BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012866
(454 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1
SV=1
Length = 603
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/446 (52%), Positives = 304/446 (68%), Gaps = 2/446 (0%)
Query: 7 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 66
RPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS +
Sbjct: 155 RPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 214
Query: 67 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 126
TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GER
Sbjct: 215 NYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGER 274
Query: 127 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 184
GL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 275 GLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPVS 334
Query: 185 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 244
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CDE
Sbjct: 335 HSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDE 394
Query: 245 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 304
V PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA +
Sbjct: 395 VDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASK 454
Query: 305 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 364
V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G
Sbjct: 455 TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDG 514
Query: 365 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 424
+LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EM
Sbjct: 515 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEM 574
Query: 425 FLRQAIGQFNLFTGKEAPKEFMREIV 450
F+RQA QF +FTG APKE +I+
Sbjct: 575 FVRQAYEQFEIFTGLPAPKELYWQIM 600
>sp|Q8TZ24|AROE_METKA Shikimate dehydrogenase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=aroE PE=3 SV=1
Length = 290
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 29/296 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 226
++A+T V GLI PV HS P +HN F+ + N +Y+ V + + + D
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAVM+ CDE+ A+ I AVNT+ R S GK+ G+NTD E + A+ +
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRAL----R 120
Query: 287 ERGY--KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLA 343
E Y GT S V+ GAGGA RA++F + GA +VI + +RA+ LA
Sbjct: 121 EETYFDPRGTKS----------VILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLA 170
Query: 344 SD----VMGAARPFE---DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLV 395
+ V AR D + + +L +ATP+GM+PN D P V+ + + + +V
Sbjct: 171 EELKEKVGVKARAIGLDGDEIERELRDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIV 230
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D VY P +TRLL++AE AGA VSGV M + Q F L+TG+EAP E MRE VL
Sbjct: 231 NDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVL 286
>sp|Q818D0|AROE_BACCR Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=aroE PE=3 SV=1
Length = 277
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>sp|B7HCW1|AROE_BACC4 Shikimate dehydrogenase OS=Bacillus cereus (strain B4264) GN=aroE
PE=3 SV=1
Length = 277
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>sp|A9VHW1|AROE_BACWK Shikimate dehydrogenase OS=Bacillus weihenstephanensis (strain
KBAB4) GN=aroE PE=3 SV=1
Length = 277
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y+ V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>sp|B9IYA1|AROE_BACCQ Shikimate dehydrogenase OS=Bacillus cereus (strain Q1) GN=aroE PE=3
SV=1
Length = 277
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|B7HPN3|AROE_BACC7 Shikimate dehydrogenase OS=Bacillus cereus (strain AH187) GN=aroE
PE=3 SV=1
Length = 277
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|B7IYI7|AROE_BACC2 Shikimate dehydrogenase OS=Bacillus cereus (strain G9842) GN=aroE
PE=3 SV=1
Length = 277
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>sp|Q6HDI8|AROE_BACHK Shikimate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=aroE PE=3 SV=1
Length = 277
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|B7JNW6|AROE_BACC0 Shikimate dehydrogenase OS=Bacillus cereus (strain AH820) GN=aroE
PE=3 SV=1
Length = 277
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q634K8|AROE_BACCZ Shikimate dehydrogenase OS=Bacillus cereus (strain ZK / E33L)
GN=aroE PE=3 SV=1
Length = 277
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q46DZ6|AROE_METBF Shikimate dehydrogenase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=aroE PE=3 SV=1
Length = 280
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ P+ HS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 232 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P KE +K C + PLA+ I AVNTI+ + G++ GYNTD + A++++ E
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVE--- 118
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 350
+ G V+ GAGGA R++AF + GA + I + RA LA D+ A+
Sbjct: 119 ----------MEGSKIVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAAS 168
