Query 012868
Match_columns 454
No_of_seqs 123 out of 1333
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 17:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 8E-104 3E-108 838.0 36.7 440 5-453 52-505 (546)
2 1kp8_A Groel protein; chaperon 100.0 2E-102 6E-107 829.4 40.4 442 5-453 52-507 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 2E-101 7E-106 821.6 43.6 442 5-453 52-509 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 2E-102 6E-107 829.6 34.4 443 5-453 53-509 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.9E-86 1E-90 709.6 28.4 418 5-453 61-570 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 5.5E-84 1.9E-88 689.2 36.8 388 5-453 61-503 (543)
7 3iyg_B T-complex protein 1 sub 100.0 1.4E-83 4.9E-88 682.1 39.3 387 5-453 54-495 (513)
8 3ko1_A Chaperonin; 9-fold symm 100.0 6.6E-84 2.2E-88 689.0 35.8 388 5-453 72-517 (553)
9 3iyg_H T-complex protein 1 sub 100.0 1.8E-83 6.1E-88 681.3 38.6 391 5-453 53-498 (515)
10 3aq1_B Thermosome subunit; gro 100.0 1.2E-83 4.2E-88 680.7 35.8 388 5-453 15-460 (500)
11 3p9d_A T-complex protein 1 sub 100.0 2.8E-84 9.7E-89 693.1 30.6 393 5-453 66-532 (559)
12 3p9d_D T-complex protein 1 sub 100.0 9.6E-84 3.3E-88 685.2 31.2 392 5-453 61-512 (528)
13 1q3q_A Thermosome alpha subuni 100.0 4.7E-83 1.6E-87 682.7 36.1 388 5-453 65-509 (548)
14 3iyg_E T-complex protein 1 sub 100.0 1.6E-82 5.5E-87 674.7 39.7 395 5-453 52-499 (515)
15 1a6d_A Thermosome (alpha subun 100.0 7E-83 2.4E-87 680.9 35.5 387 5-453 64-506 (545)
16 3iyg_D T-complex protein 1 sub 100.0 1.4E-82 4.8E-87 675.2 37.0 395 5-453 53-502 (518)
17 3iyg_A T-complex protein 1 sub 100.0 2E-82 6.9E-87 675.6 37.9 393 5-453 52-512 (529)
18 1a6d_B Thermosome (beta subuni 100.0 1.1E-82 3.6E-87 679.7 35.3 388 5-453 63-507 (543)
19 3iyg_Q T-complex protein 1 sub 100.0 5.9E-82 2E-86 670.0 38.1 394 5-453 53-496 (512)
20 3p9d_E T-complex protein 1 sub 100.0 8.3E-82 2.8E-86 674.5 32.7 394 5-453 87-542 (562)
21 3p9d_B T-complex protein 1 sub 100.0 1.1E-82 3.8E-87 677.7 24.7 387 5-453 60-502 (527)
22 3p9d_G T-complex protein 1 sub 100.0 1.1E-82 3.6E-87 679.8 24.4 390 5-453 66-511 (550)
23 3iyg_G T-complex protein 1 sub 100.0 8.4E-81 2.9E-85 661.2 38.3 388 5-453 51-498 (515)
24 3iyg_Z T-complex protein 1 sub 100.0 1.6E-80 5.4E-85 659.0 35.5 387 5-453 52-501 (517)
25 3p9d_F T-complex protein 1 sub 100.0 5.1E-80 1.7E-84 659.4 25.4 388 5-453 59-521 (546)
26 3p9d_H T-complex protein 1 sub 100.0 1.6E-79 5.5E-84 657.5 24.8 388 5-453 68-532 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.8E-51 6E-56 373.4 13.7 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 9E-50 3.1E-54 362.9 15.6 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.8E-40 1.3E-44 286.2 14.7 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.9E-21 6.3E-26 178.6 13.7 144 139-336 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 4.5E-18 1.5E-22 153.2 13.6 127 143-292 1-154 (159)
32 2lnd_A De novo designed protei 25.3 97 0.0033 23.7 4.6 33 181-213 35-67 (112)
33 2f6m_A Suppressor protein STP2 21.9 68 0.0023 23.6 3.0 23 340-362 13-35 (65)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7.9e-104 Score=837.97 Aligned_cols=440 Identities=33% Similarity=0.482 Sum_probs=411.0
Q ss_pred HHHHhhhccccCcc----ccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTT----GTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (454)
Q Consensus 5 ~~~il~~~~~~~p~----~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~ 79 (454)
..||||+|++.||+ ||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.
T Consensus 52 G~TIlk~i~v~hp~~n~gAkll------~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIGAELV------KEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEK 125 (546)
T ss_dssp ---------CCCHHHHHHHHHH------HHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHHHHHH------HHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 36899999999999 6666 5899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCCccceeEEEeeEEEeccccCCcccc
Q 012868 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (454)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~v~G~~~~~g~~~p~~~~ 159 (454)
++++|++++.|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|+++++..+++++++||+|+++|.||||++
T Consensus 126 a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt 204 (546)
T 3rtk_A 126 VTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204 (546)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCccccc
Confidence 999999999999999999999999998 8899999999999999999999998888778899999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchh
Q 012868 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (454)
Q Consensus 160 ~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (454)
++++|..+++||+|+++|.+|+++++++|+++++.++|+||||++++|++++|++|+.|+++|++++++||+|+||+.|+
T Consensus 205 ~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk 284 (546)
T 3rtk_A 205 DPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRK 284 (546)
T ss_dssp BTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHH
T ss_pred CcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012868 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (454)
Q Consensus 240 ~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s----~~l~ 315 (454)
++|+|||++|||++++++.+++++++++++||+|++|++++++|+|++||++++.++.|+++|++++++++| |+|+
T Consensus 285 ~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 364 (546)
T 3rtk_A 285 AMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQ 364 (546)
T ss_dssp HHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred hhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 012868 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (454)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~gvVpGGGaael~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (454)
|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|+++|.+|++|+ .++++|+|+++|++|
T Consensus 365 erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~A 443 (546)
T 3rtk_A 365 ERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVA 443 (546)
T ss_dssp HHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988 789999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 396 L~~~~~~La~NAG~d~~~v-~kl~~~~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
|+.||++||+|||+|+.++ ++|++. ..++|||+.+ ||++.|||||++||+++|++|+
T Consensus 444 Le~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~ 505 (546)
T 3rtk_A 444 LEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAA 505 (546)
T ss_dssp TTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHH
Confidence 9999999999999999999 999885 3559999988 9999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.7e-102 Score=829.44 Aligned_cols=442 Identities=34% Similarity=0.509 Sum_probs=429.1
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (454)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~ 79 (454)
..||||+|++.|| .||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 88887 5899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCCccceeEEEeeEEEeccccCCcccc
Q 012868 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (454)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~v~G~~~~~g~~~p~~~~ 159 (454)
++++|++++.|+++.++|.++|++|++++++|++++++|+.++++++.|+|++|+++.|++++++||+|+++|.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999998999999999999989999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchh
Q 012868 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (454)
Q Consensus 160 ~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (454)
++++|..+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+||++|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012868 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (454)
Q Consensus 240 ~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s----~~l~ 315 (454)
++|+|||++|||++++++.|++++++++++||+|++|++++++|+|++||++++.++.|+++|+.+++.++| |+|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 012868 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (454)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~gvVpGGGaael~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (454)
|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876689999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 396 L~~~~~~La~NAG~d~~~v-~kl~~~~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
|+.||++||+|||+|+.++ ++|++. +.++|||+.+ ||++.|||||++||+++|++|+
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~ 507 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA 507 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHH
Confidence 9999999999999999999 999875 4679999988 9999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.2e-101 Score=821.60 Aligned_cols=442 Identities=35% Similarity=0.526 Sum_probs=428.5
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (454)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~ 79 (454)
..||||+|++.|| .||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 88887 4899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCCccceeEEEeeEEEeccccCCcccc
Q 012868 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (454)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~v~G~~~~~g~~~p~~~~ 159 (454)
++++|++++.|+++.++|.+||++|++ +++|++++++|+.++++++.|++++|+++.|++++++||+|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999989999999999998 8999999999999999999999999999988789999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchh
Q 012868 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (454)
Q Consensus 160 ~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (454)
++++|..+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+||++|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012868 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (454)
Q Consensus 240 ~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s----~~l~ 315 (454)
