gi|428280059|ref|YP_005561794.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485016|dbj|BAI86091.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 280
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|418965062|ref|ZP_13516849.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343895|gb|EID22067.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 284
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 146/300 (48%), Gaps = 31/300 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISEDDLKTTVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSL 342
+G+ SF + G+ ++ G+GGA A+ A GA + +F FER
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQ 164
Query: 343 ASDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
+ AA P E ++L + A+L N T LGM T VP S L L
Sbjct: 165 MKQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP-STIRLSKSLL 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
V D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 224 VADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMPTKEIWQALEQKY 283
>gi|435846092|ref|YP_007308342.1| shikimate dehydrogenase [Natronococcus occultus SP4]
gi|433672360|gb|AGB36552.1| shikimate dehydrogenase [Natronococcus occultus SP4]
Length = 266
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 141/284 (49%), Gaps = 22/284 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
V+GLI PVGHS P +H + + + YV D+L+ + G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAAYDELGIDARYVTFEPAPDELEAAIRGAEALGVCGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K V++F E LA I AVNTI S + G+NTD ++ A+ +E G
Sbjct: 62 IPFKRDVLEFV-EPDELAGRIGAVNTIDF--SGPEPTGHNTDAAGALRAL----REDGVV 114
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-A 350
L ++ GAGGAGRA++FG GA V I + A+ LA+DV GA
Sbjct: 115 ---------LEDADVLVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAADVPGADG 165
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
R ED+ + + +L NAT +GM D PV E L V DAVY P +TRLL+D
Sbjct: 166 RGLEDLGDVLADAD-VLVNATSVGME--EDATPVPAEALHGELAVLDAVYRPLETRLLRD 222
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AE AGA V G M L Q + F L+T + AP E M E + ++
Sbjct: 223 AEDAGATTVDGAWMLLYQGVEAFELWTDRTAPVEEMNEALRSRL 266
>gi|407980292|ref|ZP_11161085.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
gi|407413004|gb|EKF34747.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
Length = 300
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 36/303 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 225
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 341
GY G L G+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 --LGYVRNLIEHGVELTGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 342 LASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 389
A+ + + P ED F+ E + AILAN T LGM P D + + ++TL
Sbjct: 173 NANYINNEMKSFGVKANLFPLEDKDAFRREVAESAILANGTSLGMKP-LDELSIIDDTLD 231
Query: 390 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
R +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P E ++
Sbjct: 232 VLRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVK 291
Query: 448 EIV 450
+I+
Sbjct: 292 QIL 294
>gi|147669087|ref|YP_001213905.1| shikimate 5-dehydrogenase [Dehalococcoides sp. BAV1]
gi|189046312|sp|A5FRZ5.1|AROE_DEHSB RecName: Full=Shikimate dehydrogenase
gi|146270035|gb|ABQ17027.1| shikimate dehydrogenase [Dehalococcoides sp. BAV1]
Length = 286
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G++ GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLE--------HN 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + +S LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLISPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|157694398|ref|YP_001488860.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
gi|157683156|gb|ABV64300.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 300
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 36/303 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 225
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLNYLDELDDSAKYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF------------ 332
GY G LAG+ L G+GGA +A G R + IF
Sbjct: 115 --LGYVRNLIEHGVELAGKKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 333 DIDFERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 389
++++ + + V P ED F+ E + AILAN T LGM P D++ + ++TL
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 390 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
R+ +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P + ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 448 EIV 450
+I+
Sbjct: 292 QIL 294
>gi|288555655|ref|YP_003427590.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
gi|288546815|gb|ADC50698.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
Length = 278
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 21/285 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K FGLI PV HS P +HN FR + Y + V+ DL++ G +V
Sbjct: 3 KRFGLIGHPVAHSMSPQMHNDAFRACEIDADYEAIDVEAGDLEEVMEKIRIGVLDGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M F DE+ A+ I AVNTI+R ++GKL+GYNTD + +IE +
Sbjct: 63 IPHKVAIMSFIDEIDREAERIGAVNTIVR--NNGKLVGYNTDGAGYMQSIEPYLP----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
S L ++ GAGGA RA+ G + +V+ + E+A +L + +
Sbjct: 116 -------SNLHDINVLVIGAGGAARAVCASFLGAGVSSLVVANRTKEKADTLLNLISTKQ 168
Query: 351 RPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ + EKG I+ N T +GM P T++ P+S L+D +V D +Y P +T
Sbjct: 169 DQTNAMTLSEAEKGLERFDIIVNTTSVGMSPYTEQKPISLTKLKDKAIVSDLIYNPLETA 228
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LK+A GAI V+GV MF+ Q F +TG + ++ M IVL
Sbjct: 229 FLKEAAERGAITVNGVGMFVNQGALSFEYWTGIKPDRKRMTNIVL 273
>gi|389573017|ref|ZP_10163093.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
gi|388427174|gb|EIL84983.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
Length = 300
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 36/303 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 225
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF------------ 332
GY G LAG+ L G+GGA +A G R + IF
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 333 DIDFERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 389
++++ + + V P ED F+ E + AILAN T LGM P D + + ++TL
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDELSIIDDTLD 231
Query: 390 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
R +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P E ++
Sbjct: 232 VLRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVK 291
Query: 448 EIV 450
+I+
Sbjct: 292 QIL 294
>gi|154686826|ref|YP_001421987.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154352677|gb|ABS74756.1| AroD [Bacillus amyloliquefaciens FZB42]
Length = 280
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+T +E MR IV+ K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVVGKL 275
>gi|304403896|ref|ZP_07385558.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346874|gb|EFM12706.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 293
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ T +FG+I P+ HSK P++ N FR NG+Y + D L F + +
Sbjct: 15 IDSHTVLFGVIGDPIRHSKSPVMLNRAFREAGVNGVYTAFHITPDKLGDFIAGVRAMGIR 74
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VMK D + A AI AVNTI+ +G L G+NTD + ++++ +
Sbjct: 75 GVNVTIPHKLDVMKHLDRIDESALAIGAVNTIVN--DNGVLTGFNTDGIGYVRSLKEEAE 132
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS- 344
L G+ V+ GAGGA R + + + A + I + +RA LA+
Sbjct: 133 ------------PTLDGKNIVVLGAGGAARGIVYALTNESPAAITIVNRTEQRAVELAAS 180
Query: 345 -----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
DV G + D L I+ N T GM P+ + PV LR + D +
Sbjct: 181 MRERADVRGVS---TDSLQSVCVDADIIINTTSTGMFPHVEESPVEASWLRPGAVASDII 237
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P KT+ L DAE G I G+ MF+ Q F +TG+ AP MRE VL F
Sbjct: 238 YNPMKTKFLADAERQGCRIHGGLGMFIYQGAYAFEYWTGQPAPAAAMREAVLDAF 292
>gi|334116684|ref|ZP_08490776.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
gi|333461504|gb|EGK90109.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
Length = 325
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 39/317 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +++
Sbjct: 2 IKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGFAAIGVR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE---- 282
GFS+ P+K+A++ EV P+A+AI AVNT+ SD G NTD E + ++
Sbjct: 62 GFSITIPHKQAILPLLSEVSPIARAIGAVNTVYL--SDKGWCGTNTDVEGFLAPLQTPPT 119
Query: 283 --------DAIK--ERGYK---------NGTASFGSPLAGRMFVLAGAGGAGRALAFGAK 323
DA ERG G A GS + ++ V+ G GGA RA+ G
Sbjct: 120 PPYQGGAKDATSPLERGNTAVESCPPPYQGGARGGSDWSQKVAVILGNGGAARAVVAGCA 179
Query: 324 SRG-ARVVIFDIDFERAKSLASDVMGAARPFEDI-------LNFQPEKGAILANATPLGM 375
G A + + + + + + P +++ L+ + +L N TP+GM
Sbjct: 180 QLGCAEIHVVGRNEQNLAEFQQSWINSPMPVQNLQVHTWENLSMLISQADLLVNTTPVGM 239
Query: 376 HPNTDRVPVSEETLRDYQ---LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQ 432
+P ++ PV+E L +V+D +YTP T+ LKDA+ GA + G+EM ++Q
Sbjct: 240 YPQGEKSPVAEGALDRISAGAIVYDLIYTPNPTQFLKDAKLRGARAIDGLEMLVQQGAAA 299
Query: 433 FNLFTGKEA-PKEFMRE 448
++ KE+ P MR+
Sbjct: 300 LKIWLDKESVPVHVMRQ 316
>gi|300814852|ref|ZP_07095086.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511048|gb|EFK38314.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 286
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 25/292 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 225
+I+ +TK+ GL+ P+ HS P +HN +F V + +Y+ P DL K T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLGKVLETLKIVGA 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ +P K ++K+ DE Q I + NTI+ + K+ GYNTD
Sbjct: 62 KGANITYPNKIEIVKYLDEASDEVQIIGSCNTILI-DENKKIKGYNTDG----------- 109
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 344
RG+ + + G+ F + G GGAG A+A +G R+ + ++DF++AK++
Sbjct: 110 --RGFVKSLKNNSIDIKGKTFGIMGLGGAGSAIATCLGLQGLKRLYVKEVDFDKAKNVKK 167
Query: 345 DVMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQ-LVF 396
+ + E IL EK +++ NATP+GM + D P+ E LR + +++
Sbjct: 168 RLEEKIKGLEIILTKDQQDFAQNLEKMSLVINATPIGMGRSKDDSPMDPEYLRGFPVIIY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +Y+P +T LL+ A++ G + +G++M + Q FN++TG+E + ++E
Sbjct: 228 DIIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTGEEMDTKLVKE 279
>gi|167768014|ref|ZP_02440067.1| hypothetical protein CLOSS21_02557 [Clostridium sp. SS2/1]
gi|317498392|ref|ZP_07956687.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710343|gb|EDS20922.1| shikimate dehydrogenase [Clostridium sp. SS2/1]
gi|316894286|gb|EFV16473.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 291
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 341
G + G+ V+ GAGGA A+ GA+ + IF D FERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 342 LASDVMGAARPFE---------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
+ + + D + + + IL N T LGM P D +S+ T+
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 393 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LV D VY P +TR L++A+ G I V G M L Q + F LFTGK+ P + ++E
Sbjct: 229 GLVVADVVYNPEETRFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|333995685|ref|YP_004528298.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
gi|333734548|gb|AEF80497.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
Length = 504
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 198/460 (43%), Gaps = 33/460 (7%)
Query: 7 RPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSGTRF 61
R GG Y G E R+ + L AE D ++ +L+ + + ++ GTR
Sbjct: 61 RRSLDGGKYVGGEGARITLLSKGLAFAEADRRRNFAYVDLEDDLYVPSLEEAARTYGTRI 120
Query: 62 IVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPII 119
I S N++ + DL + ++ G +++K + + R++Q + I
Sbjct: 121 IRSYHNMN---GVDHDLAAKLRELRRVGDELVKAAVMPQSLDDTIRVYQAAKETSDLEKI 177
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL-----GLPTVESLRQTYKVEHINADTK 174
+G+ G+ +++L+ L Y ++KG P + G L + + I TK
Sbjct: 178 LLCMGDYGVSTRILAEPMGSYLSYTTVKGEPDMPAGASGQLDPRELAEQFHFREITGKTK 237
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 234
+FG+ P+ S P N F + +Y+P D + +G SV PY
Sbjct: 238 IFGVTGFPLKVSASPHFFNTVFDIEKTDAVYIPFPADSIHSLIRLAEEIRISGVSVTVPY 297
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
KE+V+ F L Q+I A NTI+ +DG +GYNTD + G+ +
Sbjct: 298 KESVLPFLFCKSDLVQSIGACNTIVS-SADG-WMGYNTDAQ-------------GFTDSL 342
Query: 295 ASFG--SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
F L G+ + GAGG RA+A + +I + RA+ +A A
Sbjct: 343 LEFSGRKDLRGKRVTIVGAGGVSRAVAAEVYRLKGKALILNRTAVRARDVALPYKFAWAS 402
Query: 353 FEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
++ + + I+ T +GM P D P+ +LV D +Y P KTR L A
Sbjct: 403 LDNKGIEMMEKYADIIIQTTSVGMEPLPDADPIEFYHFTGKELVMDLIYKPAKTRCLVRA 462
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
EA+G I++G +M +RQA Q+ F GKE P + + L
Sbjct: 463 EASGCRILNGYDMLIRQARYQYTYFMGKEFPPSLISRVKL 502
>gi|47093352|ref|ZP_00231120.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|417315877|ref|ZP_12102547.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|47018271|gb|EAL09036.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|328465818|gb|EGF37006.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
Length = 289
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 145/293 (49%), Gaps = 37/293 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 223
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTF--- 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 340 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
K S+ +V D+ L + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLTAEIATSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|375307128|ref|ZP_09772418.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375080846|gb|EHS59064.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 296
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 33/303 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGLRALNI 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G++V P K ++++ DE+ A+ AVNT++ ++GKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSARFTGAVNTVVN--TNGKLKGYSTDGS---------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 341
GY G L G+ L G+GGA +A A G A + IF D F RAK
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAKE 170
Query: 342 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 389
+ V + P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHAQVKASIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY+P K+RL++ AE+ GA ++G+ M L Q F L+TG+E P +F++E
Sbjct: 231 RSDLIVTDVVYSPAKSRLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVDFIKEQ 290
Query: 450 VLA 452
+ A
Sbjct: 291 LFA 293
>gi|433444334|ref|ZP_20409253.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
gi|432001626|gb|ELK22499.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
K+FGLI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 3 KLFGLIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVQGLKALQCAGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 63 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 350
L+G ++ GAGGA R + F K A + + + E+A++ A
Sbjct: 116 -------IELSGARILIIGAGGAARGIYFTLLKHEAAAIDVCNRTMEKAEAFIQKERSAV 168
Query: 351 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
E + GA I+ N T +GM+P+ D +P+S +TL+ +V D +Y P T+ L
Sbjct: 169 YSLEQA---EERLGAYDIIINTTSVGMYPHVDTMPISLQTLKTGTIVSDIIYNPLMTKFL 225
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++A+ GA + +GV MF+ Q F +TG + M ++V+ +
Sbjct: 226 QEAKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 271
>gi|429505975|ref|YP_007187159.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487565|gb|AFZ91489.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 280
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ F RG FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI-FTTIVRG-EPKQFDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTIDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|451822090|ref|YP_007458291.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788069|gb|AGF59037.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T ++ LI P+GHS P ++N +F+ + + YV + ++ +K + + + +
Sbjct: 3 KRISGTTALYCLIGTPIGHSGSPAMYNYSFQKLGIDSAYVAFDISIEKVKDTIAAFRTLN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ DE+ P A+ + AVNTI+ GKL G TD
Sbjct: 63 IKGANVTMPCKNEVAKYMDELSPAARLVGAVNTIVN--DGGKLTGNITDG---------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI--DF----- 336
G+ G + + + GAGGA A+ GA+ + F+I DF
Sbjct: 111 ---VGFVRNLKEHGVDIKNKKITILGAGGAATAIQVQCALDGAKEINTFNIKDDFYKKAE 167
Query: 337 ---ERAKSLASDVMGAARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLR 390
E + S+ + ED+ LN + IL NAT +GMHPN + P+ + R
Sbjct: 168 KTIENIRKEVSECVLNLYDLEDVKKLNEKIADSDILVNATHVGMHPNENESPIKDIRVFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D +Y PRKT+LL++AEAAG IV+G+ M L Q + F L+TG E P + + E+
Sbjct: 228 RDLVVSDVIYNPRKTKLLEEAEAAGCKIVTGIGMLLWQGVEAFKLYTGLEMPAKEVDEL 286
>gi|423081389|ref|ZP_17069997.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
gi|357551055|gb|EHJ32859.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
Length = 287
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 337
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRSEQ 166
Query: 338 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|443631865|ref|ZP_21116045.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347980|gb|ELS62037.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 280
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 149/290 (51%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGIQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTEST--P 165
Query: 350 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LLK A G + GV MF+ QA F L+TG+E E MR IV+ +
Sbjct: 226 TALLKQANQKGLKTLDGVGMFVEQAALSFQLWTGREPDIEKMRSIVIGQL 275
>gi|423084552|ref|ZP_17073052.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
gi|357552122|gb|EHJ33897.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
Length = 287
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 337
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRAEQ 166
Query: 338 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|240103652|ref|YP_002959961.1| shikimate 5-dehydrogenase [Thermococcus gammatolerans EJ3]
gi|239911206|gb|ACS34097.1| Shikimate 5-dehydrogenase (aroE) [Thermococcus gammatolerans EJ3]
Length = 272
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++A+T+++GLI P HS P +HN FR + N +Y+ V + LK
Sbjct: 1 MDAETRLYGLIGFPARHSLSPAMHNAAFRELGMNAVYLAFEVAPERLKMAVDGVRGLGIH 60
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K V++ D + A+ I +VNTI+ +DG+LIGYNTD + A+E
Sbjct: 61 GLNVTMPHKTTVIEHLDGLSGEAEEIGSVNTIV---NDGELIGYNTDGVGARRALEMVTS 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
RG KN VL G A S+ + VV+ + E+A++L
Sbjct: 118 LRG-KN--------------VLIIGAGGAGRAIAYALSKVSEVVVLNRTPEKARALERFG 162
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ R + L +L NATP+GM N+D PV E LR+ +V D VY P KTR
Sbjct: 163 VTGDRLTPENLRRYLANADVLINATPVGM--NSDESPVPAELLREGLVVMDIVYKPLKTR 220
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LL++AE G + V G+ M + Q F L+TGK E MR L
Sbjct: 221 LLREAERRGCVTVDGLWMLVHQGAESFRLWTGKSVDPELMRRAAL 265
>gi|308174355|ref|YP_003921060.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307607219|emb|CBI43590.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
Length = 280
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSSLMRAIVEGKL 275
>gi|56963403|ref|YP_175134.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
gi|81600933|sp|Q5WHI2.1|AROE_BACSK RecName: Full=Shikimate dehydrogenase
gi|56909646|dbj|BAD64173.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
Length = 275
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 150/285 (52%), Gaps = 23/285 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T+ FGLI P+GHSK P++H ++ + + +Y + +L T + GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K A++ + DE+ A+A+ AVNT++ + DG+ +G NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA---SDVM 347
L GR ++ GAGGA RA+ + A + + + E+A+ LA S +
Sbjct: 119 ----------LTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLT 168
Query: 348 GAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A P + + G +L N T +GM+P+T + P++ + L+ +V D +Y P +T
Sbjct: 169 IEAIPLNE---AESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYET 225
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
LL++A+ G I++G+ MF+ Q +TG++ ++ M +V
Sbjct: 226 ALLQEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
>gi|52549978|gb|AAU83827.1| shikimate 5-dehydrogenase [uncultured archaeon GZfos34A6]
Length = 272
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 21/284 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I PV HS P++HN F+ + + +Y+ V ++L S +G +V
Sbjct: 4 IYGIIGDPVAHSLSPVMHNAAFKKLGLDAVYIAFCVPLEELGDAIRGAKSLGISGLNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P KE + F +A+ I A+NTI + GYNTD ++ +E+ + E
Sbjct: 64 PLKEKALSFV-ATEEVAKKIGAINTIDFSSTP---TGYNTDGIGALMVLEETVGE----- 114
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-AR 351
+ G+ ++ GAGGA RA++F + GA V + + R+ LAS++ A +
Sbjct: 115 --------VRGKNVLIIGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANSI 166
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
L Q IL NAT +GMHPN D ++ + + +VFD VY P +T+LLK+A
Sbjct: 167 SLGAELKNQIRDSDILINATSVGMHPNEDATLITADLMHPDLVVFDIVYNPIETKLLKEA 226
Query: 412 EAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ AG V+GV+M + Q FNL+T K+ P E M V A
Sbjct: 227 KRAGVKKTVNGVKMLVYQGAASFNLWTKKDPPVEVMENAVKAAL 270
>gi|256752529|ref|ZP_05493385.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748595|gb|EEU61643.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 292
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA+TK++GLI PV HS P++HN F ++ N +Y V + L++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++K+ D + A I AVNT++ +G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVISEEALKIGAVNTVVNE--EGILKGYNTDV------------ 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 236 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|219854261|ref|YP_002471383.1| hypothetical protein CKR_0918 [Clostridium kluyveri NBRC 12016]
gi|219567985|dbj|BAH05969.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 296
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 31/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T + GLI PV HSK P+++N F +N + +Y+ V + + + +
Sbjct: 12 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K V+K+ DE+ P A+ I AVNTI+ +GKL G+ TD + ++++
Sbjct: 72 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVN--DNGKLTGHITDGVGFVRSLKEE-- 127
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 340
G + G+ + G+GGA A+ G++ + IF+I +ERA+
Sbjct: 128 -----------GVEVKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 176
Query: 341 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 392
++ +V D+ LN + IL NAT +GMHPN D + + ++ R
Sbjct: 177 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKE 236
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT+ LK AEAAG IV G+ M L Q F L+TG E P + ++E+
Sbjct: 237 LVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKEL 293
>gi|429761248|ref|ZP_19293678.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|429184272|gb|EKY25295.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 291
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 341
G + G+ V+ GAGGA A+ GA+ + IF D FERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 342 LASDVMGAARPFE---------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
+ + + D + + + IL N T LGM P D +S+ T+
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 393 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LV D VY P +T+ L++A+ G I V G M L Q + F LFTGK+ P + ++E
Sbjct: 229 GLVVADVVYNPEETKFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|428213951|ref|YP_007087095.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
gi|428002332|gb|AFY83175.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
Length = 288
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ G+I PV HS P++HN + + +Y+P V DL + +++
Sbjct: 4 ITGTTQLLGVIGYPVKHSLSPVMHNAAITDMGVDFVYLPWPVAPSDLPTAIAGFAAIGVR 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFS+ P+K+A+M E+ P+AQA+ AVNT+ R P+ G NTD E + +
Sbjct: 64 GFSITIPHKQAIMPLLSEISPVAQAVGAVNTVWRTPTGWA--GTNTDVEGFLAPL----- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
K G + LA V+ G GGA RA+ G G A++ + + ++ ++ +
Sbjct: 117 ----KGGDRPWHQTLA----VILGCGGAARAVVAGLAQLGCAKICVVGRNLDKLQAFQTS 168
Query: 346 VMGAARP-------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDYQLV 395
+ P + ++ P+ G +L N+TP+GM P+ PV+ + TL +
Sbjct: 169 WQDSPWPVNLSVHDWSELPQLLPQAG-LLVNSTPVGMSPDVGHSPVTPDLLATLPQGAIA 227
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+D +YTP T L+ A+A G + + G EM ++Q ++ + P + M +
Sbjct: 228 YDLIYTPSPTEFLRQAQAVGLLAIDGSEMLVQQGAAALQIWLDRPVPIDIMGQ 280
>gi|340624235|ref|YP_004742688.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
gi|339904503|gb|AEK19945.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
Length = 278
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 25/294 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN+ TK+ GLI PV HS P++HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPLMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDSDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K G L + ++ G+GGA RA++F ++ + I + + E+A++L+ ++
Sbjct: 117 ----KTGI------LYDKNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 347 MGAARPFEDILNF-----QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 400
G + E+ LN+ E I+ N TP+GM+P+T+ PV ++ +V D +Y
Sbjct: 166 SGKLKK-ENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIY 224
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P + LK+A+ GA ++G+ M + Q F ++TG + M++ +++K
Sbjct: 225 NPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGVKPDIYVMKKSIISKI 278
>gi|194016640|ref|ZP_03055254.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194012113|gb|EDW21681.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 300
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 154/303 (50%), Gaps = 36/303 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 225
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSARYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 341
GY G LAG+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 342 LASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 389
+ + + P ED F+ E + AILAN T LGM P D++ + ++TL
Sbjct: 173 NVTYINEEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 390 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
R+ +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P + ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 448 EIV 450
+I+
Sbjct: 292 QIL 294
>gi|289578257|ref|YP_003476884.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|297544537|ref|YP_003676839.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289527970|gb|ADD02322.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|296842312|gb|ADH60828.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 284
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 142/281 (50%), Gaps = 28/281 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 225
IN+ TK+FGLI PV HS P++HN F+ +N N +Y +F + L+ +
Sbjct: 2 EINSKTKLFGLIGHPVEHSLSPLIHNYAFKSLNLNYVYTVFDVFPEKLEDAVKGIKALGI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 62 KGVNVTIPHKEKIIKYLDVVSEEALKIGAVNTLVNE--EGILKGYNTDV----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS 344
G+ + G + G+ V+ GAGGA +A+ A + +VI + + E+AK L+
Sbjct: 109 --YGFIDSLTEVGEKIKGKKAVVLGAGGASKAVCVALALEKINEIVIANRNVEKAKELSE 166
Query: 345 DVMGAARPFEDILNF----QPEK---GAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 397
+ R F+ N+ + EK IL N T +GM+PN + PV E+ + + V+D
Sbjct: 167 YI---KREFKVSCNYCSINEVEKIPEMDILVNTTSVGMYPNVEDSPVCEKVVSRAKFVYD 223
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
+Y P +T LK A+ G +G+ M + QA F L+TG
Sbjct: 224 VIYNPFETVFLKYAKRNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|153953639|ref|YP_001394404.1| shikimate 5-dehydrogenase [Clostridium kluyveri DSM 555]
gi|146346520|gb|EDK33056.1| AroE3 [Clostridium kluyveri DSM 555]
Length = 289
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 31/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T + GLI PV HSK P+++N F +N + +Y+ V + + + +
Sbjct: 5 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K V+K+ DE+ P A+ I AVNTI+ +GKL G+ TD + ++++
Sbjct: 65 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVN--DNGKLTGHITDGVGFVRSLKEE-- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 340
G + G+ + G+GGA A+ G++ + IF+I +ERA+
Sbjct: 121 -----------GVEVKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 169
Query: 341 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 392
++ +V D+ LN + IL NAT +GMHPN D + + ++ R
Sbjct: 170 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKE 229
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT+ LK AEAAG IV G+ M L Q F L+TG E P + ++E+
Sbjct: 230 LVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKEL 286
>gi|386759165|ref|YP_006232381.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
gi|384932447|gb|AFI29125.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
Length = 280
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIKALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNSPKKFDICNRTLEKAKRLTEST--P 165
Query: 350 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSLKEAEERLEQYDVIIHTTSVGMYPNVDEVPLSLQRAASSAVVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 226 TALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRTIVIGKL 275
>gi|289432356|ref|YP_003462229.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452203313|ref|YP_007483446.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
gi|288946076|gb|ADC73773.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452110372|gb|AGG06104.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
Length = 286
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESNIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|365891052|ref|ZP_09429522.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365333035|emb|CCE02053.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 293
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 139/278 (50%), Gaps = 25/278 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD A+E I G
Sbjct: 75 YPYKEAVVALLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTTGFERAVEPLISRTG-- 130
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDV-MGA 349
GR+ L GAGG G+A+AF + G + + IFD + RA LAS + G
Sbjct: 131 -----------GRVVALIGAGGVGKAIAFALANLGVSDLRIFDTERARADKLASLLPAGP 179
Query: 350 ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
+ D + Q +GA+ + N TP+GM PN PV + LR V DAVY+P T LL
Sbjct: 180 SITVADSVE-QALQGAVGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTPLL 237
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
K A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 238 KAAKAKGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|261402316|ref|YP_003246540.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
gi|261369309|gb|ACX72058.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
Length = 283
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 155/289 (53%), Gaps = 27/289 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TKV GLI PV HS PI+HN F+ N +YV V + L S
Sbjct: 2 INAKTKVVGLIGHPVEHSFSPIMHNTAFKDKKLNYVYVAFDVLPEHLGDAIKGAKSLGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K VMK+ DE+ A+ I AVNT+ + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNITIPHKIEVMKYLDEIDKDAKLIGAVNTV--KIDNGKAIGYNTDGIGARRALEEEIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + G+ V+ GAGGAGRA+AF ++ R++I + E+AK+LA ++
Sbjct: 120 E-------------VKGKNIVVYGAGGAGRAVAFEL-AKNNRIIIANRTIEKAKNLAKEI 165
Query: 347 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
G F D LN I+ NATP+GM+PN D P V + LR+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSD-LNVDLSDVDIVINATPIGMYPNVDVEPIVKADKLREDMVVMDL 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
VY P +T LLK+A+ A A ++G+ M + Q F ++TG E E MR
Sbjct: 225 VYNPLETVLLKEAKKANAKAINGLGMLIHQGAVAFKIWTGVEPNVEVMR 273
>gi|289435577|ref|YP_003465449.1| shikimate 5-dehydrogenase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171821|emb|CBH28367.1| shikimate 5-dehydrogenase, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 289
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNL 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 340
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVTVAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQ 168
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
S+ +V D+ L + IL NAT +GMHP PV + T+
Sbjct: 169 TVASIKQEVPNCIVRIYDLNDTEKLYAEIATSNILVNATLVGMHPYESETPVKDATVFHK 228
Query: 393 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P E ++E+
Sbjct: 229 DLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|254976300|ref|ZP_05272772.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-66c26]
gi|255093686|ref|ZP_05323164.1| shikimate 5-dehydrogenase [Clostridium difficile CIP 107932]
gi|255315436|ref|ZP_05357019.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-76w55]
gi|255518101|ref|ZP_05385777.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-97b34]
gi|255651217|ref|ZP_05398119.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-37x79]
gi|260684282|ref|YP_003215567.1| shikimate 5-dehydrogenase [Clostridium difficile CD196]
gi|260687941|ref|YP_003219075.1| shikimate 5-dehydrogenase [Clostridium difficile R20291]
gi|384361925|ref|YP_006199777.1| shikimate 5-dehydrogenase [Clostridium difficile BI1]
gi|260210445|emb|CBA64887.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
CD196]
gi|260213958|emb|CBE06042.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
R20291]
Length = 287
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 337
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 338 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|375363099|ref|YP_005131138.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266178|ref|YP_005421885.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265565|ref|ZP_10043652.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387899199|ref|YP_006329495.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|421730915|ref|ZP_16170041.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346228|ref|YP_007444859.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371569093|emb|CCF05943.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499531|emb|CCG50569.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150061|gb|EIF13998.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387173309|gb|AFJ62770.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|407075069|gb|EKE48056.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849986|gb|AGF26978.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 280
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|392941090|ref|ZP_10306734.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
gi|392292840|gb|EIW01284.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
Length = 292
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 138/279 (49%), Gaps = 24/279 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA+TK++GLI PV HS P++HN F ++ N +Y V + L+ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 346 VMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
+ + D + PE +L N T +GM+PN + PVSE + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVEEIPEID-MLVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIY 234
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
P +T LK A+ G +G+ M L QA F L+TG+
Sbjct: 235 NPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|73748307|ref|YP_307546.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
gi|123620202|sp|Q3ZZN3.1|AROE_DEHSC RecName: Full=Shikimate dehydrogenase
gi|73660023|emb|CAI82630.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 286
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|126700322|ref|YP_001089219.1| shikimate 5-dehydrogenase [Clostridium difficile 630]
gi|115251759|emb|CAJ69594.1| Shikimate dehydrogenase 2 [Clostridium difficile 630]
Length = 287
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 340
GY G + G+ + GAGGA A+ GAR + IF D ++RA+
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|452856329|ref|YP_007498012.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080589|emb|CCP22352.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 280
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|14520666|ref|NP_126141.1| shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|24211539|sp|Q9V1H7.1|AROE_PYRAB RecName: Full=Shikimate dehydrogenase
gi|5457882|emb|CAB49372.1| aroE shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|380741199|tpe|CCE69833.1| TPA: shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
Length = 264
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 23/282 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
KV+GLI KPV HS P++HN FR + +YV V++L K + +G +V P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE V KF DE+ A+ I +VNTII +G LIGY TD + A+E
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTIIN--LEGSLIGYTTDGVGARKALERF--------- 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DVMGAARP 352
+ + GR ++ GAGGAG+A+A+ S+ A +V+ + +AKSL V G +
Sbjct: 111 -----TEIEGRNVLILGAGGAGKAIAY-ELSKIANIVVLNRTPSKAKSLEKFGVKGGS-- 162
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+++ N+ +L NAT +GM N VP LR +V D VY P KTRLL+DAE
Sbjct: 163 LDELPNYVGW-ADVLINATSVGMGTNESLVP--RRLLRRELIVMDIVYKPLKTRLLRDAE 219
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G ++ G+ M + Q F L+TG E MR + L +
Sbjct: 220 SVGCRVIDGLWMLIYQGAESFKLWTGIYPDVELMRRVSLERL 261
>gi|157693067|ref|YP_001487529.1| shikimate 5-dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681825|gb|ABV62969.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 280
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I PVGHS P +HN + +G Y V DDLK + + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAINGMKALGISGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K +M++ D++ A+ + AVNT+ R +G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEEGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 349
PL F+L GAGGA RA+ + FDI E+A++L G
Sbjct: 117 -------PLTELSFLLIGAGGAARAIYTTIADYAPKS--FDITNRTIEKAEALIKSADGN 167
Query: 350 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
L E+ ++ + T +GMHPN + P+S + +V D VY P +T+
Sbjct: 168 ITSSAITLKTAEEQLGEYDVIIHTTSIGMHPNVEETPISLANAKKTAVVCDIVYNPIETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL++A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDVRKMKSIVIQKL 275
>gi|158336295|ref|YP_001517469.1| shikimate 5-dehydrogenase [Acaryochloris marina MBIC11017]
gi|158306536|gb|ABW28153.1| shikimate 5-dehydrogenase, putative [Acaryochloris marina
MBIC11017]
Length = 292
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 34/305 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTF--------RHVNYNGIYVPMFVDDLKKFFST 219
I TK+ G++ PV HS P++HN R + Y I +P+ L S+
Sbjct: 3 QITGATKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPLPVTAHALPAVVSS 62
Query: 220 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 279
GF++ P+K+A+M E +A+A+ AVNT+ P+D G NTD E ++
Sbjct: 63 LRELGCCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLS 120
Query: 280 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 335
++ R + T + G GGA RA+ G G V
Sbjct: 121 PLQPL--NRDWSTITPC-----------ILGCGGAARAVLAGCAQLGCLQVHIIGRQPAK 167
Query: 336 FERAKSLASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETL 389
E KS + + +ED+ P+ A+L N TP+GM P+ P+S + L
Sbjct: 168 LEHLKSTCATTLSIDIQIHLWEDLAPLLPQ-AALLINTTPVGMSPHIQASPLSAVEIDQL 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V+D +YTP T LLK +A+G I ++GVEM ++Q +L+ + AP + MRE
Sbjct: 227 PKEAIVYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 450 VLAKF 454
+LA F
Sbjct: 287 LLACF 291
>gi|312127119|ref|YP_003991993.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
gi|311777138|gb|ADQ06624.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
Length = 281
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 39/291 (13%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTY-SSPDFAGFSVGFP 233
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNTILSEFDIDAIYSNLELSDTEKLKEFVEMVRKDKDVVGFNITIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +++FCDEV + I A NT+ + DGK + YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKFLAYNTDW-------------IGFKKS 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 352
G + + ++ G+GGA +A +G GA+ V I + +E+A++L +
Sbjct: 111 LEDRGGDVKDKKILILGSGGAAKACIYGLYRMGAKEVFIANRTYEKAQALR-------QQ 163
Query: 353 FEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLR-DYQLVFDAVYTPR 403
+++I++ + K + IL N TP+GM+P+ D P++ TL +LV+D +Y P
Sbjct: 164 YKEIVDLKIIKWSEIENVSYDILINTTPIGMYPDVDISPIN--TLNFTVELVYDMIYNPY 221
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI-VLAK 453
KT+LL+ AE G I++G+ M + QAI ++ G E KE + I LAK
Sbjct: 222 KTKLLQLAEINGKKILNGLPMLIYQAIEAEKIWFGIEPDKEMVSLIHTLAK 272
>gi|347549627|ref|YP_004855955.1| putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982698|emb|CBW86717.1| Putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 289
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAITAMKTFNL 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 341
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVDIAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDNFYQKAKQ 168
Query: 342 LAS-------DVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDY 392
+ D + D E IL NAT +GMHP + PV + T+
Sbjct: 169 TVTSIKKEVPDCIVHIYDLNDTEKLYAEIATSDILVNATLVGMHPYENETPVKDATIFSK 228
Query: 393 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P ++E+
Sbjct: 229 DLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKEL 286
>gi|210615766|ref|ZP_03290747.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
gi|210150102|gb|EEA81111.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
Length = 292
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 30/296 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I T++ GL+ PV HS P++HN F+ + + Y+ V D LK + +
Sbjct: 7 QITGHTRLTGLLGSPVEHSISPMMHNEAFQQLGLDYAYLAFDVGTDKLKTAVEGLRTLNV 66
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF++ P K + CD++ P A+ I AVNT++ +G LIGY TD + A++DA
Sbjct: 67 RGFNLTMPDKNLMCSLCDKLSPAAEIIGAVNTVVN--DNGVLIGYTTDGVGYMHAVKDA- 123
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 341
G + G+ L GAGGA A+ A G + + +F++ F RA+
Sbjct: 124 ------------GHNIIGKKMTLLGAGGAATAILVQAALDGVSEISVFNVRDDFFARAEK 171
Query: 342 LASDVM----GAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 393
+D+ R F+ DIL + + AIL N T +GM P+TD + + ++
Sbjct: 172 TVADLNERTNCKVRLFDFENPDILKREISESAILTNGTSVGMSPDTDACIIKDTSVFHKD 231
Query: 394 LVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L+ D +Y P +T+LL+ A+ AG +G+ M L Q F L+TGKE P ++E
Sbjct: 232 LIVSDVIYNPEETKLLRLAKEAGCPTFNGLYMLLYQGAEAFRLWTGKEMPIPVIKE 287
>gi|452204749|ref|YP_007484878.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
gi|452111805|gb|AGG07536.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
Length = 286
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K ++K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEIIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|270307833|ref|YP_003329891.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
gi|270153725|gb|ACZ61563.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
Length = 286
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F++ N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSISPAMQNAAFKYCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDVLDPAAKKIGAVNTIVNE--NGVLKGYNTDFGGFVRLLE--------HN 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A+A + G R+ + E+AK LAS + G
Sbjct: 118 RIAP-----AKHCFALLGAGGSAHAIALAICTLGGRLTVLARQEEKAKDLASKMCLRFNG 172
Query: 349 AARPFE-DILNFQP--EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + V LR V DA+Y P KT
Sbjct: 173 KAQGLELNDTNLEEVLAETDIIVNCTPVGMGNLAGQSLVPARFLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLLK+AE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 233 RLLKEAENKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAELA 280
>gi|225027299|ref|ZP_03716491.1| hypothetical protein EUBHAL_01555 [Eubacterium hallii DSM 3353]
gi|224955382|gb|EEG36591.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 286
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 26/293 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ +TK+ L+ P+ S + N + N IY V++ L + +FA
Sbjct: 4 VDINTKMITLLGDPLKQSFAAQMQNCGYEAAGLNMIYFYTEVNNEHLADVVNGIRYMNFA 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K V+++ DE+ PL + + A NT+++ P +GKL+GYNTD I ++E
Sbjct: 64 GFAVTKPNKVKVLEYLDELDPLCEKMGASNTVVKTP-EGKLVGYNTDGIGFIRSME---- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
++G ++ G+GGAGRA+ GA+ + I D+ E +KSL D
Sbjct: 119 ----RDGNVKIDE----NIYFCIGSGGAGRAMCSALAYYGAKKIYITDVFEESSKSLVED 170
Query: 346 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
+ + F + F P ++ ++ NA+ +GM + P+ +E + Q FDA
Sbjct: 171 I---NKNFAPVAEFCPAGDFSKVKEATVVLNASGIGMGSHIGENPLPKEFISKDQFYFDA 227
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
Y P KT+ L DAE AGA I++G+ M L Q Q +TG+E P E MR+ +L
Sbjct: 228 CYNPAKTQFLLDAEEAGATILNGLGMSLYQGAAQIEYWTGQEPPIEAMRQKLL 280
>gi|392989569|ref|YP_006488162.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
gi|392336989|gb|AFM71271.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
Length = 287
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 36/298 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ G +KP HS P++HN F H + +Y+ VD +L++ + + D
Sbjct: 2 ISGKTKLTGFFAKPASHSLSPLMHNLAFSHWGIDAVYLAFEVDQTNLRQAVESIRTLDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K AV+ + D++ P A+ I AVNTI+ + + +LIGYNTD
Sbjct: 62 GVNVSMPNKTAVLAYLDQLSPEAELIGAVNTIVHQ--EQRLIGYNTDG------------ 107
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL---- 342
G+ G P+ + V+ GAGGA +A+ GA+ + ++R +
Sbjct: 108 -MGFVRSVNETGHPIKNQKIVVLGAGGAAKAIVVQMALEGAQEITI---YKRLNATFLPL 163
Query: 343 ------ASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 391
S+ G D L + +L NAT +GM D++P+++ L
Sbjct: 164 KEYFVKVSEKTGCPIRLHDYADESQLALDLSQANLLINATDIGMGSKKDQLPIADVKLLH 223
Query: 392 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
QL VFD +Y+P +TRL+++A+ G +G+ M + Q F L+T +E P + +RE
Sbjct: 224 SQLAVFDLIYSPSETRLIQEAKKMGIKAYNGLGMLIHQGAIAFELWTHREMPVQNIRE 281
>gi|449095061|ref|YP_007427552.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
gi|449028976|gb|AGE64215.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
Length = 280
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLENAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|428775357|ref|YP_007167144.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
gi|428689636|gb|AFZ42930.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
Length = 283
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 28/292 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+ + +Y+P+ V DL++ + +++ D
Sbjct: 2 ITGKTKLLGVIGDPVEHSLSPVMHNAVLNHLGLDYVYLPLPVKKGDLERALAGFTAIDLV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+ P+K+A++ + + + P AQ + AVNT+ R ++ G NTD + I ++
Sbjct: 62 GFNATIPHKQAIIPYLNRITPEAQQVGAVNTVWR--TEAGWEGTNTDVDGFIAPLKSL-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ + N T V+ G GGA RA+ G G + + + + E+ + S
Sbjct: 118 DQDWSNITP-----------VILGNGGAARAVIVGCAKLGCSEIAVVGRNQEKLEQFKSS 166
Query: 346 -----VMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLVF 396
V A + + + L + +L N TP+GM P+ D PV E L++ + +
Sbjct: 167 WANTGVSAAIKTYLWEELPHLVSQTQLLVNTTPIGMSPDADASPVEREILKELPNCAIAY 226
Query: 397 DAVYTPRKTRLLKDAE-AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
D +YTPR TRLL+ A+ A A+ G+EM ++Q ++ + P E MR
Sbjct: 227 DLIYTPRPTRLLQLAQDNANAVTFDGLEMLIQQGAAALEIWLQQPIPVEIMR 278
>gi|145577921|gb|ABP82679.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKAAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|145577949|gb|ABP82693.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tohokuensis]
Length = 238
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 30/254 (11%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R D KLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DRKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------ASDVMGAARPFE 354
+ +L GAGGA RA+ F G + + I + E+A L S + R E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
+ N+ I+ + T +GMHP+ P+ +L+ +V D +Y P +T+LL+DA+A
Sbjct: 167 EQGNYD-----IIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAK 221
Query: 415 GAIIVSGVEMFLRQ 428
GAI+ +G++MF+ Q
Sbjct: 222 GAIVQNGIDMFVYQ 235
>gi|409994164|ref|ZP_11277283.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
gi|409934994|gb|EKN76539.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
Length = 285
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++ +
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKALNR 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQS 167
Query: 346 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 396
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLNSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|319938856|ref|ZP_08013220.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
gi|319811906|gb|EFW08172.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
Length = 284
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 343
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VITGKKMVMLGAGGAATAIIIQAVLDGAEEIFVFTRQSSFERVSQKM 165
Query: 344 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
++ AA+ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTAAKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A+ +V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQDVEVVNGLGMLLYQAAEAFKLWTGKEMPTKKIWQTLEKKY 283
>gi|221310491|ref|ZP_03592338.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314815|ref|ZP_03596620.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319737|ref|ZP_03601031.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324015|ref|ZP_03605309.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767590|ref|NP_390444.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|418032255|ref|ZP_12670738.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430756355|ref|YP_007208894.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915012|ref|ZP_21963638.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
gi|251757241|sp|P54374.2|AROE_BACSU RecName: Full=Shikimate dehydrogenase
gi|225185218|emb|CAB14508.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471118|gb|EHA31239.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959814|dbj|BAM53054.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|407965389|dbj|BAM58628.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7003]
gi|430020875|gb|AGA21481.1| Shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115360|gb|EME05756.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
Length = 280
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKL 275
>gi|145577937|gb|ABP82687.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar bolivia]
gi|145577943|gb|ABP82690.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|319651634|ref|ZP_08005761.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317396701|gb|EFV77412.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 31/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FG+I P+ HS P +HN F + + Y + ++L + + AGF+V
Sbjct: 3 KLFGVIGDPISHSMSPAMHNDLFAAYSLDAHYQAFHISRENLTDAIIGFRAMGIAGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ DE+ PLA+AI AVNT++ + GKLIGYNTD GY
Sbjct: 63 VPHKEAIIPLLDELDPLAEAIGAVNTVVNQ--TGKLIGYNTDGS-------------GYV 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
G + + + ++ GAGGA RA+ F G ++ I + +RA+ + +D
Sbjct: 108 KGLLNQKQSIKDKKVLIVGAGGAARAIYFTIAKEGPELLDICNRTPKRAEQIINDC---- 163
Query: 351 RPFE---DILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
PF +L+ +G++ + T +GMHP + P+S L+ V D +Y P
Sbjct: 164 -PFRVPARVLSRPDAEGSLETYDLIVQTTSIGMHPEIGQSPLSVHKLKPGAFVSDIIYNP 222
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T+LL +A GA I +G++MF+ Q F ++TG E MR VL +
Sbjct: 223 LETKLLTEAAEKGAGIQNGIDMFVYQGALAFEMWTGIGPDIERMRHKVLNQL 274
>gi|376007198|ref|ZP_09784399.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
gi|375324390|emb|CCE20152.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
Length = 285
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDQGWSGTNTDVAGFLAPLKDLNF 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 346 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 396
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|434386886|ref|YP_007097497.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
gi|428017876|gb|AFY93970.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
Length = 298
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 223
+ I TK+ G+I P+ H+ P++HN + + YV V +L + +++
Sbjct: 1 MPQITGTTKLLGVIGNPIAHTFSPVMHNAAIAALGLDYRYVAFDVTPANLATALAGFAAI 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
G SV P+K+AVM ++ PLA+A+ AVNTI P G NTD I ++
Sbjct: 61 GVVGCSVTIPHKQAVMPLLKDISPLAKAVGAVNTIWNAPEGWH--GTNTDIPGFIAPLKA 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKS- 341
++ G ++ G GGA RA+ G G R + +F D + +
Sbjct: 119 MTRDWGETTA-------------LILGNGGAARAVVAGCHQLGCRSIRVFGRDAAKLAAF 165
Query: 342 -----------LASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVP 383
LASDV P E ++ E G +L N+TP+GMHP+T P
Sbjct: 166 GESWQDIQLGRLASDV---PVPVELYVHLWDELGTFIDRENLLLVNSTPIGMHPHTMDSP 222
Query: 384 VSEETLRDY---QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+S E + + +D +YTPR T+ L+ A+ GAI + G+EM ++Q F L+ +
Sbjct: 223 ISGEMMAKIGANSIAYDLIYTPRPTKFLQLAQGHGAIAIDGLEMLIQQGAIAFELWLQQA 282
Query: 441 APKEFMREIVL 451
AP + MR+ +L
Sbjct: 283 APSDIMRQALL 293
>gi|411120996|ref|ZP_11393368.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
gi|410709665|gb|EKQ67180.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
Length = 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ P+ HS PI+HN + + +Y+P V +DL + + +++
Sbjct: 2 ITGTTKLLGVVGHPIEHSLSPIMHNAAIAQLGVDYVYLPFPVKPEDLSQALAGFAAIGVQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+++M+ ++ PLAQA+ AVNT+ R S+ G NTD
Sbjct: 62 GFNVTIPHKQSIMRLLSDISPLAQAVGAVNTVWR--SETGWHGTNTDVA----------- 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
G+ S + + ++ G GGA RA+ G G RV + D RAK
Sbjct: 109 --GFLAPLRSLRADWSQTEVLILGIGGAARAVVAGCAELGCTRVRVVGRD--RAKLEQFQ 164
Query: 346 VMGAARP---------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ--- 393
A P +E + + P G I+ N TP+GM PN D+ P+S E + Q
Sbjct: 165 HSWAHSPIMVNLQTHLWEALPSLLPMAGLIV-NTTPIGMFPNVDQSPISLEYILHLQPGT 223
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ +D +YTP TR L+ A GAI + G+EM ++Q L+ + P + MR
Sbjct: 224 IAYDLIYTPSPTRFLQYAAEHGAITLDGLEMLVQQGAAALELWLQESVPVDVMRR 278
>gi|209524414|ref|ZP_03272963.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
gi|209495205|gb|EDZ95511.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKDLNF 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 346 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 396
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|366166816|ref|ZP_09466571.1| shikimate dehydrogenase [Acetivibrio cellulolyticus CD2]
Length = 294
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 25/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
+ T++ GLI PV HS P LHN + + +YVP+ VD +L+ + DF
Sbjct: 7 VTGKTRLLGLIGNPVEHSVSPQLHNSLSLLLGLDLLYVPLKVDKENLEVVVKALKAVDFV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V PYK +MKF D+ A + +VNT+ + +G+L GYNTD E + A ++A
Sbjct: 67 GFNVTIPYKRDIMKFIDDNTKEAILMGSVNTV--KKIEGRLYGYNTDGEGFLRAFKEAA- 123
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ G+ V+ GAGGA R +A GA ++ I + +++ LA
Sbjct: 124 -----------GTGFKGKKVVMIGAGGAARPIAVKIAMDGAEKISIVNRTTQKSVELAEV 172
Query: 346 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFD 397
V + NF+ E+ I+ N T +GM P+ D+ P+ + R Q+V+D
Sbjct: 173 VNENVAEIVQVYNFEDKTLKMAFEESDIIINTTSVGMSPDIDKSPIENIDYFRSGQIVYD 232
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
VY P KT+ L DAE+ G + G+ M Q I + ++TG + ++ +++I
Sbjct: 233 IVYNPSKTKFLADAESRGCKAIGGLGMLFYQGINSYEIWTGVKFSEKDLKDI 284
>gi|398307025|ref|ZP_10510611.1| shikimate 5-dehydrogenase [Bacillus vallismortis DV1-F-3]
Length = 280
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGYYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMNYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F +R + I + E+AK L +
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTE----S 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
A F +++L+ E+ ++ + T +GM+PN + P+S + +V D VY P
Sbjct: 164 APSFHNKEVLSMTEAEKRLEQYDVIIHTTSVGMYPNVEDAPLSLQHAASCAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TGKE E MR IV+ K
Sbjct: 224 IQTALLKEANQNGLKTLDGVGMFVEQAALSFQLWTGKEPDIEKMRSIVIGKL 275
>gi|384160214|ref|YP_005542287.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384165143|ref|YP_005546522.1| shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|384169284|ref|YP_005550662.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328554302|gb|AEB24794.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|328912698|gb|AEB64294.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|341828563|gb|AEK89814.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + N NG Y V+ +LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDKNINGQYFAFQVEPHNLKDAVNGIKALGICGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ DE+ A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIDESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+ P++ ++ GAGGA RA+ + + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRKEPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 352 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F+ Q E+ ++ + T +GM+PNTD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLEEAENQLEQYDVIIHTTSVGMYPNTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T LK+AE G + G+ MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGIGMFVEQAALAFKLWTEQEPDSGLMRTIVEGKL 275
>gi|385839698|ref|YP_005877445.1| shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|300215389|gb|ADJ79802.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
Length = 291
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
G+ A G + G+ LAGAGGAG +A A G + + IF++D +E+A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWEQA 165
Query: 340 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 390
+ + +D ED +F+ E + I +AT +GM P D V + +
Sbjct: 166 EKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPSWFH 225
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 450 VLAK 453
+ ++
Sbjct: 286 LFSE 289
>gi|260881130|ref|ZP_05893311.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260849607|gb|EEX69614.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 293
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 141/283 (49%), Gaps = 32/283 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK G++ P+ HS P+L N + +Y+ P+ + LK+ + + F+
Sbjct: 8 IKGTTKNLGVMGWPIAHSLSPVLQNAAIEEAGLDYVYISLPVPPEKLKEAVAGLRAMQFS 67
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G++V P+K+A+M D V A+ I AVNT++ R DG L GYNTDC
Sbjct: 68 GWNVTIPHKQAIMAELDVVDEDARIIGAVNTVVNR--DGHLTGYNTDC------------ 113
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASD 345
G+ A G G+ L GAGGA RA+ +G +++ R+ + + +A+ LA +
Sbjct: 114 -IGFMQPLAQQGFSPKGKAATLLGAGGAARAVIWGLLRAKVRRITLGVRNPAKAERLAEE 172
Query: 346 VMGAARPFEDILNFQPEKGA---------ILANATPLGMHPNTDRVP-VSEETLRDYQLV 395
+ +I E GA +L N TPLGM+P+ + +P V L+ LV
Sbjct: 173 FAS----YGEIQVLHWEDGAFLDHLAVTDLLVNTTPLGMYPHVEGMPPVDWTKLKKDALV 228
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
+D +YTP +TR L +A+A G I++G M Q F L+TG
Sbjct: 229 YDIIYTPERTRFLSEAQAHGHAIINGEGMLAGQGAAAFTLWTG 271
>gi|289191666|ref|YP_003457607.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
gi|288938116|gb|ADC68871.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
Length = 284
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 155/295 (52%), Gaps = 25/295 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ KN V+ GAGGA RA+AF ++ V+I + E+A++LA ++
Sbjct: 120 KVKDKN-------------IVIFGAGGAARAVAFEL-AKDNNVIIANRTVEKAEALAKEI 165
Query: 347 MGA-ARPFEDILNFQPEKGAILA-----NATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
+ F + + F + NATP+GM+PN D P V E LR+ +V D +
Sbjct: 166 SEKLNKKFGEEVKFSGLDIDLDGIDIIINATPIGMYPNVDVEPIVKAEKLREDMVVMDLI 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 226 YNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|1303789|dbj|BAA12445.1| AroD [Bacillus subtilis]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
P++ F++ GAGGA RA+ ++ + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTFVRNTPKKFDICNRTLEKAKRLTE----AT 164
Query: 351 RPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 165 PSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPI 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 225 QTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKL 275
>gi|255101876|ref|ZP_05330853.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-63q42]
gi|255307745|ref|ZP_05351916.1| shikimate 5-dehydrogenase [Clostridium difficile ATCC 43255]
gi|423092746|ref|ZP_17080550.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
gi|357553616|gb|EHJ35363.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
Length = 287
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 340
GY G + G+ + GAGGA A+ GAR + IF D ++RA+
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
++ DV D+ L + + IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIQSSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|359457721|ref|ZP_09246284.1| shikimate 5-dehydrogenase [Acaryochloris sp. CCMEE 5410]
Length = 292
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 34/305 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTF--------RHVNYNGIYVPMFVDDLKKFFST 219
I TK+ G++ PV HS P++HN R + Y I P+ + L S+
Sbjct: 3 QITGATKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPFPVTANALPAVVSS 62
Query: 220 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 279
GF++ P+K+A+M E +A+A+ AVNT+ P+D G NTD E ++
Sbjct: 63 LRELGCCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLS 120
Query: 280 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 335
++ R + T + G GGA RA+ G G V
Sbjct: 121 PLQPL--NRDWSTITPC-----------ILGCGGAARAVLAGCAQLGCPQVHMIGRQPAK 167
Query: 336 FERAKSLASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETL 389
E KS + + +ED+ P+ A+L N TP+GM P+ P+S + L
Sbjct: 168 LEHLKSTCATALSIDIQIHLWEDLAPLLPQ-AALLINTTPVGMSPHIQASPLSGAEIDQL 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V+D +YTP T LLK +A+G I ++GVEM ++Q +L+ + AP + MRE
Sbjct: 227 PQEAIVYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 450 VLAKF 454
+LA F
Sbjct: 287 LLACF 291
>gi|304314453|ref|YP_003849600.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
gi|302587912|gb|ADL58287.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 297
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 155/291 (53%), Gaps = 24/291 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I +T++ G+I P+ HS P +HN F+ + + YVP V L++ + +
Sbjct: 17 ITGNTQLTGIIGYPLTHSLSPQMHNAAFKALGMDWAYVPFPVKPSGLEEAVRGLRALNVR 76
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE+V+++ EV A I AVNT+ + D ++GYNTD + A+E+
Sbjct: 77 GVNVTIPHKESVLEYIGEVDETASLIGAVNTL--KFEDETIMGYNTDASGCLRALEEV-- 132
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ + G ++ GAGGA RA AF RGA V I + ERA++LA D+
Sbjct: 133 ------------TSVDGSSVIILGAGGAARACAFQLAVRGASVTILNRTPERARALAEDI 180
Query: 347 MGA-----ARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 400
GA +++ E IL + TP+GM+P+ D P V E + + +V+D VY
Sbjct: 181 KGALDIRVKYGGYELIPACVEGADILIDTTPVGMYPHMDDEPLVKAELMHEGLVVYDLVY 240
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
P +T LL++A AAGA+ VSG+ M L Q F +++G+E P + M + +L
Sbjct: 241 NPPETCLLREARAAGAVPVSGLRMLLYQGAEAFRIWSGREPPLDVMEKALL 291
>gi|389571866|ref|ZP_10161954.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
gi|388428352|gb|EIL86149.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I PVGHS P +HN + +G Y V DDLK S + +G +V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGINVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K +MK+ D++ A+ + AVNT+ R +L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMKYLDKIDVTAERLGAVNTV--RLEGDQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI---DFERAKSLASDVMGA 349
PL+ F+L GAGGA RA+ + FDI E+A++L G
Sbjct: 117 -------PLSELSFLLLGAGGAARAIYTTIAEYAPKQ--FDIANRTIEKAEALIESADGK 167
Query: 350 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
LN E+ ++ + T +GM+PN + P+S + +V D VY P +T+
Sbjct: 168 ITSRAIALNTAEERLGEYDVIIHTTSIGMYPNVEETPISLANAKKTAVVCDIVYNPIETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL +A G V GV MF+ QA+ F L+TG M+ IV+ K
Sbjct: 228 LLSEAAGLGLKTVDGVGMFVGQAVRAFELWTGITPDARKMKSIVIEKL 275
>gi|433654873|ref|YP_007298581.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293062|gb|AGB18884.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 283
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 156/295 (52%), Gaps = 26/295 (8%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
H+NA T ++G+I P+GHS P+LHN F +N N +Y+ ++ ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPLLHNAAFESINLNSVYISFDVYEENLKDAILGIKALGI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+KE V+K+ D V A+ I AVNTI + ++G L GYNTD +T ++I
Sbjct: 62 KGINVTVPHKENVIKYLDYVSDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESI 115
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 344
KE G + + G+ V+ GAGGA RA+A G G R ++I + ERAK+L+
Sbjct: 116 KEHGME---------VEGKNAVILGAGGAARAIAVGLSLTGVRSIIIANRSKERAKNLSD 166
Query: 345 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
D+ ++D+ + ++ IL NAT +GM PN + PV E + + V+D
Sbjct: 167 YIKNNLDINCTDVTYDDL--NELKEIDILINATSVGMSPNINLSPVDENVVVKAKFVYDI 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
+Y P KT L AE ++G +M + QA F ++TG K + I+ K
Sbjct: 225 IYNPEKTLFLSYAEKHKIRNLNGFDMLINQANHSFKIWTGVNFNKNIILNILKKK 279
>gi|384176190|ref|YP_005557575.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595414|gb|AEP91601.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 146/293 (49%), Gaps = 32/293 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLAS----- 344
P++ F++ GAGGA RA+ F R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 345 ---DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+V+ E + + ++ + T +GM+PN D VP+S + +V D VY
Sbjct: 168 HNKEVLSIKEAEERLGQYD-----VIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYN 222
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 223 PIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|384214801|ref|YP_005605965.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354953698|dbj|BAL06377.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 292
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 142/284 (50%), Gaps = 34/284 (11%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD G+
Sbjct: 75 YPYKEAVVPLLDELAPGAAAMGAVNTVVAR--DGRLIGHNTDTT-------------GFA 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 347
A +P +G + G GG G+A+AF S + + + IFD + RA+ LAS +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLKVSGLRIFDSETARAEKLASLLARHG 178
Query: 348 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
GA A+ ED L+ GA L N TP+GM PN +PV L + V DAVY+P
Sbjct: 179 GATVAKSVEDALD-----GATGLVNGTPVGMLPNRG-MPVPATLLHEKMWVADAVYSPLI 232
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
T LL A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEVMGE 276
>gi|423063524|ref|ZP_17052314.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
gi|406714956|gb|EKD10114.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
Length = 285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVTPDQLASAYRGFQAIGVQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKDLNF 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 346 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 396
+ + P + ++ N+Q + +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIRQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|145577905|gb|ABP82671.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|321312051|ref|YP_004204338.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
gi|320018325|gb|ADV93311.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKISIMDYLDHIDESAKLLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|414076194|ref|YP_006995512.1| shikimate dehydrogenase [Anabaena sp. 90]
gi|413969610|gb|AFW93699.1| shikimate dehydrogenase [Anabaena sp. 90]
Length = 288
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 148/295 (50%), Gaps = 31/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ G+I PV HS P++HN + + +Y+P V ++L++ + ++S
Sbjct: 2 ITGKTQLLGVIGHPVSHSLSPLMHNAALAKLGLDYVYLPFPVAPENLERAIAGFASIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFS+ P+K+A++ E+ P+AQAI AVNT+ R+ + +G NTD I ++
Sbjct: 62 GFSITIPHKQAILPLLSEISPIAQAIGAVNTVTRQGDN--WVGTNTDVAGFIAPLQ---- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ + + V+ G GGA RA+ G G A + + + ++ ++
Sbjct: 116 --------TTYHQDWSQKKAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLQAFTQS 167
Query: 346 VMGAARPFED---ILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQL 394
+ PF D + +Q + +L N TP+GM+P+ D P+S + L +
Sbjct: 168 WQNS--PFADKFQVHEWQELPNLLHQANLLVNTTPMGMYPHVDESPLSSQEMGYLPGDAI 225
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
V+D +Y P+ T+ L AE GAI++ G+EM ++Q ++ +E P MR+
Sbjct: 226 VYDLIYIPKPTKFLHLAEKQGAIMIDGLEMLVQQGAAALKIWLQQETVPVNEMRQ 280
>gi|374635880|ref|ZP_09707469.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
gi|373560842|gb|EHP87092.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
Length = 282
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 155/291 (53%), Gaps = 24/291 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++L+ +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLRYVIDGAKAMGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +M++ DE+ A+ I AVNTI + + K IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMEYLDEIDENAKLIGAVNTI--KIENNKAIGYNTDGLGARMALEEEI- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ + ++ GAGGA RA+AF ++ ++I + E+AKSLA +V
Sbjct: 119 ------------GKVVDKSIIIYGAGGAARAVAFEL-AKNNNIIIANRTIEKAKSLAEEV 165
Query: 347 MGAARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 400
E+ + + + I+ NATP+GM+PN D P V E + + +V D +Y
Sbjct: 166 REKLNKTEEEVKYSGLDASLDEIDIIINATPIGMYPNVDVEPIVKAEEMHNDMVVMDLIY 225
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
P +T LLK+A+ GA ++G+ M + Q F ++T ++ E M++ ++
Sbjct: 226 NPLETVLLKEAKKVGAKTINGLGMLIYQGAIAFEIWTNEKPSIEVMKDAII 276
>gi|52081116|ref|YP_079907.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644927|ref|ZP_07999160.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|404489997|ref|YP_006714103.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683093|ref|ZP_17657932.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
gi|81690974|sp|Q65H34.1|AROE_BACLD RecName: Full=Shikimate dehydrogenase
gi|52004327|gb|AAU24269.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348996|gb|AAU41630.1| shikimate dehydrogenase AroD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392736|gb|EFV73530.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|383439867|gb|EID47642.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
Length = 278
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 26/288 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 232
++GLI PV HS P +HN + ++ G Y V+ DL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K ++MK D + A+A+ AVNT+ RR +G L+GYNTD + +++
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNTV-RREKEG-LVGYNTDGAGFLKSLK---------- 111
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
S PL+ +L GAGGA RA+ A R+ + + E+A + G AR
Sbjct: 112 --PSLDRPLSELSILLIGAGGAARAIFTTLAAETPKRLDVANRTPEKALAFTQRFDGEAR 169
Query: 352 PFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
L+ Q + I+ T +GMHPN + P+S ++ LV D +Y P KT
Sbjct: 170 A----LSLQEAEADLSAYDIVIQTTSVGMHPNVEAAPLSLANAKETCLVCDIIYNPLKTA 225
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL +AEA G + GV MF+ QA F L+TG E E M+ IVL +
Sbjct: 226 LLHEAEAKGLKTLDGVGMFIGQAALAFELWTGHEPNMEKMKSIVLQQL 273
>gi|315222537|ref|ZP_07864426.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
gi|315188223|gb|EFU21949.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
Length = 284
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 144/299 (48%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK D
Sbjct: 3 IDGYTRLVAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYDMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 343
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGAEEIFVFTRQSSFERVSQKM 165
Query: 344 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
++ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMPTKEIWQALEKKY 283
>gi|384107652|ref|ZP_10008550.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
gi|383870508|gb|EID86110.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
Length = 498
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 211/451 (46%), Gaps = 47/451 (10%)
Query: 12 GGLYEGDEHKRL----EALHLAE---DLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 64
GGL+ G++ R AL A+ YVDFE +I Q ++ G R I S
Sbjct: 68 GGLWTGNDFSRTNLFGRALAFADPDKKRNFAYVDFEEDY--HIPSIQDAAMAFGVRIIRS 125
Query: 65 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQ---LLSHCQVPIIAY 121
C+ T +L M+ TG +I K+ F ++++ +F L+++ ++A
Sbjct: 126 CH--NMTEPIHNLRKRCDAMRKTGYEIPKIAFMPKTLSDVVNLFHESSLMTNYDHILVA- 182
Query: 122 SVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHINADTKVFG 177
+G G+ S++L+ N + Y S + T +G L Y + I+ T++FG
Sbjct: 183 -MGAEGMPSRILTSISNSYMTYTSPQETADKTASIGHIDPVVLNDLYNFKGISKSTQLFG 241
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 237
+ P+ + P +HN +RH + +Y P+ + + + D G SV P+KE+
Sbjct: 242 ITGWPLVKTSSPEIHNMGYRHHGIDAVYFPIRSQLISESLNFAEQLDVKGMSVTIPFKES 301
Query: 238 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 297
V+ + E+ P I A NT++R+ + K IGYNTDC T E A+ E
Sbjct: 302 VLYYLHELSPEVMQIGACNTVVRK--NYKWIGYNTDC----TGFERALLE--------FL 347
Query: 298 GSPLAGRMFVLA--GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS--DVMGAARPF 353
GS + + ++ GAGGA +A+A+ K G + IF+ E A+ LA D M AA+
Sbjct: 348 GSNVKTKKMKVSIIGAGGAAKAIAYTVKKLGMKACIFNRTLETAQKLAEKYDFM-AAKLD 406
Query: 354 EDILNFQPEKGAILANATPLGMH------PNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
E E +++ T +GM+ P D P+ R + VFD VY P T +
Sbjct: 407 ETSAMILDEYSSLIIQTTSVGMNAEGPISPEND--PIYFYKFRGTEKVFDIVYVPASTPV 464
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
++ A AAG + +G +M QA QF LFTG
Sbjct: 465 MRRASAAGCKVCNGYKMLEYQAYEQFKLFTG 495
>gi|225850624|ref|YP_002730858.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
gi|225646318|gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
Length = 281
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 29/291 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN +T+V+G+ PV HSK P+ N F ++ N +Y+P V +DLK +
Sbjct: 5 INGETEVYGIFGYPVKHSKSPLFQNAAFSYLGINAVYLPFSVKPEDLKNAVEGIRALSIK 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+KE V+K +E+ + I A NTI + DG LI YNTD
Sbjct: 65 GVNITVPHKEEVLKLVNEISEEVKYIGASNTI--KNIDGYLIAYNTDA------------ 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ G ++G+ ++ GAGGA RA+ +G GA ++ I + +RA+ + D
Sbjct: 111 -YGFIQGLKELVENISGKKVLVIGAGGASRAVVYGLIKEGAEKIYISNRTLKRAEDIIRD 169
Query: 346 VMGAARPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFD 397
+R E IL P I+ N T +G+ + DR + +V D
Sbjct: 170 FSKLSRFTEKILEPLPLSQIEELLCNVDIIVNTTSVGLR-DEDRPLFDYSKIEKRHIVVD 228
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+Y RKT LLK AE G + G+ M L Q F ++TGK+AP M++
Sbjct: 229 IIY--RKTPLLKAAEEKGCLWQDGLPMLLYQGARSFEIWTGKKAPINIMKK 277
>gi|345302028|ref|YP_004823930.1| shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111261|gb|AEN72093.1| Shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 297
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 143/296 (48%), Gaps = 33/296 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I A T+ L+ PV HS P++HN FR + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPVALLGDPVAHSFSPLIHNTGFRTQGLDYVYLACRVPKDALPEAIAGLRALGFA 68
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK----LIGYNTDCEASITAIE 282
G +V P+KEAV D P A+AI AVNTI+ R +DG LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGTVALIGDNTDVE------- 120
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAK 340
G+ L G V+ GAGGA RA+ + + R R+ I R +
Sbjct: 121 ------GFLEPLQPLADRLTGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 341 SLASD--------VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRD 391
+LA+D + A P + + + ++ NATP+GMHP+ P E
Sbjct: 175 ALAADFATYDTHGALQVAAPDQAAPAIRSAR--LIVNATPVGMHPHVAASPWPHAEDFGP 232
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
Q+V+D VY P +TRLL++A GA + G+ M + QA + +TG E P+E ++
Sbjct: 233 EQIVYDLVYNPVRTRLLREAATRGATPIDGLTMLIGQAAAAYRQWTGHELPREAVQ 288
>gi|291571861|dbj|BAI94133.1| shikimate 5-dehydrogenase [Arthrospira platensis NIES-39]
Length = 285
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD A A A+
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDV-AGFLAPLKALN 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 119 CPNWHE-----------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQS 167
Query: 346 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 396
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLNSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|212638656|ref|YP_002315176.1| shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560136|gb|ACJ33191.1| Shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 299
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 147/286 (51%), Gaps = 22/286 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
K+F LI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 26 KLFALIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVEGLKALQCAGFNVT 85
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 86 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 138
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 350
L+G ++ GAGGA R + F K A + + + E+A++ A
Sbjct: 139 -------IELSGARILIIGAGGAARGIYFTLLKHEAATIDVCNRTPEKAETFIQKERSAV 191
Query: 351 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
E + GA I+ N T +GM+P+ D +P+S +TL+ +V D +Y P T+ L
Sbjct: 192 YSLEQA---EERLGAYDIIINTTSVGMYPHVDTMPISLQTLKSGTIVSDIIYNPLMTKFL 248
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++A+ GA + +GV MF+ Q F +TG + M ++V+ +
Sbjct: 249 QEAKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 294
>gi|145577935|gb|ABP82686.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar vazensis]
Length = 238
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPYVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|375086215|ref|ZP_09732637.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
gi|374566077|gb|EHR37330.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
Length = 286
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 38/290 (13%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 230
TK G+I P+ HS P++ N + ++Y I +P+ +DL+K + +F GF+V
Sbjct: 7 TKNLGVIGYPIKHSLSPVIQNTAIQEAGIDYAYIAMPIAPEDLEKAVIGLKALNFTGFNV 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +M++ DE+ +A+ I AVNT+ DGKL GYNTD +I I +KE
Sbjct: 67 TIPHKVNIMQYLDEIDEMAKLIGAVNTV--HIKDGKLYGYNTD---AIGFINPLLKEN-- 119
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDVMGA 349
+ + V+ GAGGA RA+ G +G + +I + + +A+ LA+D
Sbjct: 120 --------VEIKDKTAVILGAGGACRAVVCGLIKQGIKNIILAVRNLAKAQLLAND---- 167
Query: 350 ARPFEDILNFQP------------EKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVF 396
F D+++ + + +L N TPLGM N D + PV E+++ V+
Sbjct: 168 ---FNDLVDIKVCDWHSEEFKQYLAQADLLVNTTPLGMEGNIDSKPPVDWESVKKSAFVY 224
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
D VY P +T+ L++A+ G I++G M Q + +L+T K+ + M
Sbjct: 225 DIVYIPAETKFLQEAKEYGHKILNGERMLAEQGVAALHLWTDKDINVDIM 274
>gi|146342439|ref|YP_001207487.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146195245|emb|CAL79270.1| Putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 278]
Length = 293
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 139/281 (49%), Gaps = 31/281 (11%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGLRCHYQLIEVAGADRAGLSMLLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD T E A+
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDT----TGFERAV------ 122
Query: 292 NGTASFGSPLAGR----MFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDV 346
+PL G+ + L GAGG G+A+AF A A + I+DI+ RA+ LA V
Sbjct: 123 -------APLVGQSGRGVVALIGAGGVGKAIAFALANLEVAGLRIYDIERARAEKLAKLV 175
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
G D + + + N TP+GM PN PV++ LRD V DAVY+P T
Sbjct: 176 RAGTTVNVVDSVESALQGAVGVVNGTPIGMLPNRG-TPVADHLLRDDLWVADAVYSPLWT 234
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
LLK A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 235 PLLKAAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|296109340|ref|YP_003616289.1| shikimate 5-dehydrogenase [methanocaldococcus infernus ME]
gi|295434154|gb|ADG13325.1| shikimate 5-dehydrogenase [Methanocaldococcus infernus ME]
Length = 277
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 23/289 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++A TK+ GLI PV HS P++HN F+ N N +Y+ V + L+ +
Sbjct: 1 MDAKTKLVGLIGHPVEHSLSPVMHNAAFKDKNLNYVYLAFDVKPERLRFVVDGAKALGMV 60
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K ++K+ D++ A+ I AVNT+ + D IGYNTD + A+E+ I
Sbjct: 61 GFNVTIPHKVEIIKYLDQLSEEAKLIGAVNTV--KIEDDIAIGYNTDGIGARRALEEEI- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ + V+ GAGGA RA+AF ++ VVI + E+AK LA ++
Sbjct: 118 ------------GKVKDKKIVIFGAGGAARAVAFEL-AKDNFVVIANRTLEKAKKLAKEI 164
Query: 347 ---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTP 402
+ + D LN E I+ NATP+GM+PN + P VS+E LR +V D VY P
Sbjct: 165 EEKLNREVGYSD-LNVDLEDVDIVINATPVGMYPNVNEKPIVSKERLRKDMVVMDLVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+T LLK+A+ GA + G+ M + Q F ++TG E E MRE +L
Sbjct: 224 LETTLLKEAKKVGAKTIDGLGMLIYQGAEAFKIWTGVEPNIEVMRESIL 272
>gi|428768969|ref|YP_007160759.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683248|gb|AFZ52715.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
Length = 287
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 28/297 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
I TK+ G+I P+ HS P+ N +N + IYVP V+ +L++ F+T+ +
Sbjct: 2 QITGKTKLLGIIGNPIEHSMSPVFQNSAIASLNLDYIYVPFAVEKENLQELFNTFKAVKI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P+KE V+ F D + A+ I AVNT+ + + G NTD + I+ ++
Sbjct: 62 RGFNVTIPHKENVLPFLDYITETAKIIGAVNTVWLT-ENNQWHGTNTDIDGFISPLKSL- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAK---- 340
++ + N T PL + G GGA RA+ G G R + I + ++ K
Sbjct: 120 -DKNWANIT-----PL------VLGNGGASRAVIVGCSELGCREIKIVGRNLDKLKQFKA 167
Query: 341 SLASDVMGAA---RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 394
S A+ + A ++++ + P ++ N TP+GM+P+ + P++ + + + +
Sbjct: 168 SFANTTLKAEISIYTWDELTDLIPH-SQLIVNTTPMGMYPHISQSPLTSSQAQLICEDAI 226
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+D +Y PR T L+ AE GA I+ G EM ++Q F ++T AP MRE +L
Sbjct: 227 AYDLIYNPRPTLFLQQAEKQGAKIIDGSEMLVQQGAVAFEIWTHHPAPVAVMRESLL 283
>gi|339443500|ref|YP_004709505.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
gi|338902901|dbj|BAK48403.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
Length = 289
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 31/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ GLI PV HS P +HN FR + + +Y+ V + L
Sbjct: 4 ITGKTRLTGLIGTPVAHSISPQMHNEAFRTLGLDYVYLAFDVSREHLADAVRGLKEIGIR 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+AV K DE+ P AQ A NT+I DG+LIG+ TD DA++
Sbjct: 64 GFNVTMPHKQAVAKLADELTPAAQIAGACNTVINE--DGRLIGHTTDG----IGFMDAVR 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFE----RAKS 341