Query: 351 -------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ + N + IL N T LGMHPN D + E L VFD VY P
Sbjct: 169 LSGNVTGKGLSGLKNLL-QDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPL 227
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+TRLL++A+A+GA VSGV M + Q F L+TG E P E M++ VL
Sbjct: 228 ETRLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKKTVL 275
>sp|A0RIV1|AROE_BACAH Shikimate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam)
GN=aroE PE=3 SV=1
Length = 277
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + +GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q730K1|AROE_BACC1 Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 10987)
GN=aroE PE=3 SV=1
Length = 277
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ +I +
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-SISSK--- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
L E+ I+ T +GMHP + P+ +L +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKI 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>sp|C3L5T8|AROE_BACAC Shikimate dehydrogenase OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=aroE PE=3 SV=1
Length = 277
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|A7GT28|AROE_BACCN Shikimate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=aroE PE=3 SV=1
Length = 277
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+ + Y V++ L + + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+MK+ DE+ PLA+ I AVNT++ R +GKL+GYNTD + +++ KE
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD----V 346
PL + +L GAGGA RA+ + G + + I + E AK L + V
Sbjct: 117 --------PLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERV 168
Query: 347 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
+ A E Q E +L T +GMHP+ P+ +L+ +V D +Y P +T+
Sbjct: 169 VSKALSLEKATEAQ-ENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETK 227
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
L DA+ +GAI+ +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 FLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDINRMKQLVIRKL 275
>sp|C1ESM8|AROE_BACC3 Shikimate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=aroE
PE=3 SV=1
Length = 277
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 231
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K A+M + DE+ PLA+ I AVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 346
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 347 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 404
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 405 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>sp|Q0AZJ6|AROE_SYNWW Shikimate dehydrogenase OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=aroE PE=3 SV=1
Length = 290
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 158/293 (53%), Gaps = 27/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 226
++ T++ GLI P+ HS P++HN T + + N IY+ + +++ L + S + +F
Sbjct: 3 LDIKTELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE ++ F DE+ P A A AVN I + +G L GYNTD + +A++
Sbjct: 63 GLNVTIPYKEKIIPFLDELSPEAAAFGAVNVI--KNKNGHLHGYNTDGRGFV----EALR 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
E G G + +F+ GAGGA R++AF G +R+ D+DF RA+ LA
Sbjct: 117 EEGIDPGERA--------LFI--GAGGAARSVAFALAGLGVSRLDFLDLDFSRARQLAEF 166
Query: 346 VMG-----AARPFEDILNFQ--PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-D 397
+ A+ + L FQ +I+ N +P+GM P+T + PVS+E LR + V D
Sbjct: 167 ITSRSSSLASAFLMNTLEFQRLSRTASIIINCSPVGMFPDTGKSPVSKEDLRGSRAVLCD 226
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P ++R L + G ++G+ MF++Q + G++ P ++M+E+V
Sbjct: 227 LIYNPLQSRFLSLGQELGLETMNGLGMFVQQGALTLEILLGQKPPLDYMKEVV 279
>sp|Q8RAG2|AROE_THETN Shikimate dehydrogenase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=aroE PE=3
SV=1
Length = 280
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 26/289 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TKVFGLI PV HS P++HN +F +N+NG+YV V + L+ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENAVKGLKALGIK 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+KE+VM + D V A+ I AVNT++ +G L GYNTD + I D++K
Sbjct: 63 GFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----DSLK 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
E + GR + GAGGA +A+ F G +VI + +AK+LA
Sbjct: 117 E---------LKEDVRGRKAFVLGAGGASKAICFALAREGVESIVIANRTLNKAKALAEY 167
Query: 346 VMGAAR------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 399
+ + E++ F + IL N T +GMHP PVSEE + V+D +
Sbjct: 168 IREEFKMKCDYCSIEEVEKFN--EIDILINTTSVGMHPEVGNSPVSEEVVAKANFVYDLI 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Y P +T LK A G +G+ M + QA F L+TG+ K+F+ E
Sbjct: 226 YNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTGEFFDKDFVYE 274
>sp|O26344|AROE_METTH Shikimate dehydrogenase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=aroE PE=3 SV=2
Length = 283
