Query         012872
Match_columns 454
No_of_seqs    195 out of 2426
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 07:11:28 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012872.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012872hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.2E-68 2.5E-73  499.5  38.5  384   52-448    25-435 (489)
  2 PLN02302 ent-kaurenoic acid ox 100.0 3.7E-66 8.1E-71  500.1  46.7  416   32-448    21-436 (490)
  3 PLN02500 cytochrome P450 90B1  100.0 1.3E-65 2.7E-70  494.2  40.9  371   52-430    37-412 (490)
  4 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-65 3.6E-70  489.4  38.0  381   53-448    31-413 (463)
  5 PLN02971 tryptophan N-hydroxyl 100.0 6.2E-65 1.3E-69  493.2  41.1  390   50-448    54-479 (543)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 8.5E-65 1.9E-69  466.0  35.0  380   54-448    32-443 (499)
  7 PLN02196 abscisic acid 8'-hydr 100.0 3.4E-64 7.4E-69  479.9  38.7  378   51-448    33-411 (463)
  8 PLN03141 3-epi-6-deoxocathaste 100.0 5.7E-64 1.2E-68  477.8  39.3  393   49-448     3-400 (452)
  9 PLN02290 cytokinin trans-hydro 100.0 8.5E-63 1.8E-67  478.0  41.8  386   53-448    42-462 (516)
 10 PLN02183 ferulate 5-hydroxylas 100.0 6.2E-63 1.3E-67  477.7  39.3  384   52-448    35-454 (516)
 11 PLN02687 flavonoid 3'-monooxyg 100.0 4.9E-62 1.1E-66  471.6  40.5  385   52-448    33-451 (517)
 12 PLN03234 cytochrome P450 83B1; 100.0 5.2E-62 1.1E-66  471.0  37.9  367   52-431    27-419 (499)
 13 PLN02987 Cytochrome P450, fami 100.0 3.9E-61 8.5E-66  457.2  41.4  388   50-448    27-418 (472)
 14 PLN00168 Cytochrome P450; Prov 100.0 3.3E-61 7.1E-66  466.1  40.6  373   50-430    32-436 (519)
 15 PLN02966 cytochrome P450 83A1  100.0 8.8E-62 1.9E-66  468.5  36.0  386   52-448    28-442 (502)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 4.4E-62 9.6E-67  465.0  32.7  389   52-452    34-444 (497)
 17 PLN00110 flavonoid 3',5'-hydro 100.0 5.7E-61 1.2E-65  461.4  39.3  384   52-448    30-442 (504)
 18 PTZ00404 cytochrome P450; Prov 100.0   1E-61 2.2E-66  467.0  32.8  378   52-448    28-429 (482)
 19 PLN03112 cytochrome P450 famil 100.0 7.1E-61 1.5E-65  464.4  38.7  371   48-429    27-424 (514)
 20 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-60   3E-65  461.5  36.8  385   52-448    29-445 (503)
 21 PLN03018 homomethionine N-hydr 100.0 7.7E-60 1.7E-64  454.2  40.1  370   51-430    38-443 (534)
 22 PF00067 p450:  Cytochrome P450 100.0 3.2E-61   7E-66  464.9  29.4  385   55-451     1-412 (463)
 23 PLN03195 fatty acid omega-hydr 100.0 2.1E-59 4.5E-64  454.0  36.6  384   54-448    31-463 (516)
 24 PLN02655 ent-kaurene oxidase   100.0 2.5E-59 5.3E-64  447.3  35.7  377   55-448     1-410 (466)
 25 PLN02169 fatty acid (omega-1)- 100.0 5.6E-59 1.2E-63  446.6  38.1  379   54-448    32-447 (500)
 26 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-59 3.1E-64  421.3  29.3  387   51-448    48-465 (519)
 27 PLN02738 carotene beta-ring hy 100.0 3.7E-58   8E-63  447.1  35.5  344   74-429   148-517 (633)
 28 KOG0684 Cytochrome P450 [Secon 100.0 1.1E-57 2.3E-62  399.1  31.5  363   53-431    31-407 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.7E-56 3.8E-61  429.5  35.7  365   53-430    12-406 (489)
 30 PLN02426 cytochrome P450, fami 100.0   1E-53 2.2E-58  409.6  39.7  365   61-448    49-445 (502)
 31 PLN02648 allene oxide synthase 100.0 4.8E-55   1E-59  412.2  26.2  362   49-430    13-406 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.7E-49   1E-53  367.4  29.7  316   79-428    24-346 (411)
 33 KOG0158 Cytochrome P450 CYP3/C  70.9     3.1 6.7E-05   40.1   2.4   15  411-426   410-424 (499)
 34 PF12508 DUF3714:  Protein of u  67.3     1.9 4.1E-05   35.7   0.2   44  360-404    51-94  (200)
 35 PF05952 ComX:  Bacillus compet  56.7      12 0.00026   23.7   2.3   23  320-342     4-26  (57)
 36 PF15050 SCIMP:  SCIMP protein   55.6      46   0.001   24.7   5.4   18   50-67     65-83  (133)
 37 PF15176 LRR19-TM:  Leucine-ric  54.9      42  0.0009   24.1   4.9   28   10-38     14-41  (102)
 38 PF12554 MOZART1:  Mitotic-spin  54.6      48   0.001   20.3   4.8   42  298-339     6-47  (48)
 39 PRK06789 flagellar motor switc  48.5      24 0.00051   23.9   2.8   39  367-405    21-62  (74)
 40 TIGR03779 Bac_Flav_CT_M Bacter  44.6     6.1 0.00013   36.8  -0.5   44  361-405   255-298 (410)
 41 PF00067 p450:  Cytochrome P450  44.6      12 0.00025   35.8   1.4   37  409-448   376-412 (463)
 42 PRK00523 hypothetical protein;  43.8      78  0.0017   21.2   4.6   26   11-37      3-28  (72)
 43 PLN02169 fatty acid (omega-1)-  43.1      16 0.00035   35.8   2.1   36  417-452   405-448 (500)
 44 PRK01844 hypothetical protein;  41.0      96  0.0021   20.8   4.7   26   12-38      3-28  (72)
 45 COG3763 Uncharacterized protei  38.8 1.1E+02  0.0023   20.5   4.5   25   12-37      3-27  (71)
 46 KOG0684 Cytochrome P450 [Secon  38.7      19 0.00041   34.0   1.7   41  407-448   389-431 (486)
 47 PLN03234 cytochrome P450 83B1;  38.7      19  0.0004   35.3   1.8   37  411-448   405-441 (499)
 48 COG3952 Predicted membrane pro  36.6      96  0.0021   22.5   4.4   76    1-81      6-83  (113)
 49 PF11138 DUF2911:  Protein of u  36.3      55  0.0012   25.7   3.6   40  386-426    53-99  (145)
 50 PF15330 SIT:  SHP2-interacting  36.3      96  0.0021   22.9   4.7   11   60-70     45-55  (107)
 51 KOG3506 40S ribosomal protein   36.1      22 0.00049   22.1   1.1   13  439-451    12-24  (56)
 52 PF08114 PMP1_2:  ATPase proteo  36.1      47   0.001   19.2   2.3    8   39-46     31-38  (43)
 53 PLN02394 trans-cinnamate 4-mon  34.5      27 0.00059   34.2   2.2    6  411-416   414-419 (503)
 54 PLN02500 cytochrome P450 90B1   34.3      25 0.00055   34.3   1.9   16  410-426   398-413 (490)
 55 KOG0157 Cytochrome P450 CYP4/C  34.0      24 0.00051   34.6   1.7   33  412-448   410-443 (497)
 56 PLN00110 flavonoid 3',5'-hydro  33.9      31 0.00067   33.9   2.5   11  412-423   406-416 (504)
 57 PLN02936 epsilon-ring hydroxyl  33.0      30 0.00066   33.8   2.2   37  411-448   393-429 (489)
 58 PF14550 Peptidase_U35_2:  Puta  32.1      33 0.00072   25.9   1.8   32  383-417    71-102 (122)
 59 PLN02290 cytokinin trans-hydro  31.9      19 0.00041   35.4   0.7   36  417-452   424-463 (516)
 60 PF05261 Tra_M:  TraM protein,   31.7 2.3E+02   0.005   21.5   7.7   92  252-343    11-121 (127)
 61 cd07922 CarBa CarBa is the A s  30.8      96  0.0021   21.5   3.7   30  318-347     6-35  (81)
 62 COG0851 MinE Septum formation   30.3   1E+02  0.0022   21.6   3.7   19  328-346    35-53  (88)
 63 PLN00168 Cytochrome P450; Prov  29.6      36 0.00079   33.5   2.2   14  411-425   423-436 (519)
 64 cd03742 SOCS_Rab40 SOCS (suppr  29.4   1E+02  0.0023   18.3   3.1   25  329-363     4-28  (43)
 65 PF14483 Cut8_M:  Cut8 dimerisa  29.0      93   0.002   17.9   2.9   20  318-337    15-35  (38)
 66 PLN03112 cytochrome P450 famil  28.7      37  0.0008   33.4   2.0   37  411-448   412-450 (514)
 67 COG4459 NapE Periplasmic nitra  28.6 1.6E+02  0.0034   18.6   4.5   19   36-60     43-61  (62)
 68 PTZ00404 cytochrome P450; Prov  27.9      32 0.00069   33.5   1.4   14  439-452   417-430 (482)
 69 PLN02987 Cytochrome P450, fami  27.5      52  0.0011   32.0   2.8   13  440-452   407-419 (472)
 70 PF13893 RRM_5:  RNA recognitio  27.4 1.2E+02  0.0026   18.7   3.6   35   84-120     2-40  (56)
 71 PF08776 VASP_tetra:  VASP tetr  26.9 1.4E+02   0.003   17.4   3.2   15  329-343    10-24  (40)
 72 PLN02966 cytochrome P450 83A1   26.9      35 0.00075   33.5   1.5   36  417-452   401-443 (502)
 73 PF13967 RSN1_TM:  Late exocyto  26.5 2.3E+02   0.005   22.5   5.9   31   15-46      4-34  (157)
 74 PF11227 DUF3025:  Protein of u  26.3      43 0.00093   28.1   1.6   20  407-426   192-211 (212)
 75 PLN02183 ferulate 5-hydroxylas  25.5      46   0.001   32.8   2.1   12  441-452   444-455 (516)
 76 PRK05933 type III secretion sy  25.0      82  0.0018   28.3   3.2   43  364-406   317-363 (372)
 77 PRK11486 flagellar biosynthesi  24.5 1.7E+02  0.0036   22.3   4.3   25   95-119    68-92  (124)
 78 KOG0114 Predicted RNA-binding   23.8 2.1E+02  0.0046   20.9   4.4   59   53-120    12-76  (124)
 79 PF08285 DPM3:  Dolichol-phosph  23.0 1.3E+02  0.0028   21.5   3.3   30  315-344    53-82  (91)
 80 PF15300 INT_SG_DDX_CT_C:  INTS  22.4      42 0.00092   22.1   0.8   15  361-375    40-54  (65)
 81 PRK13713 conjugal transfer pro  22.4 3.4E+02  0.0074   20.3   8.0   79  252-330     4-92  (118)
 82 PF07406 NICE-3:  NICE-3 protei  21.8      93   0.002   25.7   2.8   34   10-43      4-38  (186)
 83 PLN02426 cytochrome P450, fami  21.7      60  0.0013   31.9   2.0   36  417-452   404-446 (502)
 84 PLN03195 fatty acid omega-hydr  21.1      68  0.0015   31.6   2.3    9  332-340   374-382 (516)
 85 PF14824 Sirohm_synth_M:  Siroh  20.6 1.5E+02  0.0034   16.0   2.5   15  328-342    15-29  (30)
 86 PLN02687 flavonoid 3'-monooxyg  20.4      73  0.0016   31.4   2.4   12  441-452   441-452 (517)
 87 PF08492 SRP72:  SRP72 RNA-bind  20.2      68  0.0015   20.6   1.3    7  423-429    44-50  (59)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-68  Score=499.48  Aligned_cols=384  Identities=24%  Similarity=0.373  Sum_probs=320.2