+ GY+ + G+ + G GGA A+ A G + + IF+ E A++
Sbjct: 118 DAGYE---------ITGKRMTILGCGGASTAICAQAALDGVSSIAIFEQPAEPFASHARA 168
Query: 342 LASDVM---GAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRDY 392
AS VM DI + + + I L NAT +GM PNT+ + + + LR
Sbjct: 169 FASRVMEHTACEVTVHDITDPEDLRSCIAASDLLTNATNVGMAPNTEGCLIPDSSFLRPG 228
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+V D +Y P+ T+L + AEAAG + +G+ M L Q F +TG++ P E +R
Sbjct: 229 LIVCDIIYNPQHTKLYQMAEAAGCSVFNGMYMLLFQGAASFQCWTGRQMPVEHIR 283
>gi|456353571|dbj|BAM88016.1| shikimate 5-dehydrogenase [Agromonas oligotrophica S58]
Length = 293
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAATLGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV++ DE+ P A+A+ AVNT++ R DG+LIG+NTD G++
Sbjct: 75 YPYKEAVVELLDELAPKAKAMGAVNTVVVR--DGRLIGHNTDTT-------------GFE 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
A S + L GAGG G+A+AF + G A + I+D + RA+ LAS ++ A
Sbjct: 120 RAVAPLVSETKRGVVALVGAGGVGKAIAFALANLGVAGLRIYDTERARAEKLAS-LLPAG 178
Query: 351 RPFEDILNFQPE-KGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
R + + + + +GA+ + N TP+GM PN PV ++ L V DAVY+P T LL
Sbjct: 179 RAYTVVDSVEAALQGAVGVVNGTPIGMLPNRG-TPVPDQLLHSDLWVADAVYSPLWTPLL 237
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
K A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 238 KAAKAKGARVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|329925883|ref|ZP_08280593.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
gi|328939534|gb|EGG35883.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
Length = 286
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 28/293 (9%)
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFS 229
D + G++ P+GHSK P +H+ + +G YVP+ + L + F G +
Sbjct: 8 DYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKALGFRGVN 67
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + +++D
Sbjct: 68 VTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSLKD------ 119
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG 348
L G+ V+ GAGGA R + + G ++ I + +A +LA +
Sbjct: 120 ------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALALAEEWSS 173
Query: 349 AARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
A D+ + E ++ N T +GM P +P+ E++R+ +V D +Y
Sbjct: 174 LA----DLRGYGEEDAGEALSDADVIINTTSVGMFPRISELPIPPESIREGIVVSDLIYN 229
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P KT LL+ E I G+ MF+ Q F +TG AP + M+E VL F
Sbjct: 230 PLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTSF 282
>gi|331092180|ref|ZP_08341010.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401952|gb|EGG81526.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 291
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 30/296 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
I+ T + GL+ PV HS P++HN +FR + N IY+ VD L+ + +
Sbjct: 4 QIDGHTILTGLLGSPVSHSISPLMHNESFRQLGLNYIYLAFDVDVNRLETAVEGLRALNV 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF++ P K + + CD++ P A+ AVNT++ DG L GY TD + ++++A
Sbjct: 64 RGFNLTMPNKNEMCRLCDKLSPAAKISGAVNTVVN--DDGVLTGYTTDGIGYMQSLKEA- 120
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD---IDFERAKS 341
G + G+ + GAGGA A+ A G R + +F+ F R +
Sbjct: 121 ------------GHDIIGKKMTMLGAGGASTAILVQAALDGVREISVFNNRSASFHRMEK 168
Query: 342 LASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 393
+ D+ + E IL + + +L N T +GM P+TD +++ +
Sbjct: 169 VIEDLKNVSDCEMHLYDYSDEHILRREISESVLLTNGTSVGMSPHTDASIITDADMFHKN 228
Query: 394 LVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L+ D +Y PR+T+LL+ A +G ++G+ M L Q F L+TGKE P E ++E
Sbjct: 229 LIVSDVIYNPRETKLLRMARESGCPTLNGLYMLLFQGAEAFKLWTGKEMPVEKIKE 284
>gi|427705993|ref|YP_007048370.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
gi|427358498|gb|AFY41220.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
Length = 290
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 31/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+ T++ G+I PV HS P++HN + + IY+P + ++L+ + +++
Sbjct: 4 VTGTTELLGVIGHPVEHSLSPVMHNAALAALGVDYIYLPFPIAPENLQIAIAGFATIGVT 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A+M E+ +AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 64 GFSVTIPHKQAIMPLLSEITLVAQAIGAVNTVTRK--NQQWVGTNTDIEGFIAPLQ---- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
++ + ++ ++ G GGA RA+ G G A + + + +R D
Sbjct: 118 --------TTYQQDWSQKVAIILGNGGAARAVVAGCYQLGFAEIHVVGRNEQRLIEF-RD 168
Query: 346 VMGAA--------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QL 394
G++ + ++ P+ +L N TP+GM+PN D P++ + D +
Sbjct: 169 SWGSSPIAEKLQVHTWPTLVKLIPQAN-LLVNTTPMGMYPNVDDSPLTAAEMNDLPSGAI 227
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+D +Y P+ T+ L+ AE GAI++ G+EM ++Q ++ +E P + MR+
Sbjct: 228 AYDLIYIPQPTKFLQQAEKQGAIVIDGLEMLVQQGAAALKIWLQQETVPVDVMRQ 282
>gi|261405559|ref|YP_003241800.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282022|gb|ACX63993.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 288
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 165 KVEHINA-DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYS 221
KV +N D + G++ P+GHSK P +H+ + +G YVP+ + L
Sbjct: 2 KVNPMNERDYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVK 61
Query: 222 SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 281
F G +V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + ++
Sbjct: 62 VLGFRGVNVTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSL 119
Query: 282 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAK 340
+D L G+ V+ GAGGA R + + G ++ I + +A
Sbjct: 120 KD------------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKAL 167
Query: 341 SLASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQ 393
+LA + A D+ + E+ ++ N T +GM P +P+ E++R+
Sbjct: 168 ALAEEWGSLA----DLRGYGEEQAGEALSDADVIINTTSVGMFPRVSELPIPPESIREGI 223
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
+V D +Y P KT LL+ E I G+ MF+ Q F +TG AP + M+E VL
Sbjct: 224 VVSDLIYNPLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTS 283
Query: 454 F 454
F
Sbjct: 284 F 284
>gi|421859666|ref|ZP_16291870.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410830764|dbj|GAC42307.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 297
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 138/288 (47%), Gaps = 19/288 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ T VF +I P+ HS P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSTSPLMHNAALRELGLNAVYTAFHVASEQLEQAVQGMRALGMC 75
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAVM DEV A I AVNTI+ R G+LIGYNTD + ++++ I
Sbjct: 76 GMNVTIPHKEAVMAHLDEVDESASVIGAVNTIVNR--SGRLIGYNTDGLGFVRSLQEEI- 132
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
F + R+ ++ G A K+ R+ I + ERA+ LA D+
Sbjct: 133 ----------FSNLHQSRILLIGAGGAARGIAYALLKAGCRRLQIANRTLERAEVLARDL 182
Query: 347 MGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
L +P A I+ + T +GMHP+ + VP + LR +V D VY P
Sbjct: 183 SAFGTVAAVQLGTRPTIDAHEVDIVIHTTSVGMHPDGEAVPFDPDWLRPDMIVSDIVYNP 242
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
KT LL++A G SG+ MF+ Q L+TG AP MRE V
Sbjct: 243 LKTALLREAGKRGCRTHSGLGMFVYQGAIALELWTGAAAPVPLMREQV 290
>gi|373859117|ref|ZP_09601849.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372451208|gb|EHP24687.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 279
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 27/286 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FG+I P+ HS PI+ N F++ + + Y P V ++L S +GF++
Sbjct: 3 KLFGVIGDPIAHSMSPIMQNDLFQNYSMDAHYFPFHVKKEELVDAIKGLKSLGVSGFNIT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A++ D++ PLA AI AVNT++ DGKL G+NTD GY
Sbjct: 63 VPHKVAIIPLLDQIDPLASAIGAVNTVVN--IDGKLTGFNTDG-------------NGYV 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G + L + ++ GAGGA RAL F G + + DI R K A ++
Sbjct: 108 RGLTEQITNLQDKSVLMIGAGGAARALYFSLAKAGVKRL--DI-CNRTKVKAYTLIEECP 164
Query: 352 PFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
D ++ ++ ++ T +GM P+T+ +P+S E L+ V D +Y P +
Sbjct: 165 YHVDSTAYEMKEAEERLGEYDVIIQTTSIGMSPHTEDIPLSLEHLKAGTFVSDIIYNPLE 224
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
T LL++A+ GAII +G++MF+ Q F ++TG + M+ IV
Sbjct: 225 TALLREAKQKGAIIQNGLDMFVFQGALAFEIWTGIFPDTDRMKNIV 270
>gi|452992543|emb|CCQ95970.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 288
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 30/274 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
IN + V+ LI P+ S PI++N ++ + N IY+ V DL + + +
Sbjct: 3 INFNKDVYCLIGNPIAKSLSPIINNSYYKIIGKNNIYLAFNVKEKDLADVINVFKILNIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K ++M+ D + A+ + AVNT+ + +G+LIGYNTD + ++E ++
Sbjct: 63 GFNVTLPHKISIMEHLDSISDEAKILGAVNTV--KNKNGRLIGYNTDGMGFLKSLE--LE 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
+ G K+ T ++ GAGGA A++ G + ++I + +AK LA
Sbjct: 119 DVGVKDKTV-----------LVLGAGGAANAISISLAKEGVKKIIISNRTLSKAKILAEK 167
Query: 346 VMGAARPFEDIL---------NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
+ +R F + N + EK I+ N T +GMHPN D P++ + +++
Sbjct: 168 I---SRKFPKVTSEYDSLKLKNVRKEKIDIIVNCTSVGMHPNIDESPINLHGFSENLIIY 224
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 430
D +Y PR+T+L++ AE G ++G+ M + QA+
Sbjct: 225 DIIYKPRRTKLMELAEKKGYYTINGLSMLINQAL 258
>gi|386399042|ref|ZP_10083820.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385739668|gb|EIG59864.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 292
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 140/284 (49%), Gaps = 34/284 (11%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEGLGLRGHYQLIEVAGADTAGLRLMLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
FPYKEAV+ DE+ P A A+ AVNT++ R +G+L G+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPGAAAMGAVNTVVVR--NGRLTGHNTDTT-------------GFA 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--G 348
A +P +G + G GG G+A+AF S + IFD + RA+ LA+ ++ G
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLDVTDIRIFDSEPARAEKLAALLVKQG 178
Query: 349 AAR---PFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
AR ED L+ GA L N TP+GM PN + PVS LR V DAVY+P
Sbjct: 179 GARVAASVEDALD-----GATGLVNGTPVGMLPNRE-TPVSPTLLRQNLWVADAVYSPLI 232
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
T LL A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|354568130|ref|ZP_08987296.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
gi|353541095|gb|EHC10565.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
Length = 287
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 32/295 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I P+ HS P++HN + + +Y+P + +DL +++
Sbjct: 2 ITGKTKLLGVIGYPIEHSLSPVMHNAAIAQLGIDYVYLPFPIKPEDLHTAIQGFAAIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A+++ V P+AQA+ AVNT+I++ + IG NTD E + ++ +
Sbjct: 62 GFSVTIPHKQAILRSLSAVEPIAQAVGAVNTVIKK--NNSWIGTNTDIEGFLAPLQAHQQ 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
K + V+ G GGA RA+ G G A + + + +R + +
Sbjct: 120 NWSQK-------------IAVILGNGGAARAVVAGCAKLGCAEIHVVGRNVQRLRDFSQS 166
Query: 346 VMGAARPFEDILNFQ-----PE---KGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 394
+ P + LN PE + +L N TP+GM+P D P+S L +
Sbjct: 167 WENS--PLQVNLNVHRWDELPELIPQADLLVNTTPIGMYPKIDESPLSAAEMANLSSQAI 224
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+D +YTP T+ L+ A+ G + G+EM ++Q ++ +E+ P + MR+
Sbjct: 225 AYDLIYTPNPTKFLQQAQQIGVTAIDGLEMLVQQGAAALKIWLQRESVPVDVMRQ 279
>gi|291548176|emb|CBL21284.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 288
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 33/298 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 225
+I T + GL+ PV HS P++HN FR++ + +Y+ V + L + +
Sbjct: 3 NITGHTGLTGLLGSPVAHSVSPLMHNEAFRYLGLDYVYLCFDVTEETLPQAVEGLKACGI 62
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF++ P K +++ DE+ P AQ I AVNT+ R +GKL G+NTD + DA
Sbjct: 63 KGFNLTMPNKNKIVELLDELSPTAQLIGAVNTV--RNDNGKLKGFNTDGYGFTQSARDA- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF----DIDFERAK 340
G + GR + G GGAG A+ + GA+ + +F +ERA
Sbjct: 120 ------------GCDVKGRTITVMGVGGAGMAICGQSALEGAKKIHVFARPTSRYWERAA 167
Query: 341 SLASDVMGAARPFEDILNFQP---------EKGAILANATPLGMHPNTDRVPVSEETLRD 391
++A + M E IL+ E+ +L NAT +GM P+ +S++ L
Sbjct: 168 AMA-EKMSHMTECEMILHEMDDHTALKDALEESNLLINATSVGMVPDVTGTVISDKALFH 226
Query: 392 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+L V D VY PR+TRLL++A AG +G+ M L Q + F+++TG + P E +RE
Sbjct: 227 PELTVADVVYEPRETRLLREAREAGCPTFNGMYMLLHQGVKAFHIWTGLDMPVELVRE 284
>gi|255656694|ref|ZP_05402103.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-23m63]
gi|296451777|ref|ZP_06893503.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296880095|ref|ZP_06904063.1| shikimate dehydrogenase [Clostridium difficile NAP07]
gi|296259387|gb|EFH06256.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296428909|gb|EFH14788.1| shikimate dehydrogenase [Clostridium difficile NAP07]
Length = 287
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F ++ + Y+ + VD +K+ S + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFEKLDLDYRYLAFDITVDKVKEALSAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 341
GY + G+ + GAGGA A+ GAR + IF+ ++RA+
Sbjct: 108 -GVGYVRNLKENEVEVKGKKVTIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 342 LASDVMGAA-------RPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
++ ED L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKEVPKCIVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY PRKT++++DAE+ G + G+ M L Q FNL+TG E P + + E+
Sbjct: 227 DLVVTDVVYNPRKTKMIEDAESNGCKAIGGLGMLLYQGAESFNLYTGLEMPVKEVNEL 284
>gi|218437685|ref|YP_002376014.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
gi|226729102|sp|B7KFV3.1|AROE_CYAP7 RecName: Full=Shikimate dehydrogenase
gi|218170413|gb|ACK69146.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
Length = 288
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 29/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+N N IYVP V +DL+ + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+ ++ + AQ + AVNT+ R ++ G NTD
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWR--TETGWSGTNTDV------------ 109
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF------DIDFERAK 340
G+ P + V+ G GGA RA+ G G R + +D
Sbjct: 110 -HGFLAPLKRLNLPWSQVSPVILGNGGAARAVVVGCYEMGCRQISVVGRTKEKLDHFYQS 168
Query: 341 SLASDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 395
+ + A R + ED+ K +L N TPLGM P+ D+ PV ++ Q +
Sbjct: 169 WQNTPIQEALRVYLWEDLPQLV-SKTQLLINTTPLGMSPHIDQSPVDLTVMKKLQPGAIA 227
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+D +YTP T LK+A+ GAII+ G+EM +Q +++ + P E M +
Sbjct: 228 YDLIYTPNPTLFLKEAQQQGAIIIDGLEMLAQQGALALSIWIKQSVPVEIMSQ 280
>gi|407978440|ref|ZP_11159271.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
gi|407414998|gb|EKF36614.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
Length = 280
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 232
++GLI PVGHS P +HN + +G Y V+ DL S + +GF+V
Sbjct: 4 LYGLIGYPVGHSMSPDIHNAALKDAGIDGHYHGFQVEEHDLADAVSGMKALGISGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMQYLDKIDVTAERLRAVNTV--RLEKGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 349
PL+ F++ GAGGA RA+ + FDI E+A+SL G
Sbjct: 117 -------PLSELSFLMIGAGGAARAIYMTMAEYAPKS--FDITNRTIEKAESLIESAEGK 167
Query: 350 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
LN E+ ++ + T +GM+PN + P+S + +V D VY P +T+
Sbjct: 168 ITSSAIPLNQAEERLGNYDVIIHTTSIGMYPNVEETPISLTKAKKTAVVCDIVYNPIETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL +A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLSEAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIEKL 275
>gi|194017689|ref|ZP_03056299.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194010589|gb|EDW20161.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 280
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I PVGHS P +HN + +G Y V DDLK S + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEGGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 349
PL+ F++ GAGGA A+ + FDI E+A++L G
Sbjct: 117 -------PLSELSFLMIGAGGAANAIYTTIADYAPKS--FDITNRTIEKAEALIESANGN 167
Query: 350 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
L E+ ++ + T +GMHPN + P+S + +V D VY P +T+
Sbjct: 168 FTSSAITLKTAEEQLGEYDVIIHTTSIGMHPNVEETPISLVNAKKTAVVCDIVYNPIETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL++A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIQKL 275
>gi|434403542|ref|YP_007146427.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
gi|428257797|gb|AFZ23747.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
Length = 294
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 146/294 (49%), Gaps = 29/294 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + +Y+P+ + +L+ + +++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPVMHNVALGEMGLDYVYLPLPIAPQNLEIAIAGFAAIGVV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ DGK +G NTD E I ++
Sbjct: 67 GFSVTIPHKQAILPLLSEITPVAQAIGAVNTVTRQ--DGKWVGTNTDVEGFIAPLQTTYH 124
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ + ++ V+ G GGA R++ G G A + + + ++ +
Sbjct: 125 QDWRQ------------KVAVILGNGGAARSVVAGCIQLGFASIHVVGRNVQKLEEFRHS 172
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 395
+ +E++ P+ +L N TP+GM+P + P+S E + D +
Sbjct: 173 WGNSPLKEKFQVHQWEELPQLIPQ-ADLLVNTTPVGMYPQVEASPLSVEEMADLPADAIA 231
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMRE 448
+D +Y P+ T L+ AE GAI + G+EM ++Q ++ + P + MR+
Sbjct: 232 YDLIYIPKPTLFLQQAEKQGAIAIDGLEMLVQQGAAALKIWLQRPIVPVDAMRQ 285
>gi|390455054|ref|ZP_10240582.1| shikimate dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 296
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 33/303 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGLRALNI 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 341
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAEE 170
Query: 342 ---LASDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 389
+ ++ M A+ P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHAQVKANIYPLEDQEQLRKEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKEQ 290
Query: 450 VLA 452
+ A
Sbjct: 291 LFA 293
>gi|90962767|ref|YP_536682.1| shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|301300360|ref|ZP_07206564.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821961|gb|ABE00599.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|300852044|gb|EFK79724.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 291
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
G+ A G + G+ LAGAGGAG +A A G + + IF++D +E+A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWEQA 165
Query: 340 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 390
+ + +D ED +F+ E + I +AT +GM P + V + +
Sbjct: 166 EKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLENMTLVEDPSWFH 225
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 450 VLAK 453
+ ++
Sbjct: 286 LFSE 289
>gi|383762257|ref|YP_005441239.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381382525|dbj|BAL99341.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 464
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSP 223
I+A T + GLI PV HS P +HN F + + YVP+ V+ + +
Sbjct: 9 ISAKTTLVGLIGWPVSHSVSPAMHNAAFAALGMDWRYVPLPVNPALPGAVGDAVRGMRAM 68
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
G +V P+K+AV+ F D + P AQA+ AVNT+I +DG L G NTD I +
Sbjct: 69 GMRGINVTVPHKQAVLPFLDHIAPAAQAMRAVNTVIVE-ADGSLTGDNTDAPGFIADLR- 126
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSL 342
S G AG ++ GAGG+ RA+ +G G R+ + + ERA L
Sbjct: 127 ------------SHGVDPAGEHALVLGAGGSARAVVYGLAQAGVQRITVANRRIERAHQL 174
Query: 343 ASD-------VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 394
D + AA D L + ++ N T LGM P+ + P E LR Q
Sbjct: 175 LEDLRPYLGAIPCAAVALPDGL-VEVADAPLIVNCTSLGMTPHVETTPWPRELPLRPGQT 233
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
V+D VY P T LL+ A GA + G+ M + Q F +TG+ AP E MR
Sbjct: 234 VYDLVYNPPDTLLLQQARQQGARAIGGLGMLIWQGALAFERWTGRPAPVEVMR 286
>gi|336476220|ref|YP_004615361.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
gi|335929601|gb|AEH60142.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
Length = 272
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
KVF + PV HS P++HN + +NG+Y V DL+ + F G ++
Sbjct: 2 KVFAVFGDPVKHSLSPMMHNAAMLELGFNGVYHAFQVKSSDLRDAIYGAKAMGFGGVNLT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++F PLA I AVNTI R + GYNTD ++ + D+
Sbjct: 62 VPHKEKALEFI-RPDPLAAKIGAVNTIDFREG---ITGYNTDGIGALRTLLDS------- 110
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G + ++ GAGGA RA++F S GA + I + ERA LA +V R
Sbjct: 111 ------GIDIRNASVLIVGAGGAARAISFQLASEGAHITIANRTQERALKLAEEVNEVGR 164
Query: 352 P----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
ED+ N E IL N T +GM+P D + + + VFD VY P +T+L
Sbjct: 165 AKGAGLEDLKNLIKE-ADILINTTTVGMYPAVDDTIATADMMHPDLTVFDIVYNPLETKL 223
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LK+A+ AG+ ++GV M + Q F ++T P M++ VL
Sbjct: 224 LKEAKKAGSNAINGVMMLVYQGAEAFEIWTDIRPPVNIMKQAVL 267
>gi|428316838|ref|YP_007114720.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
gi|428240518|gb|AFZ06304.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
Length = 348
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 37/321 (11%)
Query: 163 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTY 220
+ + + I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +
Sbjct: 21 SQRTKMIKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGF 80
Query: 221 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 280
++ GFS+ P+K+A++ EV P+A++I AVNT+ +D G NTD E +
Sbjct: 81 AAIGVRGFSITIPHKQAILPLLSEVSPIARSIGAVNTVYM--TDRGWCGTNTDVEGFLAP 138
Query: 281 IE------------DAIK--ERGYKN-------GTASFGSPLAGRMFVLAGAGGAGRALA 319
++ DAI ERG A GS + ++ V+ G GGA RA+
Sbjct: 139 LQTPPTPPYQGGAKDAISALERGNTAVESCPPPSGARGGSDWSQKVAVILGNGGAARAVV 198
Query: 320 FGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDI-------LNFQPEKGAILANAT 371
G G A + + + + + + P +++ L+ + +L N T
Sbjct: 199 AGCAQLGCAEIHVVGRNEQNLGEFQQSWVNSPMPVQNLQVHTWDNLSRLISQADLLVNTT 258
Query: 372 PLGMHPNTDRVPVSE---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQ 428
P+GM+P ++ PV+ + + +V+D +YTP T+ LKDA+ GA + G+EM ++Q
Sbjct: 259 PVGMYPQGEKSPVAAGEIDRIPAGAIVYDLIYTPNPTQFLKDAQLRGARAIDGLEMLVQQ 318
Query: 429 AIGQFNLFTGKEA-PKEFMRE 448
++ KE+ P + MR+
Sbjct: 319 GAAALKIWLNKESVPVDVMRQ 339
>gi|145577923|gb|ABP82680.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSSECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|21674623|ref|NP_662688.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
gi|34222587|sp|Q8KBH8.1|AROE_CHLTE RecName: Full=Shikimate dehydrogenase
gi|21647824|gb|AAM73030.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
Length = 295
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 48/304 (15%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV------PMFVDDLKKFFSTYSSPDFAG 227
K+FGLI K V +S P++HN F + +Y P + D K AG
Sbjct: 8 KIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALG---IAG 64
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
FSV PYK+ V+ F DE+ P A +I AVNTI+ +G+L+GYNTD +
Sbjct: 65 FSVTIPYKKTVVPFLDELSPEALSIGAVNTIVN--DNGRLLGYNTDID------------ 110
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASD 345
G+ + R + G GGA A AF + + V++ D ++A+ + +
Sbjct: 111 -GFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAEDMLEE 169
Query: 346 VMGAARPFEDILNF-------QP------EKGAILANATPLGMHPNTDRV----PVSEET 388
+ D++ QP +L NATP+G D + P
Sbjct: 170 YA-----YRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGL 224
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L D Q+V+D VY P +T LL +A AAGA +++G+EM + QA F+++TG+E P + +R+
Sbjct: 225 LHDGQIVYDMVYNPPETPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRK 284
Query: 449 IVLA 452
VLA
Sbjct: 285 TVLA 288
>gi|57234701|ref|YP_181209.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
gi|123618900|sp|Q3Z990.1|AROE_DEHE1 RecName: Full=Shikimate dehydrogenase
gi|57225149|gb|AAW40206.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 286
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 29/290 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FGLI PV HS P + N F+H + +Y+ + ++L+ ++ + G +V
Sbjct: 8 LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDSLDPAAEKIGAVNTIVN--ENGRLKGYNTDFGGFVRLLE--------HN 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A + F L GAGG+ A+A + G + + E+AK LA + G
Sbjct: 118 RIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCLRLSG 172
Query: 349 AARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ E LN + A ++ N TP+GM + V LR V DA+Y P
Sbjct: 173 KTQGLE--LNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNPC 230
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
KTRLL+DAE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 231 KTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMKEAELA 280
>gi|308067676|ref|YP_003869281.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305856955|gb|ADM68743.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 296
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 33/303 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGMRALNI 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G++V P K ++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIGLKGKKMTLVGSGGAATPIAIEAAQAGLAEISIFARNDQFFARAEE 170
Query: 342 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 389
+ V P E+ + E ILAN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLENQEQLREEIRTSHILANGTGVGMKPLEGKSVIEDVSML 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKEQ 290
Query: 450 VLA 452
+ A
Sbjct: 291 LFA 293
>gi|149183163|ref|ZP_01861612.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
gi|148849146|gb|EDL63347.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
Length = 277
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 30/287 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I P+GHS P++HN F+ + Y P V +D++K GF+V
Sbjct: 4 LYGVIGNPIGHSMSPLMHNDAFQEKGIDSHYQPFLVKSEDIEKAVKALKVLGVQGFNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K A+M DEV PLA+AI AVNT++R+ + IG+NTD I ++E+
Sbjct: 64 PHKRAIMPLLDEVDPLAEAIGAVNTVVRKGD--RFIGFNTDGMGFIRSLEE--------- 112
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAAR 351
S PL + ++ GAGGA RA+ + + G + + I + E+ + + D
Sbjct: 113 ---SCPFPLDNKAVLIIGAGGAARAIFYSMAASGIKNIDICNRTPEKGEDIIKDC----- 164
Query: 352 PF---EDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
PF L+ Q + + I+ T +GMHP T+ +P++ +++ + D +Y P
Sbjct: 165 PFPCTSASLSLQQAEQSMELYDIIVQTTSVGMHPETNAMPLNVTRIKEGAFISDIIYNPL 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+T+++K A G +G+ MF+ Q F L+TG + MR IV
Sbjct: 225 ETKIMKTFCALGGKGDNGIGMFVHQGALAFELWTGIIPDSDRMRNIV 271
>gi|333896985|ref|YP_004470859.1| shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112250|gb|AEF17187.1| Shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 154/288 (53%), Gaps = 26/288 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
+IN+ T ++G+I P+GHS P++HN F ++++N +YV V+ DLK +
Sbjct: 2 NINSKTSIYGIIGHPIGHSLSPLIHNYAFENLDFNSVYVSFDVNEEDLKDAIIGIKALGI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+KE+V+K+ D + A+ I AVNTI + + G L GYNTD +T +++
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--KNNSGSLEGYNTD----VTGFMESL 115
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 344
KE + G+ V+ GAGGA +A+A G GA+ + + + ++AK L+
Sbjct: 116 KEHNV---------DVVGKNAVILGAGGAAKAVAVGLALLGAKSIYVCNRSIDKAKELSI 166
Query: 345 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
++ + D LN E IL NAT +GMHPN D P+ E+ + + V+D
Sbjct: 167 HMENNFNIKSLGISYND-LNMLDEID-ILINATSVGMHPNVDVSPIGEDVVAKAKFVYDI 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+Y P KT L AE ++G++M + QAI F ++TG K+ +
Sbjct: 225 IYNPEKTLFLSYAEKYRIKYINGLDMLINQAIDSFKIWTGANFDKKII 272
>gi|435853263|ref|YP_007314582.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
gi|433669674|gb|AGB40489.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
Length = 286
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 155/288 (53%), Gaps = 26/288 (9%)
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFS 229
+ ++ GL PV HS P +HN F+ + N Y+P V D+LK+ + + G +
Sbjct: 2 NKQLTGLFGYPVEHSLSPAMHNAAFKELGLNSTYLPFAVKPDNLKEAVRGIKALNIKGVN 61
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
+ P+K+ V+ + D++ A+ I AVNTI +GKLIG+NTD I A+++
Sbjct: 62 LTIPHKQKVISYLDQLSNEAKLIGAVNTI--ENQEGKLIGHNTDGRGYIRALQEE----- 114
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDV-- 346
A F +G+ ++ GAGGA RA+AF G + I + E+AK L D+
Sbjct: 115 -----AKFNP--SGKKVLVIGAGGAARAVAFQLSLEGINELYIANRTIEKAKGLVKDIKT 167
Query: 347 ---MGAARPF---EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDAV 399
+ +P ++ L +K ++ + TP+GMHP TD PV S + L LV D V
Sbjct: 168 KVSLNQVQPLPLSDNKLADIIKKLDLIIDTTPVGMHPQTDVEPVISAKLLHSNLLVSDLV 227
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
Y P++T LL++A+ GA +SG+ M L Q + F ++TGK+APK+ MR
Sbjct: 228 YNPQETVLLQEAKKVGAETLSGLGMLLYQGVIAFEIWTGKKAPKKVMR 275
>gi|435850486|ref|YP_007312072.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
gi|433661116|gb|AGB48542.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
Length = 273
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+F + P+ HS P++HN F+ + Y V + LK + F G ++
Sbjct: 3 KIFAVFGDPIEHSLSPVMHNAAFKAKGMDCTYHAFRVSREKLKDAIKGAHAMGFGGLNLT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P KE +K E LA + AVNT+ + DG + GYNTD + A+ DA
Sbjct: 63 VPLKEEALKIV-EPDLLAAVMGAVNTVDLK--DG-IRGYNTDGIGAERALVDA------- 111
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA- 350
G + G ++ GAGGA R ++F S GA V I + ERA LA DV A
Sbjct: 112 ------GVKIEGAKVLIVGAGGAARGISFQLASDGADVTIANRTPERAMRLAEDVAVAGN 165
Query: 351 ------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+D++ +L N T LGMHP + + E + +VFD VY P K
Sbjct: 166 VKGCGLEQLDDLI----ASADVLINCTTLGMHPQVETTIATAEQMHAGLVVFDIVYNPLK 221
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T+LL +AE AG+ VSGV M + Q F ++TG E P E M+E V+
Sbjct: 222 TKLLMEAEKAGSKTVSGVMMLVYQGAEAFRIWTGVEPPVEVMKEAVMGAL 271
>gi|145577913|gb|ABP82675.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
seoulensis]
Length = 237
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 21/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILNF 359
+L GAGGA RA+ F G + + + + ++AK L A+DV A E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEE 166
Query: 360 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 QGNYDIIIQTTTR-GMHPHVEHTPLQTCSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQ 225
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 NGIDMFVYQ 234
>gi|254412118|ref|ZP_05025893.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
gi|196181084|gb|EDX76073.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
Length = 288
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 146/303 (48%), Gaps = 31/303 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
++ I TK+ G+I PV HS PI+HN + + +Y+P+ V +DL + +++
Sbjct: 1 MQQITGTTKLLGVIGHPVEHSLSPIMHNRAIAQLGVDYVYLPLPVKPEDLDVAVAGFAAI 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
GF++ P+K+A++ EV +AQ + AVNT+ R +D G NTD I +
Sbjct: 61 GLQGFNITIPHKQAIIPLLAEVSDIAQLVGAVNTVWR--TDKGWSGTNTDVLGFIAPLNQ 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV---------IFDI 334
+R + + A V+ G GGA RA+ G G + +
Sbjct: 119 --YQRDWHHTKA-----------VVLGYGGAARAVVVGCMQLGCPEIWVVGRNPYKLSQF 165
Query: 335 DFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-- 392
A + S ++ A P+E++ ++ +L N TP+GM P+ + P+ EE ++
Sbjct: 166 QQSWANTPLSKIL-QAYPWEEMPQLL-QQADLLVNTTPVGMSPHVNESPIDEEIIQRLPK 223
Query: 393 -QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+ +D +YTP T+ L+ A+ GA + G+EM ++Q ++ G+ P E MRE +
Sbjct: 224 GAIAYDLIYTPNPTKFLQQAKQQGANPIDGLEMLVQQGAAALQIWLGQTPPVEIMRESLQ 283
Query: 452 AKF 454
K
Sbjct: 284 QKL 286
>gi|167747177|ref|ZP_02419304.1| hypothetical protein ANACAC_01891 [Anaerostipes caccae DSM 14662]
gi|317473620|ref|ZP_07932909.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|167654137|gb|EDR98266.1| shikimate dehydrogenase [Anaerostipes caccae DSM 14662]
gi|316898910|gb|EFV20935.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 289
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 143/298 (47%), Gaps = 33/298 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I T++ GLI PVGHS P +HN F+ + + Y+ + D +K S + +
Sbjct: 4 RIKGTTRLLGLIGSPVGHSGSPAMHNYGFQALGIDAAYLAFDIKEDQVKDAISAVRTLNM 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K K+ DE+ P A+ I AVNT++ R DGKL G+ TD E + ++D
Sbjct: 64 QGLNVTMPCKTEAAKYMDELSPAARLIGAVNTVVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKS 341
G + + V+ GAGGA A+ GA V D F RA+
Sbjct: 120 -----------HGVSIGKKDIVIFGAGGAATAILVQCALDGANSVTVINPRDDFFGRAEE 168
Query: 342 LASDVMGAARPFEDI--LNFQPE--------KGAILANATPLGMHPNTDRVPVSEETL-R 390
+ + P DI ++ E K IL N T LGM P D + + +L R
Sbjct: 169 MHKKLR-EETPDCDITLIDLADEAAVKEAVSKTDILINGTLLGMKPKEDTSVIRDTSLFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V D VY P++T+LL++A+AAG V G M L Q + F LFTG++ P + ++E
Sbjct: 228 KDMVVADVVYNPKETKLLREAKAAGCRTVQGDGMLLWQGVAAFKLFTGQDMPVKEVKE 285
>gi|150402110|ref|YP_001329404.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
gi|166219473|sp|A6VFM7.1|AROE_METM7 RecName: Full=Shikimate dehydrogenase
gi|150033140|gb|ABR65253.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
Length = 280
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 33/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ TK+ GLI PV HS PI+HN + N +Y+ V ++LK S +
Sbjct: 2 MDTKTKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQIT 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + +E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGAKRTLEEK-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA--- 343
L + ++ G+GGA RA+ F ++ + I + + E+AK L+
Sbjct: 118 -----------AGILIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEF 165
Query: 344 SDVMGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 396
S + +P DI NF I+ N TP+GMHPNT+ PV + ++ +V
Sbjct: 166 SKKLKKQKPINYGDLDLDIKNFD-----IILNTTPVGMHPNTNVDPVIPLKNIKKDAVVM 220
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P + LK+A GA ++G+ M + Q F ++TG + M++ + +K
Sbjct: 221 DLIYNPIEPVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWTGMKPDIYVMKKAINSKI 278
>gi|428226598|ref|YP_007110695.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
gi|427986499|gb|AFY67643.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
Length = 287
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ G++ PV HS PI+HN H+ + +Y+P+ V D+L K + +
Sbjct: 2 ITGSTRLLGVMGHPVEHSLSPIMHNAAIAHLGADFVYIPLPVAPDNLPKAIAGLEALGVR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A+M EV LAQAI AVNT+ P G NTD + +E
Sbjct: 62 GFNLTIPHKQAIMPMLAEVSDLAQAIGAVNTVWWTPQGWS--GTNTDVAGFLAPLE--AL 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID----FERA 339
R +++ TA V+ G GGA RA+ G G + VV D F+++
Sbjct: 118 GRDWRSTTA-----------VVLGNGGAARAVVAGCGQLGCQTTYVVGRSADKLAQFQQS 166
Query: 340 ---KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDYQ 393
LA ++ RP+E + + E I+ N TP+GM P+ D P+ +R
Sbjct: 167 WQGSPLAGNLQ--VRPWEQLADCLAEADLIV-NTTPIGMTPHPDASPLDAALAAQIRPRA 223
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ +D +YTP T+ L+ AEA GAI + G+EM + Q ++ + P MR+
Sbjct: 224 IAYDLIYTPSPTQFLQQAEAQGAIAIDGLEMLICQGAAGLEIWLEQPVPVAVMRQ 278
>gi|268324616|emb|CBH38204.1| probable shikimate 5-dehydrogenase [uncultured archaeon]
Length = 272
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 143/287 (49%), Gaps = 25/287 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+ HS P++HN F+ + + +Y+ V ++L S +G +V
Sbjct: 3 KIYGIIGDPIAHSLSPVMHNAAFKKLGLDAVYLAFRVTLEELGDAIRGAKSLGISGLNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
P KE + F +A+ I A+NTI PS GYNTD ++ +E+ + E
Sbjct: 63 IPLKEKALSFV-ATEEVAKKIGALNTIDFSSTPS-----GYNTDGIGALMVLEETVGE-- 114
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
+ G+ ++ GAGGA RA++F + GA V + + R+ LAS++ A
Sbjct: 115 -----------IRGKNVLILGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNA 163
Query: 350 -ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
+ L Q IL NAT +GMHP D ++ + + +VFD VY P +T+LL
Sbjct: 164 NSISLGAELKNQIGDSDILINATSVGMHPKEDATLITADLMHPDLVVFDIVYNPIETKLL 223
Query: 409 KDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
K+A+ AG IV GV+M + Q F L+T ++ P E M V A
Sbjct: 224 KEAKRAGVKKIVDGVKMLVYQGAASFKLWTKEDPPVEVMENAVKAAL 270
>gi|421490826|ref|ZP_15938193.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
gi|400371823|gb|EJP24772.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
Length = 284
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENTCRYNMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD--IDFERAKSLA 343
+G+ SF + G+ V+ GAGGA A+ A G + +F FER
Sbjct: 109 -KGFFMSLPSF--VVKGKKMVMLGAGGAATAIIVQAALDGVDEIFVFTRHSSFERVSQKM 165
Query: 344 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
++ AA+ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTAAKIWVLPLENKELLQEKINISALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A+ +V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKEMPTKEIWQTLEKKY 283
>gi|374578521|ref|ZP_09651617.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374426842|gb|EHR06375.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 292
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-----DLKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + G Y + V +L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEGLGLRGHYQLIEVAGAGSAELAMMLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
FPYKEAV+ DE+ P A A+ AVNT++ R +G+LIG+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPGAAAMGAVNTVVVR--NGRLIGHNTDTT-------------GFA 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--G 348
A +P +G + G GG G+A+AF S + IFD + RA+ LA+ ++ G
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLDVTDIRIFDSEPARAEKLAALLVKQG 178
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
AR + + L N TP+GM PN + P++ LR V DAVY+P T LL
Sbjct: 179 GARVAASV-EAALDGATGLVNGTPVGMLPNRE-TPIAPTLLRQSLWVADAVYSPLITPLL 236
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 237 AAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|284161990|ref|YP_003400613.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
gi|284011987|gb|ADB57940.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
Length = 271
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 27/282 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
FG+I P+GHS PI+HN FR +N + IY+P V ++LK + F G +V P
Sbjct: 4 FGVIGHPIGHSASPIMHNTVFRTLNIDAIYLPFDVKPENLKDAVYGARALGFKGLNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE + K+ V LA+ I AVNT+ KL GYNTD ++ +E
Sbjct: 64 HKEEITKYVKPVG-LAERIGAVNTV----DVPKLEGYNTDAIGALRTLE----------- 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR-- 351
++ G++ ++ GAGG RA+AF + + ++I + R LA DV
Sbjct: 108 --AYNVDYEGKVVLIVGAGGVARAIAFALAGK-STLIITNRTASRGLKLAEDVRKYGECI 164
Query: 352 --PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
P+E + + K IL N TPLGM +++PV E + + +VFD VY P +T L+K
Sbjct: 165 FYPYERVEELK-GKFDILINCTPLGMKGFEEKLPVPESLIENV-VVFDTVYNPIETPLIK 222
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
A+ G ++ G++M + Q F ++ G + P MR+ V+
Sbjct: 223 LAKKRGCKVIYGLDMLVYQGAEAFKIWFGFDPPILVMRDAVV 264
>gi|227891979|ref|ZP_04009784.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
gi|227866183|gb|EEJ73604.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
Length = 291
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 31/304 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 339
G+ A G + G+ LAGAGGAG +A A G + + IF++D + +A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWAQA 165
Query: 340 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 390
+ + +D ED +F+ E + I +AT +GM P D V + +
Sbjct: 166 EKNVEIINRETDCKATLHYLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPSWFH 225
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 450 VLAK 453
+ ++
Sbjct: 286 LFSE 289
>gi|336114442|ref|YP_004569209.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
gi|335367872|gb|AEH53823.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
Length = 280
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 30/287 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGLDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K+A+M + D++ PLA+ I AVNT+IR P +GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDDIDPLAETIGAVNTVIRTPHG--WVGYNTDGPGFMQALKE--------- 112
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------A 343
G L+G ++ GAGGA RA+ + GA V + + ++A+ +
Sbjct: 113 ---ESGRVLSGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCP 169
Query: 344 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
S V+ E + N+ ++ T +GMHP+TD P+S L+ V D +Y P
Sbjct: 170 SKVLTLKEAEEQLGNY-----TLIVQTTSIGMHPDTDAQPLSLRHLKPGAFVSDIIYNPF 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+T+ LK+A+ GA + +G+ MF+ Q F +TG + M++IV
Sbjct: 225 ETKFLKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTGKMKKIV 271
>gi|257887461|ref|ZP_05667114.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|293377413|ref|ZP_06623615.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|293570466|ref|ZP_06681521.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|424763558|ref|ZP_18191028.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430841215|ref|ZP_19459134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|431035007|ref|ZP_19491884.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|431737780|ref|ZP_19526732.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|431751761|ref|ZP_19540448.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|431756603|ref|ZP_19545235.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|431761855|ref|ZP_19550417.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
gi|257823515|gb|EEV50447.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|291609412|gb|EFF38679.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|292643931|gb|EFF62039.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|402422669|gb|EJV54899.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430493991|gb|ELA70241.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|430563722|gb|ELB02931.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|430598386|gb|ELB36127.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|430615055|gb|ELB52025.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|430620457|gb|ELB57259.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|430624547|gb|ELB61197.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
Length = 284
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM D+ P+ + + +L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|300867823|ref|ZP_07112465.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300334154|emb|CBN57639.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 292
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G+I P+ HS P++HN H+ + +Y+ P+ +DL S +++
Sbjct: 2 IKGTTKLLGVIGHPIEHSLSPVMHNAALSHLGLDIVYLAFPVKPEDLNVAISGFAAVGLL 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFS+ P+K+ ++ EV P+A A+ AVNT+ R + G NTD + +
Sbjct: 62 GFSITIPHKQGILPLLSEVSPVAIAVGAVNTVYRTANGWG--GTNTDVRGFLAPLRSLSL 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD------IDFERA 339
+ G K + ++ V+ G+GGA RA+ G G A + + +F+++
Sbjct: 120 KTGTKQDWSQ-------KVAVILGSGGAARAVVAGCAELGCAEIHVVGRSEQKLTEFQQS 172
Query: 340 ---KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQ 393
LA +++ +E+ L K +L NATP+GM+P D PV+ E L +
Sbjct: 173 WVNSPLAVNLL--THTWEE-LPMLISKADLLVNATPIGMYPRGDESPVALSAIERLSEGA 229
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ +D +YTP T LK A+ GAI + G+EM ++Q ++ + P + MR+
Sbjct: 230 IAYDLIYTPNPTLFLKQAQERGAIAIDGLEMLVQQGAAALEIWLQQPIPVDVMRQ 284
>gi|328950649|ref|YP_004367984.1| shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450973|gb|AEB11874.1| Shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 270
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 141/271 (52%), Gaps = 27/271 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
GLI P+ HS P +H + GIY + D+L+ + G +V P
Sbjct: 3 LGLIGYPLAHSVSPAMHRAALQAAGLEGIYRLLETPPDELESRVMEVRR-GYRGVNVTVP 61
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERGYKN 292
+K AV+ + DEV P QAI AVNTI+ +G+L+G+NTD A+E A + RG +
Sbjct: 62 HKVAVLPYLDEVSPEVQAIGAVNTIVN--EEGRLVGHNTDAPGFTRALEAAGVTARGLRA 119
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-AR 351
V+ GAGGA RA+ + GARV + + F RAK+LA +V GA A
Sbjct: 120 --------------VVLGAGGAARAVVYALVQAGARVRVANRTFARAKALA-EVFGAEAV 164
Query: 352 PFEDILNFQPEKGA-ILANATPLGMH-PNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
PFE + + A +L NAT +G++ P +P E + + V D VY P +TRLL+
Sbjct: 165 PFEGPEFVRAVREADLLVNATSVGLNDPGASPIP---EGVWPREAVVDIVYNPLETRLLR 221
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+A AAG + V G+ M + Q F L+TG++
Sbjct: 222 EARAAGLVAVDGLGMLVWQGALAFELWTGRQ 252
>gi|322517131|ref|ZP_08070015.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
gi|322124281|gb|EFX95792.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
Length = 285
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 31/290 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQINGVYVAWEIPESDLAETVKNIRRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP R+ +L GAGGA +A+ A GA+ V + F++AK
Sbjct: 119 -------------SPKDARLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSFDKAKKS 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ D+ F+ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQTTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGASSPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|145577947|gb|ABP82692.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
ostriniae]
Length = 238
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L GAGGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577951|gb|ABP82694.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tolworthi]
Length = 238
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577941|gb|ABP82689.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
azorensis]
gi|145577953|gb|ABP82695.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
zhaodongensis]
Length = 238
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577959|gb|ABP82698.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
EV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++A++L + M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|145577919|gb|ABP82678.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
wratislaviensis]
gi|145577933|gb|ABP82685.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
shandongiensis]
Length = 237
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 21/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILNF 359
+L GAGGA RA+ F G + + + + ++AK L A+DV A E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEE 166
Query: 360 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 QGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQ 225
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 NGIDMFVYQ 234
>gi|145577907|gb|ABP82672.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
entomocidus]
Length = 238
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|253574706|ref|ZP_04852046.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845752|gb|EES73760.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 301
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+ G+I P+ HSK P++H + G Y+P V + L++ + F G +V
Sbjct: 28 LLGVIGDPIQHSKSPVMHTAALQACGLTGAYLPFHVKGNRLEEAIRGIRALGFRGINVTV 87
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYK 291
P+K VM + D + A+ I AVNTI+ DG L GYNTD I ++ E+A E
Sbjct: 88 PHKVEVMNYLDHIDESARLIGAVNTIVN--DDGVLTGYNTDGIGYIRSLKEEAAPE---- 141
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 350
L G+ ++ G GGA R + + + RV I + E+A+ LA++ G
Sbjct: 142 ---------LKGKRVLVLGCGGAARGIVYALLQEEPGRVTIANRTGEKAQELAAEWSGLG 192
Query: 351 R----PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+++ PE I+ N T +GMHP+ P+ + + +V D +Y P KT
Sbjct: 193 SLTGCGMDELAEVLPEVDLII-NTTSVGMHPHVSDCPLDARLIPEGIVVSDLIYNPLKTE 251
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LL AEA G I SG+ MF+ Q F +TG AP MR VL
Sbjct: 252 LLVQAEAKGCTIHSGLGMFIYQGAYAFERWTGLIAPVGAMRAAVL 296
>gi|333914007|ref|YP_004487739.1| shikimate dehydrogenase [Delftia sp. Cs1-4]
gi|333744207|gb|AEF89384.1| Shikimate dehydrogenase [Delftia sp. Cs1-4]
Length = 279
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 26/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 226
I T + ++ P+ + P +HN +R + + +V + + K++ S + DFA
Sbjct: 5 IAGHTSICVVVGDPIEFTLSPKMHNAAYRTLGIDDKFVFVCCEVNKEYTSKIA--DFARV 62
Query: 227 ----GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
G +V P+ ++++ DEV P+A+ I +VNT++ R + +LIGYNTD ++TA+E
Sbjct: 63 MGVCGLAVANPHNTKIVQYLDEVDPVAELIGSVNTVVNRKN--RLIGYNTDWVGAVTALE 120
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 342
+ L + + GAGGA RA+AFG + RG+ + IF D ++A +L
Sbjct: 121 --------------LITTLDKKKVAILGAGGAARAIAFGLRERGSDISIFARDIKKASAL 166
Query: 343 ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
A V + FE+I I+ NATP+G P + VS L Q+V DAVY P
Sbjct: 167 ARRVGAVSLTFEEIAGVADYD--IIVNATPIGKSPFQNISLVSASCLNSDQVVMDAVYLP 224
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
KTRLL +AE GA IV G+EM L Q QF + T +AP + MR +L F
Sbjct: 225 LKTRLLVEAEKIGAKIVPGMEMLLHQGAAQFEIHTDCKAPLDAMRSSLLNIF 276
>gi|423070585|ref|ZP_17059361.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
gi|355365671|gb|EHG13393.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
Length = 284
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 140/291 (48%), Gaps = 35/291 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 343
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQM 165
Query: 344 SDVMGAARPFEDI--------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-- 393
+ AA + L + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLLLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKNL 222
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
LV D +Y P +T LK A+ V+G+ M L QA F L+TGK+ P +
Sbjct: 223 LVADVIYQPFETPFLKWAKKQNVQAVNGLGMLLYQAAEAFKLWTGKDMPTK 273
>gi|374322326|ref|YP_005075455.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
gi|357201335|gb|AET59232.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
Length = 296
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 33/303 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNV 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIDLTGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 342 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 389
+ V P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY+P K++L++ A++ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAQSVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKEQ 290
Query: 450 VLA 452
+ A
Sbjct: 291 LFA 293
>gi|365894088|ref|ZP_09432248.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
gi|365425153|emb|CCE04790.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
Length = 517
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-----DDLKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V + L+ FAG +V
Sbjct: 242 GLIGAPIKHSASPAMHEEAASALGLRCHYQLIEVAGADRERLRGLLDGVRQMGFAGVNVT 301
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
FPYKEAV++ DE+ P A+AI AVNT++ R +G+L+G+NTD A+ +
Sbjct: 302 FPYKEAVVELLDELAPEAKAIGAVNTVVVR--EGRLVGHNTDTTGFARAVAPLV------ 353
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS---DVM 347
TAS P+A L GAGG G+A+AF S G + + I D D +A +LA+ D
Sbjct: 354 --TASGRGPVA-----LVGAGGVGKAIAFALASHGVSELRIMDSDLVKANALAALLCDHP 406
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
G + D ++ L N TP+GM PN D PV E L V DAVY+P T L
Sbjct: 407 GVS--VADNVDAALRGAVGLVNGTPVGMLPNRDS-PVPETLLHAGLWVADAVYSPLWTPL 463
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
L A+ GA ++SG ++ + QA F LFTG
Sbjct: 464 LSAAKTKGAQVMSGRDLAIYQAADAFQLFTG 494
>gi|78189310|ref|YP_379648.1| quinate/shikimate 5-dehydrogenase [Chlorobium chlorochromatii CaD3]
gi|123579620|sp|Q3AQX0.1|AROE_CHLCH RecName: Full=Shikimate dehydrogenase
gi|78171509|gb|ABB28605.1| shikimate dehydrogenase [Chlorobium chlorochromatii CaD3]
Length = 287
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFR------HVNYNGIYVPMFVDDLKKFFSTYSS 222
+N+ T++F L+ + V +S P++HN F+ H I V D + +
Sbjct: 1 MNSSTRIFALLGRAVDYSYSPLIHNTAFQALGLPYHYTIFNIAEAALVGDALR---GARA 57
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
GFSV PYK+ V+ F DE+ A I AVN I+ + +GKLIGYNTD
Sbjct: 58 LGLGGFSVTIPYKQTVVPFLDELSEEATTIQAVNCIVNK--NGKLIGYNTDI-------- 107
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAK 340
G+ + ++ L G L G+GGA A AF +V++F D ++AK
Sbjct: 108 -----LGFASPLFAYREALHGATIALFGSGGAALAAIEAFQRYFTPKQVLLFARDSQKAK 162
Query: 341 SLASDVMGAAR-------PFEDILNFQPEKGAILANATPLGMHPNTDR---VPVSEETLR 390
S + R P D + + ++ NATPLG D +P+ L
Sbjct: 163 SQLRSSLALERYTNLAIVPLSDYERVRECR--LVINATPLGTKGRADGSAIIPLESNLLH 220
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V+D VY P T LL+ A+A GA + G+EM + QA F L+TG++ P E +R+ V
Sbjct: 221 SEHIVYDMVYNPTITPLLQAAQAVGASTIFGIEMLIGQAEQAFTLWTGEKMPTELVRQTV 280
Query: 451 LAKF 454
+AK
Sbjct: 281 MAKL 284
>gi|257898584|ref|ZP_05678237.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
gi|257836496|gb|EEV61570.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
Length = 284
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM D+ P+ + ++ L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|255525064|ref|ZP_05392009.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
gi|255511217|gb|EET87512.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
Length = 289
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 150/299 (50%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T ++ LI PVGHS P ++N +F+ + + Y+ + ++ + + + +
Sbjct: 3 KRISGTTALYSLIGTPVGHSGSPAMYNYSFQKLGVDSAYLAFDISLEKVPDAIAAMKTLN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V+K+ DE+ P A+ + AVNTI+ ++GKL G TD + ++++
Sbjct: 63 IKGSNVTMPCKSEVVKYMDELSPAARIVGAVNTIVN--NNGKLTGNITDGVGFVRSLKEN 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF----- 336
G + G+ + GAGGA A+ GA+ + IF+I DF
Sbjct: 121 -------------GVDVKGKNITIIGAGGAATAIQVQCALDGAKEISIFNIKDDFYKRAE 167
Query: 337 ERAKSLASDVMGAARPFEDILNFQP--EKGA---ILANATPLGMHPNTDRVPVSEETL-R 390
E + L +V D+ + Q EK A IL NAT +GMHP+ D P+ + + R
Sbjct: 168 ETIEKLKQEVPQCVVELYDLEDRQKLREKIASSNILVNATKVGMHPHEDESPIKDNAVFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P++T+ LKDAEA G V G M L Q F L+TG E P + + E+
Sbjct: 228 KDLVVSDTVYNPKQTKFLKDAEAVGCKTVDGTGMLLWQGAEAFKLYTGLEMPAKEVEEL 286
>gi|145577915|gb|ABP82676.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar sotto]
gi|145577925|gb|ABP82681.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar alesti]
gi|145577955|gb|ABP82696.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
fukuokaensis]
Length = 238
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L GAGGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|310640411|ref|YP_003945169.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|386039559|ref|YP_005958513.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
gi|309245361|gb|ADO54928.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|343095597|emb|CCC83806.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 296
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 33/303 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNI 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLQEHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 342 ---LASDVMGAARPFEDILNFQPEK--------GAILANATPLGMHPNTDRVPVSE-ETL 389
+ ++ M A+ +I + ++ I AN T +GM P + + + L
Sbjct: 171 NVRIINEEMKHAQVKANIYALEDQEKLREEILTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKEQ 290
Query: 450 VLA 452
+ A
Sbjct: 291 LFA 293
>gi|387929812|ref|ZP_10132489.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
gi|387586630|gb|EIJ78954.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
Length = 277
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 31/289 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+ HS P++HN F+ + Y P V DL+ + + +GF+V
Sbjct: 3 KLYGVIGDPISHSMSPVMHNDLFKVYGIDAHYHPFHVKRGDLEAAVQGLKAINCSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M F D++ PLA+AI AVNT++ + G+LIG+NTD RG+
Sbjct: 63 VPHKTEIMNFLDDIDPLAEAIGAVNTVVNK--GGRLIGFNTDG-------------RGFL 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
G + L ++ GAGGA +A+ + G + IDF R A+ ++ A
Sbjct: 108 EGLKRNFAVLDSTRVLIIGAGGAAKAIYYTMAHAGVK----HIDFCNRTAEKAAQLIEAC 163
Query: 351 RPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
PF N P + A ++ T +GM PN + P+S E L V D +Y P
Sbjct: 164 -PFSVQSNIYPREKAENRLSNYNLIIQTTSVGMSPNINASPLSLENLGIGAFVSDIIYNP 222
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+T +L+DA+ GA +G++MF+ Q F +TG E M++IVL
Sbjct: 223 LETVILRDAKRRGAGTQNGLDMFVFQGAFAFEKWTGIFPDIERMKQIVL 271
>gi|145577911|gb|ABP82674.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar kenyae]
Length = 238
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|51893090|ref|YP_075781.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|81692083|sp|Q67N06.1|AROE_SYMTH RecName: Full=Shikimate dehydrogenase
gi|51856779|dbj|BAD40937.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 294
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 31/295 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 229
++ G++ PV HS P +HN F H Y VP L+K + + G +
Sbjct: 13 RILGILGHPVAHSASPAMHNAAFAAQGMHAMYGAFDVP--PSQLEKAIAGIRALGLLGVN 70
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P+KEAVM + D+V P A+ + AVNTI+ R G+LIGYNTD + ++E ERG
Sbjct: 71 VTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLE----ERG 124
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG 348
+ +AGR V+ GAGGA RA+A G AR+ I + +RA+ LA+D+
Sbjct: 125 VR---------VAGRNAVVLGAGGAARAVALHLGMAGVARLTIINRSRQRAEFLAADLAR 175
Query: 349 A--------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAV 399
A A P + + ++ N TPLGM P+T+ P+ + L + +V+D V
Sbjct: 176 AKTPVRAEVADPGSEEARAALAEAGLVVNCTPLGMEPDTESTPLEDVGLLPAHCVVYDTV 235
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +TRLL++A G I V+G+ M + Q + + G+ P + MR LA
Sbjct: 236 YRPLETRLLREARQHGLITVNGLAMLVHQGACAWEYWFGRRGPVDVMRTAALAAL 290
>gi|383753808|ref|YP_005432711.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365860|dbj|BAL82688.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 283
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFA 226
I T+ G+I P+ HS P+L N ++YN +P+ + L + + + +
Sbjct: 2 ITGKTQNLGVIGWPIAHSLSPVLQNAAIEKAGIDYNYTALPVAPEKLAEAVTGLKALHYR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G++V P+K A+M DE+ A+ I AVNT++ +GKL G+NTDC
Sbjct: 62 GWNVTIPHKTAIMPLLDEIDEDARIIGAVNTVVN--DNGKLKGFNTDC------------ 107
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
G+ + + G+ VL GAGGA RA+ +G K+ VV+ + +A+SLA++
Sbjct: 108 -LGFMGALTKRQAAIKGKKVVLLGAGGAARAVIWGLIKAEAQEVVLGVRNPAKAESLAAE 166
Query: 346 VMGAARPFEDILNFQPEK-------GAILANATPLGMHPNTDRVP-VSEETLRDYQLVFD 397
+ + +++ E+ A+L N TPLGM P D P V + +V+D
Sbjct: 167 FSRYGK--VTVCHWESEEFTQVLADCALLVNTTPLGMTPKVDACPPVDWSKVNPSAVVYD 224
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+YTP +T L+ A G +I++G EM Q L+TG E M+
Sbjct: 225 IIYTPAETLFLRQAREHGHVIINGEEMLAGQGAAALQLWTGCEPDLSCMQ 274
>gi|145577917|gb|ABP82677.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
thompsoni]
Length = 238
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + +AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|256811286|ref|YP_003128655.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
gi|256794486|gb|ACV25155.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
Length = 282
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 160/295 (54%), Gaps = 25/295 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ AQ I AVNTI + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDRDAQLIGAVNTI--KIENGKAIGYNTDGIGARKALEEEIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + G+ V+ GAGGA RA+AF ++ ++I + E+A+ LA ++
Sbjct: 120 E-------------VKGKNIVIYGAGGAARAVAFDL-AKDNNIIIANRTVEKAEKLAREI 165
Query: 347 MGAA-RPF-EDI----LNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
+ F E+I LN + ++ NATP+GM+PN D P V + LR+ +V D +
Sbjct: 166 AEKLNKKFGEEIKFGGLNVDLDDIDVVINATPIGMYPNVDVEPIVKADKLREDMVVMDLI 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LLK+A+ A A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 226 YNPLETVLLKEAKKANAKAINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|374603053|ref|ZP_09676038.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
gi|374391366|gb|EHQ62703.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
Length = 297
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 21/289 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ T VF +I P+ HSK P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSKSPLMHNAALRELGLNAVYTAFHVAPEQLEQAIQGMRALGIG 75
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAVM + DEV A I AVNTI+ R +G+LIGYNTD + ++++ +
Sbjct: 76 GMNVTIPHKEAVMAYLDEVDESASVIGAVNTIVNR--NGRLIGYNTDGLGFVRSLQEEMI 133
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
S L +L GAGGA R +A+ G R + I + RA++LA D
Sbjct: 134 ------------SDLRESRILLIGAGGAARGIAYALLKAGCRRLHIANRTLGRAEALAHD 181
Query: 346 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ L +P A I+ + T +GMHP+ D VP + L +V D VY
Sbjct: 182 LSAFGTVSAVQLGERPAIDAHEVDIVIHTTSVGMHPDVDAVPFDPDWLLPDMIVSDIVYN 241
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
P +T LL++A G SG+ MF+ Q L+TG AP MRE V
Sbjct: 242 PLETALLREASKRGCRPHSGLGMFVYQGAIALELWTGAAAPAALMREQV 290
>gi|392960610|ref|ZP_10326077.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|421054632|ref|ZP_15517598.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|421058184|ref|ZP_15520904.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
gi|421067306|ref|ZP_15528799.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|421071495|ref|ZP_15532612.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392440621|gb|EIW18294.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|392447014|gb|EIW24280.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392449968|gb|EIW27032.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|392454854|gb|EIW31668.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|392461302|gb|EIW37514.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
Length = 281
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 157/290 (54%), Gaps = 26/290 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I + TK G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTKKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKTIGYNTDA------------ 107
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERA----KS 341
+G+ S G + + ++ GAGGA RA+A G G + +I + E+A K
Sbjct: 108 -QGFVQSILSNGIKITEQTAIILGAGGAARAVACGLFQNGIKNIIIGARNLEKAQQFVKL 166
Query: 342 LASDVMGAARPFEDILNFQP--EKGAILANATPLGMH-PNTDRVPVSEETLRDYQLVFDA 398
+++V A +ED FQ ++ IL N+TP+GM +T+ +P+ ETL V D
Sbjct: 167 FSTNVDIQAFDWED-SGFQNLLQECDILINSTPIGMSVHDTEVLPIPWETLNPEAAVCDL 225
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+Y P KT+LL AE G I ++G+ M + Q F L+T ++ P++ M E
Sbjct: 226 IYNPSKTQLLLSAEEHGHIAINGLGMLIEQGALAFELWTSEQGPRQIMSE 275
>gi|145577909|gb|ABP82673.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar higo]
Length = 238
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + +AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|428313606|ref|YP_007124583.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
gi|428255218|gb|AFZ21177.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
Length = 293
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 223
+ I TK+ G+I P+ HS P++HN + + IY+P + DL + +++
Sbjct: 1 MSQITGKTKLLGVIGDPIEHSLSPVMHNAAIAEMGLDYIYLPFPIKTADLGVAIAGFAAI 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
GFSV P+K+A++ EV +A+ AVNT+ R ++ G NTD E + ++
Sbjct: 61 GVQGFSVTIPHKQAIISLLSEVSAIAKLTGAVNTVWR--TEQGWSGTNTDVEGFVAPLQA 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 342
R + T V+ G GGA RA+ G G A + + + ++
Sbjct: 119 L--NRDWSQSTP-----------VILGHGGAARAVVVGCTQLGCAEIHVVGRNVQKLSQF 165
Query: 343 ASDVMGAARP-------FEDILNFQPEKGAILANATPLGMHPNTDRVPV---SEETLRDY 392
+ A P ++++ P+ ++ N+TP+GM+PN D+ P+ + E LR
Sbjct: 166 QQSWVNAPLPITLNVHRWDELPELLPQAD-LVVNSTPVGMYPNVDQSPLDAAAMELLRPD 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+ +D +YTP T+ L+ A+ GA+ + G+EM ++Q ++ + P + MR
Sbjct: 225 AIAYDLIYTPNPTQFLQQAQEQGAVAIDGLEMLVQQGAAALKIWVEQTPPVDIMR 279
>gi|384208166|ref|YP_005593886.1| shikimate 5-dehydrogenase [Brachyspira intermedia PWS/A]
gi|343385816|gb|AEM21306.1| shikimate 5-dehydrogenase [Brachyspira intermedia PWS/A]
Length = 296
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 33/299 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
INA+T + GL + P HS PI+HN F +N N IY+ VD +LK+ ++ + +
Sbjct: 15 QINAETILTGLFASPSKHSISPIMHNEAFNKLNLNYIYLAFEVDKSNLKEAVNSIKTLNM 74
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ P K+ V+K+ D++ A+ +VNTI+ +G L GY+TD E I ++E+
Sbjct: 75 RGGNLSMPNKKEVIKYLDKISEAAELSQSVNTIVN--DNGILTGYSTDGEGFIKSLEE-- 130
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKSL 342
E+ + + + + G GGA A+ A G + + +F D ++ K +
Sbjct: 131 -EQVF----------IKDKNITILGTGGASIAIISQAALYGVKEIYVFKRDTNWNEQKKI 179
Query: 343 ASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDY 392
++ +DIL + + IL NAT +GM + V + E+T R+
Sbjct: 180 IDNIASKTNCNITLYSLENKDILKSKIDNSYILINATSVGMK---EDVSIIEDTSFFRND 236
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T K+ P E+++ I+
Sbjct: 237 LVVSDCIYHPAKTKLLKIAEKEGCKIINGMGMLLYQGALAFELWTNKKMPVEYVKNIIF 295
>gi|393233433|gb|EJD41005.1| Pentafunctional AroM protein [Auricularia delicata TFB-10046 SS5]
Length = 1557
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 209/462 (45%), Gaps = 38/462 (8%)
Query: 7 RPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
R K GG + ++ K L+ + L L +Y+D EL + + G G +++
Sbjct: 1114 RTKAQGGAFPDEKTKEALDLIELGRRLACEYLDVELSLP--VAGVDTLVKNKGKSKVIAS 1171
Query: 66 NLDCETPSEEDLGYLVSR--MQATGADIIKLVFSVNDITE---IARIFQLLSH-CQVPII 119
D D + ++ + A DI+K+V + N I + + R +S + P++
Sbjct: 1172 WHDWSGKMRWDGPDVKAKYALAAAFGDIVKIVGAANSIQDNFALRRFVDSVSGPGRPPVL 1231
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFG 177
A ++G G +S++L+P + + + L P P S+ Q + H+ + F
Sbjct: 1232 AINMGAAGQMSRILNPVLS-PVTHPLL---PTRAAPGQLSVAQIQQALHLLGLLPARQFF 1287
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKE 236
L P+ S P LHN F+ + Y + ++ + + F G SV P+K
Sbjct: 1288 LFGTPISKSMSPTLHNTGFKELGLPHTYGLLETAEVDETIRAALKDNAFGGASVTIPHKL 1347
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
A++ D V P AQAI AVNT+IR+ +DG L G NTD ++ A
Sbjct: 1348 AIIPLLDAVSPHAQAIGAVNTVIRQ-ADGSLYGDNTD----------------WRGIVAC 1390
Query: 297 FGSPLAGRMF-VLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFE 354
G+P G + GAGG RA + K+ GA RV + + A SLA+ +G
Sbjct: 1391 VGTPPQGEWTGCVLGAGGTARAAVYALKALGASRVWVVNRTRANADSLAA-ALGPGVHAA 1449
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR-DYQLVFDAVYTPRKTRLLKDAEA 413
++ + A++ + P + + E R + +V D Y P +T LLK A+A
Sbjct: 1450 NVADLASAPPAVIVSTVPAAGTESAAWLKARELFARAEGGVVVDMAYAPLETPLLKLAKA 1509
Query: 414 -AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AG +V G+E+ L Q QF L+TG+ APK +RE VL +
Sbjct: 1510 QAGWRVVPGIEVLLEQGYCQFELWTGRRAPKGVVRETVLNAY 1551
>gi|298531015|ref|ZP_07018416.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509038|gb|EFI32943.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 268
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 25/269 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+ +G++ + +GHS P LHN F+ +Y+ ++ +L F +G SV
Sbjct: 3 QAYGVLGRTLGHSLSPYLHNCAFQAAGMKRVYLKWEIEPENLGDFIRAVRILPLSGASVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM++ D + P A + AVNT+ L G NTDC + IED +
Sbjct: 63 IPYKEDVMEYLDYISPEASDMGAVNTLYWHRKS--LCGTNTDCRGFMAPIEDLQLDSA-- 118
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
++ GAGGA RA+ +G K G + + + + ++A ++A + +
Sbjct: 119 ---------------LILGAGGASRAVLYGLKRMGISNIYLTNRSKKKALAMAGEFNVKS 163
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
P+++ K +L N TPLG + + E ++ +++V+D VY P +TRLL+
Sbjct: 164 IPWDERYRL---KADLLVNTTPLGTAGDLQDLSPWESSIFPFKIVYDLVYNPLQTRLLQQ 220
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
A A GA VSG+ MF+ QA+ QF ++TG+
Sbjct: 221 ARAHGAHTVSGLSMFVHQALKQFKIWTGQ 249
>gi|354582185|ref|ZP_09001087.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
gi|353199584|gb|EHB65046.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
Length = 284
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
G++ P+GHSK P +HN +N G Y+P+ + + L + + F G +V P
Sbjct: 13 LGVMGDPIGHSKSPAMHNAALAALNLQGAYIPLHIRPERLGDAIESVKTLGFRGVNVTIP 72
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKN 292
+K VM++ D + A I AVNTI+ +G+L GYNTD + ++ E+A +
Sbjct: 73 HKVEVMRYLDAIDEGAARIGAVNTIVN--DNGRLTGYNTDGIGYVRSLKEEACPD----- 125
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAAR 351
L G+ + GAGGA R + + + + I + ++AK+LA + A
Sbjct: 126 --------LKGKRIAVLGAGGAARGIIYALIGEQPESISIINRTEDKAKALAQEWGTMAE 177
Query: 352 PF---EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
E+ + ++ N T +GMHP +PV E + + +V D +Y P KT LL
Sbjct: 178 LHGCGEEHAKEVLSRAEVIINTTSVGMHPRISEMPVHPEWIPEGAVVSDLIYNPLKTELL 237
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+E + G+ MF+ Q +TG AP E M+E VLA
Sbjct: 238 LQSEQRNCTVHGGLGMFINQGAYALEYWTGLRAPVEAMKEAVLASL 283
>gi|410460448|ref|ZP_11314126.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
gi|409927063|gb|EKN64209.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
Length = 279
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGL+ PVGHS PI+HN F + + Y V ++L+ + + +GF+V
Sbjct: 3 KLFGLLGHPVGHSMSPIMHNDQFSFLGLDCYYHAFDVHPNELENAVNGIKALGLSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +MK+ DE+ A I AVNT++ R DGKL GYNTD + +++
Sbjct: 63 IPHKVEIMKYLDEIDEEALQIGAVNTVVNR--DGKLYGYNTDGKGFAVSLQTIA------ 114
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD----V 346
G+ + ++ GAGGA R + GA + I + E+A+ L S+ V
Sbjct: 115 ------GADFLNKKMLIVGAGGAARGVFVTLARMGANAIDIANRTVEKAEELISNNPYRV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
AR ++ E I+ N T +GM P + +P+ ++ ++ D +Y P +T+
Sbjct: 169 QSNARSIKEAEKNLAEY-QIIINTTSVGMSPKIEELPLQLTNMQPGTILSDIIYNPLETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+ + AGA+ +G+ MF+ Q F ++T ++ M +IV+ +
Sbjct: 228 WLKEGKIAGAVTQNGIGMFVGQGALAFEMWTKEKPDYNRMEQIVMKQL 275
>gi|333371747|ref|ZP_08463689.1| shikimate dehydrogenase [Desmospora sp. 8437]
gi|332975676|gb|EGK12562.1| shikimate dehydrogenase [Desmospora sp. 8437]
Length = 283
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 147/291 (50%), Gaps = 26/291 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++A T+ GLI PV HSK P + N FR +Y+ V ++L + + S F
Sbjct: 3 LDAVTEKTGLIGHPVAHSKSPEMMNEAFRREGLPWVYLAFDVASEELGRAVAGLKSLGFR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G++V P+K AVM+ DEV A+ I AVNT+I R +G+LIG NTD + E ++
Sbjct: 63 GWNVTIPHKVAVMEHLDEVEESAREIGAVNTVIHR--NGRLIGTNTDGAGYL---ESLVR 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E G+ + GR V+ GAGGA RA+ + GA + R + A D+
Sbjct: 118 ETGFD---------VKGRRVVILGAGGAARAVGYTLARAGAEQIGI---VNRTEKKAQDL 165
Query: 347 MGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
R + P + +L T +GMHP+ + PV +L LV D +
Sbjct: 166 ADHLRRWTRADGISPGEADTAIREADLLVQTTSVGMHPHPEGCPVDPASLHKDLLVSDLI 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
Y PR+TRLL++A+ GA + SG+ M L Q F +TG++AP E M E++
Sbjct: 226 YHPRQTRLLQEAKTRGARVHSGLGMLLHQGALAFERWTGRQAPVERMGEVL 276
>gi|159906101|ref|YP_001549763.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
gi|238687001|sp|A9AB08.1|AROE_METM6 RecName: Full=Shikimate dehydrogenase
gi|159887594|gb|ABX02531.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
Length = 279
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 23/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TK+ GLI PV HS PI+HN + + N Y+ V ++LK S + A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ A++I AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEE--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K+G + ++ G+GGA RA++F ++ + I + + E+AK L+ ++
Sbjct: 117 ----KSGILIN------KNILIIGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEEL 165
Query: 347 MGAARPFEDI----LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYT 401
+ I LN + I+ N TP+GM+P+TD PV ++ +V D +Y
Sbjct: 166 STKLKKENSIKYGALNIDIKNFDIIINTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIYN 225
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P + LK+A G ++G+ M + Q F ++TGK+ M++ + +K
Sbjct: 226 PLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTGKKPDVYVMKKAINSKI 278
>gi|397690320|ref|YP_006527574.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
gi|395811812|gb|AFN74561.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
Length = 293
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 34/291 (11%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAG 227
N +TK+ G+I P+ HS P++HN F N IY+P V LK + G
Sbjct: 8 NHNTKIIGIIGHPIKHSFSPLMHNLAFELTKLNYIYLPFDVPPTLLKDSLKGMIALGIKG 67
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
F+V P KE V+ ++ A I AVNTI+ +G L GYNTD I ++
Sbjct: 68 FNVTIPLKEKVIPLLKDISEEANIIGAVNTIVN--DEGVLRGYNTDVLGVIESLN----- 120
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI------------D 335
+ L + GAGGA R++ + A R +V +I +
Sbjct: 121 --------PYKEELQNSAVTVIGAGGAARSVIY-ALIRHFKVERINIVNRTEQIAESLKE 171
Query: 336 FERAKSLASDVMGAARPFEDILN-FQPEKGAILANATPLGMHPNTDRVPVS-EETLRDYQ 393
+ K L +++ D++N F K ++ N T +GM P+ D + E+ Q
Sbjct: 172 YFSTKMLFNNIKAYPLMPPDLVNTFNSSK--LIVNTTSMGMFPDIDDAATTIPESFNKEQ 229
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+VFD VYTP KT+LLK AE+ GA I++G+ MF+ Q F L+TG+E PK+
Sbjct: 230 IVFDVVYTPIKTKLLKLAESRGARIITGLRMFVEQGAKSFELWTGEEMPKD 280
>gi|387783729|ref|YP_006069812.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
gi|338744611|emb|CCB94977.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
Length = 285
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 393
++ A D+ FQ E G +L NAT +GM + + +P+ +T +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGM--DGESLPIPTDTKFPEGL 222
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
LV D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|150400882|ref|YP_001324648.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
gi|166219472|sp|A6UU64.1|AROE_META3 RecName: Full=Shikimate dehydrogenase
gi|150013585|gb|ABR56036.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
Length = 278
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
IN+ TK+ GLI PV HS P +HN + + N +Y+ V+ +LK + + +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ D++ A+ I AVNT+ + + K IGYNTD + +IE+ I
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E N ++ GAGG+ RA+ ++ + I + E+A+ +A+D+
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAVCCEL-AKNNNLTIINRTVEKAEIIANDL 165
Query: 347 ---------MGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVF 396
G ++ NF I+ N T LGM+PN D + P+S + ++ +V
Sbjct: 166 SNKLNNAVYYGGLNHNYNMANFD-----IIINTTSLGMYPNVDNKPPISMQNIKKDAVVM 220
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D +Y P++T LK+A+ G ++G+ M + Q F ++TG + M+ ++
Sbjct: 221 DLIYNPKETLFLKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAII 275
>gi|225028702|ref|ZP_03717894.1| hypothetical protein EUBHAL_02981 [Eubacterium hallii DSM 3353]
gi|224954012|gb|EEG35221.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 636
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 27/307 (8%)
Query: 160 LRQTY-KVEHI---NADTKVFGLISKPVGHS-KGPILHNP-TFRHVNYNGIYVPMFVDDL 213
LR Y + E+I N ++ GL PV + GP++ + +NY I + + ++L
Sbjct: 120 LRSKYFRKEYILSKNYRAELVGLFGNPVDENPTGPMMEAGFAAQGLNYRYITMKVEKENL 179
Query: 214 KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 273
K + + G ++ P+K AV+ F DE+ P A+ I AVN+I R DG+LIG NTD
Sbjct: 180 KDAIAGIRAIGMRGLNLTIPHKIAVIPFLDELSPAAKIIGAVNSI--RVQDGQLIGENTD 237
Query: 274 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF 332
+ +T++ + G L GR+ + G+GGA RA+A GA V I
Sbjct: 238 GKGFVTSLMET-------------GIELNGRIITVLGSGGAARAVAVECAISGAETVNIV 284
Query: 333 DIDFERAKSLASDVMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEE 387
+ ER K LA + ++ PE +L N T +G++P+ ++ ++ E
Sbjct: 285 ARNEERGKELADLISEKTEAQGVYFTWKGSVPIPEGTEVLVNCTNVGLYPDENKPDITYE 344
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+R V D V+ P +T+ LK+A+A GA V+G+ M + QA + L+T APK+ M+
Sbjct: 345 DIRKNMTVCDVVFNPPETKFLKEAKARGAATVNGLGMLVNQAALNYCLWTENMAPKDMMK 404
Query: 448 EIVLAKF 454
E +L +F
Sbjct: 405 EALLREF 411
>gi|427720930|ref|YP_007068924.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
gi|427353366|gb|AFY36090.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
Length = 301
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 150/302 (49%), Gaps = 38/302 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRH-------VNYNGIYVPMFVD--DLKKFFST 219
I TK+ G+I PV HS P++HN + + +Y+P ++ +L +
Sbjct: 6 ITGKTKILGVIGHPVEHSLSPLMHNAALAQMVEDIAQLGLDYVYLPFPIEPQNLAVAIAG 65
Query: 220 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 279
+++ GF+V P+K+A++ E+ PLAQ++ AVNT+ R+ + + +G NTD E I
Sbjct: 66 FAAVGVVGFNVTIPHKQAIIPLLSEISPLAQSVGAVNTVTRQ--NNQWVGTNTDVEGFIV 123
Query: 280 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFER 338
++ ++ + ++ V+ G GGA RA+ G G A + I + E+
Sbjct: 124 PLQ------------TTYHQDWSQKIAVILGNGGAARAVVAGCHQLGFAEIHIVGRNHEK 171
Query: 339 AKSLASDVMGAARPFEDILNFQ-----PE---KGAILANATPLGMHPNTDRVPVSEE--- 387
+ + + P + L P+ + +L N TP+GM+P + P+S E
Sbjct: 172 LTAFRNS--WSNSPLNENLQVHEWLELPKLIPQADLLVNTTPIGMYPKINDSPLSAEEMS 229
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFM 446
+L + +D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +EA P + M
Sbjct: 230 SLSPNAIAYDLIYIPQPTQFLQQAQKQGAITIDGLEMLVQQGVAALKIWLQREAIPVDVM 289
Query: 447 RE 448
R+
Sbjct: 290 RQ 291
>gi|312863765|ref|ZP_07724003.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
gi|311101301|gb|EFQ59506.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
Length = 285
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 393
++ A D+ FQ E G +L NAT +GM + + +P+ +T +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQDDLLVNATSVGM--DGESLPIPTDTKFPEGL 222
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
LV D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|145577903|gb|ABP82670.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 GIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
I+ T +GMHP+ + P+ + + +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSSKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|206580594|ref|YP_002240458.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288937158|ref|YP_003441217.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|290512580|ref|ZP_06551946.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
gi|206569652|gb|ACI11428.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288891867|gb|ADC60185.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|289774921|gb|EFD82923.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
Length = 287
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 341 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + D L + + IL NAT +GM P ++ + ++ LR
Sbjct: 168 ETVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSIL 286
>gi|431429706|ref|ZP_19512808.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|431759137|ref|ZP_19547752.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
gi|430587940|gb|ELB26151.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|430626334|gb|ELB62910.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
Length = 284
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTYDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMPSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM D+ P+ + + L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|251780543|ref|ZP_04823463.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084858|gb|EES50748.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 270
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 20/257 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEREDLKKFADSLRVLKIKGCNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIRAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
+ ++ ++ G GGA +A RG + + +++ SL D + +
Sbjct: 109 LIRKNIEVNDKVAMVLGTGGASKAAVTLLLDRGIKKIYLVSRSKKSISLEEDKRIEYKTY 168
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
+I + KG IL NATP+GM+PN D PV+E+ + ++ ++ D +Y PR+T+ L++ +
Sbjct: 169 NNINDI---KGDILINATPVGMYPNVDFKPVNEKIIDNFDILIDLIYNPRETQFLQNGKI 225
Query: 414 AGAIIVSGVEMFLRQAI 430
+ G+EM + QAI
Sbjct: 226 LNKKVCGGLEMLVGQAI 242
>gi|284047672|ref|YP_003398011.1| shikimate dehydrogenase [Acidaminococcus fermentans DSM 20731]
gi|283951893|gb|ADB46696.1| Shikimate dehydrogenase substrate binding domain protein
[Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 21/287 (7%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
HI+ T+ L+ P+ S + N + N +Y + L +
Sbjct: 2 HIDIHTRFITLLGDPLAQSFAARMQNRGYEAAGLNLVYFYTITGQEHLGDIVNGLRYMPV 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
AGF+V P K V+++ DE+ PL + + + NT+++ P DG+L GYNTD TA+ +A
Sbjct: 62 AGFAVTKPNKVKVLEYLDELDPLCRKMGSSNTVVKLP-DGRLKGYNTDGTGFYTALTEA- 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
G + F G+GGAGRA+ GA ++ I D+ E A+SL
Sbjct: 120 ------------GIDVTKERFFCFGSGGAGRAMCSVLAYHGATKIWITDLFPESARSLVE 167
Query: 345 DVMGAARPFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
D+ P +++ ++ + ++ NA+ +GM + + P+ E ++ Q FDA Y
Sbjct: 168 DINKNFAPVAEMVPYEDFSKVGEATVVLNASGVGMGQSIGKTPLPPEFIQKDQFYFDACY 227
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
P +TR L++AE AG +++G+ M L Q Q L++G++AP+E MR
Sbjct: 228 NPARTRFLENAEKAGCRVMNGLTMSLYQGTAQVELWSGQKAPEEAMR 274
>gi|430837903|ref|ZP_19455853.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430858336|ref|ZP_19475964.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|431369954|ref|ZP_19509653.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
gi|430492183|gb|ELA68597.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430545545|gb|ELA85518.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|430583701|gb|ELB22059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
Length = 284
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESVRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|300811908|ref|ZP_07092369.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497105|gb|EFK32166.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 311
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 31/300 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K+ V+ + D++ +Q AVNTI+ G L GY TD
Sbjct: 85 GSNISMPNKKKVIPYLDKLDKTSQMCDAVNTIVNE--HGVLTGYTTDG------------ 130
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFER-AKSLA- 343
G+ G + G++ LAGAGGA +A A GA+ + IF++D ++ A+++
Sbjct: 131 -MGWLRALKKDGQDVKGKIITLAGAGGAATPIAVTASLEGAKEIRIFNLDDDKWAQAVKN 189
Query: 344 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 393
+D + + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VETINKETDCVASVHHLEDKEDFKQSIAESDIYCDATSVGMNPLQDQTLVEDPSWFHEDM 249
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+ A
Sbjct: 250 VVSDTVYAPRKTKLMEVAEKAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIMDA 309
>gi|167043755|gb|ABZ08447.1| putative Shikimate / quinate 5-dehydrogenase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 273
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 32/290 (11%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+ + +I P+ HS P +HN FRH+ + Y+ + +L + AGF+V
Sbjct: 2 SNTYAVIGDPIDHSLSPNIHNAAFRHLKLDHTYIAYKIPAGELSAGIEALKAIKIAGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +MKF DE+ + I AVNT++ DGKL GYNTD + D IK++
Sbjct: 62 TIPHKIEMMKFLDEMDTTCKIIGAVNTVLNE--DGKLKGYNTD----MIGFLDPIKKKNL 115
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLA---SDV 346
+ +L GAGGA RA+ K + +++ I + E A LA +
Sbjct: 116 ---------TIKDSQVLLLGAGGAARAIVTAMVKEKASKITIVNRTMENANKLAEFAKKI 166
Query: 347 MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
G A D ++ Q I + N+T +GM + P+S E + +V+D VY
Sbjct: 167 GGNA----DTVSIQEANKLIADYKFIINSTSIGMR--NEPSPISTENISKDSIVYDIVYQ 220
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
P T L+K ++ GA I+ G EM L QA F ++ EAP + M++++L
Sbjct: 221 PINTDLIKKSKENGATIIYGYEMLLSQAACSFEIWHKMEAPYDVMKKMLL 270