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 25/289 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I T V G++ P+GHS PI+HN FR + + IYVP V ++LK +
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAV+++ D++H A I AVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTS 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
G G F LA G + + I + E+A+ LA D
Sbjct: 120 VEGSSVLILGAGGAARACAFQLAEKGASD-------------ITILNRTPEKARLLAED- 165
Query: 347 MGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 399
M FE +++ + IL + TP+GMHP+TD P V E + + +V D V
Sbjct: 166 MADKLGFEASYGGYELIQGSVKSADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLV 225
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
Y P++T LL++AE A AI VSG+ M L Q + F ++TG++ P + M +
Sbjct: 226 YNPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTGRDPPLDVMED 274
>sp|A8MEE1|AROE_ALKOO Shikimate dehydrogenase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=aroE PE=3 SV=1
Length = 286
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 29/298 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I +TK+ G+I +P+ S P +HN F+++N N IY+P V DL K F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VM + DEV A+ I AVNT++ + +GKL+G+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLEDE-- 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
G + + FV+AGAGGA R++A GA+ + I + ++A +A
Sbjct: 121 -----------GIYVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQ- 168
Query: 346 VMGAARPFEDI---------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 396
++G + P I L E+ +L N T LGM+ + + EE + LV
Sbjct: 169 LIGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVV 228
Query: 397 -DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
D +Y P KT+LL+ AE+ G ++G+ M + QA F L+T P +++++ + +
Sbjct: 229 SDLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKKTLFTR 286
>sp|A5UMF6|AROE_METS3 Shikimate dehydrogenase OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=aroE PE=3 SV=1
Length = 281
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 148/292 (50%), Gaps = 32/292 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 345
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 346 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPN-TDRVPVSEETLRDYQLVF 396
+ + D ++F IL + TP+GM P+ D V E + +V
Sbjct: 164 LKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVN 221
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 222 DIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>sp|C0ZB07|AROE_BREBN Shikimate dehydrogenase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=aroE PE=3 SV=1
Length = 283
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 22/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
I + T++ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSL---VE 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEH 167
Query: 346 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 401
V G P + + + E ++L N T +GM PN PV E L V D +Y
Sbjct: 168 V-GMIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYN 226
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P +TRLLK+A A GA + SG+ MF+ Q F L+TG++AP MRE+VL +
Sbjct: 227 PLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVVLQQL 279
>sp|Q8THC3|AROE_METAC Shikimate dehydrogenase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=aroE PE=3 SV=1
Length = 280
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 146/293 (49%), Gaps = 35/293 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ PVGHS P +HN F + + IY V ++L+K + F G ++
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKER 288
P KE +K D + P LA+ I AVNT++ + G++ GYNTD + A+ E A++ R
Sbjct: 63 VPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVEIR 120
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G K A G F LA + GA + + + ERA LA DV
Sbjct: 121 GSKVVVAGAGGAARAVAFQLA--------------ADGAEITVVNRTEERAVELAKDVAA 166
Query: 349 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A+ P +++L IL N T LGMHPNTD + E L VFD
Sbjct: 167 ASLPGKINGTGLSGLKELLR----DADILINTTTLGMHPNTDTTIATAEELHSGLTVFDI 222
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VY P +TRLLK+A+ AGA VSGV M + Q F L+TG EAP E M++ VL
Sbjct: 223 VYNPLETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKKTVL 275
>sp|Q8U0A6|AROE_PYRFU Shikimate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=aroE PE=3 SV=1
Length = 271
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 138/285 (48%), Gaps = 22/285 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-DLKKFFSTYSSPDFAG 227
IN +TK++G+I PV HS PI+HN F+ N IYVP V DLK + + D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
+V PYKE V+KF DE+ +Q I +VNT++ +GKL+GY TD + A+E
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVNL--EGKLVGYTTDGIGARRALE----- 114
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 347
F + +L G S+ A VV+ + E+AK L
Sbjct: 115 --------RFTQVDGANILILGAGGAGKAIAY--ELSKVANVVVLNRTIEKAKRLEK--F 162
Query: 348 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