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCc-
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWP-  129 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~-  129 (454)
                      .+.||||+++|++||++++.    ...++..+.++.++|||  ++++++|..++|||+|++.++|++.+ +..|++++. 
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~----~~~~h~~~~~ls~~yGp--i~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLG----SLPPHRSFRKLSKKYGP--VFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             CCCCcCCCCCCccccHHHcC----CCchhHHHHHHHHHhCC--eEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            48999999999999999995    23489999999999999  99999999999999999999999999 888888876 


Q ss_pred             hhH-Hhhh-cCcccccc-CcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcC--C-CceeHHHHHHHHHHHH
Q 012872          130 AST-MELI-GKKSFIGI-SYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSN--L-ERIEFLTQLRRLTFRI  203 (454)
Q Consensus       130 ~~~-~~~~-g~~~~~~~-~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~-~~vdl~~~~~~~~~~~  203 (454)
                      ... ..+. |..++..+ +|+.|+.+||.....+++...++.....-.++++.+++.+.+  . ++||+...+...+.++
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence            223 3333 56778777 799999999999988999999999888889999999998873  2 7899999999999999


Q ss_pred             HHHHHcCCCChHH----HHHHHHHHHHHhhhhhh------hh---hccCCc-ch-HHHHHHHHHHHHHHHHHHHHHHhcC
Q 012872          204 IMYIFLSSESDHV----LEALEREYTKLNCGVRA------MA---INLPGF-AY-HKALKARKNLVATLQSVVDDRRNRS  268 (454)
Q Consensus       204 ~~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~------~~---~~~p~~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~  268 (454)
                      +++++||.++...    ..++.............      ++   .++++. .. ++.....+++..++++.|+++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999997642    22344444443332221      22   223311 12 3344445568999999999998865


Q ss_pred             cCCCCCCcCcHHHHhhcchhhcCCC-CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCC
Q 012872          269 KDDNFPKKKDMMDALLSVEDENGRK-LEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRP  347 (454)
Q Consensus       269 ~~~~~~~~~~~l~~ll~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  347 (454)
                       +. + ...|+++.+++..++++.+ ++++++...+..+++||+|||++|+.|++.+|++||++|+|+++||+++++.. 
T Consensus       259 -~~-~-~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~-  334 (489)
T KOG0156|consen  259 -GD-E-EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG-  334 (489)
T ss_pred             -cc-C-CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-
Confidence             21 2 2279999999987654333 99999999999999999999999999999999999999999999999999653 


Q ss_pred             CCCCCCCHHHhhcCccHHHHHHhhhcCcCCCc-ccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCC
Q 012872          348 PTQKGLTLKEIREMDYLSKVVDETLRIITFSL-TVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSR  426 (454)
Q Consensus       348 ~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R  426 (454)
                        +. ++.+|+.+||||+|+|+|++|++|++| .++|.+++|+.|+||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       335 --r~-v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PER  411 (489)
T KOG0156|consen  335 --RL-VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPER  411 (489)
T ss_pred             --CC-CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhh
Confidence              33 899999999999999999999999999 57899999999999999999999999999999999999999999999


Q ss_pred             CCCCC--Ceeeeccccccccccce
Q 012872          427 WDVSC--RFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       427 fl~~~--~~~~~~~~~f~~g~~~c  448 (454)
                      |++.+  +.......+||.|.|.|
T Consensus       412 Fl~~~d~~~~~~~~iPFG~GRR~C  435 (489)
T KOG0156|consen  412 FLDSNDGKGLDFKLIPFGSGRRIC  435 (489)
T ss_pred             hcCCccccCCceEecCCCCCcCCC
Confidence            99953  44455667788888888


No 2  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=3.7e-66  Score=500.14  Aligned_cols=416  Identities=74%  Similarity=1.228  Sum_probs=336.7

Q ss_pred             HHHHHhhhhHHHHHhhCCCcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeCh
Q 012872           32 KWVMKRVNWWLYERKLGEKQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTP  111 (454)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~  111 (454)
                      ++++.....|.+....++++.+.||||+++|++|++.++....+.++++.++.+++++||+.++|++++++.+.++++||
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~p  100 (490)
T PLN02302         21 KWVLRRVNSWLYEPKLGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTP  100 (490)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCH
Confidence            33334444555544556666789999999999999998875444567889999999999973368999999999999999


Q ss_pred             HHHhhhhcCCCccCCCCchhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcCCCcee
Q 012872          112 ETCKRVLTDDDAFKPGWPASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSNLERIE  191 (454)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~vd  191 (454)
                      +.+++++.++..|.++++......+|..++...+|+.|+++|+.+.+.+.+++.++.+.+.++++++++++.+.+++.+|
T Consensus       101 e~~~~vl~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~  180 (490)
T PLN02302        101 EACKRVLTDDDAFEPGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIE  180 (490)
T ss_pred             HHHHHHHcCCCccccCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence            99999999876677665544444567566677899999999999999343678899999999999999999998777899


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Q 012872          192 FLTQLRRLTFRIIMYIFLSSESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDD  271 (454)
Q Consensus       192 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  271 (454)
                      +.+.+..+++++++.++||.+.+.....+...+..+...+..+...+|...+.+..++++.+.+++.+.|+++++..+.+
T Consensus       181 ~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  260 (490)
T PLN02302        181 FLTELRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQN  260 (490)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999999876554444444444433333333445655556667778899999999999987664433