>gi|69249504|ref|ZP_00604998.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257878246|ref|ZP_05657899.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257880974|ref|ZP_05660627.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257889556|ref|ZP_05669209.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257892504|ref|ZP_05672157.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260559796|ref|ZP_05831975.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|261207823|ref|ZP_05922508.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289566376|ref|ZP_06446804.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|293560591|ref|ZP_06677079.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|293569865|ref|ZP_06680952.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|294621710|ref|ZP_06700874.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|314937722|ref|ZP_07845045.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|314942645|ref|ZP_07849473.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|314948840|ref|ZP_07852211.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|314950852|ref|ZP_07853922.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|314992913|ref|ZP_07858311.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|314995671|ref|ZP_07860762.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|383328271|ref|YP_005354155.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|389868552|ref|YP_006375975.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|406581268|ref|ZP_11056426.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|406583572|ref|ZP_11058628.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|406585881|ref|ZP_11060835.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|406591382|ref|ZP_11065666.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410937496|ref|ZP_11369356.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|415891282|ref|ZP_11549686.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|416142973|ref|ZP_11599688.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|424790457|ref|ZP_18217001.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|424795666|ref|ZP_18221490.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|424819259|ref|ZP_18244382.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|424857325|ref|ZP_18281485.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|424864847|ref|ZP_18288746.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|424950425|ref|ZP_18365589.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|424953710|ref|ZP_18368654.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|424956712|ref|ZP_18371476.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|424959170|ref|ZP_18373771.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|424963383|ref|ZP_18377611.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|424969022|ref|ZP_18382613.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|424969603|ref|ZP_18383161.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|424973123|ref|ZP_18386414.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|424976239|ref|ZP_18389343.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|424980094|ref|ZP_18392912.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|424984020|ref|ZP_18396574.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|424987351|ref|ZP_18399729.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|424990468|ref|ZP_18402680.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|424993800|ref|ZP_18405775.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|424997154|ref|ZP_18408921.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|425000132|ref|ZP_18411713.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|425004114|ref|ZP_18415443.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|425006313|ref|ZP_18417493.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|425009912|ref|ZP_18420895.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|425014063|ref|ZP_18424759.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|425016425|ref|ZP_18426989.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|425019992|ref|ZP_18430322.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|425024056|ref|ZP_18434145.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|425031046|ref|ZP_18436191.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|425034089|ref|ZP_18439001.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|425038010|ref|ZP_18442643.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|425040819|ref|ZP_18445261.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|425044491|ref|ZP_18448650.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|425049209|ref|ZP_18453074.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|425051105|ref|ZP_18454787.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|425062417|ref|ZP_18465577.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|427394923|ref|ZP_18887845.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430825333|ref|ZP_19443538.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430828586|ref|ZP_19446706.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430830533|ref|ZP_19448591.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430844277|ref|ZP_19462175.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430846256|ref|ZP_19464116.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430854634|ref|ZP_19472347.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430862200|ref|ZP_19479552.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430870903|ref|ZP_19483490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430959924|ref|ZP_19487059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|431008916|ref|ZP_19489356.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|431195518|ref|ZP_19500496.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|431228613|ref|ZP_19501754.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|431258926|ref|ZP_19505103.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|431540493|ref|ZP_19517950.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|431745997|ref|ZP_19534833.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|431748492|ref|ZP_19537250.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|431754638|ref|ZP_19543299.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|431765421|ref|ZP_19553935.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|431770633|ref|ZP_19559032.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|431773158|ref|ZP_19561490.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|431775980|ref|ZP_19564249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|431778556|ref|ZP_19566766.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|431782083|ref|ZP_19570221.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|431785527|ref|ZP_19573552.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|447913136|ref|YP_007394548.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
gi|68194130|gb|EAN08666.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257812474|gb|EEV41232.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257816632|gb|EEV43960.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257825916|gb|EEV52542.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257828883|gb|EEV55490.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260074020|gb|EEW62343.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|260078206|gb|EEW65912.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289161814|gb|EFD09686.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|291587613|gb|EFF19490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|291598719|gb|EFF29772.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|291605414|gb|EFF34860.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|313590144|gb|EFR68989.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|313592556|gb|EFR71401.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|313596985|gb|EFR75830.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|313598582|gb|EFR77427.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|313642925|gb|EFS07505.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644783|gb|EFS09363.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|364089488|gb|EHM32174.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|364094077|gb|EHM36288.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|378937965|gb|AFC63037.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|388533801|gb|AFK58993.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|402920798|gb|EJX41286.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|402924110|gb|EJX44343.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|402926323|gb|EJX46367.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|402929074|gb|EJX48868.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|402933157|gb|EJX52612.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|402938462|gb|EJX57471.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|402939866|gb|EJX58747.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|402945304|gb|EJX63662.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|402949532|gb|EJX67586.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|402949997|gb|EJX68022.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|402951232|gb|EJX69181.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|402959301|gb|EJX76568.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|402963746|gb|EJX80595.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|402967447|gb|EJX83999.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|402969940|gb|EJX86316.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|402970247|gb|EJX86605.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|402974689|gb|EJX90713.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|402979659|gb|EJX95321.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|402981658|gb|EJX97173.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|402986775|gb|EJY01884.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|402989906|gb|EJY04808.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|402990517|gb|EJY05387.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|402997497|gb|EJY11816.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|402999714|gb|EJY13891.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|403001557|gb|EJY15603.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|403007094|gb|EJY20689.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|403008172|gb|EJY21700.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|403010421|gb|EJY23803.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|403016457|gb|EJY29275.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|403020368|gb|EJY32910.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|403021388|gb|EJY33853.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|403027677|gb|EJY39552.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|403028708|gb|EJY40517.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|403029808|gb|EJY41540.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|403038452|gb|EJY49667.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|403038554|gb|EJY49765.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|404452798|gb|EJZ99949.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|404456367|gb|EKA03090.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|404461989|gb|EKA07837.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|404467858|gb|EKA12918.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410734109|gb|EKQ76030.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|425724059|gb|EKU86943.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430446226|gb|ELA55911.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430483135|gb|ELA60234.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430483419|gb|ELA60497.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430496867|gb|ELA72926.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430539050|gb|ELA79312.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430548293|gb|ELA88198.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430549491|gb|ELA89323.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430556408|gb|ELA95916.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|430558702|gb|ELA98113.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430560831|gb|ELB00123.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|430571896|gb|ELB10770.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|430574915|gb|ELB13678.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|430577021|gb|ELB15626.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|430593687|gb|ELB31669.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|430609424|gb|ELB46618.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|430613695|gb|ELB50698.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|430619232|gb|ELB56060.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|430628508|gb|ELB64943.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|430634900|gb|ELB71006.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|430637123|gb|ELB73161.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|430642095|gb|ELB77878.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|430643629|gb|ELB79348.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|430647496|gb|ELB82942.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|430648098|gb|ELB83521.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|445188845|gb|AGE30487.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
Length = 284
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|152968656|ref|YP_001333765.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|262044888|ref|ZP_06017930.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012030|ref|ZP_08307247.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|365142635|ref|ZP_09347751.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|378976949|ref|YP_005225090.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033134|ref|YP_005953047.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|419973485|ref|ZP_14488909.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980108|ref|ZP_14495395.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985021|ref|ZP_14500164.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419990105|ref|ZP_14505078.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995985|ref|ZP_14510789.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003092|ref|ZP_14517740.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007859|ref|ZP_14522351.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013830|ref|ZP_14528139.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019141|ref|ZP_14533335.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024633|ref|ZP_14538645.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031626|ref|ZP_14545446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037930|ref|ZP_14551581.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042184|ref|ZP_14555678.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048366|ref|ZP_14561680.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053592|ref|ZP_14566769.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420059464|ref|ZP_14572471.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065185|ref|ZP_14577992.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073114|ref|ZP_14585744.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075986|ref|ZP_14588460.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084181|ref|ZP_14596446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909952|ref|ZP_16339747.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919298|ref|ZP_16348801.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424828935|ref|ZP_18253663.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078403|ref|ZP_18481506.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425079840|ref|ZP_18482937.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425089035|ref|ZP_18492128.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425089958|ref|ZP_18493043.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151081|ref|ZP_18998826.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428931502|ref|ZP_19005097.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|428938468|ref|ZP_19011595.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|449051289|ref|ZP_21731888.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
gi|150953505|gb|ABR75535.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|259037615|gb|EEW38844.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534019|gb|EGF60671.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|339760262|gb|AEJ96482.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|363651417|gb|EHL90485.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|364516360|gb|AEW59488.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397347024|gb|EJJ40134.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397348124|gb|EJJ41226.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353005|gb|EJJ46082.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366106|gb|EJJ58725.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397367720|gb|EJJ60329.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397370399|gb|EJJ62982.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379152|gb|EJJ71350.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383945|gb|EJJ76072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389307|gb|EJJ81249.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398570|gb|EJJ90232.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397399773|gb|EJJ91423.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404887|gb|EJJ96373.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415554|gb|EJK06739.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416833|gb|EJK08003.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397423820|gb|EJK14737.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397432272|gb|EJK22936.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435462|gb|EJK26077.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438255|gb|EJK28767.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447948|gb|EJK38133.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450431|gb|EJK40536.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590264|gb|EKB63798.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405600173|gb|EKB73340.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405606765|gb|EKB79735.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614522|gb|EKB87221.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410116082|emb|CCM82372.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118329|emb|CCM91426.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414706351|emb|CCN28055.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305696|gb|EKV67813.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|426308001|gb|EKV70072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|427538900|emb|CCM94964.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876277|gb|EMB11271.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
Length = 287
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSIL 286
>gi|255542476|ref|XP_002512301.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548262|gb|EEF49753.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 146
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 86/126 (68%)
Query: 325 RGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV 384
+GARVV+ + F++AK LAS V G A ++ +F PE+G ILAN T +GM P D P+
Sbjct: 17 KGARVVVANRSFDKAKELASKVGGQAMTLAELKDFHPEEGMILANTTSVGMKPRIDDTPL 76
Query: 385 SEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+E L+ Y LVFDA+YTP+ TRLL++A+ GA V G EMF+ QA QF FTG APK+
Sbjct: 77 PKEALKHYSLVFDAIYTPKLTRLLREAQECGATTVYGTEMFINQAFVQFERFTGLPAPKQ 136
Query: 445 FMREIV 450
+R+++
Sbjct: 137 LIRDVL 142
>gi|145577893|gb|ABP82665.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
gi|145577895|gb|ABP82666.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + + + ++AK L + M L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|145577931|gb|ABP82684.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
roskildiensis]
Length = 238
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L GAGGA RA+ F G R + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q E I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMI 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|424935106|ref|ZP_18353478.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|407809293|gb|EKF80544.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 292
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 160 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 217
+R E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVV 60
Query: 218 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 277
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 278 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---D 333
+ A+ +A G + G+ + GAGGA AL A G + + IF D
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRD 165
Query: 334 IDFERAKSLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVS 385
F A+ + + F+ D L + + IL NAT +GM P ++ +
Sbjct: 166 KFFANAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLP 225
Query: 386 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+++ LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P +
Sbjct: 226 DDSFLRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVD 285
Query: 445 FMREIVL 451
+++ I+
Sbjct: 286 YIKSILF 292
>gi|187932786|ref|YP_001887325.1| shikimate 5-dehydrogenase [Clostridium botulinum B str. Eklund 17B]
gi|187720939|gb|ACD22160.1| shikimate dehydrogenase [Clostridium botulinum B str. Eklund 17B]
Length = 270
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEKEDLKKFADSLRVLKIKGCNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIKAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
++ ++ G GGA +A +G + + +++ L D R +
Sbjct: 109 LLRNNIEANDKVAMVLGTGGASKAAVTLLLDKGVKKIYLVSRSKKSIPLDLDNRIEYRIY 168
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
EDI N KG IL NATP+GM+PN D PV E+ + ++ ++ D +Y PR T+ L+ +
Sbjct: 169 EDIGNV---KGDILINATPVGMYPNVDNNPVDEKIINNFDVLIDLIYNPRDTKFLQCGKK 225
Query: 414 AGAIIVSGVEMFLRQAI 430
I G+EM + QAI
Sbjct: 226 LNKKICGGLEMLVGQAI 242
>gi|418963256|ref|ZP_13515095.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383343371|gb|EID21555.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 284
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRCYNMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+ V+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQVVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 343
+G+ SF + G+ V+ GAGGA A+ A G + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGTEEIFVFTRQSSFERVSQKM 165
Query: 344 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
++ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMPTKEIWQALEKKY 283
>gi|293553506|ref|ZP_06674134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430833289|ref|ZP_19451302.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430835984|ref|ZP_19453969.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|431295209|ref|ZP_19507097.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|431767006|ref|ZP_19555466.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
gi|291602383|gb|EFF32607.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430486744|gb|ELA63580.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430488824|gb|ELA65472.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|430581299|gb|ELB19744.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|430631879|gb|ELB68179.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
Length = 284
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|188589771|ref|YP_001922266.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
gi|188500052|gb|ACD53188.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
Length = 270
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 20/257 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEREDLKKFADSLRVLKIKGCNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIRAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
+ ++ ++ G GGA +A RG + + +++ SL D + +
Sbjct: 109 LIRNNIEVNDKVAMVLGTGGASKAAVTLLLDRGIKKIYLVSRSKKSISLDEDKRIEYKTY 168
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
+I + KG IL NATP+GM+PN D PV+E+ + ++ ++ D +Y PR+T+ L++ +
Sbjct: 169 NNINDI---KGDILINATPVGMYPNVDFKPVNEKIIDNFDILIDLIYNPRETQFLQNGKI 225
Query: 414 AGAIIVSGVEMFLRQAI 430
+ G+EM + QAI
Sbjct: 226 LNKKVCGGLEMLVGQAI 242
>gi|298490426|ref|YP_003720603.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
gi|298232344|gb|ADI63480.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
Length = 298
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 10 QQITGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFAAIG 69
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G SV P+K+A++ E+ P+AQAI AVNT+ + K +G NTD E I ++
Sbjct: 70 VVGLSVTIPHKQAIIPILTEISPIAQAIGAVNTVTHQ--GNKWVGTNTDVEGFIAPLQ-- 125
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA 343
++ + + V+ G GGA RA+ G G A + + + + K
Sbjct: 126 ----------TTYQQDWSHKRAVILGNGGAARAIVAGCVQLGLAEIHLVGRNMYKLKEFR 175
Query: 344 SDVMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 393
+ +E++ P +L N TP+GM+P D P+S E + +
Sbjct: 176 HSWQYSPYVDKFQVHAWEELPKLIPLAN-LLVNTTPIGMYPQVDESPLSAEDMANLPSGA 234
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+ +D +Y P+ T+ LK AE GAI + G+EM ++Q ++ +E P MR+
Sbjct: 235 IAYDLIYIPKPTKFLKLAETQGAIAIDGLEMLVQQGAAALKIWLQQETVPVAEMRQ 290
>gi|383318782|ref|YP_005379623.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
gi|379320152|gb|AFC99104.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
Length = 268
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 138/277 (49%), Gaps = 25/277 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 232
++G+I P+ HS P +HN F+ + + Y V L + + + F G +V
Sbjct: 4 MYGVIGDPIAHSLSPAMHNAAFKALGMDCYYGAFHVKGRYLHEAVNGARALGFGGLNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+KEAV++F E A+ I A NTI R + YNTD +I ++ED+
Sbjct: 64 PHKEAVIRFV-EADAAAREIGAANTIDFRTNKA----YNTDAPGAIASLEDS-------- 110
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
G + GR ++ GAGGA RA+ +G GA V I + ++A LA+ +
Sbjct: 111 -----GVKVKGRSVLVLGAGGAARAVTYGLLKAGATVTIANRTAQKAADLAAYMREYGEV 165
Query: 353 FEDILNFQPEKGAI---LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
F ++ EK +I + N T +GM D V+ + L D Q VFD VY P +TRLLK
Sbjct: 166 FGTGMDNLREKVSISDIIVNTTTVGM--GQDETLVTADMLSDRQTVFDLVYRPVETRLLK 223
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+A AGA + G+ M +RQ F ++TG + P + M
Sbjct: 224 EARLAGARAIDGITMLVRQGALSFEIWTGVKPPIDVM 260
>gi|422806705|ref|ZP_16855136.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
gi|324112516|gb|EGC06493.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
Length = 287
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDSSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE +G ++G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSIL 286
>gi|430822290|ref|ZP_19440869.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430864786|ref|ZP_19480611.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|431743724|ref|ZP_19532600.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
gi|430443348|gb|ELA53333.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430553567|gb|ELA93253.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|430606513|gb|ELB43864.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHEDL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|312143784|ref|YP_003995230.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
gi|311904435|gb|ADQ14876.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
Length = 297
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 40/292 (13%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFA 226
N +TK++GL+ K + HS P LHN FR ++ N IY+ + + L+ + + + +F
Sbjct: 7 NNETKLYGLLGKTLSHSISPSLHNTGFRDLDINAIYLMLECKEKELLEDYIQSLKNLNFG 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G++V PYKE ++ + + LA+ AVNT++ R G+L GYNTD IE+A
Sbjct: 67 GWNVTIPYKEDIIPYLNGFSSLARDAGAVNTVLNR--RGRLTGYNTDVIGFQRQIEEA-- 122
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLAS- 344
G + + V+ GAGGA RA +A + A V I + E A L
Sbjct: 123 -----------GFVVKDKKAVVIGAGGAARAVIAALIQLNLAEVTIINRTLENAAELVEL 171
Query: 345 ------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNT--DRVPVSEETLR 390
+ + EDI N ++ N TP+GM+ N ++ ++ E +
Sbjct: 172 FKEKESKTEFSYAALKESEYKEDIKN-----ADLIINTTPIGMYSNKMEKKLVINPEYIN 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+ Q V D +Y P KT LLK+AE GA I +G+ + QA F L+T KE P
Sbjct: 227 ENQFVLDLIYNPLKTELLKEAEKKGAQIGNGLPTLIYQAEAAFKLWT-KEMP 277
>gi|83814489|ref|YP_446381.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294508318|ref|YP_003572376.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
gi|123528180|sp|Q2S0A0.1|AROE_SALRD RecName: Full=Shikimate dehydrogenase
gi|83755883|gb|ABC43996.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294344646|emb|CBH25424.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
Length = 285
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 32/290 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
++A T++ L+ PV HS P +HN FR + N YV P+ + L + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAV+ DEV A+A+ AVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLE---- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDFERAKSLAS 344
ERG G L G ++ GAGGA RA+ +G S R R+ I ++A+ LA+
Sbjct: 117 ERG--------GDALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAA 168
Query: 345 DVM-----GAAR--PFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 393
D+ GA R FE+ L+ + + ++ NATPLGM P+ R D+
Sbjct: 169 DLAAHDPDGALRVSSFEEAALSVRTSR--LVVNATPLGMAPDR-RGQTPWPNPVDFTADH 225
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 443
+V+D VYTP +TRLL++A A GA + G++M + QA + +T + P+
Sbjct: 226 VVYDLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWTDRGMPQ 275
>gi|424814987|ref|ZP_18240138.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
gi|325496007|gb|EGC93866.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
Length = 287
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE +G V+G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTVNGLGMMLWQGAAAFEIWTGKEMPVDYIKSIL 286
>gi|335029401|ref|ZP_08522908.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
gi|334268698|gb|EGL87130.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 148/308 (48%), Gaps = 49/308 (15%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNRAFEATNTNGVYLAWEVEGTDLAETVANIRRYQMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+G+ SF ++G+ VL GAGGA +A+ A G ++V +F + S
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILVQAILDGVSQVSVF---------VRSA 156
Query: 346 VMGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSE 386
MG +P+ ED Q K +L NAT +GM + +P S
Sbjct: 157 SMGKTQPYLEKLQHETGFRVDLFALEDAQELQENIRKAELLVNATSVGMDGASQPIPTSI 216
Query: 387 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
L + LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P + +
Sbjct: 217 -VLPEKLLVADVIYQPFETPFLKWARSQGNHAVNGLGMLLYQAAEAFQLWTGKEMPTDQI 275
Query: 447 REIVLAKF 454
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|227551431|ref|ZP_03981480.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257895956|ref|ZP_05675609.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
gi|227179440|gb|EEI60412.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257832521|gb|EEV58942.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM D+ P+ + + +L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y P +TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPSETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|336437054|ref|ZP_08616763.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006188|gb|EGN36224.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 288
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GL+ PV HS P++HN F+ + + Y+ V D L+ +
Sbjct: 3 ERITGKTRLTGLLGSPVTHSISPMMHNEAFKELGLDYAYLAFDVGTDKLEAAVEGLKVLN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + CD + P A+ I AVNT++ DG L GY TD + +++DA
Sbjct: 63 VRGFNVTMPDKNLMCSLCDHLSPAAEIIGAVNTVVN--EDGVLTGYTTDGIGYMMSVKDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAK 340
G + G+ + GAGGAG ++ A G A + +F+ FERA+
Sbjct: 121 -------------GYDVIGKKMTIFGAGGAGTSILVQAALDGVAEITVFNRRTPFFERAE 167
Query: 341 S----LASDVMGAARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
L R + E IL + + A+L NAT LGM PN + + + + L
Sbjct: 168 RIIGRLKEQTGCRIRLYDYDDESILRREIGESALLTNATSLGMAPNVETCILKDASMLHP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V D +Y P++TRLL+ AG +G+ M L Q F ++TG++ P E ++E
Sbjct: 228 GVVVSDMIYNPKETRLLRMVREAGCRTFNGMYMLLYQGAEAFRIWTGQQMPVEHIKE 284
>gi|294618196|ref|ZP_06697782.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|431499460|ref|ZP_19515039.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|431618722|ref|ZP_19522767.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
gi|291595544|gb|EFF26851.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|430588096|gb|ELB26301.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|430603872|gb|ELB41383.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELLTKEKMP 275
>gi|407473822|ref|YP_006788222.1| shikimate 5-dehydrogenase [Clostridium acidurici 9a]
gi|407050330|gb|AFS78375.1| shikimate 5-dehydrogenase AroE [Clostridium acidurici 9a]
Length = 282
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+A+T ++ LI P+ S P +HN +F+ N Y+ + V +DL+ +
Sbjct: 3 IDANTNLYCLIGHPISKSLSPEIHNYSFKKNGINAKYIALDVSTEDLEDAVKGIKALGIR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K ++K+ DE+ A+ + AVNT+ + +GKLIGYNTD + ++D
Sbjct: 63 GCNVTIPHKIDIIKYLDEIDEEAELLGAVNTV--KNENGKLIGYNTDGRGFVQVLKDKNI 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS- 344
E KN + GAGGA RA++ G ++ IF+ E+AK +
Sbjct: 121 EIKNKN-------------IAVLGAGGAARAISIILAKEGINQITIFNRTIEKAKIIIDE 167
Query: 345 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
DV G E + IL N T +GM+PN D +PV ++ D
Sbjct: 168 IKEKFPDVTGMYSSLES-NKYDLSSVDILINCTSIGMYPNIDEMPVDPSIFPRQTVICDI 226
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
VY P KT+LL+ +E G I + G++M + Q I ++ K K+ + E + K
Sbjct: 227 VYKPLKTKLLEMSEKNGNIAIGGLDMLIYQGILSEEIWLQKNIDKDLVIEWIKEKI 282
>gi|145577929|gb|ABP82683.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
pulsiensis]
Length = 238
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 129/250 (51%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L GAGGA RA+ F G + + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATK 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|291616254|ref|YP_003518996.1| AroE [Pantoea ananatis LMG 20103]
gi|378768567|ref|YP_005197040.1| shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
gi|386014647|ref|YP_005932924.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|291151284|gb|ADD75868.1| AroE [Pantoea ananatis LMG 20103]
gi|327392706|dbj|BAK10128.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|365188053|emb|CCF11003.1| Shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
Length = 287
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V ++ D++ P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 344
GY A G + G+ + GAGGA A+ A G + + ++ + A
Sbjct: 110 --GTGYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAISVFNQRDKFFANAQ 167
Query: 345 DVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + R D L + IL NAT +GM P ++ + +E+ LR
Sbjct: 168 ETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G I++G+ M L Q F ++TGK P + ++ I+
Sbjct: 228 ELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKNIL 286
>gi|431071468|ref|ZP_19494439.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|431104340|ref|ZP_19497064.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|431582328|ref|ZP_19520277.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|431740200|ref|ZP_19529117.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
gi|430567101|gb|ELB06187.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|430569928|gb|ELB08907.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|430594218|gb|ELB32188.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|430603736|gb|ELB41249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM D+ P+ + + L
Sbjct: 167 FEQLSYRTSCKVKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+ ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWAKEKMP 275
>gi|339010605|ref|ZP_08643175.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
gi|338772760|gb|EGP32293.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
Length = 277
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 232
+ GL +PVGHS P++HN F Y V+D +K+ + G +V
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K AV+ + D++ PLA+ I AVNTI+ DG LIGYNTD + ++ ++E G
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRSL---LEETGID- 114
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAAR 351
L + L GAGGA RA+A RG + + I + ERA+ LA +G+
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLAM-ALGSQI 165
Query: 352 PFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
P + +F + AI L N T +GM+P+ +PV + LR +V D +Y P +T+
Sbjct: 166 PIR-VYSFAQAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQ 224
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL+ A+ GA SG+ MF+ Q + L+TG+ AP + MREIVL
Sbjct: 225 LLQCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|110729183|gb|ABG88186.1| CPC-1 [Cucumis sativus]
Length = 130
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 187 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 246
K P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV K+CDEV
Sbjct: 1 KLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDEVD 60
Query: 247 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
P+A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + + S LAG++
Sbjct: 61 PVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVSSRLAGKL 117
>gi|78043133|ref|YP_359479.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576787|sp|Q3AEF5.1|AROE_CARHZ RecName: Full=Shikimate dehydrogenase
gi|77995248|gb|ABB14147.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 280
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 28/292 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN +TK+ G+I P+ H+ P +HN F+ +N N +Y+P+ V + L + + +F
Sbjct: 3 INGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE V F DEV A+ I AVNTI+ G+LIGYNTD + ++++
Sbjct: 63 GINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVH--DRGRLIGYNTDAPGFLLSLKENDV 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + G+ +L GAGGA RA+A+ + GA ++I + ++AK LA D
Sbjct: 121 E-------------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDF 167
Query: 347 MGAARPFEDI------LNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDA 398
G + E + ++ P A+ N PLGMHP +++P + T D+ + +D
Sbjct: 168 QGVGKISEILELGDKPISLAPYHMAV--NTLPLGMHPYENQMPAVDFTGVTSDF-VAYDL 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P +T+ LK ++ GA ++G+ M L Q + F +TG P + M++ +
Sbjct: 225 IYNPAETKFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKKAI 276
>gi|425058431|ref|ZP_18461812.1| shikimate dehydrogenase [Enterococcus faecium 504]
gi|403038372|gb|EJY49588.1| shikimate dehydrogenase [Enterococcus faecium 504]
Length = 284
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVAYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|225620102|ref|YP_002721359.1| shikimate 5-dehydrogenase [Brachyspira hyodysenteriae WA1]
gi|225214921|gb|ACN83655.1| shikimate 5-dehydrogenase [Brachyspira hyodysenteriae WA1]
Length = 283
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 148/298 (49%), Gaps = 35/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
INA+T + GL + P HS PI+HN F +N N Y+ VD +LK+ ++ + +
Sbjct: 3 INAETILTGLFASPSKHSISPIMHNEAFNKLNLNYTYLAFEVDKNNLKEAVNSIKTLNMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-- 284
G ++ P K+ V+K+ D++ A+ +VNTI+ +G LIGY+TD E I ++E+
Sbjct: 63 GVNLSMPNKKEVIKYLDKISEAAELSQSVNTIVN--DNGILIGYSTDGEGFIKSLEEENV 120
Query: 285 -IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK 340
IK++ + G GGA A+ A G + + +F D ++ K
Sbjct: 121 FIKDKN----------------ITILGTGGASIAIISQAALYGVKEIYVFKRDTNWNEQK 164
Query: 341 SLASDVMGAAR------PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
+ ++ ED IL + E +L NAT +GM + + + R+
Sbjct: 165 KIIDNIASKTNCNITLHSLEDKNILKSKIENSYVLINATSVGMKEDVSLIE-DKSFFRND 223
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T K+ P E+++ I+
Sbjct: 224 LVVSDCIYHPAKTKLLKIAEEEGCKIINGMGMLLYQGALAFELWTNKKMPVEYIKNII 281
>gi|383774973|ref|YP_005454042.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. S23321]
gi|381363100|dbj|BAL79930.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. S23321]
Length = 302
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 139/291 (47%), Gaps = 48/291 (16%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIY------------VPMFVDDLKKFFSTYSSPD 224
GLI P+ HS P +H + Y + M ++ +++
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRCHYQLIEVAGADAAGLAMMLEGVRRL-------G 67
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
FAG +V FPYKEAV+ D + P A A+ AVNT++ + DG+L G+NTD
Sbjct: 68 FAGVNVTFPYKEAVVPLLDALAPRAAAMGAVNTVVVK--DGRLTGHNTDTT--------- 116
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLA 343
G+ A +P +G + GAGG G+A+AF S + IFD + RA +L
Sbjct: 117 ----GFARAVAPLLAP-SGNAVAVIGAGGVGKAIAFALASLDVTDIRIFDSELARAATLV 171
Query: 344 SDVM--GAAR---PFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFD 397
S + G AR ED L+ GA L N TP+GM PN D PV+ L D V D
Sbjct: 172 SLLAPRGGARVAASVEDALH-----GATGLVNGTPVGMLPNRD-TPVAVTLLHDKLWVTD 225
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
AVY+P T LL A+ GA I++G E+ + QA F LFTG E M E
Sbjct: 226 AVYSPLITPLLAAAQERGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|145577939|gb|ABP82688.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A+ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALRSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + + + ++AK L + M L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|21227376|ref|NP_633298.1| shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452209858|ref|YP_007489972.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
gi|24211496|sp|Q8PXE6.1|AROE_METMA RecName: Full=Shikimate dehydrogenase
gi|20905736|gb|AAM30970.1| Shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452099760|gb|AGF96700.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
Length = 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ PVGHS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED-AIKER 288
P KE +K D V P LA+ I AVNT++ G + GYNTD + A+ D ++ R
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVF-GKKGDIQGYNTDGPGAKQALLDTGVEIR 120
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G + A G F LA + GA + + + ERA LA ++
Sbjct: 121 GSRMVVAGAGGAARAVAFQLA--------------ADGADITVINRTEERAVGLAREISA 166
Query: 349 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A P +++L +L N T LGMHPNTD V+ E L VFD
Sbjct: 167 ADLPGKIRGTGLSGLKELL----RDADVLINTTTLGMHPNTDATIVTAEELHSGLTVFDI 222
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VY P +TRLL++A +GA +SGV M + Q F L+TG E P E M++ VL
Sbjct: 223 VYNPLETRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGVEPPLELMKKTVL 275
>gi|294616615|ref|ZP_06696391.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430849862|ref|ZP_19467629.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
gi|291590565|gb|EFF22298.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430536557|gb|ELA76924.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
Length = 284
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + ++ NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLIVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|218547527|ref|YP_002381318.1| shikimate 5-dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218355068|emb|CAQ87676.1| putative Quinate/shikimate dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 287
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE +G ++G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSIL 286
>gi|428301034|ref|YP_007139340.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
gi|428237578|gb|AFZ03368.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
Length = 306
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 144/301 (47%), Gaps = 32/301 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I PVGHS P++HN + + +Y+P + +L+ + +++
Sbjct: 15 ITGTTKLLGVIGDPVGHSLSPLMHNAAINTLGLDYVYLPFPIKPHNLRDAIACFAAIGVL 74
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ F EV LA+ + AVNT+ + D +G NTD I+ ++
Sbjct: 75 GFSVTIPHKQAIIPFLSEVSDLAKVVGAVNTVFYQ--DHHWVGTNTDVTGFISPLK---- 128
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDID----FERA 339
++ + V+ G GGA RA+ G G VV D++ F +
Sbjct: 129 --------TTYNRDWSQTSVVILGNGGAARAIVVGCTELGCGEIHVVGRDVEKIALFRDS 180
Query: 340 KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ------ 393
++ V D+L + +L N TP+GMHP +R P++ E + +
Sbjct: 181 WQNSTLVGNLQVHHWDMLPKLLPQANLLVNTTPVGMHPQIERSPLTIEEFKQFAVASSIN 240
Query: 394 --LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMREIV 450
+ +D Y P T+ L+ A + GA ++G+EM ++Q ++ ++ P + MR+ +
Sbjct: 241 PPIAYDLTYNPSPTKFLQQAASVGATTINGLEMLVQQGAAALKIWLQRDTVPVDVMRQTL 300
Query: 451 L 451
L
Sbjct: 301 L 301
>gi|373494926|ref|ZP_09585521.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
gi|371967062|gb|EHO84539.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
Length = 291
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 30/290 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
+++I+ +K++ L + P HS P++ N F +N N +Y+ V D + + +
Sbjct: 1 MKNIDGKSKLYALFASPCEHSISPLIQNSAFEKMNINAVYMAFDVGTDKIADAVLSMRTL 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
AG ++ P K AV+K+ DE+ A+ AVNT++ R DGKL GYNTD S AIED
Sbjct: 61 GIAGANISMPNKTAVIKYLDEISDDARFCNAVNTVVNR--DGKLYGYNTDIFGSEKAIED 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIF----DIDFER 338
G + L G GGAG+A+ + AK+ +V +F I+F +
Sbjct: 119 -------------LGINITNSKVCLLGLGGAGQAVLYTLAKNNVNKVCVFVRQNSIEFRK 165
Query: 339 A------KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRD 391
+ + + DV A + +L+ + +L N T LGM + D+ P+ +E L +
Sbjct: 166 SYVDKIRSNFSIDVDIYAIEEQVLLSKHINEADLLINTTKLGMAQDIDKSPLDDEFKLPE 225
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKE 440
+ V D +Y P +TRLL A+A G I S G+ M + Q + F FTGK+
Sbjct: 226 HICVLDLIYNPGETRLLAKAKADGCIRYSNGLNMLVYQGVKSFEHFTGKK 275
>gi|330444737|ref|YP_004377724.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
gi|328807847|gb|AEB42020.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
Length = 480
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 176/409 (43%), Gaps = 38/409 (9%)
Query: 32 LGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADI 91
L Y+D +++ + L K S+ + L T + ED ++ +M +T A
Sbjct: 81 LSPTYLDVDIQFPQDALRKIRLSYPD-----IKIILSHHTETYEDPHHIYHKMHSTPAHY 135
Query: 92 IKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY--GSLKGT 149
K+V + R A +GE L S++LSP A+ Y G
Sbjct: 136 YKIVTYSETPLQTLRFVHAARSLPPQATALCLGEHSLASRVLSPLMGNAMNYAAGRHASP 195
Query: 150 PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--P 207
G P ++ L Y ++++ + +++ LI PV S I HN F + Y+ P
Sbjct: 196 AAPGQPHLDDLL-AYNYKNLSQEAEIYALIGNPVDRSPSHITHNKFFSKLLIKASYIKIP 254
Query: 208 MFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKL 267
+ + L +FF + F G SV P K VM + D + P AQ AVNTI+ + L
Sbjct: 255 LSPEQLTEFFIILRTLPFRGLSVTMPLKVPVMDYMDILDPSAQLCGAVNTILFH--EDVL 312
Query: 268 IGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 327
GYNTD + + + + G A + + + GAGGA R+LA GA
Sbjct: 313 YGYNTDGQGAFNLL--------VRKGVA-----IKNKHVAILGAGGAARSLAVTLAHHGA 359
Query: 328 RVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE 387
+ IF+ F+ A+SLA G A P +D+ F + +L N P + + P+
Sbjct: 360 YIHIFNRTFQNAESLAKLCNGTAHPLKDLRGFASD---LLINTLPPEIGFPWEFPPI--- 413
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
+ D P+ T L A+ G + G EMF+ QA+ QF+L+
Sbjct: 414 -------ILDINTFPKNTPYLLKAQQLGVRVFHGYEMFIEQALLQFSLW 455
>gi|386052745|ref|YP_005970303.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346645396|gb|AEO38021.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 291
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD--IDF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + S A+ F+ D L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDIEDHDQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 451 L 451
Sbjct: 291 F 291
>gi|422414971|ref|ZP_16491928.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313624974|gb|EFR94873.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 301
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINTKTNCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 451 LAKF 454
K
Sbjct: 291 XXKL 294
>gi|16332159|ref|NP_442887.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|383323902|ref|YP_005384756.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327071|ref|YP_005387925.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383492955|ref|YP_005410632.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384438223|ref|YP_005652948.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451816311|ref|YP_007452763.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|9087124|sp|P74591.1|AROE_SYNY3 RecName: Full=Shikimate dehydrogenase
gi|1653788|dbj|BAA18699.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|339275256|dbj|BAK51743.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|359273222|dbj|BAL30741.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276392|dbj|BAL33910.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359279562|dbj|BAL37079.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407960196|dbj|BAM53436.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|451782280|gb|AGF53249.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 290
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 31/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G+I PVGHS P++HN + + + YV P+ +DL + +
Sbjct: 4 ITGKTKLLGVIGYPVGHSLSPVMHNAALQAMASDYAYVAFPIAPEDLTIAIAGLGASGVQ 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAI 285
G SV P+K+ VM ++ A+ + AVNT+ R DG G NTD E
Sbjct: 64 GLSVTIPHKQVVMPLLTQITETARQVGAVNTLWR---DGHGWQGTNTDVE---------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
G+ +GR V+ G GGA RA+ G G +++ E+ A+
Sbjct: 111 ---GFLAPLLELKQDWSGRTAVILGYGGAARAVVVGLTQLGCPEIIVVGRSQEKLAQFAN 167
Query: 345 DVMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 394
P+E + P K ++L N+TP+GM P+ + P+ + E L +
Sbjct: 168 SWTDPKIKQALQVLPWEALSTVIP-KASLLINSTPVGMAPHPKQSPLDQSLVEKLPPTAI 226
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+D +YTPR TR L+ A+ G + + G EM ++Q ++ +E P + MR+ +L
Sbjct: 227 AYDLIYTPRPTRFLQHAQERGLVTIDGAEMLVQQGAAALKIWLQQEVPVDVMRQALL 283
>gi|332799771|ref|YP_004461270.1| shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|332697506|gb|AEE91963.1| Shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 290
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 146/285 (51%), Gaps = 31/285 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDC------------ 112
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + L R+F+ GAGG G+A+A +G ++ + + ++A++L
Sbjct: 113 -TGFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVKKLFLTNRSIDKAENLRKR 170
Query: 346 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPN---TDRVPVSEETLRDYQLV 395
+ ++ +I+ + ++ ++ N T LGM+ N D VP E +R L+
Sbjct: 171 LEHLSKTEVEIIPWDKKSWNEGIKESDLIINCTSLGMYNNGNLADIVP--WELVRSNTLI 228
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
++ +Y PR+T L+ A + ++ G+ + + QA + ++TG E
Sbjct: 229 YETIYEPRETTLISKARSLNLEVIEGINLLVYQAAAAYKIWTGLE 273
>gi|228478338|ref|ZP_04062946.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
gi|228250017|gb|EEK09287.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
Length = 285
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ A D FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDFEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|422411890|ref|ZP_16488849.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
gi|313620437|gb|EFR91825.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 308
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 13 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 72
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 73 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 130
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 131 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 177
Query: 337 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 178 EKTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 237
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 238 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 297
Query: 451 LAKF 454
K
Sbjct: 298 XXKL 301
>gi|311069169|ref|YP_003974092.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|419820181|ref|ZP_14343794.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
gi|310869686|gb|ADP33161.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|388475693|gb|EIM12403.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
Length = 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 28/291 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P +HN + + +G Y V D+LK + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDLGLDGHYHAFQVENDNLKDAVKGIKALGMIGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M+ D + A+ + AVNT+ R L+GYNTD E + ++ + +
Sbjct: 63 VPHKVAIMEHLDHIDESAKVLGAVNTV--RTEGDMLVGYNTDGEGFVKSLRKILDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
P+ ++ GAGGA RA+ + R I + E+A+ L + ++
Sbjct: 117 --------PVQDLSILMIGAGGAARAIFTTIVRENPKRFDICNRTLEKAEQL----IQSS 164
Query: 351 RPFED--ILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
F++ +L + E+ ++ + T +GM+P+ D VP+S + + +V D VY P
Sbjct: 165 PSFQNKQVLTIKEAEENLERYDVIIHTTSIGMYPDIDAVPISLQRAANRAIVCDIVYNPI 224
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK AE G + GV MF+ QA F L+TG+E + MR IV AK
Sbjct: 225 RTALLKQAEQKGLRTLDGVGMFVEQAALSFQLWTGQEPDIDKMRAIVEAKL 275
>gi|145577899|gb|ABP82668.1| shikimate 5-dehydrogenase [Bacillus cereus]
Length = 238
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GM P+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMRPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|75761259|ref|ZP_00741241.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491241|gb|EAO54475.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 229
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 22/242 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T
Sbjct: 169 NSVALSLEKATEEQGNYD-IIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETN 227
Query: 407 LL 408
+
Sbjct: 228 FM 229
>gi|367477867|ref|ZP_09477203.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
gi|365269803|emb|CCD89671.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
Length = 293
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V LK FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLKMLLEGVRQLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD T E A+ +
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDT----TGFERAVAPLVAQ 128
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
+G + L GAGG G+A+AF + G A + I+D + R + L S +
Sbjct: 129 SGRG---------VVALIGAGGVGKAIAFALANLGVAGLRIYDTERTRVEKLTSSLPAG- 178
Query: 351 RPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
E ++ E+ A + N TP+GM PN PV + LR V DAVY+P T
Sbjct: 179 --MEAVIAESVEEALQGVAGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTP 235
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
LLK A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 236 LLKAAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|45358499|ref|NP_988056.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
gi|74554623|sp|Q6LYQ2.1|AROE_METMP RecName: Full=Shikimate dehydrogenase
gi|44921257|emb|CAF30492.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
Length = 278
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 156/294 (53%), Gaps = 25/294 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN+ TK+ GLI PV HS PI+HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K G + ++ G+GGA RA++F ++ + I + + E+A++L+ ++
Sbjct: 117 ----KTGILIN------KNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 347 MGAARPFEDILNF-----QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 400
+ E+ LN+ E I+ N TP+GM+P+T+ PV ++ +V D +Y
Sbjct: 166 SRKLKK-ENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIY 224
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P + LK+A+ GA ++G+ M + Q F ++TG + M++ +++K
Sbjct: 225 NPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGIKPDIFVMKKSIISKI 278
>gi|398311509|ref|ZP_10514983.1| shikimate 5-dehydrogenase [Bacillus mojavensis RO-H-1]
Length = 278
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 24/289 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++G+I P+ HS P +HN + + +G Y V D L+ + G +V
Sbjct: 3 KLYGVIGNPIAHSMSPDIHNAALKDLGLDGHYHAFKVEEDSLEDAVKGIRALGLQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDHLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVRSLMRILDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
P++ F++ GAGGA RA+ + + I + E+AK L +D +
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTIVRDNPEKFDICNRTIEKAKQL-TDSAPSF 167
Query: 351 RPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
R E +L+ + E+ ++ + T +GM+PN + +P+S + +V D VY P +T
Sbjct: 168 RNVE-VLSIKEAEERLEQYDVIIHTTSVGMYPNVEDIPLSLQRAASSAVVCDIVYNPIQT 226
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LLK+A+ G + GV MF+ QA F L+TG E E MR IV+ K
Sbjct: 227 SLLKEAKQKGLKTLDGVGMFVEQAALSFRLWTGHEPDVEKMRSIVVGKL 275
>gi|365882753|ref|ZP_09421946.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 375]
gi|365288883|emb|CCD94477.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 375]
Length = 293
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 133/277 (48%), Gaps = 23/277 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGLRCHYQLIEVAGADRAGLSSLLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV++ DE+ P A+A+ AVNT++ R G+LIG+NTD G++
Sbjct: 75 YPYKEAVVELLDELAPKAEAMGAVNTVVVR--GGRLIGHNTDTT-------------GFE 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDV-MGA 349
A + + L GAGG G+A+AF + G + IFD + RA+ LA + G
Sbjct: 120 RAVAPLVNQTGRGVVALIGAGGVGKAIAFALANLGVVGLRIFDTERARAERLAQLLSTGT 179
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
D + + + N TP+GM PN PV + LR V DAVY+P T LLK
Sbjct: 180 KVTVVDSVEAALQDAVGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTPLLK 238
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
A+A GA ++ G E+ + QA F LFTG A E M
Sbjct: 239 AAKARGAQVLLGRELAIYQAADAFELFTGLAASTEAM 275
>gi|289433772|ref|YP_003463644.1| hypothetical protein lse_0405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170016|emb|CBH26556.1| aroE-1 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPF----EDILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + S A+ F E+ L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDIEDEERLRKEISESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 451 L 451
Sbjct: 291 F 291
>gi|421452028|ref|ZP_15901389.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
gi|400182459|gb|EJO16721.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
Length = 285
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P Q I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAVQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRHQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|385809656|ref|YP_005846052.1| shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
gi|383801704|gb|AFH48784.1| Shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
Length = 290
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 36/304 (11%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ ++ T++ GL+ P+ H+ P +HN F + IY+P V +LK +
Sbjct: 3 DSMHLKTQLVGLVGHPIKHTYSPFIHNVAFELTGLDYIYLPFNVIPSNLKSAIKGLVALG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
+ GF+V P+K V +F +V A + A+NT++ +GK+ GYNTD + ++
Sbjct: 63 YKGFNVTIPHKVKVKEFMSKVSEEASFVGAINTVLIE--EGKMFGYNTDVAGVLESLYAY 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAKSL 342
KE +A V+ GAGG+ RA+ + R +R+ + + +RA++L
Sbjct: 121 RKE-------------IADNECVVIGAGGSARAVIYTLIKHFRPSRIHLVNRTEQRAETL 167
Query: 343 A----------SDVMGAARP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
S + P +DI+ + ++ NAT +GMHP+ D ++++ L
Sbjct: 168 RQFFKTKIKFDSFTVNELIPPDIKDII----KNSVLIVNATSVGMHPDEDDAVLTQKDLF 223
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
Q+VFD VY P +T+LLK AE+AGA V G++M + QA F ++TG++ P E + +
Sbjct: 224 SKEQIVFDLVYNPAQTKLLKLAESAGAKTVDGIKMLVNQAAKSFEIWTGEKMPVEQVEKA 283
Query: 450 VLAK 453
+L K
Sbjct: 284 LLLK 287
>gi|386080684|ref|YP_005994209.1| shikimate 5-dehydrogenase [Pantoea ananatis PA13]
gi|354989865|gb|AER33989.1| shikimate 5-dehydrogenase AroE [Pantoea ananatis PA13]
Length = 287
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V ++ D + P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDTLSPAAQLVGAVNTVVN--DNGVLTGHITD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 344
GY A G + G+ + GAGGA A+ A G + + ++ + A
Sbjct: 110 --GTGYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAISVFNQRDKFFANAQ 167
Query: 345 DVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + R D L + IL NAT +GM P ++ + +E+ LR
Sbjct: 168 ETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G I++G+ M L Q F ++TGK P + ++ I+
Sbjct: 228 ELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKNIL 286
>gi|421873988|ref|ZP_16305597.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
gi|372457099|emb|CCF15146.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
Length = 277
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 24/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 232
+ GL +PVGHS P++HN F Y V+D +K+ + G +V
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K AV+ + D++ PLA+ I AVNTI+ DG LIGYNTD + ++ ++E G
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRSL---LEETGID- 114
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAAR 351
L + L GAGGA RA+A RG + + I + ERA+ LA +G+
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLAL-ALGSQI 165
Query: 352 PFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
P + +F + AI L N T +GM+P+ +PV + LR +V D +Y P +T+
Sbjct: 166 PIR-VYSFAHAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQ 224
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL+ A+ GA SG+ MF+ Q + L+TG+ AP + MREIVL
Sbjct: 225 LLQCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|303249289|ref|ZP_07335521.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
gi|302489295|gb|EFL49252.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
Length = 270
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 136/282 (48%), Gaps = 24/282 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 230
++VFG+I P+GH+ P++HN F+ Y P ++L F G SV
Sbjct: 2 SRVFGIIGHPLGHTLSPLVHNWGFKRFGIKARYEAWPTLPEELGAFMVRLRETPVEGLSV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K VM + D V L +++ AVNT+ R DG+L NTD E + RG
Sbjct: 62 TIPHKTPVMAYVDAVTDLGRSVGAVNTLYWR--DGELWAENTDVEGFCRPL----VLRG- 114
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGA 349
+A R ++ G GG RA G G R+ + E+A LA +
Sbjct: 115 ----------IAPRAALILGCGGVARAAVAGLVRLGVERLAVTGRSAEKAAVLAGEFGLE 164
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKTRLL 408
++ +F +L NATP+GM + + P E L +V+D VYTP T
Sbjct: 165 RVDWDRRADF---PAGLLVNATPMGMTGRLEGLSPYPAEALGPDHVVYDLVYTPDPTHFG 221
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
DA AAG ++VSG+EMFL QA+ QF L+TG+ P + +R ++
Sbjct: 222 ADALAAGGLVVSGMEMFLYQAVEQFRLWTGRILPDDELRTLL 263
>gi|84489456|ref|YP_447688.1| hypothetical protein Msp_0647 [Methanosphaera stadtmanae DSM 3091]
gi|121724206|sp|Q2NGK8.1|AROE_METST RecName: Full=Shikimate dehydrogenase
gi|84372775|gb|ABC57045.1| AroE [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I T + G+I P+ HS P +HN ++ +N + YVP V+ +LK ++ + +
Sbjct: 2 ITGKTLITGVIGHPIEHSFSPPMHNNAYKLMNMDYKYVPFHVEVENLKHVITSAKTLNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K ++ + DE+ A+ I AVNTI + DG GYNTD +I +IE
Sbjct: 62 GLNVTIPHKTTIIPYLDEIDETAEKIGAVNTINFK--DGIAKGYNTDGIGAIVSIEKY-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
+ L + ++ GAGGA +A+ F ++ ++++ + + A+ L ++
Sbjct: 118 ------------TSLKDKNIMIIGAGGASKAITFTLLNKNINQLIVANRSKDNAQKLITN 165
Query: 346 VMGAARPFEDI--LNFQPEKGAI-----LANATPLGMHPNTDRV--PVSEETLRDYQLVF 396
+ FE+I +N + I + N TP+GM+P D V P+ + + V
Sbjct: 166 LKNQTN-FENIDFINIKKTDNVIDDVDIIINTTPIGMYPK-DEVAPPIKTDKISSKHTVM 223
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
D +Y P +T+LLK ++ GA + G M + Q I F +FTGK
Sbjct: 224 DIIYNPLETQLLKQSKKQGATTIPGTHMLINQGIKAFEIFTGK 266
>gi|217965421|ref|YP_002351099.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386007213|ref|YP_005925491.1| aroE-1 [Listeria monocytogenes L99]
gi|386025803|ref|YP_005946579.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217334691|gb|ACK40485.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|307570023|emb|CAR83202.1| aroE-1 [Listeria monocytogenes L99]
gi|336022384|gb|AEH91521.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G+ + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GNDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|311031592|ref|ZP_07709682.1| shikimate 5-dehydrogenase [Bacillus sp. m3-13]
Length = 278
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 24/283 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I P+ HS P++HN F + Y V D L+ + GF+V
Sbjct: 4 LYGVIGSPIAHSMSPLIHNDAFLQNGMDAHYHAFHVEPDQLETAVAGMRVLGINGFNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+KEA++ D V A I AVNT++ R DG+LIGYNTD + A+++ +K
Sbjct: 64 PHKEAIIPLLDSVDDAALQIGAVNTVVNR--DGELIGYNTDGRGFVEALKEVVK------ 115
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAAR 351
L + ++ GAGGA RA+ + A +G ++ I + +A+ L + R
Sbjct: 116 --------LKDKHVLIIGAGGAARAILYTLALEKGVQIDICNRTVSKAEDLIRE-FSLER 166
Query: 352 PFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
I Q ++ ++ T +GM+P + +P+ ++++ + + D +Y P +T+L
Sbjct: 167 ITRSITVDQAAREIQRYDVVVQTTSVGMYPKINDIPLPLKSIKQHAVFTDIIYNPIETKL 226
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
L++A+A GAI +G+ MF QA F ++TGK M+++V
Sbjct: 227 LQEAKAIGAITQNGIHMFAYQAALAFEIWTGKFPDTVRMKKLV 269
>gi|332298817|ref|YP_004440739.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
gi|332181920|gb|AEE17608.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
Length = 501
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 192/415 (46%), Gaps = 27/415 (6%)
Query: 36 YVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 95
Y+DFE ++ Q ++ TR I S + D E P ++ +++M+ TG +I KL
Sbjct: 103 YIDFEEDF--HVPSLQDAALAFETRIIRSAH-DMENPVY-NICERLAKMRTTGFEIPKLA 158
Query: 96 FSVNDITEIARIF-QLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTP 150
+ ++++ +F + S I ++G GL S++L+ + + L Y S K G
Sbjct: 159 CMPHSLSDVTHMFAEAASLADSEHILCAMGPLGLPSRILAGRLHSFLTYTSPKEPTGGMQ 218
Query: 151 VLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV 210
+G +L + Y I+A+TK++G+ P+ + P +HN +R N YVP+
Sbjct: 219 QIGHIDPVTLNEIYNFRAIDANTKLYGITGYPLAATDSPRIHNEGYRKHGMNAAYVPVRA 278
Query: 211 DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGY 270
+ + + G SV P+KE V+++ +V I A NTI+R SD GY
Sbjct: 279 ATVSEALEFAAETGIQGLSVTIPHKEKVLEYLPQVSAEVGEIDACNTIVRTESD--WFGY 336
Query: 271 NTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 330
NTD A+ D + + LA + G+GGA +A AF K +
Sbjct: 337 NTDAYGLSRAVCDFMNVKN-----------LAHCKVAIIGSGGAAKAAAFAVKQLRGKAC 385
Query: 331 IFDIDFERAKSLASDVMGAARPF-EDILNFQPEKGAILANATPLGM---HPNTDRV-PVS 385
IF+ +AK +A + P + + + ++ TP GM P T++ P+
Sbjct: 386 IFNRTVSKAKQIAENFNFKWAPLGPESADLLEKYSDLIIQTTPKGMGAAPPATEQNDPIF 445
Query: 386 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+ Y+ V+D VY P T ++ A+AAG + +G M QA QF LFTG E
Sbjct: 446 FYDFKGYEAVYDVVYVPEITPVMARAKAAGCKVSNGHTMLEYQAYKQFELFTGAE 500
>gi|315301589|ref|ZP_07872696.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313630036|gb|EFR98062.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 291
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPF----EDILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + S A+ F E+ L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDMEDEEQLRKEISESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T +E P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHREMPVDYIKEIL 290
Query: 451 L 451
Sbjct: 291 F 291
>gi|340399205|ref|YP_004728230.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
gi|338743198|emb|CCB93706.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
Length = 285
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|254829415|ref|ZP_05234102.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258601829|gb|EEW15154.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 291
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHKQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|254424583|ref|ZP_05038301.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
gi|196192072|gb|EDX87036.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
Length = 303
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 153/312 (49%), Gaps = 46/312 (14%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNG----IYVPMFV--DDLKKFFSTYSS 222
I T++ G+I P+ HS P++HN H+ G +Y+P V ++LK + +
Sbjct: 3 IKGTTQLLGVIGYPIKHSFSPLMHNAAIAHLRETGPADYVYLPFPVHPENLKDAIIGFKA 62
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
GF++ P+K+ ++ DEV +A+AI AVNT+ Y T + +
Sbjct: 63 IGLRGFNITIPHKQTIIPLLDEVSEVAKAIGAVNTV----------WYGTWNKG-----D 107
Query: 283 DAIKERGY---KNGTASFGSPLAG--------RMFVLAGAGGAGRALAFGAKSRGA-RVV 330
D+ +E G+ F SPL R VL G GGA RA+ G R+
Sbjct: 108 DSSQESGWCGTNTDAIGFLSPLQALKQDWTNTRAIVL-GNGGASRAVVAACHQLGCKRIS 166
Query: 331 IFDIDFER----AKSLASDVMGAAR----PFEDILNFQPEKGAILANATPLGMHPNTDRV 382
+ + E+ A+S A+ AAR +E++ + Q ++ ++ NATP+GMHPNTD
Sbjct: 167 VVGRNLEKLAWFAESWANSPDIAARLKVMTWEELPD-QLQRAGLVVNATPVGMHPNTDAS 225
Query: 383 PVSEETLR---DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
+S++ L + +D +YTPR T+ L+ A AAG V G+EM ++Q ++ +
Sbjct: 226 VLSDDELALLPTGAIAYDLIYTPRPTKFLRQAAAAGLTTVDGLEMLVQQGAAALEIWLDR 285
Query: 440 EAPKEFMREIVL 451
AP + MR +L
Sbjct: 286 PAPIDIMRRSLL 297
>gi|322387345|ref|ZP_08060955.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|419842613|ref|ZP_14365950.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|321141874|gb|EFX37369.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|385703558|gb|EIG40671.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
Length = 284
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A I AVNTI+ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIAYLDQLSEEACLIGAVNTIVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLA 343
+G+ SF ++ + VL GAGGA +A+ A G +++ IF E+ +
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISIFVRSSSMEKTRPYL 165
Query: 344 SDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
+ A ED+ + Q K +L NAT +GM ++ +P S L + +V
Sbjct: 166 EKIQNATGFRVDLFALEDVQDLQDSITKADLLVNATSVGMDGSSQPIPTSI-VLPEKLMV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A+ G ++G+ M L QA F L+TGKE P + + E++ K+
Sbjct: 225 ADVIYQPFETPFLKWAKEQGNQSINGLGMLLYQAAEAFELWTGKEMPTDQIWELLKQKY 283
>gi|357051701|ref|ZP_09112869.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
gi|355379429|gb|EHG26591.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
Length = 289
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 136/297 (45%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I T++ L +KP HS P +HN +F + +Y+ VD L + D
Sbjct: 5 ITGHTRLAALFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+K A + DE+ P A+ I A+NTI+ G LIG+NTD
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDG------------ 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
G+ + G + GAGGA A+ A G + +F+ + E + S
Sbjct: 111 -IGFMRALGDIEVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 346 VMGAARPF-----------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQ 393
+ A + L ++ +L NAT +GM P D P+ + LR+
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESL 229
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+TRLL+DA+AAGA +G+ M L Q F L+T K+ P E ++ ++
Sbjct: 230 AVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|347447766|pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447767|pdb|3TOZ|B Chain B, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447768|pdb|3TOZ|C Chain C, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447769|pdb|3TOZ|D Chain D, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447770|pdb|3TOZ|E Chain E, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447771|pdb|3TOZ|F Chain F, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447772|pdb|3TOZ|G Chain G, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447773|pdb|3TOZ|H Chain H, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347948704|pdb|3TNL|A Chain A, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948705|pdb|3TNL|B Chain B, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948706|pdb|3TNL|C Chain C, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948707|pdb|3TNL|D Chain D, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad
Length = 315
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 30 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 89
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 90 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 147
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD--IDF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 148 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 194
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 195 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 253
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 254 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 313
Query: 450 VL 451
+
Sbjct: 314 LF 315
>gi|238854373|ref|ZP_04644715.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|260665066|ref|ZP_05865916.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
gi|313472984|ref|ZP_07813471.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|238832995|gb|EEQ25290.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|239528824|gb|EEQ67825.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|260561120|gb|EEX27094.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
Length = 307
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T + GL++ P+ HS P +HN F + N Y+ +D+ L K + D
Sbjct: 16 LDGHTYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTLDMR 75
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K+ V+K+ D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 76 GSNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVN--DNGVLTGYTTDGIGFMKSLEDE-- 131
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
G + G+ LAGAGGA +A A G + + IF+++ ++ +
Sbjct: 132 -----------GIDIRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWAQAEKN 180
Query: 346 VM---------GAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEET-LRDYQ 393
V + ED +F+ + I +AT +GM P D V + + +
Sbjct: 181 VKTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDM 240
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VFD VY PR T+L+K A+ AG +++G+ M + Q + F L+TGK+ P +++RE++
Sbjct: 241 TVFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGVAAFKLWTGKDMPTDYIREVIF 299
>gi|365902310|ref|ZP_09440133.1| shikimate 5-dehydrogenase [Lactobacillus malefermentans KCTC 3548]
Length = 293
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 31/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
E ++ T + GL++ P+ HS P +HN F + N Y+ + + L +
Sbjct: 2 TERLDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNFAYLAFEITNEKLPGAIDAIRTL 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G ++ P K+ V+ D++ P + I AVNT++ +G L GY TD
Sbjct: 62 DMRGSNISMPNKQKVIPLLDKLDPATEMIGAVNTVVN--DNGVLTGYTTDG--------- 110
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERA 339
G+ A G + G+ LAGAGGA +A A G + + IF D F+ A
Sbjct: 111 ----IGFMKSLADEGLDIRGKKMTLAGAGGAATPMAIQAALDGVKEISIFNRHDEFFDNA 166
Query: 340 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 390
K + +D ED +F+ E + I A+AT +GM+P D+ V++ T
Sbjct: 167 KRNVDIINEKTDCKATLHELEDQDDFKKEIASSYIYADATSVGMNPLQDQTLVTDPTWFS 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+ Q+VFD VY PR T+L+ AE AG + +G+ M L Q F L+T K+ P +++REI
Sbjct: 227 EDQIVFDTVYAPRDTKLMAVAEKAGVKHVFNGLGMMLEQGAAAFKLWTKKDMPVDYIREI 286
Query: 450 VL 451
+
Sbjct: 287 LF 288
>gi|16802533|ref|NP_464018.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|46906736|ref|YP_013125.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093115|ref|ZP_00230891.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116871881|ref|YP_848662.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|226223116|ref|YP_002757223.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824236|ref|ZP_05229237.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853859|ref|ZP_05243207.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254933245|ref|ZP_05266604.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|254992917|ref|ZP_05275107.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-064]
gi|255026373|ref|ZP_05298359.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-003]
gi|255522129|ref|ZP_05389366.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|284800765|ref|YP_003412630.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284993951|ref|YP_003415719.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290894365|ref|ZP_06557329.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|300765141|ref|ZP_07075127.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386042817|ref|YP_005961622.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|386049417|ref|YP_005967408.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|386731259|ref|YP_006204755.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404280041|ref|YP_006680939.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404282928|ref|YP_006683825.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404285853|ref|YP_006692439.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404406955|ref|YP_006689670.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404409722|ref|YP_006695310.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|405748855|ref|YP_006672321.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405751719|ref|YP_006675184.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405754575|ref|YP_006678039.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|405757484|ref|YP_006686760.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|406703270|ref|YP_006753624.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|417314539|ref|ZP_12101236.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|417316779|ref|ZP_12103412.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|424713379|ref|YP_007014094.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424822233|ref|ZP_18247246.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|24211508|sp|Q8Y9N5.1|AROE_LISMO RecName: Full=Shikimate dehydrogenase
gi|67460331|sp|Q723F9.1|AROE_LISMF RecName: Full=Shikimate dehydrogenase
gi|16409866|emb|CAC98569.1| lmo0490 [Listeria monocytogenes EGD-e]
gi|46880001|gb|AAT03302.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018488|gb|EAL09245.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116740759|emb|CAK19879.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|225875578|emb|CAS04281.1| Putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607244|gb|EEW19852.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|284056327|gb|ADB67268.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284059418|gb|ADB70357.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290556072|gb|EFD89622.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|293584805|gb|EFF96837.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293593469|gb|EFG01230.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300514112|gb|EFK41173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|328467560|gb|EGF38622.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|328475795|gb|EGF46531.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|332310913|gb|EGJ24008.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|345536051|gb|AEO05491.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|346423263|gb|AEO24788.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|384390017|gb|AFH79087.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404218055|emb|CBY69419.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|404220919|emb|CBY72282.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|404223775|emb|CBY75137.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|404226676|emb|CBY48081.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404229548|emb|CBY50952.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|404232430|emb|CBY53833.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404235366|emb|CBY56768.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|404241104|emb|CBY62504.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404244782|emb|CBY03007.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360300|emb|CBY66573.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|424012563|emb|CCO63103.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 291
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|170742862|ref|YP_001771517.1| shikimate 5-dehydrogenase [Methylobacterium sp. 4-46]
gi|168197136|gb|ACA19083.1| shikimate 5-dehydrogenase [Methylobacterium sp. 4-46]
Length = 285
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 137/284 (48%), Gaps = 27/284 (9%)
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFA 226
+ + GLI P+ HS P +H + Y + + L+ FA
Sbjct: 7 NRALLGLIGAPIKHSASPAMHEAAAEALGMRAHYQLIEIAGADAGLLRSLLDGVRHLGFA 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V FPYKEAV+ D++ P A+A+ AVNT++ G+LIG+NTD A+
Sbjct: 67 GVNVTFPYKEAVLPLLDDLSPGARAVGAVNTVVV--EGGRLIGHNTDASGFGRAL----- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
+FG AG + L GAGG G+A+A + G + + D D +A++LA+
Sbjct: 120 -------VQTFGPAPAGPV-ALIGAGGVGKAIAVALSDVPGTEIRLVDTDPAKARALAAS 171
Query: 346 VMGAAR---PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
+ G A +G L N TP+GM PN D PV LR V DAVY+P
Sbjct: 172 LDGRAEIRVCAGAEEALAGARG--LVNGTPIGMLPNRD-APVPLHLLRPDLWVADAVYSP 228
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
T LL A A GA ++G + + QA+ F LFTG+EAP+ M
Sbjct: 229 LWTPLLTAARALGAPTMTGRALAIHQALDAFRLFTGREAPQAAM 272
>gi|422408579|ref|ZP_16485540.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
gi|313610573|gb|EFR85686.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
Length = 298
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 30/300 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + + +
Sbjct: 14 ERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMN 73
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++A
Sbjct: 74 LRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKEA 131
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF----- 336
G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 132 -------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE 178
Query: 337 ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLRD 391