G + L + E IL NAT +GM+ VP + LR +V D VY P T L
Sbjct: 163 GIVGDSLEALPYYVEWADILINATSVGMNEEKSLVP--KNLLRPGLVVMDIVYKPLNTLL 220
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 452
L+ A+ G I + G+ M + Q F L+TG+E E MR + LA
Sbjct: 221 LRYAQEKGCIAIDGLWMLVYQGAESFRLWTGEEGDVELMRRVALA 265
>sp|C5D4W2|AROE_GEOSW Shikimate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=aroE
PE=3 SV=1
Length = 277
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++ L PV HS PI+HN F+++N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K AVM DEV P A+ I AVNTI+ R +G+LIGYNTD + A+E+ I
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEIN----- 115
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 350
+ + +L GAGGA R + RGA+ + I + +AK L + +
Sbjct: 116 -------VDIKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASV 168
Query: 351 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 407
LN E+ IL N T +GM+PN + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSVVYSLNEAEERLGEYDILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKW 228
Query: 408 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LK+A II +GV MF+ Q F +TG + M++IV+ +
Sbjct: 229 LKEARKRNGIIQNGVGMFVYQGALAFEKWTGIFPDVQRMKKIVIEQL 275
>sp|Q8YVC1|AROE_NOSS1 Shikimate dehydrogenase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=aroE PE=3 SV=1
Length = 289
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 29/297 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 345
R + A V+ G GGA RA+ G G A + + + +R +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 346 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 395
+ ++ + P+ +L N TP+GM+P D P+S E L + Q +
Sbjct: 168 WENSPIAENLQVHTWDYLAKLIPQAN-LLVNTTPIGMYPQVDESPLSAEELVNLQTGTIA 226
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 451
+D +Y P+ T+ L+ A+ GAII+ G+EM ++Q + ++ + + P + MR+ ++
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIIIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQALI 283
>sp|A6TM69|AROE_ALKMQ Shikimate dehydrogenase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=aroE PE=3 SV=1
Length = 286
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 27/297 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I+ T++ GL+ PV HS P++HN F+H+ + +Y+ V D+LK+ + D A
Sbjct: 5 ISGYTRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVA 64
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P K+ ++ DE+ A+ I +VNT++ + +G L GYNTD
Sbjct: 65 GFNVTMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDG------------ 110
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 345
+GY G A G G+ V+AGAGGA +++A GA+ + I + E A+ + +
Sbjct: 111 -KGYVMGLADEGISPEGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNI 169
Query: 346 V-------MGAARPFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 396
+ +A +ED L Q ++ + N T LGM + ++ +S + L +V
Sbjct: 170 INKNIPTCKTSATGYEDNELKQQLKEADLFINCTNLGMGSHEEKSIISSTDILHPDLIVS 229
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 453
D VY P KT+LL AE G ++G+ M + Q F L+TG++ P E+++ I+L+K
Sbjct: 230 DVVYAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK 286
>sp|A4J3A0|AROE_DESRM Shikimate dehydrogenase OS=Desulfotomaculum reducens (strain MI-1)
GN=aroE PE=3 SV=1
Length = 291
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 163/293 (55%), Gaps = 25/293 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN T+V GL PV HS P +HN F+ ++ N YVP V D+LK+ + S + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+K+ VM F DE+ P A+ I AVNTI+ ++GKL+GYNTD + + A+ +
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVN--NNGKLVGYNTDGKGFVRALTEE-- 121
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 345
A F +PL G+ +L GAGGA RA+A G R + I + + E+A+ LA D
Sbjct: 122 --------ARF-NPL-GKSAILIGAGGAARAVAVQLALSGLRTIYITNRNQEKAEELARD 171
Query: 346 VM------GAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFD 397
++ + P+ ++L + + ++ ATPLGM P D+VP + L LV D
Sbjct: 172 ILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCD 231
Query: 398 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P +T L+ A++ G+ ++G+ M L Q + F L+TG AP + MR ++
Sbjct: 232 LIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVL 284
>sp|Q3M8H2|AROE_ANAVT Shikimate dehydrogenase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=aroE PE=3 SV=1
Length = 289
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 27/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL--A 343
R + A V+ G GGA RA+ G G A + + + +R + +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 344 SDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LVF 396
D A + D L + +L N TP+GM+P D P+S E L + Q + +
Sbjct: 168 WDNSPIAENLQVHTWDYLAKLVPQANLLVNTTPIGMYPQVDESPLSTEELANLQTGAIAY 227
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMRE 448
D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ + + P + MR+
Sbjct: 228 DLIYIPKPTQFLQKAQQQGAIAIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQ 280