++|+|||++|||++++++.|++++++++++||+|++|++++++++|++||++++.++.|+++|+.+++.++| |+|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHH
Q 012868 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (454)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~ 394 (454)
|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++.. ++++|+|+++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 395 ALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 395 AL~~~~~~La~NAG~d~~~v-~kl~~~-~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||+.||++||+|||+|+.++ .+|++. ++.++|||+.+ ||++.|||||++||+++|++|+
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAA 509 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHH
Confidence 99999999999999999999 999874 35679999988 9999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.8e-102 Score=829.55 Aligned_cols=443 Identities=36% Similarity=0.546 Sum_probs=387.5
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (454)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~ 79 (454)
..||||+|++.|| .||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3699999999999 88888 4799999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCCccceeEEEeeEEEeccccCCcccc
Q 012868 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (454)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~v~G~~~~~g~~~p~~~~ 159 (454)
++++|++++.|+++.++|.++|++|++++++|++++++|+.++++++.|+|++|+++.|++++++||+|+++|.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999989999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchh
Q 012868 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (454)
Q Consensus 160 ~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (454)
+|++|..+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||+|+||++|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012868 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (454)
Q Consensus 240 ~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s----~~l~ 315 (454)
++|+|||++|||++++++.+++++++++++||+|++|++++++|+|++||++++++++|+++|+.+++.++| |+|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999998999999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 012868 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (454)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~gvVpGGGaael~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (454)
|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876689999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 396 L~~~~~~La~NAG~d~~~v-~kl~~~~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
|+.||++||+|||+|+.++ ++|++.+++++|||+.+ ||++.|||||++||+++|++|+
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAA 509 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHH
Confidence 9999999999999999999 99987655789999988 9999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.9e-86 Score=709.60 Aligned_cols=418 Identities=12% Similarity=0.141 Sum_probs=346.5
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhh-cC-CCChHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~l-i~-G~~p~~I~~G~~~a~~~~~~ 82 (454)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.++ +. |+||+.|++||++|++.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 47899999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCcc----------------eeee--cCCCc
Q 012868 83 NLDCQARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (454)
Q Consensus 83 ~L~~~s~~v~~--~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~~~----------------I~v~--~g~~~ 136 (454)
+|++++.|++. .+.|.++|+||.++ ++.|++++++|+.++++++. |+++ .|+++
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 99999999873 68899999887643 67899999999999987642 3443 48777
Q ss_pred cceeEEEeeEEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHHHHHH-----------HH
Q 012868 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (454)
Q Consensus 137 ~d~~~~v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i~~~l-----------e~ 192 (454)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5899999999999888754 347999999999984 45666666655 67
Q ss_pred HHHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee
Q 012868 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (454)
Q Consensus 193 i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~ 272 (454)
+.++|.+|||+.++|+++++++|..|+ |+++ ++.++.+|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av-----~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVL-----RRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCC-----CCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceee-----ccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888886666666679999999999764 5554 4678889999999999999996 89999999999
Q ss_pred -eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcchHHHHHHHhhhc
Q 012868 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (454)
Q Consensus 273 -~~~v~---i~~~~~~~~~~~~~~~~--------------------------i~~ri~~l~~~~~~~~s~~l~eRla~l~ 322 (454)
|++|+ +++++|+|++||++++. ++.|+++|+++++.++|+- .+++++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~-~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHH-HHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHH-HHHHHhhc
Confidence 99996 68899999999999888 9999999999999888732 35589999
Q ss_pred CCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-CCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHH
Q 012868 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (454)
Q Consensus 323 g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~-gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~ 400 (454)
||+|||+|||+|+++++|+||+++||||++|+++++ |+|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 59999999999999999998764 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 401 ~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
++||+|||+|+.++ .+|++. +++++|||+.+ ||++.|||||++||+++|++|+
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 570 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAI 570 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHH
Confidence 99999999999999 999873 46789999988 9999999999999999999986
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=5.5e-84 Score=689.21 Aligned_cols=388 Identities=18% Similarity=0.243 Sum_probs=355.7
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-cc-----eeee--cCCCccceeEEEeeEE
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~-~~-----I~v~--~g~~~~d~~~~v~G~~ 147 (454)
|++++.|++ +.++|.++|++|+++ +++|++++++|+.+++++ |. |+|+ .|++. +++++++||+
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceE
Confidence 999999987 788999999999864 789999999999999986 64 7776 57776 4689999999
Q ss_pred EeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHHcCCCEEEE
Q 012868 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (454)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~-----------i~~~le~i~~~g~~lvii 203 (454)
|+++|.||||+. +++||+|+++|++ |+++++ +.++++++.++|+||||+
T Consensus 214 ~dk~~~~~~m~~-------~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMPK-------KVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSCS-------EEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCccccc-------cccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999999843 7899999999984 566665 667789999999999999
Q ss_pred ecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---c
Q 012868 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (454)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~---~ 280 (454)
+++|+++++++|..+ +|++|++ .++++|+|||++|||+++++ ++++++++||+|++|++. +
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARR-----VKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEee-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999999853 4789985 46788999999999999996 899999999999999865 8
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-
Q 012868 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (454)
Q Consensus 281 ~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g- 359 (454)
++|+|+++|++++ .+||+|||+|+++++|+||++|||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999998775 48999999999999999999999999999999999
Q ss_pred CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCccccccC--
Q 012868 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPAR-- 431 (454)
Q Consensus 360 vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~----~~~~~G~d~~~-- 431 (454)
+|||||++|++||.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 9999999999999999999875 899999999999999999999999999999999 999873 34679999988
Q ss_pred --CchhcCCccccccHHHHHhhhh
Q 012868 432 --DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 --dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||++||+++|++|+
T Consensus 480 ~~dm~~~gI~dp~~vk~~al~~A~ 503 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQAIQSAA 503 (543)
T ss_dssp EEETTTTTCEEEHHHHHHHHHHHH
T ss_pred cccHHHcCCEecHHHHHHHHHHHH
Confidence 9999999999999999999986
No 7
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.4e-83 Score=682.15 Aligned_cols=387 Identities=17% Similarity=0.204 Sum_probs=353.4
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeeec--CCCccceeEEEeeEE
Q 012868 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGMK 147 (454)
Q Consensus 84 L~~~s~~v~-----~~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~---~~I~v~~--g~~~~d~~~~v~G~~ 147 (454)
|++++.|++ +.++|.++|+||.+ ++++|++++++|+.+++++ +.|+++. |++.. ++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEE
Confidence 999999987 56889999987764 3578999999999999987 7788864 77665 589999999
Q ss_pred EeccccCCccccccccceeeecCcEEEEecc--------------ccCCHHHHHH-----------HHHHHHHcCCCEEE
Q 012868 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (454)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~--------------~i~~~~~i~~-----------~le~i~~~g~~lvi 202 (454)