Q ss_pred             CCCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCC
Q 012872          272 NFPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQK  351 (454)
Q Consensus       272 ~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  351 (454)
                      ......|+++.+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.+..+++..
T Consensus       261 ~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~  340 (490)
T PLN02302        261 ISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQK  340 (490)
T ss_pred             CCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCC
Confidence            22345699999998765555569999999999999999999999999999999999999999999999999865333222


Q ss_pred             CCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC
Q 012872          352 GLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSC  431 (454)
Q Consensus       352 ~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~  431 (454)
                      .++++++++||||+|||+|+||++|+++...|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++..
T Consensus       341 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~  420 (490)
T PLN02302        341 GLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT  420 (490)
T ss_pred             CCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC
Confidence            37999999999999999999999999998889999999999999999999999999999999999999999999999643


Q ss_pred             Ceeeeccccccccccce
Q 012872          432 RFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       432 ~~~~~~~~~f~~g~~~c  448 (454)
                      . ......+||.|.|.|
T Consensus       421 ~-~~~~~~pFG~G~r~C  436 (490)
T PLN02302        421 P-KAGTFLPFGLGSRLC  436 (490)
T ss_pred             C-CCCCccCCCCCCcCC
Confidence            2 112334555555555


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.3e-65  Score=494.22  Aligned_cols=371  Identities=29%  Similarity=0.591  Sum_probs=303.3

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++||+..+......+.+..++.+++++||+  +|++++|+.+.++++||+.+++++.+ ...|.++++.
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGK--IYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcc--cccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            57899999999999987664321124567889999999999  99999999999999999999999987 5556544444


Q ss_pred             hHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHH-hHHHHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHHHHc
Q 012872          131 STMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSV-YVHYIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMYIFL  209 (454)
Q Consensus       131 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~~~f  209 (454)
                      .....+|..+++..+|+.|+++|+++.+ .|++.+++. +.+.+.+.+..+++.|.+++.+|+.+.+.++++++++.++|
T Consensus       115 ~~~~~~g~~~~~~~~g~~wr~~Rk~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f  193 (490)
T PLN02500        115 SIGGILGKWSMLVLVGDMHRDMRSISLN-FLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIM  193 (490)
T ss_pred             HHHHHhCcccccccCCHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHh
Confidence            4444556457888899999999999998 888888887 57888888888889888777899999999999999999999


Q ss_pred             CCCChH-HHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCC-CCcCcHHHHhhcch
Q 012872          210 SSESDH-VLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNF-PKKKDMMDALLSVE  287 (454)
Q Consensus       210 G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l~~ll~~~  287 (454)
                      |.+.+. ....+...+..+.......+.++|...+++..++.+.+.+++.+.++++++..+++.. ....|+++.+++..
T Consensus       194 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  273 (490)
T PLN02500        194 SMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHS  273 (490)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhcc
Confidence            987543 2233333333333332222334565555677778889999999999988765433221 12468999998742


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCC-CCCCCCCHHHhhcCccHHH
Q 012872          288 DENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRP-PTQKGLTLKEIREMDYLSK  366 (454)
Q Consensus       288 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~~~~~l~~l~~l~a  366 (454)
                           .++++++++++.++++||+|||+++++|++++|++||++|+|+|+|++++.+... .+...++++++.+|||++|
T Consensus       274 -----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~a  348 (490)
T PLN02500        274 -----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQC  348 (490)
T ss_pred             -----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHH
Confidence                 4899999999999999999999999999999999999999999999999875321 1112289999999999999


Q ss_pred             HHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 012872          367 VVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVS  430 (454)
Q Consensus       367 ~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~  430 (454)
                      ||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++||||++|+||||+++
T Consensus       349 vikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~  412 (490)
T PLN02500        349 VINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQN  412 (490)
T ss_pred             HHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCC
Confidence            9999999999999888999999999999999999999999999999999999999999999974


No 4  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.7e-65  Score=489.42  Aligned_cols=381  Identities=29%  Similarity=0.557  Sum_probs=315.1

Q ss_pred             cCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCchh
Q 012872           53 SLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPAS  131 (454)
Q Consensus        53 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~~  131 (454)
                      +.||||+++|++||+..+.     +++..++.+++++||+  +|++++++.+.++++||+.+++++.+ ...+.++....
T Consensus        31 ~~ppgp~~~P~~G~~~~~~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFL-----KQGPDFMKNQRLRYGS--FFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             CCCCCCCCCCchhhHHHHH-----HhhHHHHHHHHHHhcc--CccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            6788999999999998875     4567789999999999  99999999999999999999999987 55555454444


Q ss_pred             HHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHH-hHHHHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHHHHcC
Q 012872          132 TMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSV-YVHYIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMYIFLS  210 (454)
Q Consensus       132 ~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  210 (454)
                      ....+|..+++..+|+.|+++|+++.+ .|++..++. +.+.+.+.++++++.|..++++|+.+.+..++.++++.++||
T Consensus       104 ~~~~lg~~~~~~~~g~~w~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g  182 (463)
T PLN02774        104 MLDILGTCNIAAVHGSTHRYMRGSLLS-LISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAG  182 (463)
T ss_pred             HHHHhCccchhhcCCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcC
Confidence            445667667888899999999999988 888888876 789999999999999987678999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcchhhc
Q 012872          211 SESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVEDEN  290 (454)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  290 (454)
                      .........+...+..+......++.++|....++..++++.+.+++.+.|+++++..     ....|+++.++...+ +
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll~~~~-~  256 (463)
T PLN02774        183 TLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASG-----ETHTDMLGYLMRKEG-N  256 (463)
T ss_pred             CCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccHHHHHHhCcc-C
Confidence            8765444444444444443333344456655556777888999999999999887542     124699999997432 2


Q ss_pred             CCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCccHHHHHHh
Q 012872          291 GRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDYLSKVVDE  370 (454)
Q Consensus       291 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E  370 (454)
                      +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+..++... ++++++++||||+|||+|
T Consensus       257 ~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~-~~~~~l~~lpyl~a~ikE  335 (463)
T PLN02774        257 RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP-IDWNDYKSMRFTRAVIFE  335 (463)
T ss_pred             CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCC-CCHHHHhcCcHHHHHHHH
Confidence            3358999999999999999999999999999999999999999999999999864322223 899999999999999999


Q ss_pred             hhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          371 TLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       371 ~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      +||++|+++.+.|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++.......++||.|.|.|
T Consensus       336 ~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C  413 (463)
T PLN02774        336 TSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLC  413 (463)
T ss_pred             HHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcC
Confidence            999999999888999999999999999999999999999999999999999999999974421112334566666665


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=6.2e-65  Score=493.25  Aligned_cols=390  Identities=18%  Similarity=0.285  Sum_probs=301.4

Q ss_pred             CcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhC-CCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCC
Q 012872           50 KQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFG-RTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPG  127 (454)
Q Consensus        50 ~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG-~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~  127 (454)
                      .+.+.||||+++|++||+.++..   ....+.++.++.++|| +  +|++++|+.+.++++||+.+++++.+ ...|.++
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~---~~~~~~~l~~~~~~yg~~--i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~r  128 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLK---NRPVFRWLHSLMKELNTE--IACVRLGNTHVIPVTCPKIAREIFKQQDALFASR  128 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhcc---CCcHhHHHHHHHHHhCCc--eEEEEcCCcceEEECCHHHHHHHHHhcchhhcCC
Confidence            35688999999999999988752   1223678899999999 7  99999999999999999999999987 6667766


Q ss_pred             CchhHHhhhcCc---cccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHH
Q 012872          128 WPASTMELIGKK---SFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLT  200 (454)
Q Consensus       128 ~~~~~~~~~g~~---~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~  200 (454)
                      +.......+|..   +++..+|+.|+++|+++.+.++++..+..+.+.++++++.+++.+.    +++++|+.+.+.+++
T Consensus       129 p~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t  208 (543)
T PLN02971        129 PLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYC  208 (543)
T ss_pred             CcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHH
Confidence            543344444432   3677889999999999976578777777888888888888877653    356799999999999


Q ss_pred             HHHHHHHHcCCCChHH--------HHHHHHHHHHHhhhhh-----hhhhccCCc------ch-HHHHHHHHHHHHHHHHH
Q 012872          201 FRIIMYIFLSSESDHV--------LEALEREYTKLNCGVR-----AMAINLPGF------AY-HKALKARKNLVATLQSV  260 (454)
Q Consensus       201 ~~~~~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~p~~------~~-~~~~~~~~~~~~~~~~~  260 (454)
                      +++++.++||.+....        .......+..+.....     .+..++|..      .. +...+..+.+.+++.+.
T Consensus       209 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (543)
T PLN02971        209 GNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPI  288 (543)
T ss_pred             HHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            9999999999874210        0111112222211110     111223321      11 23344566788888889