>sp|Q58484|AROE_METJA Shikimate dehydrogenase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=aroE PE=1 SV=1
Length = 282
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
KN V+ GAGGA RA+AF ++ ++I + E+A++LA ++
Sbjct: 120 RVKDKN-------------IVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 165
Query: 347 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 398
G F L+ + I+ NATP+GM+PN D P V E LR+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSG-LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDL 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>sp|A5FRZ5|AROE_DEHSB Shikimate dehydrogenase OS=Dehalococcoides sp. (strain BAV1)
GN=aroE PE=3 SV=1
Length = 286
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G++ GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLE--------HN 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + +S LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLISPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>sp|Q5WHI2|AROE_BACSK Shikimate dehydrogenase OS=Bacillus clausii (strain KSM-K16)
GN=aroE PE=3 SV=1
Length = 275
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 150/285 (52%), Gaps = 23/285 (8%)
Query: 173 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 230
T+ FGLI P+GHSK P++H ++ + + +Y + +L T + GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 231 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 290
P+K A++ + DE+ A+A+ AVNT++ + DG+ +G NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 291 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA---SDVM 347
L GR ++ GAGGA RA+ + A + + + E+A+ LA S +
Sbjct: 119 ----------LTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLT 168
Query: 348 GAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A P + + G +L N T +GM+P+T + P++ + L+ +V D +Y P +T
Sbjct: 169 IEAIPLNE---AESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYET 225
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
LL++A+ G I++G+ MF+ Q +TG++ ++ M +V
Sbjct: 226 ALLQEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
>sp|Q3ZZN3|AROE_DEHSC Shikimate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1)
GN=aroE PE=3 SV=1
Length = 286
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 349 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 405
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 406 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>sp|Q9V1H7|AROE_PYRAB Shikimate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=aroE PE=3 SV=1
Length = 264
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 23/282 (8%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 233
KV+GLI KPV HS P++HN FR + +YV V++L K + +G +V P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 234 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 293
YKE V KF DE+ A+ I +VNTII +G LIGY TD + A+E
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTIIN--LEGSLIGYTTDGVGARKALERF--------- 110
Query: 294 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DVMGAARP 352
+ + GR ++ GAGGAG+A+A+ S+ A +V+ + +AKSL V G +
Sbjct: 111 -----TEIEGRNVLILGAGGAGKAIAY-ELSKIANIVVLNRTPSKAKSLEKFGVKGGS-- 162
Query: 353 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 412
+++ N+ +L NAT +GM N VP LR +V D VY P KTRLL+DAE
Sbjct: 163 LDELPNYVGW-ADVLINATSVGMGTNESLVP--RRLLRRELIVMDIVYKPLKTRLLRDAE 219
Query: 413 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+ G ++ G+ M + Q F L+TG E MR + L +
Sbjct: 220 SVGCRVIDGLWMLIYQGAESFKLWTGIYPDVELMRRVSLERL 261
>sp|P54374|AROE_BACSU Shikimate dehydrogenase OS=Bacillus subtilis (strain 168) GN=aroD
PE=3 SV=2
Length = 280
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 231
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 232 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 291
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 292 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 349
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 350 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 402
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 403 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKL 275
>sp|Q65H34|AROE_BACLD Shikimate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=aroE PE=3 SV=1
Length = 278
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 26/288 (9%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 232
++GLI PV HS P +HN + ++ G Y V+ DL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K ++MK D + A+A+ AVNT+ RR +G L+GYNTD + +++
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNTV-RREKEG-LVGYNTDGAGFLKSLK---------- 111
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 351
S PL+ +L GAGGA RA+ A R+ + + E+A + G AR
Sbjct: 112 --PSLDRPLSELSILLIGAGGAARAIFTTLAAETPKRLDVANRTPEKALAFTQRFDGEAR 169
Query: 352 PFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 406
L+ Q + I+ T +GMHPN + P+S ++ LV D +Y P KT
Sbjct: 170 A----LSLQEAEADLSAYDIVIQTTSVGMHPNVEAAPLSLANAKETCLVCDIIYNPLKTA 225