|+++|.+| | +.+++||+|+++|+ +|++++++.+ +++++.++|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 3 34799999999997 4677777654 68899999999999
Q ss_pred EecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---Ee
Q 012868 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (454)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~---i~ 279 (454)
++++|+++++++|.. .+|+|||+|++. +|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~~~-----~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHADFV-----GVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCCHH-----HHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999998886 459999999753 5999999999999996 8999999999999997 78
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012868 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (454)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~- 358 (454)
+++++++.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999999998754 57999999999999999999999999999999998
Q ss_pred CCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC--
Q 012868 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR-- 431 (454)
Q Consensus 359 gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~-- 431 (454)
++|||||++|++|+++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999875 899999999999999999999999999999999 999874 45679999987
Q ss_pred --CchhcCCccccccHHHHHhhhh
Q 012868 432 --DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 --dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||++||+++|++|+
T Consensus 472 ~~d~~~~gI~dp~~vk~~al~~A~ 495 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQVLLSAA 495 (513)
T ss_pred ccchHhccCEecHHHHHHHHHHHH
Confidence 9999999999999999999986
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=6.6e-84 Score=689.02 Aligned_cols=388 Identities=19% Similarity=0.267 Sum_probs=356.3
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--cc-------eeee--cCCCccceeEEEe
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~~v~ 144 (454)
|++++.|++ +.++|.++|++|+++ +++|++++++|+.+++++ |. |+|+ .|+++ +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 788999999999985 679999999999999875 55 7776 57666 4789999
Q ss_pred eEEEeccccCCccccccccceeeecCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHHcCCCE
Q 012868 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~-----------i~~~le~i~~~g~~l 200 (454)
||+|+++|.||||+. +++||+|+++|+ +|+++++ +.++++++.++|+||
T Consensus 225 G~v~dk~~~~~~m~~-------~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMPK-------RLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSCS-------CCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCcc-------ccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 999999999999843 689999999998 4677776 567789999999999
Q ss_pred EEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe-
Q 012868 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (454)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~- 279 (454)
||++++|+++++++|..+ +|++|++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRRA-----KKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECCC-----CHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhhh-----hhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999853 47899864 6788999999999999996 899999999999999865
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012868 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (454)
Q Consensus 280 --~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~ 357 (454)
+++|+|++||++++ .+||+|||+|+++++|+||++|||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998774 489999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcC---C-CCcccccc
Q 012868 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQD---S-SDLGYNPA 430 (454)
Q Consensus 358 ~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~~---~-~~~G~d~~ 430 (454)
+| +|||||++|++|+.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.+ + .++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999999875 999999999999999999999999999999999 9998742 3 57999998
Q ss_pred C----CchhcCCccccccHHHHHhhhh
Q 012868 431 R----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 431 ~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
+ ||++.|||||++||+++|++|+
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~al~~A~ 517 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMNAIKAAT 517 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHHHHHHHH
T ss_pred cCCchHHHHhCccchhhhhhhhhhhcc
Confidence 8 9999999999999999999986
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-83 Score=681.31 Aligned_cols=391 Identities=14% Similarity=0.148 Sum_probs=353.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeee--cCCCccceeEEEeeE
Q 012868 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGM 146 (454)
Q Consensus 84 L~~~s~~v~--~----~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~---~~I~v~--~g~~~~d~~~~v~G~ 146 (454)
|++++.|++ + .+.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+ .|++.. ++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~-ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALE-ESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCcc-ceEEEeee
Confidence 999999984 5 5667999998774 4678999999999999876 678886 466664 68999999
Q ss_pred EEeccccCCccccccccceeeecCcEEEEecc-------------ccCCHHHH-----------HHHHHHHHHcCCCEEE
Q 012868 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVI-----------RQASLPCMMQGQSLLV 202 (454)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~i-----------~~~le~i~~~g~~lvi 202 (454)
+|+++|.||||.++|+ +++||+|+++|+ +|++++++ .++++++.++|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999987666 789999999998 46777775 5668999999999999
Q ss_pred EecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---
Q 012868 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--- 279 (454)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~--- 279 (454)
++++|++.++++|.. + +|+++++ .++.+|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 282 ~~~~I~dla~~~l~~---~---gI~~v~~-----~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD---R---DMFCAGR-----VPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH---c---CCccccc-----ccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999988887753 2 3677764 56788999999999999996 899999999999999754
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012868 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (454)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~- 358 (454)
+++|+||+||+++. .|||+|||+|+++++|+||+++||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~~-------------------------------~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKAK-------------------------------TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 78999999998763 5999999999999999999999999999999998
Q ss_pred CCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC--
Q 012868 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR-- 431 (454)
Q Consensus 359 gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~-- 431 (454)
++|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 69999999999999999999875 999999999999999999999999999999999 999874 34568999988
Q ss_pred --CchhcCCccccccHHHHHhhhh
Q 012868 432 --DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 --dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||+.||+++|++|+
T Consensus 475 ~~dm~~~gI~dp~~vk~~al~~A~ 498 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRINALTAAS 498 (515)
T ss_pred ccccHhccCEECHHHHHHHHHHHH
Confidence 9999999999999999999986
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-83 Score=680.74 Aligned_cols=388 Identities=17% Similarity=0.236 Sum_probs=326.4
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ + ++|++||+++||||||+|+||++||+++.+++. |+||+.|++||++|++.++++
T Consensus 15 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI--V----EVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH--H----HHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999 3 789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc--------eeee--cCCCccceeEEE
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~--~~--------I~v~--~g~~~~d~~~~v 143 (454)
|++++.|++ +.++|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|+++. +++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEE
Confidence 999999986 47899999997754 4678999999999999866 43 5666 788884 78999
Q ss_pred eeEEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCC
Q 012868 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (454)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~ 199 (454)
+||+|+++|.||||+. +++||+|+++|++ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999843 7899999999998 6667665 8999999999999
Q ss_pred EEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe
Q 012868 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (454)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~ 279 (454)
|||++++|+++++++|..|+ |+||+ +.++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999864 88997 457889999999999999996 899999999999999865
Q ss_pred ---cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHH
Q 012868 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (454)
Q Consensus 280 ---~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~ 356 (454)
+++|+|++||+++ +.|||+|||+|+++++|+||+++||||++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998754 579999999999999999999999999999999
Q ss_pred HcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccccc
Q 012868 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (454)
Q Consensus 357 ~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~ 430 (454)
++| +|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999875 899999999999999999999999999999999 999863 3457999998
Q ss_pred C----CchhcCCccccccHHHHHhhhh
Q 012868 431 R----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 431 ~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