Q ss_pred             HHHHHhcCcCCCCCCcCcHHHHhhcchhhcCC-CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHH
Q 012872          261 VDDRRNRSKDDNFPKKKDMMDALLSVEDENGR-KLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQ  339 (454)
Q Consensus       261 i~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  339 (454)
                      |+++++..+++......|+++.+++..++++. .++++++.+++.++++||+|||+++++|++++|+.||++|+|+|+||
T Consensus       289 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        289 IDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            98887643332222346999999986543333 49999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCCCC
Q 012872          340 EMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPN  418 (454)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~d  418 (454)
                      +++++..   .. ++++++.+|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+|
T Consensus       369 ~~v~g~~---~~-~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~d  444 (543)
T PLN02971        369 DRVVGKE---RF-VQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSD  444 (543)
T ss_pred             HHHhCCC---CC-CCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCC
Confidence            9998642   22 8999999999999999999999999986 78999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCe-----eeeccccccccccce
Q 012872          419 PKEFNPSRWDVSCRF-----VYLNNLNMLVNAYAC  448 (454)
Q Consensus       419 p~~F~P~Rfl~~~~~-----~~~~~~~f~~g~~~c  448 (454)
                      |++|+||||+++...     ......+||.|.|.|
T Consensus       445 P~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C  479 (543)
T PLN02971        445 PLSFKPERHLNECSEVTLTENDLRFISFSTGKRGC  479 (543)
T ss_pred             ccccCcccCCCCCccccccCCCCccCCCCCCCCCC
Confidence            999999999974321     111345566666666


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.5e-65  Score=466.01  Aligned_cols=380  Identities=22%  Similarity=0.321  Sum_probs=296.4

Q ss_pred             CCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCC--Cch
Q 012872           54 LPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPG--WPA  130 (454)
Q Consensus        54 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~--~~~  130 (454)
                      +.|+|+++|++||+..+.+   .+.+.....+...+||+  ++.+..+..|.++|.||+.+++|+.+ ..+|..+  ...
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~---~~~~~~~~~~~~~~~~~--~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLK---RERPGDLLLDIYTKYRP--VVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             CCCCCCCCCcEecHHHHHh---ccCcHHHHHHHHhcCCC--EEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            6778888999999999875   23334444445555589  99999999999999999999999988 7778773  222


Q ss_pred             hHHh-hhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcC-C---CceeHHHHHHHHHHHHHH
Q 012872          131 STME-LIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSN-L---ERIEFLTQLRRLTFRIIM  205 (454)
Q Consensus       131 ~~~~-~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~---~~vdl~~~~~~~~~~~~~  205 (454)
                      .... -.+..+++.++|+.|+++|..+.| .|+..+++.+.+.+++.++++++.+.+ .   ..+++.+.+.+++.|+|+
T Consensus       107 ~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP-~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  107 GDPEDPLSALNLFFLRGERWKRLRTKLSP-TFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             CCCCCcccccCchhccCchHHHHHHhhcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHh
Confidence            2222 234478889999999999999999 999999999999999999999999874 2   389999999999999999


Q ss_pred             HHHcCCCChHHHH---HHHHHHHHHhhh---hhh----hhhccCCcc-----hHHHHHHHHHHHHHHHHHHHHHHhcCcC
Q 012872          206 YIFLSSESDHVLE---ALEREYTKLNCG---VRA----MAINLPGFA-----YHKALKARKNLVATLQSVVDDRRNRSKD  270 (454)
Q Consensus       206 ~~~fG~~~~~~~~---~~~~~~~~~~~~---~~~----~~~~~p~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (454)
                      .++||.+.+...+   .+..........   ...    +...+|...     ........+.+.+.+...++.|...   
T Consensus       186 ~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~---  262 (499)
T KOG0158|consen  186 SCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKE---  262 (499)
T ss_pred             HhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhc---
Confidence            9999999665441   111111111111   000    011111110     1122334455566666666666222   


Q ss_pred             CCCCCcCcHHHHhhcchhh--c---CC-CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHh
Q 012872          271 DNFPKKKDMMDALLSVEDE--N---GR-KLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVK  344 (454)
Q Consensus       271 ~~~~~~~~~l~~ll~~~~~--~---~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  344 (454)
                        .....|+++.+++...+  .   .. .+|.+||+++++.+++||.||||+++++++|+|++||++|+|||+||+++..
T Consensus       263 --~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~  340 (499)
T KOG0158|consen  263 --NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLE  340 (499)
T ss_pred             --CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhc
Confidence              13557999999998753  1   11 5999999999999999999999999999999999999999999999999975


Q ss_pred             cCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceec-CEEeCCCCEEEEeccccccCCCCCCCCCCCC
Q 012872          345 KRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNIS-GYTIPKGWKVLVWFRSVHLDPEIYPNPKEFN  423 (454)
Q Consensus       345 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~  423 (454)
                      +...    +++|.+++|+||++||+||||+||+++.+.|.+++|++++ ++.||||+.|+++.+++||||++||||++|+
T Consensus       341 ~~~~----ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~  416 (499)
T KOG0158|consen  341 EKEG----LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFK  416 (499)
T ss_pred             ccCC----CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCC
Confidence            5333    9999999999999999999999999999889999999999 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCe--eeeccccccccccce
Q 012872          424 PSRWDVSCRF--VYLNNLNMLVNAYAC  448 (454)
Q Consensus       424 P~Rfl~~~~~--~~~~~~~f~~g~~~c  448 (454)
                      ||||.+.++.  .....++||.|+|.|
T Consensus       417 PERF~~~~~~~~~~~~ylPFG~GPR~C  443 (499)
T KOG0158|consen  417 PERFEEENNKSRHPGAYLPFGVGPRNC  443 (499)
T ss_pred             CccCCCCcccccCCccccCCCCCcccc
Confidence            9999975533  222445566666666


No 7  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.4e-64  Score=479.95  Aligned_cols=378  Identities=31%  Similarity=0.601  Sum_probs=315.4

Q ss_pred             cccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCc
Q 012872           51 QYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWP  129 (454)
Q Consensus        51 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~  129 (454)
                      ..+.||||+++|++||+.++.    .++++.++.+++++||+  ++++++++.+.++++||+.+++++.+ ...+.+...
T Consensus        33 ~~~~Ppgp~~~P~iG~~~~~~----~~~~~~~~~~~~~~yG~--i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~  106 (463)
T PLN02196         33 KLPLPPGTMGWPYVGETFQLY----SQDPNVFFASKQKRYGS--VFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFP  106 (463)
T ss_pred             CCCCCCCCCCCCccchHHHHH----hcCHHHHHHHHHHHhhh--hheeeecCCceEEEcCHHHHHHHHhCCCCcccccCc
Confidence            368899999999999988765    46888999999999999  99999999999999999999999987 455543332


Q ss_pred             hhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHHHHc
Q 012872          130 ASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMYIFL  209 (454)
Q Consensus       130 ~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~~~f  209 (454)
                      .......|..+++..+|+.|+++|+++.+ .|+++++..+.+.+.+.++++++.|. ++.+|+.+.++.+++++++.++|
T Consensus       107 ~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        107 ASKERMLGKQAIFFHQGDYHAKLRKLVLR-AFMPDAIRNMVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             hHHHHHcCcccccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHc
Confidence            22334557668888999999999999999 88889999999999999999999996 45799999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcchhh
Q 012872          210 SSESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVEDE  289 (454)
Q Consensus       210 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~~~  289 (454)
                      |.+.......+...+..+...+..++..+|....++..++++.+.+++.+.|+++++...     ...|+++.+++.   
T Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~-----~~~d~l~~ll~~---  256 (463)
T PLN02196        185 GKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGS-----SHNDLLGSFMGD---  256 (463)
T ss_pred             CCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCC-----CcccHHHHHHhc---
Confidence            998644334444444444443334455566554567788888999999999988875421     235899998853   


Q ss_pred             cCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCccHHHHHH
Q 012872          290 NGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDYLSKVVD  369 (454)
Q Consensus       290 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~  369 (454)
                       +.+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.+..+.+.. ++++++.++|||+|||+
T Consensus       257 -~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~-~~~~~~~~l~yl~avi~  334 (463)
T PLN02196        257 -KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGES-LTWEDTKKMPLTSRVIQ  334 (463)
T ss_pred             -CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCC-CCHHHHhcChHHHHHHH
Confidence             2358999999999999999999999999999999999999999999999998864333333 89999999999999999


Q ss_pred             hhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          370 ETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       370 E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      |+||++|+++.+.|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++...  ....++||.|.|.|
T Consensus       335 EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~~--~~~~lpFG~G~r~C  411 (463)
T PLN02196        335 ETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAPK--PNTFMPFGNGTHSC  411 (463)
T ss_pred             HHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCCC--CCcccCcCCCCCCC
Confidence            999999999988899999999999999999999999999999999999999999999996322  22445566666666