Query: 407 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
LL +AEA G + GV MF+ QA F L+TG E E M+ IVL +
Sbjct: 226 LLHEAEAKGLKTLDGVGMFIGQAALAFELWTGHEPNMEKMKSIVLQQL 273
>sp|B7KFV3|AROE_CYAP7 Shikimate dehydrogenase OS=Cyanothece sp. (strain PCC 7424) GN=aroE
PE=3 SV=1
Length = 288
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 29/293 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I TK+ G+I PV HS P++HN H+N N IYVP V +DL+ + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K+ ++ + AQ + AVNT+ R ++ G NTD
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWR--TETGWSGTNTDV------------ 109
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF------DIDFERAK 340
G+ P + V+ G GGA RA+ G G R + +D
Sbjct: 110 -HGFLAPLKRLNLPWSQVSPVILGNGGAARAVVVGCYEMGCRQISVVGRTKEKLDHFYQS 168
Query: 341 SLASDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 395
+ + A R + ED+ K +L N TPLGM P+ D+ PV ++ Q +
Sbjct: 169 WQNTPIQEALRVYLWEDLPQLV-SKTQLLINTTPLGMSPHIDQSPVDLTVMKKLQPGAIA 227
Query: 396 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
+D +YTP T LK+A+ GAII+ G+EM +Q +++ + P E M +
Sbjct: 228 YDLIYTPNPTLFLKEAQQQGAIIIDGLEMLAQQGALALSIWIKQSVPVEIMSQ 280
>sp|Q8KBH8|AROE_CHLTE Shikimate dehydrogenase OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=aroE PE=3 SV=1
Length = 295
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 48/304 (15%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV------PMFVDDLKKFFSTYSSPDFAG 227
K+FGLI K V +S P++HN F + +Y P + D K AG
Sbjct: 8 KIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALG---IAG 64
Query: 228 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 287
FSV PYK+ V+ F DE+ P A +I AVNTI+ +G+L+GYNTD +
Sbjct: 65 FSVTIPYKKTVVPFLDELSPEALSIGAVNTIVN--DNGRLLGYNTDID------------ 110
Query: 288 RGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASD 345
G+ + R + G GGA A AF + + V++ D ++A+ + +
Sbjct: 111 -GFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAEDMLEE 169
Query: 346 VMGAARPFEDILNF-------QP------EKGAILANATPLGMHPNTDRV----PVSEET 388
+ D++ QP +L NATP+G D + P
Sbjct: 170 YA-----YRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGL 224
Query: 389 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 448
L D Q+V+D VY P +T LL +A AAGA +++G+EM + QA F+++TG+E P + +R+
Sbjct: 225 LHDGQIVYDMVYNPPETPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRK 284
Query: 449 IVLA 452
VLA
Sbjct: 285 TVLA 288
>sp|Q3Z990|AROE_DEHE1 Shikimate dehydrogenase OS=Dehalococcoides ethenogenes (strain 195)
GN=aroE PE=3 SV=1
Length = 286
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 29/290 (10%)
Query: 175 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 232
+FGLI PV HS P + N F+H + +Y+ + ++L+ ++ + G +V
Sbjct: 8 LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGLNVTI 67
Query: 233 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 292
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDSLDPAAEKIGAVNTIVN--ENGRLKGYNTDFGGFVRLLE--------HN 117
Query: 293 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 348
A A + F L GAGG+ A+A + G + + E+AK LA + G
Sbjct: 118 RIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCLRLSG 172
Query: 349 AARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 403
+ E LN + A ++ N TP+GM + V LR V DA+Y P
Sbjct: 173 KTQGLE--LNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNPC 230
Query: 404 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 452
KTRLL+DAE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 231 KTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMKEAELA 280
>sp|A6VFM7|AROE_METM7 Shikimate dehydrogenase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=aroE PE=3 SV=1
Length = 280
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 33/298 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
++ TK+ GLI PV HS PI+HN + N +Y+ V ++LK S +
Sbjct: 2 MDTKTKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQIT 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + +E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGAKRTLEEK-- 117
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA--- 343
L + ++ G+GGA RA+ F ++ + I + + E+AK L+
Sbjct: 118 -----------AGILIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEF 165
Query: 344 SDVMGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 396
S + +P DI NF I+ N TP+GMHPNT+ PV + ++ +V
Sbjct: 166 SKKLKKQKPINYGDLDLDIKNFD-----IILNTTPVGMHPNTNVDPVIPLKNIKKDAVVM 220
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
D +Y P + LK+A GA ++G+ M + Q F ++TG + M++ + +K
Sbjct: 221 DLIYNPIEPVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWTGMKPDIYVMKKAINSKI 278
>sp|Q3AQX0|AROE_CHLCH Shikimate dehydrogenase OS=Chlorobium chlorochromatii (strain CaD3)
GN=aroE PE=3 SV=1
Length = 287
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFR------HVNYNGIYVPMFVDDLKKFFSTYSS 222
+N+ T++F L+ + V +S P++HN F+ H I V D + +
Sbjct: 1 MNSSTRIFALLGRAVDYSYSPLIHNTAFQALGLPYHYTIFNIAEAALVGDALR---GARA 57