+ + + S A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 179 KTVEKINSKTDCKAKLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRP 238
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 239 ELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF 298
>gi|297571483|ref|YP_003697257.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
gi|296931830|gb|ADH92638.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
Length = 288
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 136/293 (46%), Gaps = 39/293 (13%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
FGLI P+ HS P++HN +FR + + Y + V D+ ++ + AG +V P
Sbjct: 5 FGLIGDPIEHSLSPLIHNTSFRALGIDATYSLLEVPDHDVPSAIRSFKNLGIAGINVTMP 64
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YK AV+ E+ P A+ +VNT+ R D ++IG++TD + + DA
Sbjct: 65 YKRAVLPALHELTPTAELAQSVNTVAFR--DNQIIGHSTDGLGMLKPLRDA--------- 113
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSLASDVMGA 349
G L+ ++ G+GGAG ++A A GAR V ERA LA+ +
Sbjct: 114 ----GIDLSHEHILILGSGGAGTSVALAAAQSGARRVTLMNREGAGLERAHRLAARI--- 166
Query: 350 ARPFED----------ILNFQPEK----GAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
R D + E+ ++ N T GM+PN PV E L + +V
Sbjct: 167 -RELPDESCTIGVVPLATTVETERCVRDATVILNCTAAGMNPNPHATPVPTEWLSNRHVV 225
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
DAVYTPR T+ L+DA AGA G+ M + QA L+ P E++ E
Sbjct: 226 MDAVYTPRVTQFLRDASVAGARTFDGLSMLVAQAALAEELWLECTMPTEYVIE 278
>gi|417938182|ref|ZP_12581480.1| shikimate dehydrogenase [Streptococcus infantis SK970]
gi|343391272|gb|EGV03847.1| shikimate dehydrogenase [Streptococcus infantis SK970]
Length = 284
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 145/307 (47%), Gaps = 47/307 (15%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ V DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVGAIDLAETVANIRRYQMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+G+ SF ++G+ VL GAGGA +A+ A G V F R+ S+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILAQAILDGVSQVSV---FVRSASIEK-- 160
Query: 347 MGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEE 387
ARP+ ED + Q +L NAT +GM + +P S
Sbjct: 161 ---ARPYLEKLQHETGFRVDLFALEDHQDLQDSITHADLLVNATSVGMDGISQPIP-SSI 216
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
L D LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E +
Sbjct: 217 VLPDKLLVSDVIYQPFETPFLKWARSQGNHAVNGLGMLLYQAAEAFQLWTGKEMPTEQIW 276
Query: 448 EIVLAKF 454
E++ K+
Sbjct: 277 ELLTQKY 283
>gi|302392525|ref|YP_003828345.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
gi|302204602|gb|ADL13280.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
Length = 292
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 36/302 (11%)
Query: 166 VEHINADTK-VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 222
++H+N + + + GL PV HS P++HN F ++ + +Y+P V D+LK
Sbjct: 3 LDHLNLEERELVGLFGYPVKHSLSPVMHNTAFSKLDLDYLYLPFEVEPDNLKAAVEGIRG 62
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
+ G ++ P+KEAV+ + D+V A+ I AVNTI + G+LIGYNTD
Sbjct: 63 LNLRGVNLTIPHKEAVIPYLDQVSKEAELIGAVNTI--KNEAGELIGYNTDG-------- 112
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKS 341
RG+ G + ++ GAGGA RA+AF G R+ + + F++A+
Sbjct: 113 -----RGFVRSLQEEGFMPQNKNVLIVGAGGAARAVAFQLGLEGVERLYVANRTFKKAED 167
Query: 342 LASDV-----MGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSE-ET 388
L SD+ M +P L + EK +L + TP+GMHP +D PV E E
Sbjct: 168 LVSDIKKGLEMETVQP----LPLKQEKLKKIISGIDLLVDTTPIGMHPESDVEPVIEPEL 223
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
++ +V D VY P +T LLK A+ GA VSG+ M + Q F ++TGK+AP + M E
Sbjct: 224 IQPDMVVSDLVYNPVETSLLKAAKDRGAKTVSGLGMLVHQGAISFEIWTGKKAPVKLMAE 283
Query: 449 IV 450
+
Sbjct: 284 TI 285
>gi|402782448|ref|YP_006637994.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|402543306|gb|AFQ67455.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 287
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|423127377|ref|ZP_17115056.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
gi|376394416|gb|EHT07066.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
Length = 287
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD + A+++A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDGTGYMRALKEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKEISIFNRKDKFFANAE 167
Query: 341 SLASDVMG----AARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + A F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCAIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSIL 286
>gi|255022416|ref|ZP_05294402.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-208]
gi|422808610|ref|ZP_16857021.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378752224|gb|EHY62809.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 291
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|336248715|ref|YP_004592425.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
gi|334734771|gb|AEG97146.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
Length = 287
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD+ LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
G + G+ + GAGGA A++ A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISIFNRKDKFFANAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + IL NAT +GM P ++ + ++ LR
Sbjct: 168 QTVAKIRDNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E+++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKSIL 286
>gi|223044396|ref|ZP_03614430.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
gi|222442265|gb|EEE48376.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
Length = 269
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 22/282 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|238893051|ref|YP_002917785.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238545367|dbj|BAH61718.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 292
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 160 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 217
+R E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVV 60
Query: 218 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 277
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 278 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---D 333
+ A+ +A G + G+ + GAGGA AL A G + + IF D
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRD 165
Query: 334 IDFERAKSLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVS 385
F A+ + + F+ D L + + IL NAT +GM P ++ +
Sbjct: 166 KFFANAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLP 225
Query: 386 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+++ LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P +
Sbjct: 226 DDSFLRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVD 285
Query: 445 FMREIVL 451
+++ I+
Sbjct: 286 YIKSILF 292
>gi|409351411|ref|ZP_11234133.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
gi|407876775|emb|CCK86191.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
Length = 310
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K+ V+ + D++ +Q AVNTI+ G L GY TD
Sbjct: 85 GSNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVN--DHGVLTGYTTDG------------ 130
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA-- 343
G+ G + G++ LAGAGGA +A A GA+ + IF+++ ++ +
Sbjct: 131 -MGWLRSLNKDGQDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKN 189
Query: 344 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 393
+D + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VDTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDM 249
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+
Sbjct: 250 VVSDTVYAPRKTKLMEVAEKAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|47094716|ref|ZP_00232331.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|254911162|ref|ZP_05261174.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|254935490|ref|ZP_05267187.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386046141|ref|YP_005964473.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47016856|gb|EAL07774.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|258608067|gb|EEW20675.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293589089|gb|EFF97423.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|345533132|gb|AEO02573.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 291
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPFEDILNFQP-----EKGAILANATPLGMHP-NTDRVPVSEETL 389
+ + + S A+ F DI N + + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINSKTDCKAQLF-DIENHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|448419716|ref|ZP_21580560.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
gi|445674630|gb|ELZ27167.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
Length = 266
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 140/283 (49%), Gaps = 21/283 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
+VFGL+ PVGHS P +H + V+ + YV +DL + AG +V
Sbjct: 2 QVFGLVGNPVGHSLSPPMHEAAYDRVDMDARYVTFEPSPEDLSAAVEGAEALGIAGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++ E LA I AVNT+ DG GYNTD G +
Sbjct: 62 IPFKREMVDLV-EPDELAARIGAVNTVGF--GDGPPRGYNTDAA-------------GVR 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
A PL GR V+ GAGGAGRA +F GA V + + ERA SLA+DV GA
Sbjct: 106 RSFAHHDVPLDGRSAVVVGAGGAGRAASFALADAGASVHVANRTTERATSLAADVPGATG 165
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
D L+ + +L NAT +GM +D PV E L D V DAVY P +TRLL++A
Sbjct: 166 GGLDTLDGLADAD-LLVNATSVGME--SDETPVPAERLHDGLAVLDAVYAPVETRLLREA 222
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AAGA + G M L Q + F +TG++AP + M + + A
Sbjct: 223 AAAGATTIDGAWMLLFQGVEAFERWTGRDAPVDAMNDALRANL 265
>gi|406026143|ref|YP_006724975.1| shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
gi|405124632|gb|AFR99392.1| Shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
Length = 290
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 33/289 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 338
+ + ++ + GAGGAGRA+ A GA+ V +FD E+
Sbjct: 116 QDDIT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQVYVFKRTNDLFDARKEQ 166
Query: 339 AKSLASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 393
+ SDV+ P+ED ++ ++ I+ANAT +GM +PVS+ +
Sbjct: 167 LEGW-SDVV-TVLPYEDEGLIAEAFDESQIIANATNVGM-AGDQSLPVSQSVMNHLTPRH 223
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+V DA+Y P +T + A+ G+ +G+ M + QA G F +TG+ P
Sbjct: 224 IVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|422421064|ref|ZP_16498017.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313639412|gb|EFS04281.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 291
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|315281073|ref|ZP_07869790.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
gi|313615282|gb|EFR88710.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
Length = 291
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVRGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|145577897|gb|ABP82667.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|422417941|ref|ZP_16494896.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313634787|gb|EFS01220.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
Length = 291
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGRTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 QKTVEKINS-KTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|16799568|ref|NP_469836.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|423099588|ref|ZP_17087295.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|24211466|sp|Q92EG7.1|AROE_LISIN RecName: Full=Shikimate dehydrogenase
gi|16412933|emb|CAC95725.1| lin0493 [Listeria innocua Clip11262]
gi|370793944|gb|EHN61747.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 390
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 451 L 451
Sbjct: 291 F 291
>gi|402309392|ref|ZP_10828385.1| shikimate dehydrogenase [Eubacterium sp. AS15]
gi|400372359|gb|EJP25303.1| shikimate dehydrogenase [Eubacterium sp. AS15]
Length = 288
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 27/293 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEE-- 121
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 344
++ YK G VL G GGAGRA+A G ++I DID E +
Sbjct: 122 RKIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID-EALMNEVR 169
Query: 345 DVMGAARPF--------EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQ-L 394
+ + + P E+ L + + +L NATPLGM D + S + L D +
Sbjct: 170 ETINKSIPNCKVKLINDEETLKEELKDAVLLINATPLGMKGRVDMCAITSSDVLGDTKAF 229
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
V+D VY PR+T+L+K A+ G +G+ M L Q + ++ G + P +++R
Sbjct: 230 VYDIVYEPRETKLMKYAKEKGLQTTNGINMMLWQGALAYKIWLGVDMPIDYVR 282
>gi|419761794|ref|ZP_14288045.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745335|gb|EJK92542.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 287
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 341 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + F+ D L + + IL NAT +GM P ++ + +++ L
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLLP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSIL 286
>gi|257869370|ref|ZP_05649023.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
gi|257803534|gb|EEV32356.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
Length = 289
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 136/297 (45%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I T++ L +KP HS P +HN +F + +Y+ VD L + D
Sbjct: 5 ITGHTRLATLFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+K A + DE+ P A+ I A+NTI+ G LIG+NTD
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDG------------ 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
G+ + G + GAGGA A+ A G + +F+ + E + S
Sbjct: 111 -IGFMRALGDIEVSIIGGTMTVIGAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 346 VMGAARPF-----------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQ 393
+ A + L ++ +L NAT +GM P D P+ + LR+
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESL 229
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
V+D +Y PR+TRLL+DA+AAGA +G+ M L Q F L+T K+ P E ++ ++
Sbjct: 230 AVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|408410402|ref|ZP_11181620.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
gi|407875433|emb|CCK83426.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
Length = 310
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K+ V+ + D++ +Q AVNTI+ G L GY TD
Sbjct: 85 GSNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVN--DHGVLTGYTTDG------------ 130
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA-- 343
G+ G + G++ LAGAGGA +A A GA+ + IF+++ ++ +
Sbjct: 131 -MGWLRSLNKDGQDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKN 189
Query: 344 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 393
+D + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VDTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDM 249
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+
Sbjct: 250 VVSDTVYAPRKTKLMEVAERAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|374585221|ref|ZP_09658313.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
gi|373874082|gb|EHQ06076.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
Length = 292
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 141/302 (46%), Gaps = 39/302 (12%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFS-TYSSPD 224
++ I + VFG+ PV HS PILHN TF + +NG+YVP VD F
Sbjct: 1 MKGITGQSAVFGIFGNPVSHSISPILHNRTFEKMGFNGVYVPFCVDQTGPFLKKAVLHMG 60
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLI-GYNTDCEASITAIE 282
+G SV P+K K D+ L++ A NT+ +R +G+++ +NTD ++ A++
Sbjct: 61 LSGLSVTIPHKLWAAKAADQRDALSELTGAANTLLVRETRNGRILSAHNTDGPGAMRALQ 120
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA------LAFGAKSRGA------RVV 330
A+ + L GR V+AG GG+ RA LA G K ++
Sbjct: 121 TAVPD-------------LKGRRVVIAGYGGSARAIVGQLLLASGVKQVAVTGRNMPKIK 167
Query: 331 IFDIDFERAKSLASDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET 388
F F + + D P E +L+++ IL N TPLGM +PV E
Sbjct: 168 AFIRSFTKKRP---DWAAKLIPLKEEALLDYEAH---ILINTTPLGMKGFDLSLPVPESF 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA---PKEF 445
LR V D VY P T +L A+ A IV G M L QA+ QF LFTG +A + F
Sbjct: 222 LRPGLAVMDIVYRPEMTPILIAAKKNRATIVPGYWMLLYQAVLQFELFTGMKAGPDVENF 281
Query: 446 MR 447
MR
Sbjct: 282 MR 283
>gi|448360171|ref|ZP_21548813.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
gi|445640121|gb|ELY93211.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
Length = 278
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 141/292 (48%), Gaps = 26/292 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS+ P +H + + Y+ YV D DL+ + + G +V
Sbjct: 2 NVFGLLGNPVGHSRSPPMHEAAYDELTYDARYVTFEPDPSDLEAAVAGADALGITGLNVT 61
Query: 232 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIEDA 284
P+K+ V++ E LA I AVNTI P S G+ G+NTD ++ A+ +
Sbjct: 62 IPFKQDVLELDLVEADELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRALRE- 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 344
+AG V+ GAGGAGRA++F GA V I + A LA+
Sbjct: 121 ------------HDVTVAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHELAA 168
Query: 345 DVMGAARP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
DV A E +L IL NAT +GM D PV + L V DAVY P
Sbjct: 169 DVPDATGHGLDEGVLESLLADADILVNATSVGME--ADETPVPADALHGDLAVMDAVYQP 226
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+TRLL+DA AGA V G M L Q + F L+TG+EAP + M E + A+
Sbjct: 227 LETRLLRDATDAGATTVDGAWMLLYQGVEAFELWTGREAPVDVMNEALRAQL 278
>gi|427726034|ref|YP_007073311.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
gi|427357754|gb|AFY40477.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
Length = 291
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 225
I TK+ G+I PV HS P++HN + + +Y+ P+ ++LK + + D
Sbjct: 2 QIFGTTKLLGVIGDPVKHSFSPLMHNAAIAELGTDYVYLAFPISANNLKTALDGFRAIDL 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GFS+ P+K+++M + + P AQ + AVNT+ + + + G NTD I ++
Sbjct: 62 KGFSITIPHKQSIMAHLEAIAPEAQMVGAVNTVWQTETGWQ--GTNTDVAGFIAPLKALD 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
K+ S SP V+ G GGA RA+ G G ++ + + E+ + A
Sbjct: 120 KDW-------STVSP------VILGNGGAARAVVVGCHQLGCPQIHVIGRNPEKLTTFAK 166
Query: 345 DVMGAARPFEDI--------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQ 393
G P E LN L N+TP+GMHPN D PVS E ++
Sbjct: 167 SWQGT--PLEQKLQTHLWGDLNRLIPTTKFLVNSTPVGMHPNIDASPVSAELMKLLSSDS 224
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+ +D +YTP T+ L+ A+ GA I G+EM ++Q + + P MR+ +L
Sbjct: 225 IAYDLIYTPSPTQFLQLAQNQGATIFDGLEMLVQQGAIALEKWLAQPVPVATMRQALL 282
>gi|314933766|ref|ZP_07841131.1| shikimate dehydrogenase [Staphylococcus caprae C87]
gi|313653916|gb|EFS17673.1| shikimate dehydrogenase [Staphylococcus caprae C87]
Length = 269
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 22/282 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFLLLRDIITEKKLSGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|37522847|ref|NP_926224.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
gi|35213849|dbj|BAC91219.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 285
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ GL+ PVGHS P++HN + + +YVP+ V DL + + F
Sbjct: 7 IRGTTRLLGLLGYPVGHSLSPVMHNAALARLGLDLVYVPLPVAPADLPQAVAGLRRAGFV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+A++ D + P A+ AVNT +R +DG L G NTD E + IE
Sbjct: 67 GFNVTIPHKQAIVPLLDTLTPEAKGAGAVNT-VRVETDGSLTGTNTDIEGFMGPIETV-- 123
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
P G +L G GG+ A+A G G R+ + D + + S
Sbjct: 124 -------------PFQGAATIL-GCGGSALAVALGCAQLGFTRIHVVGRDPAKLAAFKSH 169
Query: 346 VMGAARP----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 400
+ AA +E + + P G +L N TP+GM P T+ P+ + L V+D +Y
Sbjct: 170 LHPAATVEIDLWEQLESLLPGTG-LLINTTPVGMIPATEASPLEDLGALPLKACVYDLIY 228
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
PR TRLL+ A A G+ M + QA F +TG + P + M +
Sbjct: 229 RPRPTRLLQLAVARSLQTFDGLGMLVGQAEAAFYFWTGCKPPTQLMLQ 276
>gi|418120030|ref|ZP_12756981.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|418198134|ref|ZP_12834594.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
gi|353789143|gb|EHD69539.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|353862772|gb|EHE42702.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
Length = 506
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 209/464 (45%), Gaps = 67/464 (14%)
Query: 24 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 79
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 80 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 133
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 134 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 192
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 193 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSFT--ISGKKMTLLG 351
Query: 311 AGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP-------- 361
AGGA +++ A G +++ +F + S M RP+ D L Q
Sbjct: 352 AGGAAKSILAQAILDGVSQISVF---------VRSVSMEKTRPYLDKLQEQTGFKVDLYA 402
Query: 362 -----------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ +L NAT +GM + VP S L + LV D +Y P +T LK
Sbjct: 403 LENVSELQARIVESDLLVNATSVGMDGQSSPVPESI-NLPETILVADIIYQPFETPFLKW 461
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 462 ARSQGKPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|418096456|ref|ZP_12733568.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
gi|353769141|gb|EHD49662.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
Length = 506
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 210/467 (44%), Gaps = 73/467 (15%)
Query: 24 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 79
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 80 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 133
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 134 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 192
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 193 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSFT--ISGKKMTLLG 351
Query: 311 AGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP-------- 361
AGGA +++ A G +++ +F + S M RP+ D L Q
Sbjct: 352 AGGAAKSILAQAILDGVSQISVF---------VRSVSMEKTRPYLDKLQEQTGFKVDLCA 402
Query: 362 -----------EKGAILANATPLGMHPNTDRVP---VSEETLRDYQLVFDAVYTPRKTRL 407
+ +L NAT +GM + VP V ETL LV D +Y P +T
Sbjct: 403 LEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPETL----LVADIIYQPFETPF 458
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 459 LKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|15678270|ref|NP_275385.1| shikimate 5-dehydrogenase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621291|gb|AAB84748.1| shikimate 5-dehydrogenase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 260
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 25/267 (9%)
Query: 191 LHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 248
+HN FR + + IYVP V ++LK + G +V P+KEAV+++ D++H
Sbjct: 1 MHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVEGVNVTIPHKEAVLEYIDDIHGT 60
Query: 249 AQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVL 308
A I AVNT+ + DG + GYNTD + A+E+ G G F L
Sbjct: 61 AALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTSVEGSSVLILGAGGAARACAFQL 118
Query: 309 AGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE------DILNFQPE 362
A G + + I + E+A+ LA D M FE +++ +
Sbjct: 119 AEKGASD-------------ITILNRTPEKARLLAED-MADKLGFEASYGGYELIQGSVK 164
Query: 363 KGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
IL + TP+GMHP+TD P V E + + +V D VY P++T LL++AE A AI VSG
Sbjct: 165 SADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLVYNPQRTVLLREAERASAIPVSG 224
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+ M L Q + F ++TG++ P + M +
Sbjct: 225 IRMLLYQGVEAFRIWTGRDPPLDVMED 251
>gi|443321693|ref|ZP_21050737.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
gi|442788605|gb|ELR98294.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
Length = 282
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 33/295 (11%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 223
+E I TK+ G+I P+ HS P++HN + + + +YVP V DL + +
Sbjct: 1 MEIITGKTKLLGVIGDPIEHSLSPVMHNAAIKALGLDYVYVPFAVKSADLGGAIAGLQAI 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ GF+V P+K+A++ F E+ PLAQ + A NT+ R + + G NTD E + + +
Sbjct: 61 NCQGFNVTIPHKQAIIPFLREISPLAQMVGATNTVWREATHWQ--GTNTDVEGFLAPLRE 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDI----DF 336
ER + PL + G GGA RA+ K G RVV ++ DF
Sbjct: 119 I--ERPWHEI-----KPL------VLGYGGAARAVVVALKRLGCPEIRVVGRNLQKLADF 165
Query: 337 ERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ--- 393
S + + P PE +L N TP+GM+P+TD P+ + Q
Sbjct: 166 AANWSEITSYDSSCLP-----ELLPET-ELLINTTPVGMYPDTDASPIESSLIGLIQPGA 219
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V+D +Y P T+LL + + G I + G+EM + Q ++ + P E MR+
Sbjct: 220 IVYDLIYIPNPTKLLLETQKQGVIALDGLEMLVNQGAIALGIWLQRPLPVEIMRQ 274
>gi|392409696|ref|YP_006446303.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390622832|gb|AFM24039.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 280
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 144/308 (46%), Gaps = 54/308 (17%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV------DDLKKFFSTYSS 222
+ T + G+I PV HS P +HN FR +N + YVP+ V D LK +
Sbjct: 2 VKGTTNLVGIIGFPVSHSLSPTMHNAAFRALNMDWKYVPLSVRPQNVPDALKGLIAL--- 58
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
F G +V P+KE V + +++ AQ I AVNTI+ + + L G+NTD
Sbjct: 59 -GFRGANVTVPHKEKVTPYLNDISADAQQIGAVNTILVQ--EDTLSGFNTDWS------- 108
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD--------- 333
G+ N G +G ++ G+GG+ RA+++ RGA + I
Sbjct: 109 ------GFLNHLTEIGFDPSGAKALILGSGGSARAVSYSLCQRGADISILSRNTGTAGLI 162
Query: 334 IDFERAKSL--------ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 385
ID ++S A + +AR F+ ++ N TPLGM P + P
Sbjct: 163 IDELSSQSAQNRIGSISAESLRDSARDFD-----------LVVNTTPLGMTPLEELSPWP 211
Query: 386 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+ L +D VY P KTR L+ AE +GA+ V+G+ M + QA F ++T +EAP
Sbjct: 212 HDIGFPRRALAYDLVYNPAKTRFLEIAEDSGALAVNGLGMLVHQAAEAFKIWTDREAPVH 271
Query: 445 FMREIVLA 452
M+E +L+
Sbjct: 272 VMKEAILS 279
>gi|296133259|ref|YP_003640506.1| shikimate 5-dehydrogenase [Thermincola potens JR]
gi|296031837|gb|ADG82605.1| shikimate 5-dehydrogenase [Thermincola potens JR]
Length = 293
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 27/295 (9%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 222
K++ I T V G+ PV HS P++HN F+ + +YVP V + L + S +
Sbjct: 4 KIQRITGKTGVIGIFGFPVEHSFSPVMHNAAFQAGGLDYVYVPFEVPPERLAEAVSAIRA 63
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
G +V P+KE V+++ D + A+ I AVNTI+R S +L GYNTD + ++E
Sbjct: 64 LKLRGVNVTIPHKERVVQYLDSLSEEARLIGAVNTIVR--SGDELKGYNTDAAGFLRSLE 121
Query: 283 D---AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERA 339
+ A++ A + LAGA G +V+ + + +A
Sbjct: 122 EKKVAVQGANVLLLGAGGAARAVAVQLALAGARRVG-------------IVVRNSGWRKA 168
Query: 340 KSLASDVMGAARP------FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDY 392
+ +A V G + FE+ + EKG I+ N TP+GMHPN +P +T+
Sbjct: 169 EGIAEIVAGHSCAKSTVALFENAQDLIAEKGNIIINCTPVGMHPNVMEMPPFKLDTIPAD 228
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+V D +Y P +T LK A+A G VSG M L Q + L+T ++AP + MR
Sbjct: 229 SVVCDLIYNPAETLFLKTAKARGLKTVSGSGMLLYQGTLAYELWTRQQAPVDIMR 283
>gi|302390016|ref|YP_003825837.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
gi|302200644|gb|ADL08214.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
Length = 288
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I DTKV G+I PV HS P++HN F + + +YVP V ++LK+ + +
Sbjct: 2 EIKGDTKVLGIIGYPVDHSLSPVIHNAAFEELKLSCVYVPFPVKPENLKEAIEGIRALNV 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+K VM + DE+ A I AVNTI+ + G+L+G+NTD
Sbjct: 62 GGVNVTIPHKVKVMNYLDEISKEAAVIGAVNTIVNK--GGRLVGFNTDAS---------- 109
Query: 286 KERGYKNGTASF-GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI-----------FD 333
G+K+ G L G+ ++ GAGGA RA+ GA +I +
Sbjct: 110 ---GFKDALYRIAGVDLTGKRVLVLGAGGAARAVVGQCLLSGASSIIVSNRTKTRAKELE 166
Query: 334 IDFERAK--SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLR 390
F++A S S + +P+ + + I+AN G + + + + L
Sbjct: 167 FHFKKAGMGSKISIIEWGKQPWRRV----ASRVDIIANTAGAGQKDDLGLELEIPWDDLD 222
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+ FDAVY TRLLK+A++ G + V G M L Q + F L+TG +AP E M E
Sbjct: 223 KNTVFFDAVYGSGSTRLLKEAQSRGHLTVPGKYMLLYQGVEAFKLWTGLDAPLEVM-EAA 281
Query: 451 LAKF 454
L +F
Sbjct: 282 LDRF 285
>gi|429123570|ref|ZP_19184103.1| shikimate 5-dehydrogenase [Brachyspira hampsonii 30446]
gi|426280532|gb|EKV57545.1| shikimate 5-dehydrogenase [Brachyspira hampsonii 30446]
Length = 283
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 151/298 (50%), Gaps = 33/298 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
+NA+T + GL + P HS PI+HN F +N N IY+ VD +LK+ ++ + +
Sbjct: 2 QVNAETILTGLFASPSKHSISPIMHNEGFNKLNLNYIYLAFEVDKNNLKEAVNSIRTLNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ P K+ V+K+ D + A+ +VNTI+ ++G L GY+TD E I ++E+
Sbjct: 62 RGVNLSMPNKKEVIKYLDNISEAAELSQSVNTIVN--NNGILTGYSTDGEGFIKSLEE-- 117
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKSL 342
E+ + + + + G GGA A+ A G + + +F D ++ K +
Sbjct: 118 -EQVF----------IKDKNITILGTGGASIAIISQAALYGVKEIYVFKRDKNWNEQKKI 166
Query: 343 ASDVMGAAR------PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDY 392
++ ED IL + E +L NAT +GM + V + EE+ R+
Sbjct: 167 IDNIACKTNCSITLYSLEDKNILKSKIENSYVLINATSVGMK---EDVSLIEESSFFRND 223
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T + P E+++ I+
Sbjct: 224 LVVSDCIYHPAKTKLLKIAEKEGCKIINGMGMLLYQGALAFELWTNNKMPVEYIKNII 281
>gi|425054313|ref|ZP_18457820.1| shikimate dehydrogenase [Enterococcus faecium 505]
gi|403036076|gb|EJY47444.1| shikimate dehydrogenase [Enterococcus faecium 505]
Length = 284
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F + + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANDIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIEKKKMTLLGAGGASKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + + L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKINQSPLLDINMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYEPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|347753134|ref|YP_004860699.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
gi|347585652|gb|AEP01919.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
Length = 280
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 28/286 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGIDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K+A+M + DE+ LA+ I AVNT++R P GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDEIDLLAETIGAVNTVVRTPHG--WAGYNTDGPGFMQALKE--------- 112
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
G ++G ++ GAGGA RA+ + GA V D ++ M P
Sbjct: 113 ---ESGRVISGEKVLVIGAGGAARAIYYTLCREGAVTV----DLCNRTVKKAEEMRDESP 165
Query: 353 F---EDILNF-----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F +L Q + ++ T +GMHPNTD P+S L V D +Y P +
Sbjct: 166 FPCPSKVLTLKEAEEQLGEYTLIVQTTSIGMHPNTDAQPLSVRNLNPDAFVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
T+ LK+A+ GA + +G+ MF+ Q F +TG + M+ +V
Sbjct: 226 TKFLKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTRKMKNVV 271
>gi|227498944|ref|ZP_03929083.1| shikimate dehydrogenase [Acidaminococcus sp. D21]
gi|352683445|ref|YP_004895428.1| shikimate dehydrogenase [Acidaminococcus intestini RyC-MR95]
gi|226904395|gb|EEH90313.1| shikimate dehydrogenase [Acidaminococcus sp. D21]
gi|350278098|gb|AEQ21288.1| shikimate dehydrogenase [Acidaminococcus intestini RyC-MR95]
Length = 287
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 146/294 (49%), Gaps = 26/294 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ +TK+ L+ P+ S + N + N +Y D+ L + +FA
Sbjct: 4 VDINTKMITLLGLPLTQSFAARMQNKGYEAAGLNMVYFYTETDNEHLGDIVNGLRYMNFA 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K V+++ DE+ PL Q + + NT+++ P +GKLIGYNTD TA+
Sbjct: 64 GFAVTKPNKVKVLEYLDELDPLCQKMGSSNTVVKTP-EGKLIGYNTDGVGFYTAL----- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASD 345
T G + +F G GGAGRA+ GAR + FE AKSL D
Sbjct: 118 -------TEEAGVKVDQCVFFCFGGGGAGRAMCSILAYHGARKIYITDKFEGCAKSLVDD 170
Query: 346 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
+ + F + F P ++ NA+ +GM + P+ +E ++ QL FDA
Sbjct: 171 I---NKNFAPVAEFVPYGDFSKLSACDVVLNASGVGMGRSIGETPLPKEYMKPEQLYFDA 227
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
Y P KT+ L DAEA G I++G+ M L Q Q L+TGK+AP E MRE +LA
Sbjct: 228 CYNPAKTQFLLDAEAKGCRILNGLGMSLYQGAAQIELWTGKKAPVEAMREELLA 281
>gi|291522732|emb|CBK81025.1| shikimate dehydrogenase [Coprococcus catus GD/7]
Length = 289
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 30/297 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I T + GL+ PV HS P++HN +FR + + Y+ V D+LK
Sbjct: 3 DRITGHTVLTGLLGSPVAHSISPMMHNESFRQLGLDYAYLAFDVGTDNLKTAVEGLKVLG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF++ P K + +CD++ P A+ I AVNT++ +G L G+ TD + A DA
Sbjct: 63 VRGFNLTMPDKNLMCTYCDKLSPAAELIGAVNTVVN--DNGVLTGHTTDGIGYMEAARDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID---FERAK 340
G L G+ L G GGA A+ A G + + +F+I + R +
Sbjct: 121 -------------GYDLTGKTMTLLGGGGAATAICVQAALDGLKEIRVFNIKDQFYGRLE 167
Query: 341 SLASDVMGAAR---PFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSE-ETLRD 391
L +++ D+ + + E IL N T +GM PNTD + + + R
Sbjct: 168 KLTANITAKTSCKVTLHDLADERALYDSIETSDILTNGTSVGMAPNTDACLIKDTDVFRK 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V D +Y P +T+LLK A G +G+ M L Q F ++TG++ P + ++E
Sbjct: 228 ELIVSDVIYNPEQTKLLKLASEKGCPTFNGLYMLLYQGAAAFKIWTGQDMPVDIIKE 284
>gi|390935057|ref|YP_006392562.1| shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570558|gb|AFK86963.1| Shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 283
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 26/287 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN+ T +FG+I P+GHS P++HN F ++++N +YV V +DLK +
Sbjct: 3 INSKTGIFGIIGHPIGHSLSPLIHNNAFENLDFNSVYVSFDVKQEDLKDAIMGVKALGIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE+V+K+ D + A+ I AVNTI R + G L GYNTD +T +++K
Sbjct: 63 GLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--RNNAGLLEGYNTD----VTGFMESLK 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS- 344
E + G+ V+ GAGGA +A+A G GA+ + + + ++A L+
Sbjct: 117 EHNV---------DVEGKNAVILGAGGAAKAVATGLALLGAKSIYVCNRSIDKANELSIH 167
Query: 345 -----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
++ + D LN E +L NAT +GMHPN D P+ E+ + + V+D +
Sbjct: 168 IENNFNIKSRGIAYND-LNMLDEID-MLINATSVGMHPNVDVSPIEEDVVAKAKFVYDII 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
Y P KT L AE ++G++M + QA F ++TG K+ +
Sbjct: 226 YNPEKTLFLSYAEKYQIRYINGLDMLVNQANDSFKIWTGVNFDKKII 272
>gi|145577957|gb|ABP82697.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
poloniensis]
Length = 238
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHSVALSLEKATE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ I+ T +GMHP + P+ +L +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|331700628|ref|YP_004397587.1| shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
gi|329127971|gb|AEB72524.1| Shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
Length = 290
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 146/291 (50%), Gaps = 37/291 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL---- 342
+ + ++ + GAGGAGRA+ A GA+ V F+R L
Sbjct: 116 QDDMT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQVYV---FKRTNDLFEAR 163
Query: 343 ------ASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-- 392
SDV+ P+ED ++ ++ I+ANAT +GM +PVS+ +
Sbjct: 164 KEQLEGWSDVV-TVLPYEDEGLIAEAFDESQIIANATNVGM-AGDQSLPVSQSVMNHLTP 221
Query: 393 -QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+V DA+Y P +T + A+ G+ +G+ M + QA G F +TG+ P
Sbjct: 222 QHIVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|375082963|ref|ZP_09730003.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
gi|374742310|gb|EHR78708.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
Length = 272
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 150/281 (53%), Gaps = 23/281 (8%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAG 227
+A+T+++G+I PV HS P++HN F+ + N IY+ V + L + +G
Sbjct: 3 DAETRLYGVIGFPVRHSLSPVMHNAAFKALGINAIYLAFEVPPERLGDAMEGVRALGISG 62
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
+V P+KEAV+ F D + + I +VNT++ R GKL G+ TD + A+E AI+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGKLEGHTTDGLGARRALERAIE- 119
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DV 346
L GR ++ GAGGAG+A+A+ S+ VV+ + E+AK+L +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSKDNEVVVLNRTPEKAKALERFGI 165
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
MG A E++ + E +L NAT +GM N+ PV E LR +V D VY P KTR
Sbjct: 166 MGEALNRENLGKYL-EWAEVLINATSVGM--NSWETPVPGEMLRKDLVVMDIVYKPLKTR 222
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LL +AE G V G+ M + Q I F L+TG + + MR
Sbjct: 223 LLTEAELMGCKTVDGLWMLVYQGIESFKLWTGFKPDEGLMR 263
>gi|430820141|ref|ZP_19438778.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
gi|430439831|gb|ELA50141.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
Length = 284
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ + + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSLLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|430852566|ref|ZP_19470297.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
gi|430541400|gb|ELA81545.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
Length = 284
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+T LLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|161528058|ref|YP_001581884.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
gi|259585286|sp|A9A233.1|AROE_NITMS RecName: Full=Shikimate dehydrogenase
gi|160339359|gb|ABX12446.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
Length = 273
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 24/288 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K F +I P+ HS P +H+ FR +N + Y+ + D+L + AGF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKDELGEGIEGLKKIQIAGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +MK+ D++ I AVNT++ +DG L GYNTD + + + +K+R +
Sbjct: 63 IPHKIEMMKYLDKIDESCSLIGAVNTVV--SNDGVLKGYNTDMDGFL----EPLKKRNIE 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ +L GAGGA RA+ G AK + + I + E+A +L +
Sbjct: 117 ---------IENSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANNLVEFAKKIS 167
Query: 351 RPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
I Q + A I+ NAT +G+ + P+S E + + +V+D VY P T
Sbjct: 168 LDANAITIDQVGESAKDYNIIVNATSIGLQ--NESSPISFEGVNEKTVVYDIVYLPMNTD 225
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK A+ A I+ G EM L QA+ F ++ G EAP M++ +L F
Sbjct: 226 FLKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF 273
>gi|193213291|ref|YP_001999244.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
gi|193086768|gb|ACF12044.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
Length = 296
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 36/297 (12%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSV 230
KVFGLI + V +S P++HN F+ + IY + + + + + AGF+V
Sbjct: 8 KVFGLIGRNVDYSWSPLIHNTAFQALGLPSIYTIFNIAAPELVGNALTGARALGIAGFNV 67
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYK+ V+ F DE+ P AQAI AVNTI+ +G+L G+NTD G+
Sbjct: 68 TIPYKKTVVPFLDELSPEAQAIGAVNTIVN--DNGRLTGHNTDIA-------------GF 112
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASDVMG 348
+ G+ + G GGA A AF + V + + E+A+++
Sbjct: 113 AAPLLPMAEQIHGKPVCIFGNGGAALAAVEAFRLHFHPSSVRLMVRNLEKAEAMLEGY-- 170
Query: 349 AARPF-EDILNFQPE---------KGAILANATPLGMHPNTDR----VPVSEETLRDYQL 394
A R E L + + + ++ NATP+G +D VP + L + Q+
Sbjct: 171 AHRELVEPCLTAELDTPDGERLLGECCVIVNATPIGTAGRSDAIQSVVPARRKLLHEGQI 230
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
V+D VY P +T LL +A AAGA +SG+EM + QA F+++TG+E P + +R+ VL
Sbjct: 231 VYDMVYNPLETPLLAEARAAGAETISGIEMLIGQAARSFSIWTGQEMPVDTVRKTVL 287
>gi|145577927|gb|ABP82682.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
oswaldocruzi]
Length = 238
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQFISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 358
+ +L GAGGA RA+ F G + + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATK 166
Query: 359 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 418
Q I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 419 VSGVEMFLRQ 428
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|444353151|ref|YP_007389295.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
gi|443903981|emb|CCG31755.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
Length = 287
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 36/302 (11%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD+ LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL-- 342
G + G+ + GAGGA A++ A G + + F R
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISI---FNRKDKFFA 164
Query: 343 -ASDVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET- 388
A + R D L + + IL NAT +GM P ++ + ++
Sbjct: 165 NAEQTVAKIRDNTDCEIHLFDLDDHAKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSF 224
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E+++
Sbjct: 225 LRPDLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKS 284
Query: 449 IV 450
I+
Sbjct: 285 IL 286
>gi|306820400|ref|ZP_07454037.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551563|gb|EFM39517.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 288
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEEL- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 344
+ YK G VL G GGAGRA+A G ++I DID E +
Sbjct: 123 -KIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID-EALMNEVR 169
Query: 345 DVMGAARPF--------EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQ-L 394
+ + + P E+ L + + +L NATPLGM D + S + L D +
Sbjct: 170 ETINKSIPNCKVKLINDEETLKEELKDAVLLINATPLGMKGRVDMCAISSSDVLGDTKAF 229
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
V+D VY PR+T+L+K A+ G +G+ M L Q + ++ G + P +++R
Sbjct: 230 VYDIVYEPRETKLMKYAKEKGLQTTNGINMMLWQGALAYKIWIGVDMPIDYVR 282
>gi|402571542|ref|YP_006620885.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402252739|gb|AFQ43014.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 279
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 28/283 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
K F +I P+ HS P +HN + + N Y V++ L++ + FAG++V
Sbjct: 3 KQFAVIGNPIKHSLSPAMHNAGYETLGINAEYQRFRVEEHCLEEAVKGLRALGFAGWNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ F D + P A+ AVNT+ + +G+LIG+NTD + + ++E+ + RG K
Sbjct: 63 LPHKEAIVSFMDTLTPEAEKAGAVNTV--KNQNGRLIGHNTDGKGFVRSVENDL--RGLK 118
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGA 349
G+ VL GAGGA + +A +G + I + + E+AK+L + +G
Sbjct: 119 -----------GKKAVLLGAGGASKGIAMALAQQGMNLHILNRNPEKAKTLVQIIHSVGG 167
Query: 350 ARPFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
F + F+P E +L T +G+ N + P S E + LV D ++ P +T
Sbjct: 168 TATFGE---FEPGDWLENLDLLVQTTSVGL--NKEPFPFSLEGIDKEALVVDIIFNPLET 222
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L++A+ G +G+EM L Q + + G++AP + MR+
Sbjct: 223 SFLREAKKLGCRTQNGLEMLLYQGALAWEFWLGEQAPLDAMRQ 265
>gi|322372563|ref|ZP_08047099.1| shikimate dehydrogenase [Streptococcus sp. C150]
gi|321277605|gb|EFX54674.1| shikimate dehydrogenase [Streptococcus sp. C150]
Length = 285
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+Y+ + DL + D
Sbjct: 2 QIDGYTRLAAVVANPIKHSISPFIHNLAFEKTQVNGVYLAWEIPESDLAETVENIRRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+ V+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKQKVISFLDELSPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI---DFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK+
Sbjct: 119 -------------SPKGAHLMIL-GAGGAAKAIVTQAVLDGAKKVSIYVRPQSLDKAKNS 164
Query: 343 ASDVMGAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
+M D+ FQ E K +L NAT +GM + +P++++T+ L
Sbjct: 165 FKTLMDQTDGHLEFHALSDVDYFQEELGKADLLVNATSVGM--DGKSLPIAKDTIFPKGL 222
Query: 395 VF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+ D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LIADIIYQPFETPFLALARQQGLEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|414085080|ref|YP_006993791.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
gi|412998667|emb|CCO12476.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
Length = 289
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 30/303 (9%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
E ++ T++ GL++ P+ HS P +HN F + + Y+ V D L+ +
Sbjct: 2 TERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRAL 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
G ++ P K+ V K+ D++ P A+ + AVNTI+ +G L G+ TD +
Sbjct: 62 GMRGSNISMPNKQVVTKYLDKLSPAAEMVGAVNTIVN--DNGILTGHITDGTGFM----- 114
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD------IDF 336
RG K S + G + GAGGA A+ A G + + IF+ +
Sbjct: 115 ----RGLKQSDVS----IIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNA 166
Query: 337 ERAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LR 390
ER +L ++ D+ L Q + I NAT +GM P D +++ T LR
Sbjct: 167 ERTVALINEKTDCKATLYDLKDQESLRQQIAESVIFTNATGVGMKPLQDESLITDPTMLR 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P +T+LLK A+ G V+G+ M L Q F ++TG+E P E++RE++
Sbjct: 227 KELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELL 286
Query: 451 LAK 453
K
Sbjct: 287 FEK 289
>gi|347547878|ref|YP_004854206.1| putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346980949|emb|CBW84873.1| Putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 291
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G++V P K + K+ D++ P A+ + AVNT++ +G L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 QKTVEKINS-KTDCKAQLFDIEDHEQLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|333998596|ref|YP_004531208.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
gi|333741045|gb|AEF86535.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
Length = 506
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 199/463 (42%), Gaps = 46/463 (9%)
Query: 7 RPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSGTRF 61
R K GG + G E R+ + L AE D ++ +L+ N+ + ++ GTR
Sbjct: 61 RRKMDGGKFAGGEGARISLFSKGLAFAEADRRHNFAYVDLEEDLNVPSLEEAARTFGTRI 120
Query: 62 IVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-VPII 119
I S NL +EDL + + G +I K+ + ++ R+++ + I
Sbjct: 121 IRSYHNLQG---VDEDLPGKIRGLLHVGDEIAKVAVMPHGFDDVLRVYRAAKDTAGIEKI 177
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGT--------PVLGLPTVESLRQTYKVEHINA 171
+G G +++L+ L Y S +GT G + L + Y+ + +
Sbjct: 178 LLCMGHMGTSTRILAEYLGSHLSYASAEGTEQDSDFPPAAPGQISPRELVELYRFRELTS 237
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
T++FG++ P+ S P N F N + +YVP D + F + G SV
Sbjct: 238 QTRLFGILGYPLKVSSSPAFFNAVFTSENTDAVYVPFPSDSVDPFMQLAAEIKLQGVSVT 297
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE V+ + ++ + + A NT+I DG G NTD ++ D I + +K
Sbjct: 298 IPYKEKVIPYLNKKLGDVETLGACNTLIAE-EDG-WTGANTDARGFSDSLLDFIGKTNFK 355
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G + GAGG +A+A + +I + RA+ A+
Sbjct: 356 -----------GCRITIIGAGGVSKAVAAEIFRLKGKALILNRTVPRAREEAA------- 397
Query: 352 PFEDILNFQPEKGAILANA--------TPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
P+ GA L NA T +GM P+ + P+ + ++V D +Y P
Sbjct: 398 PYRFAWGSLDTHGAELMNAYSDIIVQTTSVGMDPDIEGDPLEIYAFKGTEVVMDLIYKPE 457
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+TR L A AAG +++G +M +RQA Q++ + GKE P + +
Sbjct: 458 RTRFLIRAAAAGCRVMNGHDMLIRQAKYQYSYYLGKEYPSKLV 500
>gi|417656004|ref|ZP_12305695.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|418665234|ref|ZP_13226684.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|420163035|ref|ZP_14669782.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|420167992|ref|ZP_14674644.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
gi|329737254|gb|EGG73508.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|374409209|gb|EHQ80009.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|394234724|gb|EJD80298.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|394238020|gb|EJD83506.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
Length = 269
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+LK+AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILKEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIHKL 265
>gi|385260745|ref|ZP_10038888.1| shikimate dehydrogenase [Streptococcus sp. SK140]
gi|385190988|gb|EIF38416.1| shikimate dehydrogenase [Streptococcus sp. SK140]
Length = 285
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 49/308 (15%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNQAFEATNTNGVYLAWEVEGTDLAETAANIRRYQMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+G+ SF ++G+ VL GAGGA +A+ A G ++V +F + S
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILAQAILDGVSQVSVF---------VRSA 156
Query: 346 VMGAARPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVPVSE 386
M +P+ + L ++ K +L NAT +GM + +P+S
Sbjct: 157 SMEKTKPYLEKLQYETGFRVDLFALEDAQELQENIRKAELLVNATSVGMDGASQPIPISI 216
Query: 387 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
L + LV D +Y P +T LK A G ++G+ M L QA F L+TGKE P +
Sbjct: 217 -VLPERLLVADVIYQPFETPFLKWARNQGNQAINGLGMLLYQAAEAFQLWTGKEMPTAQI 275
Query: 447 REIVLAKF 454
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|402845078|ref|ZP_10893425.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
gi|423111495|ref|ZP_17099189.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|423112487|ref|ZP_17100178.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|376376694|gb|EHS89471.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|376390864|gb|EHT03546.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|402272678|gb|EJU21896.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
Length = 287
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
+KE G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 341 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNIL 286
>gi|119491415|ref|ZP_01623434.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
gi|119453410|gb|EAW34573.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
Length = 287
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 31/293 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I P+ HS P++HN + + +Y+P + DL + +++
Sbjct: 2 IQGTTKLLGVIGDPIEHSLSPVMHNAAIAEMRVDYVYLPFPIQSTDLDAALAGFAAIGVQ 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+A++ +V +A+A+ AVNT+ R + G NTD + +++
Sbjct: 62 GFNVTIPHKQAILSRLSKVSKIAEAVGAVNTVWRTSEGWE--GTNTDVAGFLAPLQN--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+F S + V+ G GGA RA+ G G + + + ++ +
Sbjct: 117 -------INTFWSK---KTAVILGNGGASRAVVAGCVELGITEIYVIGRNLQKLEVFQQS 166
Query: 346 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 394
+ + P L Q + +L N TP+GM+P+ + PV+E + L+ +
Sbjct: 167 WLES--PLSLSLQIQTWENLTEIIHQADLLVNTTPVGMYPHVENSPVTEAVMDRLKSDAI 224
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+D +YTP T+ L A+A GAII+ G+EM ++Q L+ + P E MR
Sbjct: 225 AYDLIYTPNPTQFLSLAKAKGAIIIDGLEMLVQQGASALQLWLKQSVPVEVMR 277
>gi|27376170|ref|NP_767699.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 110]
gi|27349309|dbj|BAC46324.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 110]
Length = 292
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 138/284 (48%), Gaps = 34/284 (11%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRLMLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV+ D + P A A+ AVNT++ R DG+L G+NTD G+
Sbjct: 75 YPYKEAVVPLLDALAPGAAAMGAVNTVVVR--DGRLTGHNTDTT-------------GFA 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 347
A +P +G + G GG G+A+AF S A + IFD + RA+ LA+ +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLEVADLRIFDSEPARAEKLAALLAKHG 178
Query: 348 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
GA A+ ED L+ GA L N TP+GM PN +PV L + V DAVY+P
Sbjct: 179 GARVAKSVEDALD-----GATGLVNGTPVGMLPNRG-MPVPAALLHEKLWVADAVYSPLI 232
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
T LL A+ GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQERGAKIMTGRELAIYQAADAFELFTGLAPSTEVMGE 276
>gi|304316729|ref|YP_003851874.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778231|gb|ADL68790.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 283
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
H+NA T ++G+I P+GHS P +HN F VN N +YV V ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPFIHNAAFESVNLNSVYVSFDVHEENLKDAILGIKALGI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+KE VMK+ D + A+ I AVNTI + ++G L GYNTD +T +++
Sbjct: 62 KGINVTVPHKENVMKYLDYISDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESL 115
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 344
KE + G+ V+ GAGGA RA+A G G + ++I + E+A++L++
Sbjct: 116 KEHDI---------VVEGKNAVILGAGGAARAVAVGLSLTGVKSIMIANRSKEKARNLSN 166
Query: 345 DV-----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
+ + D LN Q E+ IL N T +GM P+ + PV E + V+D +
Sbjct: 167 YIKNNLGINCIDVTYDDLN-QLEEIDILVNVTSVGMFPDINLSPVDESIAVKAKFVYDII 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
Y P KT+LL AE ++G +M + QA F ++TG F + I+L
Sbjct: 226 YNPEKTQLLSYAEKHSIRNLNGFDMLINQANHSFKIWTG----MNFNKNIIL 273
>gi|78185871|ref|YP_378305.1| shikimate 5-dehydrogenase [Synechococcus sp. CC9902]
gi|78170165|gb|ABB27262.1| shikimate dehydrogenase [Synechococcus sp. CC9902]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFR--HVNYNGIYVPMFVDDLKKFFSTYSSPDFA 226
IN DT + GL+ PV HS P +HN + +N++ + +P ++LK+ + +
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLALPCASENLKEVLQGLRAVNCR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAI 285
G +V P+K+ V + C E+ PLA+ + AVNT+I P D G G NTD E +T + +
Sbjct: 62 GLNVTIPHKQDVAELCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGE-- 117
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLAS 344
+ ++N + + G GG+ RA+A G +S R + + + E + +
Sbjct: 118 -QSSWQNCHGA-----------IIGCGGSARAIAAGLQSLRLSSITVIGRRQEALDAFIA 165
Query: 345 DVMGAARPFEDILNFQPE------KGAILANATPLGM--HPNTDRVPVSEET---LRDYQ 393
D+ P L P+ + ++ N TP+GM H + P+ E L++
Sbjct: 166 DLQRKDAPLTACLQSSPDLASLMKRADLVVNTTPVGMAQHGDAQAFPLGEAIWSHLQESA 225
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVLA 452
+++D VYTPR T L+ ++ G + G+EM ++Q L++ + + P E MR A
Sbjct: 226 MLYDLVYTPRPTAWLRWGQSRGHRCIDGLEMLVQQGAASLRLWSDRNDVPVETMRRAAEA 285
Query: 453 KF 454
Sbjct: 286 AL 287
>gi|253578605|ref|ZP_04855877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850923|gb|EES78881.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
+ +I T + L+ PV HS P++HN +FR + + +Y+ V++ L + +
Sbjct: 1 MNNITGHTGLTALLGSPVAHSISPLMHNESFRLLGLDYVYLCFDVNEETLPAAVAGLKTC 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
GF++ P K +++ DE+ P AQ I AVNT++ +GKLIGYNTD + ++ D
Sbjct: 61 GIRGFNLTMPNKNKIVELLDELSPEAQLIGAVNTVLN--DNGKLIGYNTDGYGFMQSVRD 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFER---- 338
A G + G+ + G GGA A+ A A A V IF R
Sbjct: 119 A-------------GHDITGKNITVMGVGGASMAICAQSALDGAASVHIFARRTSRYWNR 165
Query: 339 ----AKSLASDVMGAARPFED----ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR 390
A++L++ F++ L + +L NAT +GM P+ D + + +L
Sbjct: 166 TQKFAENLSAKTGCQVCLFDNDDHTALRDSIAQSYLLINATSVGMVPDIDDTIIKDTSLF 225
Query: 391 DYQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+LV D VY P++TRLL++A+A G +G+ M L Q F ++TG+E P ++E
Sbjct: 226 HPELVVADVVYEPQETRLLREAKATGCQTFNGMYMLLHQGAKAFQIWTGQEMPVSVIKE 284
>gi|406927177|gb|EKD63250.1| hypothetical protein ACD_51C00313G0006 [uncultured bacterium]
Length = 257
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 27/278 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K FG+++ P GHS P +H F+ + + +Y V +DL+ F G +V
Sbjct: 2 KKFGILAHPAGHSLSPKMHKAAFKTLKVSAVYEAFDVKPNDLEDFMKNLHEKHVDGLNVS 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYK VM++ + P+A+ I AVN I ++ +GK G N D + I ++
Sbjct: 62 MPYKTEVMQYLAGIDPVAKKIGAVNCIYKK--NGKYHGTNYDWKGIIEPLKKI------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+PL G+ +L GAGGA +A +G K GA+V I + FE AK LA A
Sbjct: 113 -------TPLKGKKVLLLGAGGAAKAACYGLKKEGAKVFILNRTFESAKHLADQYGFKAT 165
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
+ F PE I+ N T +G N + P++ +D ++V D +Y KTR +KDA
Sbjct: 166 ---ETAEFMPE---IVINCTSVGFD-NPEESPINPRVFKDVKIVLDIIYG-HKTRFVKDA 217
Query: 412 EAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
AAG I++G+E+ L Q + G +APKE MRE
Sbjct: 218 RAAGVPYIITGLEVLLYQGYATLEKWLGVKAPKEVMRE 255
>gi|154506092|ref|ZP_02042830.1| hypothetical protein RUMGNA_03634 [Ruminococcus gnavus ATCC 29149]
gi|336433440|ref|ZP_08613260.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153793591|gb|EDN76011.1| shikimate dehydrogenase [Ruminococcus gnavus ATCC 29149]
gi|336016371|gb|EGN46158.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 287
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 30/299 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
++ I T + GL PV HS P++HN +F H+ + +Y+ V D L +
Sbjct: 1 MKQITGHTGLTGLFGSPVAHSISPMMHNASFEHLGLDYVYLAFDVGTDKLAAAVDGLRAM 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ GF++ P K + + CD + P A+ AVNT++ +G L G+ TD + A +D
Sbjct: 61 NVRGFNLTMPDKNKMCELCDRLSPAAEISQAVNTVVN--DNGILTGHTTDGTGYLLAAKD 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERA 339
A G L G+ L GAGGA ++ A G + + +F I + RA
Sbjct: 119 A-------------GYDLIGKKMTLLGAGGAATSILVQAALDGLSEISVFSIHDQFYVRA 165
Query: 340 KSLASDVMGAAR------PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 391
+ + + FED IL + IL N T +GM PNTD +++ +
Sbjct: 166 EQIVQTLNERTNCKVQLFDFEDDSILRREIADSYILTNGTSVGMAPNTDASIINDPSFFH 225
Query: 392 YQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
L+ D +Y P++T+LL+ A AG +G+ M L Q F L+TG+E P E ++E+
Sbjct: 226 KDLIVSDVIYNPKETKLLRLAREAGCPTFNGLYMLLYQGAEAFKLWTGQEMPVEKIKEL 284
>gi|145577945|gb|ABP82691.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
graciosensis]
Length = 238
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 243
S P++HN F H++ + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLSMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 244 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 303
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 304 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLTDVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 363 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 419
+ I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 420 SGVEMFLRQ 428
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|418616268|ref|ZP_13179193.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
gi|374821094|gb|EHR85161.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
Length = 269
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP++ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVYQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|334127717|ref|ZP_08501620.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
gi|333388853|gb|EGK60023.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
Length = 288
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSP 223
++ I TK+ G++ P+GHS PI+ N R + +Y +P+ D L
Sbjct: 1 MQMITGKTKLLGVLGAPIGHSLSPIIQNEALRAAGLDYVYAALPVRADALTSAVHGLRDA 60
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
AGF+V P+K ++ D++ A+ I AVNT++ +G+L+G+NTD
Sbjct: 61 GIAGFNVTIPFKTEIIPLMDDLSEDARRIHAVNTVVVE-ENGRLVGHNTDVT-------- 111
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 343
G+ G A G LAG+ VL GAGGA RA+ +G G +V+ + + +
Sbjct: 112 -----GFLAGFAERGIALAGKKAVLIGAGGAARAVLWGLLRSGVSLVVIGVRSAQKGAAL 166
Query: 344 SDVMGA-----ARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLV 395
+ A A F+D F G+ I+ TPLGM P+ +P V ++ +
Sbjct: 167 AADFAADGDVRAYAFDDP-AFTSALGSADIIVQTTPLGMTPHVGEMPPVDVAAIKSSAVF 225
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+D +YTP +TR L+ A A G ++G M + Q F L+TG E M+ ++
Sbjct: 226 YDLIYTPAETRFLRAAAAHGHETINGETMLVAQGAEAFFLWTGVRPDMELMKRVL 280
>gi|392530088|ref|ZP_10277225.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum ATCC
35586]
Length = 289
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 30/302 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E ++ T++ GL++ P+ HS P +HN F + + Y+ V D L+ +
Sbjct: 3 ERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRALG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G ++ P K+ V K+ D++ P+A+ + AVNTI+ +G L G+ TD +
Sbjct: 63 MRGSNISMPNKQVVTKYLDKLSPVAEMVGAVNTIVN--DNGILTGHITDGTGFM------ 114
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD------IDFE 337
RG K S + G + GAGGA A+ A G + + IF+ + E
Sbjct: 115 ---RGLKQSDVS----IIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNAE 167
Query: 338 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
R +L ++ D+ L Q + I NAT +GM P + +++ T LR
Sbjct: 168 RTVALINEKTDCKATLYDLKDQESLRQQIAESVIFTNATGVGMKPLQEESLITDPTMLRK 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY P +T+LLK A+ G V+G+ M L Q F ++TG+E P E++RE++
Sbjct: 228 ELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELLF 287
Query: 452 AK 453
K
Sbjct: 288 EK 289
>gi|387761673|ref|YP_006068650.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
gi|339292440|gb|AEJ53787.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
Length = 285
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA---KSRGARVVIFDIDFERAKSL 342
G+ +F SP + +L GAGGA +A+ A ++ V + ++AK
Sbjct: 109 --FGFFASLKNF-SPRDAHLTIL-GAGGAAKAIVTQAVLDDAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCQLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|169344492|ref|ZP_02865461.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
gi|169297412|gb|EDS79521.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
Length = 271
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPDIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|291545243|emb|CBL18352.1| shikimate 5-dehydrogenase [Ruminococcus champanellensis 18P13]
Length = 281
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 232
++ +GLI P+GHS P LH F + Y + + + G++V
Sbjct: 2 SEAYGLIGHPLGHSMSPFLHKALFALGGKDASYRLLDLAPETMEQQVQDMTGYLGWNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
PYKE ++ D + P A AVN + R P DG L GYNTDC + A+ D
Sbjct: 62 PYKERIIPLLDRLDPSAARYNAVNCVRREP-DGTLTGYNTDCTGFLHAVRD--------- 111
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK--SLASDVMGA- 349
L GR+ +L G GGAGR +A A + GA++ I + E+ + +LA+ + A
Sbjct: 112 ------FSLGGRVLLL-GCGGAGRMMATEAATAGAQLTIGVRNPEKPELTALAAHLRKAY 164
Query: 350 ------ARPFEDIL-NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
PF +I +F +L N+TP+GM P+T+ PV + +R VFDA+Y P
Sbjct: 165 PAAGVQLLPFGEISGDFD-----LLLNSTPVGMFPHTEGCPVPDAVIRRCGAVFDAIYNP 219
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+TRL++ A AG V G++M ++QA ++ G +
Sbjct: 220 EQTRLMELARQAGIPTVGGMDMLVQQAACAQEIWYGAQ 257
>gi|333910252|ref|YP_004483985.1| shikimate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750841|gb|AEF95920.1| Shikimate dehydrogenase [Methanotorris igneus Kol 5]
Length = 283
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 154/291 (52%), Gaps = 23/291 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++LK +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLKYVIDGAKAMGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ A+ I AVNTI + + K +GYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDENAKLIGAVNTI--KIENNKAVGYNTDGLGARMALEEEI- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
G + + ++ GAGGA RA+AF ++ ++I + E+AK+LA ++
Sbjct: 119 -----------GKKVENKNIIIYGAGGAARAVAFEL-AKNNNIIIANRTVEKAKNLAEEI 166
Query: 347 MGAARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 400
E+ + + I+ NATP+GM+PN D P V E + +V D +Y
Sbjct: 167 REKLNKTEEEVKYSGLDANLDGIDIIINATPIGMYPNVDVKPIVKAEQMHKDMVVMDLIY 226
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
P +T LLK+A+ AGA ++G+ M + Q F ++T ++ E M+ ++
Sbjct: 227 NPLETVLLKEAKKAGAKAINGLGMLIYQGAIAFEIWTNEKPNIEVMKNAII 277
>gi|428180770|gb|EKX49636.1| hypothetical protein GUITHDRAFT_67756, partial [Guillardia theta
CCMP2712]
Length = 1505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 205/458 (44%), Gaps = 36/458 (7%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE- 70
GG + G E + L L L LG ++VD E S + K + +R + S + E
Sbjct: 1052 GGKFAGSEEEMLALLQLGLRLGCEFVDVE-SCWSTAMCKAVVDKKGSSRVVASFHDFSER 1110
Query: 71 --TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIA----RIFQLLSHCQVPIIAYSVG 124
T E + +L RMQ GAD++K+ T++A I + + +P + +G
Sbjct: 1111 AYTAEELEKLFLRLRMQG-GADVVKVAIRTTKATQVADMQHAINRFRARSSLPAVGLCMG 1169
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPV 183
E G +S++L+ KF + L GT G E +R+ KVE + T F L P+
Sbjct: 1170 EEGKLSRVLN-KFLTFSTHPLLPGTAAPGQLVAEDIRR-LKVELGLLPATCSFFLFGSPI 1227
Query: 184 GHSKGPILHNPTFRHVNYNGI-YVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
S P +HN F G Y D+ T SS F G SV P KE ++
Sbjct: 1228 AKSASPAMHNAAFAACGLKGWSYERCETADVSVALETISSASFGGGSVTIPLKEELLPHM 1287
Query: 243 DEVHPLAQAIAAVNTI-IRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
+ A+ I AVNTI ++R DG LIG NTD A ++D + R G G
Sbjct: 1288 HILTDSARRIGAVNTITVKRGGDGSRILIGDNTDWVAIHRLVQDRLNMRRLAQG----GE 1343
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKS-RGAR--VVIFDIDFERAKSLASDVMGAARPFEDI 356
P +L GAGG RA + K RG V++++ RA++LA++ A ED
Sbjct: 1344 P----RVLLVGAGGTARAAMYALKKLRGITGPVLVYNRTKSRAEALAAEF--GAEVVED- 1396
Query: 357 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 416
L+ + G I++ P G + E L+ ++ DA Y P T L + A AAG
Sbjct: 1397 LSSVTQLGVIVSTIPPDG------HAVIPETLLQARPIMLDASYLPGGTSLSQRAAAAGC 1450
Query: 417 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++ G M QA Q +TG++A + M + + + F
Sbjct: 1451 DLIIGPHMLFEQATYQSERWTGRKARRSVMAKAICSHF 1488
>gi|168217169|ref|ZP_02642794.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
gi|182380759|gb|EDT78238.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
Length = 271
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|148257367|ref|YP_001241952.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146409540|gb|ABQ38046.1| shikimate dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 293
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 231
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD G++
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTT-------------GFE 119
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
A S L GAGG G+A+AF A A + I+D + RA+ LA + +
Sbjct: 120 RAVAPLLSQTGRGAVALIGAGGVGKAIAFALANLNVAGLRIYDTERARAERLARLLPAST 179
Query: 351 RPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
D + + A + N TP+GM PN PV + LR V DAVY+P T LLK
Sbjct: 180 GAVVVDSVERALQGAAGVVNGTPIGMLPNRG-TPVPDHLLRTDLWVADAVYSPLWTPLLK 238
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 239 AAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|377832060|ref|ZP_09815024.1| shikimate 5-dehydrogenase [Lactobacillus mucosae LM1]
gi|377554067|gb|EHT15782.1| shikimate 5-dehydrogenase [Lactobacillus mucosae LM1]
Length = 301
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 144/298 (48%), Gaps = 31/298 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK--KFFSTYSSPDFA 226
+N T + GL++ P+ HS P +HN F + N Y+ +D+ K K + D
Sbjct: 14 LNGHTILIGLMADPIRHSMSPTMHNNAFAKLGLNYAYLCFEIDNQKLPKAIDAIRTLDMR 73
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K+ V+ + D + A+ AVNTI+ G L GY TD + +++D
Sbjct: 74 GSNISMPNKQKVIPYLDRLDESAELCQAVNTIVN--DHGILTGYTTDGIGFMQSLKDE-- 129
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
G + G+ VL GAGGAG +A A G + + +F+ID ++ ++ +
Sbjct: 130 -----------GLDITGQKMVLTGAGGAGTPIAMQAAIEGVKEIALFNIDDDKWENAVRN 178
Query: 346 V---------MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 393
V ED + + E + I +AT +GM P D V + T
Sbjct: 179 VKIINEKTGAHATLHHLEDQADLKKELASCDIYVDATGVGMKPLEDMTLVEDPTWFHQDM 238
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V+D VY PR+T+L++ A+ AG + +G+ M L Q F L+TG++ P E++R ++
Sbjct: 239 IVYDTVYAPRETKLMQVAKQAGVDHVFNGLGMMLEQGAAAFKLWTGQDMPVEYIRNLL 296
>gi|375258961|ref|YP_005018131.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|397655934|ref|YP_006496636.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
gi|365908439|gb|AEX03892.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|394344573|gb|AFN30694.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
Length = 287
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V + LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNETLKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
+KE G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 341 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSIL 286
>gi|404412569|ref|YP_006698156.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|404238268|emb|CBY59669.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
Length = 291
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 145/302 (48%), Gaps = 32/302 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ G +V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGCNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 336
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 337 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 389
E+ S +D ED + E + I NAT +GM P + + + + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPNADML 229
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 450 VL 451
+
Sbjct: 290 LF 291
>gi|409385048|ref|ZP_11237769.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
gi|399207426|emb|CCK18684.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
Length = 272
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 28/284 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 225
IN TK+ +++ P+ HS P +HN F HV NG+Y+ DL + + D
Sbjct: 2 EINGYTKLAAVVANPIKHSLSPFIHNLAFDHVGENGVYLAFETPEADLGSVIESIKTLDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEA + + DE+ +A+ A+NTI+ R DGKL G +TD ++
Sbjct: 62 YGVNLSMPYKEAAVPYMDELSEVAKLTGAINTIVNR--DGKLFGTSTDGAGFFKSL---- 115
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 344
+ +K + G + GAGGA R++ A +GAR + +++ ++ L +
Sbjct: 116 --KHFK---------VKGSTITVIGAGGAARSIIAEAAVQGARQITVYNRTYK--PELFT 162
Query: 345 DVMG--AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
+ G +P D+ G +L N T LGM + +P++ + +D LV D +Y P
Sbjct: 163 NYPGNIVFKPLSDLTELT---GDLLVNTTSLGMDGVSLPIPMALQLPKD-MLVADVIYQP 218
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+T LL A++ G V+G+ M L QA F L+TG E P + +
Sbjct: 219 IETPLLTYAKSQGNSTVNGLGMLLYQAAESFKLWTGHEMPTDII 262
>gi|257884631|ref|ZP_05664284.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
gi|257820469|gb|EEV47617.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
Length = 284
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 340
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 341 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 395 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
VFD +Y PR+T LLK+A+ GA +G+ M + Q F L T ++ P
Sbjct: 227 AVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELCTKEKMP 275
>gi|251780363|ref|ZP_04823283.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084678|gb|EES50568.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 289
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPKMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ D++ P A+ AVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVN--DDGVLTGHITDGIGYMRALKDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAK 340
G G+ + GAGGA A+ A G A + IF D F RA+
Sbjct: 121 -------------GINPIGKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 341 SLASDV---MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRD 391
D+ D+ N K I NAT +GM P + + + + LR
Sbjct: 168 KTVKDINEKTNCKATLYDLANLDKLKEEIADSYLFTNATGMGMKPLEGKTYIPDSSFLRS 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PR+T LL+ A G V+G+ M L Q F ++TGKE P E+M++I+
Sbjct: 228 DLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAAAFEMWTGKEMPIEYMKDIL 286
>gi|206889174|ref|YP_002248270.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226697499|sp|B5YJ55.1|AROE_THEYD RecName: Full=Shikimate dehydrogenase
gi|206741112|gb|ACI20169.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 275
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 29/287 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+ P+ H+ P++HN F ++ + YV V D LK+ + +
Sbjct: 2 ITGKTKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+KE V+++ DE+ + I AVNTI+ ++G L G+NTD I +++D
Sbjct: 62 GVNITVPHKETVIQYIDELSDEVKNIGAVNTILN--NEGILKGFNTDVNGFILSLKDE-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
G + + F++ GAGGA +A+ +G G +V I++ R S A +
Sbjct: 118 -----------GISMKNKNFLILGAGGAAKAIVYGILKEGGKVYIYN----RTPSNALAI 162
Query: 347 MGAARPFE--DILNFQP---EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ F +I+ EK ++ NAT LG+ + D +P++ E ++ + D VY
Sbjct: 163 KEKFKKFGFIEIVEMDKSVTEKIDVIVNATSLGLKKD-DPMPLNPELIKPEHVYCDIVYP 221
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+T L+++AE G +V G+ M L QA F ++T EAP E M++
Sbjct: 222 --ETPLMREAERIGCKVVGGIGMLLWQAAFAFKIWTEVEAPIEIMKK 266
>gi|449109291|ref|ZP_21745927.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
gi|448959099|gb|EMB39821.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
Length = 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSNKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -SENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ D P++ T + VF+ +Y P T++LK A AG + +G +M QA QF +
Sbjct: 427 EPDIDMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKV 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|336366066|gb|EGN94414.1| hypothetical protein SERLA73DRAFT_114628 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378738|gb|EGO19895.1| hypothetical protein SERLADRAFT_363753 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1617
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 210/471 (44%), Gaps = 47/471 (9%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 71
G + E + L+LA +GA+Y+D E+ ++ K SH+ ++ I S + D
Sbjct: 1162 GSFPDKAEKEAFHLLNLAVRIGAEYIDAEISWPEKLI-KDLVSHKGSSQIIASWH-DWTG 1219
Query: 72 PSEEDLGYLVSR--MQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 124
+ + ++ + A DI+K+V N + + ++ +S PIIA ++G
Sbjct: 1220 KMRWNEASVKAKYDIAARFGDIVKIVGKANSVQDNFALYDFVSRVSSASNAKPIIAINMG 1279
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKP 182
G +S++L+ F+ S P P S Q + H+ + + + P
Sbjct: 1280 VEGQMSRILNSTFSPV----SHPLLPTKAAPGQLSYAQIQQALHLLGQLPAQRYFIFGNP 1335
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKK-FFSTYSSPDFAGFSVGFPYKEAVMKF 241
+ HS P LHN F + Y + D+ + + +SPDF G SV P+K V+
Sbjct: 1336 IAHSMSPTLHNTGFEVLGLPHTYQLLETTDVGEGIKAALASPDFGGASVTIPFKLDVIPL 1395
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTAS 296
D++ P A+AI AVNTI+ R +D L G NTD I ++++ R +
Sbjct: 1396 LDQLSPAAEAIGAVNTIVPRLADASGTNRILYGDNTDW----LGIVESVRSRA-----PA 1446
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARPFED 355
G+P A ++ GAGG RA F K+ GA+ + +++ +A+ L A +
Sbjct: 1447 LGAPQAA---LVIGAGGTARAAIFALKALGAQHIYLYNRTAGKAQILVDAFPDAHVELVE 1503
Query: 356 ILNFQPEKG--------AILANATPLGMHPNTDRV--PVSEETLRDYQLVFDAVYTPRKT 405
L P +G + A+AT + D V PVS + +V D Y P +T
Sbjct: 1504 RLGIWPGEGLVPSVVVSTVPASATTT-EEGSADAVFLPVSIFDAKLEGVVVDMAYKPAET 1562
Query: 406 RLLKDAE--AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL A+ A V GVE+ L Q QF +TG+ PK + E VL K+
Sbjct: 1563 PLLALAKRVAPNWATVRGVEVLLEQGYVQFETWTGRRCPKHVVAERVLEKY 1613
>gi|357010654|ref|ZP_09075653.1| shikimate 5-dehydrogenase [Paenibacillus elgii B69]
Length = 289
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++G+ P+ HSK PI+ N F N Y + LK + + F
Sbjct: 6 LDSHTILYGVFGDPIRHSKSPIMLNRAFEAAGINAAYGAFHILPGTLKDAVAGIRALQFR 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VM + DE+ A AI AVNTI+ G+LIGYNTD + ++ +
Sbjct: 66 GVNVTIPHKVEVMSYLDEIDEGAHAIGAVNTIVNE--GGRLIGYNTDGIGYMRSLREET- 122
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G L GR ++ GAGGA R + + GA + I + E+A LAS
Sbjct: 123 -----------GISLKGRKVLMIGAGGAARGVGYALAREGAEHIYIANRTKEKALDLASS 171
Query: 346 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + ++I E A++ N T LGMHPN D VP+ +R +V D VY
Sbjct: 172 MSEFGSVSGHGLDEISKLAGE-AALIVNNTLLGMHPNVDEVPMDISLIRPETVVSDLVYN 230
Query: 402 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P TR L++A + GA+I SG+ MF+ Q F +TG+ AP MRE+V F
Sbjct: 231 PLITRFLREARDQRGAVIHSGLGMFIYQGAYAFEYWTGQPAPIAAMREVVEQSF 284
>gi|337748424|ref|YP_004642586.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
gi|336299613|gb|AEI42716.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
Length = 299
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 23/294 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 346 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ G + ++I + A++ N T +GM+PN D VP+ +R+ Q+V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGD-AALIVNNTLVGMYPNVDEVPMDISLIREDQVVSDLIYN 236
Query: 402 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREMRGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|170078337|ref|YP_001734975.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7002]
gi|169886006|gb|ACA99719.1| shikimate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 287
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 29/292 (9%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 230
TK+ G+I PV HS PI+HN + + +Y+ P+ LK + + D GFS+
Sbjct: 7 TKLLGVIGDPVKHSFSPIMHNAAIAELGVDYVYLAFPVAAAALKAALDGFWAIDLQGFSI 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K+A+M + + P A+ + AVNT+ R + + G NTD + ++ ER +
Sbjct: 67 TIPHKQAIMAHLEAIAPEAELVGAVNTVWRTETGWQ--GTNTDVAGFVAPLQAL--ERDW 122
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGA 349
N T V+ G GGA RA+ G G ++ + D E+ +
Sbjct: 123 SNVTP-----------VILGNGGAARAVVVGCHQLGCPQIHVLGRDPEKLAQFSESWQNT 171
Query: 350 -------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLVFDAV 399
+ D P+ +L NATP+GM P D PVS+E + + + +D +
Sbjct: 172 PLAGKVQTHLWGDRQRLIPQ-AQLLINATPIGMFPKVDASPVSDELMANLPPGAIAYDLI 230
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
YTP T+ LK A+ GA I+ G EM ++Q + G+ P + MR+ +L
Sbjct: 231 YTPSPTQFLKQAQTQGAAIIDGSEMLVQQGAIALEKWLGQPVPVDTMRQALL 282
>gi|403384196|ref|ZP_10926253.1| shikimate dehydrogenase [Kurthia sp. JC30]
Length = 277
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K + +I P+ HS P++HN +G Y+P+ + ++L + F+ +GF+V
Sbjct: 3 KWYAVIGDPIEHSMSPLMHNTWMNAEERDGTYIPLHITKENLVEGFNGMKLLGCSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ D++ PLAQ + AVNT++R+ DG GYNTD + ++EDA+
Sbjct: 63 IPHKEAIIPLLDDIDPLAQKMGAVNTVVRQ-LDGTYKGYNTDGLGFVKSLEDAV------ 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS--DVMG 348
G+ + ++ GAGGA R + F G ++ I + +A+++ DV+
Sbjct: 116 ------GTHHKDKRVLVIGAGGASRGICFALAQEGYTKLSIANRTVAKAQAICDELDVVA 169
Query: 349 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
A E+ E G I+ T G++ + +P+S E L + +V D VY P T L
Sbjct: 170 TAYSLEEAAASLDEFG-IIIQTTSAGLNNSAFSLPLSLEKLSNTAIVADIVYNPLMTPFL 228
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++ GA +V+G+ MF+ Q ++ + + ++ ++L +
Sbjct: 229 AQSQQKGATVVTGLGMFIHQGALAYSYWNDVYPTADTVKPVLLEQL 274
>gi|188997216|ref|YP_001931467.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932283|gb|ACD66913.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 279
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 31/294 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ +T V+G+ PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGIFGYPVKHSKSPTFQTAAFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ G +AG+ ++ GAGG+ RA+ +G ++GA ++ + + +RA++L D
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGAGKIYLANRTIQRAENLIED 167
Query: 346 VMGAARPFEDILN-FQPEKGAILANATPLGMHPNTDRVPVSEE--TLRDYQL------VF 396
R + I+ E+ + N L + NT V ++E+ + DY L V
Sbjct: 168 FSNFYRIVKMIIKPISLEEINRILNEVELIV--NTTSVGLNEDDPEIFDYNLINSSHTVV 225
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
D +Y ++T+LL+ A+ A +G M + Q F ++TGK AP E M++ +
Sbjct: 226 DIIY--KETKLLRKAKEKNAKYQNGYPMLIYQGAKSFEIWTGKPAPIEVMKKAI 277
>gi|89100813|ref|ZP_01173665.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89084459|gb|EAR63608.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 279
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 141/275 (51%), Gaps = 29/275 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+F +I P+GHS P +HN F + YVP+ V +DL + AGF+V
Sbjct: 3 KLFAVIGDPIGHSMSPAMHNDLFGIYGLDACYVPLKVRREDLGDAVKGLRAIGVAGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M F DE+ LA+AI AVNT++ + DGKLIGYNTD E GY
Sbjct: 63 VPHKTEIMPFLDEIDQLAEAIGAVNTVLNK--DGKLIGYNTDGE-------------GYV 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G AS + + ++AGAGGA +A+ + +G + ID + ++ +
Sbjct: 108 RGLASEVPDFSRKKILIAGAGGAAKAIYYTLAQKGVQA----IDICNRTAAKAEALADKC 163
Query: 352 PF---EDILNFQ--PEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
PF D L FQ EK A I+ TP+GM P+ + +P L+ V D +Y P
Sbjct: 164 PFPVRTDALGFQQAEEKLAEYDIIIQTTPIGMLPDVNALPFGLYNLKAGAFVSDIIYNPL 223
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
+T+ L++A+ GA I +G++MF+ Q F +TG
Sbjct: 224 ETKFLREAKNKGASIQNGLKMFVCQGALAFERWTG 258
>gi|357512133|ref|XP_003626355.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Medicago truncatula]
gi|124360141|gb|ABN08157.1| 3-dehydroquinate dehydratase, putative [Medicago truncatula]
gi|355501370|gb|AES82573.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Medicago truncatula]
Length = 99
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 76/87 (87%), Gaps = 2/87 (2%)
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 359
PL GR+FV AG GAG+ALAFGAK+RGAR+VIFDIDF++++SLA V G + +++++NF
Sbjct: 9 PLDGRLFVRAG--GAGKALAFGAKTRGARIVIFDIDFDKSRSLACAVFGEVQSYKNLVNF 66
Query: 360 QPEKGAILANATPLGMHPNTDRVPVSE 386
QP KGAILANATP+GMHP+TDR+PV+E
Sbjct: 67 QPVKGAILANATPIGMHPDTDRIPVAE 93
>gi|57640200|ref|YP_182678.1| shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
gi|73914165|sp|Q5JFT1.1|AROE_PYRKO RecName: Full=Shikimate dehydrogenase
gi|57158524|dbj|BAD84454.1| Shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
Length = 272
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 23/281 (8%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAG 227
+A+T+++G+I P HS P++HN FR + N +Y+ V ++L + + +G
Sbjct: 3 DAETRLYGVIGFPARHSLSPVMHNAAFRALGINAVYLAFEVPPEELGEAIGGAKALGISG 62
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
+V P+KEAV+ F D + + I +VNT++ R G+L G+ TD + A+E AI+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGRLEGHTTDGLGARRALERAIE- 119
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DV 346
L GR ++ GAGGAG+A+A+ SR VV+ + E+AK+L +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSRDNEVVVLNRTPEKAKALERFGI 165
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
G A E++ + E +L NAT +GM N+ PV E LR +V D VY P KTR
Sbjct: 166 TGDALNRENLGEYL-EWAEVLINATSVGM--NSWETPVPAELLRRDLVVMDIVYKPLKTR 222
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LL +AE G V G+ M + Q I F L+TG + + MR
Sbjct: 223 LLTEAELRGCKTVDGLWMLVYQGIESFRLWTGFKPDEGLMR 263
>gi|415885593|ref|ZP_11547521.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
gi|387591262|gb|EIJ83581.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
Length = 279
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K+FG+I P+ HS P++HN F + Y P V DL + + +GF+V
Sbjct: 3 KLFGVIGDPISHSMSPVMHNDLFMVYGIDAHYHPFHVKRGDLGAAVQGLKAINCSGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M F DE+ PLA+AI AVNT++ +GKLIGYNTD + ++ +
Sbjct: 63 VPHKTEIMTFLDEIDPLAEAIGAVNTVVHE--EGKLIGYNTDGHGFLEGLK--------R 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 350
T S + + ++ GAGGA +A+ + G + IDF R A+ ++ +
Sbjct: 113 KFTVSDSTKV-----LIIGAGGAAKAIFYSMAHAGVK----HIDFCNRTAEKAAQLIESC 163
Query: 351 RPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
PF N + A ++ T +GM PN D P+S E L V D +Y P
Sbjct: 164 -PFTVQSNIYTREEAEKRLSSYNLIIQTTSVGMSPNIDDSPLSLENLGTGAFVSDIIYNP 222
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+T +L+DA+ GA +G++MF+ Q F +TG M++ VL
Sbjct: 223 LETAILRDAKRRGAGTQNGLDMFVFQGALAFEKWTGIFPDTVRMKQNVL 271
>gi|288800100|ref|ZP_06405559.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
gi|288333348|gb|EFC71827.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
Length = 247
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPY 234
+GLI +GHS N F++ N + +Y+ + +++ F +S PD G +V PY
Sbjct: 4 YGLIGLKLGHSFSLNYFNEKFKNENIDAVYINYEISNIQDIFEIIASNPDLKGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
KE ++ + DEV P A AI AVN II + + L G+N+D +IE + ER +K