+ ||++.|||||+.||+++|++|+
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~al~~A~ 460 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQAINAAM 460 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CCCccchHhcCCCCCHHHHHHHHHHHH
Confidence 8 9999999999999999999986
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.8e-84 Score=693.10 Aligned_cols=393 Identities=17% Similarity=0.252 Sum_probs=357.1
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----Ccc-----eeee--cCCCccceeEE
Q 012868 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (454)
Q Consensus 84 L~~-~s~~v~~--~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~-----~~~-----I~v~--~g~~~~d~~~~ 142 (454)
|++ ++.|++. .++|.++|++|+++ +++|++++++|+.++++ ++. |++. .|+++. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999986 68999999999999983 244 4443 388886 5899
Q ss_pred EeeEEEeccccCCccccccccceeeec--CcEEEEecccc-------------CCHHH-----------HHHHHHHHHHc
Q 012868 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (454)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~--~~~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~ 196 (454)
++||+|+++|.||||++ +++ ||+|+++|++| +++++ +.++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999864 677 99999999876 34433 68889999999
Q ss_pred CCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCc-CCCCCCCceeeeE
Q 012868 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (454)
Q Consensus 197 g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~-~~~~~~~LG~~~~ 275 (454)
|+||||++++|+++++++|..|+ |++|++ .++.+|+|||++|||+++++..++.+ +++++++||+|++
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~~-----~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVRR-----CKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEESS-----CCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEcc-----CCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999875 688874 56788999999999999998766655 8899999999999
Q ss_pred EE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHH
Q 012868 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (454)
Q Consensus 276 v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~ 352 (454)
|+ +++++|+|+.||+++ ++|||+|||+|+++++|+||+++||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999998754 57999999999999999999999999999
Q ss_pred HHHHHcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 012868 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (454)
Q Consensus 353 k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~--- 423 (454)
|+++++| +|||||++|++|+.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999875 899999999999999999999999999999999 999873 233
Q ss_pred ---------CccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 424 ---------DLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 424 ---------~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
++|||+.+ ||++.|||||++||+++|++|+
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 532 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSAL 532 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHH
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHH
Confidence 68999988 9999999999999999999986
No 12
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=9.6e-84 Score=685.24 Aligned_cols=392 Identities=15% Similarity=0.153 Sum_probs=354.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--Ccceeeec-------CCCccceeEEEeeE
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIFD-------RKALYNELNFVKGM 146 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~--~~~I~v~~-------g~~~~d~~~~v~G~ 146 (454)
|++++.|++ +.++|.++|++|+++ +++|++++++|+.++++ ++.|+++. |+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999998 788999999999975 57899999999999987 45555443 88885 58999999
Q ss_pred EEeccccCCccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHHHcCCCEEE
Q 012868 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (454)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~i~~~le~i~~~g~~lvi 202 (454)
+|+++|.|||| |+.+++||+|++++.+|+ +++ .+.++++++.++|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999995 334799999999998765 443 378899999999999999
Q ss_pred EecCc-----chhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 012868 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (454)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~ 277 (454)
++++| +++++++|..|+ |++||++ ++.+|+|||++|||+++++ ++++++++||+|++|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 999999998754 8899965 4678999999999999997 7899999999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012868 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (454)
Q Consensus 278 ---i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~ 354 (454)
+++++++++.+|.+.. .++.|||+|||+|+++++|+||+++||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567889998876321 146899999999999999999999999999999
Q ss_pred HHHcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccc
Q 012868 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (454)
Q Consensus 355 a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d 428 (454)
++++| +|||||++|++|+.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99999 9999999999999999999875 899999999999999999999999999999999 999874 35679999
Q ss_pred ccC----CchhcCCccccccHHHHHhhhh
Q 012868 429 PAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 429 ~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
+.+ ||++.|||||++||+++|++|+
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 512 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTSAITLAS 512 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHHHHHHHH
T ss_pred cCCCCccchHhccCeecHHHHHHHHHHHH
Confidence 988 9999999999999999999986
No 13
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.7e-83 Score=682.67 Aligned_cols=388 Identities=18% Similarity=0.267 Sum_probs=357.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 3789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--c-------ceeee--cCCCccceeEEEe
Q 012868 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (454)
Q Consensus 84 L~~~s~~v~~--~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~--~-------~I~v~--~g~~~~d~~~~v~ 144 (454)
|++++.|++. .++|.++|+||.+ +++.|++++++|+.+++++ | .|+|+ +|+++. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 9999999873 7899999998764 3578999999999999875 3 68887 898886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012868 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (454)
||+|+++|.||||+. +++||+|+++|.+ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMPK-------RVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSCS-------EESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCcc-------eecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 999999999999942 6899999999998 7778775 78899999999999
Q ss_pred EEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe-
Q 012868 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (454)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~- 279 (454)
||++++|+++++++|..|+ |+||++ .++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~~-----~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVRR-----VKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS-----CCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEcc-----CCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999874 889874 57889999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012868 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (454)
Q Consensus 280 --~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~ 357 (454)
+++|+|++||+++ +.|||+|||+|+++++|+||++|||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998865 4699999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC
Q 012868 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (454)
Q Consensus 358 ~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~ 431 (454)
+| +|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999875 899999999999999999999999999999999 999863 34679999988
Q ss_pred ----CchhcCCccccccHHHHHhhhh
Q 012868 432 ----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 ----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||+.||+++|++|+
T Consensus 484 g~~~d~~~~gI~dp~~vk~~al~~A~ 509 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQAIKSAS 509 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CCccchhhcCCEecHHHHHHHHHHHH
Confidence 9999999999999999999986
No 14
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-82 Score=674.73 Aligned_cols=395 Identities=17% Similarity=0.188 Sum_probs=352.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeee--cCCCccceeEEEe
Q 012868 84 LDCQARKITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (454)
Q Consensus 84 L~~~s~~v~~----~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~~v~ 144 (454)
|++++.|++. .++|.++|++|+++ .+.|++++++|+..+... +.|+++ .|+++. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 9999998853 58899999999985 357889999999988642 235554 588875 589999
Q ss_pred eEEEeccccCCcccccccc-ceeeecCcEEEE-----eccccCCHHHH-----------HHHHHHHHHcCCCEEEEecCc
Q 012868 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~-~~~~l~~~~Il~-----~d~~i~~~~~i-----------~~~le~i~~~g~~lvii~~~i 207 (454)
||+|+++|.||||+++.++ +...+++|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999987654 334556665544 34457888775 678999999999999999999
Q ss_pred chhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE-----ecce
Q 012868 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (454)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i-----~~~~ 282 (454)
+++++++|..|+ +.++++++ +.+|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v~-----k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWVG-----GPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEeccC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999876 67888764 578999999999999996 89999999999999986 4589