Query: 223 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 282
GFSV PYK+ V+ F DE+ A I AVN I+ + +GKLIGYNTD
Sbjct: 58 LGLGGFSVTIPYKQTVVPFLDELSEEATTIQAVNCIVNK--NGKLIGYNTDI-------- 107
Query: 283 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAK 340
G+ + ++ L G L G+GGA A AF +V++F D ++AK
Sbjct: 108 -----LGFASPLFAYREALHGATIALFGSGGAALAAIEAFQRYFTPKQVLLFARDSQKAK 162
Query: 341 SLASDVMGAAR-------PFEDILNFQPEKGAILANATPLGMHPNTDR---VPVSEETLR 390
S + R P D + + ++ NATPLG D +P+ L
Sbjct: 163 SQLRSSLALERYTNLAIVPLSDYERVRECR--LVINATPLGTKGRADGSAIIPLESNLLH 220
Query: 391 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+V+D VY P T LL+ A+A GA + G+EM + QA F L+TG++ P E +R+ V
Sbjct: 221 SEHIVYDMVYNPTITPLLQAAQAVGASTIFGIEMLIGQAEQAFTLWTGEKMPTELVRQTV 280
Query: 451 LAKF 454
+AK
Sbjct: 281 MAKL 284
>sp|Q67N06|AROE_SYMTH Shikimate dehydrogenase OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=aroE PE=3 SV=1
Length = 294
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 31/295 (10%)
Query: 174 KVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 229
++ G++ PV HS P +HN F H Y VP L+K + + G +
Sbjct: 13 RILGILGHPVAHSASPAMHNAAFAAQGMHAMYGAFDVP--PSQLEKAIAGIRALGLLGVN 70
Query: 230 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 289
V P+KEAVM + D+V P A+ + AVNTI+ R G+LIGYNTD + ++E ERG
Sbjct: 71 VTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLE----ERG 124
Query: 290 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG 348
+ +AGR V+ GAGGA RA+A G AR+ I + +RA+ LA+D+
Sbjct: 125 VR---------VAGRNAVVLGAGGAARAVALHLGMAGVARLTIINRSRQRAEFLAADLAR 175
Query: 349 A--------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAV 399
A A P + + ++ N TPLGM P+T+ P+ + L + +V+D V
Sbjct: 176 AKTPVRAEVADPGSEEARAALAEAGLVVNCTPLGMEPDTESTPLEDVGLLPAHCVVYDTV 235
Query: 400 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
Y P +TRLL++A G I V+G+ M + Q + + G+ P + MR LA
Sbjct: 236 YRPLETRLLREARQHGLITVNGLAMLVHQGACAWEYWFGRRGPVDVMRTAALAAL 290
>sp|A9AB08|AROE_METM6 Shikimate dehydrogenase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=aroE PE=3 SV=1
Length = 279
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 23/293 (7%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
I++ TK+ GLI PV HS PI+HN + + N Y+ V ++LK S + A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF+V P+K +MK+ DE+ A++I AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEE--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K+G + ++ G+GGA RA++F ++ + I + + E+AK L+ ++
Sbjct: 117 ----KSGILIN------KNILIIGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEEL 165
Query: 347 MGAARPFEDI----LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYT 401
+ I LN + I+ N TP+GM+P+TD PV ++ +V D +Y
Sbjct: 166 STKLKKENSIKYGALNIDIKNFDIIINTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIYN 225
Query: 402 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P + LK+A G ++G+ M + Q F ++TGK+ M++ + +K
Sbjct: 226 PLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTGKKPDVYVMKKAINSKI 278
>sp|A6UU64|AROE_META3 Shikimate dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=aroE PE=3 SV=1
Length = 278
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 33/295 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 226
IN+ TK+ GLI PV HS P +HN + + N +Y+ V+ +LK + + +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ D++ A+ I AVNT+ + + K IGYNTD + +IE+ I
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E N ++ GAGG+ RA+ ++ + I + E+A+ +A+D+
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAVCCEL-AKNNNLTIINRTVEKAEIIANDL 165
Query: 347 ---------MGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVF 396
G ++ NF I+ N T LGM+PN D + P+S + ++ +V
Sbjct: 166 SNKLNNAVYYGGLNHNYNMANFD-----IIINTTSLGMYPNVDNKPPISMQNIKKDAVVM 220
Query: 397 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
D +Y P++T LK+A+ G ++G+ M + Q F ++TG + M+ ++
Sbjct: 221 DLIYNPKETLFLKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAII 275
>sp|Q2S0A0|AROE_SALRD Shikimate dehydrogenase OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=aroE PE=3 SV=1
Length = 285
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 32/290 (11%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
++A T++ L+ PV HS P +HN FR + N YV P+ + L + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V P+KEAV+ DEV A+A+ AVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLE---- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDFERAKSLAS 344
ERG G L G ++ GAGGA RA+ +G S R R+ I ++A+ LA+
Sbjct: 117 ERG--------GDALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAA 168
Query: 345 DVM-----GAAR--PFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 393
D+ GA R FE+ L+ + + ++ NATPLGM P+ R D+
Sbjct: 169 DLAAHDPDGALRVSSFEEAALSVRTSR--LVVNATPLGMAPDR-RGQTPWPNPVDFTADH 225
Query: 394 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 443
+V+D VYTP +TRLL++A A GA + G++M + QA + +T + P+
Sbjct: 226 VVYDLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWTDRGMPQ 275