Sbjct: 64 KEQIIPYLDEVTPEATAIGAVNVVKIIHQENKTILKGFNSDVVGFTQSIEPLL-ERVHKK 122
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
++ G GG+ +A+AFG +S G V+ R + A
Sbjct: 123 A-------------LILGTGGSAKAIAFGLESLGLEVLFVS----RTPQV------NAIT 159
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDA 411
+ ++ ++ ++ N TPLGM+PN+D P + E + L++D +Y P +T +K
Sbjct: 160 YNEVTEATIKEYKVIVNCTPLGMYPNSDSYPELPYEAMDSSHLLYDLIYNPNETTFMKKG 219
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
GA + +G+EM L QA + + GK
Sbjct: 220 AMHGATVKNGLEMLLLQAFVSWEYWHGK 247
>gi|449123706|ref|ZP_21760028.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
gi|448943959|gb|EMB24841.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
Length = 493
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -AENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ D P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIDMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|420177912|ref|ZP_14684246.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
gi|420181401|ref|ZP_14687602.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394246317|gb|EJD91577.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394247099|gb|EJD92347.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
Length = 269
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 32/287 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPFNQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAK--SLASDVM 347
NG + ++ GAGGA + +A K + I + R SL S+ +
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNSNKI 164
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
+ + F I+ N TP GM+ N D V +S L + LV D VY P KT +
Sbjct: 165 NLSHAERHLDEFD-----IIINTTPAGMYGNKDSV-ISLNRLASHTLVSDIVYNPYKTPI 218
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +AE G I +G++MF+ Q F ++T E E M+ +V+ +
Sbjct: 219 LIEAEQKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEAMKNVVIHEL 265
>gi|256851823|ref|ZP_05557211.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260661916|ref|ZP_05862826.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297205445|ref|ZP_06922841.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
gi|256615781|gb|EEU20970.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260547385|gb|EEX23365.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297150023|gb|EFH30320.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
Length = 307
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T + GL++ P+ HS P +HN F + N Y+ +D+ L K + D
Sbjct: 16 LDGHTYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTLDMR 75
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P K+ V+K+ D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 76 GSNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVN--DNGVLTGYTTDGIGFMKSLEDE-- 131
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
G + G+ LAGAGGA +A A G + + IF+++ ++ +
Sbjct: 132 -----------GIDIRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWSQAEKN 180
Query: 346 V---------MGAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEET-LRDYQ 393
V + ED +F+ + I +AT +GM P D V + + +
Sbjct: 181 VKTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDM 240
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VFD VY PR T+L+K A+ AG +++G+ M + Q F L+TG++ P +++R+++
Sbjct: 241 TVFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGAAAFKLWTGEDMPTDYIRQVIF 299
>gi|410466400|ref|ZP_11319313.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409980778|gb|EKO37456.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 274
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 231
++FG+I P+GH+ P++HN F + Y P ++L F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEELPAFMERLRQTPIAGVSVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGY 290
P+K AVM F DEV L QA AVNT+ R DG+LIG NTD E + I R
Sbjct: 62 IPHKTAVMAFVDEVSELGQAAGAVNTLYWR--DGRLIGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
A + A +G G +R FE+A++LA + A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSG------VVGVTAR---------RFEQAQALAREFGVLA 164
Query: 351 RPFEDILNFQPEKGAI----LANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKT 405
P++ E+GA L NATP+GM + V P + L + FD VY P +T
Sbjct: 165 VPWD-------ERGAFGADFLTNATPMGMAGRFEGVSPYPAQALSPGMVAFDLVYNPYET 217
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
RL DA AAG +V G+EMFL QA+ QF L+TG+ P + +R ++L
Sbjct: 218 RLAADAAAAGGTVVPGLEMFLYQAVEQFRLWTGRLLPDDELRPLLL 263
>gi|331266124|ref|YP_004325754.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
gi|326682796|emb|CBZ00413.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
Length = 284
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++KP+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVAKPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVLPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF ++G+ + GAGGA R++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TISGKKMTILGAGGAARSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + K +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDLSELQEKIAKADLLVNATSVGMDGKSSPVPESI-VLPEALLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|168209925|ref|ZP_02635550.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
gi|170711954|gb|EDT24136.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
Length = 271
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D ++A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKDKAFKKFEDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ D+ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGDLEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKNNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|417907932|ref|ZP_12551699.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
gi|341595019|gb|EGS37697.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
Length = 269
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 135/282 (47%), Gaps = 22/282 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + EV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLYEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|449131376|ref|ZP_21767592.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
gi|448940209|gb|EMB21120.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
Length = 493
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -AENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KAYIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ D P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIDMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|414154642|ref|ZP_11410959.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453473|emb|CCO08863.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 294
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 23/298 (7%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
+ IN TKV GL PV HS P +HN + + N +YVP V + L++ +
Sbjct: 3 LPEINGKTKVCGLFGWPVEHSFSPAMHNAAYAGLGLNWVYVPYSVPPNCLRQAVEGMRAL 62
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
AG +V P+K++++ D+V A+ + AVNT+ R GKL+GYNTD I
Sbjct: 63 GLAGANVTVPHKQSIIPLLDKVDTAARIMGAVNTV--RLEQGKLVGYNTDGPGFIQ---- 116
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 343
+ A+F SP R+ ++ G A A + A + I + E+A+ LA
Sbjct: 117 ------FLAAEANF-SPQGKRVLLVGAGGAARAVAVALAGAGAAAIYITNRTPEKAEQLA 169
Query: 344 SDVMGAARPFEDILNFQPE-KGAILA------NATPLGMHPNTDRVPVSEET-LRDYQLV 395
DV A + +L + + G ++A TPLGM +D+VP T L+ QLV
Sbjct: 170 RDVAQAGQLTTRVLPWGRQLPGTVVAEVDLVIQTTPLGMGARSDQVPEFPFTALQPGQLV 229
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
D +Y P +T L+ A A GA + +G+ M L Q + F L+TG AP MRE +L +
Sbjct: 230 CDLIYNPNRTLFLQMAAARGATVFNGLGMLLYQGVLAFELWTGLPAPVAIMREALLKQ 287
>gi|428780823|ref|YP_007172609.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
gi|428695102|gb|AFZ51252.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
Length = 325
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 34/296 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++ N + + +YVP+ V DL + + +++ D
Sbjct: 24 ITGKTKLLGVIGDPVEHSLSPVMQNAALNELGLDYVYVPLPVKKGDLNRALAGFTAIDLV 83
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+ P+K+A++ D + P AQ + AVNT+ R ++ G NTD + I +
Sbjct: 84 GFNATIPHKQAIIPLLDRITPEAQKVGAVNTVWR--TEKGWEGTNTDVDGFIAPLIPL-- 139
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKS---- 341
+R + M V+ G GGA RA+ G + G ++V + + E+ +
Sbjct: 140 DRDWSQ-----------VMPVILGNGGAARAVIVGCEKLGCSKVAVVGRNREKLEQFQRS 188
Query: 342 -----LASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQ 393
L +++ ++D+ N + +L N TP+GM P + PV L+ +
Sbjct: 189 WEETGLKTEI--CPYSWQDLPNLL-SQTQLLVNTTPIGMSPQIESSPVEATALKHLPNGA 245
Query: 394 LVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V+D +YTPR TR L+ A+ G + G+EM ++Q + + P E MRE
Sbjct: 246 IVYDLIYTPRPTRFLQLAQQLGEYTTIDGLEMLIQQGAIALETWLEQPIPIEVMRE 301
>gi|392407617|ref|YP_006444225.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
gi|390620753|gb|AFM21900.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
Length = 290
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFA 226
N DT+ L P+ + P+LHN F N +Y P+ + DDL K T +
Sbjct: 5 NVDTRFIALYGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSFDDLSKALKTMHVFNVI 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE V++ D + A+ AVNT++ ++ LIGYNTD + + +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTVVT--TEKGLIGYNTDGMGFLNSFME--- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
F G+ F+L GAGGA +A+ F + G ++V++++ RA SL
Sbjct: 120 ---------EFNVSPEGKTFLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLLER 170
Query: 346 V------MGAARPFEDILNFQP------EKGAILANATPLGMHPNTD-RVPVSEETLRDY 392
V RP LN +P + I+ NAT +GM + + V ++ R
Sbjct: 171 VEKFFPGKCEWRP----LNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPG 226
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
Q V D VY P +T+LL DA+ AG I+SG M + QA F L+ G ++ E M+
Sbjct: 227 QFVCDVVYNPPETKLLADAKKAGCKILSGDGMLVYQAAAAFKLWFGIDSDVELMK 281
>gi|359410713|ref|ZP_09203178.1| Shikimate dehydrogenase [Clostridium sp. DL-VIII]
gi|357169597|gb|EHI97771.1| Shikimate dehydrogenase [Clostridium sp. DL-VIII]
Length = 270
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
+GL + + HS P +HN F+ N G Y V ++L K G +V P
Sbjct: 4 YGLFGEKLSHSLSPKIHNNFFKASNIEGAYKLFEVKKEELGKAVEAIKVLKVKGVNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YK+ VMK+ D + AQ I A+NTI +GKL GYNTD T I KN
Sbjct: 64 YKQDVMKYLDFISEEAQKIGAINTI--HLDNGKLYGYNTDYFGFGTII---------KNN 112
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA--- 350
+ +A ++ G GGA +A+ +G + + R KS++SD
Sbjct: 113 SIEIKDNIA----MVLGNGGAAKAVITYLLDQGIKKIYL---VSRRKSISSDYNDEKIEI 165
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ +E+I + KG IL N TPLGM+PN D PV E+ + ++ + D +Y P++T+ LK
Sbjct: 166 KTYEEIGDI---KGDILINTTPLGMYPNVDATPVDEDIINNFNTLIDIIYNPKETKFLKI 222
Query: 411 AEAAGAIIVSGVEMFLRQAI 430
+ + G+EM + QAI
Sbjct: 223 GKKLSKKVCGGIEMLIGQAI 242
>gi|449115970|ref|ZP_21752430.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
gi|449119976|ref|ZP_21756363.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|449122373|ref|ZP_21758713.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948129|gb|EMB28967.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948596|gb|EMB29430.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|448955456|gb|EMB36223.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
Length = 493
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSNKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -AENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ D P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIDMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|449128721|ref|ZP_21764967.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
gi|448941129|gb|EMB22033.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
Length = 493
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 162/363 (44%), Gaps = 28/363 (7%)
Query: 89 ADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSV-GERGLVSQLLSPKFNGALVYGSL- 146
DI KL F+ N + +I+ +F+ Q SV G GL S++LS + N +VY
Sbjct: 146 TDIPKLAFTANCLNDISELFKASKLIQNQEYILSVMGPYGLSSRILSKQLNSQIVYTFTP 205
Query: 147 ----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 202
K L E+L + Y I+ DT+++G+I K V S P +HN F N N
Sbjct: 206 EYIKKNKLEQELIDPETLEELYGFSKIDNDTRLYGVIGKDVNTSLSPQIHNKGFEQKNLN 265
Query: 203 GIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRP 262
+Y+P+ K+ + + G SV P+K ++ + + ++ I AVNT+I
Sbjct: 266 SVYIPISAVSSKEALDFANFLNIKGLSVTAPFKSEIIPQINSISEASKFIGAVNTLINE- 324
Query: 263 SDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRALA 319
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 325 -NKKWFGYNTDVDGFQQALIEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG------ 377
Query: 320 FGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGMHP 377
+ IF+ E+AK++A + D +N + ++ T GM P
Sbjct: 378 --------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGMEP 428
Query: 378 NTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
+ D P++ T + VF+ +Y P T++L+ A AG + +G +M QA QF F
Sbjct: 429 DIDMDPLNFYTFTGKEKVFELIYRPETTKMLQRARTAGCQVCNGYKMLEYQAYHQFKAFA 488
Query: 438 GKE 440
GKE
Sbjct: 489 GKE 491
>gi|306521064|ref|ZP_07407411.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-32g58]
Length = 273
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 139/283 (49%), Gaps = 31/283 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 337
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 338 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 434
+V D VY P+KT++++DAEA G + G+ M L Q FN
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFN 269
>gi|87123368|ref|ZP_01079219.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
gi|86169088|gb|EAQ70344.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
Length = 306
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 163 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTY 220
T K NA T + GL+ PV HS P++HN + N I++ P +DL+
Sbjct: 6 TAKPTTANAQTALVGLLGDPVHHSLSPVMHNAALEAMGLNWIFLALPTPANDLETVVRGL 65
Query: 221 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 280
+ G +V P+K +V+ C E+ PLAQ + AVN ++ R DG G NTD E I
Sbjct: 66 RAVGCRGLNVTIPHKHSVVPLCAELSPLAQRLGAVNALVPR-VDGGWFGTNTDVEGFIAP 124
Query: 281 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK 340
+ +A + GR ++ G GG+ RA+ S G + I R
Sbjct: 125 LREAQSD-------------WQGRRALVLGCGGSARAIVAAITSLGCDQI--QIAGRRPD 169
Query: 341 SLAS--DVMGAARPFEDILNFQPEKGA--------ILANATPLGMHP--NTDRVPVSEET 388
+LA+ GA P L++ + ++ N TPLGM N D V S +
Sbjct: 170 ALAAFQQDCGAWAPSLTGLDWHHQAALEQALEAADLVVNTTPLGMASTHNPDAVLASPLS 229
Query: 389 LRDYQ------LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EA 441
D Q V+D +YTPR TRLL DA A G + G+EM ++Q L++ + +
Sbjct: 230 PGDIQRLKPECWVYDIIYTPRPTRLLTDAAAHGCRTLDGLEMLVQQGAAALRLWSERSDV 289
Query: 442 PKEFMRE 448
P MR
Sbjct: 290 PVAVMRH 296
>gi|223933656|ref|ZP_03625634.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|302023999|ref|ZP_07249210.1| shikimate 5-dehydrogenase [Streptococcus suis 05HAS68]
gi|330833048|ref|YP_004401873.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|386584438|ref|YP_006080841.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
gi|223897686|gb|EEF64069.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|329307271|gb|AEB81687.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|353736584|gb|AER17593.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
Length = 289
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ + D++ A+ I AVNT+I + DGKLIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDDLTASARLIGAVNTVIHK--DGKLIGHNTDGIGFFKSLE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 341
+ +G++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 RLKGFQ---------VKNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 342 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 392
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|384495000|gb|EIE85491.1| hypothetical protein RO3G_10201 [Rhizopus delemar RA 99-880]
Length = 1571
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 197/463 (42%), Gaps = 44/463 (9%)
Query: 11 AGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
AG + DE E L + G +Y+D E+ + + K + Q I+S D +
Sbjct: 1132 AGAFSDNDEEGMFELLRWGQRWGCEYIDVEICWNAQTIEKLVA--QKEESLIISSWHDVQ 1189
Query: 71 TPSEEDLGYLVSR--MQATGADIIKLVFSVNDITEIARI--FQLLSHCQVPIIAYSVGER 126
+ D + ++ + A DIIKLV I + ++ F+ +IA ++G
Sbjct: 1190 KVTPWDGKAIETKYELAAKYGDIIKLVGVAETIQDNFKLETFRASKQDGKNLIAINMGAA 1249
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVG 184
G +S++L N L + P P SL + K H+ + F LI P+
Sbjct: 1250 GQLSRVL----NECLTPVTHPALPQKAAPGQLSLAEINKTRHLIGLLPAQSFWLIGTPIQ 1305
Query: 185 HSKGPILHNPTFR------HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 238
HS P LHN F+ H ++ + +D + P F G SV P+K +V
Sbjct: 1306 HSMSPTLHNTGFQTLGLPHHYGLLECHMVEYAED-----AILKDPSFGGASVTIPHKVSV 1360
Query: 239 MKFCDEVHPLAQAIAAVNTIIRRPS------DGKLIGYNTDCEASITAIEDAIKERGYKN 292
MK+ DEV A+ I AVNT+ R + + IG NTD I+ + +
Sbjct: 1361 MKYLDEVTENAKMIGAVNTVFVRETVVNGEKKRQFIGENTDYLGMKHRIQALMMDPN--- 1417
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
P G ++ GAGG RA + + G + + + R S A D+ A +
Sbjct: 1418 -----NPPEEG---LVIGAGGTARAALYTMQKMGIQKIYL---WNRTSSKAYDLQKAFKG 1466
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-LVFDAVYTPRKTRLLKDA 411
F +I + + + + + P + + + ++ D Y PR+T+LL A
Sbjct: 1467 FIEIEVIESLENSKIGPGVIISTVPADSGIEIPAHLYGGIKGIICDMAYKPRRTKLLLQA 1526
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G V G+E+ + Q I QF ++TGK+AP + E VL ++
Sbjct: 1527 DRKGWSCVEGIEVLISQGIAQFEIWTGKKAPNHRIEEEVLRRY 1569
>gi|50555858|ref|XP_505337.1| YALI0F12639p [Yarrowia lipolytica]
gi|74632651|sp|Q6C1X5.1|ARO1_YARLI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49651207|emb|CAG78144.1| YALI0F12639p [Yarrowia lipolytica CLIB122]
Length = 1556
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 202/477 (42%), Gaps = 66/477 (13%)
Query: 7 RPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILG---------KQYSSHQ 56
R K GG + D+ L L +L + +D EL + ++ K SH
Sbjct: 1112 RTKAQGGRFPDDKPVELANLVNLGLKTAVELLDVELTYPAELVSSVGASRGYTKLLGSHH 1171
Query: 57 SGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIARIFQLL 111
+ +L+ E + +R +A D++KLV FS N E R
Sbjct: 1172 DFPGALNWSSLEWEN--------MYARAEAVPVDVVKLVGMAKSFSDNFALENFR----E 1219
Query: 112 SHCQVPIIAYSVGERGLVSQ----LLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTY 164
+H P++A ++G G +S+ LL+P + L PV P +VE + QT
Sbjct: 1220 AHTSSPLLAINMGSHGQLSRVTNTLLTPVTHADL--------PVAAAPGQLSVEEINQTR 1271
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST----Y 220
+ F ++ P+GHSK PILHN F+ + Y DD +
Sbjct: 1272 STIGMFNKNLSFFIVGTPIGHSKSPILHNTMFKKLGLPYEYSRFKTDDAAAVNAKARALL 1331
Query: 221 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 280
+ + G SV P K+ ++ F DEV PLAQ I AVNTII P +G L G NTD
Sbjct: 1332 AQGNLGGISVTIPLKQDIIPFLDEVSPLAQQIGAVNTIIPGP-NGTLKGDNTDI------ 1384
Query: 281 IEDAIKERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFER 338
G N FG+ L + ++ GAGG A G +S G A+++I + +
Sbjct: 1385 -------LGLVNALTRFGANSLDKKTALIVGAGGTSLAAVHGLRSLGFAKILIANRTLSK 1437
Query: 339 AKSLAS--DVMGAARPFEDILN-FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
A+++A D + A + N + P AT M ++++ + LV
Sbjct: 1438 AEAIADKFDNVEAVTLDSFVANKYTPSVIVSCVPATTFSMLDESNKLVSAALAASPKGLV 1497
Query: 396 FDAVYTPRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+A Y+ T LLK + G +SG+ M Q QF L+TG APKE + VL
Sbjct: 1498 LEAAYSAEATPLLKQVMDVEGWEFISGLYMLTEQGFEQFRLWTGIPAPKEVGEKAVL 1554
>gi|168213889|ref|ZP_02639514.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
gi|170714608|gb|EDT26790.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
Length = 271
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|229597718|pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis
gi|229597719|pdb|3DOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis Complexed With Shikimate
Length = 277
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|449107487|ref|ZP_21744141.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451969179|ref|ZP_21922408.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
gi|448961687|gb|EMB42382.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451702047|gb|EMD56481.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
Length = 493
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSNKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -AENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ D P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIDMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|418018195|ref|ZP_12657751.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
gi|345527044|gb|EGX30355.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
Length = 285
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 140/294 (47%), Gaps = 31/294 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYKEAV+ F DE+ P AQ I AVNT++ DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVN--CDGRLIGHNTDGFGFFASLKNF- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 342
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 343 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 394
++ D+ F+ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQRTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGASLPIPTDTKFPKGL-L 223
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P + + +
Sbjct: 224 VADIIYQPFETPFLALARKQGIGAVNGLGMLLHQAAGAFKLWTGKDMPTDAIWQ 277
>gi|422939616|ref|ZP_16966993.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890522|gb|EGQ79635.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 288
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 31/300 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T + GLI P+ HS+ P +HN F + + +Y+ V +LK +
Sbjct: 5 IQGTTGLIGLIGDPLKHSRSPHMHNSAFDKLGLDYVYLCFEVPKGELKSGIEALKTFSAK 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ FP+K+ V+K+ D++ A+ I +VNTI P K+ GYNTD
Sbjct: 65 GSNITFPHKQEVLKYLDDISEDAKIIGSVNTIKIDPETKKITGYNTDG------------ 112
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
RG+ P + VL G GGAGRA+A G + E K LA+++
Sbjct: 113 -RGFIASLDELNIPFRKQKVVLIGVGGAGRAIAIQLAYEGVGELCIK---ELNKDLANEI 168
Query: 347 MGAARPF------------EDILNFQPEKGAILANATPLGMHPNTDRVPVS-EETLRDYQ 393
E+ L + + +L NATPLGM + +S E L
Sbjct: 169 KETINKHIPNVNVKILADDEETLKEELKDACLLVNATPLGMKGRENLCVISGPEVLHKDL 228
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
V+D VY PR+T L+K A+ AG +G+ M + Q F ++ + P++++R+ + K
Sbjct: 229 FVYDIVYDPRETLLMKYAKQAGCKTTNGINMMIWQGAIAFKIWFDIDMPQDYVRQELFEK 288
>gi|15613887|ref|NP_242190.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
gi|20137510|sp|Q9KD93.1|AROE_BACHD RecName: Full=Shikimate dehydrogenase
gi|10173940|dbj|BAB05043.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
Length = 278
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K+FGL+ PVGHS P++HN F+ ++++G Y V+ L+K + GF+V
Sbjct: 3 KLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M + D V AQ I AVNT++ + DG+L G NTD + + ++ D +
Sbjct: 63 IPHKVTIMDYLDMVDEEAQEIGAVNTVVMK--DGQLFGSNTDGQGYLESLMDVVT----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
+P + ++ GAGGA RA+ K R + ++A+ + A
Sbjct: 116 -------TPFPTQDVLIIGAGGAARAIGTVLKREKVRSI----------TIANRTLAKAE 158
Query: 352 PFEDILNF---------------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
F +L Q E+ +++ N T +GM P D +P+S E L +V
Sbjct: 159 EFSGVLESSETSCSALSLKEAEQQLERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVS 218
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T+ L++A+ GA V G+ MF+ Q F L+TG +E MR VL +
Sbjct: 219 DLIYNPLETKFLREAKQKGAKTVDGLGMFVNQGALAFELWTGLRPDREKMRRCVLEQL 276
>gi|325262925|ref|ZP_08129661.1| shikimate dehydrogenase [Clostridium sp. D5]
gi|324032019|gb|EGB93298.1| shikimate dehydrogenase [Clostridium sp. D5]
Length = 276
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 22/268 (8%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
FG++ +GHS P +H R N G Y + ++ + + G +V P
Sbjct: 11 FGVLGNQLGHSLSPEIHEDLLRQQNICGTYKKYELNENEAPHILEVMKAENIRGMNVTMP 70
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE + + D + P A+ I AVNTI+ + DGK GYNTD +++ +K+G
Sbjct: 71 YKEVIYQLMDVLDPHAEKIGAVNTILMK--DGKFYGYNTDYIGAVSMF--------HKDG 120
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
+ LAGR V+ G+GGA + L +G GA + E+A + P+
Sbjct: 121 VS-----LAGREIVILGSGGAAKGLIYGFHMDGAAKITVAARNEKAIEYLEERF----PY 171
Query: 354 EDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+ G IL N TPLGM+P+ PV +R +++ D VY P T L+ A+
Sbjct: 172 IHTCSLTDIPAGDILVNTTPLGMYPHIGESPVDVSVIRQFKVASDIVYNPLITEFLRIAK 231
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
G IV+G+ M + QAIG ++ K+
Sbjct: 232 EEGLQIVTGLMMLVDQAIGSEEIWLDKK 259
>gi|422873291|ref|ZP_16919776.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
gi|380305676|gb|EIA17953.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
Length = 271
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|57867066|ref|YP_188739.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251811012|ref|ZP_04825485.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|282875976|ref|ZP_06284843.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|417913720|ref|ZP_12557383.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|418606026|ref|ZP_13169322.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|418609480|ref|ZP_13172632.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|418612796|ref|ZP_13175820.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|418625281|ref|ZP_13187934.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|418626391|ref|ZP_13189003.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|418629399|ref|ZP_13191907.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|419769474|ref|ZP_14295568.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771800|ref|ZP_14297846.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|420165585|ref|ZP_14672276.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|420170302|ref|ZP_14676863.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|420172648|ref|ZP_14679147.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|420197474|ref|ZP_14703198.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|420202365|ref|ZP_14707958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|420209101|ref|ZP_14714539.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|420211257|ref|ZP_14716631.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|420227385|ref|ZP_14732154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|421606910|ref|ZP_16048161.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
gi|71152254|sp|Q5HNV1.1|AROE_STAEQ RecName: Full=Shikimate dehydrogenase
gi|57637724|gb|AAW54512.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251805522|gb|EES58179.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|281295001|gb|EFA87528.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|341654742|gb|EGS78480.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|374407694|gb|EHQ78546.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|374409465|gb|EHQ80256.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|374817873|gb|EHR82048.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|374825423|gb|EHR89359.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|374832825|gb|EHR96530.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|374834102|gb|EHR97762.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|383358093|gb|EID35554.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360619|gb|EID38014.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|394235386|gb|EJD80958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|394240640|gb|EJD86063.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|394241809|gb|EJD87218.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|394266281|gb|EJE10927.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|394269773|gb|EJE14303.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|394279329|gb|EJE23637.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|394281710|gb|EJE25936.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|394297191|gb|EJE40800.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|406657379|gb|EKC83767.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
Length = 269
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|18309682|ref|NP_561616.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
gi|24211457|sp|Q8XMI8.1|AROE_CLOPE RecName: Full=Shikimate dehydrogenase
gi|18144359|dbj|BAB80406.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
Length = 271
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+ I AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKVIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|407462089|ref|YP_006773406.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
gi|407045711|gb|AFS80464.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
Length = 273
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K F +I P+ HS P +H+ FR +N + Y+ + ++L + GF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKEELGEGIEGLKKIKINGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +MK+ D++ I AVNT++ +DG L GYNTD + + + +K+R
Sbjct: 63 IPHKVEMMKYLDKIDESCSLIGAVNTVVN--NDGILKGYNTDMDGFL----EPLKKRNV- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSL---ASDVM 347
+A +L GAGGA RA+ G AK + + I + E+A SL A +
Sbjct: 116 --------DIANSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANSLVEFAQKIS 167
Query: 348 GAARPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+A D + + I+ NAT +G+ + P+S E + +V+D VY P T
Sbjct: 168 LSANAITVDKVGESAKNYNIIVNATSIGLK--NESSPISLEGIDKETVVYDIVYMPMHTD 225
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LK A+ AI++ G EM L QA F ++ G EAP M++ +L
Sbjct: 226 FLKKAKEKNAIVIFGYEMLLGQAARAFEIWHGMEAPYNAMKKALL 270
>gi|27468200|ref|NP_764837.1| shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
gi|32129422|sp|Q8CP09.1|AROE_STAES RecName: Full=Shikimate dehydrogenase
gi|27315746|gb|AAO04881.1|AE016748_115 shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
Length = 272
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 6 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 62
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 63 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 107
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 108 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 167
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 168 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 219
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 220 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 268
>gi|239905373|ref|YP_002952112.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
gi|239795237|dbj|BAH74226.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
Length = 274
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 231
++FG+I P+GH+ P++HN F + Y P +DL F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEDLPAFMERLRQTPIAGASVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGY 290
P+K AVM F DEV L QA AVNT+ R DG+L+G NTD E + I R
Sbjct: 62 IPHKTAVMAFVDEVTDLGQAAGAVNTLYWR--DGRLVGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
A + A +G G +R FE+A++LA + A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSG------VVGVTAR---------RFEQAQALAREFGVLA 164
Query: 351 RPFEDILNFQPEKGAI----LANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKT 405
P++ E+GA L NATP+GM + V P + L + FD VY P +T
Sbjct: 165 VPWD-------ERGAFGADFLTNATPMGMAGRFEGVSPYPAQALAPGVVAFDLVYNPYET 217
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
RL DA AAG +V G+EMFL QA+ QF L+TG+ P + +R ++L
Sbjct: 218 RLAADAAAAGGTVVPGLEMFLYQALEQFRLWTGRLLPDDELRSLLL 263
>gi|194476868|ref|YP_002049047.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
gi|171191875|gb|ACB42837.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
Length = 304
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 48/313 (15%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSV 230
T + G++ PV HS PI+HN + + N +Y+P+ +++ L+ S+ D GF++
Sbjct: 7 TALVGILGNPVSHSLSPIMHNAALKSLGLNWLYIPLPINNTSLEILVQNLSNIDCRGFNI 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRP-SDGKLIGYNTDCEASITAIEDAIKERG 289
P+KE + + E+ P+A+ + AVNT IR P ++ +G NTD E G
Sbjct: 67 TIPHKEIIAQLATELTPIAKRVGAVNTFIREPNTNNGWLGTNTDVE-------------G 113
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDI----DF-ERAKS 341
+ N + L+ + V+ G GG+ RA+ G RV+ DI F + +
Sbjct: 114 FINSLKNNHINLSQKRAVILGCGGSARAILVALVELGVASIRVIGRDIYKLTKFTDNYQY 173
Query: 342 LASDVMGAA-----------RPFEDILNFQPEKGAILANATPLGM-----HPNTDRVPVS 385
L D+ + FE L ++ N TP+GM + P++
Sbjct: 174 LHPDLSAVTWNETESKELELKLFEKTL----TNADLIVNTTPIGMTNVSISSSALLSPLT 229
Query: 386 E---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEA 441
E + L+ +++D +YTPR T LLK + G I + G+EM + Q L+TG K
Sbjct: 230 ESYLDRLKSNVVIYDLIYTPRPTVLLKKSAERGFICIDGLEMLVEQGAASLKLWTGLKSV 289
Query: 442 PKEFMREIVLAKF 454
P MR L K
Sbjct: 290 PTNIMRNSALNKL 302
>gi|295109164|emb|CBL23117.1| shikimate dehydrogenase [Ruminococcus obeum A2-162]
Length = 288
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 30/297 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+HI T + L+ PV HS P +HN + + Y+ V D + + +
Sbjct: 3 KHITGHTGLLCLLGSPVAHSVSPEMHNEACDQLGLDYTYLAFDVPEDKMPEAVQGLRTMG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G+++ P K + K D+V P ++ A NTI+ +G L Y TD
Sbjct: 63 ARGWNITMPGKNIMCKLADKVSPASEISGACNTIVN--DNGVLTAYTTD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAK 340
G+ A G + G+ L GAGGA A+ A G A + +F++ F RA+
Sbjct: 110 --GVGFMRAVAENGVDIIGKKMTLLGAGGAATAILVQAALDGVAEINVFNVRDNFFSRAE 167
Query: 341 SLA------SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
+ ++ ++D IL + AIL N T +GM PN DR +++ ++
Sbjct: 168 EIVARLNERTECKVTLHDYDDPEILRASIAESAILVNGTSVGMAPNVDRTIITDTSMFHK 227
Query: 393 QL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L VFD +Y P++TRLL++A+ AG +G+ M L Q F L+TG+E P E ++E
Sbjct: 228 DLFVFDVIYNPQETRLLREAKEAGCRTGNGMYMLLYQGAASFKLWTGEEMPVEIIKE 284
>gi|379723334|ref|YP_005315465.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
gi|378572006|gb|AFC32316.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
Length = 302
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 346 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ G + ++I + A++ N T +GM+PN D VP+ +R+ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELAGD-AALIVNNTLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 402 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|417659556|ref|ZP_12309156.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|417908509|ref|ZP_12552266.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|418605463|ref|ZP_13168787.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|420183257|ref|ZP_14689390.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|420194893|ref|ZP_14700690.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|420214055|ref|ZP_14719335.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|420216205|ref|ZP_14721421.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|420220541|ref|ZP_14725500.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|420221619|ref|ZP_14726546.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|420225792|ref|ZP_14730619.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|420229699|ref|ZP_14734404.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|420232110|ref|ZP_14736752.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|420234757|ref|ZP_14739317.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
gi|329735193|gb|EGG71485.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|341655870|gb|EGS79593.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|374402352|gb|EHQ73382.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|394249720|gb|EJD94933.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|394263953|gb|EJE08674.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|394283977|gb|EJE28138.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|394285894|gb|EJE29960.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|394290245|gb|EJE34109.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|394292295|gb|EJE36054.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|394293226|gb|EJE36949.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|394298993|gb|EJE42548.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|394301832|gb|EJE45286.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|394304000|gb|EJE47410.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
Length = 269
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 230
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 346
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|427736701|ref|YP_007056245.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
gi|427371742|gb|AFY55698.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
Length = 290
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 35/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I +TK+ G+I PV HS P++HN + + +Y+P ++ +L +++
Sbjct: 2 ITGNTKLLGVIGHPVEHSLSPLMHNAALEKLRLDYVYLPFPIEPQNLATALDGFAAIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+ P+K+A++ + P+A+A+ AVNT++R+ D K IG NTD E I ++ +
Sbjct: 62 GFNATIPHKQAIVPKLSNIEPIARAVGAVNTVVRK--DDKWIGTNTDVEGFIAPLQSLDR 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ N ++ G GGA RA+ G G A V + + ++ +
Sbjct: 120 DWSQTNA-------------LVLGNGGAARAVVAGCTQLGCASVRVVGRNLQKLEEFRDS 166
Query: 346 VMGAARPFEDI-LNFQ-------PE---KGAILANATPLGMHPNTDRVPVSEET---LRD 391
+ P + +N Q PE + +L N TP+GM+P D P++ + L
Sbjct: 167 WQDS--PLSPLKVNVQVHEWGYIPEIIKEANLLINTTPIGMYPKIDNSPINADLFLHLPK 224
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
+V+D +YTP T+ L+ A+ A + G+EM ++Q ++ +E P + MR+
Sbjct: 225 DTIVYDLIYTPSPTKFLQYAQQADKTAIDGLEMLVQQGAAALKIWLRRETVPVDVMRK 282
>gi|423106412|ref|ZP_17094113.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
gi|376377849|gb|EHS90616.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
Length = 287
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 340
+KE G + G+ + GAGGA AL A + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDDVKAISIFNRKDKFFANAE 167
Query: 341 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNIL 286
>gi|168204596|ref|ZP_02630601.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
gi|170663804|gb|EDT16487.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
Length = 271
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PN + V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKNNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|421076099|ref|ZP_15537101.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
gi|392525958|gb|EIW49082.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
Length = 281
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I + T+ G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTQKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD +
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKSIGYNTDAQ----------- 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERA----KS 341
G+ S G + + V+ GAGGA RA+A G G + +I + E+A K
Sbjct: 109 --GFVQSILSNGIKITEQTAVILGAGGAARAVACGLFQHGIKKIIIGARNLEKAQQFVKL 166
Query: 342 LASDVMGAARPFEDILNFQP--EKGAILANATPLGMH-PNTDRVPVSEETLRDYQLVFDA 398
+++V A +ED F+ ++ IL N+TP+GM +T+ + + E L V D
Sbjct: 167 FSTNVDIQAYDWED-FGFKNLLQECDILINSTPIGMSVHDTEVLRIPWEILNPEAAVCDL 225
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+Y P KT+LL A+ G I ++G+ M + Q F L+TG++ P++ M +
Sbjct: 226 IYNPSKTQLLLSAKKHGHIAINGLGMLIEQGALAFELWTGEQGPRQIMSD 275
>gi|237756605|ref|ZP_04585122.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691236|gb|EEP60327.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 279
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 29/290 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ +T V+GL PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGLFGYPVKHSKSPTFQTAVFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ G +AG+ ++ GAGG+ RA+ +G ++G ++ + + +RA++L D
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGVGKIYLANRTIKRAENLIED 167
Query: 346 -------VMGAARPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 397
V +P D +N + ++ N T +G++ + + + V D
Sbjct: 168 FSNFYRIVKMIIKPISLDEINRILNEVELIVNTTSVGLNEDDPEI-FDYNLINSSHTVVD 226
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+Y +T+LL+ A+ A +G M + Q F ++TGK AP E M+
Sbjct: 227 IIY--EETKLLQKAKEKNANYQNGYPMLIYQGAKSFEIWTGKPAPIEVMK 274
>gi|124026892|ref|YP_001016007.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL1A]
gi|123961960|gb|ABM76743.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
NATL1A]
Length = 311
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 36/303 (11%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSS 222
K+ I T + GL+ +PV HS PI+HN + + + YV P DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCHSQDLEKVTKALRF 75
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
DF G ++ P+K+ V+K C+++ +A I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEIANDIQAVNTLIPE-KNNQWIGANTDVQGFLTPLK 134
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 342
D L + V+ G GG+ RA+ G S + V E+ ++
Sbjct: 135 D---------------HNLKNKSVVVIGCGGSARAVVMGLSSLNIKKVTIISRNEKTLNI 179
Query: 343 ASDVMGAARPFEDI---------LNFQP--EKGAILANATPLGMH---PNTDRVPVSEET 388
DI LN P ++ ++ N TP+GM+ + VP+ E
Sbjct: 180 FVQSTSNLLSKRDISIESINNTKLNVLPYIQEADLIINTTPIGMNGSQAKQESVPLGHEV 239
Query: 389 ---LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAPKE 444
L + +++D +YTPR T LK + + G++M + Q L+TG + P +
Sbjct: 240 WDCLSNKTILYDLIYTPRPTNWLKIGQQKNCFTIDGLDMLVEQGAFSIKLWTGFHDVPVQ 299
Query: 445 FMR 447
M+
Sbjct: 300 TMK 302
>gi|325290050|ref|YP_004266231.1| shikimate dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
gi|324965451|gb|ADY56230.1| Shikimate dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 34/284 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
+ +I PV HS P++H F +Y I VP +L + S + G+++
Sbjct: 3 YAVIGNPVKHSLSPVMHMAGFLASGIDASYEAITVPS--GELDAYVQMLSE-QYHGWNIT 59
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
+PYKE ++K+ D+V AQA+ AVNT+ + GKL GYNTD + A+++A
Sbjct: 60 YPYKEDMIKYLDDVSEEAQALGAVNTV--KNERGKLYGYNTDGAGFVAAVQNA------- 110
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G AG + GAGGA RA+ + A + I + + ++A LA +
Sbjct: 111 ------GFVPAGNRVAVIGAGGAARAVIYALAKEEAEITIVNRNQQKAGELARQI---EN 161
Query: 352 PFEDILNFQP-EKG------AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
F +N P +KG ++ TP+GM + P+ E +++ L D +Y P +
Sbjct: 162 KFGRPVNCVPFDKGEWMLSSGLIIQGTPIGMQ--DEPFPLVLEGIKEKVLAVDLIYKPLQ 219
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
T LK A+ G I++G+EM L Q ++++ G++AP E MR+
Sbjct: 220 TNFLKQAQNLGCRIMNGLEMLLYQGAYAWDIWFGRKAPVENMRK 263
>gi|421277007|ref|ZP_15727827.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
gi|395876288|gb|EJG87364.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
Length = 284
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 49/308 (15%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+G+ SF ++ + VL GAGGA +A+ A G +++ +F + S
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISVF---------VRSS 156
Query: 346 VMGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSE 386
M RP+ ED+ Q + +L NAT +GM + +P S
Sbjct: 157 SMEKTRPYLEKIQNTTGFRVDLLALEDVQELQDSITQADLLVNATSVGMDGFSQPIPTSI 216
Query: 387 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
L + LV D +Y P +T LK A G V+G+ M L QA F L+TGKE P + +
Sbjct: 217 -VLPEKLLVADVIYQPFETPFLKWARNQGNHAVNGLGMLLYQAAEAFELWTGKEMPTDQI 275
Query: 447 REIVLAKF 454
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|386726061|ref|YP_006192387.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
gi|384093186|gb|AFH64622.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
Length = 302
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 346 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ G + ++I + A++ N T +GM+PN D VP+ +R+ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGD-AALIVNNTLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 402 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|110801505|ref|YP_698019.1| shikimate 5-dehydrogenase [Clostridium perfringens SM101]
gi|123341937|sp|Q0SV31.1|AROE_CLOPS RecName: Full=Shikimate dehydrogenase
gi|110682006|gb|ABG85376.1| shikimate dehydrogenase [Clostridium perfringens SM101]
Length = 271
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVRGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+ D
Sbjct: 113 ------KVDIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKVFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVALDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 443
A+ G V G+ M + Q + ++ G + K
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDK 257
>gi|315645929|ref|ZP_07899050.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
gi|315278690|gb|EFU42004.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
Length = 286
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 20/292 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I D + G++ P+GHSK P +HN + +G YVP+ V + L + + F
Sbjct: 7 IERDYLLLGVMGDPIGHSKSPAMHNAAITALGLSGAYVPLHVRPEGLGEAIQAVKALGFR 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VMK+ D V A+ I AVNTI+ +G L GYNTD + +++D
Sbjct: 67 GVNVTIPHKVEVMKYLDVVDEGARQIGAVNTIVN--DNGTLKGYNTDGIGYVRSLKD--- 121
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF---GAKSRGARVVIFDIDFERAKSLA 343
L G+ V+ GAGGA R + + G K +V A +
Sbjct: 122 ---------EACPDLKGKRIVVLGAGGAARGIIYALIGEKPETISIVNRTAAKALALAEE 172
Query: 344 SDVMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
+ R + ED ++ N T +GM P +P+ + + + +V D +Y P
Sbjct: 173 WSSLADLRGYGEDYAEEALLTADVIINTTSVGMFPRISEIPIPQGHIPEGIVVSDLIYNP 232
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
KT LL+ E + G+ MF+ Q +TG AP + M+E VL+ F
Sbjct: 233 LKTELLRQGELRQCTVHGGLGMFINQGAYALEYWTGLTAPVQAMKEAVLSSF 284
>gi|296127375|ref|YP_003634627.1| shikimate 5-dehydrogenase [Brachyspira murdochii DSM 12563]
gi|296019191|gb|ADG72428.1| shikimate 5-dehydrogenase [Brachyspira murdochii DSM 12563]
Length = 283
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 35/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
IN+ T + GL + P HS PI+HN F +N N Y+ VD +LK ++ + +
Sbjct: 3 INSSTILTGLFASPCRHSISPIMHNEAFNKLNLNYAYLAFEVDKNNLKDAVNSIKTLNMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-- 284
G ++ P K+ V+K+ DE+ A+ +VNTI+ +G L GY+TD E I ++E+
Sbjct: 63 GVNLSMPNKKEVIKYLDEISEAAELTQSVNTIVN--DNGILKGYSTDGEGFIKSLEEENI 120
Query: 285 -IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK 340
IK++ + G GGA A+ A G + + +F D ++ K
Sbjct: 121 FIKDKN----------------ITILGTGGASIAIISQAALYGVKGIYVFKRDTNWGEQK 164
Query: 341 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
+ ++ ++IL + + +IL NAT +GM + + + RD
Sbjct: 165 KIIDNIAEKTNCSIELFSLENKNILKRKIDDSSILINATSVGMKEDVSLIE-DKTFFRDD 223
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D +Y+P KT+LL+ +E G I++G+ M L Q F L+T ++ P E+++ I+
Sbjct: 224 LVVSDCIYSPAKTKLLQISEKEGCKIINGMGMLLYQGALSFELWTNEKMPVEYIKNII 281
>gi|288818612|ref|YP_003432960.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384129366|ref|YP_005511979.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|288788012|dbj|BAI69759.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308752203|gb|ADO45686.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
Length = 270
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+++ T+V+G++ PV HS P+ N F +++ + +YVP V D K+ F +
Sbjct: 2 NLSGKTEVYGIVGFPVKHSLSPVFQNAFFEYLSLDAVYVPFEVKPDSFKEAFLGLKALGV 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ P+KE + CD ++ I AVNT+ + +D ++ GYNTD + A+ +
Sbjct: 62 KGVNITVPFKERAFELCDLSDEPSKVIRAVNTV--KFTD-RIEGYNTDWIGFLRALRELE 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 345
KE L G+ ++ GAGG +A+ + G + IF+ +ERA LA +
Sbjct: 119 KE-------------LEGKKVLVLGAGGTAKAVVYALSREGCYIYIFNRTYERAIELARN 165
Query: 346 VMG-AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYTPR 403
+ ED+L+ I+ N T +G+ + D P+ + + LRD+ +VFD +Y R
Sbjct: 166 FSAQVVKKPEDVLD----DADIIINTTSVGL--SDDDPPLFDYQMLRDHHIVFDVIY--R 217
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
T L+K A GA +G+ M + Q + F ++TG EAP
Sbjct: 218 STPLVKTALKKGAKAQNGLSMLIYQGMESFRIWTGLEAP 256
>gi|188587948|ref|YP_001920063.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498229|gb|ACD51365.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
Length = 289
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPTMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ D++ P A+ AVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVN--DDGVLTGHITDGIGYMRALKDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAK 340
G G+ + GAGGA A+ A G A + IF D F RA+
Sbjct: 121 -------------GINPIGKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 341 SLASDV---MGAARPFEDILNFQPEKGAIL-----ANATPLGMHPNTDRVPVSEET-LRD 391
D+ D+ + K I+ NAT +GM P + + + + LR
Sbjct: 168 KTVKDINEKTNCKATLYDLSDLDKLKEEIVDSYLFTNATGMGMKPLEGKTYIPDSSFLRS 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY PR+T LL+ A G V+G+ M L Q F ++TGKE P E+M++I+
Sbjct: 228 DLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAVAFEMWTGKEMPIEYMKDIL 286
>gi|375361468|ref|YP_005129507.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451347892|ref|YP_007446523.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371567462|emb|CCF04312.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449851650|gb|AGF28642.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 303
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGVDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEIKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|210622509|ref|ZP_03293214.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
gi|210154222|gb|EEA85228.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
Length = 294
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 139/285 (48%), Gaps = 28/285 (9%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DFA 226
N++T++F L+ PV +S P +H+ F NG Y+ F + +K + T S +
Sbjct: 14 NSETRIFALLGHPVSNSFSPNMHSYLFEKYGVNGAYL-CFDIEPRKIYKTVESMRILNAV 72
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V PYK +M DE+ A+ I AVNT+ + DG L GYNTD + AI D
Sbjct: 73 GFNVTIPYKTDIMAGLDEIDRNAELIGAVNTV--KNEDGVLKGYNTDGRGFVKAIIDR-- 128
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA-- 343
+ G+ ++ G+GGA R++A S G ++ I + E A+ +A
Sbjct: 129 -----------NISIIGKSALILGSGGACRSIAIEMASNGIGKIDIRNRSLENAEKIAKR 177
Query: 344 -SDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV-FDAV 399
+ V G + E + EK L N TP+GM + P+ E D +V +D V
Sbjct: 178 VNSVFGTEVVYSKEVVTKNDLEKYDFLINTTPIGME--SKECPIDEGIEVDSDIVVYDIV 235
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
Y P +T L+K AE ++ G++M + Q I F ++TGK+ E
Sbjct: 236 YKPHRTNLIKWAEKNNLKVIHGIDMLINQGIDAFEIWTGKKVDSE 280
>gi|410725322|ref|ZP_11363756.1| shikimate 5-dehydrogenase [Clostridium sp. Maddingley MBC34-26]
gi|410601974|gb|EKQ56468.1| shikimate 5-dehydrogenase [Clostridium sp. Maddingley MBC34-26]
Length = 270
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
+GLI + + HS P +HN F+ + G Y V+ +L K + G +V P
Sbjct: 4 YGLIGEKLSHSLSPKIHNTLFKALEIEGAYKLFEVEKENLSKLMDSLKLLKIKGVNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YK+ VMK+ D + A+ I AVNTI + D KL GYNTD T + + N
Sbjct: 64 YKQDVMKYLDFISDEAKKIGAVNTIYLK--DNKLYGYNTDYFGFGTILNN--------NN 113
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
A + + ++ G GGA +A+ G + + + S +D + +
Sbjct: 114 IA-----VKDNIAMVLGNGGAAKAVINYLLDNGIKKIYLVSRKIKDNSSYNDKRIEYKTY 168
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
EDI + KG IL N TPLGM+PN D PV+E+ + +Y + D +Y P++T+ LK
Sbjct: 169 EDISDI---KGDILINTTPLGMYPNIDNTPVNEDVISNYGSLVDIIYNPKETKFLKIGRT 225
Query: 414 AGAIIVSGVEMFLRQAIGQFNLFTG 438
+ G+EM + QAI ++ G
Sbjct: 226 LNKKVCGGIEMLVGQAIKAEEIWQG 250
>gi|220931440|ref|YP_002508348.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
gi|254806746|sp|B8D2C6.1|AROE_HALOH RecName: Full=Shikimate dehydrogenase
gi|219992750|gb|ACL69353.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
Length = 289
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T+V GL+ P+GHS P +HN ++ + N +Y+P+ + D LK+ + +F G +V
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ LA I AVNTI+ + GKL GYNTD +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIVN--NGGKLKGYNTDALGFKKMLED------- 116
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLAS----- 344
SF + G V+ GAGGA RA+ A A+ + + + + ++A L
Sbjct: 117 ---DCSF--EIKGTKAVIIGAGGASRAVGAVLAREGASEIFLLNRTLKKAAKLVGIWNKT 171
Query: 345 --DVMGAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDAV 399
+ A P ++ + P ++ ++ + TP+GM P PV ++E + LV D V
Sbjct: 172 YPGIKTVALPLDED-KYLPVVKRCDVIIDTTPVGMAPGIKGGPVIAKEAITRDTLVVDLV 230
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
Y P +T L+K GA ++G M + QA F L+TG + P+ F++ +
Sbjct: 231 YNPPETTLIKAGRQVGARTMNGFPMLIYQAAYAFKLWTGIK-PELFIKPV 279
>gi|403237574|ref|ZP_10916160.1| shikimate 5-dehydrogenase [Bacillus sp. 10403023]
Length = 281
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
KV+G+I P+ HS P + N F + Y V +K G +V
Sbjct: 3 KVYGVIGNPISHSMSPAMLNDMFETYHIEARYHAFHVQTGQVKAAIEGIRGLGVYGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K V+ + DEV +A I AVNTI+ +GKLIGYNTD I ++ I +
Sbjct: 63 IPHKVEVIDYLDEVEEVAANIGAVNTIVNE--NGKLIGYNTDGNGFIRSLNRVISNEELR 120
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
+ ++ GAGGA R + + G +++ I + ERAK + D
Sbjct: 121 SANV-----------LIVGAGGAARGIFISLAAMGVSKIDIVNRTIERAKGIIDDCRFEV 169
Query: 351 RPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
L+F+ + + ++ N T +GMHPN D P+S E L +V D +Y P +T
Sbjct: 170 ESHP--LSFKEAEASLSKYQVVVNTTSVGMHPNVDDTPLSVENLAPKTIVSDIIYNPFET 227
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+ L+DA GAI +G+ MF+ Q F +TG + M +V
Sbjct: 228 KFLRDAAKYGAITQNGIGMFVYQGALAFEKWTGIFPDTDRMERLV 272
>gi|116071826|ref|ZP_01469094.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
gi|116065449|gb|EAU71207.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
Length = 289
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN DT + GL+ PV HS P +HN + + N Y+P+ +LK+
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLPLPCTSQNLKEVLEGLRGVGCH 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAI 285
G +V P+K+ V C E+ PLA+ + AVNT+I P D G G NTD E +T + +
Sbjct: 62 GLNVTIPHKQDVAGLCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGEPS 119
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 344
+ + V+ G GG+ RA+A + G A + + +
Sbjct: 120 SWQNCRG--------------VIIGCGGSARAIAAALQGLGLASITVIGRRRDALDEFIQ 165
Query: 345 DVMGAARPFEDILNFQP------EKGAILANATPLGM--HPNTDRVPVSE---ETLRDYQ 393
D+ P L+ P E+ ++ N TP+GM H P+ E LR
Sbjct: 166 DLQHDDAPLTPCLHSNPMLASLIEQADLVVNTTPVGMAQHGEAQAFPLGEAIWSHLRGSA 225
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVLA 452
+++D VYTPR T L ++ G + G+EM ++Q L++G+ + P E MR A
Sbjct: 226 VLYDLVYTPRPTAWLSWGQSRGHRCIDGLEMLVQQGAASLRLWSGRNDVPVETMRRAAEA 285
Query: 453 KF 454
Sbjct: 286 AL 287
>gi|375309511|ref|ZP_09774792.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375078820|gb|EHS57047.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 290
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 136/285 (47%), Gaps = 22/285 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 16 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 75
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + R K
Sbjct: 76 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV---------RSLKE 124
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 351
T+ L G + GAGGA R + + R V+I + E+A+ LA + A
Sbjct: 125 ETSV---ELKGAKIAVLGAGGAARGVIHALLEERPESVMILNRTREKAEQLAKEWTTEAI 181
Query: 352 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
P N + + +L N T +GM P +D +P+ + +V D +Y P +TRL
Sbjct: 182 PVTGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRL 241
Query: 408 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
L+++ E G I+ G+ MF+ Q F FTG + MR VL
Sbjct: 242 LRESREQRGCIVHGGLGMFVYQGAVAFEYFTGIAPAVDQMRAAVL 286
>gi|417936145|ref|ZP_12579462.1| shikimate dehydrogenase [Streptococcus infantis X]
gi|343403054|gb|EGV15559.1| shikimate dehydrogenase [Streptococcus infantis X]
Length = 284
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLA 343
+G+ SF ++ + VL GAGGA +A+ A G V + E+ +
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISVFVRSSSMEKTRPYL 165
Query: 344 SDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
+ A ED+ + Q + +L NAT +GM + +P S L + +V
Sbjct: 166 EKIQNATGFRVDLFALEDVQDLQDSITQADLLVNATSVGMDGTSQPIPTSI-VLPEKLMV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A G ++G+ M L QA F +TGKE P + + E++ K+
Sbjct: 225 ADVIYQPFETPFLKWARNQGNQSINGLGMLLYQAAEAFEFWTGKEMPTDQIWELLKQKY 283
>gi|436840750|ref|YP_007325128.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169656|emb|CCO23027.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 272
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 146/294 (49%), Gaps = 42/294 (14%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVG 231
K+FG+I P+GH+ P+LHN F N +Y+ P + ++ F T+ + +G SV
Sbjct: 8 KLFGIIGHPLGHTMSPLLHNWGFAQQNIRAVYMAWPTQPESIENFMHTFRTLPVSGASVT 67
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +VM + D++ A+AI AVNT+ R + ++IG NTD
Sbjct: 68 IPHKISVMDYIDKLTDRAKAIGAVNTLYWR--NDQVIGDNTD------------------ 107
Query: 292 NGTASFGSPL-----AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASD 345
TA PL + +L GAGGA RA G +S + I +I R +S A D
Sbjct: 108 --TAGVSEPLRPHCAQVKKALLIGAGGASRAAIVGLQS----LQIEEIHITNRTQSKAGD 161
Query: 346 VMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVY 400
+ A F D N + ++ N+T LGM +++ P+ + +V+D VY
Sbjct: 162 L---AEEFNVSTVDWDNRGDQHYDLIVNSTSLGMSGKLEKINPMILDNQDANTIVYDLVY 218
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +T LL++A A + G+EMFL Q + QF ++TG + + R+++L++
Sbjct: 219 NPLETVLLREAAARKCKTIHGIEMFLHQGLAQFKIWTGYDLDETAARKLLLSRL 272
>gi|182624165|ref|ZP_02951952.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
gi|177910781|gb|EDT73141.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
Length = 271
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + G GGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGTGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|260592406|ref|ZP_05857864.1| shikimate dehydrogenase [Prevotella veroralis F0319]
gi|260535642|gb|EEX18259.1| shikimate dehydrogenase [Prevotella veroralis F0319]
Length = 250
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + N N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFDNENINARYINFEIPSIEDFIEVIDSNPELRGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYK 291
KE V+ + D + P A AI AVN +IR GK L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEATAIGAVN-VIRVTHKGKKTQLKGFNSDVIGFTRSIEPLL-ERHHK 121
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
++ G GGA +A+ FG KS G K ++
Sbjct: 122 KA-------------LILGTGGASKAIDFGLKSLGLE----------TKFVSRTKRDGIL 158
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKD 410
+EDI + ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 159 CYEDITADIIREYNVIVNCTPLGMYPNVDSCPKLPYEAMDSHTLLYDLLYNPDETLFMTK 218
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
GA++ +G+EM L QA + + GKE
Sbjct: 219 GREQGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|385799748|ref|YP_005836152.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
gi|309389112|gb|ADO76992.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
Length = 303
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 30/294 (10%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAG 227
N +T ++GL+ + + HS P LHN FR +N N +Y+ + DL + + + F+G
Sbjct: 7 NNETNLYGLLGRDLSHSISPSLHNNGFRDLNINAVYLMLESKEKDLANYIDSLKTLGFSG 66
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
++V PYKEA++ + + LA+A AVNT++ R G+L GYNTD IE++
Sbjct: 67 WNVTLPYKEAIIPYLNGFSSLARASGAVNTVLNR--RGRLTGYNTDVIGFQRQIEES--- 121
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDV 346
G + + V+ GAGG RA +A + + A ++I + ++A+ LA +
Sbjct: 122 ----------GVKVKNKKAVVIGAGGGARAVIAALVQLKLAEIMIINRSVDQAEKLAG-L 170
Query: 347 MGAARPFE--DILNFQPEKGA-------ILANATPLGMHPNT--DRVPVSEETLRDYQLV 395
P + D + + + A ++ + TP+GM+ + ++ + L + QLV
Sbjct: 171 FREENPEQNFDFCSLEENEYASYLKTADLVVDTTPVGMYNCQIEKELVINPDYLNENQLV 230
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
D VY P KT++L +AE GA I +G+ + QA F L+T + PK+ +I
Sbjct: 231 IDLVYNPLKTKILAEAEKRGAQIGNGLPTLIYQAEASFKLWTQEMPPKKKWYQI 284
>gi|291551354|emb|CBL27616.1| shikimate dehydrogenase [Ruminococcus torques L2-14]
Length = 293
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 145/303 (47%), Gaps = 48/303 (15%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY---------VPMFVDDLKKFF 217
+ I T + LI PVGHS P ++N FR+ N + Y VP +D ++ F
Sbjct: 3 QRIKGTTGLLALIGSPVGHSGSPDMYNFCFRYHNLDYSYMAFDIKEDQVPAALDAMRLF- 61
Query: 218 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 277
G +V P K A + DE+ P A+ I AVNTI+ +GKLIG+ TD
Sbjct: 62 ------KMRGCNVTMPCKTAAAQNMDELSPAARIIGAVNTIVNE--NGKLIGHMTDGIGF 113
Query: 278 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID- 335
+ + D G + G+ V+ GAGGA A+ GA + IF+ D
Sbjct: 114 VENLRD-------------HGVDVKGKKLVILGAGGAATAIQVQCALDGATSISIFNPDD 160
Query: 336 --FERAKSLASDVMGAARPFEDILNF----------QPEKGAILANATPLGMHPNTDRVP 383
+RAK A+ + P ++ F + EK IL N T +GM P+ DR P
Sbjct: 161 PFLDRAKGTAAKLKNEV-PDCNVQVFCLDDPGKLKEEIEKADILVNGTLVGMKPHEDRSP 219
Query: 384 VSEETL-RDYQLVFDAVYTPRKTRLLKDAEAAG-AIIVSGVEMFLRQAIGQFNLFTGKEA 441
++++++ R +V D VY P +T+LL++A+ AG A + G M L Q + + L+TG +
Sbjct: 220 ITDKSVFRSDLIVCDVVYNPEETKLLREAKEAGCAKTIGGKGMLLWQGVAAYKLYTGLDM 279
Query: 442 PKE 444
P E
Sbjct: 280 PVE 282
>gi|134045782|ref|YP_001097268.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C5]
gi|132663407|gb|ABO35053.1| shikimate dehydrogenase [Methanococcus maripaludis C5]
Length = 280
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 27/289 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TK+ GLI PV HS PI+HN + N Y+ V ++LK + + A
Sbjct: 3 IDSKTKLLGLIGHPVDHSFSPIMHNAAIEDLGINYRYLAFDVSEENLKDVVAGAKAFQIA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + A+E+
Sbjct: 63 GFNITIPHKMNIMKYLDEIDDDAKAIGAVNTV--KIENGKAIGYNTDGIGAKKALEE--- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K G + ++ G+GG RA+++ ++ ++ I + + E+AK L+ ++
Sbjct: 118 ----KTGILIN------KNILIIGSGGGSRAVSY-ELAKENKLTIINRNIEKAKILSEEL 166
Query: 347 MGAARPFEDI----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LVFDAV 399
+ I LN + I+ N TP+GM+PN + PV L D + +V D +
Sbjct: 167 SKNLKKQNSITYGDLNVDIKDFDIIINTTPVGMYPNMNVKPVI--PLNDIKYGAVVMDLI 224
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Y P + LK+A GA ++G+ M + Q F ++ GK+ M++
Sbjct: 225 YNPLEPVFLKEAIKYGAETINGIGMLVYQGAVSFEIWAGKKPDVYVMKK 273
>gi|425737431|ref|ZP_18855704.1| shikimate 5-dehydrogenase [Staphylococcus massiliensis S46]
gi|425482779|gb|EKU49935.1| shikimate 5-dehydrogenase [Staphylococcus massiliensis S46]
Length = 265
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
F +I P+ HS P++H+ F+ +N Y + VP D+ +S GF+V
Sbjct: 3 FAVIGHPIDHSLSPVMHHANFQALNLDYGYEALNVP--PKDMHLIKEIITSKGLDGFNVT 60
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K +M + D + + AI AVNT+ + +GK IGYNTD GY
Sbjct: 61 IPHKTEIMSYLDVIDEASCAIGAVNTV--KIENGKWIGYNTDG-------------IGYV 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 350
G L R ++ GAGGA + +A K +V + + R S DV +
Sbjct: 106 KGLIELDLHLKHRKILILGAGGASKGIAHALDKITEHKVTVANRTLSRFDSWQLDVHTMS 165
Query: 351 RPFEDILN---FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
LN + ++ I+ N TPLGM N + +P+ L+ LV D VYTP +T
Sbjct: 166 ------LNEAALELDQFDIVINTTPLGMKDNQE-LPIELTNLKRGALVSDIVYTPSETPF 218
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
LK A+A G I +G++MF++Q F ++TG A E M+ V+
Sbjct: 219 LKAAKAQGNPIYNGLDMFVQQGAESFKIWTGHTADIEAMKNKVI 262
>gi|150261273|pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261274|pdb|2HK7|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261275|pdb|2HK8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261276|pdb|2HK8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261277|pdb|2HK8|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261278|pdb|2HK8|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261279|pdb|2HK8|E Chain E, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261280|pdb|2HK8|F Chain F, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261281|pdb|2HK8|G Chain G, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261282|pdb|2HK8|H Chain H, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
Length = 269
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 141/277 (50%), Gaps = 25/277 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ E++++ K ++ N T +G+ + D + + ++ +V D +Y ++T
Sbjct: 167 PLEVVNSPEEVID----KVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY--KET 219
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+LLK A+ GA ++ G+ M L Q I F ++ G E P
Sbjct: 220 KLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|150261283|pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261284|pdb|2HK9|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261285|pdb|2HK9|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261286|pdb|2HK9|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
Length = 275
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 141/277 (50%), Gaps = 25/277 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 68 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 125
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 126 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ E++++ K ++ N T +G+ + D + + ++ +V D +Y ++T
Sbjct: 173 PLEVVNSPEEVID----KVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY--KET 225
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+LLK A+ GA ++ G+ M L Q I F ++ G E P
Sbjct: 226 KLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 262
>gi|418977324|ref|ZP_13525148.1| shikimate dehydrogenase [Streptococcus mitis SK575]
gi|383350027|gb|EID27931.1| shikimate dehydrogenase [Streptococcus mitis SK575]
Length = 284
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF + G+ L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVFELQARIAESDLLVNATSVGMDGKSSPVPESI-VLSETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|365905896|ref|ZP_09443655.1| shikimate 5-dehydrogenase [Lactobacillus versmoldensis KCTC 3814]
Length = 297
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 134/298 (44%), Gaps = 31/298 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T + GL PVGHS P ++N +F+ N Y+ + D + T
Sbjct: 4 QIDGHTVMLGLFGSPVGHSGSPAMYNYSFQKAGINDSYLAFDIQEDQTAQALETMKFLHM 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G SV P K K D++ P A+ I AVNTI DG L G+NTD
Sbjct: 64 RGASVTMPCKTEAAKLVDKLSPAAKLIGAVNTITN--DDGVLTGHNTDG----------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAKS 341
+GY G G+ F L GAGGA A+A G + + IF D F+ A+
Sbjct: 111 --KGYVENLKQNGVDPKGKTFTLLGAGGASTAIAVQLALDGVKEIHIFNPKDSFFKNAEL 168
Query: 342 LASDVMGAARPF---------EDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRD 391
A + A ++ LN + +LANAT GM PN D+ + RD
Sbjct: 169 TAEKISKAVDTCKVTVGDINDQEQLNQSIAESDVLANATKAGMAPNVDQSNIKNLSVFRD 228
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY+P T+++ DA+A G+ + G M + Q + LFTG++ P + ++ +
Sbjct: 229 DLVVTDTVYSPEVTKMMADAKAHGSKTIGGKGMLVWQGAAAYKLFTGQDMPVDDVKRL 286
>gi|302674061|ref|XP_003026716.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
gi|300100400|gb|EFI91813.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
Length = 1635
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 203/456 (44%), Gaps = 66/456 (14%)
Query: 33 GADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSR--MQATGAD 90
G +Y+D E+ + S+ + Q ++ + I S + D D + ++ AT D
Sbjct: 1208 GVEYIDVEISLPSDHI-HQLVKNKGYAQLIASWH-DWTGAMRWDGADVAAKYAQAATFGD 1265
Query: 91 IIKLVFSVNDITE-IARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT 149
I+K+V N + + +A + +H + P+IA ++GE G +S++L F V S
Sbjct: 1266 IVKIVGKANALEDNLALLDFARAHDRKPLIALNMGEAGQMSRVLGTCF----VPVSHPKL 1321
Query: 150 PVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFRHV----NYNG 203
P P S Q + H+ K F L P+ HS P LHN F + Y+
Sbjct: 1322 PFKAAPGQLSFAQIQQALHLLGALPAKKFYLFGTPIAHSMSPTLHNTGFAALGLPHTYSL 1381
Query: 204 IYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPS 263
+ D++K + S+PDF G SV P+K V+ DE+ A+ I AVNTII
Sbjct: 1382 LETSTVGDEIK---AAVSAPDFGGASVTIPFKLDVIPLLDELSDAAKVIGAVNTIIPIQR 1438
Query: 264 DGKLI--GYNTDCEASITAIEDAIKER--GYKNGTASFGSPLAGRMFVLAGAGGAGRALA 319
D K I G NTDC I+ A+ R G + G+A ++ GAGG RA
Sbjct: 1439 DSKRILRGDNTDC----LGIQAAVTSRLAGARVGSA-----------LVLGAGGTARAAI 1483
Query: 320 FGAKSRGAR-VVIFDIDFERAKSLAS-------------DVMGAARPFEDILNFQPEKGA 365
+ + GA + +F+ +A+ L + D G P +++ A
Sbjct: 1484 YALHALGASPIYLFNRTRSKAEELHAAFPNAPVLVLDKLDAWGENTPAPNVIVSCVPAAA 1543
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQ----LVFDAVYTPRKTRLLKDAEAAGA---II 418
A G+H +P + L +Q +V D Y P +T LL+ A+A G
Sbjct: 1544 TTTEAGSEGLH-----LP---QGLLAHQNGPAVVVDMAYKPAETPLLQLAKAVGGEHWST 1595
Query: 419 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
V GVE+ L Q QF L+TG+ P+E + + V AK+
Sbjct: 1596 VPGVEVLLEQGFVQFELWTGRACPRESVSKTVWAKY 1631
>gi|386585864|ref|YP_006082266.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
gi|353738010|gb|AER19018.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
Length = 289
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 341
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 342 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 392
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLVLDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|422413795|ref|ZP_16490754.1| shikimate dehydrogenase, partial [Listeria innocua FSL S4-378]
gi|313617612|gb|EFR89917.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 222
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 124/239 (51%), Gaps = 39/239 (16%)
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD G
Sbjct: 1 VTMPCKSEVLKYMDELSPSARMIGAVNTIINE--DGKLTGHITDG-------------LG 45
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-SLAS 344
+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK ++AS
Sbjct: 46 FASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAKQTIAS 105
Query: 345 -------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-R 390
D+ AA+ E+I IL NAT +GMHP+ + PV + T+ R
Sbjct: 106 IKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKDTTVFR 160
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P ++++
Sbjct: 161 KDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 219
>gi|322391590|ref|ZP_08065059.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
gi|321145673|gb|EFX41065.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
Length = 284
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 47/307 (15%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVEATDLAETVANIRRYQMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+G+ SF ++G+ VL GAGGA +A+ A G + F R+ SL
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILTQAILDGVSQISV---FVRSASLEK-- 160
Query: 347 MGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEE 387
RP+ ED Q + +L NAT +GM + +P
Sbjct: 161 ---TRPYLKKLQIETGFKVDLFALEDSQKLQDSITQADLLVNATSVGMDGTSQPIPTGI- 216
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
L LV D +Y P +T LK A + G +G+ M L QA F L+TGKE P + +
Sbjct: 217 VLPKQLLVADVIYQPFETPFLKWARSQGNHAFNGLGMLLYQAAEAFELWTGKEMPTDQIW 276
Query: 448 EIVLAKF 454
E++ K+
Sbjct: 277 ELLKQKY 283
>gi|87301533|ref|ZP_01084373.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
gi|87283750|gb|EAQ75704.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
Length = 312
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 44/299 (14%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 225
I+A T + ++ P+ HS P +HN R + + +Y+ P+ +DL + D
Sbjct: 4 EISAHTSLVAVLGDPIRHSLSPAMHNAALRQLGLDWVYLALPVQANDLAVVVRALEAIDC 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P+K AV + E+ PLA+ + AVNT++RR G L G NTD E + +
Sbjct: 64 RGLNVTLPHKRAVAELAAELTPLARRVGAVNTLVRREGGGWL-GTNTDVEGFLAPL---- 118
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK----- 340
RG N LAG ++ G GG+ RA+ + ++ ER +
Sbjct: 119 --RGIANAEGVSVPDLAGGRALVLGCGGSARAVV---------AALVELGLERIQLAGRR 167
Query: 341 ------------SLASDVMGAARPFE-----DILNFQPEKGAILANATPLGMHPNTDRVP 383
S A+ + G A P D++ E ++ N TP+GM ++ P
Sbjct: 168 PDALAAFQAECGSWAAQLSGVAWPAAAGERGDLIKALAEAD-LVVNTTPVGMGASSSACP 226
Query: 384 VSE---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
+ + LR L++D +YTPR +RLL++ G ++ G+EM ++Q L+ G+
Sbjct: 227 LDAAELDALRAGSLIYDLIYTPRPSRLLQEGRQRGCGVLDGLEMLVQQGAAALRLWLGE 285
>gi|300727225|ref|ZP_07060641.1| shikimate dehydrogenase [Prevotella bryantii B14]
gi|299775463|gb|EFI72057.1| shikimate dehydrogenase [Prevotella bryantii B14]
Length = 250
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 34/272 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYS-SPDFAGFSVGFPY 234
+GLI P+GHS N F N + Y + +++ +P+ G +V PY
Sbjct: 4 YGLIGFPLGHSFSKNYFNQKFADENIDAEYANYEIPNIENLSEVLDLNPELKGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
KE V+ + D + P A+AI AVN I + D L G+N+D +IE IK
Sbjct: 64 KEKVISYLDNISPEARAIGAVNVIRITHKGKDTILKGFNSDVIGFTRSIEPLIK------ 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
P + +L G GGA +A+ +G KS G V F +ER ++
Sbjct: 118 -------PHHKKALIL-GTGGASKAINYGLKSLGLETV-FVSRYERPGTIQYQ------- 161
Query: 353 FEDILNFQPE---KGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLL 408
N PE + ++ N TP GM+PN D P + + L D L++D +Y P +T +
Sbjct: 162 -----NITPEIIKEYNVIVNCTPCGMYPNVDECPDIPYDALNDKCLLYDLLYNPDETLFM 216
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
K A GA++ +G+EM L QA + + GKE
Sbjct: 217 KKGAAKGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|385263902|ref|ZP_10041989.1| shikimate dehydrogenase [Bacillus sp. 5B6]
gi|385148398|gb|EIF12335.1| shikimate dehydrogenase [Bacillus sp. 5B6]
Length = 303
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELANSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGVDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCQTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|302386967|ref|YP_003822789.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
gi|302197595|gb|ADL05166.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
Length = 290
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 224
+ I+ T + GLI PVGHS P ++N F + + Y+ + V+++ K +
Sbjct: 3 KRISGKTGLLGLIGSPVGHSGSPAMYNYCFEKLGLDYAYLAFDIQVEEVPKAMEAIRTFH 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K +K+ DE+ P A+ I AVNTI+ DGKL+G+ TD
Sbjct: 63 MRGCNVTMPCKNEAVKYMDELSPAARIIGAVNTIVN--EDGKLVGHITD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
G+ + G +AG+ ++ G GGA A+ GAR + IF D FER
Sbjct: 110 --GHGFVDNLRDHGVEIAGKKIIVCGGGGAAAAIQVQCALEGAREISIFNRKDGFFERTL 167
Query: 341 SLAS-------DVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETL-R 390
A D + D+ + E G+ ILANAT LGM P + + + T+ R
Sbjct: 168 QTAERIRQEKPDCIVNVYDIGDMETMRAEMGSSDILANATILGMKPMDNESVIKDVTMFR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V DAVY P++T++LK+A+AAG ++G M + Q F L+TG E P E ++++
Sbjct: 228 PGLVVVDAVYNPKETKMLKEAKAAGCTCINGQGMLVWQGAEAFKLYTGLEMPVEEVKKL 286
>gi|313901109|ref|ZP_07834597.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|346314397|ref|ZP_08855918.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|373121312|ref|ZP_09535180.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
gi|422327326|ref|ZP_16408353.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|312954067|gb|EFR35747.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|345906755|gb|EGX76479.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|371663631|gb|EHO28818.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|371665330|gb|EHO30495.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
Length = 290
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I+ T++ GLI+ P+ HSK P +HN F + + Y+ V ++L+ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + ++ D + P A+ AVNT++ +G L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVN--DNGVLTGHITDGIGYMRSLKDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERA- 339
G AG+ + GAGGA A+ G + + IF D +ERA
Sbjct: 121 -------------GIEPAGKKVTITGAGGAATAIEIQMALDGVKEISIFNRRDEFWERAE 167
Query: 340 ---KSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
K++ A F+ + + E + ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTSCKATLFDLADTEAFKREIEDSYLFANATGVGMKPLEGQMVIPDASFLRK 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY P +T LL+ A+ G ++G+ M L Q F L+TGKE P ++M+EI+
Sbjct: 228 DLIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILD 287
Query: 452 AKF 454
KF
Sbjct: 288 IKF 290
>gi|212694466|ref|ZP_03302594.1| hypothetical protein BACDOR_03994 [Bacteroides dorei DSM 17855]
gi|237711195|ref|ZP_04541676.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265750787|ref|ZP_06086850.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|423228191|ref|ZP_17214597.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|423239305|ref|ZP_17220421.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
gi|423243454|ref|ZP_17224530.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|212662967|gb|EEB23541.1| putative shikimate dehydrogenase [Bacteroides dorei DSM 17855]
gi|229455039|gb|EEO60760.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263237683|gb|EEZ23133.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392636974|gb|EIY30852.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|392645207|gb|EIY38939.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|392647092|gb|EIY40798.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
Length = 246
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 232
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
K ++ G GGA +A+A+G K G +++L +++
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYN 161
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|417090798|ref|ZP_11956121.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
gi|353533416|gb|EHC03071.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
Length = 289
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKS- 341
K RG++ + + + G GGA A+ A GA+ + IF ER ++
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 342 -----LASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 392
A+ V ED +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVSMRVLALEDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|384264354|ref|YP_005420061.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380497707|emb|CCG48745.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 303
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCSTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|311067270|ref|YP_003972193.1| shikimate dehydrogenase [Bacillus atrophaeus 1942]
gi|419823494|ref|ZP_14347040.1| putative shikimate dehydrogenase [Bacillus atrophaeus C89]
gi|310867787|gb|ADP31262.1| putative shikimate dehydrogenase [Bacillus atrophaeus 1942]
gi|388472397|gb|EIM09174.1| putative shikimate dehydrogenase [Bacillus atrophaeus C89]
Length = 294
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 35/305 (11%)
Query: 163 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTY 220
T + IN T++ GL++ P+GHS P +HN F+ + N Y+ V + L+ +
Sbjct: 2 TKDLGRINGKTQLIGLLATPIGHSLSPTMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGM 61
Query: 221 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 280
+ GF+V P K ++ + D++ A+ AVNT++ +G L G++TD
Sbjct: 62 RALGVRGFNVSMPNKMKIIPYLDQLADSAKFSGAVNTVVN--DNGTLTGHSTDG------ 113
Query: 281 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDF 336
GY G +AG+ L G+GGA +A + G A + IF D F
Sbjct: 114 -------MGYVRNLKEHGVDIAGKKMTLIGSGGAATPIAIQSALEGLAEISIFARNDAFF 166
Query: 337 ERAKSLA---------SDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVS 385
E+A S+ P ED + E + ILAN T +GM P + + V
Sbjct: 167 EKAVENVRIINEDMKDSNCKANVYPLEDQETLRAEIASSDILANGTGVGMKP-FEGLSVI 225
Query: 386 EET--LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 443
E+ LR +V D VY P K++LL+ AE AG ++G+ M + Q F L+TGKE P
Sbjct: 226 EDVSMLRPDLIVSDVVYNPVKSKLLEQAEEAGCKTINGLGMMVWQGAMAFELWTGKEMPV 285
Query: 444 EFMRE 448
++ E
Sbjct: 286 AYINE 290
>gi|222529868|ref|YP_002573750.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
gi|254806728|sp|B9MKW9.1|AROE_ANATD RecName: Full=Shikimate dehydrogenase
gi|222456715|gb|ACM60977.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
Length = 288
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 128/271 (47%), Gaps = 43/271 (15%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTY-SSPDFAGFSVGFP 233
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEMLKEFVEMVRKDEDVVGFNITIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +++FCDEV + I A NT+ + DGKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKLLAYNTDW-------------IGFKRS 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 352
G + + ++ G+GGA +A +G GA+ V + + +E+A+ L
Sbjct: 111 LEDRGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAEKLKE-------V 163
Query: 353 FEDILNFQPE--------KGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAV 399
F+DIL P K I+ N T +GM PN + P E +Y V+D +
Sbjct: 164 FQDILKILPVEWLRRYEFKYDIIINTTSVGMFPNIESSPFDFE---NYVAGVPVFVYDMI 220
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 430
Y P KT LK+AE G I +G++M + QAI
Sbjct: 221 YNPLKTAFLKEAEKKGIKIENGLKMLVYQAI 251
>gi|387897283|ref|YP_006327579.1| shikimate dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387171393|gb|AFJ60854.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 294
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCSTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|340751883|ref|ZP_08688693.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
gi|229420848|gb|EEO35895.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
Length = 273
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 235
+GL+ K +GHS P +HN F + Y ++D K GF++ PYK
Sbjct: 4 YGLVGKKLGHSLSPEIHNYIFDKLGVEAEYSLYEIEDGKDILKLMEEKGIKGFNITIPYK 63
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
E VM D + A+ I AVN + + +G+ GYN+D + +E
Sbjct: 64 EIVMSQLDFISEEAEKIGAVNLV--KIKNGESYGYNSDYYGVVEMLE------------- 108
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVMGAARP 352
+ G++ + G+GGA +++ GA+ VV D++ +R +
Sbjct: 109 KHDVKVKGKICYVLGSGGASKSVIVALHDLGAKEIVVVTRDVESKRRELKNRFRNIEVVS 168
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+E+I+ G I+ N TPLGM+PN D P+ EE L+ + + D VY P+ T+ L+ A+
Sbjct: 169 YENIIG-----GDIVVNTTPLGMYPNIDSSPLDEEILKRFDIAVDIVYNPKTTKFLQLAK 223
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
V GV M + QAI L+ G + ++ E+
Sbjct: 224 NCSLKCVDGVSMLVGQAIKSDELWEGIDIDRDTREEV 260
>gi|448282140|ref|ZP_21473429.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|445576774|gb|ELY31222.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 278
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 142/293 (48%), Gaps = 28/293 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS P +H + + Y+ YV DL+ + + G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 61
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIED 283
P+K+ V+ D V P LA I AVNTI P S G+ G+NTD ++ A+
Sbjct: 62 IPFKQDVLDL-DLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRAL-- 118
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 343
+E +AG V+ GAGGAGRA++F GA V I + A LA
Sbjct: 119 --REHDVT---------IAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 167
Query: 344 SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+DV A D +L + +L NAT +GM D PV + L V DAVY
Sbjct: 168 ADVPDATGHGLDGTVLESLLAEADVLVNATSVGME--EDATPVPADALHGELTVMDAVYQ 225
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL+DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 226 PLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNEALRARL 278
>gi|219853166|ref|YP_002467598.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
gi|219547425|gb|ACL17875.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
Length = 457
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 23/274 (8%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