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012868 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (454)
Q Consensus 283 ~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vV 361 (454)
++||+||+++. .|||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998764 58999999999999999999999999999999999 99
Q ss_pred CCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCccccccC----
Q 012868 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPAR---- 431 (454)
Q Consensus 362 pGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~----~~~~~G~d~~~---- 431 (454)
||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999876 899999999999999999999999999999999 999863 34679999987
Q ss_pred CchhcCCccccccHHHHHhhhh
Q 012868 432 DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||++||+++|++|+
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~ 499 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLAT 499 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999986
No 15
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7e-83 Score=680.93 Aligned_cols=387 Identities=19% Similarity=0.254 Sum_probs=356.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 3789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------cceeee--cCCCccceeEEEee
Q 012868 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (454)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~---------~~I~v~--~g~~~~d~~~~v~G 145 (454)
|++++.| + +.++|.++|+||.+ +++.|++++++|+.+++++ +.|+|+ +|+++. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999999 7 78899999998754 3678999999999999865 368887 888886 5799999
Q ss_pred EEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012868 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (454)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (454)
|+|+++|.||||+. +++||+|+++|.+ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSCS-------EEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCcc-------eecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999942 6899999999998 6677665 788999999999999
Q ss_pred EEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe--
Q 012868 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT-- 279 (454)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~-- 279 (454)
|++++|+++++++|..|+ |+||++ .++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~~-----~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVRR-----VKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEECS-----CCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEecc-----CCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999875 889974 57889999999999999996 899999999999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012868 280 -MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (454)
Q Consensus 280 -~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~ 358 (454)
+++|+|+++|+++ +.|||+|||+|+++++|+||++|||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7899999998765 46999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012868 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (454)
Q Consensus 359 g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~- 431 (454)
| +|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999875 899999999999999999999999999999999 999863 34579999988
Q ss_pred ---CchhcCCccccccHHHHHhhhh
Q 012868 432 ---DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 ---dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||+.||+++|++|+
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~ 506 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAV 506 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred ccccchhcCccccHHHHHHHHHHHH
Confidence 9999999999999999999986
No 16
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-82 Score=675.25 Aligned_cols=395 Identities=16% Similarity=0.181 Sum_probs=347.7
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---Ccc-----eeee--cCCCccceeEEEee
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~~------~~l~~li~~A~~~vg~---~~~-----I~v~--~g~~~~d~~~~v~G 145 (454)
|++++.|++ +.++|.++|++|++++ ++|++++++|+.++++ ++. |+|+ .|++.. ++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~-ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTID-DCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChh-hheEecc
Confidence 999999998 7789999999999874 7899999999999985 454 6665 466664 6899999
Q ss_pred EEEeccccC--Cccccccccc--eeeecCcEEEEecc--ccCCHH-----------HHHHHHHHHHHcCCCEEEE-----
Q 012868 146 MKLEWGLKS--PYFFTHKNKK--ECVLDGALVLIYDT--KISNSN-----------VIRQASLPCMMQGQSLLVV----- 203 (454)
Q Consensus 146 ~~~~~g~~~--p~~~~~~~~~--~~~l~~~~Il~~d~--~i~~~~-----------~i~~~le~i~~~g~~lvii----- 203 (454)
|+|+++|.| |+++++++.. .+.++.|++. ++. +|++++ ++.++++++.++|+||||+
T Consensus 206 ~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~-~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~ 284 (518)
T 3iyg_D 206 LVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD-MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSIL 284 (518)
T ss_pred EEEecccccCCCccccCceEEEEEeeccccccc-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecccc
Confidence 999999998 5544333331 1233444443 233 245664 4678899999999999999
Q ss_pred ecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ec
Q 012868 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TM 280 (454)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i---~~ 280 (454)
+++|+++++++|..| +|+|||+|+++ +|+|||++|||+++++ ++++++++||+|++|++ ++
T Consensus 285 ~~~I~~~Al~~L~~~------~I~av~~~~~~-----~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~ 348 (518)
T 3iyg_D 285 RDALSDLALHFLNKM------KIMVVKDIERE-----DIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNG 348 (518)
T ss_pred ccCcCHHHHHHHHHc------CcEEEecCCHH-----HHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCC
Confidence 899999999999976 48999999754 5999999999999997 89999999999999975 44
Q ss_pred -ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC
Q 012868 281 -DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG 359 (454)
Q Consensus 281 -~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g 359 (454)
++++||++|+. ++++|||+|||+|+++++|+||+++||||++|+++++|
T Consensus 349 ~~~~~~~~g~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~ 398 (518)
T 3iyg_D 349 SGKLIKITGCAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKR 398 (518)
T ss_pred CceEEEEECCCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 67899999864 24679999999999999999999999999999999998
Q ss_pred -CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC--
Q 012868 360 -IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR-- 431 (454)
Q Consensus 360 -vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~-- 431 (454)
+|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 399 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 478 (518)
T 3iyg_D 399 ALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGG 478 (518)
T ss_pred CEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCc
Confidence 9999999999999999999875 899999999999999999999999999999999 999873 45679999987
Q ss_pred --CchhcCCccccccHHHHHhhhh
Q 012868 432 --DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 --dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||+.||+++|++|+
T Consensus 479 ~~d~~~~gI~dp~~vk~~al~~A~ 502 (518)
T 3iyg_D 479 ISNILEELVVQPLLVSVSALTLAT 502 (518)
T ss_pred ccchhhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999986
No 17
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-82 Score=675.61 Aligned_cols=393 Identities=16% Similarity=0.190 Sum_probs=353.5
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hP~akll--~----~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL--C----ELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 789999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCc-----c--eeee--cCCCccceeEE
Q 012868 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (454)
Q Consensus 84 L~~-~s~~v~--~~~~l~~va~~s~~------~~~~l~~li~~A~~~vg---~~~-----~--I~v~--~g~~~~d~~~~ 142 (454)
|++ ++.|++ +.+.|.++|+||++ ++++|++++++|+.+++ ++| . |+++ .|+++. ++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEE
Confidence 999 999987 67899999999975 36889999999999997 333 2 6664 577775 5899
Q ss_pred EeeEEEeccccCCccccccccceeeecCcEEEEecccc-------------CCHHH-----------HHHHHHHHHHcCC
Q 012868 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (454)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~g~ 198 (454)
++||+|+++|.||+|++ .++||+|++++.++ +++++ +.++++++.++|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999965 67899999999854 33432 6677889999999
Q ss_pred CEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCC-cCCCCCCCceeeeEEE
Q 012868 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (454)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~-~~~~~~~~LG~~~~v~ 277 (454)
||||++++|+++++++|..|+ |++||+ .++++|+|||++|||+++++..+++ .+++++++||+|++|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~-----v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRR-----VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------Cceecc-----CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999874 889985 5678899999999999999865544 3556788999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012868 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (454)
Q Consensus 278 ---i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~ 354 (454)
+++++|+||+||+++ +.|||+|||+|+++++|+||++|||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999876 3699999999999999999999999999999
Q ss_pred HHHcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 012868 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (454)
Q Consensus 355 a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~------ 422 (454)
++++| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +.