>sp|Q3AEF5|AROE_CARHZ Shikimate dehydrogenase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=aroE PE=3 SV=1
Length = 280
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 28/292 (9%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN +TK+ G+I P+ H+ P +HN F+ +N N +Y+P+ V + L + + +F
Sbjct: 3 INGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFR 62
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
G +V PYKE V F DEV A+ I AVNTI+ G+LIGYNTD + ++++
Sbjct: 63 GINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVH--DRGRLIGYNTDAPGFLLSLKENDV 120
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
E + G+ +L GAGGA RA+A+ + GA ++I + ++AK LA D
Sbjct: 121 E-------------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDF 167
Query: 347 MGAARPFEDI------LNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDA 398
G + E + ++ P A+ N PLGMHP +++P + T D+ + +D
Sbjct: 168 QGVGKISEILELGDKPISLAPYHMAV--NTLPLGMHPYENQMPAVDFTGVTSDF-VAYDL 224
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 450
+Y P +T+ LK ++ GA ++G+ M L Q + F +TG P + M++ +
Sbjct: 225 IYNPAETKFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKKAI 276
>sp|Q8PXE6|AROE_METMA Shikimate dehydrogenase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=aroE PE=3 SV=1
Length = 280
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 174 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 231
+VFG+ PVGHS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 232 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED-AIKER 288
P KE +K D V P LA+ I AVNT++ G + GYNTD + A+ D ++ R
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVF-GKKGDIQGYNTDGPGAKQALLDTGVEIR 120
Query: 289 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 348
G + A G F LA + GA + + + ERA LA ++
Sbjct: 121 GSRMVVAGAGGAARAVAFQLA--------------ADGADITVINRTEERAVGLAREISA 166
Query: 349 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 398
A P +++L +L N T LGMHPNTD V+ E L VFD
Sbjct: 167 ADLPGKIRGTGLSGLKELL----RDADVLINTTTLGMHPNTDATIVTAEELHSGLTVFDI 222
Query: 399 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
VY P +TRLL++A +GA +SGV M + Q F L+TG E P E M++ VL
Sbjct: 223 VYNPLETRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGVEPPLELMKKTVL 275
>sp|P74591|AROE_SYNY3 Shikimate dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=aroE PE=3 SV=1
Length = 290
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 31/297 (10%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 226
I TK+ G+I PVGHS P++HN + + + YV P+ +DL + +
Sbjct: 4 ITGKTKLLGVIGYPVGHSLSPVMHNAALQAMASDYAYVAFPIAPEDLTIAIAGLGASGVQ 63
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAI 285
G SV P+K+ VM ++ A+ + AVNT+ R DG G NTD E
Sbjct: 64 GLSVTIPHKQVVMPLLTQITETARQVGAVNTLWR---DGHGWQGTNTDVE---------- 110
Query: 286 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 344
G+ +GR V+ G GGA RA+ G G +++ E+ A+
Sbjct: 111 ---GFLAPLLELKQDWSGRTAVILGYGGAARAVVVGLTQLGCPEIIVVGRSQEKLAQFAN 167
Query: 345 DVMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 394
P+E + P K ++L N+TP+GM P+ + P+ + E L +
Sbjct: 168 SWTDPKIKQALQVLPWEALSTVIP-KASLLINSTPVGMAPHPKQSPLDQSLVEKLPPTAI 226
Query: 395 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 451
+D +YTPR TR L+ A+ G + + G EM ++Q ++ +E P + MR+ +L
Sbjct: 227 AYDLIYTPRPTRFLQHAQERGLVTIDGAEMLVQQGAAALKIWLQQEVPVDVMRQALL 283
>sp|Q6LYQ2|AROE_METMP Shikimate dehydrogenase OS=Methanococcus maripaludis (strain S2 /
LL) GN=aroE PE=3 SV=1
Length = 278
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 156/294 (53%), Gaps = 25/294 (8%)
Query: 169 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 226
IN+ TK+ GLI PV HS PI+HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 227 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 286
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 287 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 346
K G + ++ G+GGA RA++F ++ + I + + E+A++L+ ++
Sbjct: 117 ----KTGILIN------KNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 347 MGAARPFEDILNF-----QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 400
+ E+ LN+ E I+ N TP+GM+P+T+ PV ++ +V D +Y
Sbjct: 166 SRKLKK-ENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIY 224
Query: 401 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 454
P + LK+A+ GA ++G+ M + Q F ++TG + M++ +++K
Sbjct: 225 NPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGIKPDIFVMKKSIISKI 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,251,008
Number of Sequences: 539616
Number of extensions: 7447875
Number of successful extensions: 22998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 21074
Number of HSP's gapped (non-prelim): 865
length of query: 454
length of database: 191,569,459
effective HSP length: 121
effective length of query: 333
effective length of database: 126,275,923
effective search space: 42049882359
effective search space used: 42049882359
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)