G+ P HS P ++ F + Y + + + + + + G SV P+KE
Sbjct: 206 GIAGFPASHSISPQMYAALFARFGLDYRYTRIEWPSIAEIIAVFRAGRLRGLSVTIPFKE 265
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
V+ D + P A AI AVNT++R +L G+NTD ++ ER
Sbjct: 266 QVIPLLDTIDPDATAIGAVNTVVR--CGDELAGFNTDWLGVRKPLQQHRGERA------- 316
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 356
VL GAGGA A A+ KS G + I + ER + LA+ + P
Sbjct: 317 ----------VLIGAGGAAAAAAYALKSLGMDLTILNRTEERGRVLAARFDCSTAPLSRF 366
Query: 357 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 416
+ PE ++ +ATP+GMHP+T + ++ L + VFD VYTPR T LL++AEAAGA
Sbjct: 367 GDLDPE---VVVHATPVGMHPDTGTL-LTRADLDEGMTVFDLVYTPRMTPLLREAEAAGA 422
Query: 417 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
++ G EMF+ QA QF FTG + + +R ++
Sbjct: 423 WVIPGTEMFIHQACAQFEHFTGIQVSPDLVRGVI 456
>gi|167750656|ref|ZP_02422783.1| hypothetical protein EUBSIR_01633 [Eubacterium siraeum DSM 15702]
gi|167656335|gb|EDS00465.1| putative shikimate dehydrogenase [Eubacterium siraeum DSM 15702]
Length = 281
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 139/293 (47%), Gaps = 32/293 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSPD 224
+ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 1 MTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS-- 56
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 57 LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDC---------- 104
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKSL 342
G+ + G L ++ +L G GG GR +A A G + I D D AK+L
Sbjct: 105 ---TGFTKAVGAMGMTLTNKVLLL-GCGGVGRMMAIEAVREGGELTIAVRDADIPVAKAL 160
Query: 343 ASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VFD 397
++ +A+ +L+ ++ NATP+GM+PNTD P++EE L L FD
Sbjct: 161 CEEIKQNYNSAKVEFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEEALGRITLNGFFD 220
Query: 398 AVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+Y PR+T+L+K A G VS G++M + QA +++G E E ++ I
Sbjct: 221 AIYNPRETKLMKMASDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQAI 273
>gi|294497741|ref|YP_003561441.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294347678|gb|ADE68007.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 298
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 33/301 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 332
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKEHGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 333 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 387
I E K ++ + D+L + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDMLREEIRTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LR +V D VY P +++LL+ AE+ G ++G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 448 E 448
E
Sbjct: 289 E 289
>gi|345515156|ref|ZP_08794662.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
gi|229434416|gb|EEO44493.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
Length = 246
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 232
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
K ++ G GGA +A+A+G K G +++L +++
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYD 161
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|291531999|emb|CBK97584.1| Shikimate 5-dehydrogenase [Eubacterium siraeum 70/3]
Length = 300
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 140/294 (47%), Gaps = 32/294 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSP 223
++ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 19 NMTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS- 75
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 76 -LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDCT-------- 124
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKS 341
G+ + G L ++ +L G GG GR +A A G + I D D AK+
Sbjct: 125 -----GFTKAIGAMGMTLTNKVLLL-GCGGVGRMMAIEAVREGGELTIAVRDADIPVAKA 178
Query: 342 LASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VF 396
L ++ +A+ +L+ ++ NATP+GM+PNTD P++EETL L F
Sbjct: 179 LCEEIKQNYNSAKVGFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEETLGRITLNGFF 238
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
DA+Y PR+T+L+K G VS G++M + QA +++G E E ++ I
Sbjct: 239 DAIYNPRETKLMKMVSDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQAI 292
>gi|317486523|ref|ZP_07945346.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
gi|316922198|gb|EFV43461.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
Length = 274
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 24/284 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGF 232
+ G+I P+GHS P++HN FR +N G+Y+ P+ L F + G S+
Sbjct: 9 LHGIIGYPLGHSMSPLMHNTAFRTLNLPGVYLSWPIEPGRLPAFVDAARLLNIRGCSITI 68
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG-KLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++ D+ + + A NT+ R DG K+ G NTD + +++R
Sbjct: 69 PHKIDIIPLLDKTSENVREMGACNTLYR---DGEKICGENTD----VIGFTAPLRKRSLS 121
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 350
T R+ VL GAGG RA G + G A + + + ERA++L ++
Sbjct: 122 PET---------RVLVL-GAGGVSRAAIAGLRRLGLANITLTNRRKERAEALCNEFGLLC 171
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
P+E+ + + ++ N TPLGM + +D + +D +YTP +TR L+D
Sbjct: 172 APWEERGDVPAD---LIINTTPLGMTGAQEHETPYPRAFQDNGIAYDLIYTPFQTRFLRD 228
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A AAG VSG++MF+ Q QF+L+TG P+E + + A +
Sbjct: 229 AAAAGWETVSGLDMFIGQGDAQFHLWTGHHLPEEAITAVTSALY 272
>gi|110799915|ref|YP_695145.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
gi|123148920|sp|Q0TT95.1|AROE_CLOP1 RecName: Full=Shikimate dehydrogenase
gi|110674562|gb|ABG83549.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
Length = 271
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ E L N TP GM+PN + V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|154685261|ref|YP_001420422.1| shikimate dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154351112|gb|ABS73191.1| putative Shikimate dehydrogenase [Bacillus amyloliquefaciens FZB42]
Length = 303
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|289582440|ref|YP_003480906.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|289531993|gb|ADD06344.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 280
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 142/293 (48%), Gaps = 28/293 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS P +H + + Y+ YV DL+ + + G +V
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 63
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIED 283
P+K+ V+ D V P LA I AVNTI P S G+ G+NTD ++ A+
Sbjct: 64 IPFKQDVLDL-DLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRAL-- 120
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 343
+E +AG V+ GAGGAGRA++F GA V I + A LA
Sbjct: 121 --REHDVT---------IAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 169
Query: 344 SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+DV A D +L + +L NAT +GM D PV + L V DAVY
Sbjct: 170 ADVPDATGHGLDGTVLESLLAEADVLVNATSVGME--EDATPVPADALHGELTVMDAVYQ 227
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL+DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 228 PLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNEALRARL 280
>gi|335040463|ref|ZP_08533591.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
gi|334179652|gb|EGL82289.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
Length = 302
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 15/291 (5%)
Query: 171 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGF 228
+ ++FGL + PVGHS P++HN F+ + Y P + + L + + + G
Sbjct: 4 SQKQLFGLFAHPVGHSLSPVMHNRAFQALGLPFYYHPFDIPPERLPEAVAGLKALGIRGI 63
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI--EDAIK 286
+V P+KE ++ DE+ P A+AI AVNT++ + G+L+GYNTD + ++ E I
Sbjct: 64 NVTIPHKENIVPLLDELDPEAEAIGAVNTVVLSET-GRLVGYNTDGAGYVQSLLSETGIN 122
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ G L G A +A + + + +R + + D
Sbjct: 123 LKETNVLLLGAGGAAKAIAVYLIKHGCASLTIANRTEHKAETLAH---HVQRYAAQSHDG 179
Query: 347 MGAARPFE-DILNF-QPEKGAILA-----NATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
G++ P ++ ++ Q ++ + A N TP+GM PN +VP+ + L +V D V
Sbjct: 180 KGSSSPVRINVHSWSQLDRDGVKAYQLIINTTPVGMWPNVGQVPLELKELSPGTIVSDIV 239
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
Y P +T LK AE GA + G+ MF+ Q F LFTG EAP E MR++V
Sbjct: 240 YNPLQTAFLKAAEQRGAQVHQGLGMFIFQGALAFKLFTGYEAPLEVMRKVV 290
>gi|421732532|ref|ZP_16171653.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073661|gb|EKE46653.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 294
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|310643105|ref|YP_003947863.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|309248055|gb|ADO57622.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|392303905|emb|CCI70268.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 289
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 28/294 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I D + G++ P+ HSK P++H + +G +VP+ V D L+ + F
Sbjct: 9 IERDLVLLGVLGDPIKHSKSPLMHKIALQAAGVDGDFVPLHVTPDQLEDAVKGIRALHFR 68
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K +MK+ DE+ A+ I AVNTI+ +G+L GYNTD +
Sbjct: 69 GVNVTIPHKVEIMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV-------- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASD 345
R K T+ L G + GAGGA R + + + V+I + ++A+ LA +
Sbjct: 119 -RSLKEETSV---ELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALE 174
Query: 346 VMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A P ++ + E+ +L N T +GM P +D +PV + + +V D
Sbjct: 175 WTTEAIP---VMGYSNEEARNVLTTVDVLINTTSVGMSPLSDELPVETSLIPEGIIVSDL 231
Query: 399 VYTPRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+Y P +TRLL+++ E G + G+ MF+ Q F FTG + MR VL
Sbjct: 232 IYNPLETRLLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVAPAVDQMRAAVL 285
>gi|407464424|ref|YP_006775306.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
gi|407047612|gb|AFS82364.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
Length = 273
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+K F +I P+ HS P +H+ FR +N + Y+ + +L + GF+V
Sbjct: 2 SKSFAVIGDPIDHSLSPNIHSAAFREMNLDSSYIAYRIPKGELAEGIEGLKKIKIDGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +MK+ D++ I AVNT+ + DG L GYNTD + + + K++
Sbjct: 62 TIPHKIEMMKYLDKIDESCSLIGAVNTVSNK--DGVLKGYNTDMDGFL----EPFKKKEL 115
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS----- 344
K ++ +L GAGGA RA+ G AK + + I + E+AK L+
Sbjct: 116 K---------ISDTKVLLLGAGGAARAIVAGFAKEKAKSITIANRTLEKAKDLSKFAKSI 166
Query: 345 DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+ A ED+ + I+ NAT +G+ + P+S + + + +V+D VY P
Sbjct: 167 GLDANAIKIEDVKESAKDYD-IIVNATSIGLR--NEPSPISLDGINEKTIVYDIVYMPMN 223
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T +K+A+ +II+ G EM L QA+ F ++ G EAP M++ +L F
Sbjct: 224 TDFIKNAKEKKSIIIYGYEMLLGQAVRSFEIWHGIEAPYNAMKKALLGGF 273
>gi|394992367|ref|ZP_10385148.1| putative shikimate dehydrogenase [Bacillus sp. 916]
gi|429504288|ref|YP_007185472.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452854760|ref|YP_007496443.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|393806811|gb|EJD68149.1| putative shikimate dehydrogenase [Bacillus sp. 916]
gi|429485878|gb|AFZ89802.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452079020|emb|CCP20773.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 294
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 342 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|347548873|ref|YP_004855201.1| putative shikimate 5-dehydrogenase AroD [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981944|emb|CBW85929.1| Putative shikimate 5-dehydrogenase (AroD) [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 273
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 178 LISKPVGHSKGPILHNPTFRHV----NYNGIYVP--MFVDDLKKFFSTYSSPDFAGFSVG 231
+I P+ HS P + N F+ + YN + + F ++KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYNSVLIEEDAFETEIKKLMVS----GIRGFNIT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ F DE+ PLA AVNT++R+ +GK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEPLAADSGAVNTVLRK--EGKWYGFNTDG-------------KGYL 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 345
G S ++ GAGGA +A+ K+ A++ I + E+A + +
Sbjct: 107 EGLEEIRSITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHDNHY 166
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
M +++ NF I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEEAEKNLANF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A+ GAII +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAIIQNGLSMFVNQGALAFEIWTGVKPKRSLMKEAVLEQL 270
>gi|428203364|ref|YP_007081953.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
gi|427980796|gb|AFY78396.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
Length = 288
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 27/291 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+ N +YVP V DL+K + + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAAIAHLRVNYVYVPFPVKGKDLEKAIAGFEAIGVV 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ EV AQ + AVNT+ R ++ G NTD E + +++
Sbjct: 64 GFNITIPHKQAIIPLLSEVSAAAQLVGAVNTVWR--TEAGWCGTNTDVEGFLAPLKEL-- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
+R + T ++ G GGA RA+ G G ++ + D + +
Sbjct: 120 DRDWTQVTP-----------IILGNGGAARAVVVGCAEIGCPKIRVVGRDRTKLEKFKQS 168
Query: 346 VMGAARPFEDILNFQPE------KGAILANATPLGMHPNTDRVPVSE---ETLRDYQLVF 396
+A E ++ E +L N TP+GM+P + PV E + + +
Sbjct: 169 WQNSALKTEIEVHEWSELAELVSDTKLLVNTTPVGMYPKVNESPVDAVVMEKMPTDAIAY 228
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
D +YTP T+ L A+ GA + G++M + Q ++ + P + MR
Sbjct: 229 DLIYTPNPTQFLVRAKERGAKAIDGLKMLVEQGASALKIWLQQPVPVDVMR 279
>gi|160934875|ref|ZP_02082261.1| hypothetical protein CLOLEP_03750 [Clostridium leptum DSM 753]
gi|156866328|gb|EDO59700.1| shikimate dehydrogenase [Clostridium leptum DSM 753]
Length = 281
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 141/282 (50%), Gaps = 42/282 (14%)
Query: 174 KVFGLISKPVGHSKGPILHNPTF--RHVNYN-GIY-VPMFVDDLKKFFSTYSSPDFAGFS 229
K + +I P+GH+ P +H F R ++ + G+Y +P +DL S D GF+
Sbjct: 4 KRYAVIGHPIGHTMSPFIHKRLFEMRDIDADYGVYDIP--TEDLIGKIQELKSLD--GFN 59
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
+ P+K+A++ F ++ A +VNT+ ++G L GY TD + ++A+ A
Sbjct: 60 ITIPHKQAIIPFLKQMDQKASLYQSVNTV---KNNGCLEGYTTDPDGFLSALGQA----- 111
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL--ASDVM 347
G PL GR+ +L G GG R +A+ A G V++ R KSL A+ +
Sbjct: 112 --------GIPLKGRVVIL-GTGGVARTIAYEATMAGCFVMLA----VRRKSLSHAASLS 158
Query: 348 GAARPFEDILNFQPEKGAI---------LANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
GA R D+ N E + L NATP+GM+P D +PV E L + + VFDA
Sbjct: 159 GALR--NDVHNGDTETCRLDCLSGHIDLLINATPVGMYPQIDEMPVGREILENTEYVFDA 216
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
VY P +T+LLK A G ++ G+ M + QA ++ G +
Sbjct: 217 VYNPMETKLLKTARECGCKVLGGLSMLVWQAAASHKIWDGSQ 258
>gi|443318685|ref|ZP_21047931.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
gi|442781693|gb|ELR91787.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
Length = 308
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 16/293 (5%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I T+V G+I P+ HS P + N R + ++GIYVP V + + +
Sbjct: 10 ITGKTQVLGIIGDPIAHSLSPPMQNAALRALGWDGIYVPFPVRAAAVDTALAGLWALGVV 69
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+AVM EV PLAQA+ AVNT+ R+ + G NTD + ++D
Sbjct: 70 GFNVTIPHKQAVMAALAEVTPLAQAVGAVNTVWRQ--EQGWAGTNTDVLGFVAPLQDWGH 127
Query: 287 ERGYKNGTASFGSPLAG-RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 345
E + + P + R +L G A A+A ++ + + D + +S A
Sbjct: 128 EALVPESSLAGHLPWSQRRAVILGNGGAARAAVAGCSQLHCGEIWVVGRDRNKLQSFAES 187
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 395
+ ++ + PE +L N TPLGMHP D+ PVS + L +
Sbjct: 188 WQDSPLCPTLQVASWDQLPALLPET-TLLVNTTPLGMHPREDQSPVSPQDLAQLPSDAIA 246
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+D +YTP T+ L+ A G + GVEM ++Q ++ + P MR
Sbjct: 247 YDLIYTPSPTQFLRWATERGLHTIDGVEMLVQQGAAALEIWIHQPPPIAVMRH 299
>gi|268609155|ref|ZP_06142882.1| shikimate 5-dehydrogenase [Ruminococcus flavefaciens FD-1]
Length = 277
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 25/283 (8%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 235
F L P+GHS P++H F + Y + ++ K S G +V P+K
Sbjct: 4 FALTGHPLGHSMSPLIHEKLFALSGRDAEYELIDIEPEKLAQSRELFLSLGGMNVTIPHK 63
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
+AV+ DE+ A +VN I + +G+LIGYNTDC+ + + E
Sbjct: 64 QAVIPLMDELAESALRYNSVNCI--KNDNGRLIGYNTDCDGFLRSAE------------- 108
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI--DFERAKSLASDVM----GA 349
G P+ G+ +L G GG GR +A G + + I DF+ A+ L ++++ GA
Sbjct: 109 --GLPIGGKAAIL-GCGGVGRMIAIEVARHGGDITLAVIPQDFKNAQILMAEILEKCSGA 165
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
+ +I + K IL NATP+GM P D VS++ + D VFD +Y P +T L+K
Sbjct: 166 SVRIVNISELEG-KFDILINATPVGMFPKVDACAVSDKVIEDCGSVFDVIYNPIETLLMK 224
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
A A G V G M + QA+ ++ G E + I+ A
Sbjct: 225 KARAMGKTAVGGAAMLVYQAVKAHEIWYGGTFTNEDIAPIIKA 267
>gi|451342998|ref|ZP_21912077.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449338366|gb|EMD17515.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 283
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 27/294 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 228
I T++ G+I+ P+ HS P++HN F ++N + +Y+ + LK+ + G+
Sbjct: 3 ITGYTQLIGIIADPIRHSLSPMMHNACFEYLNLDYVYLAFETEALKETIEGLKAIKARGW 62
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
+V PYK+ ++ + DE+ ++Q +VNT+I G L G +TD
Sbjct: 63 NVSMPYKKRIIPYLDEISLVSQLSDSVNTVIN--DQGYLKGTSTD-------------GL 107
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDF-------ERAK 340
G+K G + + VL GAGGA A +A GA + +F ER +
Sbjct: 108 GWKYGLKEKNISIQDKTLVLLGAGGAATAIMAQGAIDGLKEIYVFKRKNQTWSQIQERIE 167
Query: 341 SLAS----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
+ S ++ +++L + IL NAT +GM P+ + E L VF
Sbjct: 168 HMMSHTNTQIILCDIEDKELLKEKISDADILTNATDIGMSPHDKECLIDREWLHKDLTVF 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
D +Y P +T LL+ A+ G + +SG+ M L Q F L+T ++ P + R+ +
Sbjct: 228 DCIYHPLETLLLQYAKEKGCMCISGLSMLLYQGAVSFELWTNRKMPIDIARKAI 281
>gi|434394200|ref|YP_007129147.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
gi|428266041|gb|AFZ31987.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
Length = 287
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 29/292 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G++ PV HS P +HN H+ + +Y+P+ V + L F+ ++ +
Sbjct: 2 ITGKTKLLGVMGYPVEHSMSPAMHNAAIAHLKLDYVYLPLSVKPEALTTAFAGLAAINCT 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K+A++ E+ P+AQA+ AVNT+ R+ +G NTD + ++D
Sbjct: 62 GFNVTIPHKQAILPLLSEISPVAQAVGAVNTVWRQ--GDAWVGTNTDIVGFLAPLQDM-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
+ S +A ++ G GGA RA+ G + + + ++ + ++
Sbjct: 118 -------NCDWNSAVA----LILGYGGAARAVVAACAQLGCPTIHVIGRNLQKLQQFSAS 166
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDYQLV 395
A ++ + P+ +L N TP+GMHP+ + P+S L +
Sbjct: 167 WHDADITDKLQVHVWDKLPQLIPQ-ATLLVNTTPVGMHPHAEASPLSVAEMMLLPPNAIA 225
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+D +YTP T+ L+ AE GAI + G EM ++Q ++ + P E MR
Sbjct: 226 YDLIYTPSPTQFLQQAEKQGAIAIDGREMLVQQGAAALKIWLQQPVPVEVMR 277
>gi|15606233|ref|NP_213611.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
gi|9087118|sp|O67049.1|AROE_AQUAE RecName: Full=Shikimate dehydrogenase
gi|2983425|gb|AAC07007.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
Length = 269
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 25/277 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 347 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
+ E++++ K ++ N T +G+ + D + + ++ +V D +Y ++T
Sbjct: 167 PLEVVNSPEEVID----KVQVIVNTTSVGLK-DKDPEIFNYDLIKKDHVVVDIIY--KET 219
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+LLK A+ GA + G+ M L Q I F ++ G E P
Sbjct: 220 KLLKKAKEKGAKLFDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|335031420|ref|ZP_08524859.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
gi|333769670|gb|EGL46768.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
Length = 261
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ PYK+AV+ F DEV P AQ I A+NT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGALNTVVNQ--NGKLIGYNTDG------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD--IDFERAKSLA 343
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VITGKKLVMLGAGGAATAIIVQAVLDGAEEIFVFTRHSSFERVSQKM 165
Query: 344 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
++ AA+ P E ++L + A+L N T LGM +P S + LV
Sbjct: 166 KEIQQKTAAKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIPSSIRLPHSF-LV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
D +Y P +T LK A+ +V+G+ M L QA
Sbjct: 225 ADVIYQPFETPFLKWAKGQDVEVVNGLGMLLYQA 258
>gi|384048441|ref|YP_005496458.1| shikimate dehydrogenase [Bacillus megaterium WSH-002]
gi|345446132|gb|AEN91149.1| Putative Shikimate dehydrogenase [Bacillus megaterium WSH-002]
Length = 298
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 33/301 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 332
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKENGVDITGKKMTLVGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 333 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 387
I E K ++ + D L + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDRLREEIRTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LR +V D VY P K++LL+ AE+ G V+G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMKSKLLEQAESIGCHTVNGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 448 E 448
E
Sbjct: 289 E 289
>gi|306824984|ref|ZP_07458327.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432811|gb|EFM35784.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 284
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSL----- 342
SF ++ + + GAGGA +++ A G +++ +F + E+ +
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLTKLQ 169
Query: 343 -ASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
+D EDI Q + K +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTDFKVGLYALEDISELQEKIAKSDLLVNATSVGMDGQSSPVPESI-NLPETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|346309564|ref|ZP_08851648.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
gi|345898693|gb|EGX68558.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
Length = 291
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 32/295 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I+ T + LI PVGHS P +HN +F + + Y+ + D + +F
Sbjct: 3 KRISGTTTLLALIGSPVGHSSSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K V + DE+ P AQ + A NT++ +GKLIG+NTD
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDG---------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD---IDFERAK 340
G+ A G + + L G GGAG A+ GA + +F+ +FE+ +
Sbjct: 111 ---VGFVKNLAEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIRVFNRKGANFEKLE 167
Query: 341 SLASDVMGAARPFEDILNFQPEKGA---------ILANATPLGMHPNTDRVPVSEETL-R 390
+A ++ A + + +K A IL NAT +GM PN + + ++ R
Sbjct: 168 KIAKKILEFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKGTMIQDTSVYR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+ +V + +Y P++TR++++A+ AG ++ G M L Q F+LFTG+E P E
Sbjct: 228 EDLVVAEIIYNPKETRMMREAKEAGVKCVIGGKGMLLWQGAEAFHLFTGQEMPVE 282
>gi|300811894|ref|ZP_07092355.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497091|gb|EFK32152.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 310
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 37/301 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV-----PMFVDDLKKFFSTYSSP 223
++ T + GL + P+ HS P +HN + NG Y+ P + D K T
Sbjct: 25 LDGHTILLGLFADPIRHSVSPTMHNNAMAKLGLNGAYLCFEIGPDRIGDAVKALRTL--- 81
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+A++ + D++ P A+ AVNT++ G L GY TD + ++++
Sbjct: 82 DMRGVNVSMPNKQAIIPYLDKLDPAAEICGAVNTVVN--DHGFLTGYTTDGTGWLRSLQE 139
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFERA 339
G + G++ LAGAGGA +A GA+ + I D ++E A
Sbjct: 140 D-------------GQDVKGQVVTLAGAGGAAIPIAVATAMGGAKEIRIFNIHDRNWEPA 186
Query: 340 K---SLASDVMGAA---RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LR 390
K + ++ G A P ED F+ + I +AT +GM P D V + L
Sbjct: 187 KDKVAAINEATGCACSLNPMEDKEAFKQSIAESGIYCDATGVGMPPLDDLSLVEAPSWLH 246
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+ +V D VY PR+T+L++ A+ AG I +G+ M + Q F L+TGKE P ++++EI
Sbjct: 247 EDMVVSDTVYEPRETKLMRIAKEAGVKHIYNGLGMVVGQGAESFKLWTGKEMPTDYIQEI 306
Query: 450 V 450
V
Sbjct: 307 V 307
>gi|408382533|ref|ZP_11180077.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814888|gb|EKF85511.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
Length = 283
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 29/295 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I T + G++ PV HS P +HN F + + +YVP V +L +
Sbjct: 2 ITGKTGLVGIMGDPVEHSLSPPMHNAAFHQLKLDYVYVPFHVKRGNLASAIEGARTMGIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+K V+ + DE+ A+ I AVNT+ + ++ K +GYNTD ++ AIE+
Sbjct: 62 GLNLTIPHKIEVINYLDELDEAAELIGAVNTV--KFTENKAVGYNTDGFGAVKAIEETTS 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ K G F L SR V+I + E+A +L D+
Sbjct: 120 VQDKKIIIIGAGGAARAISFQLL-------------LSRVGEVLIANRTREKACNLRDDL 166
Query: 347 MG------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-DAV 399
+D L + E +L N TP+GMHP+ D PV + LV D V
Sbjct: 167 KERFNTSLGCLGLDDELGIELEDTDVLINTTPVGMHPHQDDKPVVTSDMMHSDLVVNDIV 226
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE-----FMREI 449
Y P +T LL++A GA V G +M + Q IG F ++TG P E MRE+
Sbjct: 227 YNPLETGLLREAGKVGATTVHGTKMLIYQGIGAFRIWTGINPPVEVFETALMREL 281
>gi|422412979|ref|ZP_16489938.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
gi|313618856|gb|EFR90731.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
Length = 273
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 231
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEVEIKKLMDS----GVRGFNIT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 345
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHH 166
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|452852866|ref|YP_007494550.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
gi|451896520|emb|CCH49399.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
Length = 272
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 22/283 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGF 232
++G+I P+GH+ P LHN FR + Y P+ D + F F G SV
Sbjct: 4 LYGIIGWPLGHTMSPTLHNWGFRQSGADAAYAAYPLEPDQIPDFMRRVRDEPFLGLSVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K VM+F D + A + AVNT+ +GKL G NTD I +
Sbjct: 64 PHKRTVMEFLDHMTDRAVRVGAVNTLYW--DEGKLCGENTDVLGLIAPLRHM-------- 113
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
PL +L G A A+ + A + I + E+A++LA + A
Sbjct: 114 ------QPLPASAMILGAGGAARAAVVGFKELGIADIAIANRTGEKAEALAEEFSIRAVA 167
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
+E + +P A++ N TPLGM + P + V+D VY P +TRLL++A
Sbjct: 168 WESRMEEEP---ALICNTTPLGMSGTMETFSPWDAKRFPAGCTVYDIVYNPLETRLLREA 224
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A G VSG+EMFL Q + QF L+TGK+ + R ++L
Sbjct: 225 AAVGCGTVSGLEMFLHQGLAQFRLWTGKDMDEAGARALLLCAL 267
>gi|389856373|ref|YP_006358616.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
gi|353740091|gb|AER21098.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
Length = 289
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 341
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 342 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 392
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D +Y P +T L+K A++ G ++G+ M L QA F +TG+E P + + + ++
Sbjct: 225 LLVADVIYQPFETPLMKHAQSQGNPTINGLGMLLFQAAEAFQAWTGQEMPTDLIWDQLVQ 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|403379143|ref|ZP_10921200.1| shikimate 5-dehydrogenase [Paenibacillus sp. JC66]
Length = 292
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T ++G+ P+ HSK P++ N F N Y + L+ + + F
Sbjct: 10 IDTATVMYGVFGDPIAHSKSPLMLNRAFAEKGLNAAYAAFHIKPGTLRDAVNGIRALGFR 69
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VM + D V A AI AVNTI+ R DGKL GYNTD + ++++
Sbjct: 70 GVNVTIPHKLEVMDYLDHVDEHALAIGAVNTIVNR--DGKLTGYNTDGIGYVRSLKE--- 124
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF-----DIDFERAKS 341
A F G+ VL GAGGA + + + G + +I D ++ AK
Sbjct: 125 -------EAHFAP--KGKTVVLVGAGGAAKGIGYALIQEGVKKLIIANRTPDKAYDLAKD 175
Query: 342 LASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
L + P +I ++ E ++ + T +GMHP+ +P S + + + LV D VY
Sbjct: 176 LQAWTETEGIPLTEIGSYL-EDSELVVHTTRVGMHPHIHDIPFSPQHIHNQLLVSDIVYN 234
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P TRLL +A GA G+ MF+ Q F +TG AP E MRE V A F
Sbjct: 235 PLDTRLLSEARLRGAKTHGGLGMFVYQGAYAFEYWTGLAAPVEAMREAVEASF 287
>gi|422342123|ref|ZP_16423063.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
gi|325474191|gb|EGC77379.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
Length = 771
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 164/365 (44%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 424 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTF 481
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 482 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 541
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT+I
Sbjct: 542 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLIT 601
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 602 E--NKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 655
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 656 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 704
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 705 EPDIYMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 764
Query: 436 FTGKE 440
F GKE
Sbjct: 765 FAGKE 769
>gi|417924193|ref|ZP_12567645.1| shikimate dehydrogenase [Streptococcus mitis SK569]
gi|342836247|gb|EGU70463.1| shikimate dehydrogenase [Streptococcus mitis SK569]
Length = 284
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV + V DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEVSDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF + G L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGEKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEETLRDYQLVF 396
ED+ Q + +L NAT +GM + VP V ETL LV
Sbjct: 170 EKTGFKVDLYALEDVPELQARIAESDLLVNATSVGMDGQSSPVPENIVLPETL----LVA 225
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P +T LK A + G +V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 226 DIIYKPFETPFLKWARSQGNPVVNGLGMLLYQAAAAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|338176104|ref|YP_004652914.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
gi|336480462|emb|CCB87060.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
Length = 674
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 197/434 (45%), Gaps = 30/434 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R + GG + E R+E ++ L Y+D E + +++ + SS + I+S +
Sbjct: 59 RSQAQGGNFNQSEESRVEHIYRLAALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYH 117
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
ETP E+ +L + MQ A K+ + + R+ + +I S+G
Sbjct: 118 NLQETP--ENFDHLYADMQKIPAHFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPN 175
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G +S++L P N + SL P LG + + L + Y+ + + T ++GLI PV
Sbjct: 176 GQISRILGPIVNHPFTFASLDEDPKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVN 235
Query: 185 HSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
S HN + +YV P+ +L F + G SV P K+++M F
Sbjct: 236 LSISDETHNAVLAACGMDAVYVKIPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFI 295
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
D + A+ I AVNT+ + + ++ G+NTD ++ A+E K G +
Sbjct: 296 DHLDVKAEKIGAVNTL--QFKEDQIYGFNTDGMGAMEALET-------KCG-------IQ 339
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
G+ V+ GAGGA RA+A+ A + A V + + E+A +A + ++
Sbjct: 340 GKHVVIIGAGGAARAIAYEAVQKKALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQV 399
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
IL N T + M P++ E + + LV D P+ + L++A G ++ G
Sbjct: 400 GYDILINCTSVPM-------PIAFEDILLHVLVMDIKTKPKVSLFLENALKKGCQVIFGY 452
Query: 423 EMFLRQAIGQFNLF 436
+MF+ QA+GQF L+
Sbjct: 453 QMFIAQALGQFKLW 466
>gi|420158311|ref|ZP_14665132.1| putative shikimate dehydrogenase [Clostridium sp. MSTE9]
gi|394754991|gb|EJF38277.1| putative shikimate dehydrogenase [Clostridium sp. MSTE9]
Length = 303
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 144/286 (50%), Gaps = 20/286 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I+ +TK+ LI P+ S + N ++ N +Y D L + +FA
Sbjct: 3 IDINTKMVTLIGTPLKQSFAAQMQNTGYQAAGLNMVYFYTEADKDHLGDIVNGLRYMNFA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K V+++ DE+ PL Q + A NT+++ P DGKL+GYNTD T++
Sbjct: 63 GFAVTKPNKVRVLRYLDELDPLCQKMGASNTVVKTP-DGKLVGYNTDGIGFYTSL----- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
T G + +F G GGAGRA+ GAR + I D+ AK+L +D
Sbjct: 117 -------TQEGGIKVDQCVFFCFGGGGAGRAMCSVLAYHGARKIYITDVFEPCAKALVAD 169
Query: 346 VMGAARPFEDILNF----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ P + ++ + ++ NA+ +GM + R P+ +E ++ Q FDA Y
Sbjct: 170 INANFAPVAEFVHHGDFSKLSACDVVMNASGVGMGDSIGRSPLPKEYIQPSQFYFDACYN 229
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
P KT+ L DAE G +++G+ M L Q + Q L++G++AP E MR
Sbjct: 230 PEKTQFLLDAEEKGCRVLNGLGMSLYQGVAQIELWSGQKAPVEAMR 275
>gi|72383151|ref|YP_292506.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL2A]
gi|72003001|gb|AAZ58803.1| shikimate dehydrogenase [Prochlorococcus marinus str. NATL2A]
Length = 311
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 36/303 (11%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSS 222
K+ I T + GL+ +PV HS PI+HN + + + YV M + DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCESQDLEKVTKALRF 75
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
DF G ++ P+K+ V+K C+++ ++ I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEISNEIQAVNTLIPE-ENNQWIGANTDVQGFLTPLK 134
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI--------FDI 334
D L + V+ G GG+ RA+ G S + V +I
Sbjct: 135 D---------------HNLKNKNVVVIGCGGSARAVVMGLSSLNVKKVTIIGRNDSSLNI 179
Query: 335 DFERAKSLASDVMGAARPFEDI-LNFQP--EKGAILANATPLGMH---PNTDRVPVSEE- 387
+ ++L S + + LN P ++ ++ N TP+GM+ N + VP+ E
Sbjct: 180 FVKSTRNLLSRRGISIESINNKELNVSPYIQEADLIINTTPIGMNDSKTNQENVPLGREI 239
Query: 388 --TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAPKE 444
L + +++D +YTPR T L+ + + G++M + Q L++G + P +
Sbjct: 240 WDCLSNKTILYDLIYTPRPTNWLQIGQQKNCFTIDGLDMLVEQGAFSIRLWSGFHDVPVQ 299
Query: 445 FMR 447
M+
Sbjct: 300 TMK 302
>gi|291558262|emb|CBL35379.1| Shikimate 5-dehydrogenase [Eubacterium siraeum V10Sc8a]
Length = 300
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 139/294 (47%), Gaps = 32/294 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSP 223
++ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 19 NMTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS- 75
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 76 -LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDCT-------- 124
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKS 341
G+ + G L ++ +L G GG GR +A G + I D D AK+
Sbjct: 125 -----GFTKAVGAMGMTLTNKVLLL-GCGGVGRMMAIETVREGGELTIAVRDADIPVAKA 178
Query: 342 LASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VF 396
L ++ +A+ +L+ ++ NATP+GM+PNTD P++EETL L F
Sbjct: 179 LCEEIKQNYNSAKVGFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEETLGRITLNGFF 238
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
DA+Y PR+T+L+K G VS G++M + QA +++G E E ++ I
Sbjct: 239 DAIYNPRETKLMKMVSDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQTI 292
>gi|166030991|ref|ZP_02233820.1| hypothetical protein DORFOR_00672 [Dorea formicigenerans ATCC
27755]
gi|166029258|gb|EDR48015.1| shikimate dehydrogenase [Dorea formicigenerans ATCC 27755]
Length = 291
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 32/295 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I+ T + LI PVGHS P +HN +F + + Y+ + D + +F
Sbjct: 3 KRISGTTTLLALIGSPVGHSGSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P K V + DE+ P AQ + A NT++ +GKLIG+NTD
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDG---------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD---IDFERAK 340
G+ A G + + L G GGAG A+ GA + +F+ +FE+ +
Sbjct: 111 ---VGFVKNLAEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIHVFNRKGANFEKLE 167
Query: 341 SLASDVMGAARPFEDILNFQPEKGA---------ILANATPLGMHPNTDRVPVSEETL-R 390
+A ++ A + + +K A IL NAT +GM PN + + ++ R
Sbjct: 168 KIAKKILEFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKGTMIQDTSVYR 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
+ +V + +Y P++TR++++A+ AG +V G M L Q F+LFTG+E P E
Sbjct: 228 EDLVVAEIIYNPKETRMMREAKEAGVKCVVGGKGMLLWQGAEAFHLFTGQEMPVE 282
>gi|325270150|ref|ZP_08136757.1| shikimate dehydrogenase [Prevotella multiformis DSM 16608]
gi|324987451|gb|EGC19427.1| shikimate dehydrogenase [Prevotella multiformis DSM 16608]
Length = 250
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + + N +Y+ + + F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFHNEHINAVYINFEIPSIDGFIEVIDSNPELCGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
KE VM + D + P A+AI AVN I + S L G+N+D +IE + ER +K
Sbjct: 64 KEQVMDYLDSLSPEAEAIGAVNVIRVTHKGSKTLLKGFNSDVIGFTRSIEPLL-ERHHKK 122
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
++ G GGA +A+ +G KS G +F +R L D + A
Sbjct: 123 A-------------LILGTGGASKAVNYGLKSLGLE-TMFVSRTKREGVLTYDEVTPALI 168
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDA 411
E ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 169 REY---------NVVVNCTPLGMYPNADVCPALPYEAMDSHTLLYDLLYNPDETLFMAKG 219
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
GA++ +G+EM L QA + + GKE
Sbjct: 220 RERGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|406576618|ref|ZP_11052245.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
gi|404461165|gb|EKA07142.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
Length = 284
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 31/283 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEASDLAETVTNIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 347
SF ++G+ + GAGGA +++ A G ++V +F + E+ + + +
Sbjct: 112 FKSLPSF--TISGKKMAILGAGGAAKSILAQAILDGVSQVSVFVRSVSMEKTRPYLTKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ + Q + K +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDLSDLQEKIAKSDLLVNATSVGMDGQSSPVPESI-VLPETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
Y P +T LK A + G V+G+ M L QA F L+TGKE P
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMP 271
>gi|16800593|ref|NP_470861.1| hypothetical protein lin1525 [Listeria innocua Clip11262]
gi|16413998|emb|CAC96756.1| lin1525 [Listeria innocua Clip11262]
Length = 273
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 231
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFETEIKKLMDS----GVRGFNIT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD----- 345
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTEAKITVANRTTEKAIEMTKDNDNHH 166
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSMMKEAVLEQL 270
>gi|422415991|ref|ZP_16492948.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313623707|gb|EFR93855.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 273
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 231
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEAEVKKLMDS----GVRGFNIT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 345
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHH 166
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 35/274 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 235
+GLI + + HSK +H +FR NYN + LK FF +F G +V PYK
Sbjct: 93 YGLIGESLSHSKSKEIH-ESFRKYNYNLKNIEK--SKLKDFFK---KRNFTGINVTIPYK 146
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
E +K+ D++ PLA+ I AVNTI+ R +GKLIGYNTD G+
Sbjct: 147 ETSLKYLDKIDPLAKEIGAVNTIVNR--NGKLIGYNTDY-------------LGFSYSIK 191
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 355
FG L + ++ G+GGA +++V ++ AK++ + +E+
Sbjct: 192 HFGISLKNKKVLILGSGGA------------SKMVQKFVEDNLAKNVTVISRSSKNNYEN 239
Query: 356 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 415
+ F+ ++ NATP+GM+P+ + + + V D +Y P T+L+ DA+ G
Sbjct: 240 LNKFKD--YNVIINATPVGMYPDNLECKLDLNIFKSLESVVDLIYNPLNTKLILDAKKLG 297
Query: 416 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+SG+ M + QA +F ++ + + E+
Sbjct: 298 LKTMSGLLMLVAQAFYAAEIFLNEKLDENLIEEM 331
>gi|339641659|ref|ZP_08663103.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454928|gb|EGP67543.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 285
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 139/302 (46%), Gaps = 37/302 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I+ T++ G+I+KP+ HS P +HN + N N +Y+ + VD DL K
Sbjct: 3 IDGHTRLAGVIAKPIKHSISPFIHNMAYHLTNTNAVYLALEVDSKDLGKAVENIKLYHML 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYK V++F DE+ A+ I AVNTII R G LIGYNTD ++ D
Sbjct: 63 GANVSMPYKSEVIQFLDELDESAREIGAVNTIINR--HGCLIGYNTDGVGFFKSLPDF-- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-- 344
L G+ + GAGG A+ A G + V F R+K+L+
Sbjct: 119 -------------NLKGKNLTILGAGGGASAIISQAVKEGVKRVFV---FSRSKNLSKTE 162
Query: 345 DVMGA----------ARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
D + + ED+ L+ + A+ NAT +GM+ + +P S +
Sbjct: 163 DRLTQLSKRLSHPIIVQAIEDLSALDTAVGQSALFVNATGVGMNGKSLPIPNSF-IFPKH 221
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D Y P KT L+ A G V+G+ M L QA F L TGK P E ++ +L
Sbjct: 222 ILVADIAYNPMKTPFLQMASEQGLSTVNGLGMLLYQADRAFELMTGKAMPTEPIKNALLK 281
Query: 453 KF 454
F
Sbjct: 282 HF 283
>gi|309775585|ref|ZP_07670585.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916679|gb|EFP62419.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 290
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 148/303 (48%), Gaps = 30/303 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I+ T++ GLI+ P+ HSK P +HN F + + Y+ V ++L+ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + ++ D + P A+ AVNT++ +G+L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVN--DNGELTGHITDGIGYMRSLKDA 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
G + G+ + GAGGA A+ G + + IF D +ERA+
Sbjct: 121 -------------GIDVVGKKVTIVGAGGAATAIEIQMALDGVKELSIFNRRDEFWERAE 167
Query: 341 SLASDV---MGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
++ D+ L + E + ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTSCKATLYDLADTAALKQEIEDSYLFANATGVGMKPLEGQMVIPDASFLRK 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY P +T LL+ A+ G ++G+ M L Q F L+TGKE P ++M+EI+
Sbjct: 228 ELIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILD 287
Query: 452 AKF 454
F
Sbjct: 288 IHF 290
>gi|449102531|ref|ZP_21739279.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
gi|448966120|gb|EMB46778.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
Length = 493
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 164/365 (44%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQALIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I A+NT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAINTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -SENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIYMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|374851393|dbj|BAL54354.1| quinate/shikimate 5-dehydrogenase [uncultured Chloroflexi
bacterium]
Length = 265
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 230
T+ GLI P+GHS P LH F + Y +P+ + L + + + + GF+V
Sbjct: 2 TERVGLIGWPLGHSLSPFLHQRAFAACGLDWRYDLLPVEAETLAERIQEWVAQGYRGFNV 61
Query: 231 GFPYKEAVMKFC--DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
P+K V++ + +A+ A NT++R DG L NTD
Sbjct: 62 TIPHKRRVLELALITQRSAEVEALQAANTLVRL-EDGSLRAENTDW-------------L 107
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASDVM 347
G+ + G +AG ++ G GG+ +A+A+ + GA + F R + ++ DV+
Sbjct: 108 GFLQDLQAHGVEVAGASCLILGTGGSAQAVAYALECSGAAEIAFLSRSPRHPRHVSWDVL 167
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAVYTPRKTR 406
R +D L E+ ++ N TPLGM+P + P E+ L +V+D VY PR+TR
Sbjct: 168 ---RRSQDWL----ERVKLVVNCTPLGMYPQVESSPWPEDLPLPPQAIVYDLVYNPRRTR 220
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
L+ AE G + G+ M LRQA F L+TG+E
Sbjct: 221 FLEQAEKQGLPAIGGIGMLLRQAALSFTLWTGRE 254
>gi|365853974|ref|ZP_09394229.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
gi|363711647|gb|EHL95371.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
Length = 296
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 31/303 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
V+ I+ T + GL++ P+ HS P +HN +F + N Y+ V +L + S
Sbjct: 2 VDRIDGHTILIGLMAYPIRHSMSPTMHNTSFVKLGLNYAYLAFEVGNKELPDAIQSIRSL 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
G ++ P K+ V+ D++ P+A+ + AVNTI+ DG L GY TD
Sbjct: 62 GMRGSNISMPNKQKVIPLLDKLDPVAKMVGAVNTIVN--DDGVLTGYTTDG--------- 110
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI------DF 336
G+ A + G ++GAGGAG A+ A + G + + IF+I +
Sbjct: 111 ----TGFMKSLADENLDIRGEKMTISGAGGAGTAIEIQAANDGVKEMSIFNIKDATWANA 166
Query: 337 ERAKSLASDVMGAARPFEDILN---FQPE--KGAILANATPLGMHPNTDRVPVSEET-LR 390
ER + ++ D+ + F+ E AI ++T +GM P D+ VS+ +
Sbjct: 167 ERNVKIINEQTDCKAQLFDLADQDAFKREIADSAIYCDSTGVGMKPLEDKTLVSDPSFFH 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+V+D VY PR T+L+ AE AG + +G+ M L Q F L+TG++ P +++R I
Sbjct: 227 KDMIVYDTVYAPRTTKLMTVAEEAGVNHVFNGLGMMLEQGAEAFKLWTGEDMPVDYIRNI 286
Query: 450 VLA 452
+ +
Sbjct: 287 LFS 289
>gi|295703111|ref|YP_003596186.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294800770|gb|ADF37836.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 298
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 33/301 (10%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 223
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 284 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 332
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKEHGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 333 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 387
I E K ++ + D L + + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDRLREEIKTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LR +V D VY P +++LL+ AE+ G ++G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 448 E 448
E
Sbjct: 289 E 289
>gi|383811576|ref|ZP_09967039.1| putative shikimate dehydrogenase [Prevotella sp. oral taxon 306
str. F0472]
gi|383355819|gb|EID33340.1| putative shikimate dehydrogenase [Prevotella sp. oral taxon 306
str. F0472]
Length = 250
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + N N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFDNENINARYINFEIPSIEDFIEVIDSNPELRGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYK 291
KE V+ + D + P A AI AVN +IR GK L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEATAIGAVN-VIRVTHKGKKTQLKGFNSDVIGFTRSIEPLL-ERHHK 121
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
++ G GGA +A+ +G +S G K ++
Sbjct: 122 KA-------------LILGTGGASKAIDYGLRSLGL----------ETKFVSRTKRDGIL 158
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKD 410
+EDI +K ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 159 CYEDITADIIQKYNVIVNCTPLGMYPNVDSCPKLPYEAMDSHTLLYDLLYNPDETLFMTK 218
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
GA++ +G+EM L QA + + G E
Sbjct: 219 GREQGAVVKNGLEMLLLQAFASWEFWNGDE 248
>gi|417915530|ref|ZP_12559139.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. SK95]
gi|342833369|gb|EGU67650.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. SK95]
Length = 284
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAVDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + D++ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDKLSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF ++G+ + GAGGA +++ A G V + + E+ K + +
Sbjct: 112 FKSLPSF--TISGKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTKPYLTKLQ 169
Query: 348 GAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVHLCALEDVSELQSRIADSHLLVNATSVGMDGQSSPVPESI-NLPETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|313895569|ref|ZP_07829125.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975695|gb|EFR41154.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 286
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G++ P+ HS P+L N R + +YV P+ D L+ F
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKRDALRSAVLGLRDAGFC 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDALDEDARRIGAVNTVVV-GADGRLTGHNTDAA----------- 109
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 345
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAYVVVLGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 346 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
YTP +TR L++A G V+G M Q F L+TG MR ++
Sbjct: 228 YTPAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWTGVRPDLLCMRRVL 278
>gi|307701915|ref|ZP_07638924.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
gi|307616730|gb|EFN95918.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
Length = 284
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F + NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATDTNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVISYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKSLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MKKT 161
Query: 351 RPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEET 388
RP+ ED+ Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLNKLQEQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLSET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYKPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|403668288|ref|ZP_10933563.1| shikimate dehydrogenase [Kurthia sp. JC8E]
Length = 279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K + +I P+ HS P +HN + Y+P+ V + L+ F +GF+V
Sbjct: 5 KWYAVIGDPIEHSMSPFMHNLWMTSEGRDATYIPLHVSRESLRASFEGMKVLGCSGFNVT 64
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ DEV LA+ + AVNT++R+ +DGK GYNTD + ++ED +
Sbjct: 65 IPHKEAIIPLLDEVDALAEKMGAVNTVVRQ-ADGKYKGYNTDGLGFVRSLEDVV------ 117
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAA 350
G+ ++ GAGGA R + F G R + I + E+A+++ ++ +
Sbjct: 118 ------GTSHKQEKVLVLGAGGASRGICFALWQEGYRDITIANRTVEKARAICLEMDPSV 171
Query: 351 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
+ + E GA I+ T G++ + +P+S E L + +V D VY P T L
Sbjct: 172 KAC-SLQQASDELGAYGIVIQTTSAGLNHSQFALPISLEHLANTAIVADIVYNPLMTPFL 230
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
+ ++ GA +V+G+ MF+ Q + +T
Sbjct: 231 EQSQKQGATVVTGLGMFIHQGALAYEHWT 259
>gi|144899674|emb|CAM76538.1| Quinate/Shikimate 5-dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ K+ G++ PVGHS+ P LH + +G YVP+ V +D F FA
Sbjct: 3 LSGKAKLAGVLGWPVGHSRSPRLHGYWLERLGIDGAYVPLPVRPEDFASVFRALPKMGFA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASI-TAIEDAI 285
G +V P+KE + DEV PLA+ I AVNT++ R DG ++G NTD + +E
Sbjct: 63 GANVTVPHKEQALILADEVEPLAKRIGAVNTLVVR-EDGSILGLNTDAFGFMQNLLETHP 121
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
GY N R V+ GAGGA RA+ G + + + ERA+ LA+
Sbjct: 122 ASLGYLN-----------RPAVVLGAGGAARAVIAALADAGVPEIRLVNRSLERAEKLAA 170
Query: 345 DVMGAARPFEDILNFQPEKGAILANATPLGM--HPNTDRVPVSEETLRDYQLVFDAVYTP 402
++ G R + +L N T LGM P D + L +V D VY P
Sbjct: 171 EIGGPIR-VQQWDRLDLAGAGLLVNTTSLGMTGQPPLD---LDLSALPQDAVVNDIVYAP 226
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
R T LL A+A G +V G+ M L QA+ F+L+ G++
Sbjct: 227 RVTDLLLRAQARGNPVVDGLGMLLWQAVRGFSLWFGQQ 264
>gi|269925229|ref|YP_003321852.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269788889|gb|ACZ41030.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
Length = 289
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 40/295 (13%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K G+I P+ HS P+ F + IY V +DL+ FF + ++ G +V
Sbjct: 2 KQVGVIGYPIKHSISPVFQQAAFDALGIEAIYKAYEVPPEDLRSFFFNLRNGNWLGVNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A K DE A NTII +G+L +NTD I A+E E G++
Sbjct: 62 IPHKSAAAKLADERSQEVSFTGAANTIISM--NGRLKAHNTDISGFILALE----ENGFQ 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ + V+ G+GG RA+ + A + + ++ SL S++
Sbjct: 116 ---------IKSKRAVVLGSGGTTRAVVYALAICEAQSIAVIGRSQDKVHSLISEL---- 162
Query: 351 RPF--------------EDILNFQPEKGAILANATPLGMHPNTDR---VPVSEETLRDYQ 393
+PF +D + Q + IL N TP+GM TD+ PVS+E L
Sbjct: 163 KPFFEHKQVTVTGHSWEKDSIRRQIQNSDILINTTPIGMK-GTDQEHLSPVSKEDLSSDL 221
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+VFD VY P T LL A+ GA +SG+EM + Q F L+TG+E P + MR+
Sbjct: 222 IVFDVVYNPIMTPLLTYAKDVGASTISGIEMLIYQGAESFRLWTGQEPPVDIMRK 276
>gi|153831888|ref|ZP_01984555.1| shikimate dehydrogenase [Vibrio harveyi HY01]
gi|148871886|gb|EDL70709.1| shikimate dehydrogenase [Vibrio harveyi HY01]
Length = 279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 29/278 (10%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIY-VPMFVDD----LKKFFSTYSSPDFAGFSVGF 232
LI + + S+ P HN R +N + +Y + FV D L+K D ++ +
Sbjct: 6 LIGQNIQRSQSPSFHNQLARELNVDLLYQLEEFVTDSCETLQKRTQQLFDNDIDSANITY 65
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
PYKE ++ D++ P AQ + A NT+I+R + K++ +NTD I A +
Sbjct: 66 PYKEQILAVADQISPCAQRVNAANTLIKR--NNKIVAFNTDYSGFIAAFQ---------- 113
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS-----DV 346
F L G + VL G GG G+AL F GA ++ ++D D + K LA D+
Sbjct: 114 ---QFECQLPGHV-VLIGCGGVGKALCFSLVDLGATQIALYDHDENKMKQLAESLNKEDI 169
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
++ ++ +L N TP+G H +T P+ + L VFDAVYTP +T
Sbjct: 170 NTVCLDASNLADYVMNADGVL-NCTPVG-HYSTPGCPIEQSWLETQSWVFDAVYTPHETE 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
L A+ +SG E+F QA F LFTG +E
Sbjct: 228 FLLAAKHKYIPTLSGFELFFYQAHDAFKLFTGVTPTQE 265
>gi|146318905|ref|YP_001198617.1| shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|146321113|ref|YP_001200824.1| shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|253751980|ref|YP_003025121.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|253753805|ref|YP_003026946.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|253755319|ref|YP_003028459.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|386578100|ref|YP_006074506.1| shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|386580154|ref|YP_006076559.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|386582177|ref|YP_006078581.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|386588364|ref|YP_006084765.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|403061736|ref|YP_006649952.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
gi|166219225|sp|A4W235.1|AROE_STRS2 RecName: Full=Shikimate dehydrogenase
gi|166219227|sp|A4VVS8.1|AROE_STRSY RecName: Full=Shikimate dehydrogenase
gi|145689711|gb|ABP90217.1| Shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|145691919|gb|ABP92424.1| Shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|251816269|emb|CAZ51897.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|251817783|emb|CAZ55535.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|251820051|emb|CAR46278.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|292558563|gb|ADE31564.1| Shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|319758346|gb|ADV70288.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|353734323|gb|AER15333.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|354985525|gb|AER44423.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|402809062|gb|AFR00554.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
Length = 289
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 341
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 342 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 392
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIARATGVPMQILALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
LV D +Y P +T LLK A++ G ++G+ M L QA F +TG+E P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQSWTGQEMPTDLIWDQLVQ 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|254432172|ref|ZP_05045875.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
gi|197626625|gb|EDY39184.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
Length = 295
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 135/299 (45%), Gaps = 36/299 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I+A T + G++ PV HS P +HN + + IY+ P +L + D
Sbjct: 5 ISASTALVGVLGDPVRHSLSPAMHNAALAALGLDWIYLALPTPAGELAAVVHALEALDCR 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAV C E+ PLA + AVNT++RR + G L G NTD E + +
Sbjct: 65 GLNVTLPHKEAVAACCAELSPLAARVGAVNTLVRRQAGGWL-GTNTDVEGFLAPLR---- 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ G A GS R VL G GG+ RA+ G G + + +A +L
Sbjct: 120 ----REGHAWQGS----RAVVL-GCGGSARAVVAGLVELGCGAI--AVAGRQAANLERFA 168
Query: 347 MGAARPFEDILNFQPEK--------GAILANATPLGMHPNTD-----RVPVSE---ETLR 390
G R + L+ +L N TP+GM TD P+ E L
Sbjct: 169 AG-CRAWAPQLSLHAWHRLGELLPGCQLLVNTTPVGMASPTDPAAARACPLDEAGLAALT 227
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 448
V+D +YTPR ++LL+ A G + G+EM ++Q L++G A P E MRE
Sbjct: 228 PQAWVYDLIYTPRPSQLLRRAAGRGCRTLDGLEMLVQQGAASLRLWSGTAAVPVEAMRE 286
>gi|164688577|ref|ZP_02212605.1| hypothetical protein CLOBAR_02222 [Clostridium bartlettii DSM
16795]
gi|164602990|gb|EDQ96455.1| putative shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 289
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFR--HVNYNGIYVPMFVDDLKKFFSTYSSPDF 225
I+ T + GLI PVGHS P ++N +F ++Y + + V+ + + + + +
Sbjct: 2 EISGRTGLLGLIGSPVGHSGSPAMYNYSFEILDLDYKYLAFDIPVEKTEDAVNAFRTFNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V K+ DE+ P ++ I A NTII + DGKLIG TD
Sbjct: 62 KGGNVTMPCKGEVAKYMDELSPASRIIGACNTIINK--DGKLIGDITDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 340
+GY G + G+ + GAGGA A+ A GAR + IF D FE+A+
Sbjct: 109 --KGYVRNLKENGVDIKGKKMTIMGAGGAATAIQVQAALDGAREISIFNKKDAFFEKAQK 166
Query: 341 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 391
S+ +V DI L + IL NAT +GM P + + + ++ R
Sbjct: 167 TVESIKKEVPDCIVNLFDIDDTETLYAEIATSDILTNATLIGMKPYDNETNIKDTSVFRK 226
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+V D VY P KT+++ DAE AG ++ G M L Q + F LF E P E ++
Sbjct: 227 DLVVTDVVYNPIKTKMILDAEEAGCKVIGGKGMLLYQGVEAFKLFMECEMPVEEVK 282
>gi|427393579|ref|ZP_18887357.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
gi|425730580|gb|EKU93415.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
Length = 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 35/274 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 235
+GLI + HSK +H F + +Y + +P DL+ F S F G +V PYK
Sbjct: 20 YGLIGASLSHSKSQEIHE-AFGYYSYRLVNIP--AQDLEAFMKQRS---FKGINVTIPYK 73
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
E VM + D V P AQ I AVNTI+ + +G L+GYNTD G+ +
Sbjct: 74 ETVMYYLDYVDPRAQEIGAVNTIVNQ--NGHLLGYNTDY-------------LGFAHSLK 118
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 355
++G L G+ ++ G+GGA + + AK A+ +I V+ + P +
Sbjct: 119 AYGIHLKGKKVMVLGSGGASKMVQTYAKDHSAQEII--------------VISRSGPKDY 164
Query: 356 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 415
+ Q + + NATP+GM+P+ + + V D +Y P KT+LL +A+ G
Sbjct: 165 YMLDQFQDFDTIINATPVGMYPHNLESKIDLANFQHLDSVIDLIYNPLKTKLLLEAKEKG 224
Query: 416 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
I+SG+ M + QA +FTG++ + + +
Sbjct: 225 VKIMSGLLMLVAQAFYACQIFTGQDLEEALLAHV 258
>gi|448355080|ref|ZP_21543834.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
gi|445636424|gb|ELY89586.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
Length = 278
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 132/294 (44%), Gaps = 30/294 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS+ P +H + + Y+ YV D DL+ + + G +V
Sbjct: 2 DVFGLLGNPVGHSRSPPMHEAAYDELAYDARYVTFEPDPSDLETAVAGADALGITGLNVT 61
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAI-E 282
P+K+ V+ D V P LA I AVNTI P S G + G+NTD ++ A+ E
Sbjct: 62 IPFKQDVLAL-DLVEPDDLATRIGAVNTIDFEPDSSRPNSSGHVTGHNTDAAGALRALRE 120
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 342
+ G G F LA AG A V I + A L
Sbjct: 121 HDVTAAGADAVVVGAGGAGRAISFALADAG--------------ATVTIANRTESTAHEL 166
Query: 343 ASDVMGAAR--PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
A DV A E +L IL NAT +GM D PV L V DAVY
Sbjct: 167 ADDVPNATGYGLGEGVLESLLADADILVNATSVGME--EDATPVPAGALHVDLAVMDAVY 224
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLL+DA AAGA V G M L Q + F L+TG++AP + M E + A+
Sbjct: 225 QPLETRLLRDAAAAGATTVDGAWMLLYQGVEAFELWTGRDAPVDVMNEALRAQL 278
>gi|86136752|ref|ZP_01055330.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
gi|85826076|gb|EAQ46273.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
Length = 277
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 234
G+I PV HSK P L + G YVPM V+ DL+ T F G +V P+
Sbjct: 10 GVIGCPVAHSKSPQLQTHWLKTHGIAGHYVPMHVEPEDLETVIRTLPKAGFVGVNVTIPH 69
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
KEAVMK D+V A+ + A NTII R SDG ++ NTD IT ++
Sbjct: 70 KEAVMKIADKVTDRAKLMGAANTIIFR-SDGSILADNTDGYGFITNLQQG---------- 118
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPF 353
A P +G VL GAGGA RA+ G +++ + ERA+ L SD +
Sbjct: 119 APDWVPTSGPAAVL-GAGGACRAVVASLIEAGVPEILLTNRTRERAEQLHSDFGKRIQVV 177
Query: 354 EDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+ +L E A++ N T LGM R+ V + L+ +V D +Y+P KT LL+ AE
Sbjct: 178 DWVLAGNIIEDAALVVNTTSLGM-VGKPRLRVPLDGLKPNMVVTDLIYSPLKTNLLQTAE 236
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
G +V G+ M L QA+ F + G+
Sbjct: 237 EMGCTVVDGLGMLLHQAVPGFERWFGQR 264
>gi|110596793|ref|ZP_01385083.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
gi|110341480|gb|EAT59940.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
Length = 290
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 32/296 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSV 230
K+ GLI + V +S P++HN ++ Y + D + + AGF+V
Sbjct: 6 KILGLIGRAVDYSWSPLIHNTASELLDLPYCYTIFNIADPEMIGDALRGAKALGIAGFNV 65
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYK+ V+ F DE+ A I AVNTII R DGK+ G+NTD E G+
Sbjct: 66 TIPYKKTVVPFLDELSREAATIGAVNTIIIR--DGKMTGHNTDIE-------------GF 110
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLA----- 343
+ S + G + G GGA A AF +++++ D E+A ++
Sbjct: 111 ATPLKPYASLIEGNPVSVFGCGGAALAAIEAFRLFFSPRKIMVYARDPEKATAMLDGYEY 170
Query: 344 SDVMGAARPFEDILNFQPEKGAILANATPLGMHP-NTDR----VPVSEETLRDYQLVFDA 398
+++ + ++ Q A++ NATP+G N D+ VP+ E + Q+V+D
Sbjct: 171 KELVTICH--QRLVEEQLRSCAVMVNATPIGTKGGNNDQTESIVPLDRELIHKGQIVYDM 228
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
VY P T LL +A+ GA +SG+EM + QA F L+TGK P E ++++++ +
Sbjct: 229 VYNPLDTPLLLEAKRKGATTISGIEMLIGQAALSFALWTGKAMPVEAVKKVIMQEI 284
>gi|404482073|ref|ZP_11017301.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344769|gb|EJZ71125.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 289
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 24/290 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 227
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
F+V PYK+ ++ ++ A+ I A+NT+I+ + K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDDRAKKIGAINTLIKTENGYK--GYNTDIIGLGMSL------ 113
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDV 346
Y N + + G+ ++ GAGGA +A+ + A G + + + + + +AK L ++V
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELKAEV 166
Query: 347 ------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-QLVFDAV 399
+ + + +N + + T +GMHPN + + EE + D +
Sbjct: 167 GIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLI 226
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
YTP +T +K ++ G I ++G++M + Q + F ++ + K+ + ++
Sbjct: 227 YTPFETSFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|388545085|ref|ZP_10148369.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
gi|388276725|gb|EIK96303.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
Length = 271
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 22/265 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + + +V V+D + + G +V PYK+AVM D + AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVTAIRTLGVRGMNVSMPYKQAVMPHLDAIDESAQ 82
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNTI DG L GYNTD ++ A+++ + L G+ + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTR--------------LNGKRVAIVG 126
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 370
AGGA RA+ +G GA+V +F+ ER LA + A+ + +F + I+ NA
Sbjct: 127 AGGAARAVVYGCTQAGAQVTVFNRSAERGSELAQSL--GAQWGGAVEHFHAKAFDIVINA 184
Query: 371 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
T +G P+++ + + L+ + +V D + P +T LL+ A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLQSHLIVMDVAFMPVQTALLRQARTLGCGTVAGTRMLVHQA 241
Query: 430 IGQFNLFTGKEAPKEFMREIVLAKF 454
Q L+TG +AP + M + +L +
Sbjct: 242 CRQIELYTGHDAPIDVMEQAMLQEI 266
>gi|310659677|ref|YP_003937398.1| Shikimate dehydrogenase [[Clostridium] sticklandii]
gi|308826455|emb|CBH22493.1| Shikimate dehydrogenase [[Clostridium] sticklandii]
Length = 278
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 22/269 (8%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
FGLI K + HS +LH + G Y V+ +L+K ++ + AG +V P
Sbjct: 6 FGLIGKTLDHSISDVLHQEIMKEAGIKGSYGMFEVEPENLEKVIASIRVLNIAGLNVTIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YK+ +M++ DE+ A I AVNTI + + K IG NTD + G+K
Sbjct: 66 YKQDIMRYLDEIDQKAIEIGAVNTITLK--ENKAIGTNTDYD-------------GFKLC 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
G ++ F L GAGGA +A + + +++ + + ++ K D P
Sbjct: 111 LDKAGISISKNGFTLLGAGGAAKAVIKVLQDEQASKITLISRNPDKTKLEYPDF--EILP 168
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+++I + + L N TP+G +PN + P+ +E ++ Y V D +Y P+KT+LLK A+
Sbjct: 169 YDEIHEIKDK--YCLINCTPVGTYPNIEECPIKKEDIKKYSNVVDLIYNPQKTKLLKLAD 226
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEA 441
G ++G+ M + QAI ++ K+A
Sbjct: 227 EYGINNINGLYMLIGQAIKAQEIWASKQA 255
>gi|300711893|ref|YP_003737707.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448295583|ref|ZP_21485647.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299125576|gb|ADJ15915.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445583682|gb|ELY38011.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 273
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 137/286 (47%), Gaps = 29/286 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 232
V+GL+ PVGHS P +H +R + + YV D L+ S S+ G +V
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYRELGMDARYVTFEPDPESLEAAISGASALGIKGLNVTI 62
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K+ V+ E+ LA I AVNTI G GYNTD + A+E
Sbjct: 63 PFKQEVLTLV-ELDDLADRIGAVNTI---DLTGTPTGYNTDAAGARRALE---------- 108
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGA 349
L G VL GAGGA RA+AF GA + I + ERA+ LA+ V G
Sbjct: 109 ---RHDVDLDGARAVLIGAGGAARAIAFVLADEGATIQIANRTKERAEELATAVPQTTGH 165
Query: 350 ARP-FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
P D+L E +L NAT +GM TD PV E+L + V D VY P +TRLL
Sbjct: 166 GLPDLPDLL----ENADVLINATSVGME--TDTSPVPAESLHRHLTVMDVVYRPLETRLL 219
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+DA+ GA V G M L Q + +TG+EAP E M E + +
Sbjct: 220 RDAKQTGAETVDGGWMLLYQGVEALERWTGREAPVEAMNETLRGEL 265
>gi|427711504|ref|YP_007060128.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
gi|427375633|gb|AFY59585.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
Length = 290
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 31/300 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T++ G+I PV HS P++HN + + +Y+P + DL+ S
Sbjct: 3 IRGTTQLLGVIGYPVKHSLSPVIHNAALESLELDYVYLPFSIAPGDLETALSGMLVIGVQ 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+A++ V PL + AVNT+ R G IG NTD + ++
Sbjct: 63 GFNITIPHKQAIIPCLKSVSPLVDQVGAVNTVKRE--AGAWIGTNTDVAGFLAPLQAL-- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+ N T +L G GGA RA+ G A + + D + ++ +
Sbjct: 119 NLNWSNQTG-----------LLLGCGGAARAVVVACWQLGLAELTVSGRDLAKLQAFQAS 167
Query: 346 VMGAARPFEDILNFQPEKG--------AILANATPLGMHPNTDRVPVSEETLRDY---QL 394
P L P +G A++ N+TPLGM P + P++ + L +
Sbjct: 168 WQDILPP--GFLKVVPWEGWAKELAAAALVVNSTPLGMAPEMNHSPLAPKDLDQLPASAI 225
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
++D +YTP T+LL + G + G+EM ++Q F + G+ AP + MR A+
Sbjct: 226 IYDLIYTPNPTQLLAWGQERGLKTIDGLEMLIQQGAAAFQWWLGQPAPVDVMRAQAWARL 285
>gi|358464538|ref|ZP_09174502.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357066938|gb|EHI77071.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 284
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF ++ + + GAGGA +++ A G V + + E+ + + +
Sbjct: 112 FKSLPSF--KISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLNKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q K +L NAT +GM + VP S D LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQERIAKSDLLVNATSVGMDDQSSPVPTSIVLPEDL-LVADVI 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|354594119|ref|ZP_09012162.1| shikimate dehydrogenase [Commensalibacter intestini A911]
gi|353673230|gb|EHD14926.1| shikimate dehydrogenase [Commensalibacter intestini A911]
Length = 279
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 134/274 (48%), Gaps = 21/274 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I K+ ++ P+ HS+ P+LHN + +G Y+P+ V +D K + F
Sbjct: 4 ITGKAKIAAVLGWPIEHSRSPLLHNFWLQRHQIDGAYIPLAVKAEDFKNVIQGMKAAGFK 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEA + CD V A+ + +VNT + DGK+ G +TD + + ++DA
Sbjct: 64 GCNVTIPHKEAAYQCCDIVDETAKKMGSVNT-LWFTEDGKIHGTSTDGDGFVANLKDA-- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
L + ++ GAGGA R++A+ GA++ I + +RA+ L D
Sbjct: 121 -----------DVTLTDKKVLILGAGGAARSVAYSLIQDGAQITITNRTLQRAEQLVRD- 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
+GA + E ++ E G +L N T LGM D + + +D +V D VY PR
Sbjct: 169 LGAGQIIE-WQSWIKELGQFDVLVNTTSLGMEGKDDYLFDLQHASKDL-VVTDIVYVPRI 226
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
T LL+ AE G V G+ M L QA F+ + G
Sbjct: 227 TPLLEAAELKGLKTVEGLGMLLHQARLGFSKWFG 260
>gi|293400587|ref|ZP_06644732.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305613|gb|EFE46857.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 290
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 30/303 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HSK P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSKSPTMHNEAFAKLGLDYAYLAFEVGNEQLEDAVKGFKALS 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + K+ D + P A+ AVNT++ G L G+ TD + A++D
Sbjct: 63 VRGWNVSMPNKTVIGKYLDHLSPAAELCGAVNTVVN--DHGVLTGHITDGIGYMRALKDN 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
+ G+ + GAGGA A+ A G + + +F D +ERA+
Sbjct: 121 -------------NIDVIGKKMTIVGAGGAATAIEIQAALDGVKELSVFNRKDEFWERAQ 167
Query: 341 SLASDV---MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRD 391
++ D+ + + + I ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTNCKATLYDLADTESLRREIADSYLFANATGVGMKPLEGQMVIPDASFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY P KT+LL+ AE+ G ++G+ M L Q F ++TGKE P E+M+EI+
Sbjct: 228 ELIVTDVVYMPEKTKLLEVAESVGCKNMNGMGMMLYQGAAAFEMWTGKEMPIEYMKEILN 287
Query: 452 AKF 454
F
Sbjct: 288 IHF 290
>gi|242238828|ref|YP_002987009.1| quinate/shikimate dehydrogenase [Dickeya dadantii Ech703]
gi|242130885|gb|ACS85187.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech703]
Length = 289
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNP---------TFRHVNYNGIYVPMFVDDLKKFFST 219
+ A ++ GL++ P+ HS P + N T+ + PM ++ LK
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALDKEGLPYTYMAFEVDNESFPMAIEGLKAL--- 59
Query: 220 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 279
G V P K+ ++ DE+ P A+ + A+NTI+ +G L GYNTD I
Sbjct: 60 ----KMRGTGVSMPNKQLACEYVDELTPAARLVGAINTIVN--DNGYLKGYNTDGTGHIR 113
Query: 280 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 335
AI KE G+ + G+ VL GAGGA A+ A G + + D
Sbjct: 114 AI----KESGFD---------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRKDEF 160
Query: 336 FERAKSLASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP 383
+E+A A V +G + F D + IL N T LGM P + P
Sbjct: 161 YEKALDFAKRVNENTDCTVTVHDLGDQQAFADAI----ATADILTNGTKLGMKPLENESP 216
Query: 384 VSEET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
V+++T LR LV + VY P T+LL+ A+ G V G M L Q QF L+TGK+ P
Sbjct: 217 VTDKTMLRPELLVTECVYNPHITKLLQMAQDVGCKTVDGYGMLLWQGAEQFKLWTGKDFP 276
Query: 443 KEFMRE 448
E+++E
Sbjct: 277 LEYIKE 282
>gi|42527148|ref|NP_972246.1| 3-dehydroquinate dehydratase [Treponema denticola ATCC 35405]
gi|449111792|ref|ZP_21748361.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|449113401|ref|ZP_21749906.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
gi|41817572|gb|AAS12157.1| 3-dehydroquinate dehydratase, type 1, putative/shikimate
5-dehydrogenase, putative [Treponema denticola ATCC
35405]
gi|448957063|gb|EMB37816.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|448959611|gb|EMB40330.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
Length = 493
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 164/365 (44%), Gaps = 32/365 (8%)
Query: 89 ADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS 145
DI KL F+ +ND++E+ + +L+ + + I +G GL S++LS K N +VY
Sbjct: 146 TDIPKLAFTANCLNDVSELFKASKLIKNQEY--ILSVMGPYGLSSRILSNKLNSQIVYTF 203
Query: 146 L-----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
K L E+L + Y I+ +T ++G+I K V S P +HN F+ N
Sbjct: 204 TPEYIKKNKLEQELIDPETLEELYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKN 263
Query: 201 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
N +Y+P+ K+ + G SV P+K ++ + + ++ I AVNT++
Sbjct: 264 LNSVYIPISAVSSKEALDFANLLKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV- 322
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRA 317
+ K GYNTD + A+ + + E R YK G V++ G
Sbjct: 323 -SENKKWFGYNTDVDGFQQALMEFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG---- 377
Query: 318 LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG--AILANATPLGM 375
+ IF+ E+AK++A + D +N + ++ T GM
Sbjct: 378 ----------KACIFNRTAEKAKNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGM 426
Query: 376 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 435
P+ P++ T + VF+ +Y P T++LK A AG + +G +M QA QF
Sbjct: 427 EPDIYMDPLNFYTFTGKEKVFELIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKA 486
Query: 436 FTGKE 440
F GKE
Sbjct: 487 FAGKE 491
>gi|389577330|ref|ZP_10167358.1| shikimate 5-dehydrogenase [Eubacterium cellulosolvens 6]
gi|389312815|gb|EIM57748.1| shikimate 5-dehydrogenase [Eubacterium cellulosolvens 6]
Length = 289
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 144/298 (48%), Gaps = 31/298 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I T + GL+ PV HS P++HN +FRH+ + +Y+ V DLK+ +
Sbjct: 3 DSITGRTGLTGLLGSPVSHSLSPMMHNDSFRHLGLDYVYLCFDVGEKDLKEAVNGLKICG 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF++ P K + + D + P A I AVNT++ +G+L G+NTD
Sbjct: 63 IRGFNLTMPDKNRMTELADSLSPAAALIGAVNTVVN--DNGRLTGHNTD----------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID----FERA 339
G+ A +G G+ L GAGGA A+A A G + IF +R
Sbjct: 110 --GIGFMRSLADYGFSPKGKKVTLLGAGGASTAIAAQAALDGVEELTIFARPQSRFHDRT 167
Query: 340 KSLASDV--MGAAR-PFEDILNFQPEKG-----AILANATPLGMHPNTDRVPVSEETLRD 391
L D+ A R ED+ + + ++L N TP+GM P+TD +++ ++
Sbjct: 168 LRLVEDINRQTACRCSLEDLADTSTLRATLADSSLLVNGTPVGMAPDTDACLINDTSMFH 227
Query: 392 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L V D +Y PR+TRLL+ A+ AG +G+ M L Q F L+TG+E P ++E
Sbjct: 228 EDLFVSDIIYNPRETRLLRMAKEAGCRTSNGLFMLLYQGAEAFRLWTGQEMPVSIIKE 285
>gi|118575407|ref|YP_875150.1| shikimate 5-dehydrogenase [Cenarchaeum symbiosum A]
gi|118193928|gb|ABK76846.1| shikimate 5-dehydrogenase [Cenarchaeum symbiosum A]
Length = 268
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 30/287 (10%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYK 235
+I P+ HS P LHN F + + Y+ + +L++ + GF+V P+K
Sbjct: 1 MIGDPINHSLSPTLHNAAFMELGMDCTYIAYRIPRGELEEGIGSLKDTGVEGFNVTIPHK 60
Query: 236 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 295
AVMK+ D + A NT+ + DG L GYNTD + D IK+RG
Sbjct: 61 VAVMKYMDRLDETCSMAGAANTVSIK--DGVLKGYNTD----MGGFLDPIKKRGIG---- 110
Query: 296 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER--------AKSLASDVM 347
+ G ++ GAGGA RA+ GAR + ++ A+ L +D +
Sbjct: 111 -----IEGTEALVLGAGGAARAVTVALAGEGARRITIANRTQQGAREIALLARRLGADAV 165
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
A ED+ + + N TP+GM VP EE+++D +V+D VY P +T +
Sbjct: 166 PA--DLEDVGRLA-RRSKFIVNCTPVGMGGEPSLVP--EESIQDTSVVYDIVYMPLETDM 220
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+K A+A A+ + G EM L QA F ++ EAP + M+++++
Sbjct: 221 IKKAKARNAVYIRGFEMLLGQACRAFEIWHEVEAPYKAMKQMMVGDL 267
>gi|410670626|ref|YP_006922997.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
gi|409169754|gb|AFV23629.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
Length = 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 141/283 (49%), Gaps = 24/283 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
VF + PVGHS P +HN F + Y V ++LK + + F G ++
Sbjct: 4 VFAVFGDPVGHSLSPAMHNAAFEALGMECTYHAFKVGRENLKDALAGAKAMGFGGVNLTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P K+ + D PLA AI AVNTI + + GYNTD + A+E+
Sbjct: 64 PLKQEALSIAD-ADPLAAAIGAVNTIDFKEG---MKGYNTDGLGAKRALEEE-------- 111
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGAA 350
G + G ++AGAGGA RA+AF GA V I + E+A LA+DV +G
Sbjct: 112 -----GVDIRGSEVLIAGAGGAARAIAFQFARDGASVTIANRTPEKALELAADVSPVGKV 166
Query: 351 RP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
R FE++ E L N T LGMHP+T+R + E + VFD VY P +TRLL
Sbjct: 167 RGCGFENLRALIGESDT-LVNCTVLGMHPDTERTIATSEDMHPDLTVFDIVYNPLETRLL 225
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
K+A AGA V+GV M + Q F ++TG E P + M+ VL
Sbjct: 226 KEARLAGAKRVNGVMMLVYQGAEAFRIWTGVEPPVDIMKRAVL 268
>gi|319934857|ref|ZP_08009302.1| hypothetical protein HMPREF9488_00133 [Coprobacillus sp. 29_1]
gi|319810234|gb|EFW06596.1| hypothetical protein HMPREF9488_00133 [Coprobacillus sp. 29_1]
Length = 423
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 26/296 (8%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 222
K I T ++G+++ P+ HS P++HN F+ + + +Y+ V + L + ++ +
Sbjct: 142 KKNRITGYTGLYGIVANPIRHSFSPMMHNTAFQTLGIDDVYLAFEVAENQLSDYITSVKT 201
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
+ GF+V PYK +M + D++ A+ AVNT+ + +GKLIG+ +D + + A E
Sbjct: 202 LNIKGFNVSMPYKLKIMDYLDDLTTEAKLCQAVNTV--KNVNGKLIGHISDGKGFVMACE 259
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD-----IDF 336
ER + + + V+ GAGGA A+ +GA+ +V+++
Sbjct: 260 ----EREWH---------IQNQKIVVLGAGGAACAIIVEMALQGAKEIVVYNRSEKPFIK 306
Query: 337 ERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
E + L D+ + +D L + +L T +GM PN D+ + E L V
Sbjct: 307 ELNQKLNCDIHLKSLSNKDELKQDLKDAYLLVQTTNVGMSPNVDQCLIDESYLSHQLKVA 366
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
D +Y P +T+LLK AE G ++G M L Q F +TG++ P ++E+ +A
Sbjct: 367 DIIYKPAQTKLLKMAERLGLEYMNGEGMILYQGAVSFEFWTGQKMP---IKEVKIA 419
>gi|398890972|ref|ZP_10644441.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
gi|398187570|gb|EJM74907.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
Length = 271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 22/262 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + + +V V+D + + G +V PYK VM D + AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTVVMPHLDRIDESAQ 82
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNTI DG L GYNTD ++ A+++ + L+ + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEV--------------TELSDKRIAVIG 126
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 370
AGGA RA+ +G A V +F+ FER +LA D+ AR + F + I+ NA
Sbjct: 127 AGGAARAVVYGCLQEAAEVTVFNRSFERGAALAEDL--GARWGGSVEMFTAKTFDIVINA 184
Query: 371 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
T +G P+++ + + L + +V D + P +T LL A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVQTALLLQAKALGCSTVAGTRMLVHQA 241
Query: 430 IGQFNLFTGKEAPKEFMREIVL 451
Q L+TGK+AP + M + +L
Sbjct: 242 CRQIELYTGKDAPIDIMEQAML 263
>gi|373859362|ref|ZP_09602091.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372450861|gb|EHP24343.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 292
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 33/299 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 225
I+ TK+ GL++ P+GHS P +HN + R + N Y+ V + L + + +
Sbjct: 6 RIDGRTKLLGLLATPIGHSLSPAMHNMSLRKLGLNYAYMAFEVGNAQLADVVTGMRALNV 65
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ DE+ P AQ AVNT++ DGKLIG+ TD
Sbjct: 66 RGFNVSMPNKTKILPLLDELSPAAQFAGAVNTVVNE--DGKLIGHITDG----------- 112
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 341
GY G G + G+ L GAGGA A+A A G A + IF+ D F RA+
Sbjct: 113 --TGYMRGLKEAGIDVIGKKITLLGAGGAATAIAIQAALDGVAEISIFNRDDEFFARAEK 170
Query: 342 ----LASDVMG-----AARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-L 389
+ ++ G ED+ + E + IL NAT +GM P + + + L
Sbjct: 171 NVQIINEEIKGINCKATVYRLEDVETLKAEIASSDILTNATGVGMKPLEGESLIQDASWL 230
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
R +V D VY PRKT+LL AE G ++G+ M L Q F ++TG+E P E+++E
Sbjct: 231 RPELIVSDVVYIPRKTKLLAMAETVGCQTLNGLGMMLWQGAKAFEIWTGQEMPVEYVKE 289
>gi|410456866|ref|ZP_11310717.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
gi|409927248|gb|EKN64391.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
Length = 277
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
K++ ++ P+GHS P++ N F + Y+P V +DL + GF+V
Sbjct: 3 KLYAVLGDPIGHSMSPVMLNDLFSFYQIDAHYLPFQVKTEDLGDAVKGLRAIGVGGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++ F D V LA +I AVNT++ GKLIGYNTD G+
Sbjct: 63 IPHKSTIIPFLDVVDELALSIGAVNTVVN--DGGKLIGYNTDGP-------------GFL 107
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD----V 346
+ ++G+ ++ GAGGA R + F AK + + I + ERA +L +D +
Sbjct: 108 RSLNPYVPSVSGQRILVIGAGGAARGIYFAMAKEKPLVIDIANRTLERAVNLIADCPYDI 167
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A ++ E I+ T +GM P P++ + L +V D +Y P +T+
Sbjct: 168 SSKALSLQEASEIIGEYDLII-QTTMIGMSPRMADQPLNLDNLAKQSIVCDIIYNPLETQ 226
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL+DA + GA +GV+MF+ Q F +TG E MR VL +
Sbjct: 227 LLQDAASKGARTQTGVDMFVYQGALAFEKWTGIFPDVERMRNNVLLQL 274
>gi|397165245|ref|ZP_10488698.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
gi|396093352|gb|EJI90909.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
Length = 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIF---DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A GA + +F D FE+A +
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDDFFEKAVAF 167
Query: 343 ASDVMGAARPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSE-ETLRDYQ 393
A V + + +K IL N T +GM P D+ +S+ LR
Sbjct: 168 ARRVNENTDCVVTVTDLADQKAFAAALATADILTNGTKIGMKPLDDQSLISDISLLRPGL 227
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
LV + VY P T+LL+ A+ AG + G M L Q QF L+TGKE P E+++ ++
Sbjct: 228 LVTECVYNPHITKLLQQAQQAGCKTIDGYGMLLWQGAEQFKLWTGKEFPLEYVKHVM 284
>gi|323136819|ref|ZP_08071900.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322398136|gb|EFY00657.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 281
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 132/280 (47%), Gaps = 19/280 (6%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 234
G++ P+ HS+ P +HN +G+YVP+ ++ L+ + FAG ++ P+
Sbjct: 12 GVMGWPISHSRSPKIHNYWMSQYGIDGVYVPLAIEPGKLEAALRALPALCFAGCNLTIPH 71
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 294
KEA + F D + P A I AVN ++ DG+LIG N D I ++ +A + G
Sbjct: 72 KEAALNFLDRIEPAAARIGAVNCVVVG-QDGELIGRNYDGYGFIASLREAAPDWGAARAP 130
Query: 295 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARPF 353
V+ GAGG RA+ G GAR + +F+ ERAK+LA+D G R
Sbjct: 131 C-----------VVIGAGGGARAIVSGLIEAGAREIRLFNRTMERAKALAADFGGPVRAC 179
Query: 354 EDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+ GA +L N T GM + +S L LV D VY P +T LL +A
Sbjct: 180 AWQERHEALAGAGLLVNTTSQGMV-GQQPLDLSLAALPATALVADIVYAPLETPLLAEAR 238
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTG--KEAPKEFMREIV 450
GA V G+ M + QA F ++G EA E IV
Sbjct: 239 RMGATAVDGLGMLMHQARPAFRDWSGVMPEATPELRARIV 278
>gi|150005076|ref|YP_001299820.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|294778884|ref|ZP_06744300.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|319642584|ref|ZP_07997231.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345520174|ref|ZP_08799574.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423311983|ref|ZP_17289920.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