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99998 9999999999999999999876 899999999999999999999999999999999 999873 22
Q ss_pred --CCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 423 --SDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 423 --~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
.++|||+.+ ||++.|||||+.||+++|++|+
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~ 512 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFAT 512 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHH
Confidence 568999988 9999999999999999999986
No 18
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.1e-82 Score=679.71 Aligned_cols=388 Identities=19% Similarity=0.257 Sum_probs=356.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 3789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc-------eeee--cCCCccceeEEEe
Q 012868 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (454)
Q Consensus 84 L~~~s~~v~~--~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~~v~ 144 (454)
|++++.|++. .++|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|+++. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999874 6889999997754 3678999999999999876 52 7777 898886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012868 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (454)
||+|+++|.||||+. .++||+|+++|.+ |++++++ .++++++.++|+||
T Consensus 216 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMPD-------VVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSCS-------EEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCcc-------eecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 999999999999942 6899999999998 6777765 78899999999999
Q ss_pred EEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE--
Q 012868 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (454)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i-- 278 (454)
||++++|+++++++|..|+ |+||++ .++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVRR-----VKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS-----CCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEecc-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 889974 56789999999999999996 89999999999999986
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012868 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (454)
Q Consensus 279 -~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~ 357 (454)
++++|+|++||+++ +.|||+|||+|+++++|+||+++||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999998765 4699999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC
Q 012868 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (454)
Q Consensus 358 ~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~ 431 (454)
+| +|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 9999999999999999999864 899999999999999999999999999999999 999863 44679999988
Q ss_pred ----CchhcCCccccccHHHHHhhhh
Q 012868 432 ----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 ----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||+.||+++|++|+
T Consensus 482 g~~~d~~~~gI~dp~~vk~~al~~A~ 507 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQAIESAT 507 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CcccchhhcCceecHHHHHHHHHHHH
Confidence 9999999999999999999986
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.9e-82 Score=669.98 Aligned_cols=394 Identities=15% Similarity=0.205 Sum_probs=351.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-cceeee-------cCCCccceeEEEeeE
Q 012868 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (454)
Q Consensus 84 L~~~----s~~v~~~~~l~~va~~s~~~-----~~~l~~li~~A~~~vg~~-~~I~v~-------~g~~~~d~~~~v~G~ 146 (454)
|+++ +.++++.++|.++|++|+++ +++||+++++|+.+++++ +.|+++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56777889999999999986 688999999999999876 455544 38887 579999999
Q ss_pred EEeccccCCcccccccccee-eecCcE-EEEeccc----cCCHHHHHHH-------HH----HHHHcCCCEEEEecCcch
Q 012868 147 KLEWGLKSPYFFTHKNKKEC-VLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (454)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~-~l~~~~-Il~~d~~----i~~~~~i~~~-------le----~i~~~g~~lvii~~~i~~ 209 (454)
+|+++|.+ |+++.+..++ .+++|+ +..++.+ |++++++.++ |+ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 7775553333 456665 6666766 8889888877 55 888999999999999999
Q ss_pred hHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEE
Q 012868 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVII 286 (454)
Q Consensus 210 ~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~---~~~~~~~ 286 (454)
.++++|.. .+|+|||+|++++ |+|||++|||+++++ ++++++++||+|++|++. +++++++
T Consensus 284 la~~~l~k------~~I~av~~~~~~d-----le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNSKWD-----LRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCCHHH-----HHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99987764 4699999997544 999999999999996 899999999999999754 5688999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-CcCCch
Q 012868 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (454)
Q Consensus 287 ~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vVpGGG 365 (454)
.+|+. +|++|||+|||+|+++++|+||+++||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 88753 35789999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCcccccc----C--Cch
Q 012868 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA----R--DMF 434 (454)
Q Consensus 366 aael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~----~--dm~ 434 (454)
++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+. . ||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 9999999999999875 899999999999999999999999999999999 999873 4678999998 2 999
Q ss_pred hcCCccccccHHHHHhhhh
Q 012868 435 KCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 435 ~~gI~Dp~~vk~~al~~A~ 453 (454)
+.|||||++||+++|++|+
T Consensus 478 ~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred hccCeEcHHHHHHHHHHHH
Confidence 9999999999999999986
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=8.3e-82 Score=674.45 Aligned_cols=394 Identities=19% Similarity=0.220 Sum_probs=346.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCH------HHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeee--cCCCccceeEE
Q 012868 84 LDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (454)
Q Consensus 84 L~~~s~~v~~~------~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~~ 142 (454)
|++++.|+++. ++|.++|+||+++ .+.|++++++|+..+.+. +.|.++ .|+++. ++++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhce
Confidence 99999988632 6899999999975 357999999999988652 245565 588886 4799
Q ss_pred EeeEEEeccccCCccccccccceeeecCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHHcCC
Q 012868 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQ 198 (454)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~-----------i~~~le~i~~~g~ 198 (454)
++||+|+++|.||||+++.+ .+..+++|+|++++. +|+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999988651 011124445444432 4666665 6789999999999
Q ss_pred CEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE
Q 012868 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (454)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i 278 (454)
||||++++|+++++++|..|+ |.+|++++ +++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~------I~~v~~v~-----k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQND------LPAVRWVG-----GQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTT------CCCEECCC-----TTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCC------CEEEeccC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 999999999999999999876 56788764 567999999999999996 89999999999999987
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHH
Q 012868 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (454)
Q Consensus 279 -----~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k 353 (454)
++++++||+||+++. .|||+|||+|+++++|+||+++||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999998764 58999999999999999999999999999
Q ss_pred HHHHcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCcc
Q 012868 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (454)
Q Consensus 354 ~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~----~~~~~G 426 (454)
+++++| +|||||++|++|+++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999999875 899999999999999999999999999999999 999863 456799
Q ss_pred ccccC----CchhcCCccccccHHHHHhhhh
Q 012868 427 YNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 427 ~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||+.+ ||++.|||||++||+++|++|+
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 542 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQQILLAT 542 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHHHHHHHH
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHH
Confidence 99987 9999999999999999999986
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.1e-82 Score=677.66 Aligned_cols=387 Identities=19% Similarity=0.217 Sum_probs=351.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~--G~~p~~I~~G~~~a~~~~~~ 82 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999997 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc---ceeee--cCCCccceeEEEeeE
Q 012868 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYNELNFVKGM 146 (454)
Q Consensus 83 ~L~~~s~~v~~-----~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~~---~I~v~--~g~~~~d~~~~v~G~ 146 (454)
+|++++.|+++ .++|.++|++|+++ ++.||+++++|+.++++++ .|+|+ .|+++. ++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeE
Confidence 99999999985 68899999999986 5789999999999999886 78887 477765 58999999
Q ss_pred EEeccccCCccccccccceeeecCcEEEEeccc--------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012868 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (454)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~--------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (454)
+||++|.||| |+ .++||+|++++.+ +++++++ .+.++++.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 33 4689999987654 4555554 578899999999999
Q ss_pred EEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---E
Q 012868 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (454)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~---i 278 (454)
|++++|+++++++|..|+ |++||+|++ .+|+|||++|||+++++ ++++++++||+|++|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~~-----~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHADF-----EGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCHH-----HHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCCH-----HHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999864 889998864 45999999999999996 7999999999999997 6
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012868 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (454)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~ 358 (454)
++++++++.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999998754 57999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012868 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (454)