No 8  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=5.7e-64  Score=477.81  Aligned_cols=393  Identities=31%  Similarity=0.532  Sum_probs=319.5

Q ss_pred             CCcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCC
Q 012872           49 EKQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPG  127 (454)
Q Consensus        49 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~  127 (454)
                      .++.+.||||.++|++||++.+...-...+++.++.+++++||+  ||++++++.+.++++||+.+++++.+ ...+..+
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~--i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~   80 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGK--VFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPA   80 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhh--eeeeccCCCCEEEEeCHHHhhHHHhCCCCeeecc
Confidence            34467899999999999999875321124688999999999999  99999999999999999999999988 5556554


Q ss_pred             CchhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHH-hHHHHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHH
Q 012872          128 WPASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSV-YVHYIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMY  206 (454)
Q Consensus       128 ~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~  206 (454)
                      +......++|..+++..+|+.|+++|+++.+ .|+...+.. ..+.+.+.++++++.|.+++.+|+.+.+..+++++++.
T Consensus        81 ~~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~  159 (452)
T PLN03141         81 YPKSLTELMGKSSILLINGSLQRRVHGLIGA-FLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVK  159 (452)
T ss_pred             CchhHHHHhCcccccccCcHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHH
Confidence            4444455677667888899999999999998 676666665 46788888888888887677899999999999999999


Q ss_pred             HHcCCCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCC---CCcCcHHHHh
Q 012872          207 IFLSSESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNF---PKKKDMMDAL  283 (454)
Q Consensus       207 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~l~~l  283 (454)
                      ++||.+.+.....+...+..+......++..+|.+...+..++.+++.+++..+|+++++..+++..   ....|+++.+
T Consensus       160 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~l  239 (452)
T PLN03141        160 ALISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVL  239 (452)
T ss_pred             HHcCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHH
Confidence            9999876554555555555555554444555666555666778899999999999998876433211   1135899999


Q ss_pred             hcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCcc
Q 012872          284 LSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDY  363 (454)
Q Consensus       284 l~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~  363 (454)
                      ++..   +..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++++.+........++.+++.+|||
T Consensus       240 l~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpy  316 (452)
T PLN03141        240 LRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPF  316 (452)
T ss_pred             HhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHH
Confidence            8754   2358999999999999999999999999999999999999999999999998753222222389999999999


Q ss_pred             HHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCeeeeccccccc
Q 012872          364 LSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLV  443 (454)
Q Consensus       364 l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~  443 (454)
                      |+|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++.. ....++||.
T Consensus       317 l~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~-~~~~~pFG~  395 (452)
T PLN03141        317 TQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMN-NSSFTPFGG  395 (452)
T ss_pred             HHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCC-CCCCCCCCC
Confidence            9999999999999998889999999999999999999999999999999999999999999999975321 223455666


Q ss_pred             cccce
Q 012872          444 NAYAC  448 (454)
Q Consensus       444 g~~~c  448 (454)
                      |.|.|
T Consensus       396 G~R~C  400 (452)
T PLN03141        396 GQRLC  400 (452)
T ss_pred             CCCCC
Confidence            66655


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=8.5e-63  Score=478.04  Aligned_cols=386  Identities=18%  Similarity=0.252  Sum_probs=301.9

Q ss_pred             cCCCcCcCCccccchHHHHHHhh--------------cCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhh
Q 012872           53 SLPPGDMGWPFIGNMWSFLRAFK--------------TTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVL  118 (454)
Q Consensus        53 ~~ppgp~~~P~~G~~~~~~~~~~--------------~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~  118 (454)
                      ..||||+++|++||+.++.....              ..+....+.+|+++||+  +|++++|+.+.++++||+.+++++
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGK--RFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCC--eEEEccCCccEEEECCHHHHHHHH
Confidence            67999999999999988753100              02333467889999999  999999999999999999999999


Q ss_pred             cCCCccCCCCch-h--HHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CC-Cce
Q 012872          119 TDDDAFKPGWPA-S--TMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NL-ERI  190 (454)
Q Consensus       119 ~~~~~~~~~~~~-~--~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~-~~v  190 (454)
                      .+...+..+... .  .....| .+++..+|+.|+++|+++.+ .|+..+++.+.+.+.++++.+++.+.    .+ .++
T Consensus       120 ~~~~~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        120 TKYNTVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAP-AFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             hcCCCCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            985444443321 1  223345 67888999999999999998 89989999999999999999999985    23 479


Q ss_pred             eHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhhh----hhh--hh--hccCCcchHHHHHHHHHHHHHHHHHHH
Q 012872          191 EFLTQLRRLTFRIIMYIFLSSESDHVLEALEREYTKLNCG----VRA--MA--INLPGFAYHKALKARKNLVATLQSVVD  262 (454)
Q Consensus       191 dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~----~~~--~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~  262 (454)
                      |+.+.++++++++++.++||.+.+.. +.+...+..+...    ...  ++  .++|....++..+..+.+.+++.+.|+
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999985432 1122222111111    100  11  122322233445567788899999999


Q ss_pred             HHHhcCcCCC-CCCcCcHHHHhhcchhh---cCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHH
Q 012872          263 DRRNRSKDDN-FPKKKDMMDALLSVEDE---NGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAE  338 (454)
Q Consensus       263 ~~~~~~~~~~-~~~~~~~l~~ll~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E  338 (454)
                      ++++..+.+. .....|+++.+++..++   ++..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        277 SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            8876543321 12346899999975432   2234889999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCC-C
Q 012872          339 QEMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIY-P  417 (454)
Q Consensus       339 i~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~  417 (454)
                      +++++++.    . ++.+++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++| |
T Consensus       357 i~~v~~~~----~-~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~  431 (516)
T PLN02290        357 VAEVCGGE----T-PSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGK  431 (516)
T ss_pred             HHHHhCCC----C-CCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCC
Confidence            99998642    2 8999999999999999999999999998899999999999999999999999999999999999 8


Q ss_pred             CCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          418 NPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       418 dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      ||++|+||||++++........+||.|+|.|
T Consensus       432 dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C  462 (516)
T PLN02290        432 DANEFNPDRFAGRPFAPGRHFIPFAAGPRNC  462 (516)
T ss_pred             ChhhcCccccCCCCCCCCCeEecCCCCCCCC
Confidence            9999999999964221112335566666666


No 10 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.2e-63  Score=477.74  Aligned_cols=384  Identities=21%  Similarity=0.290  Sum_probs=302.1

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++|++..+     ....+.++.+++++||+  +|++++++.+.++++||+.+++++.+ ...|..++..
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~-----~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMM-----DQLTHRGLANLAKQYGG--LFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             CCCCcCCCCCCeeccHHhc-----CCcchHHHHHHHHHhCC--eeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            4789999999999998776     23456789999999999  99999999999999999999999987 5556554332


Q ss_pred             hH-Hhhhc--CccccccCcHHHHHHHhhh-cCCCCChhHHHHhHHHHHHHHHHHHHhhc--CCCceeHHHHHHHHHHHHH
Q 012872          131 ST-MELIG--KKSFIGISYEEHKRLRRLT-AAPVNGHEALSVYVHYIEDIVTSALDKWS--NLERIEFLTQLRRLTFRII  204 (454)
Q Consensus       131 ~~-~~~~g--~~~~~~~~~~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~~vdl~~~~~~~~~~~~  204 (454)
                      .. ....+  ..+++..+|+.|+++|+++ .+ +|+.+.++.+.+. .++++.+++.+.  .++++|+.+.+.+++.+++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~-~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMK-LFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHH-hcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHH
Confidence            22 12222  3567788899999999995 56 8998889888885 568899999884  3678999999999999999


Q ss_pred             HHHHcCCCChHHHHHHHHHHHHHhhhhh------hhhh--cc-CCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCC---
Q 012872          205 MYIFLSSESDHVLEALEREYTKLNCGVR------AMAI--NL-PGFAYHKALKARKNLVATLQSVVDDRRNRSKDDN---  272 (454)
Q Consensus       205 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---  272 (454)
                      +.++||...+.....+.+.+..+...+.      .+++  ++ +....++..+.++.+.+++.++|+++++..+.++   
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        186 YRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             HhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            9999999765433444444443332211      1111  11 1112346666777888888888888765433221   