gi|149933500|gb|ABR40198.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|254836003|gb|EET16312.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294447193|gb|EFG15777.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|317385818|gb|EFV66750.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392689362|gb|EIY82640.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
Length = 246
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 28/268 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 232
K +GLI P+GHS N F N + YV + +K+ S ++PD G +V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGLNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A AI AVN I+R+ +LIGYN+D +IE ++
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTRLIGYNSDVIGFTQSIEPLLE---- 117
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
P + +L G GGA +A+A+G K G +++L +++
Sbjct: 118 ---------PQHKKALIL-GTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYD 161
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVVVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|402312231|ref|ZP_10831161.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
gi|400370892|gb|EJP23874.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
Length = 289
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 24/290 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 227
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
F+V PYK+ ++ ++ A+ I A+NT+I+ K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDERAKKIGAINTLIKTEKGYK--GYNTDIIGLGMSL------ 113
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDV 346
Y N + + G+ ++ GAGGA +A+ + A G + + + + + +AK L ++V
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELRAEV 166
Query: 347 ------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-QLVFDAV 399
+ + + +N + + T +GMHPN + + EE + D +
Sbjct: 167 GIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLI 226
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
YTP +T +K ++ G I ++G++M + Q + F ++ + K+ + ++
Sbjct: 227 YTPFETTFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|307705053|ref|ZP_07641936.1| shikimate dehydrogenase [Streptococcus mitis SK597]
gi|307621401|gb|EFO00455.1| shikimate dehydrogenase [Streptococcus mitis SK597]
Length = 284
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 347
SF + G+ L GAGGA +++ A G +++ +F + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQERIAESDLLVNATSVGMDGQSSPVPESI-VLSETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEDIWKSLTEKY 283
>gi|424812401|ref|ZP_18237641.1| shikimate 5-dehydrogenase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756623|gb|EGQ40206.1| shikimate 5-dehydrogenase [Candidatus Nanosalinarum sp. J07AB56]
Length = 245
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 23/257 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + Y+ + +D+++ + + +F G SV P+ + ++ D + +
Sbjct: 1 MHNAGYEAKELDYTYIAIGAEDIREVLGSVQNLEFKGLSVSMPFNQEIVSLLDNTNDDVE 60
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I A NT++ DG+ GYNTD +I A+++ S L + G
Sbjct: 61 TIGACNTVV--IEDGETTGYNTDWRGAINALKET--------------SELDVEKAEIIG 104
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA-ILAN 369
+GG RA+A+G K V I E+ K L D+ A E L Q E GA ++ N
Sbjct: 105 SGGVARAIAYGLKKEQIEVHISARSEEQRKELVQDLNLAG---EINLEGQGEAGAELVVN 161
Query: 370 ATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
ATP+ P + PV E + + + D V+T +T ++++AE G G M L QA
Sbjct: 162 ATPVAQQPGS---PVELEKHENGEWLLDVVFTELQTDIIQEAEGKGWNTTKGWRMLLHQA 218
Query: 430 IGQFNLFTGKEAPKEFM 446
+ QF L+TG+E P E M
Sbjct: 219 LKQFELYTGEEPPTEEM 235
>gi|347532892|ref|YP_004839655.1| shikimate 5-dehydrogenase [Roseburia hominis A2-183]
gi|345503040|gb|AEN97723.1| shikimate 5-dehydrogenase [Roseburia hominis A2-183]
Length = 289
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 225
I+ T + LI PVGHS P ++N +F + + +YV + V+++ + +
Sbjct: 4 RISGHTGLLALIGSPVGHSGSPAMYNYSFERLGLDYVYVAFDIKVEEVADAIAAMRTFKM 63
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V+K+ DE+ P AQ I AVNTI+ +G+L G+ TD E
Sbjct: 64 RGCNVTMPCKTEVVKYMDELSPAAQIIGAVNTIVN--DNGRLTGHITDGE---------- 111
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 341
G+ + + G + G+ +AG GGA A+ GAR + IF+I FER
Sbjct: 112 ---GFVHNLKNHGIDIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDAFFERTLK 168
Query: 342 LASDVMGAA-------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRD 391
A + A D E + I ANAT +GM P + V + + R
Sbjct: 169 TAEKIRAAVPSCVVNVYDIADTARMTAEIASSDIFANATIVGMKPMENESVVKDTSAFRP 228
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V DAVY P +TRLL++A+ AGA + G M L Q + F L+TGK+ P E ++E
Sbjct: 229 GLVVADAVYNPEETRLLREAKEAGATCIGGKGMLLWQGVAAFKLYTGKDMPVEEVKE 285
>gi|390453029|ref|ZP_10238557.1| shikimate 5-dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 22/285 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQVAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + R K
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV---------RSLKE 123
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 351
T+ L G + GAGGA R + + + V+I + ++A+ LA + +
Sbjct: 124 ETSV---ELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLAQEWTTESI 180
Query: 352 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
P + N + + +L N T +GM P +D +P+ + +V D +Y P +TRL
Sbjct: 181 PVKGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRL 240
Query: 408 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
L+++ E G I+ G+ MF+ Q F FTG + MR VL
Sbjct: 241 LRESREQRGCIVHGGLGMFVYQGAVAFEYFTGVVPAVDQMRAAVL 285
>gi|148243617|ref|YP_001228774.1| shikimate dehydrogenase [Synechococcus sp. RCC307]
gi|147851927|emb|CAK29421.1| Shikimate dehydrogenase [Synechococcus sp. RCC307]
Length = 298
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 27/283 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA T++ G+I +P+ HS P++HN + N Y+ V D L++ ++
Sbjct: 9 INASTELLGVIGQPIHHSLSPVMHNAAIAELGLNWRYLAFAVAPDRLQQAIEGLAAMGCR 68
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G SV P+KE V V +A+ + AVN +I G G NTD +T + ++
Sbjct: 69 GLSVTIPHKETVQPLLSSVDAVARELGAVNCLIPD-GQGGWRGTNTDWSGFLTPLSGRLQ 127
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
E G+ +L G+GG RA+ G +VV+ + + ++LA D
Sbjct: 128 E--------------GGQALIL-GSGGVVRAVLRSCCELGIEQVVLRGRNRSKLEALAED 172
Query: 346 VMGAARPF-----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQLVFD 397
V A P ++ L E+ ++ N TPLGM D+ P+S + L +V+D
Sbjct: 173 VRNWAPPLLLSSGDEPLEPLLERSNLVVNGTPLGMAEMRDQTPLSAQQLSLLPASAVVYD 232
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
VYTPR T LLK A G + G+EM ++Q L+TG E
Sbjct: 233 VVYTPRPTLLLKLAAQRGLSVFDGLEMLVQQGAAALKLWTGLE 275
>gi|339446050|ref|YP_004712054.1| hypothetical protein EGYY_26520 [Eggerthella sp. YY7918]
gi|338905802|dbj|BAK45653.1| hypothetical protein EGYY_26520 [Eggerthella sp. YY7918]
Length = 290
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 31/296 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T+ LI PV HS P +HN +F + + YV V ++L+ +
Sbjct: 7 ISGHTQTIALIGSPVEHSMSPAMHNASFEKLGLDYAYVVFDVQPENLEAVVKGMKAMGIP 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K ++ + DE+ A+ + AVNT++ + DGKL+G+NTD
Sbjct: 67 GFNVTMPLKTPILPYLDELSDAAKLMGAVNTVVLQ--DGKLVGHNTDG------------ 112
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFE----R 338
G+ G + G+ ++GAGGAG A+ A G + + I D +E R
Sbjct: 113 -AGFMRNLKENGVDVIGKKVTISGAGGAGSAIFTQAALDGVKEIDVYNIRDSFYEATERR 171
Query: 339 AKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 393
LA+ G A D+ L A+ NAT +GM P + + E+ L +
Sbjct: 172 IAELAAQT-GCAVTLHDLADKDDLRASVADSALFINATRVGMPPLENECTLDEDMLHEGL 230
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
+ D VY PR T+LL +A G V+G+ M L QA ++TG+E P +++ E+
Sbjct: 231 ALADTVYNPRTTKLLAMGQAHGNKTVNGLGMLLWQAAIGEKIWTGQEMPVDYIEEL 286
>gi|304382673|ref|ZP_07365167.1| shikimate dehydrogenase [Prevotella marshii DSM 16973]
gi|304336298|gb|EFM02540.1| shikimate dehydrogenase [Prevotella marshii DSM 16973]
Length = 248
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGF 232
+GLI P+GHS N F + N Y +++L + T+ D G +V
Sbjct: 4 YGLIGYPLGHSFSLDFFNEKFENEGINAQYENFEISSIENLPEIIDTHQ--DLCGLNVTS 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE VM + D + P A++I AVN + I + + L G+NTD +IE I ER +
Sbjct: 62 PYKEQVMSYLDAISPEARSIGAVNVVKVIHKGNKTILRGFNTDAIGFRKSIE-PILERFH 120
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
K ++ G GGA +A+A+G K+ G ID + +D G
Sbjct: 121 KKA-------------LILGTGGAAKAVAYGLKALG-------IDTQYVSR--TDRKGCI 158
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
R +E I E+ ++ N TP GM+P+T+ P + E + ++ L++D +Y P +T LK
Sbjct: 159 R-YEQITPETIEEYNVIVNCTPCGMYPHTEEYPKLPYEAMDNHTLLYDLIYNPDETLFLK 217
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+ G II +G+EM L QA + L+ KE
Sbjct: 218 KGKEQGTIIKNGLEMLLLQAFASWELWNEKE 248
>gi|385262165|ref|ZP_10040280.1| shikimate dehydrogenase [Streptococcus sp. SK643]
gi|385191906|gb|EIF39318.1| shikimate dehydrogenase [Streptococcus sp. SK643]
Length = 284
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ +L+ + G ++
Sbjct: 7 TRLVAVVANPIKHSISPFIHNSAFEATTTNGAYVAWEIEAAELEVTVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 347
SF + G+ L G GGA +++ A G +++ IF I E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGGGGAAKSILAQAILDGVSQISIFVRSISMEKTGTYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VPVS L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPVSI-VLPETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G ++G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YKPFETPFLKWARSQGNPAINGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|417941019|ref|ZP_12584306.1| shikimate dehydrogenase [Streptococcus oralis SK313]
gi|343388312|gb|EGV00898.1| shikimate dehydrogenase [Streptococcus oralis SK313]
Length = 284
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 55/307 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 349
SF ++ + + GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGASKSILVQAILDGVSQISVF---------VRSTSMEK 160
Query: 350 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEE 387
RP+ ED+ Q + +L NAT +GM + VP V E
Sbjct: 161 TRPYLDKLQEQTGFKVDLYALEDVSELQSRIAESDLLVNATSVGMDGKSSPVPESIVLPE 220
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
TL LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIW 276
Query: 448 EIVLAKF 454
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|239637593|ref|ZP_04678565.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
gi|239596811|gb|EEQ79336.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
Length = 271
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 22/282 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS P++HN F ++ Y V + ++D GF++ P
Sbjct: 5 FAVIGDPISHSLSPLMHNKNFESLDLKYTYEAVNISIEDFDHIKEIIEGKSLDGFNITIP 64
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + DE+ + ++ AVNT++ R DGK IGYNTD GY G
Sbjct: 65 HKERIIPYLDEIDHQSSSVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 109
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
+ L ++ GAGGA + +A K ++ + + +R +S DV +
Sbjct: 110 LRQVYNDLENAYILILGAGGASKGIANELNKFVQPKLTVANRTMKRFESWDLDVNQISL- 168
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
D ++ I+ N TP GM N D +P+ + L LV D VY P KT +L AE
Sbjct: 169 --DQAESHLDEFDIIINTTPAGMDNNQD-IPIDLKYLNPETLVSDIVYIPYKTPILIAAE 225
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
G I +G++MF+ Q F ++TG +A + M+ VL +
Sbjct: 226 KKGNPIYNGLDMFVYQGAESFKIWTGLQADIKTMKNSVLNEL 267
>gi|374710081|ref|ZP_09714515.1| shikimate 5-dehydrogenase [Sporolactobacillus inulinus CASD]
Length = 295
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 38/308 (12%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPD 224
++ IN T+++GL + P HS P++HN +FR N +Y+ DL ++ D
Sbjct: 2 IDTINGHTRLYGLFAHPAKHSLSPLMHNLSFRKRGINAVYLAFDMTGDLGDAVNSIRQFD 61
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G ++ P+K V+ F DE+ P A I AVNTI+ R DG LIG NTD
Sbjct: 62 MGGVNLSMPFKRTVIPFLDELTPTADLIGAVNTIMNR--DGHLIGANTDGT--------- 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKS--- 341
G+ A+ G + + GAGGAG ++ S+G + F+R +
Sbjct: 111 ----GFFAHLAANGYATNRKTATVLGAGGAGLSIIAAGASKGLSTIHV---FKRRNASFP 163
Query: 342 LASDVM---GAARPFEDILNFQPEKGAI---------LANATPLGMHPNTDRVPVSE--- 386
SD + AA P L+ ++ A+ L N+T +GM + ++PV+E
Sbjct: 164 AVSDQLRQIAAAYPTTIQLHDYNDEAALQRALSESDFLINSTNIGMGDDA-KLPVAEALI 222
Query: 387 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
+ L +V DA+Y PR+TR L A+ G I +G+ M + Q F +T +E P + +
Sbjct: 223 DCLSPSAVVCDAIYEPRQTRFLHAAKQHGCITFNGLGMLIYQGAQAFQRWTDQEMPIDDV 282
Query: 447 REIVLAKF 454
+ +L +
Sbjct: 283 EDALLKEL 290
>gi|294494923|ref|YP_003541416.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
gi|292665922|gb|ADE35771.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
Length = 268
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 140/280 (50%), Gaps = 20/280 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
KVFG++ P+ HS P +HN FR + + Y V LK + F G ++
Sbjct: 3 KVFGVLGDPIEHSLSPAMHNAAFRELEMDCEYHAFRVRHKYLKNAILGAQAMGFGGLNIT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++F + LA+ I AVNT+ +DG + G+NTD + A+ +A
Sbjct: 63 VPHKEKALEFTNP-DTLARRIGAVNTV--SFNDG-IRGHNTDGLGAEMALLEA------- 111
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G + VL GAGGA RA+AF +GA V I + E+A+ LA DV +
Sbjct: 112 ------GVGINASNVVLVGAGGAARAIAFHFAEKGAGVTIANRTPEKAEVLAEDVGCSHA 165
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
E++ + IL NAT GMHP+ D S + L VFD VY P +T+LL A
Sbjct: 166 GLENLKELL-QDSDILINATSAGMHPHIDSTIASRDILHPGLAVFDIVYNPLQTKLLHQA 224
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
E AGA + GV M + Q F ++TG++ P E MR VL
Sbjct: 225 ELAGAKPIGGVAMLVHQGAEAFRIWTGQKPPVEVMRNAVL 264
>gi|312135613|ref|YP_004002951.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
gi|311775664|gb|ADQ05151.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
Length = 283
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTY-SSPDFAGFSVGFP 233
LI K + HS P +HN + + +Y + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVVGFNITIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +++FCDEV + I A NT+ + +GKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKKNGKLLAYNTDW-------------IGFKRS 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 352
G + + ++ G+GGA +A +G G + V + + +E+ +S+ S
Sbjct: 111 LEDIGVDVKDKKILVLGSGGAAKACIYGLYRMGVKEVFVTNRTYEKTESIKS-------L 163
Query: 353 FEDILNFQPE--------KGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAV 399
FEDIL P K I+ N T +GM PN + P E +Y V+D +
Sbjct: 164 FEDILKIIPVEWLKKYDFKYDIIINTTSVGMFPNIENSPFDFE---NYVAGIPVFVYDII 220
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
Y P KT LK+AE G +G++M + QA+ ++ G
Sbjct: 221 YNPLKTTFLKEAEIRGIKTGNGLKMLVYQAVEAEKIWFG 259
>gi|224024792|ref|ZP_03643158.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
gi|224018019|gb|EEF76026.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
Length = 249
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGF 232
K FGLI P+GHS N F N + YV + ++ F ++ P+ AG +V
Sbjct: 2 KKFGLIGFPLGHSFSKNFFNEKFHSENIDAEYVNFEIPTIEDFPKVLAANPNLAGLNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+AI AVN I ++ KLIGYN+D +IE ++
Sbjct: 62 PYKEKVIPYLDELDKDAEAIGAVNVIKLVQTKGKRKLIGYNSDLLGFTQSIEPLLE---- 117
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
P + +L G GGA +A+ G + G + R++ A+ V
Sbjct: 118 ---------PFHKKALIL-GTGGASKAINHGLQQLGLETLFVS----RSRHDANTVT--- 160
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
+E++ + ++ N TP+GM+P D+ P + E L L++D +Y P T +K
Sbjct: 161 --YEELTPEIMAEYKVIVNCTPVGMYPQADKCPEIPYECLTPQHLLYDLLYNPDTTLFMK 218
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
GA++ +G+EM L QA G ++++
Sbjct: 219 KGSDQGAVVKNGLEMLLLQAFGSWDIWN 246
>gi|338814240|ref|ZP_08626271.1| shikimate 5-dehydrogenase [Acetonema longum DSM 6540]
gi|337273771|gb|EGO62377.1| shikimate 5-dehydrogenase [Acetonema longum DSM 6540]
Length = 291
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVG 231
+ +GL+ + + HS P +H FR +N YV P+ D L + + G +V
Sbjct: 2 RFYGLLGETLSHSLSPEIHGYLFRRLNIEAAYVLFPVAADKLAEAVNGLRLLGAGGVNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
PYK +++ DE+ A+ + AVNT++ R DG+ IGYNTD + G+
Sbjct: 62 IPYKISIVPLLDELSVEARMLGAVNTVLFR--DGRAIGYNTDYD-------------GFG 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G AG+ V+ G GGA R A+ + GA V L S
Sbjct: 107 LMLQQHGIAAAGKTAVVLGTGGAARTAAYWLRDHGAAAV----------KLVSRRPAGTE 156
Query: 352 PFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
PFE D L P +L NATP+G +P+T+ P+ + L + + D +Y P +TRL
Sbjct: 157 PFETLPYDRLKVLPPTD-LLVNATPVGTYPHTEETPLDRDLLSRFANLVDLIYNPPETRL 215
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
L++A G V+G+ M QA+ ++ G+ E + +
Sbjct: 216 LREARQQGIPAVNGLTMLAAQAVAAEEIWQGRSLAGELLEPL 257
>gi|257877328|ref|ZP_05656981.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257811494|gb|EEV40314.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 282
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 340
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDKKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 341 -----------SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL 389
LA ++ A + +L + + L NAT +GM P+++ L
Sbjct: 167 ETVARIKEYYPDLAIEIYDLAD--QALLAEKINEADCLVNATTVGMGEGNTATPIADTDL 224
Query: 390 RDYQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
L V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 225 LHADLTVADAIYNPPMTQLLKDASAKGCKTVGGKGMLIGQGKAAFKLFTGKELP 278
>gi|445059505|ref|YP_007384909.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
gi|443425562|gb|AGC90465.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
Length = 269
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 136/288 (47%), Gaps = 34/288 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
F +I P+ HS P++HN F ++ Y + VP +++ K GF++
Sbjct: 3 FAVIGDPISHSLSPLMHNKNFESLDLKFTYEAVNVP--IENFKHIREIIEEKHLDGFNIT 60
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ + DE+ + ++ AVNT++ R DGK IGYNTD GY
Sbjct: 61 IPHKERIIPYLDEIDAQSSSVGAVNTVLIR--DGKWIGYNTDG-------------IGYV 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDV---- 346
G + L ++ GAGGA + +A K ++ + + +R ++ +V
Sbjct: 106 TGLKQVYNDLENAYILILGAGGASKGIANELIKFVNTKLTVANRTMKRFETWDLEVNQIS 165
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ A D + I+ N TP GM N D +P+ + L LV D VY P KT
Sbjct: 166 LEQAESHLDEFD-------IIINTTPAGMDDNQD-IPIDLKYLNPETLVSDIVYIPYKTP 217
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L AE G I +G++MF+ Q F ++TG +A + M++ VL K
Sbjct: 218 ILIAAENKGNPIYNGLDMFVYQGAESFKIWTGLQADIKTMKKSVLNKL 265
>gi|260886325|ref|ZP_05897588.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|260864044|gb|EEX78544.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 230
TK +I P+GHS P + N R V + YV P+ + L+ + F GF+V
Sbjct: 21 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 80
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K A++ DEV A+AI AVNT++ G+L G+NTD E G+
Sbjct: 81 TIPHKSAILPLLDEVDEAARAIGAVNTVV--CEAGRLKGFNTDVE-------------GF 125
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDV--- 346
A+ G + G+ VL GAGGA RA +G GA V + + +A+SLA +
Sbjct: 126 LGALAARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 185
Query: 347 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPR 403
+ A E K A++ N TPLGM P T +P V + + + +D +YTP
Sbjct: 186 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 245
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA 441
KT+ L+ AE+ G ++G M + Q F L+TG+EA
Sbjct: 246 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTGREA 283
>gi|350269991|ref|YP_004881299.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348594833|dbj|BAK98793.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 20/291 (6%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I+ +TK+ LI P+ S + N + N Y D L +FA
Sbjct: 3 IDINTKMVTLIGTPLSQSFAARMQNAGYEAAGLNMFYFYTEADKEHLGDIVGGLRYMNFA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K ++++ DE+ PL + + A NT+++ P +GKLIGYNTD T +
Sbjct: 63 GFAVTKPNKVRILRYLDELDPLCRKMGASNTVVKTP-EGKLIGYNTDGIGFYTTL----- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASD 345
T G + +F G GGAGRA+ GAR + FE AKSLA+D
Sbjct: 117 -------TQDGGIEVDQSVFFCFGGGGAGRAMCSVLAYYGARKIYITDAFEPCAKSLAAD 169
Query: 346 VMGAARPFEDILNF----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
+ + P + +++ + ++ NA+ +GM + P+ E ++ Q FDA Y
Sbjct: 170 INESFAPVAEFVHYGDLSKLAACDVVLNASGIGMGATIGQSPMPPEYIQPSQFYFDACYN 229
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
P KTR L +AE G +++G+ M L Q Q L+TG++AP E MR +LA
Sbjct: 230 PDKTRFLLNAEEKGCRVLNGLGMSLHQGTAQIELWTGQKAPVEAMRRELLA 280
>gi|15618943|ref|NP_225229.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae CWL029]
gi|15836566|ref|NP_301090.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae J138]
gi|16751990|ref|NP_445356.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae AR39]
gi|161484681|ref|NP_877347.2| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae TW-183]
gi|9087140|sp|Q9Z6M4.1|ARODE_CHLPN RecName: Full=Shikimate biosynthesis protein AroDE; Includes:
RecName: Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; AltName: Full=Type I DHQase;
Includes: RecName: Full=Shikimate dehydrogenase
gi|4377368|gb|AAD19172.1| Shikimate 5-Dehyrogenase [Chlamydophila pneumoniae CWL029]
gi|7189731|gb|AAF38612.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pneumoniae AR39]
gi|8979408|dbj|BAA99242.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae J138]
Length = 477
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 37/418 (8%)
Query: 23 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 82
++ L+ L ++D ++ + L SH + I+S + D EDL + +
Sbjct: 69 IQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLILSYHTD----KNEDLDAIYN 123
Query: 83 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 142
M AT A+I K+V S + +E + P +G GL S++LSP + A+
Sbjct: 124 EMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLCMGTHGLPSRVLSPLISNAMN 183
Query: 143 YGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
Y + P + G P +E L +Y ++ + ++GLI PV S + HN ++
Sbjct: 184 YAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLS 242
Query: 201 YNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 258
N Y+ P+ + ++ FFS F+G SV P K A+ D + AQ ++NT+
Sbjct: 243 LNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTL 302
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
+ R + K++GYNTD E + +K++ + + + GAGGA +A+
Sbjct: 303 VFR--NQKILGYNTDGE----GVAKLLKQKNIS---------VNNKHIAIVGAGGAAKAI 347
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 378
A +GA + IF+ A +LA+ G A P + NF+ I+ N P
Sbjct: 348 AATLAMQGANLHIFNRTLSSAAALATCCKGKAYPLGSLENFK--TIDIIINCLP------ 399
Query: 379 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
P R +V D P + L+ A+ G++I+ G EMF+ QA+ QF L+
Sbjct: 400 ----PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQFALW 453
>gi|193215315|ref|YP_001996514.1| shikimate 5-dehydrogenase [Chloroherpeton thalassium ATCC 35110]
gi|193088792|gb|ACF14067.1| shikimate 5-dehydrogenase [Chloroherpeton thalassium ATCC 35110]
Length = 296
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 36/302 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVN---YNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 230
K+ G++ + +S P++HN H+ Y I+ + + + AGF+V
Sbjct: 5 KILGILGHKIDYSLSPLIHNTAAEHLGLDYYYTIFNIHSAESIPAAIEGMRALGIAGFNV 64
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+K+ D++ P A + AVNTI+ + DG LIGYNTD E G+
Sbjct: 65 TIPYKERVVKYLDQLAPSASVVQAVNTIVNQ--DGLLIGYNTDVE-------------GF 109
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDFERAKSLASDVMG 348
F + L + + G GGA RA K+ + + + + + + L D++
Sbjct: 110 AEPLLPFQAQLKHQSVAIFGNGGAARATVEALKNLFEPSSIHLIVRNMRKGEELKQDLVR 169
Query: 349 AARPFEDILNFQPEKGAI--------LANATPLGM-----HPNTDRVPV---SEETLRDY 392
+ + ++ E + + NATP+G P T P+ S D
Sbjct: 170 RSMYLKISVHETDEPATLELLKTCRLIVNATPIGTVYANAEPGTKSEPLLPGSSYIWNDQ 229
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
+ +D VY+P T L+DA+ GA ++SG++M + QA F L+TGK+ P + ++ V+
Sbjct: 230 HIAYDLVYSPPMTAFLEDAKNHGATVISGIDMLIGQAARAFQLWTGKDMPLDIVKAAVMK 289
Query: 453 KF 454
K
Sbjct: 290 KI 291
>gi|308182041|ref|YP_003926169.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308047532|gb|ADO00076.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 296
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L + +
Sbjct: 2 TERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNKKLPSAIESIRTL 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+ V+ D++ P A+ AVNTI+ DG L GY TD + +++D
Sbjct: 62 DMRGSNVSMPNKQKVLPLLDKLDPAAEMCGAVNTIVN--DDGILTGYTTDGIGFMKSLDD 119
Query: 284 -AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF--ERAK 340
I RG+K T + + V A G F ++D ER
Sbjct: 120 EGINIRGHK-MTLAGAGGAGTAIAVQAALDGVSEMSIFNLHDAEWENAKHNVDLINERTS 178
Query: 341 SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFD 397
A+ ED +F+ E I +AT +GM P D+ V + + LR +VFD
Sbjct: 179 CHAT-----LHELEDRDDFKKEIQDSYIYTDATGVGMKPLEDKTLVDDPSWLRKDLIVFD 233
Query: 398 AVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
VY PR T+L+K A+ AG + +G+ M L Q F L+TG++ P +++R I+
Sbjct: 234 TVYAPRTTKLMKVAQEAGVEHVFNGLGMMLEQGAAAFKLWTGEDMPVDYIRHIL 287
>gi|363900511|ref|ZP_09327016.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB1]
gi|395209196|ref|ZP_10398361.1| shikimate dehydrogenase [Oribacterium sp. ACB8]
gi|361956385|gb|EHL09703.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB1]
gi|394705797|gb|EJF13323.1| shikimate dehydrogenase [Oribacterium sp. ACB8]
Length = 289
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T+++GL+ PV HS P +HN FR ++ N Y+ V +DL+
Sbjct: 5 EIDGKTRLYGLLGNPVSHSLSPFIHNEGFRRLSLNARYLAFSVKEEDLENTLFALRKMGV 64
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ P KEAV+ CD + A+ ++VNT++ +GK+ G +TD A+E
Sbjct: 65 GGLNLTMPLKEAVLSLCDSLSKEARLSSSVNTLVF-SENGKMTGCSTDGIGFFRALEA-- 121
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLAS 344
+NG + G+ L G GGAG+A+ SR I +I +RA S+
Sbjct: 122 -----ENGVVN------GKKLCLMGLGGAGKAIL----SRAVYTEISEIRLLQRASSIEK 166
Query: 345 D---------------VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL 389
+ ++G+ +E+ L PE+ IL N+T +GM +P + L
Sbjct: 167 NRAFIEKVERETGKQILLGS---YEENLAEFPEESDILVNSTNVGMGAEASLIP-EVKLL 222
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T+LL A AG ++G+ M QA F L+TGK+ P+E
Sbjct: 223 HKGLFVADCIYHPFETKLLSQAREAGLRYMNGLPMLFYQAAEAFRLWTGKDYPEE 277
>gi|308172646|ref|YP_003919351.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|384163203|ref|YP_005544582.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|307605510|emb|CBI41881.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|328910758|gb|AEB62354.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
Length = 303
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G LIG++TD
Sbjct: 76 RGFNVSMPNKMKILPYLDELADSAKFTGAVNTVVNE--NGTLIGHSTDG----------- 122
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 342 ----LASDVMGAAR-----PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G++ P ED L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKANIFPLEDQDALRAEIATSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+ AG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQEAGCKTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|398868804|ref|ZP_10624196.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
gi|398232420|gb|EJN18385.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
Length = 271
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 22/265 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + + +V V+D + + G +V PYK AVM + D+V A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPYLDKVDESAR 82
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNTI DG L GYNTD ++ A+++ + R + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTELRDKR--------------IAVIG 126
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 370
AGGA RA+ +G V +F+ ER +LA D+ AR I F + I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAGEVTVFNRSIERGTALAEDL--GARWGGSIEAFTAKSFDIVINA 184
Query: 371 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
T +G P+++ + + L + +V D + P T LL A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVHTALLLQAKALGCSTVAGTRMLVHQA 241
Query: 430 IGQFNLFTGKEAPKEFMREIVLAKF 454
Q L+TGKEAP + M + +L +
Sbjct: 242 CRQIELYTGKEAPIDIMEQAMLQEI 266
>gi|384158319|ref|YP_005540392.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384167370|ref|YP_005548748.1| shikimate dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328552407|gb|AEB22899.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|341826649|gb|AEK87900.1| putative shikimate dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 294
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
GF+V P K ++ + DE+ A+ AVNT++ +G LIG++TD
Sbjct: 67 RGFNVSMPNKMKILPYLDELADSAKFTGAVNTVVNE--NGTLIGHSTDG----------- 113
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 341
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 342 ----LASDVMGAAR-----PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 388
+ ++ G++ P ED L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKANIFPLEDQDALRAEIATSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
LR +V D VY P ++LL+ A+ AG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQEAGCKTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|322371081|ref|ZP_08045633.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
gi|320549071|gb|EFW90733.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
Length = 267
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
V+GL+ PVGHS P +H + ++ + YV + + ++ +G +V P
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEVAYDELDMDARYVTFEPEAIGPAIEGANALGISGLNVTIP 61
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLIGYNTDCEASITAIE-DAIKERGYK 291
+KE + E LA+ I AVNT+ P D G+NTD E + A E + G
Sbjct: 62 FKEDALSHV-EPDSLAEHIGAVNTVDFSAPDDSVPTGHNTDAEGARRAFERHGVSRDGAS 120
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G F+LA GA V I + RA+SLA+DV GA+
Sbjct: 121 AVVVGAGGAARAIAFMLA--------------DDGATVEIANRTVSRAESLAADVDGASA 166
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
D L +L NAT +GM +D PV L V DAVY+P TRLL++A
Sbjct: 167 HGLDELPGLVSGADVLVNATSVGM--ESDESPVPATALHGDLAVMDAVYSPLDTRLLREA 224
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
A GA + G M L Q + F L+TGK+AP E M
Sbjct: 225 SARGATTIDGAWMLLFQGVAAFELWTGKDAPVERM 259
>gi|282891758|ref|ZP_06300239.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498342|gb|EFB40680.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 674
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 195/434 (44%), Gaps = 30/434 (6%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R + GG + E R+E ++ L Y+D E + +++ + SS + I+S +
Sbjct: 59 RSQAQGGNFNQSEESRVEHIYRLAALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYH 117
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
ETP E+ +L + MQ A K+ + + R+ + +I S+G
Sbjct: 118 NLQETP--ENFDHLYTDMQKIPAHFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPN 175
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
G + ++L P N + SL P LG + + L + Y+ + + T ++GLI PV
Sbjct: 176 GQIGRILGPIVNHPFTFASLDEDPKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVN 235
Query: 185 HSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 242
S HN + +YV P+ +L F + G SV P K+++M F
Sbjct: 236 LSISDETHNAVLAACGMDAVYVKIPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFI 295
Query: 243 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 302
D + A+ I AVNT+ + + ++ G+NTD ++ A+E K G +
Sbjct: 296 DHLDVKAEKIGAVNTL--QFKEDQIYGFNTDGMGAMEALET-------KCG-------IQ 339
Query: 303 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 362
G+ V+ GAGGA RA+A+ A + A V + + E+A +A + ++
Sbjct: 340 GKHVVIIGAGGAARAIAYEAVQKKALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQV 399
Query: 363 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 422
IL N T + M P++ E + + V D P+ + L++A G ++ G
Sbjct: 400 GYDILINCTSVPM-------PIAFEDILPHVFVMDIKTKPKVSLFLENALKKGCQVIFGY 452
Query: 423 EMFLRQAIGQFNLF 436
+MF+ QA+GQF L+
Sbjct: 453 QMFIAQALGQFKLW 466
>gi|283833360|ref|ZP_06353101.1| shikimate dehydrogenase [Citrobacter youngae ATCC 29220]
gi|291071004|gb|EFE09113.1| shikimate dehydrogenase [Citrobacter youngae ATCC 29220]
Length = 288
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A G + + D FE+A++
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRKDEFFEKAQAF 167
Query: 343 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
A V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFADAL----ATADILTNGTKVGMKPLDNESLVTDVSLL 223
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R LV + VY P T+LL+ A+ AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQLAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 450 V 450
+
Sbjct: 284 M 284
>gi|384449779|ref|YP_005662381.1| shikimate dehydrogenase [Chlamydophila pneumoniae LPCoLN]
gi|269302837|gb|ACZ32937.1| shikimate dehydrogenase family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 477
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 37/418 (8%)
Query: 23 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 82
++ L+ L ++D ++ + L SH + I+S + D EDL + +
Sbjct: 69 IQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLILSYHTD----KNEDLDAIYN 123
Query: 83 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 142
M AT A+I K+V S + +E + P +G GL S++LSP + A+
Sbjct: 124 EMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLCMGTHGLPSRVLSPLISNAMN 183
Query: 143 YGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
Y + P + G P +E L +Y ++ + ++GLI PV S + HN ++
Sbjct: 184 YAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLS 242
Query: 201 YNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 258
N Y+ P+ + ++ FFS F+G SV P K A+ D + AQ ++NT+
Sbjct: 243 LNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTL 302
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
+ R + K++GYNTD E + +K++ + + + GAGGA +A+
Sbjct: 303 VFR--NQKILGYNTDGE----GVAKLLKQKNIS---------VNNKHIAIVGAGGAAKAI 347
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 378
A +GA + IF+ A +LA+ G A P + NF+ I+ N P
Sbjct: 348 AATLAMQGATLHIFNRTLSSAAALATCCKGKAYPLGSLENFK--TIDIIINCLP------ 399
Query: 379 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
P R +V D P + L+ A+ G++I+ G EMF+ QA+ QF L+
Sbjct: 400 ----PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQFALW 453
>gi|150019383|ref|YP_001311637.1| shikimate 5-dehydrogenase [Clostridium beijerinckii NCIMB 8052]
gi|189046309|sp|A6M251.1|AROE_CLOB8 RecName: Full=Shikimate dehydrogenase
gi|149905848|gb|ABR36681.1| shikimate 5-dehydrogenase [Clostridium beijerinckii NCIMB 8052]
Length = 270
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 24/259 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 233
+GLI + + HS P +HN F+ + G Y V+ +L K + G +V P
Sbjct: 4 YGLIGEKLSHSLSPKIHNTLFKDLKIEGAYKLFEVEKENLGKLIESIKLLKIKGVNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YK+ VM++ D + A+ I AVNTI D KL GYNTD Y G
Sbjct: 64 YKQDVMEYLDFISDEAKKIGAVNTIYLE--DNKLYGYNTDY---------------YGFG 106
Query: 294 TASFGSPLAGR--MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
T + + R + ++ G GGA +A+ G + + + S D +
Sbjct: 107 TILNNNEIVIRDNVAMVLGNGGAAKAVITYLLDHGIKKIYLVSRKIKGNSADKDERIEFK 166
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
+E+I KG IL N TPLGM+P D PV+E+ + ++ + D +Y PR+TR LK
Sbjct: 167 TYEEISEI---KGDILINTTPLGMYPKVDDTPVNEDIINNFNSLIDIIYNPRETRFLKIG 223
Query: 412 EAAGAIIVSGVEMFLRQAI 430
+ + + G+EM + QAI
Sbjct: 224 KNSNKKVCGGIEMLVGQAI 242
>gi|417848344|ref|ZP_12494290.1| shikimate dehydrogenase [Streptococcus mitis SK1073]
gi|339452870|gb|EGP65491.1| shikimate dehydrogenase [Streptococcus mitis SK1073]
Length = 284
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS-DVMG 348
SF + G+ L GAGGA +++ A G +++ +F R K+ D +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSISREKTRPYLDKLQ 169
Query: 349 AARPF-------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
F ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPESI-VLPETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPAEEIWKSLTEKY 283
>gi|330839701|ref|YP_004414281.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|329747465|gb|AEC00822.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 296
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 230
TK +I P+GHS P + N R V + YV P+ + L+ + F GF+V
Sbjct: 6 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 65
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K A++ DEV A+AI AVNT++ G+L G+NTD E G+
Sbjct: 66 TIPHKSAILPLLDEVDEAARAIGAVNTVV--CEAGRLKGFNTDVE-------------GF 110
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDV--- 346
A+ G + G+ VL GAGGA RA +G GA V + + +A+SLA +
Sbjct: 111 LGALAARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 170
Query: 347 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPR 403
+ A E K A++ N TPLGM P T +P V + + + +D +YTP
Sbjct: 171 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 230
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA 441
KT+ L+ AE+ G ++G M + Q F L+TG+EA
Sbjct: 231 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTGREA 268
>gi|148655701|ref|YP_001275906.1| shikimate 5-dehydrogenase [Roseiflexus sp. RS-1]
gi|148567811|gb|ABQ89956.1| shikimate dehydrogenase [Roseiflexus sp. RS-1]
Length = 283
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 136/282 (48%), Gaps = 29/282 (10%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 234
G+I PV HS P LHN F H+ Y +L + ++ +P G +V P+
Sbjct: 7 GVIGDPVDHSLSPFLHNAAFEHLGIVARYERWRTSSAELPQRIASLRAPHILGANVTLPH 66
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKNG 293
K AV+ D + P A+ I AVNTI+R P DG+L G NTD A+I + EDA G+
Sbjct: 67 KIAVIPLLDRLDPQAEQIGAVNTIVRLP-DGQLEGCNTDAPATIATLREDA----GFD-- 119
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA--AR 351
P R+ +L +G A A ++ + + + ERA+ L +DV+ A
Sbjct: 120 ------PTGKRIVLLGASGAARAAACALIAAQATALTVINRTLERAEELLADVLANSDAD 173
Query: 352 PFEDILNFQ----PEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
P+ L PE A ++ NAT LG H D P+ + LVFD VY P
Sbjct: 174 PYLRALTPDDPDVPEAIASADLIINATSLGWH--ADETPLPGHLIPATALVFDMVYRP-- 229
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
TRLL++A AGA + G M +RQA F +TG AP + M
Sbjct: 230 TRLLREAAQAGAATLDGRGMLVRQAALSFERWTGVSAPLDVM 271
>gi|33236917|gb|AAP99004.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae TW-183]
Length = 503
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 37/418 (8%)
Query: 23 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 82
++ L+ L ++D ++ + L SH + I+S + D EDL + +
Sbjct: 95 IQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLILSYHTD----KNEDLDAIYN 149
Query: 83 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 142
M AT A+I K+V S + +E + P +G GL S++LSP + A+
Sbjct: 150 EMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLCMGTHGLPSRVLSPLISNAMN 209
Query: 143 YGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 200
Y + P + G P +E L +Y ++ + ++GLI PV S + HN ++
Sbjct: 210 YAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIGDPVDRSISHLSHNFLLSKLS 268
Query: 201 YNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 258
N Y+ P+ + ++ FFS F+G SV P K A+ D + AQ ++NT+
Sbjct: 269 LNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAIFDHVDALDASAQLCESINTL 328
Query: 259 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 318
+ R + K++GYNTD E + +K++ + + + GAGGA +A+
Sbjct: 329 VFR--NQKILGYNTDGE----GVAKLLKQKNIS---------VNNKHIAIVGAGGAAKAI 373
Query: 319 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 378
A +GA + IF+ A +LA+ G A P + NF+ I+ N P
Sbjct: 374 AATLAMQGANLHIFNRTLSSAAALATCCKGKAYPLGSLENFK--TIDIIINCLP------ 425
Query: 379 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
P R +V D P + L+ A+ G++I+ G EMF+ QA+ QF L+
Sbjct: 426 ----PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGSLIIHGYEMFIEQALLQFALW 479
>gi|292670694|ref|ZP_06604120.1| shikimate dehydrogenase [Selenomonas noxia ATCC 43541]
gi|292647640|gb|EFF65612.1| shikimate dehydrogenase [Selenomonas noxia ATCC 43541]
Length = 287
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD--FA 226
I TKV +I P+ HS PI+ N + + +Y + V + Y D
Sbjct: 3 ITGKTKVLAVIGAPIAHSLSPIIQNAALQAAGIDCVYAALPVRPGALSSAVYGLRDAGVV 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +M+ D + AQ I AVNT++ + +DG L+G+NTD
Sbjct: 63 GFNVTIPFKTEIMELMDALSEDAQRIRAVNTVVVQ-TDGTLMGHNTDVV----------- 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLA-- 343
G+ G A G AG+ V+ GAGGA RA+ +G G V + + + +L
Sbjct: 111 --GFLAGFAEHGVVPAGKRAVVLGAGGAARAVLWGLLRSGISSVCVGVRNGAKGAALCEE 168
Query: 344 ----SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
DV A D L I+ TP+GM P+ D +P V + +V+D
Sbjct: 169 FAADGDVRSAVFDNPDFLACIGSAD-IVVQTTPMGMTPHIDAMPPVDVAAINSSAVVYDL 227
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+YTP KTRLL++AEA G ++G M Q F L+T MR ++
Sbjct: 228 IYTPAKTRLLREAEARGHETINGEMMLAAQGAEAFFLWTNVRPDMALMRRVL 279
>gi|448350577|ref|ZP_21539389.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
gi|445636146|gb|ELY89309.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
Length = 271
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 137/286 (47%), Gaps = 21/286 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS P +H + + ++ YV D+L ++ G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGFDARYVTFEPDSDELAAAIDGAAALGITGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K+ + E LA I AVNTI S + GYNTD ++ A+ + E
Sbjct: 62 IPFKQDALDLV-EPDDLAARIGAVNTIDFADASTEQPTGYNTDAAGALRALRE--HEVTI 118
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+N TA AGGAGRA++F GA V I + A LA+DV GA
Sbjct: 119 ENATAVVVG-----------AGGAGRAISFALSDAGADVAIANRTESTAHDLAADVPGAT 167
Query: 351 --RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 408
+D L+ + +L NAT +GM N PV + L +V DAVY P +TRLL
Sbjct: 168 GHDLADDTLDSLLTQANVLVNATSVGMEDNA--TPVPADALHAELVVMDAVYRPLETRLL 225
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+DA A GA V G M L Q + F L+T ++AP + M E + ++
Sbjct: 226 RDAAAIGAQTVDGAWMLLYQGVEAFELWTDRDAPVDEMNEALRSRL 271
>gi|282859528|ref|ZP_06268633.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|424900957|ref|ZP_18324499.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
gi|282587756|gb|EFB92956.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|388593157|gb|EIM33396.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
Length = 249
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGF 232
+GLI P+GHS N F++ N Y+ ++DL + + +P+ G +V
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFQNEGINAKYINFEIPSIEDLTEILAL--NPELKGLNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE ++ + DE+ P A+AI AVN I R+ L G+N+D +IE + +
Sbjct: 62 PYKEQIIPYLDEISPEAKAIGAVNVIRITRKGHKTILKGFNSDVIGFTQSIEPLLMPHWH 121
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
K ++ G GGA +A+ +G KS G D K + ++
Sbjct: 122 KKA-------------LVLGTGGAAKAINYGLKSLG-----LDTKLVSRKPMLEEISYEK 163
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
E I ++ ++ N TPLGM+PN + P + E + +++D +Y P +T +K
Sbjct: 164 ITPEIIKDYN-----VIVNCTPLGMYPNVETCPKLPYEAMNTKTILYDLIYNPDQTLFMK 218
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
A GA + +G+EM L QA + + GKE
Sbjct: 219 KGAAQGATVKNGLEMLLLQAFASWEFWHGKE 249
>gi|397906480|ref|ZP_10507280.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
gi|397160437|emb|CCJ34617.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
Length = 271
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 22/280 (7%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+++GL+ K +G+S PI+HN + +N NG+Y V D L F + G +V
Sbjct: 2 NEIYGLLGKKLGYSFSPIIHNIILKELNINGLYCLFEVEEDKLNLAFEGFKILKIKGINV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYK ++ DE+ A+ I ++NTI + +G IGYNTD G+
Sbjct: 62 TIPYKIKTIELVDELSLEAKNIGSINTI--KFMEGYSIGYNTDY-------------FGF 106
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ + + ++ + G GGA RA+ K ++ +I R K D+
Sbjct: 107 IRSLSKYNIDVKNKIVYVLGTGGASRAVIQALKDLNSKKII---AVTRNKKNKKDLDVEL 163
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
+ ++ + KG IL N TPLGM+P+ D +P+ + + ++ +V+D +Y P++T L+K
Sbjct: 164 IDYYEL--SKKGKGDILINCTPLGMNPDLDILPIERDIIANFSIVYDLIYNPKETILMKW 221
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
A+ +G+ M + QAI ++ G + +I+
Sbjct: 222 AKQFNIPSYNGMAMLVYQAIKAQEVWNGTNLDIKLTDKII 261
>gi|210610027|ref|ZP_03288206.1| hypothetical protein CLONEX_00392 [Clostridium nexile DSM 1787]
gi|210152638|gb|EEA83644.1| hypothetical protein CLONEX_00392 [Clostridium nexile DSM 1787]
Length = 291
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 30/303 (9%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E I T++ GL++ P+ HS P + N F + Y+ Y+ VD+ L+ +
Sbjct: 3 ERITGHTELIGLMAYPIRHSSSPAMQNEAFAKLGYDYAYLAFEVDNDTLEDAIKGLRALK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ DE+ P A+ AVNTI+ +G L G+ TD + A++D
Sbjct: 63 MRGSNVSMPNKTVVHKYLDELSPAAKMCGAVNTIVN--DNGHLTGHITDGIGYMAALKDN 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID-------F 336
+ G+ + GAGGA A+ A G A + IF+I
Sbjct: 121 -------------NIDVIGKKMTIVGAGGAATAIEIQAALDGVAEMSIFNIKDKFWANAE 167
Query: 337 ERAKSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 391
E K + + A ++ D L + + AN T +GM P + + +++ LR
Sbjct: 168 ETVKKINENTNCKATLYDLADLDKLKEEIADSYLFANGTGMGMKPLEGQTYIPDKSFLRP 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY PR+T LLK A+ G ++G+ M L Q F L+TG+ P E+M+EI+
Sbjct: 228 DLIVTDVVYAPRETALLKMAKEVGCKTMNGLGMMLFQGSAAFELWTGEPMPIEYMKEILD 287
Query: 452 AKF 454
K+
Sbjct: 288 IKY 290
>gi|62185307|ref|YP_220092.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila abortus S26/3]
gi|424825347|ref|ZP_18250334.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
gi|62148374|emb|CAH64141.1| shikimate 5-dehydrogenase [Chlamydophila abortus S26/3]
gi|333410446|gb|EGK69433.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
Length = 477
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 174/416 (41%), Gaps = 38/416 (9%)
Query: 25 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRM 84
L LAE L +Y+D + L K ++ + L + + E + L M
Sbjct: 72 TLQLAE-LQPEYLDIDKDFPKEALAKIQKNYPK-----IKIILSYHSETSEHIPNLCKEM 125
Query: 85 QATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYG 144
A K+ + T+ R Q+ H +G G+ S++LSP A+ Y
Sbjct: 126 LRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYA 185
Query: 145 SLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 202
S P + G ++E L Y +++A+ +++GLI PV S + HN F + N
Sbjct: 186 SGIHAPKVAPGQLSIEDLL-AYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSELQLN 244
Query: 203 GIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
Y+ + + +L +FFS F G SV P+K AV+++ D + P Q + NT++
Sbjct: 245 MSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVF 304
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 320
+ K+ GYNTD G N PL + G+GGA +A+A
Sbjct: 305 H--NNKIAGYNTD-------------GLGLLNLLKRKNIPLQNMHVGIVGSGGAAKAIAT 349
Query: 321 GAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD 380
GA++ IF+ A+ L+ G A P + + IL P G+
Sbjct: 350 TFAYSGAQISIFNRTKAHAEKLSVLCHGQAFPLHSL--SEHHNIDILILCLPPGVDIPEI 407
Query: 381 RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
PV + D P+++ K A+ G I+ G EMF QA+ QF+L+
Sbjct: 408 YPPV----------IIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|289550633|ref|YP_003471537.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis HKU09-01]
gi|385784261|ref|YP_005760434.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|418413937|ref|ZP_12987153.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180165|gb|ADC87410.1| Shikimate 5-dehydrogenase I alpha, AroDI alpha [Staphylococcus
lugdunensis HKU09-01]
gi|339894517|emb|CCB53798.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|410877575|gb|EKS25467.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 271
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 132/285 (46%), Gaps = 28/285 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
F +I P+ HS P++HN F+ +N Y I+VP + + + GF+V
Sbjct: 3 FAVIGDPISHSLSPLMHNANFKALNMRHTYEAIHVPR--EHFHHIKDIIAEKEIDGFNVT 60
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ + D + A+ I AVNTI + GK IGYNTD GY
Sbjct: 61 IPHKEAIIPYLDVIDDTAKNIGAVNTIAIK--QGKWIGYNTDG-------------IGYV 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
G + ++ GAGGA + +A K ++ I + +R S DV +
Sbjct: 106 TGLKHIYPDIEHAYILILGAGGASKGIAHELIKYVEPKITIANRTAKRFDSWTLDVNKIS 165
Query: 351 -RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
E LN + I+ N TP+GM + V VS L LV D VY P KT L
Sbjct: 166 LETAERHLN----QFDIIINTTPVGMSQSKASV-VSLSNLSPQTLVSDIVYIPAKTPFLD 220
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AE G I +G++MF+ Q FN++TG+ A M++ V+ K
Sbjct: 221 QAEQNGNPIYNGLDMFILQGAASFNIWTGQTANINTMKQTVINKL 265
>gi|398849576|ref|ZP_10606310.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
gi|398250644|gb|EJN35952.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
Length = 271
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 22/265 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + + +V V+D + + G +V PYK AVM D++ AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMSCLDKIDESAQ 82
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNTI +G L GYNTD ++ A+++ + L+G+ + G
Sbjct: 83 VIGAVNTI--NNVEGVLTGYNTDYLGAVRALQEV--------------TELSGKRIAVIG 126
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 370
AGGA RA+ +G A V +F+ ER +LA D+ AR ++ F I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAAEVTVFNRSIERGAALAEDL--GARWGGNVGAFAATSFDIVINA 184
Query: 371 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
T +G P ++ + + L + +V D + P +T LL A+ G V+G M + QA
Sbjct: 185 TSVGFKQPESNPL---DGVLASHLIVMDVAFMPVQTALLLQAKTLGCRTVAGTRMLVHQA 241
Query: 430 IGQFNLFTGKEAPKEFMREIVLAKF 454
Q L+TG++AP + M + +L +
Sbjct: 242 CRQIELYTGRDAPIDIMEQAMLKEI 266
>gi|323702295|ref|ZP_08113961.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333924359|ref|YP_004497939.1| shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532785|gb|EGB22658.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333749920|gb|AEF95027.1| Shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 293
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 17/292 (5%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
IN +TKV GL PV HS P +HN ++ ++ N YVP V L + + A
Sbjct: 6 INGNTKVCGLFGWPVEHSFSPAMHNAAYQRLSLNYTYVPFNVHPASLPQAVQAVRALGLA 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K+AV+ D++ AQ I AVNTI+ DGKL+GYNTD + ++ + +
Sbjct: 66 GVNVTVPHKQAVLPLLDQIDAAAQMIGAVNTIVN--VDGKLVGYNTDGSGFVKSLIEGAR 123
Query: 287 ERGYKNGTA---SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 343
KN TA G LA +G AG + +R A + S
Sbjct: 124 -FAPKNKTALILGAGGAARAVAVQLALSGLAGLYITNRTPARAA-------ELAEHVSRT 175
Query: 344 SDVMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAVYT 401
+ V A P+ D+ + ++ T +GM P+ D+ P T L QLV D +Y
Sbjct: 176 TGVQAVALPWGHDLPADIVMEVDLVVQTTSMGMSPHIDQCPDFPLTALHAGQLVCDLIYN 235
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
P +T L+ A A GA ++G+ M L Q + F L+TG+ AP + MRE +L +
Sbjct: 236 PDQTAFLRGAAARGAATLNGLGMLLYQGVLAFELWTGQTAPVDVMREALLKQ 287
>gi|357042456|ref|ZP_09104161.1| hypothetical protein HMPREF9138_00633 [Prevotella histicola F0411]
gi|355369408|gb|EHG16803.1| hypothetical protein HMPREF9138_00633 [Prevotella histicola F0411]
Length = 250
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 128/273 (46%), Gaps = 36/273 (13%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + + N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSVGYFNEKFSNEHINAKYINFEIPSIEDFAEVIESNPELRGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
KE V+ + D + P A AI AVN I R+ L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEANAIGAVNVIRITRKGDKTHLKGFNSDVIGFTRSIEPLL-ERHHKK 122
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
++ G GGA +A+ +G +S G V RP
Sbjct: 123 A-------------LILGTGGASKAVDYGLRSLGIETKF--------------VSRTKRP 155
Query: 353 ----FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRL 407
+E+I + I+ N TPLGM+PNTD P + E + + L++D +Y P +T
Sbjct: 156 GFFTYEEITPEIIKDYNIIVNCTPLGMYPNTDVCPTLPYEAMDSHNLLYDLLYNPDETLF 215
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
++ + GAI +G+EM L QA + + GKE
Sbjct: 216 MQKGKEHGAITKNGLEMLLLQAFASWEFWNGKE 248
>gi|325568698|ref|ZP_08144991.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325157736|gb|EGC69892.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 282
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 32/292 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 340
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDQKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 341 SLASD--------VMGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSE-ETLR 390
V+ + L + KGA L NAT +GM P+++ E L
Sbjct: 167 ETVVRIKEYYPDLVIDIYDLTDQALLAEKIKGADCLVNATTVGMGEGNTATPIADTEVLH 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 227 ADLTVADAIYNPPMTQLLKDASAKGCKTVGGKRMLVGQGKAAFKLFTGKELP 278
>gi|420263650|ref|ZP_14766286.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769092|gb|EJF48955.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 282
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 139/292 (47%), Gaps = 32/292 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 340
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDQKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 341 SLASD--------VMGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSE-ETLR 390
+ V+ + L + KGA L NAT +GM P+++ E L
Sbjct: 167 ETVARIKEYYPDLVIDIYDLTDQALLAEKIKGADCLVNATTVGMGEGNTATPIADTEVLH 226
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 227 ADLTVADAIYNPPMTQLLKDASAKGCKTVGGKGMLVGQGKAAFKLFTGKELP 278
>gi|307708917|ref|ZP_07645377.1| shikimate dehydrogenase [Streptococcus mitis SK564]
gi|307620253|gb|EFN99369.1| shikimate dehydrogenase [Streptococcus mitis SK564]
Length = 284
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 136/295 (46%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELRDEARLIGAVNTVVN--DNGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF + G+ L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKADLYALEDVSELQERIAESDLLVNATSVGMDGQSSPVPESI-NLPETILVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|438003027|ref|YP_007272770.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|432179821|emb|CCP26794.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 287
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 24/280 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDCT----------- 113
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G+ + L R+F+ GAGG G+A+A +G ++ + + ++A++L
Sbjct: 114 --GFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVKKLFLTNRSIDKAENLRKR 170
Query: 346 VMGAARPFEDILNFQP---EKGAILANATPLGMHPNTDRVPV--SEETLRDYQLVFDAVY 400
+ ++ +I+ + E+ + L + N P + E +R L+++ +Y
Sbjct: 171 LEHLSKTEVEIIPWDKKVMERRHKRISHYKLYISRNVQWKPCYSAVELVRSNTLIYETIY 230
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
PR+T L+ A + ++ G+ + + QA + ++TG E
Sbjct: 231 EPRETTLISKARSLNLEVIEGINLLVYQAAAAYKIWTGLE 270
>gi|289522730|ref|ZP_06439584.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504566|gb|EFD25730.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 290
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 170 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFA 226
NADT+ + P+ + P+LHN F N +Y P+ + +DL K T +
Sbjct: 5 NADTRYVVIFGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSLEDLSKALKTMHVFNVI 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE V++ D + A+ AVNTI+ ++ LIGYNTD + + +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTIVT--TEKGLIGYNTDGMGFLNSFMEE-- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
S SP G+ +L GAGGA +A+ F + G ++V++++ RA SL
Sbjct: 121 ---------SNVSP-EGKTLLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLVER 170
Query: 346 V------MGAARPFEDILNFQP------EKGAILANATPLGMHPNTD-RVPVSEETLRDY 392
V RP LN +P + I+ NAT +GM + + V ++ R
Sbjct: 171 VEKFFPGKSEWRP----LNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPG 226
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
Q V D VY P +T+LL D++ AG +SG M + QA F L+ G ++ E M+
Sbjct: 227 QFVCDVVYNPPETKLLADSKKAGCKTLSGDGMLVYQAAAAFKLWFGVDSDLELMK 281
>gi|406981986|gb|EKE03361.1| shikimate 5-dehydrogenase [uncultured bacterium]
Length = 289
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
G+I P+GH+ P++H H++ G Y+ + +DL F GF+V P
Sbjct: 4 LGIIGHPLGHTLSPVMHKAALDHLDIEGDYIALDTPPEDLVTRIKYLKVQGFKGFNVTIP 63
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
K + +EV A AVNT+I + L G NTD + I++I + ++
Sbjct: 64 LKVWITPLLNEVDEYANLAGAVNTVIIS-ENKSLYGCNTDIDGFISSIPENVRASLKSKN 122
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
A FG GGA RA+A G G + + F + +++ ++ P
Sbjct: 123 AAVFG------------VGGAARAVAIGLAMIGVKEITFYARNPQKAVKIKNIIFSSFP- 169
Query: 354 EDILNFQPEK-------GAILANATPLGMH-PNTDRVPVSEET---LRDYQLVFDAVYTP 402
E +N Q +I+ N TPLG+ N D P++++ L + +V+D +Y P
Sbjct: 170 EIKVNIQEFNEFANLGYASIVINTTPLGLQGVNEDISPLNKKAVGGLVENTIVYDLIYKP 229
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
R+TRL+ A++ G + G+EM + Q F+L+ KEAP + MRE VL
Sbjct: 230 RETRLITYAKSRGLYTIDGLEMLVLQGAKAFSLWMDKEAPVDIMREAVL 278
>gi|334882465|emb|CCB83483.1| shikimate 5-dehydrogenase [Lactobacillus pentosus MP-10]
gi|339638180|emb|CCC17245.1| shikimate dehydrogenase 2 [Lactobacillus pentosus IG1]
Length = 296
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 13/292 (4%)
Query: 166 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 223
E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L + +
Sbjct: 2 TERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNKKLPSAIESIRTL 61
Query: 224 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 283
D G +V P K+ V+ D++ P A+ AVNTI+ DG L GY TD + +++D
Sbjct: 62 DMRGSNVSMPNKQKVLPLLDKLDPAAEMCGAVNTIVN--DDGVLTGYTTDGIGFMKSLDD 119
Query: 284 -AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 342
I RG+K T + + V A G F ++D ++
Sbjct: 120 EGINIRGHK-MTLAGAGGAGTAIAVQAALDGVKEMSIFNLHDAEWENAQHNVDLINERTS 178
Query: 343 ASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAV 399
+ A ED +F+ E I +AT +GM P D+ V + + LR +VFD V
Sbjct: 179 CHATLHA---LEDRDDFKKEIQDSFIYTDATGVGMKPLEDKTLVDDPSWLRKDLVVFDTV 235
Query: 400 YTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
Y PR T+L+K A+ AG + +G+ M L Q F L+TG++ P +++R I+
Sbjct: 236 YAPRTTKLMKVAQEAGVEHVFNGLGMMLEQGAAAFKLWTGEDMPVDYIRHIL 287
>gi|433639425|ref|YP_007285185.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
gi|433291229|gb|AGB17052.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
Length = 291
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 133/295 (45%), Gaps = 27/295 (9%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
V+GL+ PVGHS P +H + + YV D L SS AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEARGMDATYVTFEPDRDALGDAIRGASSLGIAGLNVT 61
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTII----------RRPSDGKLIGYNTDCEASIT 279
P+KE + D V P LA I AVNTI R + + G+NTD ++
Sbjct: 62 IPFKEGAI---DHVEPDDLAARIGAVNTIAFPEGGSAGADDRDAVTRPTGHNTDAAGAVR 118
Query: 280 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERA 339
A+ +ERG+ + S A + LA GA V + + ERA
Sbjct: 119 AL----RERGFADRDDSLDGATAVVVGAGGAGRAIAFGLA----EAGATVRVANRTVERA 170
Query: 340 KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
+LAS+V A+ D L +L NAT +GM + VP E L + +V DAV
Sbjct: 171 TALASEVPDASGHGLDDLPTLLADATVLVNATSVGMESDESIVP--SEALHEDLVVMDAV 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y PR+TRLL+DA A GA V G M L Q F +TG++AP M ++ + F
Sbjct: 229 YRPRETRLLRDAAATGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGRVLRSSF 283
>gi|347759215|ref|YP_004866777.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
gi|347591733|gb|AEP10775.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
Length = 280
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 27/276 (9%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T+ GLI PV HS P++H + +G Y + + DDL + GF+V
Sbjct: 2 TRKTGLIGHPVSHSLSPVIHTHWLQQYRIDGTYTAIDIAPDDLSTRVRALVDDGYVGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+KE + CD++ AQA+ AVNT+ + G+L G+NTD + I ++ ++ +
Sbjct: 62 TLPHKEEIAFLCDDLDDTAQAVGAVNTVT-IDNRGRLHGHNTDVDGFINHLKSSVPD--- 117
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGA 349
L+G+ V+ GAGGA RA+ + + + + + ERA ++A+D+
Sbjct: 118 --------FHLSGKHAVVLGAGGAARAVLYALLREDFEWITLINRTRERAVAVANDLDDD 169
Query: 350 ARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAVYTP 402
R I++++ GA +L N T LGM T + P+ + L +V+D VY P
Sbjct: 170 GRVL--IVDWEKRGGALADTDLLVNTTSLGM---TGQAPLDMDVGGLSPNAVVYDIVYRP 224
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
T LL+ A+ G IV+G+ M L QA F+ + G
Sbjct: 225 LMTPLLQQAKMRGNTIVTGLGMLLHQARPAFDAWYG 260
>gi|419766401|ref|ZP_14292605.1| shikimate dehydrogenase [Streptococcus mitis SK579]
gi|383354137|gb|EID31713.1| shikimate dehydrogenase [Streptococcus mitis SK579]
Length = 284
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 140/307 (45%), Gaps = 55/307 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEVGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 349
SF + G+ L GAGGA +++ A G +++ +F F K+
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSFSMEKT-------- 161
Query: 350 ARPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEE 387
RP+ D L Q + +L NAT +GM + VP V E
Sbjct: 162 -RPYLDKLQEQTGFRVNLYALGDVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLSE 220
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
TL LV D +Y P +T LK A + G ++G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYQPFETPFLKWARSQGNPAINGLGMLLYQAAEAFQLWTGKEMPTEEIW 276
Query: 448 EIVLAKF 454
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|306829743|ref|ZP_07462932.1| shikimate dehydrogenase [Streptococcus mitis ATCC 6249]
gi|304428094|gb|EFM31185.1| shikimate dehydrogenase [Streptococcus mitis ATCC 6249]
Length = 284
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F + NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATDTNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++ + + GAGGA +++ A GA + F R+ S M
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGASQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQVQTGFKVDLYALEDLSDLQSRIAESDLLVNATSVGMDGKSSPVPESIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQDNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
++ K+
Sbjct: 278 SLIEKY 283
>gi|307706840|ref|ZP_07643643.1| shikimate dehydrogenase [Streptococcus mitis SK321]
gi|307617781|gb|EFN96945.1| shikimate dehydrogenase [Streptococcus mitis SK321]
Length = 284
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 140/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV + DDL+ + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEVTATNGAYVAWEIEADDLEVTVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + D + A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDVLSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKSLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQ-------------PEKGA------ILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q PE A +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLYALEDVPELQARIAGADLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A G +V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETSFLKWARNQGNPVVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|237731300|ref|ZP_04561781.1| quinate/shikimate dehydrogenase [Citrobacter sp. 30_2]
gi|226906839|gb|EEH92757.1| quinate/shikimate dehydrogenase [Citrobacter sp. 30_2]
Length = 288
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A G + + D F +A+
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRQDEFFAKAQEF 167
Query: 343 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
A+ V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 ANRVNENTDCVVTVIDLADRQAFADAL----ASADILTNGTKVGMKPLENESLVTDASLL 223
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R LV + VY P T+LL+ A++AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQSAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 450 V 450
+
Sbjct: 284 M 284
>gi|392957244|ref|ZP_10322768.1| shikimate 5-dehydrogenase [Bacillus macauensis ZFHKF-1]
gi|391876651|gb|EIT85247.1| shikimate 5-dehydrogenase [Bacillus macauensis ZFHKF-1]
Length = 281
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRH----VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 229
++ GL+ PV HS P + N F Y VP + L++ + + G +
Sbjct: 3 QLTGLLGYPVHHSVSPQMQNAAFNEQGLSFEYEKFNVP--PEQLQQAVEALKTFHYKGCN 60
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P+K AVM F DE+ A+ I AVNTI+ +G L+GYNTD + +E + R
Sbjct: 61 VTIPHKTAVMPFLDEISEEARRIGAVNTIVNE--NGVLVGYNTDGAGFVKGVERLMNRRI 118
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMG 348
T ++ GAGGA RA+ + ++ +VV I + +A +A+D +
Sbjct: 119 SSQDT-----------ILVIGAGGASRAICYALANKNPKVVAIANRTEAKATQIANDCL- 166
Query: 349 AARPFEDILNFQPEKG-----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
R + +L+ Q + I+ N T +GM+ + D +P+S L + V D +Y P
Sbjct: 167 --RESDVVLSLQQAEEQLASFGIVINTTSMGMNED-DPLPLSLTHLNEGTYVIDIIYNPF 223
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+T+ L A+ GAII +GV M + Q F +TGKE M +IV+
Sbjct: 224 QTKWLTLAKEKGAIIDNGVAMLVFQGALAFTKWTGKEPNVSLMEQIVV 271
>gi|296813541|ref|XP_002847108.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
gi|327507651|sp|C5FQ73.1|ARO1_ARTOC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238842364|gb|EEQ32026.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
Length = 1571
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 189/453 (41%), Gaps = 39/453 (8%)
Query: 7 RPKWAGGLYEGDE-HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
R K GG + D K LE LA +G+++VD EL +++L + G I++
Sbjct: 1122 RTKAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPNDLL--HAVTEMKGFSKIIAS 1179
Query: 66 NLDCETPSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPII 119
+ D + G + DIIKL+ + + Q S + VPII
Sbjct: 1180 HHDVNSQLSWSNGSWIQYYNKALQHGDIIKLIGVAKTFEDNMALQQFKSWAEKSYPVPII 1239
Query: 120 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 179
A ++G +G +S++L+ +F + + +L G + + +RQ + D K F L
Sbjct: 1240 AINMGNKGRLSRILN-RFMTPVSHPALPFKAAPGQVSAKDIRQALTLMG-ELDAKKFALF 1297
Query: 180 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 239
KP+ S+ P LHN F + Y + D + S DF G SV P KE +M
Sbjct: 1298 GKPISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRSDDFGGASVTIPLKEQIM 1357
Query: 240 KFCDEVHPLAQAIAAVNTIIRRPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
DE+ P A+ I AVNTI+ G +LIGYNTD + ++DA G
Sbjct: 1358 GLLDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKDA--------GAIC 1409
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 356
+ G + G+GG RA + S G + R S S + + +I
Sbjct: 1410 SNN---GESALTIGSGGTARAAIYSLHSMGYSPIYL---VGRTPSNLSKLASSFPAEYNI 1463
Query: 357 LNFQPEKGAILANATPLGMHPNTDRV--PVSE------ETLRDYQ---LVFDAVYTPRKT 405
Q K A + P + P+ E E +D ++ D Y P T
Sbjct: 1464 QVVQDIKSVQAAPKVAISTIPGDQELENPLPELITQIMEKGQDSSRECILLDMAYKPDVT 1523
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
+ + A AG I+ G+E+ + Q I QF +TG
Sbjct: 1524 TMARLASPAGWKIIKGLEVLVAQGIYQFEHWTG 1556
>gi|271499360|ref|YP_003332385.1| Shikimate dehydrogenase substrate-binding domain-containing protein
[Dickeya dadantii Ech586]
gi|270342915|gb|ACZ75680.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech586]
Length = 288
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N V Y+ VD+ + + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEEVGLPYTYMAFEVDNTTFPQAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ + DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACDYVDELTPAAKLVGAINTIVN--DDGYLKGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A G + + D +E+A +
Sbjct: 117 ESGFD---------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRRDEFYEKALAF 167
Query: 343 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
A V +G + F D + IL N T LGM P + V++++L
Sbjct: 168 AKRVNDNTDCIVTVHDLGDQQAFADAI----ASADILTNGTKLGMKPLENESIVTDKSLL 223
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
R LV + VY P T+LL+ A AG + G M L Q QF L+TGK+ P E++++
Sbjct: 224 RPGLLVTECVYNPHITKLLQMAMDAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYIKK 282
>gi|452205994|ref|YP_007486116.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
gi|452082094|emb|CCQ35345.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
Length = 264
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+VFGLI PVGHS P +H + + YV D + + + + AG +V
Sbjct: 2 QVFGLIGNPVGHSVSPPMHEAAYEVCGMDARYVTFEPDPGSIDRVLTGADALGIAGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE V D PLA I AVNT+ DG GYNTD + A+E +
Sbjct: 62 IPFKEDVAAAVD-TDPLAGRIGAVNTVAFE--DGP-TGYNTDASGVVRALEHHDVALSGR 117
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
G F LA G V I + ERA++LA+ V GA+
Sbjct: 118 AVVVGAGGAGRAAAFALA--------------DGGMDVHIANRTVERAEALAAAVPGASS 163
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
D L +L NAT +GM ++ PV + L V DAVY P +TRLL DA
Sbjct: 164 GGLDGLTAALSGADVLVNATSVGME--SEETPVPKAALHADLAVLDAVYAPLETRLLADA 221
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
GA V G M L Q + F ++TG++AP E M E
Sbjct: 222 AEVGATTVDGAWMLLFQGVEAFEIWTGRDAPVETMNE 258
>gi|409721662|ref|ZP_11269827.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|448723857|ref|ZP_21706372.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|445786924|gb|EMA37678.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
Length = 265
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 134/283 (47%), Gaps = 21/283 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
+VFGL+ PV HS P +H + + + YV D DL+ + G +V
Sbjct: 2 QVFGLLGNPVSHSLSPPMHEAAYDELGMDARYVTFEPDESDLETAIEGARALGIEGLNVT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K+AV+ CD LA I AVNT+ ++ G+NTD G
Sbjct: 62 IPFKQAVLDHCDP-DDLATRIGAVNTLDFGGE--EVTGHNTDA-------------VGVT 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
A PLAGR VL GAGGAGRA AF G V I + A LA V GA+
Sbjct: 106 RAFAHHDVPLAGRA-VLVGAGGAGRAAAFALADEGIEVSIANRTVGTAHDLAEAVDGASG 164
Query: 352 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 411
D L+ +L NAT +GM D PV E L V DAVY+P +TRLL+DA
Sbjct: 165 HGLDELDGLLAGADLLVNATSVGM--EGDESPVPEGALHGDLAVLDAVYSPIETRLLRDA 222
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AAGA V G M L Q + F +TG+EAP E M + A+
Sbjct: 223 RAAGATTVDGGWMLLYQGVAAFERWTGREAPIEAMNRALRARI 265
>gi|254466135|ref|ZP_05079546.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206687043|gb|EDZ47525.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 277
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 171 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGF 228
A + G+I PV HSK P LH + G YVPM V+ DL + F G
Sbjct: 4 AKIPLAGVIGCPVSHSKSPQLHGHWLKTHRIAGHYVPMHVEPADLAEAIRAMPKMGFVGA 63
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
+V P+KEAVM D+V A+ I A NT+I R DG ++ NTD +T + +
Sbjct: 64 NVTIPHKEAVMGIADKVTDRAKLIGAANTLIFR-EDGTILADNTDGYGFVTNLHQGAPDW 122
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVM 347
++G A V+ GAGGA RA+ G +++ + ERA+ L D
Sbjct: 123 DPQSGPA-----------VVLGAGGACRAVVASLIEAGVPEILLSNRTRERAEQLQKDFG 171
Query: 348 GAARPFEDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
R E + E+G ++ N T LGM R+ V + LR +V D +Y P KT
Sbjct: 172 NRIRVVEWLQAGNAIEEGRLIVNTTSLGM-VGKPRLRVPLDGLRSDAVVTDLIYAPLKTG 230
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
LL+ AE AG +V G+ M L QA+ F + G
Sbjct: 231 LLETAEEAGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|270292497|ref|ZP_06198708.1| shikimate dehydrogenase [Streptococcus sp. M143]
gi|270278476|gb|EFA24322.1| shikimate dehydrogenase [Streptococcus sp. M143]
Length = 284
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF ++ + + GAGGA +++ A G V + + E+ + + +
Sbjct: 112 FKSLPSFA--ISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLAKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQSRIAESDLLVNATSVGMDGQSSPVPESI-NLPEALLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|312621914|ref|YP_004023527.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
gi|312202381|gb|ADQ45708.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
Length = 288
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTY-SSPDFAGFSVGFP 233
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEKLKEFVEMVRKDEDVVGFNITIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE ++KFCDEV + I A NT+ + + KL+ YNTD G+K
Sbjct: 66 YKEDILKFCDEVSEDVRIIKAANTV--KKENEKLLAYNTDW-------------IGFKRS 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAAR- 351
+ + ++ G+GGA +A +G GA V + + +E+A+SL +
Sbjct: 111 LEDMEVDVKDKKILVLGSGGAAKACIYGLYRMGAEEVFVANRTYEKAESLKETFQNILKI 170
Query: 352 -PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAVYTPRKT 405
P E I ++ K I+ N T +GM PN + P E +Y V+D +Y P KT
Sbjct: 171 VPVEWIRRYEF-KYDIIINTTSVGMFPNIESSPFDFE---NYVAGIPVFVYDMIYNPLKT 226
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAI 430
LK+AE G I +G++M + QAI
Sbjct: 227 AFLKEAEKKGIKIENGLKMLVYQAI 251
>gi|402302379|ref|ZP_10821493.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
gi|400380598|gb|EJP33412.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
Length = 286
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G++ P+ HS P+L N R + +YV P+ + L+ F
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKREALRSAVLGLRDAGFC 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDTLDEDARRIGAVNTVVV-GADGRLTGHNTDTA----------- 109
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 345
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAHAVVFGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 346 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
YTP +TR L++A G V+G M Q F L+TG MR ++
Sbjct: 228 YTPAETRFLREAARHGHRCVNGETMLAAQGAEAFFLWTGVRPDLLCMRRVL 278
>gi|448377077|ref|ZP_21560001.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
gi|445656303|gb|ELZ09141.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
Length = 291
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 133/299 (44%), Gaps = 37/299 (12%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 232
V+GL+ PVGHS P +H + + YV D L S AG +V
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYEACEMDATYVTFEPDRDALGDAIRGAGSLGIAGLNVTI 62
Query: 233 PYKEAVMKFCDEVHP--LAQAIAAVNTII---------------RRPSDGKLIGYNTDCE 275
P+KE + D V P LA I AVNTI RP+ G+NTD
Sbjct: 63 PFKEGAI---DHVEPDELAARIGAVNTIAFPEPDAAGADDRDAVARPT-----GHNTDAA 114
Query: 276 ASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 335
++ A+ +ERG+ + S A + LA GA V + +
Sbjct: 115 GAVRAL----RERGFADRDDSLDGATAVVVGAGGAGRAIAFGLA----EAGATVRVVNRT 166
Query: 336 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 395
ERA SLAS+V A+ D L +L NAT +GM + VP E L + +V
Sbjct: 167 VERATSLASEVPDASGHGLDGLPTLLAGATVLVNATSVGMESDESIVPT--EALHEDLVV 224
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
DAVY PR+TRLL+DA AAGA V G M L Q F +TG++AP M + + + F
Sbjct: 225 MDAVYRPRETRLLRDATAAGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGQALRSSF 283
>gi|417934921|ref|ZP_12578241.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
gi|340771491|gb|EGR94006.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
Length = 284
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNKAFEATAANGVYVAWEIEAGDLAETIANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF ++ + + GAGGA +++ A GA V + + E+ + +
Sbjct: 112 FKSLPSFA--ISDKKMTILGAGGAAKSILAQAILDGASQISVFVRSVSMEKTRPYLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 KQTGFKVDLYALEDVSKLQARIAESDLLVNATSVGMDGQSFPVPESI-NLPENLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDQIWQSLTEKY 283
>gi|317968332|ref|ZP_07969722.1| shikimate 5-dehydrogenase [Synechococcus sp. CB0205]
Length = 303
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 137/315 (43%), Gaps = 36/315 (11%)
Query: 159 SLRQTYKVE-HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKK 215
S R T E I T + G++ PV HS P++HN + + Y+ P +L
Sbjct: 6 SARTTVNAEARIQGSTALVGVLGDPVRHSLSPVMHNVALEAMGLDWAYLALPTPTAELGT 65
Query: 216 FFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 275
+ G +V P+K+AV C E+ PLA+ + AVNT++ R G L G NTD E
Sbjct: 66 VVQALEAMGCRGLNVTIPHKQAVAALCSELSPLAERLGAVNTLVPRQGGGWL-GTNTDVE 124
Query: 276 ASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDI 334
+ + S+ S R VL G GG+ RA+ G G A +V+
Sbjct: 125 GFCAPLRE-----------VSWSSK---RALVL-GCGGSARAVVAGLVELGFAEIVLAGR 169
Query: 335 DFERAKSLASDVMGAARPFEDILNFQPEKGAILA------NATPLGMHPNTDRVPVSEET 388
E ++ +D A P L++ A LA N TP+GM TD
Sbjct: 170 RPEVLEAFQADCRSWA-PQLSTLSWDSGIAATLAQADLLVNTTPVGMASATDPAAAQACP 228
Query: 389 LRDYQL--------VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK- 439
L D +L V+D +YTPR T LL+ A A G + G+ M + Q L++G+
Sbjct: 229 LSDSELAALSAEAWVYDLIYTPRPTALLQRATAKGCRSLDGLRMLVEQGAASLRLWSGRS 288
Query: 440 EAPKEFMREIVLAKF 454
E P E M + L +
Sbjct: 289 EVPVEVMHQAALRQL 303
>gi|315658128|ref|ZP_07911000.1| shikimate dehydrogenase [Staphylococcus lugdunensis M23590]
gi|418637142|ref|ZP_13199472.1| shikimate dehydrogenase [Staphylococcus lugdunensis VCU139]
gi|315496457|gb|EFU84780.1| shikimate dehydrogenase [Staphylococcus lugdunensis M23590]
gi|374839832|gb|EHS03340.1| shikimate dehydrogenase [Staphylococcus lugdunensis VCU139]
Length = 271
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 132/285 (46%), Gaps = 28/285 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
F +I P+ HS P++HN F+ +N Y I+VP + + + GF+V
Sbjct: 3 FAVIGDPISHSLSPLMHNANFKALNMRHTYEAIHVPR--EHFHHIKDIIAEKEIDGFNVT 60
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KEA++ + D + A+ I AVNTI + GK IGYNTD GY
Sbjct: 61 IPHKEAIIPYLDVIDDTAKNIGAVNTIAIK--QGKWIGYNTDG-------------IGYV 105
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 350
G + ++ GAGGA + +A K ++ + + +R S DV +
Sbjct: 106 TGLKHIYPDIEHAYILILGAGGASKGIAHELIKYVEPKITVANRTAKRFDSWTLDVNKIS 165
Query: 351 -RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
E LN + I+ N TP+GM + V VS L LV D VY P KT L
Sbjct: 166 LETAERHLN----QFDIIINTTPVGMSQSKASV-VSLSNLSPQTLVSDIVYIPAKTPFLD 220
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
AE G I +G++MF+ Q FN++TG+ A M++ V+ K
Sbjct: 221 QAEQNGNPIYNGLDMFILQGAASFNIWTGQTANINTMKQTVINKL 265
>gi|404329984|ref|ZP_10970432.1| shikimate dehydrogenase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 304
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 37/293 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPDFAG 227
I+ T+++GL + P HS P++HN +FR N +Y+ D + + G
Sbjct: 5 IDGRTRLYGLFAHPAVHSLSPLMHNLSFRRRQINAVYLAFDITSDFSDAIRSIRQLNMGG 64
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
++ P+K+ V+ + +E+ P A+ + AVNT++ R G LIG NTD T ++
Sbjct: 65 VNLSMPFKKQVIPYLNELTPTAKMVGAVNTVVHR--QGHLIGANTDG----TGFFANLRA 118
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
R Y L G+ + GAGGAG ++ S G ++ F+R V
Sbjct: 119 RHYT---------LRGKTATVLGAGGAGLSIIAAGASEGLGMIHV---FKRRNVTFPKVE 166
Query: 348 GAARPFEDI---------------LNFQPEKGAILANATPLGMHPNTDRVPVSEE---TL 389
R F I L L N T +GM + +P++ E L
Sbjct: 167 AKLREFAQIYQTPILLHAYDDQTDLKRAVRASDFLINTTNIGMGNDRQSMPLTGEEMGAL 226
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
+V D +Y PRKTRLL++AEA G V+G+ M + Q F L+T +E P
Sbjct: 227 LPSSVVCDIIYEPRKTRLLQEAEARGCETVNGLGMLIYQGAQSFKLWTHEEMP 279
>gi|56751646|ref|YP_172347.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 6301]
gi|81301276|ref|YP_401484.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 7942]
gi|56686605|dbj|BAD79827.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 6301]
gi|81170157|gb|ABB58497.1| shikimate dehydrogenase [Synechococcus elongatus PCC 7942]
Length = 288
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 30/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA--GFSV 230
T++ G+I P+ HS P++ N + + YVP V + GF+V
Sbjct: 8 TRLLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQGFNV 67
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K+AVM +V LAQ++ +VNT+ + ++ +G NTD G+
Sbjct: 68 TIPHKQAVMPLLSQVSELAQSVGSVNTVWQ--TEQGWVGTNTDV-------------LGF 112
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID----FERAKSLA 343
+ S +G VL G GGA RA+ G G V+ D F+++
Sbjct: 113 LAPLQTLRSDWSGCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQSWGDR 172
Query: 344 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV---SEETLRDYQLVFDAVY 400
+D + + DI + ++ N TPLGM P+ +R P+ + + LR + +D +Y
Sbjct: 173 ADSL-TIHDWSDIPDVL-STADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAYDLIY 230
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMREIVLAKF 454
TP TR L+ A A G + G+EM ++Q ++TG EA P + MR ++ A
Sbjct: 231 TPSPTRFLQQAIAQGCHAIDGLEMLVQQGAAGLKIWTGAEAVPVDTMRSVLNAHL 285
>gi|320528873|ref|ZP_08029965.1| shikimate 5-dehydrogenase [Selenomonas artemidis F0399]
gi|320138503|gb|EFW30393.1| shikimate 5-dehydrogenase [Selenomonas artemidis F0399]
Length = 286
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G++ P+ HS P+L N R + +YV P+ + L+
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKREALRSAVLGLRDAGVC 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDALDEDARRIGAVNTVVV-GADGRLTGHNTDAA----------- 109
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 345
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAHAVVFGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 346 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGGVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
YTP +TR L++A G V+G M Q F L+TG +MR ++
Sbjct: 228 YTPAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWTGVRPDLVYMRRVL 278
>gi|448698250|ref|ZP_21698889.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
gi|445780869|gb|EMA31739.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
Length = 268
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 140/291 (48%), Gaps = 34/291 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 231
VFGL+ PVGHS P +H + + + YV DDL+ ++ AG +V
Sbjct: 2 DVFGLVGNPVGHSLSPPMHEVAYDALEIDARYVTFEPAPDDLETALEGAAALGIAGLNVT 61
Query: 232 FPYKE-AVMKFCDEVHPLAQAIAAVNTII---RRPSDGKLIGYNTDCEASITAIEDAIKE 287
P+KE A+ LA I AVNTI RP+ G+NTD ++ A+ +E
Sbjct: 62 IPFKEDALASDLVAADELANRIGAVNTIDFSGDRPT-----GHNTDAAGALRAL----RE 112
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
R + G V+ GAGGAGRA++FG GA V I + +A LA +V
Sbjct: 113 RDVT---------VDGARAVVVGAGGAGRAISFGLADAGATVSIANRTEAKAHDLADEVP 163
Query: 348 GAA----RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
GA ED+L IL NAT +GM D PV E L V DAVY P
Sbjct: 164 GATGHGLETLEDLL----ADAEILVNATSVGME--EDATPVPAEALHGGLAVLDAVYRPL 217
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+TRLL DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 218 ETRLLSDAAAAGATTVDGARMLLYQGVEAFELWTGRDAPVSTMDEALRARL 268
>gi|291519149|emb|CBK74370.1| shikimate 5-dehydrogenase [Butyrivibrio fibrisolvens 16/4]
Length = 284
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T+++ L+ PV HS P +HN F + + Y+ V DDL K + + GF+
Sbjct: 7 TRLYCLLGNPVSHSISPAMHNLAFDTLGLDNSYMAFNVEPDDLSKVVEGLKAINCGGFNC 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +++ DE+ +A +VNT++ R DGKL GY TD G+
Sbjct: 67 TMPFKTSIIPLLDEIDEVASLAHSVNTVVNR--DGKLFGYTTD-------------GIGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD---------IDFER-- 338
A G + GAGG ++ A + G +++ IF +D+
Sbjct: 112 LQSMAECNIKYKGATISMLGAGGVATSIMTQAATEGVSKISIFKRKNATFDNVVDYADRI 171
Query: 339 AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
+K+ DV +DI+ F ++ IL N T +GM + D V +E L V D
Sbjct: 172 SKATECDVFVYDIADKDIMEFSLQESDILINGTNVGMGDD-DTSLVPKEFLHQNLTVCDT 230
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+Y P TRLLKDA + G ++G M L Q F L+T ++ P + ++
Sbjct: 231 IYHPEMTRLLKDAASLGCKTMNGKYMLLYQGAAAFKLWTNQDMPVDIVK 279
>gi|420366577|ref|ZP_14867414.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
gi|391324093|gb|EIQ80704.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
Length = 288
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 30/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A G + + IF D F +A++
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKIFNRKDEFFAKAQAF 167
Query: 343 ASDVMGAARPFEDILNFQPEKG--------AILANATPLGMHP-NTDRVPVSEETLRDYQ 393
A V +++ + IL N T +GM P + + + LR
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFAEALASADILTNGTKVGMKPLDNESIVTDVSLLRPEL 227
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
LV + VY P TRLL+ A+ AG + G M L Q QF L+TGK+ P E++++++
Sbjct: 228 LVTECVYNPHMTRLLQQAQHAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQVM 284
>gi|417794869|ref|ZP_12442104.1| shikimate dehydrogenase [Streptococcus oralis SK255]