Q Consensus 359 g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~- 431 (454)
| +|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999999875 899999999999999999999999999999999 999874 45689999988
Q ss_pred ---CchhcCCccccccHHHHHhhhh
Q 012868 432 ---DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 ---dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||++.|||||++||+++|++|+
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~ 502 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSAS 502 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHH
T ss_pred CCcchHhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999986
No 22
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.1e-82 Score=679.77 Aligned_cols=390 Identities=16% Similarity=0.164 Sum_probs=349.7
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4799999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC-----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------cceeeecCCCccceeEEEee
Q 012868 84 LDCQARKITT-----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (454)
Q Consensus 84 L~~~s~~v~~-----~~~l~~va~~s~~------~~~~l~~li~~A~~~vg~-~------~~I~v~~g~~~~d~~~~v~G 145 (454)
|++++.|++. .++|.++|+||++ ++++|++++++|+.++++ + +.+++ +|+++.| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccc-eeEEee
Confidence 9999999863 5689999999864 367899999999999984 3 34444 4888865 599999
Q ss_pred EEEeccccCCccccccccceeeecCcEEEEeccc-------------cCCHHHHHH-----------HHHHHHHcCCCEE
Q 012868 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLL 201 (454)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~i~~-----------~le~i~~~g~~lv 201 (454)
|+|+++|.||||.+.|+ .++||+|+++|++ |++++++.+ +++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999988766 4899999999987 456655554 6778999999999
Q ss_pred EEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---
Q 012868 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (454)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i--- 278 (454)
|++++|++.++++|.. .+|+++++ .++.+|+|||++|||+++++ ++++++++||+|++|++
T Consensus 294 i~~~~I~dla~~~L~~------~gI~~v~~-----v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFAD------RNIFCAGR-----VSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGG------GTCEEEEC-----CCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHH------cCCccccC-----cCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 9999999999886663 34788875 45678999999999999996 89999999999999975
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012868 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (454)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~ 358 (454)
++++++++.||+++ +.|||+|||+|+++++|+||+++||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 68899999998765 46999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCccccccC-
Q 012868 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR- 431 (454)
Q Consensus 359 g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~G~d~~~- 431 (454)
| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 9999999999999999999765 999999999999999999999999999999999 999873 45689999988
Q ss_pred ---CchhcCCccccccHHHHHhhhh
Q 012868 432 ---DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 432 ---dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
||+++|||||++||+++|++|+
T Consensus 487 ~~~dm~~~gI~dp~~vk~~al~~A~ 511 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKINALNSAT 511 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHHHHHHHH
T ss_pred cccchHhccCEecHHHHHHHHHHHH
Confidence 9999999999999999999986
No 23
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.4e-81 Score=661.22 Aligned_cols=388 Identities=11% Similarity=0.149 Sum_probs=347.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ + ++|++||+++||||||+|+||++||++|++++. |+||+.|++||++|++.++++
T Consensus 51 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM--I----EISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--c--------ceeee--cCCCccceeEEE
Q 012868 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (454)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~--~--------~I~v~--~g~~~~d~~~~v 143 (454)
|++++.|++ +.+.|.++|++|+++ .+.+++++++|+..+.++ + .|.++ +|+++. +++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEE
Confidence 999999987 368899999999874 235678999999888622 2 14554 588875 68999
Q ss_pred eeEEEeccccCCccccccccceeeecCcEEEEecc-------------ccCCHHHHHHHHH-----------HHHHcCCC
Q 012868 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (454)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~i~~~le-----------~i~~~g~~ 199 (454)
+||+|+++|.||.|+ .+++||+|+++|+ +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999764 4789999999998 5788888888887 88899988
Q ss_pred EEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-eeEEEE
Q 012868 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (454)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~-~~~v~i 278 (454)
|||++++|++.++++|..+ +|+|++ +.++.+|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMRA------NITAIR-----RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHHC------Cceeec-----cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 8888899999999988853 478876 467789999999999999996 89999999999 999975
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHH
Q 012868 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (454)
Q Consensus 279 ---~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a~k~a 355 (454)
++++|+||+||+++. .|||+|||+|+++++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999998764 5999999999999999999999999999999
Q ss_pred HHc-CCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCcccc
Q 012868 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (454)
Q Consensus 356 ~~~-gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~----~~~~~G~d 428 (454)
+++ ++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 976 69999999999999999999875 999999999999999999999999999999999 999874 24578999
Q ss_pred ccC----CchhcCCccccccHHHHHhhhh
Q 012868 429 PAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 429 ~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
+.+ ||++.|||||+.||+++|++|+
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~al~~A~ 498 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQTYKTAV 498 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHHHHHHHH
Confidence 988 9999999999999999999986
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-80 Score=659.02 Aligned_cols=387 Identities=18% Similarity=0.235 Sum_probs=340.2
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|++.||+||++ +++|++||+++||||||+++||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc------ceeee--cCCCccceeEEEeeEEE
Q 012868 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (454)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~~------~I~v~--~g~~~~d~~~~v~G~~~ 148 (454)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+++ .|.+. .|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999988 788999999999875 3568888888888775432 23333 56666 47899999999
Q ss_pred eccccCCccccccccceeeecCcEEEEecccc-------------CCHHHHHH-----------HHHHHHH--------c
Q 012868 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNVIRQ-----------ASLPCMM--------Q 196 (454)
Q Consensus 149 ~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i-------------~~~~~i~~-----------~le~i~~--------~ 196 (454)
+++|.||||+ .+++||+|+++|.+| ++++++.+ .++.+.. +
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999874 378999999999875 33333322 3334433 3
Q ss_pred CCCEEEEe-cCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCC-ceeee
Q 012868 197 GQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (454)
Q Consensus 197 g~~lvii~-~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~-LG~~~ 274 (454)
++|+||++ ++|+++++++|..+ +|++|+++ ++.+|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 56777665 89999999999875 47899975 4578999999999999996 89999999 99999
Q ss_pred EE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHH
Q 012868 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (454)
Q Consensus 275 ~v---~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~a 351 (454)
| .+++++++|+++|++++ .|||+|||+|+++++|+||++|||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 57899999999998775 379999999999999999999999999
Q ss_pred HHHHHHcC-CcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCc
Q 012868 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (454)
Q Consensus 352 ~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~---~~~~~ 425 (454)
+|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.+|++||+|||+|+.++ .+|++. ++.++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999885 999999999999999999999999999999999 999874 45679
Q ss_pred cccccC----CchhcCCccccccHHHHHhhhh
Q 012868 426 GYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 426 G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
|||+.+ ||++.|||||+.||+++|++|+
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 501 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCT 501 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHHHHHHHH
Confidence 999988 9999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.1e-80 Score=659.40 Aligned_cols=388 Identities=17% Similarity=0.229 Sum_probs=336.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 59 G~tIlk~i~v~hP~akll--~----e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI--A----RAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH--H----HHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH--H----HHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 789999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeee--cCCCccceeEEEe
Q 012868 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (454)
Q Consensus 84 L~~~s~~v~----~~~~l~~va~~s~~~------~~~l~~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~~v~ 144 (454)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. ..|.+. .|++. +++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~-~ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP-KDTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT-TTCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc-cccEEEe
Confidence 999999884 678999999999985 457999999999888631 124443 57766 4689999
Q ss_pred eEEEeccccCCccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHH-----
Q 012868 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMM----- 195 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~-----------i~~~le~i~~----- 195 (454)
||+|+++|.||+|+ .+++||+|+++|++++ ++++ +...++.+..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999763 4789999999987643 2221 2233444443
Q ss_pred ----cCCCEEEE-ecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCc
Q 012868 196 ----QGQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (454)
Q Consensus 196 ----~g~~lvii-~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~L 270 (454)