Q ss_pred             --CCCcCcHHHHhhcchhhc-----------CCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHH
Q 012872          273 --FPKKKDMMDALLSVEDEN-----------GRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQ  339 (454)
Q Consensus       273 --~~~~~~~l~~ll~~~~~~-----------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  339 (454)
                        .....|+++.+++...++           +..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|+
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence              112358999999754321           2358999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCC
Q 012872          340 EMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNP  419 (454)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp  419 (454)
                      +++++..   .. ++.+++.+||||+|||+|+||++|+++...|.+.+|++++||.|||||.|.++.+++||||++||||
T Consensus       346 ~~v~~~~---~~-~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP  421 (516)
T PLN02183        346 ADVVGLN---RR-VEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDP  421 (516)
T ss_pred             HHHcCCC---CC-CCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCc
Confidence            9998632   22 8999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCee----eeccccccccccce
Q 012872          420 KEFNPSRWDVSCRFV----YLNNLNMLVNAYAC  448 (454)
Q Consensus       420 ~~F~P~Rfl~~~~~~----~~~~~~f~~g~~~c  448 (454)
                      ++|+||||++++...    .....+||.|+|.|
T Consensus       422 ~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~C  454 (516)
T PLN02183        422 DTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSC  454 (516)
T ss_pred             cccCchhhCCCCCccccCCcceecCCCCCCCCC
Confidence            999999999743321    11345667766666


No 11 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.9e-62  Score=471.60  Aligned_cols=385  Identities=21%  Similarity=0.347  Sum_probs=305.8

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||.++|++||+.++.     .+++.++.+++++||+  +|++++|+.+.++++||+.+++++.+ ...|.+++..
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~  105 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLG-----PKPHHTMAALAKTYGP--LFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPN  105 (517)
T ss_pred             CCCCccCCCCCccccHHhcC-----CchhHHHHHHHHHhCC--eeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCc
Confidence            46789999999999988773     5688999999999999  99999999999999999999999987 5666665443


Q ss_pred             hHHhhh---cCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc---CCCceeHHHHHHHHHHHHH
Q 012872          131 STMELI---GKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS---NLERIEFLTQLRRLTFRII  204 (454)
Q Consensus       131 ~~~~~~---g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~~vdl~~~~~~~~~~~~  204 (454)
                      .....+   +..+++..+|+.|+++|+.+..+.|+.+.++.+.+.++++++++++.+.   +++++|+.+.+..++++++
T Consensus       106 ~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        106 SGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNAL  185 (517)
T ss_pred             cchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence            322222   3345666789999999999983389989999999999999999999885   3567999999999999999


Q ss_pred             HHHHcCCCChH-----HHHHHHHHHHHHhhhhh------hhh--hccCCc-chHHHHHHHHHHHHHHHHHHHHHHhcCcC
Q 012872          205 MYIFLSSESDH-----VLEALEREYTKLNCGVR------AMA--INLPGF-AYHKALKARKNLVATLQSVVDDRRNRSKD  270 (454)
Q Consensus       205 ~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~------~~~--~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (454)
                      +.++||.++..     ....+.+.+..+.....      .++  .+++.. ..++..+..+.+.+++.++|+++++..+.
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  265 (517)
T PLN02687        186 GRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT  265 (517)
T ss_pred             HHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999987421     12333333333322111      111  112111 12455566778889999999988876433


Q ss_pred             CCCCCcCcHHHHhhcchhh-----cCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhc
Q 012872          271 DNFPKKKDMMDALLSVEDE-----NGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKK  345 (454)
Q Consensus       271 ~~~~~~~~~l~~ll~~~~~-----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  345 (454)
                      + .....|+++.+++..++     ++..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       266 ~-~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        266 G-SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             c-CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence            2 12346999999986543     23469999999999999999999999999999999999999999999999999854


Q ss_pred             CCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCC
Q 012872          346 RPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNP  424 (454)
Q Consensus       346 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P  424 (454)
                      .   .. ++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++|+.||+||.|.++.+++||||++|+||++|+|
T Consensus       345 ~---~~-~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~P  420 (517)
T PLN02687        345 D---RL-VSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRP  420 (517)
T ss_pred             C---CC-CCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCc
Confidence            2   22 8999999999999999999999999985 78999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCe-------eeeccccccccccce
Q 012872          425 SRWDVSCRF-------VYLNNLNMLVNAYAC  448 (454)
Q Consensus       425 ~Rfl~~~~~-------~~~~~~~f~~g~~~c  448 (454)
                      |||++++..       ......+||.|.|.|
T Consensus       421 eRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C  451 (517)
T PLN02687        421 DRFLPGGEHAGVDVKGSDFELIPFGAGRRIC  451 (517)
T ss_pred             hhcCCCCCccccccCCCceeeCCCCCCCCCC
Confidence            999974321       111234566666655


No 12 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5.2e-62  Score=470.98  Aligned_cols=367  Identities=20%  Similarity=0.307  Sum_probs=293.1

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++||+.++.    ..++..++.+++++||+  +|++++|+.+.++++||+.+++++.+ ...|..++..
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~----~~~~~~~~~~~~~~yG~--~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~  100 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQME----KFNPQHFLFRLSKLYGP--IFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLL  100 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcC----CCCccHHHHHHHHHcCC--eEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            57799999999999998874    34678899999999999  99999999999999999999999987 4456654432


Q ss_pred             hHH---hhhcCccccccCcHHHHHHHhhh-cCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHH
Q 012872          131 STM---ELIGKKSFIGISYEEHKRLRRLT-AAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFR  202 (454)
Q Consensus       131 ~~~---~~~g~~~~~~~~~~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~  202 (454)
                      ...   ...+....+...++.|+++|+.+ .+ +|+++++..+.+.++++++++++.|.    +++++|+.+.+..++++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~-~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~d  179 (499)
T PLN03234        101 KGQQTMSYQGRELGFGQYTAYYREMRKMCMVN-LFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNC  179 (499)
T ss_pred             hhhhhhccCCCccccCCCcHHHHHHHHHHHHH-hcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHH
Confidence            211   11232222445678999999986 46 89999999999999999999999984    46789999999999999


Q ss_pred             HHHHHHcCCCChHHHH---HHHHHHHHHhhhhh--hhhhccCC--------cchHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          203 IIMYIFLSSESDHVLE---ALEREYTKLNCGVR--AMAINLPG--------FAYHKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       203 ~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      +++.++||.+.+....   .+.+.+........  .+...+|.        ...++..++.+.+.+++.+.|+++++...
T Consensus       180 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (499)
T PLN03234        180 VVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR  259 (499)
T ss_pred             HHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999998654322   22222222111110  01111111        11246677888999999999998765432


Q ss_pred             CCCCCCcCcHHHHhhcchhhc--CCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCC
Q 012872          270 DDNFPKKKDMMDALLSVEDEN--GRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRP  347 (454)
Q Consensus       270 ~~~~~~~~~~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  347 (454)
                      .+  ....|+++.+++..+++  +..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|++++.++. 
T Consensus       260 ~~--~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-  336 (499)
T PLN03234        260 PK--QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-  336 (499)
T ss_pred             cC--CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-
Confidence            22  13458999998765432  23589999999999999999999999999999999999999999999999998542 


Q ss_pred             CCCCCCCHHHhhcCccHHHHHHhhhcCcCCCccc-ccccCccceecCEEeCCCCEEEEeccccccCCCCC-CCCCCCCCC
Q 012872          348 PTQKGLTLKEIREMDYLSKVVDETLRIITFSLTV-FREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIY-PNPKEFNPS  425 (454)
Q Consensus       348 ~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~  425 (454)
                        .. ++++++.+|||++|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++.+++||||++| |||++|+||
T Consensus       337 --~~-~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        337 --GY-VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             --CC-CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence              22 89999999999999999999999999974 79999999999999999999999999999999999 899999999


Q ss_pred             CCCCCC
Q 012872          426 RWDVSC  431 (454)
Q Consensus       426 Rfl~~~  431 (454)
                      ||++++
T Consensus       414 R~l~~~  419 (499)
T PLN03234        414 RFMKEH  419 (499)
T ss_pred             hhcCCC
Confidence            999743


No 13 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.9e-61  Score=457.19  Aligned_cols=388  Identities=32%  Similarity=0.581  Sum_probs=305.1

Q ss_pred             CcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCC
Q 012872           50 KQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGW  128 (454)
Q Consensus        50 ~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~  128 (454)
                      .+.+.||||.++|++||++++.......++..++.+++++||+  +|++++++.+.++++||+.+++++.+ ...|..++
T Consensus        27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~--v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGS--LFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhch--hhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            3356789999999999998875321135688899999999999  99999999999999999999999988 56665555


Q ss_pred             chhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHH-HHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHHH
Q 012872          129 PASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVH-YIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMYI  207 (454)
Q Consensus       129 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~~  207 (454)
                      ......++|+.+++..+|+.|+++|+++.+ +++...+..+.. .+.+.++..++.|.  +++|+.+.+.++++++++++
T Consensus       105 ~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~t~~vi~~~  181 (472)
T PLN02987        105 PGSISNLLGKHSLLLMKGNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSWS--SRVLLMEEAKKITFELTVKQ  181 (472)
T ss_pred             cHHHHHHhCcccccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhhc--cceehHHHHHHHHHHHHHHH
Confidence            445556677678888999999999999876 666555555432 23445555566663  47999999999999999999