gi|334266731|gb|EGL85203.1| shikimate dehydrogenase [Streptococcus oralis SK255]
Length = 284
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 349
SF ++ + + GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGISQISVF---------VRSVSMKK 160
Query: 350 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLR 390
RP+ ED+ Q + K +L NAT +GM + VP S L
Sbjct: 161 TRPYLDKLQEQTGFKVDLYALEDLSELQEKIAKSDLLVNATSVGMDGQSSPVPESI-NLP 219
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+ LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + +
Sbjct: 220 EALLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSL 279
Query: 451 LAKF 454
K+
Sbjct: 280 TEKY 283
>gi|343525459|ref|ZP_08762414.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395729|gb|EGV08267.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 250
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 35/260 (13%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 2 KIDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 62 FGINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG----------- 108
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSL 342
+G+ SF + G+ ++ GAGGA A+ A G + +F FER
Sbjct: 109 --KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGVDEIFVFTRKTSFERVSQQ 164
Query: 343 ASDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ- 393
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 165 MKQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP---DTIRLSKS 221
Query: 394 -LVFDAVYTPRKTRLLKDAE 412
LV D +Y P +T LK A+
Sbjct: 222 LLVADVIYQPFETPFLKWAK 241
>gi|421844137|ref|ZP_16277296.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411775044|gb|EKS58512.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455646342|gb|EMF25369.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii GTC 09479]
Length = 288
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 38/301 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 342
E G+ + G+ VL GAGGA A+ A G + + D F +A+
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRQDEFFAKAQEF 167
Query: 343 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 389
A V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFADAL----ASADILTNGTKVGMKPLENESLVTDASLL 223
Query: 390 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
R LV + VY P T+LL+ A++AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQSAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 450 V 450
+
Sbjct: 284 M 284
>gi|315303238|ref|ZP_07873886.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313628395|gb|EFR96880.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 273
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 36/289 (12%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 231
+I P+ HS P + N F+ + + Y + +++ +KK ++ GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYHSVLIEEDAFETEIKKLMAS----GIRGFNIT 61
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE ++ F DE+ PLA AVNT++R+ +GK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEPLAVDSGAVNTVLRK--EGKWYGFNTDG-------------KGYL 106
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 345
G ++ GAGGA +A+ K+ A++ I + E+A + +
Sbjct: 107 EGLEEIRPITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHNNHY 166
Query: 346 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
M +++ +F I+ T +G+ + ++ P+S L+ + D +Y P +T
Sbjct: 167 AMTLEEAEKNLADF-----TIIIQTTSIGLEASKNKSPISLSNLKKGTVCSDIIYNPAET 221
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A+ GAII +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAIIQNGLSMFVNQGALAFEIWTGVKPRRSLMKEAVLEQL 270
>gi|365838921|ref|ZP_09380176.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
gi|364566130|gb|EHM43830.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
Length = 292
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
E + T++ GLI+ P+ HS P +HN F+ + + +YV VD+ L+ +
Sbjct: 8 ERVTGHTELIGLIAYPIRHSMSPTMHNEAFKKLGLDYVYVCFEVDNSTLEDTVKGLRAMK 67
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G++V P K + ++ D++ P++Q + A NT++ +G L G TD ++ +
Sbjct: 68 VRGWNVSMPNKGPITRYLDKLSPVSQIVGACNTVVN--DNGVLTGTITDGTGAM----QS 121
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
+KE G + G+M V+ GAGGA A+ A GA+ + +F D F +A+
Sbjct: 122 LKEEGV--------DYVGGKMTVV-GAGGAATAIIVQAALDGAKEITVFNRRDEFFPKAE 172
Query: 341 SLA------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRD 391
+ +D D N + E I + T GM P D V + +++ L
Sbjct: 173 KVVAQLNDRTDCKVTLYDLADHENLKRELDSSDIYIDGTSCGMKPLEDVVAIPDKSYLHK 232
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+V D VY PR+T+L++ AE G +G+ M L Q F L+TGK+ P +++++I+
Sbjct: 233 ELIVMDTVYAPRETKLMRWAEEVGCHTFNGLGMMLYQGAAAFKLWTGKDMPVDYIKDILF 292
>gi|168484554|ref|ZP_02709506.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC1873-00]
gi|417696554|ref|ZP_12345733.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47368]
gi|418107800|ref|ZP_12744838.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41410]
gi|418110339|ref|ZP_12747362.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA49447]
gi|418162427|ref|ZP_12799110.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17328]
gi|418169392|ref|ZP_12806035.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA19077]
gi|418176179|ref|ZP_12812773.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41437]
gi|418219107|ref|ZP_12845773.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae NP127]
gi|418221419|ref|ZP_12848072.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47751]
gi|418238926|ref|ZP_12865479.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419423163|ref|ZP_13963377.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43264]
gi|419460197|ref|ZP_14000126.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA02270]
gi|419462543|ref|ZP_14002448.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA02714]
gi|419489463|ref|ZP_14029212.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44386]
gi|419526099|ref|ZP_14065661.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA14373]
gi|421272942|ref|ZP_15723784.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SPAR55]
gi|172042237|gb|EDT50283.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC1873-00]
gi|332201829|gb|EGJ15899.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47368]
gi|353779983|gb|EHD60447.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41410]
gi|353782542|gb|EHD62976.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA49447]
gi|353827399|gb|EHE07551.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17328]
gi|353834577|gb|EHE14678.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA19077]
gi|353841618|gb|EHE21673.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41437]
gi|353874243|gb|EHE54099.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae NP127]
gi|353874729|gb|EHE54583.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47751]
gi|353893328|gb|EHE73074.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379531016|gb|EHY96252.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA02714]
gi|379531202|gb|EHY96437.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA02270]
gi|379558359|gb|EHZ23395.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA14373]
gi|379586327|gb|EHZ51179.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43264]
gi|379587005|gb|EHZ51855.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44386]
gi|395874596|gb|EJG85679.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SPAR55]
Length = 284
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 140/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + D++ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDKLSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S MG
Sbjct: 112 FKCLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MGKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|384452778|ref|YP_005665375.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
gi|334695467|gb|AEG88683.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
Length = 477
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 181/416 (43%), Gaps = 38/416 (9%)
Query: 25 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRM 84
+ LAE L +Y+D + L K ++ + I+S + D + E + L + M
Sbjct: 72 TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKIILSYHSD----TSEHIPNLCNEM 125
Query: 85 QATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYG 144
A K+ + + R Q+ H +G G+ S++LSP A+ Y
Sbjct: 126 LRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYA 185
Query: 145 SLKGTP--VLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 202
S P V G ++E L Y +++++++++GLI PV S + HN F + N
Sbjct: 186 SGINAPKVVQGQLSIEDLL-AYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLN 244
Query: 203 GIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
Y+ + + +L +FFS F G SV P+K V+++ D + P Q + NT++
Sbjct: 245 MSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVF 304
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 320
R D K+ GYNTD G N L + + G+GGA +A+A
Sbjct: 305 R--DNKIAGYNTD-------------GLGLLNLLKRKNILLQNKHVGIVGSGGAAKAIAT 349
Query: 321 GAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD 380
GA++ IF+ A+ L+ G A P LN E I + L + P+ +
Sbjct: 350 TFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----LNALSENHNI--DILILCLPPDVE 403
Query: 381 RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
+ ++ D P+++ K A+ G I+ G EMF QA+ QF+L+
Sbjct: 404 IPEIYPP------VIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|238917253|ref|YP_002930770.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
gi|238872613|gb|ACR72323.1| shikimate 5-dehydrogenase [Eubacterium eligens ATCC 27750]
Length = 290
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 35/296 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I T+V GLI PVGHS P +HN R + +Y V+ D++ S +
Sbjct: 3 IKGTTRVCGLIGNPVGHSVSPAIHNNLARLTGKDMVYTTFKVEKGDVEAAVRGAYSLNIL 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K V+ ++ PLA+AI AVNT++R +DG GYNTD +ED
Sbjct: 63 GLNVTVPHKSEVIDSLVDIDPLAKAIGAVNTLVR--ADGGFKGYNTDILGLARELEDE-- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 345
G LA ++ GAGGA RA+ F S+GA ++ + + ++A+ +A
Sbjct: 119 -----------GIELADSKVIILGAGGAARAITFLCSSKGAKKIYLLNRSVDKAQDIAHA 167
Query: 346 V-----------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
V M A + DI P I+ T +G+HPN V + +E+
Sbjct: 168 VNTHFNNEKVIPMNIA-DYADI----PGDDYIVIQTTSVGLHPNDTAVVIDDESFYKKAA 222
Query: 395 V-FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
V D +Y P +T +K +A G +G++M L Q + + L+ + K+ E+
Sbjct: 223 VGVDIIYNPAETMFMKLIKAQGKKAYNGLKMLLYQGVSAYELWNDCKISKKEADEV 278
>gi|332653770|ref|ZP_08419514.1| shikimate dehydrogenase [Ruminococcaceae bacterium D16]
gi|332516856|gb|EGJ46461.1| shikimate dehydrogenase [Ruminococcaceae bacterium D16]
Length = 407
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 42/278 (15%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
GLI + +GHS P +H+ NY +P+ +++ F +F G +V PYK+
Sbjct: 4 GLIGRKLGHSFSPKIHSLLG---NYPYRLIPLEPEEVGDFLR---KGEFHGLNVTIPYKK 57
Query: 237 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 296
VM++C E+ P A+ I + NTI+RRP DG L+G NTD + + ++ A
Sbjct: 58 TVMEYCAELTPAARRIGSANTILRRP-DGTLLGDNTDYDGFLYLLKSA------------ 104
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 356
G+ + GR ++ G+GGA S R V+ ++ A +++ +R E+
Sbjct: 105 -GAQVEGRKALVLGSGGA---------SLTVRSVLSELG-------AREIITISRSGEN- 146
Query: 357 LNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
N+Q I+ NATP+GM+P PV + + VFD +Y P KT+LL A+
Sbjct: 147 -NYQNLDRHADAQIIVNATPVGMYPGNGVSPVDLDQFPQCEGVFDLIYNPSKTQLLLQAQ 205
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
G I +G+ M + QA F GK+ P E + +I
Sbjct: 206 RRGLIWGNGLGMLVAQAKAASERFQGKKLPDELVADIT 243
>gi|325297310|ref|YP_004257227.1| shikimate dehydrogenase [Bacteroides salanitronis DSM 18170]
gi|324316863|gb|ADY34754.1| Shikimate dehydrogenase substrate binding domain protein
[Bacteroides salanitronis DSM 18170]
Length = 247
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 27/268 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYS-SPDFAGFSVGF 232
K FGLI P+GHS N F N + Y+ + ++ F + +PD G +V
Sbjct: 2 KKFGLIGYPLGHSFSKNFFNEKFASENIDAQYINFEIPTIEDFPKVVTMNPDLCGLNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG--KLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ F D V P+A I AVN I G KL GYN+D +IE ++
Sbjct: 62 PYKEKVISFLDRVDPVAAKIGAVNVIKFEQVKGKLKLAGYNSDVIGFTRSIESLLESYHK 121
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
K ++ G GG+ +A+ +G K G + + +++ D +
Sbjct: 122 KA--------------LILGTGGSSKAINYGLKELGLETLFVSRNQHNEQTITYDELTP- 166
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
+I+ ++ ++ N TP+GM+P D+ P + E L L++D +Y P T +K
Sbjct: 167 ----EIM----DEYKVIVNCTPVGMYPQADQCPNIPYECLTSKHLLYDLLYNPDTTLFMK 218
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 437
GA + +G+EM L QA G + ++
Sbjct: 219 KGSDRGAAVKNGLEMLLLQAFGSWEIWN 246
>gi|302872326|ref|YP_003840962.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
gi|302575185|gb|ADL42976.1| shikimate 5-dehydrogenase [Caldicellulosiruptor obsidiansis OB47]
Length = 279
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 43/271 (15%)
Query: 178 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTY-SSPDFAGFSVGFP 233
LI K + HS P +HN + + +Y + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFVHNKILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVIGFNITIP 65
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE +++FCDEV + I A NT+ + +GKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEEGKLLAYNTDW-------------IGFKKS 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 352
G + + ++ G+GGA +A +G GA+ V + + +E+A+ L
Sbjct: 111 LEDIGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAERL-------REV 163
Query: 353 FEDILNFQPE--------KGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAV 399
F+DIL P K I+ N T +GM+PN + P E +Y V+D +
Sbjct: 164 FQDILKILPVEWLRRYEFKYDIIINTTSVGMYPNIESSPFDFE---NYVAGIPVFVYDMI 220
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 430
Y P KT L+ AE G+ +G++M + QA+
Sbjct: 221 YNPPKTTFLEKAEKKGSKTENGLKMLVYQAV 251
>gi|325852020|ref|ZP_08171103.1| putative shikimate dehydrogenase [Prevotella denticola CRIS 18C-A]
gi|327312413|ref|YP_004327850.1| putative shikimate dehydrogenase [Prevotella denticola F0289]
gi|325484576|gb|EGC87492.1| putative shikimate dehydrogenase [Prevotella denticola CRIS 18C-A]
gi|326944488|gb|AEA20373.1| putative shikimate dehydrogenase [Prevotella denticola F0289]
Length = 250
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + + N Y+ + + F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFHNEHINAAYINFEIPSIDDFIEVVDSNPELRGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
KE V+ + D + P A+AI AVN I + S L G+N+D +IE + ER +
Sbjct: 64 KEQVIDYLDSLSPEAKAIGAVNVIRVTHKGSKTLLKGFNSDVIGFTRSIEPLL-ERHH-- 120
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM--GAA 350
R ++ G GGA +A+ +G KS G +F +R L D + G
Sbjct: 121 -----------RKALILGTGGASKAVNYGLKSLGLET-MFVSRTKRNGVLTYDEITPGIV 168
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 409
R + ++ N TPLGM+P TD P + E + + L++D +Y P +T +
Sbjct: 169 REYN-----------VIVNCTPLGMYPKTDVCPALPYEAMDSHTLLYDLLYNPDETLFMA 217
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
GA++ +G+EM L QA + + GKE
Sbjct: 218 KGREQGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|374324961|ref|YP_005078090.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
gi|357203970|gb|AET61867.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 22/285 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALKAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + ++++ +
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYVRSLKEETSVK---- 128
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 351
L G + GAGGA R + + + V+I + ++A+ LA + A
Sbjct: 129 --------LKGTRIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAI 180
Query: 352 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
P N + E +L N T +GM P +D +P+ + + +V D +Y P +TR
Sbjct: 181 PVTGYSNDEAESVLASVDVLINTTSVGMSPLSDELPLETSLIPEGIIVSDLIYNPLETRF 240
Query: 408 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
L+++ E G + G+ MF+ Q F F G + MR VL
Sbjct: 241 LRESREQRGCTVHGGLGMFVYQGAVAFEYFMGVAPAVDEMRAAVL 285
>gi|156743354|ref|YP_001433483.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
gi|156234682|gb|ABU59465.1| shikimate 5-dehydrogenase [Roseiflexus castenholzii DSM 13941]
Length = 283
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 140/286 (48%), Gaps = 37/286 (12%)
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPY 234
G+I PV HS P LH+ F H+ Y L ++ +P G +V P+
Sbjct: 7 GVIGDPVSHSLSPFLHHAAFEHLGIAARYERWQTSSAALPARVASLRAPHVLGANVTLPH 66
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKNG 293
K AV++ D + PLA I AVNTI+R P DG+L G NTD A+I + EDA
Sbjct: 67 KIAVVRLLDRLDPLAAQIGAVNTIVRLP-DGQLEGCNTDAPATIATLREDA--------- 116
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALA---FGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
G AGR V+ GA GA RA A GA R + + + + ERA+ L +DV+ A+
Sbjct: 117 ----GVDPAGRRVVILGASGAARAAAFALIGA--RASMLTVINRTLERAEELLADVL-AS 169
Query: 351 R---PFEDILNF-QPE------KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 400
R P+ L P+ ++ NAT LG H D P+ + LVFD VY
Sbjct: 170 RDDDPYLRALALDDPDVPDAIRAADVIINATSLGWH--RDETPLPGYLIPATALVFDMVY 227
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 446
P TRLL++A AGA + G M +RQA F +TG AP + M
Sbjct: 228 QP--TRLLREAAQAGASTLDGRGMLVRQAALSFERWTGAPAPLDVM 271
>gi|398899911|ref|ZP_10649237.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM50]
gi|398181938|gb|EJM69476.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM50]
Length = 272
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 186 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 245
S G +HN + H+ +V V+D + G +V PYK AVM+ DE+
Sbjct: 18 SLGEKIHNAAYDHLGLEYRFVCFGVEDPAAAVQAIRTLGVRGMNVSMPYKTAVMEHLDEI 77
Query: 246 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 305
AQ I AVNTI DG L GYNTD S+ A+ + I P R+
Sbjct: 78 DEAAQVIGAVNTI--NNVDGVLTGYNTDYLGSLAALREVI-------------DPTDRRV 122
Query: 306 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 365
V+ GAGGA RA+ +G GA V +F+ R + LA + + I +F +
Sbjct: 123 AVI-GAGGAARAVVYGCLQTGAHVTVFNRSAARGRDLAQSL--GIQYGGGIEDFLASEFD 179
Query: 366 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 425
I+ NAT +G T V E L + +V D + P +T L+ A G + VSG M
Sbjct: 180 IVINATSVGFRQPT--VNPLEGRLASHLVVMDVAFIPAQTALIGQARQLGCVTVSGTRML 237
Query: 426 LRQAIGQFNLFTGK-EAPKEFMREIVLAKF 454
+ QA Q L+TG EAP E M +L +
Sbjct: 238 VHQARKQIELYTGHYEAPLEVMEHAMLQEI 267
>gi|291459360|ref|ZP_06598750.1| shikimate dehydrogenase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417959|gb|EFE91678.1| shikimate dehydrogenase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 305
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 28/301 (9%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 222
++ I+ TK+ L+ PV HS P +HN FR + + +Y+ V +DL
Sbjct: 16 QIFEISGSTKLICLLGSPVSHSLSPRIHNGAFRELGLDYVYLAFDVKTEDLTFVLDALRR 75
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
G ++ P K +V+ CD + A+ +VNT++ D ++ G++TD
Sbjct: 76 MGARGLNLTMPLKRSVLPLCDTLSEAAEISESVNTVVF-SEDRRIEGHSTDGS------- 127
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-----DFE 337
G+ G S G G+ VL GAGGAG A+ A G R + + D
Sbjct: 128 ------GFFRGLESEGISYRGKKLVLLGAGGAGTAILVQAALSGVRELSLFVRRGSRDLP 181
Query: 338 RAKSLASDVMGAARPFEDILNF------QPEKGAILANATPLGMHPNTDRVPVSEETLRD 391
R + + + + + +L + + IL NA+ +GM P+ +R + + +
Sbjct: 182 RIRRILASLRKRSSCIFSLLEYGEALYRELSDCDILVNASSVGMAPDKERSLIEDSSFFP 241
Query: 392 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
L V D +Y+PRKT+LL+ AE G V+G+ M L Q F L+ G+E P E +R +
Sbjct: 242 EGLTVADVIYSPRKTKLLRLAEERGLRTVNGLPMLLFQGAEAFRLWCGREMPMENIRRNI 301
Query: 451 L 451
L
Sbjct: 302 L 302
>gi|373500632|ref|ZP_09591009.1| hypothetical protein HMPREF9140_01127 [Prevotella micans F0438]
gi|371952794|gb|EHO70628.1| hypothetical protein HMPREF9140_01127 [Prevotella micans F0438]
Length = 248
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 34/272 (12%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGF 232
+GLI P+GHS N F + N + Y+ +D+L + S S+P G +V
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFANENIDAQYINFEIPSIDNLVEVLS--SNPQLRGLNVTI 61
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERG 289
PYKE V+++ D + P AQAI AVN +IR G L G+N+D +IE + ER
Sbjct: 62 PYKEQVIRYLDSISPEAQAIGAVN-VIRVSQKGNQTFLRGFNSDVIGFTKSIEPLL-ERY 119
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
+ R ++ G GGA +A+ +G KS G + ++
Sbjct: 120 H-------------RKALILGTGGAAKAVDYGLKSLGL----------ETQMVSRSRKTG 156
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLL 408
A ++D+ E+ +L N TPLG++PN D P + + L++D +Y P +T +
Sbjct: 157 AITYDDVKAETIEEYNVLVNCTPLGLYPNVDLCPALPYNAMNSRTLLYDLLYNPDETLFM 216
Query: 409 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
+ GA + +G+EM L QA + + GKE
Sbjct: 217 RKGREQGATVKNGLEMLLLQAFASWEFWNGKE 248
>gi|154505054|ref|ZP_02041792.1| hypothetical protein RUMGNA_02564 [Ruminococcus gnavus ATCC 29149]
gi|153794533|gb|EDN76953.1| shikimate dehydrogenase [Ruminococcus gnavus ATCC 29149]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 36/300 (12%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
IN T F LI PVGHS P ++N +F+ + +Y+ V D ++ S +
Sbjct: 2 EINGRTGFFCLIGSPVGHSGSPAMYNYSFQKTEQDYVYLAFDVDLDKTEEAVSALKALGC 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V P K V + DE+ A+ I A NT++ + DGKL G+NTD
Sbjct: 62 KGVNVTMPCKTKVAELADELSDAAELIGACNTVVVK--DGKLHGHNTD------------ 107
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFE------- 337
G+ G+ + ++ + GAGGA A+ A GA ++ IF+ +
Sbjct: 108 -GIGFVRNLKEHGADVKDKVITVMGAGGAATAIQVQAALEGAKKIYIFNCKDKFYANAEN 166
Query: 338 RAKSLASDVMGAA---RPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 392
A+ + + V G P ED L + ++ IL NAT GM P D + + ++ +
Sbjct: 167 TARKIENKVPGVTVEVYPLEDSQKLYEKIKESDILVNATKSGMKPAEDESLIKDVSV--F 224
Query: 393 Q---LVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Q +V DAVY PR+T+L+++A+AAG I + G+ M L Q F +FTG+ P E + E
Sbjct: 225 QPDFVVADAVYNPRETKLIREAKAAGCKIALGGIGMLLWQGEAAFRIFTGESMPTEEVYE 284
>gi|164688575|ref|ZP_02212603.1| hypothetical protein CLOBAR_02220 [Clostridium bartlettii DSM
16795]
gi|164602988|gb|EDQ96453.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TKV+ +I PV S P +HN F + + +YV V D +K+
Sbjct: 4 ISSKTKVYSVIGHPVSQSFSPKIHNYLFEKYDIDAVYVSYDVNPDRVKEGIEGIRHLGIM 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K VMK+ DE+ A+ AVNTI + DGKL GYNTD +I D
Sbjct: 64 GTNVTIPHKIEVMKYLDEIDKKAKLFGAVNTI--KNVDGKLYGYNTDGTGLTKSIRD--- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
S G + G+ ++ GAGGA R++A A A + I + E+A+ +A
Sbjct: 119 ---------SSGEDIKGKKVLIIGAGGACRSIAIQLAIEEAASIEIVNRSIEKAQIIADT 169
Query: 346 V-----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-DAV 399
+ A + I + IL N TP+GM TD P+ + ++ DAV
Sbjct: 170 INSHFETKAIASSKTITQDDIDNVDILINTTPIGM--GTDESPIDTSLVPPKNMIVADAV 227
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
Y P +T L+K I G++M + Q I F+++TG
Sbjct: 228 YKPHETALIKWGLKYNLKIAYGIQMLINQGIHSFSIWTG 266
>gi|402701993|ref|ZP_10849972.1| shikimate/quinate 5-dehydrogenase [Pseudomonas fragi A22]
Length = 271
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 22/265 (8%)
Query: 191 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 250
+HN + + + +V V+D + + G +V PYK AVM D + A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPHLDAIDESAR 82
Query: 251 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 310
I AVNTI DG L GYNTD +I A+++ R + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAIRALQEVTGLRDKR--------------IAVIG 126
Query: 311 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 370
AGGA RA+ FG ARV +F+ ER +LA D+ AR + F I+ NA
Sbjct: 127 AGGAARAVVFGCLQAAARVTLFNRTAERGTALAEDL--GARWGGSVEAFTASNFDIVINA 184
Query: 371 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 429
T +G P+++ + + L + +V D + P T LL+ A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVHTALLQQAKALGCTTVAGTRMLVHQA 241
Query: 430 IGQFNLFTGKEAPKEFMREIVLAKF 454
Q L+T KEAP + M + +L +
Sbjct: 242 CRQIELYTEKEAPLDIMEQAMLQEI 266
>gi|386319138|ref|YP_006015301.1| shikimate 5-dehydrogenase [Staphylococcus pseudintermedius ED99]
gi|323464309|gb|ADX76462.1| shikimate 5-dehydrogenase [Staphylococcus pseudintermedius ED99]
Length = 270
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 26/284 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS P++H+ F+ +N + Y + + + S + GF+V P
Sbjct: 3 FAVIGHPIDHSLSPLMHHANFKSLNLDYDYEALNIPPTHFEHIRDIISEKELDGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + D++ A+AI AVNT+ + +GK +GYNTD G+ G
Sbjct: 63 HKERIINYLDDMSDEARAIGAVNTV--KVENGKWMGYNTDG-------------TGFVKG 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
L G ++ GAGGA + +A+ ++ R+ + + R S +D +P
Sbjct: 108 LQVKYGDLTGAHILILGAGGASKGIAYALSQVSDKRIAVAN----RTMSRFNDWQLQIQP 163
Query: 353 --FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
ED+ + + I+ N TPLGMH + D V +S L+ LV D +Y P +T LK+
Sbjct: 164 HSLEDVASI-AHQFDIIINTTPLGMHQSQDSV-MSFAQLKADVLVCDIIYIPFQTTFLKE 221
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A +G++MF+ Q F ++TG E+ MR VL K
Sbjct: 222 AAEKEFSTYNGLDMFIYQGAESFKIWTGLESDITTMRNAVLNKL 265
>gi|164688249|ref|ZP_02212277.1| hypothetical protein CLOBAR_01894 [Clostridium bartlettii DSM
16795]
gi|164602662|gb|EDQ96127.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 290
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
E I T++ GLI+ P+ HS P +HN F + + Y+ V ++L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPRMHNEAFAKLGLDYAYLAFEVGNEELEDTIKGFRAMK 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ D++ A+ AVNTI+ DG L G+ I D
Sbjct: 63 VRGSNVSMPNKTVVHKYLDKLSDAAEMCGAVNTIVN--DDGVLTGH----------ITDG 110
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 340
I GY +G G + G+ + GAGGA A+ A G + + IF D +ERA+
Sbjct: 111 I---GYMSGLKDAGIDIIGKKMTIVGAGGAATAIQVQAALDGVKEISIFNRKDEFYERAQ 167
Query: 341 SLASDV------MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRD 391
D+ ED+ + E + I NAT +GM P + + +++ LR+
Sbjct: 168 KTVKDINEKTNCKATLYDLEDLDKLKEEIASSYIFTNATGMGMKPLEGQTYIPDKSFLRE 227
Query: 392 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V D VY P +T LLK A+ G ++G M L Q F L+T ++ P E ++E++
Sbjct: 228 DLIVTDVVYAPAETALLKMAKEVGCKTLNGFPMMLFQGAAAFKLWTNQDMPIEHVKEVM 286
>gi|418967470|ref|ZP_13519133.1| shikimate dehydrogenase [Streptococcus mitis SK616]
gi|383344083|gb|EID22253.1| shikimate dehydrogenase [Streptococcus mitis SK616]
Length = 284
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 139/307 (45%), Gaps = 55/307 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--HGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 349
SF + G L GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TITGEKMTLLGAGGAAKSILAQAILDGVSQISVF---------VRSSSMEK 160
Query: 350 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEE 387
RP+ ED+ Q + +L NAT +GM + VP V E
Sbjct: 161 TRPYLNKLQEQTGFKVGLYALEDVSELQASIAESDLLVNATSVGMDGQSSPVPENIVLPE 220
Query: 388 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
TL LV D +Y P +T LK A + G ++G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYQPFETPFLKWARSQGNPAINGLGMLLYQAAAAFQLWTGKEMPTEEIW 276
Query: 448 EIVLAKF 454
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|319892653|ref|YP_004149528.1| shikimate 5-dehydrogenase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162349|gb|ADV05892.1| Shikimate 5-dehydrogenase I alpha [Staphylococcus pseudintermedius
HKU10-03]
Length = 270
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 26/284 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 233
F +I P+ HS P++H+ F+ +N + Y + + + S + GF+V P
Sbjct: 3 FAVIGHPIDHSLSPLMHHANFKSLNLDYDYEALNIPPTHFEHIRDIISEKELDGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+KE ++ + D++ A+AI AVNT+ + +GK +GYNTD G+ G
Sbjct: 63 HKERIINYLDDMSDEARAIGAVNTV--KVENGKWMGYNTDG-------------TGFVKG 107
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 352
L G ++ GAGGA + +A+ ++ R+ + + R S +D +P
Sbjct: 108 LQVKYGDLTGAHILILGAGGASKGIAYALSQVSDKRIAVAN----RTMSRFNDWQLQIQP 163
Query: 353 --FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
ED+ + + I+ N TPLGMH + D V +S L+ LV D +Y P +T LK+
Sbjct: 164 HSLEDVASI-AHQFDIIINTTPLGMHQSQDSV-MSFAQLKADVLVCDIIYIPFQTTFLKE 221
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A +G++MF+ Q F ++TG E+ MR VL K
Sbjct: 222 AAEKEFSTYNGLDMFIYQGAESFKIWTGLESDITTMRNAVLNKL 265
>gi|326789797|ref|YP_004307618.1| shikimate 5-dehydrogenase [Clostridium lentocellum DSM 5427]
gi|326540561|gb|ADZ82420.1| shikimate 5-dehydrogenase [Clostridium lentocellum DSM 5427]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 133/282 (47%), Gaps = 25/282 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
I+ T++ L+ PV HS P +HN + YV V+D ++ +
Sbjct: 3 ISGTTQLACLLGHPVSHSFSPYIHNYLAEKCGLDMRYVCFDVEDEQVEAAVKGIRALGIV 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYK VM + DE+ P A I AVNTI + +GKLIGYNTD + ++ +A
Sbjct: 63 GSNVTIPYKIKVMDYLDEIDPNAAIIGAVNTI--KNENGKLIGYNTDGVGFVKSVIEA-- 118
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
G L G+ ++ GAGGA RA+ + G + ++I + +A+ L++
Sbjct: 119 -----------GHTLKGKTVMVLGAGGASRAITVELAAAGVKKLLICNNTLAKAEQLSAQ 167
Query: 346 V------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-DA 398
+ + +I + L N TP+GM P++E LV D
Sbjct: 168 IKEHFAEVSIQIGLLNITEADLQGVDFLINTTPVGMSKQKALCPINETIQPPKGLVVCDI 227
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
VYTP T+LL A+ G +V G+ M + QA+ F L+TGKE
Sbjct: 228 VYTPHDTKLLLWAKVNGLQVVHGIGMLINQAVHSFYLWTGKE 269
>gi|312865146|ref|ZP_07725374.1| shikimate dehydrogenase [Streptococcus downei F0415]
gi|311099257|gb|EFQ57473.1| shikimate dehydrogenase [Streptococcus downei F0415]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ ++++P+ HS P +HN F NG+YV + +DL++ D
Sbjct: 2 QIDGHTRMAAVVARPIRHSISPFIHNYAFDASGINGVYVAWDIPEEDLEESVQNVRRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G ++ PYK+ V+ F DE+ A+ I AVNT++ R G+LIGYNTD A+E
Sbjct: 62 FGINISMPYKQVVIPFLDELDQAAELIGAVNTVVNR--QGRLIGYNTDGYGFFKALE--- 116
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD----IDFERAK 340
K+ G+ +AG+ + G GGA +L A GA+ + IF+ ++ AK
Sbjct: 117 KDDGFT---------IAGKTMTILGGGGAATSLIVQAALDGAKKINIFNQTQFLEETEAK 167
Query: 341 SL----ASDVMGAARPFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 394
+ A+ V P E D++ + + +L NAT +GM + V + L
Sbjct: 168 AQKYEEATGVTLEVFPVENQDLIQEKILESQLLVNATSVGMDGKS-MVLADDTELPAGLR 226
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 444
V D +Y P +T L A + G +G+ M L QA F L+TG + P +
Sbjct: 227 VADTIYQPFETSFLAYARSKGLKASNGLGMLLYQAAKSFQLWTGSQMPTD 276
>gi|373464004|ref|ZP_09555572.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
gi|371763400|gb|EHO51877.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 31/288 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ TK+FGL++ P HS P++HN +F+ NG Y+ V D L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFKITGINGAYLAFDVTSDGLADSLAAMRAMGIG 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P K V+ DEV P A+ + AVNT+I R +G L G +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVIPLLDEVTPRAERLQAVNTVINR--NGHLTGDSTDGQGFV----DALK 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
+R + LAG + GAGGAGR++ A G ++ +F + +
Sbjct: 116 QRAIE---------LAGATLTVLGAGGAGRSIISAAVDAGVTKIHVFKRNNASFMPVKHQ 166
Query: 346 VMGAARPFEDILNFQPEKGAILA--------NATPLGMHPNTDRVPVSEETLRDYQ---L 394
+ + E + ++ E I A NAT LGM +++ +P+++ + ++ +
Sbjct: 167 LEAWSTAIE-VTDYDDEAAMIHAVDTSQIVVNATNLGMAADSE-LPINQAVIDHFKPEHV 224
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
V D +Y P T L A+ G+ +G+ M + QA G F +TG++ P
Sbjct: 225 VVDVIYFPLTTPFLVAAKKRGSHTYNGIGMLVHQAAGSFLEWTGQKMP 272
>gi|449541458|gb|EMD32442.1| hypothetical protein CERSUDRAFT_161831 [Ceriporiopsis subvermispora
B]
Length = 1621
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 197/469 (42%), Gaps = 44/469 (9%)
Query: 12 GGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 70
GG + D K L H A LG +YVD E+ + + Q + G IV+ D
Sbjct: 1170 GGQFPDDAEKEAFTLFHTAIRLGVEYVDVEITWSEKSI--QDLVVRKGHSQIVASWHDWS 1227
Query: 71 TPSEEDLGYLVS---RMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYS 122
D G +V R+ DI+KLV N++ + +++ + + PIIA +
Sbjct: 1228 GNMAWD-GKVVEAKYRIAHAFGDIVKLVGKANELDDSLALYRFVQRMRASSDAKPIIAIN 1286
Query: 123 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLIS 180
+G G +S++L+ F+ S P P S Q ++ + F L
Sbjct: 1287 MGTEGQLSRILNSTFSPV----SHPLLPSKAAPGQLSFAQIQTALNLIGQLPARRFFLFG 1342
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
P+ HS P LHN F + Y + + + + +T +S DF G SV P+K V+
Sbjct: 1343 NPIKHSMSPTLHNTGFEILGLPHKYELLETETIGEIKATLASSDFGGASVTIPFKLDVLP 1402
Query: 241 FCDEVHPLAQAIAAVNTII-RRPSDGKLIGY--NTDCEASITAIEDAIKERGYKNGTASF 297
D + P A+AI AVNTII +R +DG I Y NTD +I A+ S
Sbjct: 1403 LLDALSPEAEAIGAVNTIIPQRKADGSCILYGDNTDWLGISRSIRTAMP--------TSM 1454
Query: 298 GSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFEDI 356
P A ++ GAGG RA + G R+ +F+ A+ LA+ +
Sbjct: 1455 KHPEAA---LVIGAGGTSRAAIYALHKLGVQRIYLFNRTRRSAEVLANAFPDVEVEILET 1511
Query: 357 LNFQPEKG---AILANATPLGMHP------NTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L P G I+ + P N +P+S +V D Y P +T L
Sbjct: 1512 LGTWPAGGPAPTIIVSTVPASATTTDPSVKNALYLPISMFESATGGVVVDMAYKPAETPL 1571
Query: 408 LKDAEAAG--AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L AE G V GV++ L Q QF L+TG+ PK + E V + +
Sbjct: 1572 LALAENQGDQWKTVKGVQVLLEQGYEQFQLWTGRRCPKATVAERVWSAY 1620
>gi|229918236|ref|YP_002886882.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
gi|259585281|sp|C4L3U2.1|AROE_EXISA RecName: Full=Shikimate dehydrogenase
gi|229469665|gb|ACQ71437.1| shikimate 5-dehydrogenase [Exiguobacterium sp. AT1b]
Length = 261
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 127/265 (47%), Gaps = 26/265 (9%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
+I P+ HS P LH R G Y + D L F+ D+ GF+V P
Sbjct: 3 LAVIGHPIAHSLSPQLHEQWLRASGLFGRYEAIDATPDQLPALFAAMREGDWDGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE V+++ D++ A+ AVNT+ +R DG+LIG NTD + A+ RG+
Sbjct: 63 YKEVVVRYLDDLDEAAKHAGAVNTVYKR--DGRLIGTNTDGAGLVQALMPYTDFRGH--- 117
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 353
++ GAGGA R + +R V I + ERAK+LA D G
Sbjct: 118 ------------VLIVGAGGAARGIVQALPTRD--VTIVNRTVERAKALA-DTFGVVYTT 162
Query: 354 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 413
D ++ + ++ T +GM + P+S E LR +V D +Y P T +L++A++
Sbjct: 163 FDEMDVS--RYDVIIQTTSVGMDERS--TPLSLEGLRQNTVVCDIIYRPLVTPMLQEAKS 218
Query: 414 AGAIIVSGVEMFLRQAIGQFNLFTG 438
GA IV+GV MF+ Q F +TG
Sbjct: 219 RGANIVTGVAMFVGQGALSFEKWTG 243
>gi|258563398|ref|XP_002582444.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
gi|327507674|sp|C4JYG6.1|ARO1_UNCRE RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|237907951|gb|EEP82352.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
Length = 1580
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 198/475 (41%), Gaps = 69/475 (14%)
Query: 7 RPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 65
R K GG + D H L+ LA +G+++VD E+ +L + + G I++
Sbjct: 1113 RTKSQGGRFPDDAHNAALDLYRLAIRMGSEFVDLEVTFPEYVL--RAVTEMKGVSKIIAS 1170
Query: 66 NLDCETPSEEDLGYLVS--RMQATGADIIKLVFSVNDITE-IA----RIFQLLSHCQVPI 118
+ D G DIIKLV + + + IA +I+ +H +P+
Sbjct: 1171 HHDVANRLSWRNGSWTQFYNKALQYGDIIKLVGIASQLDDNIALREFKIWAKKAH-DIPV 1229
Query: 119 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVF 176
IA ++GERG +S++L NG + S P P S ++ + + ++K F
Sbjct: 1230 IAINMGERGRLSRIL----NGFMTPVSHPKLPFKAAPGQLSAKEIREGLSLMGEIESKKF 1285
Query: 177 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 236
++ KP+ S+ P LHN F V +Y + DD++ +PDF G S+ P K
Sbjct: 1286 AIVGKPISASRSPALHNALFADVGLPHVYGRLETDDVQNVKDLIHAPDFGGASITIPLKL 1345
Query: 237 AVMKFCDEVHPLAQAIAAVNTII---RRPSDGK----LIGYNTDCEASITAIEDAIKERG 289
+M DE+ P A+ I AVNTI+ R P D K LIGYNTD + + + G
Sbjct: 1346 DIMPLLDEIAPEAKVIGAVNTIVPAPREPGDVKKGPRLIGYNTDWQGMVQCL-----RHG 1400
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
++ P G ++ G GG RA S G + R++S +D+
Sbjct: 1401 GAVSPSTSNDPAPG---LVIGGGGTARAAIHALHSMGYSPIYL---VGRSESKLNDM--- 1451
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNT--------------------------DRVP 383
A F N Q IL +A L + P+ R+
Sbjct: 1452 ALSFPATYNLQ-----ILKDAESLEILPSVAIGTIPGDQPIDPSMREVLCRLFEMAARID 1506
Query: 384 VSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
+ L +++ + Y P T L + A G + G+E + Q + QF L+TG
Sbjct: 1507 AELKELAPKRVLLEMAYKPTVTPLSQLASDCGWATIPGLEALVGQGVYQFQLWTG 1561
>gi|322420004|ref|YP_004199227.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
gi|320126391|gb|ADW13951.1| shikimate 5-dehydrogenase [Geobacter sp. M18]
Length = 290
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 138/292 (47%), Gaps = 30/292 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T V G+I PV HS P+LHN F+ + + IYVP + + L + + A
Sbjct: 3 ITGKTTVTGIIGWPVSHSLSPVLHNAAFKALGLDWIYVPFPIAPERLAEGICGLKAIGVA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K A++ DEV P A+ I AVNT++ + G+L GYNTD I A+
Sbjct: 63 GFSVTIPHKVAIIPLLDEVTPEAELIGAVNTVVAK--HGRLTGYNTDGIGLIAAL----- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
A G+ ++ GAGGA R+ G ARV I + A +LA
Sbjct: 116 -------AAKLDCDPKGKSVLVLGAGGAARSAVVSLAGAGAARVEIANRSLAAATALADL 168
Query: 346 VMG-------AARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLV 395
V G AARP +L+ G+ ++ N T +GM D P +S + L+ +
Sbjct: 169 VEGRLPQTSFAARPL-SVLSDAGFLGSFDLVVNTTSVGMA--GDSFPGLSLKALKSGACI 225
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
+D VY P T LL AEA G +G+ M + Q F ++TG P+ M
Sbjct: 226 YDMVYAPPVTPLLAQAEALGIPCANGLGMLVAQGEAAFRIWTGATPPQGCME 277
>gi|340344441|ref|ZP_08667573.1| Shikimate dehydrogenase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519582|gb|EGP93305.1| Shikimate dehydrogenase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 273
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 24/286 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+K F +I P+ HS P +H+ FR +N + Y+ + D+L++ + +GF+V
Sbjct: 2 SKTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYKIAKDELEEGIESLKKIKISGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +MK+ D++ I AVNT+ +G L GYNTD + + + K+R
Sbjct: 62 TIPHKVEMMKYLDKLDESCSIIGAVNTVTN--DNGILKGYNTDMDGFL----EPFKKRNL 115
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSL---ASDV 346
+ +L GAGGA RA+ G AK + I + E A + A+ +
Sbjct: 116 N---------IRNLKVLLLGAGGAARAIVVGFAKEHAKSITIANRTLENANKISEFANKI 166
Query: 347 MGAARPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A P D + + ++ NAT +G+ + +S + + +V+D VY+P T
Sbjct: 167 GLKANPIRIDEIGETTKNYDVIVNATSVGLK--NEPSIISLDGINSKTIVYDIVYSPINT 224
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+K A+ GAI++ G EM L QA F ++ G EAP M++ +L
Sbjct: 225 DFIKKAKEKGAIVIYGYEMLLGQASRAFQIWHGVEAPYNAMKKALL 270
>gi|168493278|ref|ZP_02717421.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC3059-06]
gi|418074201|ref|ZP_12711455.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11184]
gi|418078817|ref|ZP_12716040.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 4027-06]
gi|418080792|ref|ZP_12718004.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6735-05]
gi|418089729|ref|ZP_12726885.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43265]
gi|418098704|ref|ZP_12735803.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6901-05]
gi|418105424|ref|ZP_12742481.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44500]
gi|418114904|ref|ZP_12751891.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 5787-06]
gi|418117060|ref|ZP_12754030.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6963-05]
gi|418135395|ref|ZP_12772250.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11426]
gi|418173718|ref|ZP_12810331.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41277]
gi|418216783|ref|ZP_12843506.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
Netherlands15B-37]
gi|419434453|ref|ZP_13974570.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40183]
gi|419440558|ref|ZP_13980606.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40410]
gi|419464788|ref|ZP_14004680.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA04175]
gi|419469192|ref|ZP_14009062.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA06083]
gi|419497749|ref|ZP_14037457.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47522]
gi|419534829|ref|ZP_14074330.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17457]
gi|421309784|ref|ZP_15760410.1| shikimate dehydrogenase [Streptococcus pneumoniae GA62681]
gi|183576529|gb|EDT97057.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CDC3059-06]
gi|353748008|gb|EHD28664.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 4027-06]
gi|353749261|gb|EHD29910.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11184]
gi|353753332|gb|EHD33956.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6735-05]
gi|353761727|gb|EHD42293.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA43265]
gi|353770064|gb|EHD50580.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6901-05]
gi|353776360|gb|EHD56836.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA44500]
gi|353785969|gb|EHD66385.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 5787-06]
gi|353789421|gb|EHD69816.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 6963-05]
gi|353838535|gb|EHE18613.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41277]
gi|353872375|gb|EHE52241.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae
Netherlands15B-37]
gi|353901113|gb|EHE76659.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA11426]
gi|379537822|gb|EHZ03004.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA04175]
gi|379545131|gb|EHZ10272.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA06083]
gi|379564177|gb|EHZ29174.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA17457]
gi|379575837|gb|EHZ40767.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40183]
gi|379578698|gb|EHZ43607.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA40410]
gi|379600013|gb|EHZ64795.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47522]
gi|395910371|gb|EJH21244.1| shikimate dehydrogenase [Streptococcus pneumoniae GA62681]
Length = 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLTAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKCLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|399994630|ref|YP_006574870.1| shikimate dehydrogenase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659185|gb|AFO93151.1| shikimate dehydrogenase AroE [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 277
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 132/275 (48%), Gaps = 21/275 (7%)
Query: 172 DTKV--FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAG 227
DT++ G+I PV HS+ P++H R G YVP+ V+ L++ + F G
Sbjct: 3 DTRIPLAGVIGSPVAHSRSPLVHGHWLRTYGIAGHYVPLHVEPGQLEEVVRSLPKMGFVG 62
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
++ P+KE +M+ D+V A I A NT+I RP DG ++ NTD IT + A +
Sbjct: 63 ANITIPHKEQIMEIADQVTDRATLIGAANTLIFRP-DGSILADNTDGYGFITNLHQAAPD 121
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDV 346
G A V+ GAGGA RA+ G +++ + ERA S+
Sbjct: 122 WDPATGPA-----------VVFGAGGASRAVIASLLEAGVPEILLSNRTRERADQFRSE- 169
Query: 347 MGAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
G+ D + E+ A+L N T LGM R+ V + LR +V D VYTP K
Sbjct: 170 FGSRIQVVDWVQVGNVIEQAALLVNTTSLGM-VGKPRLRVPLDGLRSSTVVTDLVYTPLK 228
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 439
T +L+ AE G V G+ M L QA+ F + GK
Sbjct: 229 TDMLQWAEDIGCTTVDGLGMLLHQAVPGFERWFGK 263
>gi|159041378|ref|YP_001540630.1| shikimate dehydrogenase [Caldivirga maquilingensis IC-167]
gi|229488304|sp|A8MCY4.1|AROE_CALMQ RecName: Full=Shikimate dehydrogenase
gi|157920213|gb|ABW01640.1| Shikimate dehydrogenase substrate binding domain protein
[Caldivirga maquilingensis IC-167]
Length = 269
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 27/269 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKF-FSTYSSPDFAGFSVGFP 233
VFGLI P+ ++ P +HN F+ + + YVP+ V + F +S +GF+V P
Sbjct: 3 VFGLIGYPLNYTLSPQIHNYVFKRLRIDAAYVPLRVASKRLLHFIEFSRDALSGFNVTIP 62
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
+K AV K DE++ A I +VNT++ S+ KLIGYNTD A+E+++ ERGYK
Sbjct: 63 HKVAVAKLIDELNDDADTIKSVNTVVN--SNQKLIGYNTD----YVAVEESLIERGYK-- 114
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA--SDVMGAA 350
G +L GAGGA RA+ G R + + + ERA L ++ +G
Sbjct: 115 ---------GEEALLIGAGGAARAVVLALSKTGCRAIKVLNRSRERAVELCGLANGLGLD 165
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR-KTRLLK 409
DI K ++ NATPL +++ + L+ D Y P +T L+K
Sbjct: 166 CSVVDI-GGNYGKPHVIINATPL----SSEEYWLLNLGELGTMLLLDMAYKPNTETDLIK 220
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTG 438
A G ++ GVE+ +RQA+ L+ G
Sbjct: 221 RARELGIQVIDGVEILVRQALAADKLWLG 249
>gi|304392715|ref|ZP_07374655.1| shikimate 5-dehydrogenase [Ahrensia sp. R2A130]
gi|303295345|gb|EFL89705.1| shikimate 5-dehydrogenase [Ahrensia sp. R2A130]
Length = 278
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 171 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGF 228
A+TK +I P+ HS+ P++H +H G Y+ V ++L FF+ + +F G
Sbjct: 2 AETKRAFVIGHPISHSRSPLVHGMWLQHHALEGTYIAHDVSPENLLAFFNRIRAGEFVGG 61
Query: 229 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 288
++ P+KE ++ DEV A+ + A+NT+ +L+G NTD E + ++D +
Sbjct: 62 NITLPHKETALELVDEVDDTARRLGAINTVWMEGD--RLLGTNTDGEGFLANLDD--RHP 117
Query: 289 GYKNGTASFGSPLAGRMFVLA-GAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDV 346
G+ +P R L GAGGA RA+ G RG RV + + R +++A +
Sbjct: 118 GWD-------APARLRAGALVLGAGGASRAIVMGLADRGFQRVTVANRTVARGEAIAEEF 170
Query: 347 MGAARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
G P + I + KG ++ N T LGM + +P+ LV DAVYTP
Sbjct: 171 GG---PCDTISIDEASKGGDYGLIVNTTSLGM--GGEGMPIDPALFPRSTLVTDAVYTPL 225
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAPKEFMREIVLAKF 454
T LL A+AAG V G+ M L QA+ F + G + +RE VLA
Sbjct: 226 MTPLLLAAKAAGQPTVDGLGMLLYQAVPGFERWFGIRPTVTNRIRETVLATM 277
>gi|159904382|ref|YP_001551726.1| shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
MIT 9211]
gi|159889558|gb|ABX09772.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
MIT 9211]
Length = 300
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 40/306 (13%)
Query: 165 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSS 222
K I T + G+I P+ HS P++ N +N + Y +P D+L+ S
Sbjct: 5 KFSSITGKTSLVGVIGDPISHSLSPVIQNAALHKMNLDWCYLAIPCKPDNLESIIKCLSK 64
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
+ G ++ P+K +KFC+ V +A + A+NT+I DG IG NTD +E
Sbjct: 65 INCKGLNITIPHKTNALKFCNHVSEIATKVGAINTLIPDNDDG-WIGTNTD-------VE 116
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKS 341
+K G + S R V+ G GG+ RA+ G K + A + I + S
Sbjct: 117 GFLKPLGLEKNWES-------RNAVILGNGGSARAVLLGLEKLKLAEIAIIG---RKETS 166
Query: 342 LASDVMGAARPFEDI---------LNFQPEKGAILANATPLGMHPNTD------RVPVSE 386
+ + + P +I LN + ++ N TP+GM + +P E
Sbjct: 167 ITNLINSLTSPNGNIKGLTQDSLQLNEYIKNADLIINTTPIGMLQTNNTSCIDSEIPFGE 226
Query: 387 ---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAP 442
+ L+ ++D +Y PR T+ L+ + G I + G+EM ++Q L++G +E P
Sbjct: 227 KIWDNLKPKTTLYDLIYNPRPTKWLEIGKEKGCIPIDGLEMLIQQGAASLRLWSGIEEIP 286
Query: 443 KEFMRE 448
+ MR+
Sbjct: 287 IDIMRK 292
>gi|354611961|ref|ZP_09029913.1| Shikimate dehydrogenase [Halobacterium sp. DL1]
gi|353191539|gb|EHB57045.1| Shikimate dehydrogenase [Halobacterium sp. DL1]
Length = 265
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV---PMFVDDLKKFFSTYSSPDFAGFSV 230
+VFGL+ PV HS P +H + + + YV P D + G +V
Sbjct: 2 QVFGLVGSPVEHSLSPPMHEAAYEELGMDARYVTFEPARADLEAALAGAEALG-IDGLNV 60
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K+AV D V LA + AVNT+ +D G+NTD G
Sbjct: 61 TIPFKQAVRDLVD-VDDLAARVGAVNTVDFSGTDPT--GHNTDVA-------------GV 104
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ LAGR V+ GAGGAGRA F GA V I + A+ LA++V G+
Sbjct: 105 QRAFGHHDVELAGRDAVVVGAGGAGRAAVFALADAGADVSIANRTVATAEELAAEVYGSG 164
Query: 351 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 410
P +D+ + +L NAT +GM D PV + L V DAVYTP +TRLL+D
Sbjct: 165 HPLDDLSTLLADAD-VLVNATSVGM--EEDESPVPADALHADLAVLDAVYTPLRTRLLQD 221
Query: 411 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
A AGA V G M L Q + F L+TG++AP + M + A+
Sbjct: 222 AAGAGATTVDGAWMLLYQGVAAFELWTGRDAPVDAMNRALRARL 265
>gi|289422437|ref|ZP_06424280.1| shikimate dehydrogenase [Peptostreptococcus anaerobius 653-L]
gi|289157009|gb|EFD05631.1| shikimate dehydrogenase [Peptostreptococcus anaerobius 653-L]
Length = 483
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 34/293 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTY---------SS 222
K FGL+ + + HS P +H ++ +N N Y + +DL+ + SS
Sbjct: 2 KHFGLLGEHLSHSISPQIHQYIYQKLNINADYSLIEFPREDLESIIKSLYRSSMSGPISS 61
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
P +G +V PYK+ V+ D + LA++I ++NTI + + GKL GYNTD ++E
Sbjct: 62 P-MSGINVTIPYKKDVIPLLDNIDDLARSIGSINTI--KINQGKLSGYNTDYYGIQASLE 118
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKS 341
D + PL F++ G GGA L + GA ++ I + ++
Sbjct: 119 DYL--------------PLKSSTFLILGYGGACLPLIAYLLNEGAEKIYIASRNPQKGID 164
Query: 342 LASDVMGAARPFEDIL-----NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
+MG DI KG I+ N TPLGM PN D+ +S+E +++ +
Sbjct: 165 DLESIMGPENTRPDIEFVGYDQLDKIKGKIVFNTTPLGMFPNLDQSALSKEIFKNFDIAV 224
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
D +Y P +T+ L+DA +G +G++M + QAI ++ + K+ +I
Sbjct: 225 DLIYNPCETKFLRDARRSGLKCQNGLKMLVYQAIRAVEIWNNIQIDKDTASDI 277
>gi|323345648|ref|ZP_08085871.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
gi|323093762|gb|EFZ36340.1| shikimate dehydrogenase [Prevotella oralis ATCC 33269]
Length = 248
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 234
+GLI P+GHS N F + + Y+ + D+K F S+ D G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFENEGIDAKYINFEIPDIKDFPEILASNTDLKGLNVTIPY 63
Query: 235 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIKERGYKN 292
KE V+ + D + P A+AI AVN I GK++ G+N+D +IE I E +K
Sbjct: 64 KEKVIDYLDSLSPEAKAIGAVNVIRVTHKGGKIVLKGFNSDVIGFTKSIE-PILESYHKK 122
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 352
++ G GGA +A+ +G KS G + ++S + A
Sbjct: 123 A-------------LILGTGGASKAIDYGLKSLGLETLF------ASRSNKPN----AIQ 159
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDA 411
++DI ++ ++ N TPLGM+P+ D P + ET+ ++ L++D +Y P +T +K
Sbjct: 160 YKDITADTVKEYNVIVNCTPLGMYPHADSCPQLPYETMDNHTLLYDLIYNPDETLFMKKG 219
Query: 412 EAAGAIIVSGVEMFLRQAIGQFNLFTGKE 440
GA + +G+EM L QA + + G E
Sbjct: 220 LEHGATVKNGLEMLLLQAFASWEFWHGTE 248
>gi|149011611|ref|ZP_01832807.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SP19-BS75]
gi|182684336|ref|YP_001836083.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae CGSP14]
gi|303254532|ref|ZP_07340636.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae BS455]
gi|303258971|ref|ZP_07344950.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP-BS293]
gi|303261655|ref|ZP_07347602.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP14-BS292]
gi|303264324|ref|ZP_07350244.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS397]
gi|303265877|ref|ZP_07351774.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS457]
gi|303268210|ref|ZP_07354009.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS458]
gi|387759530|ref|YP_006066508.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV200]
gi|418087062|ref|ZP_12724232.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47033]
gi|418139700|ref|ZP_12776526.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13338]
gi|418180730|ref|ZP_12817300.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41688]
gi|419455743|ref|ZP_13995701.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP04]
gi|419514897|ref|ZP_14054522.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae England14-9]
gi|421206822|ref|ZP_15663876.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2090008]
gi|421229997|ref|ZP_15686664.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2061376]
gi|421285238|ref|ZP_15736015.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA60190]
gi|421292268|ref|ZP_15743003.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA56348]
gi|421296213|ref|ZP_15746924.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58581]
gi|421312200|ref|ZP_15762803.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58981]
gi|238691168|sp|B2IQJ4.1|AROE_STRPS RecName: Full=Shikimate dehydrogenase
gi|73915778|gb|AAZ92757.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915780|gb|AAZ92758.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915788|gb|AAZ92762.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915852|gb|AAZ92794.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915856|gb|AAZ92796.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|147764042|gb|EDK70974.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SP19-BS75]
gi|182629670|gb|ACB90618.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae CGSP14]
gi|301802119|emb|CBW34855.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae INV200]
gi|302598500|gb|EFL65542.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae BS455]
gi|302637235|gb|EFL67723.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP14-BS292]
gi|302639914|gb|EFL70370.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae
SP-BS293]
gi|302642289|gb|EFL72637.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS458]
gi|302644612|gb|EFL74862.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS457]
gi|302646136|gb|EFL76363.1| shikimate/quinate 5-dehydrogenase [Streptococcus pneumoniae BS397]
gi|353759323|gb|EHD39909.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47033]
gi|353845432|gb|EHE25474.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA41688]
gi|353905173|gb|EHE80612.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13338]
gi|379628877|gb|EHZ93479.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP04]
gi|379635446|gb|EIA00005.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae England14-9]
gi|395575097|gb|EJG35668.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2090008]
gi|395594529|gb|EJG54765.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2061376]
gi|395887217|gb|EJG98232.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA60190]
gi|395892396|gb|EJH03387.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA56348]
gi|395896086|gb|EJH07054.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58581]
gi|395910629|gb|EJH21501.1| shikimate dehydrogenase 15 [Streptococcus pneumoniae GA58981]
Length = 284
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKCLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|392586617|gb|EIW75953.1| Pentafunctional AroM protein [Coniophora puteana RWD-64-598 SS2]
Length = 1637
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 199/466 (42%), Gaps = 44/466 (9%)
Query: 12 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 71
G +G E + E L LA G +YVD E+ + + + G IV+ D
Sbjct: 1189 GAFPDGAEKEAFELLELAVKNGVEYVDVEITFDQQRIKELATRAHRGHSQIVASFHDWSG 1248
Query: 72 PSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 124
+ + + + +DI+K+V N++ + +F+ +S + PIIA ++G
Sbjct: 1249 SMKWSEALVKDKYKVASELSDIVKIVGKANELKDNFALFEFVSRVEAQPGAKPIIAINMG 1308
Query: 125 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKP 182
G +S++L N L + P P S Q + H+ + F L P
Sbjct: 1309 AEGQLSRVL----NRTLTPVTHPLLPSKAAPGQLSFAQIQQALHLAGQLPARRFFLFGTP 1364
Query: 183 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKF 241
+ S P LHN F + Y + D+ ++ +T +SPDF G SV P+K VM
Sbjct: 1365 ISQSPSPTLHNTGFATLGLPHQYDLLETSDVGEQIRATLASPDFGGASVTIPHKLDVMPL 1424
Query: 242 CDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTAS 296
D + P A+AI AVNTII S+G L+G NTD + I E+
Sbjct: 1425 LDRLTPAAEAIGAVNTIIPT-SEGASGARILVGDNTDW----LGMRACILEKQP------ 1473
Query: 297 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFED 355
S A ++ GAGG RA + +S GA R+ + + +A++L A +
Sbjct: 1474 --SLAAPAAALVIGAGGTARAAIYALQSLGAKRIYVHNRTAAKAQALVDAFPNARVEVVE 1531
Query: 356 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ----LVFDAVYTPRKTRLLKDA 411
L P A + + P + ETL D +V D Y P +T LL A
Sbjct: 1532 RLGAWPGD----APSVIISTVPASAGAAGLPETLFDKAVARGIVVDMAYKPAETPLLALA 1587
Query: 412 EAAGA---IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ + VSGVE+ L Q QF +TG++APK ++ VL +
Sbjct: 1588 RSVASQSWATVSGVEVLLAQGYEQFERWTGRKAPKGVVQRAVLEMY 1633
>gi|308069993|ref|YP_003871598.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305859272|gb|ADM71060.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 289
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRAMHFRGVNVTI 74
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + R K
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV---------RSLKE 123
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 351
T+ L G + GAGGA R + + + V+I + ++A+ LA + A
Sbjct: 124 ETSV---DLKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAI 180
Query: 352 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
P N + +L N T +GM P + +P+ + + +V D +Y P +TRL
Sbjct: 181 PVRGYSNEDAKSVLATVNVLINTTSVGMSPLSGELPLEASLIPEGIIVSDLIYNPLETRL 240
Query: 408 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L+++ E G + G+ MF+ Q F FTG E MR VL+
Sbjct: 241 LRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVVPAVEQMRAAVLSSL 288
>gi|328857285|gb|EGG06402.1| hypothetical protein MELLADRAFT_74837 [Melampsora larici-populina
98AG31]
Length = 1581
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 39/449 (8%)
Query: 16 EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 75
+G E + E L L G +YVD EL + ++ +Q + + G ++ D
Sbjct: 1152 QGSEKEYFELLELGLRTGCEYVDVELGHSPELI-RQLGAKK-GHSLLIGSYHDFAGKLSW 1209
Query: 76 DLGYLVSRMQATG--ADIIKLVFSVNDITE-IARIFQLLSHCQV---PIIAYSVGERGLV 129
+ + S+ QA ADI+KLV + + +A + +H P+I ++G G +
Sbjct: 1210 NSKEMESKYQAIRKYADIVKLVTVAKSMDDNLALLNFRATHSSTSFPPLITINMGLEGQM 1269
Query: 130 SQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV--EHINADTKVFGLISKPVGHSK 187
S++LSP + L + L G T ++Q + +H ++ F L P+GHS+
Sbjct: 1270 SRILSPVLS-PLTHELLPEPAAPGQLTYNQIQQALDLLGQH---PSRQFWLFGNPIGHSR 1325
Query: 188 GPILHNPTFRHVNYNG-IYVPMFVDDLKK--FFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
P++HN +F ++ +Y PM D L K + +PDF G SV P K V+ DE
Sbjct: 1326 SPLMHNTSFEALSLRSHVYSPMETDTLDKESVKAVLRAPDFGGASVTIPLKLEVLSLMDE 1385
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
+ A+ + AVNTIIRR KLIG NTD A T I ++ TA
Sbjct: 1386 LTDEAREVGAVNTIIRR--GDKLIGDNTDWYAIATLIRRSLPADPTVRATA--------- 1434
Query: 305 MFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSL--ASDVMGAARPFEDILNFQP 361
++ GAGG RA + G R+ + + RA+ L A + EDI
Sbjct: 1435 --LVVGAGGTSRAAVYALHRLGVNRIGLVNRTRSRAEELVAAMPTSWSIEVLEDIEEAMK 1492
Query: 362 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 421
+ I+ + P +T +VP + ++ + Y ++ G V+G
Sbjct: 1493 LEPGIVISTVP----SDTTKVPKELLKRKGGGVLVELAYEINSG--YENVLGDGWKFVNG 1546
Query: 422 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+E+ + Q QF ++TGK+ P + + +++
Sbjct: 1547 LEILIEQGSKQFEIWTGKKMPIDKVWKVI 1575
>gi|329943069|ref|ZP_08291843.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|332287652|ref|YP_004422553.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|384450809|ref|YP_005663409.1| 3-dehydroquinate dehydratase [Chlamydophila psittaci 6BC]
gi|384451804|ref|YP_005664402.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|384453757|ref|YP_005666353.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|384454736|ref|YP_005667331.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|392376882|ref|YP_004064660.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|407454281|ref|YP_006733389.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|407456971|ref|YP_006735544.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
gi|313848225|emb|CBY17226.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|325506567|gb|ADZ18205.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|328814616|gb|EGF84606.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|328914903|gb|AEB55736.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila psittaci 6BC]
gi|334692538|gb|AEG85757.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|334693514|gb|AEG86732.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|334694493|gb|AEG87710.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|405781040|gb|AFS19790.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|405784232|gb|AFS22979.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
Length = 477
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 38/416 (9%)
Query: 25 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRM 84
+ LAE L +Y+D + L K ++ + I+S + D + E + L + M
Sbjct: 72 TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKIILSYHSD----TSEHIPNLCNEM 125
Query: 85 QATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYG 144
A K+ + + R Q+ H +G G+ S++LSP A+ Y
Sbjct: 126 LRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKNAINYA 185
Query: 145 SLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 202
S P + G ++E L Y +++++++++GLI PV S + HN F + N
Sbjct: 186 SGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLIGNPVDRSISHLSHNKLFSELQLN 244
Query: 203 GIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 260
Y+ + + +L +FFS F G SV P+K V+++ D + P Q + NT++
Sbjct: 245 MSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTDVLEYIDILDPSVQQCQSCNTLVF 304
Query: 261 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 320
R D K+ GYNTD G N L + + G+GGA +A+A
Sbjct: 305 R--DNKIAGYNTD-------------GLGLLNLLKRKNILLQNKHVGIVGSGGAAKAIAT 349
Query: 321 GAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD 380
GA++ IF+ A+ L+ G A P LN E I + L + P+ +
Sbjct: 350 TFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----LNALSENHNI--DILILCLPPDVE 403
Query: 381 RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 436
+ ++ D P+++ K A+ G I+ G EMF QA+ QF+L+
Sbjct: 404 IPEIYPP------VIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLW 453
>gi|450126912|ref|ZP_21868406.1| shikimate 5-dehydrogenase [Streptococcus mutans U2A]
gi|449231156|gb|EMC30368.1| shikimate 5-dehydrogenase [Streptococcus mutans U2A]
Length = 289
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 32/302 (10%)
Query: 168 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 225
I+ T++ +++ P+ HS P +HN F NG+YV + +L+ D
Sbjct: 2 QIDGYTRLAAVVATPIKHSISPFIHNYAFEKTGVNGVYVAWDIPESELQVTLENIMRYDM 61
Query: 226 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 285
G +V PYK+AV+ + DEV A I AVNTI+ R DG+LIGYNTD
Sbjct: 62 FGINVSMPYKQAVIPYLDEVTKAADLIGAVNTIVNR--DGRLIGYNTDG----------- 108
Query: 286 KERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDF------E 337
G+ +F +A ++ + G GGA A+ A GA+ + IF+ E
Sbjct: 109 --FGFFKSLGTFADFDVADKVITILGGGGAATAIIAQAVINGAKKINIFNQTAFLEETKE 166
Query: 338 RAKSLASDVMGAAR--PFEDILNFQPEK---GAILANATPLGMHPNTDRVPVSEETLRDY 392
+AK ++S A P ED LN +K + NAT +GM + + S E +
Sbjct: 167 KAKQISSKTGAAIEVFPVED-LNMIQKKVLVSDLFVNATNVGMDGKSMIINDSFEFPPNL 225
Query: 393 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
+V D +Y P +T L+ + G V+G+ M L QA F L+TGKE P + + + +
Sbjct: 226 -MVADVIYQPFETPFLRLVRSRGLKAVNGLGMLLFQAAAAFELWTGKEMPSQEIWQALEK 284
Query: 453 KF 454
K+
Sbjct: 285 KY 286
>gi|322376254|ref|ZP_08050747.1| shikimate dehydrogenase [Streptococcus sp. M334]
gi|321282061|gb|EFX59068.1| shikimate dehydrogenase [Streptococcus sp. M334]
Length = 284
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 136/306 (44%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV + DDL+ + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEADDLEVTVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEAHLIGAVNTVVNH--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF + G+ L GAGGA +++ A G + F R+ S+
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVSIEK-----T 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLYALEYVSELQERIAESDLLVNATSVGMDGQSSPVPENLVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARRQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|88602321|ref|YP_502499.1| shikimate 5-dehydrogenase [Methanospirillum hungatei JF-1]
gi|88187783|gb|ABD40780.1| shikimate dehydrogenase [Methanospirillum hungatei JF-1]
Length = 454
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 172 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 231
D ++G++ P HSK P ++N F Y D +F S G SV
Sbjct: 198 DIFLYGILGYPCMHSKSPGIYNHLFADYGMPAHYTWFEHKDPGRFLSLLPGTGVRGLSVT 257
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+KE V+ + DE+ A++I AVNTI+ + D K G+NTD + +E
Sbjct: 258 IPHKETVIPYLDEIKHDAESIGAVNTILIQ--DDKKYGFNTDWKGIYRPLE--------- 306
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
GT G V+ GAGGA A + RG VI + ERA+ LA
Sbjct: 307 -GTH-------GDTAVILGAGGAAAAAVYAVSMRGFTPVILNRTPERAEHLARKSGAEIG 358
Query: 352 PFEDILNFQPEKGAILANATPLGM--HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
DI + P+ +L NATP+GM P+T P+ L VFD VYTPR T LL+
Sbjct: 359 TLADIGKYHPD---LLINATPIGMGSDPHT---PIPPSALEPGMKVFDLVYTPRDTPLLQ 412
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
A A+G ++ G EMF+ Q QF + TG E P +REI+
Sbjct: 413 AALASGCSVIPGTEMFIHQLAEQFRILTGIETPISRLREIL 453
>gi|284929739|ref|YP_003422261.1| shikimate dehydrogenase [cyanobacterium UCYN-A]
gi|284810183|gb|ADB95880.1| shikimate dehydrogenase [cyanobacterium UCYN-A]
Length = 289
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST----YSSPD 224
I TK+ G+I PV HS P++HN + + IYVP V KK T ++
Sbjct: 4 ITGKTKLLGVIGDPVKHSLSPVIHNTVISELEVDYIYVPFSVT--KKHLDTALIGLANIG 61
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
GF+V P+K+A++ ++ AQ I AVNT+ +D G NTD I I ++
Sbjct: 62 VVGFNVTIPHKQAILPLLCKITKTAQMIGAVNTVWH--TDEGWNGTNTD----IIGILES 115
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLA 343
+K N S P+ + G GGA +A + AK +++ +++ K+
Sbjct: 116 LKPL---NCNWSKIKPM------ILGCGGAAKASIVALAKLGCTDIIVVGRSYDKLKTF- 165
Query: 344 SDVMGAARPFEDI-------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 393
+V + F+ I L+ K +L NATP+GM PN ++ P+++E L+
Sbjct: 166 KEVWSKNKFFDSINIYCFSELSKILHKTQLLINATPVGMSPNINKSPINKELLKKLPSKA 225
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+V+D +Y+P T LL+DA G ++G M + Q L+ + P + M
Sbjct: 226 IVYDLIYSPSSTMLLQDAHNLGLATMNGSTMLVYQGAASLELWLQRTIPIDLMHR 280
>gi|401564446|ref|ZP_10805339.1| shikimate dehydrogenase [Selenomonas sp. FOBRC6]
gi|400188848|gb|EJO22984.1| shikimate dehydrogenase [Selenomonas sp. FOBRC6]
Length = 288
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 24/291 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFA 226
I T++ +I P+ HS PI+ N + +Y +P+ D L A
Sbjct: 2 ITGKTRLLAVIGAPIAHSLSPIIQNAALHAAGLDYVYAALPVRADALASAVRGLYDAGIA 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K A++ D + A+ I AVNT++ DG+L+G+NTD
Sbjct: 62 GFNVTIPFKTAIIPLMDALSEDARRIQAVNTVV--VEDGRLVGHNTDVA----------- 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 345
G+ G A G L G+ VL GAGGA RA +G G + + E+ +LA+D
Sbjct: 109 --GFLAGFAERGIALTGKNAVLIGAGGAARAALWGLLRSGVSSIAIGVRSVEKGAALAAD 166
Query: 346 VM--GAARP--FEDILNFQPEKGA-ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
G R F+D A I+ TPLGM P+T+ +P V ++ +V+D +
Sbjct: 167 FATDGDVRAVSFDDAAWIAACSDADIVVQTTPLGMTPHTEEMPPVDAAMIKPSAVVYDLI 226
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
YTP +TR L +A A G ++G M + Q F+L+TGK E M+ ++
Sbjct: 227 YTPAETRFLGEARARGCETINGETMLVAQGAEAFHLWTGKRPDVELMKRVL 277
>gi|342164010|ref|YP_004768649.1| shikimate 5-dehydrogenase [Streptococcus pseudopneumoniae IS7493]
gi|341933892|gb|AEL10789.1| shikimate 5-dehydrogenase [Streptococcus pseudopneumoniae IS7493]
Length = 284
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 31/295 (10%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEASDLAETVANICRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + D + A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDGLSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 347
SF + G+ L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSIIAQAILDGVSQISVFVRSVSMEKTRPHLDKLQ 169
Query: 348 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
ED+ Q +L NAT +GM + VP L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQARIADSGLLVNATSVGMDGQSSPVP-ENINLTETLLVADII 228
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|253681039|ref|ZP_04861842.1| shikimate dehydrogenase [Clostridium botulinum D str. 1873]
gi|253562888|gb|EES92334.1| shikimate dehydrogenase [Clostridium botulinum D str. 1873]
Length = 270
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 26/280 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGF 232
++GL+ + + HS P +H+ F+ + NG Y + +D++ + G +V
Sbjct: 4 LYGLLGEKLVHSFSPQIHSLIFKELKINGYYHLFEVHKEDIEHIVPGFKIFKVQGVNVTI 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
PYK VM + D++ A+ I A+NTI +GK GYNTD G+
Sbjct: 64 PYKVIVMNYIDDISFEAKNIGAINTICFE--NGKTKGYNTDY-------------YGFGM 108
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRAL---AFGAKSRGARVVIFDIDFERAKSLASDVMGA 349
F + G+ V+ G GGA +A+ K V D+D +R + +++
Sbjct: 109 MLEKFNIDVEGKNIVILGTGGASKAVNQYLLDNKVNNITFVTRDLDNKRKELKEYNLIS- 167
Query: 350 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 409
+ DI N + + I+ N TP GM+P+ ++ P++EE + +++V D +Y P++T ++K
Sbjct: 168 ---YSDIKNLKNQD--IVINCTPCGMYPDIEKSPLTEEQVSKFKIVVDLIYNPQETLIMK 222
Query: 410 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 449
A+ G +++G+ M + QA+ L+ + KE + +I
Sbjct: 223 YAKNQGIKVINGLYMLVGQAVKSQELWNSLKIKKELVDKI 262
>gi|294790687|ref|ZP_06755845.1| shikimate dehydrogenase [Scardovia inopinata F0304]
gi|294458584|gb|EFG26937.1| shikimate dehydrogenase [Scardovia inopinata F0304]
Length = 302
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 41/300 (13%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ +T++ GLI+ P HS P++HN +F N Y V D L+ + +
Sbjct: 8 IDGNTRIAGLIAHPARHSLSPLMHNLSFISRGINARYCAFDVEADQLEAAIESIRALKML 67
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKEAV+ F D++ + + +VNTI+ R G L GY TD + +++K
Sbjct: 68 GANVSMPYKEAVIPFLDQLDQTSSLVGSVNTIVNR--QGILTGYTTDG----LGLVNSLK 121
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF--------- 336
RGY + G+ LAGAGGAG +A A GA ++ IF+ +
Sbjct: 122 ARGYS---------IEGKKITLAGAGGAGSPIAIQAALSGAGQISIFNRAYTSQGQTNPT 172
Query: 337 -ERAKSLASDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVS-- 385
+AK L + ++ P ED F+ E + +AT +GM + S
Sbjct: 173 AHKAKDLVEKITSISQTRAKFFPLEDKAAFRRELLSSDLYIDATSVGMGSQEGQEGQSLV 232
Query: 386 --EETLRDYQLVFDAVYTPRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 442
L + + D VY+P +TRLL A EA + ++G+ M + Q F L+TG++ P
Sbjct: 233 DHPSWLSNLTALVDTVYSPAQTRLLTQAQEARVPVRMNGLGMLIHQGAASFKLWTGQDMP 292
>gi|418200417|ref|ZP_12836862.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47976]
gi|419523637|ref|ZP_14063214.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13723]
gi|73915798|gb|AAZ92767.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915828|gb|AAZ92782.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915862|gb|AAZ92799.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|353865464|gb|EHE45373.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47976]
gi|379556812|gb|EHZ21860.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA13723]
Length = 284
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKCLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|240144474|ref|ZP_04743075.1| shikimate dehydrogenase [Roseburia intestinalis L1-82]
gi|257203508|gb|EEV01793.1| shikimate dehydrogenase [Roseburia intestinalis L1-82]
gi|291535683|emb|CBL08795.1| shikimate dehydrogenase [Roseburia intestinalis M50/1]
gi|291540954|emb|CBL14065.1| shikimate dehydrogenase [Roseburia intestinalis XB6B4]
Length = 289
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 41/304 (13%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 224
+ I+ T + LI PVGHS P ++N +F + + YV + D +K + + +
Sbjct: 3 KRISGHTGLLALIGSPVGHSGSPAMYNYSFEKLGLDYAYVAFDIKEDKVKDAIAAMKTFN 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K K+ DE+ P AQ I AVNTI+ +GKL G+ TD E + + D
Sbjct: 63 MRGCNVTMPDKVEAAKYMDELSPAAQIIGAVNTIVN--DNGKLTGHITDGEGFVHNLRD- 119
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 340
G + G+ +AG GGA A+ GAR + IF+I FER
Sbjct: 120 ------------HGIEIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDAFFERTL 167
Query: 341 SLAS--------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 386
A D+ A+ E+I + I ANAT +GM P D+ V +
Sbjct: 168 QTAEKIKKAVPECVVNVYDIADTAKMTEEI-----QSSDIFANATIVGMKPMDDQSVVKD 222
Query: 387 -ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 445
R +V DAVY P +T+LL++A+ AG V G M L Q + F L+TG++ P E
Sbjct: 223 LSAFRPGLVVADAVYNPEETKLLREAKEAGCTCVGGKGMLLWQGVAAFKLYTGQDMPVED 282
Query: 446 MREI 449
++++
Sbjct: 283 VKKL 286
>gi|225849265|ref|YP_002729429.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643114|gb|ACN98164.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 280
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 31/292 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ TKV+G+ PV HSK P F H+ N +YVP V +DL+K + A
Sbjct: 3 LDGQTKVYGIFGYPVKHSKSPTFQTAAFLHLGINAVYVPFEVNPNDLEKAVESLKVLKIA 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G ++ P+KE V+ + +E+ + I A NTI + DG LI YNTD
Sbjct: 63 GVNITIPHKENVINYVNELSEEVKIIKAANTI--KNIDGYLIAYNTDW------------ 108
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
G+ G L + ++ GAGG+ RA+ +G + ++ + + + +L +
Sbjct: 109 -IGFVEGLKELEPNLEDKRVLVIGAGGSSRAVVYGLLRENVDKIYLANRTLPKVYNLIQE 167
Query: 346 VMGAARPFEDI---LNFQPEKG-----AILANATPLGMHPNTDRVPVSEET-LRDYQLVF 396
R + I ++ Q +G I+ N T +G+ N + P+ + + L+D +V
Sbjct: 168 YKSHFRIIDKIITPISLQDIEGFLNNVDIIVNTTSVGL--NDEDFPLFDYSLLKDSHIVV 225
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D +Y ++T+LLK A+ G +G M + Q F ++TG++AP E M++
Sbjct: 226 DIIY--KETKLLKVAKEKGCKHQNGFPMLIYQGAKSFEIWTGQKAPVEIMKK 275
>gi|374813782|ref|ZP_09717519.1| shikimate 5-dehydrogenase [Treponema primitia ZAS-1]
Length = 281
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 28/292 (9%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+++ G+ PV + ++ F+ N N Y+ M V ++L F + +FAG ++
Sbjct: 7 SELVGVFGCPVDENPTIVMEEAAFKAKNLNWRYITMLVKPENLDAAFEALRALNFAGVNL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +K+ D + A+ I A+NTII R DGKL G NTD G+
Sbjct: 67 TIPHKVEALKYVDGLSKKAELIGAINTIINR--DGKLFGENTD-------------GAGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGA 349
G G L G+ V+ GAGGA RA+ GA +++I + +A +A+ V+
Sbjct: 112 VQGMQKQGLELRGKSIVVLGAGGASRAICVECALAGAGKLLILNRTLHKADEIAA-VVKK 170
Query: 350 ARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
P E + KG IL NAT +G+ P+ + E + +V D + P
Sbjct: 171 NTPCE--VKTAEWKGTAHIPPCDILINATSIGLFPDPGFPDIFYEDITPAMIVQDIIPNP 228
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
KT LK A+ GA+ G+ M + Q F L+TG++AP E M + +F
Sbjct: 229 AKTEFLKKAKERGAMTYDGLSMLVEQGAIGFKLWTGQDAPTEVMHSALAKEF 280
>gi|418076569|ref|ZP_12713804.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47502]
gi|353748272|gb|EHD28925.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47502]
Length = 284
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGVNL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKCLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|329764791|ref|ZP_08256384.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138704|gb|EGG42947.1| shikimate 5-dehydrogenase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 273
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 26/287 (9%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
+K F +I P+ HS P +H+ FR +N + Y+ + +L++ + GF+V
Sbjct: 2 SKTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKGELEEGVESLKKIKIDGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K +MK+ D++ I AVNT+ +G L GYNTD + + + K
Sbjct: 62 TIPHKIEMMKYIDKLDDSCSIIGAVNTV--SNDNGILKGYNTDMDGFLEPFKK--KNLSI 117
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLA--SDVM 347
KN + +L GAGGA RA+ G AK + I + + A +L S +
Sbjct: 118 KN-----------KKILLLGAGGAARAIVAGCAKEHAQTITIANRTIQNANNLVNFSKKI 166
Query: 348 G---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
G A ED+ + + ++ NAT +G+ + P+S E + +V+D VY P
Sbjct: 167 GLDAIAIKIEDVGD-TAKNYDVIVNATSVGLK--NEPSPISLEEINPKTIVYDIVYMPIN 223
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
T LLK A+ GA I+ G EM L QA F ++ G EAP M++ +L
Sbjct: 224 TDLLKKAKEKGATIIYGYEMLLGQATRAFEIWHGIEAPYNAMKKALL 270
>gi|381210422|ref|ZP_09917493.1| shikimate 5-dehydrogenase [Lentibacillus sp. Grbi]
Length = 281
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 132/288 (45%), Gaps = 23/288 (7%)
Query: 176 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKF---FSTYSSPDFAGFSVGF 232
GLI P+ S P +H + + G Y +D F + F GF+V
Sbjct: 5 LGLIGFPIKRSLSPWIHQQFLKRADLEGDYSIQEIDPDDSFEEEIDRLKNSQFDGFNVTV 64
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
PYK+ ++ F D++ A+ I AVNT++ R +GK GYNTD IT++ K+
Sbjct: 65 PYKKRIIDFLDQLDEDARTIGAVNTVVHR--NGKWTGYNTDWTGYITSL---------KH 113
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAAR 351
SF + +L GAGGA R + +G G AR+ I + A+ +A +G
Sbjct: 114 HYPSFFQKKVSNI-LLIGAGGAARGIYYGLVKEGFARIDIANRTQASAEVIAG--LGEKN 170
Query: 352 PFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
I+ + + ++ + T +GM PN + +S + L ++ LV D VY P +T
Sbjct: 171 TNTSIMTLEDAESSLGGYDLIIQTTNIGMKPNVSDMIISLDKLCEHSLVSDIVYQPIETE 230
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L A GA I G M L QA F L+T K+ P + M + + K
Sbjct: 231 FLHQASQRGASIHYGHTMLLYQAQYAFELWTSKKVPADNMEQQLQHKL 278
>gi|182419018|ref|ZP_02950272.1| shikimate 5-dehydrogenase [Clostridium butyricum 5521]
gi|237669217|ref|ZP_04529199.1| shikimate dehydrogenase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376973|gb|EDT74543.1| shikimate 5-dehydrogenase [Clostridium butyricum 5521]
gi|237655104|gb|EEP52662.1| shikimate dehydrogenase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 290
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 38/307 (12%)
Query: 167 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 224
+ I T++ GLI+ P+ H+ P +HN F + + Y+ VD+ L+ S
Sbjct: 3 KRITGHTELIGLIAYPIRHTSSPTMHNAAFAKLGLDYAYLAFEVDNNSLEGAVQGIRSLQ 62
Query: 225 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 284
G +V P K V K+ D++ P A+ AVNTI+ DG L G+ TD + +++D
Sbjct: 63 LKGSNVSMPNKTVVHKYLDKISPAAEMCGAVNTIVNE--DGVLTGHITDGTGYMMSLKDN 120
Query: 285 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA 343
G + G+ + GAGGA A+ A G A + IF+ R
Sbjct: 121 -------------GVDVIGKKMTIVGAGGAATAIEIQAALDGVAELSIFN----RKDDFW 163
Query: 344 SDVMGAARPFEDILNFQPEKGA---------------ILANATPLGMHPNTDRVPVSEET 388
++ R + N + + NAT +GM P + + +++
Sbjct: 164 ANAEETVRKINEKTNCKASLYDLDDLDKLKEEIATSYLFTNATGMGMKPLEGKTYIPDKS 223
Query: 389 -LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 447
LR +V D VY PR+T LL+ A+ G ++G+ M L Q F L+TG++ P E+M+
Sbjct: 224 FLRPDLIVSDVVYFPRETELLRMAKEVGCKTMNGLGMMLFQGAAAFKLWTGEDMPIEYMK 283
Query: 448 EIVLAKF 454
E++ K+
Sbjct: 284 EMLDIKY 290
>gi|427417102|ref|ZP_18907285.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 7375]
gi|425759815|gb|EKV00668.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 7375]
Length = 291
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
+ T++ G+I PV HS PI+HN + + +Y+P + D LK +++
Sbjct: 8 VKGTTQLLGVIGYPVKHSMSPIMHNAAIATLGLDYVYLPFPIAPDQLKTAIDGFAAVGLK 67
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+ +M + EV +AQAI AVNT+ SD G NTD I + +
Sbjct: 68 GFNITIPHKQTIMPWLTEVSDVAQAIGAVNTVWW--SDQGWCGTNTDAAGFIAPLRALGR 125
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
+ + A + G L G + ++ F +E + +
Sbjct: 126 DWSHAPALILGNGGAARAVVAACHQLGCPEVLVVGRSAD--KLAAFAQSWEMSPLQPNLS 183
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVFDAVYTPR 403
+ +++L K ++ NATP+GM P + P+++E L + +D +Y PR
Sbjct: 184 VHTWDRLDELL----PKAGLVVNATPIGMAPKIEASPLTDEQMVLLPSQAIAYDLIYVPR 239
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
TR L+ A AAG G+EM ++Q ++T + P + MR+ +L
Sbjct: 240 PTRFLQQANAAGLGTFDGLEMLVQQGAAALEIWTQQPPPVDVMRQALL 287
>gi|418130526|ref|ZP_12767409.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA07643]
gi|418187363|ref|ZP_12823888.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47360]
gi|418230094|ref|ZP_12856697.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP01]
gi|419478023|ref|ZP_14017847.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA18068]
gi|421243292|ref|ZP_15699810.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2081074]
gi|421270791|ref|ZP_15721646.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SPAR48]
gi|73915864|gb|AAZ92800.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|73915882|gb|AAZ92809.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae]
gi|353801850|gb|EHD82150.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA07643]
gi|353851113|gb|EHE31111.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA47360]
gi|353887616|gb|EHE67394.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae EU-NP01]
gi|379565459|gb|EHZ30451.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae GA18068]
gi|395608284|gb|EJG68379.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae 2081074]
gi|395867920|gb|EJG79040.1| shikimate 5-dehydrogenase [Streptococcus pneumoniae SPAR48]
Length = 284
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 140/306 (45%), Gaps = 53/306 (17%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 230
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINL 66
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
PYKE V+ + D++ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDKLSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
SF ++G+ +L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKCLPSF--TISGKKMILLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 351 RPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEET 388
RP+ D L Q + +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVVDIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 449 IVLAKF 454
+ K+
Sbjct: 278 SLTEKY 283
>gi|326433195|gb|EGD78765.1| hypothetical protein PTSG_11780 [Salpingoeca sp. ATCC 50818]
Length = 1521
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 189/446 (42%), Gaps = 38/446 (8%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
R GG DE L L LG D +D E S+ + + + GT ++S +
Sbjct: 1065 RSAKQGGKLALDEDGYFNLLSLGARLGCDALDVETCWDSSHI-ESVCAPLRGTTIVMSQH 1123
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV------PIIA 120
+++ LV D+IK+VF+ ++++ + Q P+I
Sbjct: 1124 FGRPCTHVDEVLTLVQGSNLPFVDVIKIVFTATEVSDCFLLQQARERVHAEKVVTKPMIL 1183
Query: 121 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLIS 180
+GE+G +S++ + + + ++ GT G T E + + + + F ++
Sbjct: 1184 LLMGEQGRLSRVTNTMLT-PVTHANMPGTAAPGQLTWEQVLRLRRTLGLLRPRSFF-IVG 1241
Query: 181 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 240
PV S P++H FR Y + + S ++S F G SV P+K++V+
Sbjct: 1242 SPVALSPSPLMHRTGFRLAGLPWTYERLDTTSMVDVRSVFASEGFMGASVTMPFKQSVLP 1301
Query: 241 FCDEVHPLAQAIAAVNTIIRRPS-DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 299
+ A+ I AVNT++R + + +L+G+NTD + ++ A+ +
Sbjct: 1302 LLAWMDEHARRIGAVNTVVRGGAGNTQLLGFNTDWVGIVKPLQSAMPAETRER------- 1354
Query: 300 PLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD----VMGAARPFE 354
G + VL GAGG RA + G V + + ERA++L D + +A +
Sbjct: 1355 --TGNVLVL-GAGGTARAACYALHYLGFTSVYVVNRTPERAEALCRDFGVRAIDSAEALD 1411
Query: 355 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 414
D++ + P T V L+ +VFD Y PR T LL+ A AA
Sbjct: 1412 DVVLI-------------ISTLPPTAAATVPATLLQSKPVVFDVTYIPRMTPLLEQAHAA 1458
Query: 415 GAIIVSGVEMFLRQAIGQFNLFTGKE 440
G I G++M + Q I Q LFT +
Sbjct: 1459 GCRIFGGIDMLIAQGIEQQRLFTRRH 1484
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,161,225,137
Number of Sequences: 23463169
Number of extensions: 309215839
Number of successful extensions: 912475
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3722
Number of HSP's successfully gapped in prelim test: 3782
Number of HSP's that attempted gapping in prelim test: 893555
Number of HSP's gapped (non-prelim): 7961
length of query: 454
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 308
effective length of database: 8,933,572,693
effective search space: 2751540389444
effective search space used: 2751540389444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)