+|+|+||+ +++|+++++++|..|+ |++||++ ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 56785655 5699999999999875 7899875 4568999999999999996 899999999
Q ss_pred eeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHH
Q 012868 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (454)
Q Consensus 271 G~~~~v---~i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~D 347 (454)
|+|++| .+++++|+|++||++++ .|||+|||+|+++++|+||+++|
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 57899999999998774 48999999999999999999999
Q ss_pred HHHHHHHHHHcC-CcCCchHHHHHHHHHHHH---HcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 012868 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (454)
Q Consensus 348 Al~a~k~a~~~g-vVpGGGaael~~s~~L~~---~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~- 420 (454)
|||++|+++++| +|||||++|+++|.+|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999998 999999999999999998 5665 999999999999999999999999999999999 999863
Q ss_pred -------CCCCccccccC----CchhcCCccccccHHHHHhhhh
Q 012868 421 -------DSSDLGYNPAR----DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 421 -------~~~~~G~d~~~----dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
++.++|||+.+ ||++.|||||+.||+++|++|+
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 521 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGAT 521 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHH
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHH
Confidence 44579999988 9999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-79 Score=657.52 Aligned_cols=388 Identities=15% Similarity=0.158 Sum_probs=345.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012868 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (454)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~ 83 (454)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.++++
T Consensus 68 G~TIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL--V----MATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH--H----HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH--H----HHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 3 789999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----c-------ceeeec--CCCcccee
Q 012868 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIFD--RKALYNEL 140 (454)
Q Consensus 84 L~~~s~~v----~~~~~l~~va~~s~~-----~~~~l~~li~~A~~~vg~~-----~-------~I~v~~--g~~~~d~~ 140 (454)
|++++.++ ++.++|.++|++|++ ++++|++++++|+.+++++ + .|+|+. |+++. ++
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NS 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GC
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hh
Confidence 99999876 567899999999874 2578999999999999874 3 467764 88886 47
Q ss_pred EEEeeEEEeccccCCccccccccceeeec---CcEEEEeccc-------------cCCHHHHHH-----------HHHHH
Q 012868 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (454)
Q Consensus 141 ~~v~G~~~~~g~~~p~~~~~~~~~~~~l~---~~~Il~~d~~-------------i~~~~~i~~-----------~le~i 193 (454)
++++||+|+++|. .| ..+++ ||+|++++++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999983 23 33567 9999999987 667777665 67889
Q ss_pred HHcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceee
Q 012868 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (454)
Q Consensus 194 ~~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~ 273 (454)
.++|+||||++++|+++++++|..+ +|+|||+|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 9999999999999999999999876 489999985 456999999999999996 899999999999
Q ss_pred eEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHH
Q 012868 274 KRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (454)
Q Consensus 274 ~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~~r~i~DAl~ 350 (454)
++|++ ++++++||++|+. |+++.|||+|||+|+++++|+||++|||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 99864 5689999999862 134679999999999999999999999999
Q ss_pred HHHHHHH--c-CCcCCchHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 012868 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (454)
Q Consensus 351 a~k~a~~--~-gvVpGGGaael~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~~~~~La~NAG~d~~~v-~kl~~~----- 420 (454)
++|++++ + ++|||||++|++||.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 69999999999999999999875 899999999999999999999999999999999 999874
Q ss_pred ------CCCCccccccC-------CchhcCCccccccHHHHHhhhh
Q 012868 421 ------DSSDLGYNPAR-------DMFKCGDVDPLKHVPSEFAKAT 453 (454)
Q Consensus 421 ------~~~~~G~d~~~-------dm~~~gI~Dp~~vk~~al~~A~ 453 (454)
++.++|||+.+ ||++.|||||+.||+++|++|+
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~ 532 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVAT 532 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHH
Confidence 23578999843 8999999999999999999986
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-51 Score=373.44 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.5
Q ss_pred eEEEeeEEEeccccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcc
Q 012868 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (454)
Q Consensus 140 ~~~v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~ 219 (454)
+++++||.||+||+||||++++++|.++|+||+||++|.||+++++++|+||++.++|+||+|++++++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 012868 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (454)
Q Consensus 220 ~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri 299 (454)
++|.+++||||+|+|||+|++.|+|||.+|||++++++.|+++++++.++||+|++|.+++|+|++++|.++++.|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcch----HHHHHHHhhhcCCeEEE
Q 012868 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (454)
Q Consensus 300 ~~l~~~~~~~~s----~~l~eRla~l~g~~atI 328 (454)
++|+++++.++| |||+||||||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 99999999999999875
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=9e-50 Score=362.95 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=181.2
Q ss_pred EeeEEEeccccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCC
Q 012868 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (454)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~ 222 (454)
.+||.||+||+||||++++++|.++|+||+||++|.||+++++++|+||.+.++|+||+||+++++++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 012868 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (454)
Q Consensus 223 ~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~l 302 (454)
.+++||||+|+|||+|+..|+|||.+|||++++++.|+++++++.++||+|++|++++|+|+++.|.++++.|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcch----HHHHHHHhhhcCCeEE
Q 012868 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (454)
Q Consensus 303 ~~~~~~~~s----~~l~eRla~l~g~~at 327 (454)
+++++.++| |||+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999988 9999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3.8e-40 Score=286.18 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=142.1
Q ss_pred eEEEeccccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhHHHHHHhcccCCCc
Q 012868 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (454)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~~l~~n~~~~~~ 224 (454)
||.||+||+||||++++++|.++++||+||++|+||+++++++|+||++.++|+||+|++++++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcC
Q 012868 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (454)
Q Consensus 225 ~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~ 288 (454)
+++|||+|+|||+|++.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.86 E-value=1.9e-21 Score=178.61 Aligned_cols=144 Identities=10% Similarity=0.167 Sum_probs=118.5
Q ss_pred eeEEEeeEEEeccccCCccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHH
Q 012868 139 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 194 (454)
Q Consensus 139 ~~~~v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~i~~~le~i~ 194 (454)
++++++|++|++++.+|.|++ .++||+|++++.+++ +++ .+...+++|.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMRR-------YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSCC-------EEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCCc-------ccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999998886643 689999999997643 222 2456678899
Q ss_pred HcCCCEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-e
Q 012868 195 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 273 (454)
Q Consensus 195 ~~g~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~-~ 273 (454)
++|+++|+++++|++.++++|..+ +|++|++. ++++|+|||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999998875 48999975 4678999999999999996 89999999999 9
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCcHh
Q 012868 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (454)
Q Consensus 274 ~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~~~~~~s~~l~eRla~l~g~~atI~vrG~t~~ 336 (454)
+.|+ +++++++||+||++++ .|||+|||+|.+
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 9886 5788999999998764 589999999875
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.76 E-value=4.5e-18 Score=153.18 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=107.0
Q ss_pred EeeEEEeccccCCccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHHcCC
Q 012868 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (454)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~-----------i~~~le~i~~~g~ 198 (454)
++|++|++++.+|.|++ .++||+|++++.+++ ++++ +...+++|.++|+
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999987643 679999999998653 3333 4566888999999
Q ss_pred CEEEEecCcchhHHHHHHhcccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE-
Q 012868 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (454)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~ledla~~tGa~i~~~~~~~~~~~~~~~~LG~~~~v~- 277 (454)
++|+++++|++.++++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999988874 48999975 4678999999999999996 8999999999999986
Q ss_pred --EecceEEEEcCCCCh
Q 012868 278 --ATMDNVVIIGGSGEL 292 (454)
Q Consensus 278 --i~~~~~~~~~~~~~~ 292 (454)
++++++++|+||++-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578899999999754
No 32
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.32 E-value=97 Score=23.74 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCcchhHHH
Q 012868 181 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLG 213 (454)
Q Consensus 181 ~~~~~i~~~le~i~~~g~~lvii~~~i~~~al~ 213 (454)
.+.+++..+++..++.|+||+++-.+-+..-.+
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvn 67 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVN 67 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHH
Confidence 456789999999999999999776655443333
No 33
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=21.87 E-value=68 Score=23.62 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcC
Q 012868 340 EKKLKITNALHAVQAAKEEGIVP 362 (454)
Q Consensus 340 E~~r~i~DAl~a~k~a~~~gvVp 362 (454)
-.+.+++|++.+.-.|++.|.++
T Consensus 13 Aed~AieDaiy~L~~aL~~g~I~ 35 (65)
T 2f6m_A 13 AQDYALTDTIEALSRMLHRGTIP 35 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 34679999999999999999774
Done!