Q ss_pred             HcCCCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcch
Q 012872          208 FLSSESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVE  287 (454)
Q Consensus       208 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~  287 (454)
                      +||.+.+...+.+.+.+......+...+..+....+++..++++++.+++.++|+++++....+. ....|+++.+++..
T Consensus       182 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~  260 (472)
T PLN02987        182 LMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGA-EKKKDMLAALLASD  260 (472)
T ss_pred             HcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-cccccHHHHHHhcC
Confidence            99987654444444444444333322111111224567788899999999999999877543321 23469999999764


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCccHHHH
Q 012872          288 DENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDYLSKV  367 (454)
Q Consensus       288 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~  367 (454)
                      +    +++++++++++..+++||+|||+.+++|++++|++||++|+++++|++++.+..+.+.. ++.+++.+|||++||
T Consensus       261 ~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~-~~~~~l~~lpyl~a~  335 (472)
T PLN02987        261 D----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYS-LEWSDYKSMPFTQCV  335 (472)
T ss_pred             C----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCC-CCHHHHhcChHHHHH
Confidence            2    58999999999999999999999999999999999999999999999998764333333 899999999999999


Q ss_pred             HHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCCCeee--eccccccccc
Q 012872          368 VDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSCRFVY--LNNLNMLVNA  445 (454)
Q Consensus       368 i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~--~~~~~f~~g~  445 (454)
                      ++|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++....  ....+||.|.
T Consensus       336 i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~  415 (472)
T PLN02987        336 VNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGP  415 (472)
T ss_pred             HHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCC
Confidence            99999999999888899999999999999999999999999999999999999999999997432211  1234455555


Q ss_pred             cce
Q 012872          446 YAC  448 (454)
Q Consensus       446 ~~c  448 (454)
                      |.|
T Consensus       416 r~C  418 (472)
T PLN02987        416 RLC  418 (472)
T ss_pred             cCC
Confidence            555


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.3e-61  Score=466.06  Aligned_cols=373  Identities=20%  Similarity=0.306  Sum_probs=293.4

Q ss_pred             CcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCC
Q 012872           50 KQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGW  128 (454)
Q Consensus        50 ~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~  128 (454)
                      ...+.||||+++|++||+..+...  ..+++.++.+++++||+  +|++++|+.+.++++||+.+++++.+ ...|..++
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~--~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp  107 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNS--SADVEPLLRRLIARYGP--VVSLRVGSRLSVFVADRRLAHAALVERGAALADRP  107 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccc--cccHHHHHHHHHHHhCC--eEEEEcCCccEEEECCHHHHHHHHHhcCCccccCC
Confidence            345789999999999998765311  24577889999999999  99999999999999999999999987 66666554


Q ss_pred             chhHHhhhcCc-cccc--cCcHHHHHHHh-hhcCCCCChhHHHHhHHHHHHHHHHHHHhhcC----CCceeHHHHHHHHH
Q 012872          129 PASTMELIGKK-SFIG--ISYEEHKRLRR-LTAAPVNGHEALSVYVHYIEDIVTSALDKWSN----LERIEFLTQLRRLT  200 (454)
Q Consensus       129 ~~~~~~~~g~~-~~~~--~~~~~~~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~vdl~~~~~~~~  200 (454)
                      ......++|.. +++.  .+|+.|+++|| ++.+ .|+.++++.+.+.+.++++.+++.|.+    ++.+|+.+.+..++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~-~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~  186 (519)
T PLN00168        108 AVASSRLLGESDNTITRSSYGPVWRLLRRNLVAE-TLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAM  186 (519)
T ss_pred             cccchhhhccCCCceeCCCCCHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence            43333444432 3443  67999999987 5666 999999999999999999999998852    34689999999999


Q ss_pred             HHHHHHHHcCCCChHHH-HHHHHHHHHHhh---hhhhhhhccCCc-------chHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          201 FRIIMYIFLSSESDHVL-EALEREYTKLNC---GVRAMAINLPGF-------AYHKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       201 ~~~~~~~~fG~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      .++++.++||.+++... ..+......+..   ....+...+|..       ...+..+..+++.+++.++|+++++..+
T Consensus       187 ~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        187 FCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999865322 222222222111   111111122221       1234456778889999999988876431


Q ss_pred             C----CCC-----CCcCcHHHHhhcchh--hcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHH
Q 012872          270 D----DNF-----PKKKDMMDALLSVED--ENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAE  338 (454)
Q Consensus       270 ~----~~~-----~~~~~~l~~ll~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E  338 (454)
                      .    +..     ....|+++.+++...  +++..++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            1    100     113589999997643  22346999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCCC
Q 012872          339 QEMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYP  417 (454)
Q Consensus       339 i~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~  417 (454)
                      +++++++..  .. ++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++||
T Consensus       347 i~~v~~~~~--~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        347 IKAKTGDDQ--EE-VSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHhCCCC--CC-CCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            999985321  22 8999999999999999999999999986 5799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC
Q 012872          418 NPKEFNPSRWDVS  430 (454)
Q Consensus       418 dp~~F~P~Rfl~~  430 (454)
                      ||++|+||||+++
T Consensus       424 ~p~~F~PeRf~~~  436 (519)
T PLN00168        424 RPMEFVPERFLAG  436 (519)
T ss_pred             CccccCcccCCCC
Confidence            9999999999963


No 15 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=8.8e-62  Score=468.54  Aligned_cols=386  Identities=21%  Similarity=0.347  Sum_probs=294.7

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++||+.++.    ..++..++.+++++||+  +|++++++.+.++++||+.+++++.+ ...|.+++..
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~----~~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~  101 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQ----KLNPQRFFAGWAKKYGP--ILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH  101 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcC----CCChhHHHHHHHHHhCC--eEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence            57899999999999998874    35688999999999999  99999999999999999999999987 4455544332


Q ss_pred             hHHhh--hcCccc-cccCcHHHHHHHhh-hcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHH
Q 012872          131 STMEL--IGKKSF-IGISYEEHKRLRRL-TAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFR  202 (454)
Q Consensus       131 ~~~~~--~g~~~~-~~~~~~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~  202 (454)
                      .....  .|...+ +..+|+.|+++|+. +.+ +|++..+..+.+.+.++++++++.|.    +++.+|+.+.+.+++++
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~d  180 (502)
T PLN02966        102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNH-LFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNS  180 (502)
T ss_pred             ccceeeccCcceeeeCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHH
Confidence            22222  232222 44568999999999 666 89999999999999999999999984    35579999999999999


Q ss_pred             HHHHHHcCCCChHHHHHHHHHHHHHhh---hhhh--hhhccCC------c-ch-HHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          203 IIMYIFLSSESDHVLEALEREYTKLNC---GVRA--MAINLPG------F-AY-HKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       203 ~~~~~~fG~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~p~------~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      +++.++||.+.+...+........+..   ....  +..++|.      + .+ .......+...+++.+.+++......
T Consensus       181 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (502)
T PLN02966        181 VVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR  260 (502)
T ss_pred             HHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999864332222222222111   1110  0111121      0 11 12233455667777777776543311


Q ss_pred             CCCCCCcCcHHHHhhcchhhc--CCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCC
Q 012872          270 DDNFPKKKDMMDALLSVEDEN--GRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRP  347 (454)
Q Consensus       270 ~~~~~~~~~~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  347 (454)
                      .+  ....++++.+++..+++  +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+..+
T Consensus       261 ~~--~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  338 (502)
T PLN02966        261 VK--PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG  338 (502)
T ss_pred             cc--cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC
Confidence            11  12358999999765443  335899999999999999999999999999999999999999999999999986432


Q ss_pred             CCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCC-CCCCCCCCC
Q 012872          348 PTQKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIY-PNPKEFNPS  425 (454)
Q Consensus       348 ~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~  425 (454)
                       +.. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| |||++|+||
T Consensus       339 -~~~-~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        339 -STF-VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             -CCc-CCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence             122 7999999999999999999999999996 679999999999999999999999999999999999 999999999


Q ss_pred             CCCCCCCe---eeeccccccccccce
Q 012872          426 RWDVSCRF---VYLNNLNMLVNAYAC  448 (454)
Q Consensus       426 Rfl~~~~~---~~~~~~~f~~g~~~c  448 (454)
                      ||++++..   ......+||.|.|.|
T Consensus       417 Rwl~~~~~~~~~~~~~~pFg~G~R~C  442 (502)
T PLN02966        417 RFLEKEVDFKGTDYEFIPFGSGRRMC  442 (502)
T ss_pred             hhcCCCCCcCCCcCCccCCCCCCCCC
Confidence            99974321   112334455555555


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.4e-62  Score=465.01  Aligned_cols=389  Identities=29%  Similarity=0.481  Sum_probs=303.8

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-C--CccCCCC
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-D--DAFKPGW  128 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~--~~~~~~~  128 (454)
                      .+.||||+++|++|++.++....  .+...++.++..+||+  +|+.++||.+.++++||+.+++|+.. .  ..+...+
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~  109 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGP--IFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDY  109 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCc--hhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhH
Confidence            47899999999999999997432  4677889999999999  99999999999999999999999964 2  2333444


Q ss_pred             chhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc--CCC-ceeHHHHHHHHHHHHHH
Q 012872          129 PASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS--NLE-RIEFLTQLRRLTFRIIM  205 (454)
Q Consensus       129 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~-~vdl~~~~~~~~~~~~~  205 (454)
                      .....+++|. |++..+|+.|+++||++.+ .|+...++.+...+.+++..++..+.  ..+ .+|+.+.+.++++|++|
T Consensus       110 ~~~~~~~lG~-gll~~~g~~W~~~Rk~~~~-~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  110 PESLKPWLGD-GLLFSDGEKWHKHRKLLTP-AFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHHHHhcC-ccccCCchHHHHHHhhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHH
Confidence            4467788895 8888889999999999999 99989999999999988888777654  233 39999999999999999


Q ss_pred             HHHcCCCC-hHHHHHHHHHHHHHhh--hhhhhhhccC-Cc-------chHHHHHHHHHHHHHHHHHHHHHHhcCcCCCC-
Q 012872          206 YIFLSSES-DHVLEALEREYTKLNC--GVRAMAINLP-GF-------AYHKALKARKNLVATLQSVVDDRRNRSKDDNF-  273 (454)
Q Consensus       206 ~~~fG~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~p-~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  273 (454)
                      .++||... +...+.....+..+..  .....+...| ..       ..++..++.+.+++++.++|+++++...++.. 
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99999332 2222222223333331  1111222223 11       34566778999999999999999986544322 


Q ss_pred             --CCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCC
Q 012872          274 --PKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQK  351 (454)
Q Consensus       274 --~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  351 (454)
                        ....|+++.+....+   ..++++++.+++.++++||+|||+++++|+++.|+.||++|+++++|+++++++.+..  
T Consensus       268 ~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~--  342 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK--  342 (497)
T ss_pred             ccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC--
Confidence              234578876333222   4799999999999999999999999999999999999999999999999999754432  


Q ss_pred             CCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCcccee-cCEEeCCCCEEEEeccccccCCCCCC-CCCCCCCCCCCC
Q 012872          352 GLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNI-SGYTIPKGWKVLVWFRSVHLDPEIYP-NPKEFNPSRWDV  429 (454)
Q Consensus       352 ~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-dp~~F~P~Rfl~  429 (454)
                       .+....++|+||++||+|||||+||+|.+.|.+.+|+++ +||.||||+.|+++.+++|||+++|+ ||++||||||++
T Consensus       343 -~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  343 -WEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             -CChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence             233333379999999999999999999999999999999 58999999999999999999999995 999999999997


Q ss_pred             CCCeeeeccccccccccceeeee
Q 012872          430 SCRFVYLNNLNMLVNAYACHISI  452 (454)
Q Consensus       430 ~~~~~~~~~~~f~~g~~~ch~~~  452 (454)
                      ++.....+...|..|+.|.|.||
T Consensus       422 ~~~~~~~~~~~fipFsaGpR~Ci  444 (497)
T KOG0157|consen  422 GEEKAKRHPFAFIPFSAGPRNCI  444 (497)
T ss_pred             CCCcCCCCCccccCCCCCcccch
Confidence            54433222334444444444443


No 17 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5.7e-61  Score=461.36  Aligned_cols=384  Identities=20%  Similarity=0.320  Sum_probs=302.2

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++|++..+     ..+++.++.+++++||+  +|++++|+.+.++++||+.+++++.+ ...|..+...
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~-----~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~  102 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLL-----GNMPHVALAKMAKRYGP--VMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPN  102 (504)
T ss_pred             CCCcccCCCCCeeechhhc-----CCchHHHHHHHHHHhCC--eEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCc
Confidence            4679999999999998766     34578899999999999  99999999999999999999999987 5566655432


Q ss_pred             hH-H-hhhc-CccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHHH
Q 012872          131 ST-M-ELIG-KKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFRI  203 (454)
Q Consensus       131 ~~-~-~~~g-~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~~  203 (454)
                      .. . ...| ..+++..+|+.|+++|+.+.+.+|+++.++.+.+.+.+++..+++.+.    +++++|+.+.+..++.++
T Consensus       103 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~v  182 (504)
T PLN00110        103 AGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANM  182 (504)
T ss_pred             cchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHH
Confidence            21 1 2233 356777889999999999986589999999999999999888887763    466899999999999999


Q ss_pred             HHHHHcCCCC----hHHHHHHHHHHHHHhhhhh--hhhhccCC------cc-hHHHHHHHHHHHHHHHHHHHHHHhcCcC
Q 012872          204 IMYIFLSSES----DHVLEALEREYTKLNCGVR--AMAINLPG------FA-YHKALKARKNLVATLQSVVDDRRNRSKD  270 (454)
Q Consensus       204 ~~~~~fG~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~p~------~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (454)
                      ++.++||.+.    +.....+...+........  .+...+|.      .. .++..+..+.+.+++.+.++++++..+.
T Consensus       183 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  262 (504)
T PLN00110        183 IGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE  262 (504)
T ss_pred             HHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999874    1112333333333322111  11112221      11 1334455777888888888887764332


Q ss_pred             CCCCCcCcHHHHhhcchhh-cCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCC
Q 012872          271 DNFPKKKDMMDALLSVEDE-NGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPT  349 (454)
Q Consensus       271 ~~~~~~~~~l~~ll~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  349 (454)
                      +  ....|+++.+++..+. ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.+..   
T Consensus       263 ~--~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---  337 (504)
T PLN00110        263 R--KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN---  337 (504)
T ss_pred             c--ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---
Confidence            2  1235899999976533 345699999999999999999999999999999999999999999999999998542   


Q ss_pred             CCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCC
Q 012872          350 QKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWD  428 (454)
Q Consensus       350 ~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl  428 (454)
                      .. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++||||++|+||||+
T Consensus       338 ~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        338 RR-LVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             CC-CCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence            22 8999999999999999999999999986 789999999999999999999999999999999999999999999999


Q ss_pred             CCCCee------eeccccccccccce
Q 012872          429 VSCRFV------YLNNLNMLVNAYAC  448 (454)
Q Consensus       429 ~~~~~~------~~~~~~f~~g~~~c  448 (454)
                      +++...      ....++||.|+|.|
T Consensus       417 ~~~~~~~~~~~~~~~~~pFG~G~R~C  442 (504)
T PLN00110        417 SEKNAKIDPRGNDFELIPFGAGRRIC  442 (504)
T ss_pred             CCCCcccccCCCeeeEeCCCCCCCCC
Confidence            643211      11345566666666


No 18 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1e-61  Score=466.98  Aligned_cols=378  Identities=19%  Similarity=0.277  Sum_probs=293.8

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.+|||+++|++||+..+.     .+++..+.+++++||+  +|++++++.+.++++||+.+++++.. ...|..+...
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~  100 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLG-----NLPHRDLTKMSKKYGG--IFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKI  100 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhc-----ccHHHHHHHHHHHhCC--eeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCc
Confidence            47789999999999998874     4788999999999999  99999999999999999999999987 4445443222


Q ss_pred             h-H-HhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHHHH
Q 012872          131 S-T-MELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFRII  204 (454)
Q Consensus       131 ~-~-~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~~~  204 (454)
                      . . ....| .+++..+|+.|+++|+++.+ .|+...+..+.+.+.++++.+++.|.    +++.+|+.+.+.+++++++
T Consensus       101 ~~~~~~~~~-~~l~~~~g~~w~~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi  178 (482)
T PTZ00404        101 PSIKHGTFY-HGIVTSSGEYWKRNREIVGK-AMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAM  178 (482)
T ss_pred             ceeeeeccC-CceeccChHHHHHHHHHHHH-HHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHH
Confidence            1 1 12233 77888999999999999999 88889999999999999999999874    3567999999999999999


Q ss_pred             HHHHcCCCChHH-------HHHHHHHHHHHhhhhhh------hhhccCCc--chHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          205 MYIFLSSESDHV-------LEALEREYTKLNCGVRA------MAINLPGF--AYHKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       205 ~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      +.++||.+.+..       ...+...+..+......      ++...|.+  ......+..+.+.+++.+.++++++..+
T Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  258 (482)
T PTZ00404        179 FKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTID  258 (482)
T ss_pred             HHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            999999875421       12233333222221110      01101110  0112234456677777777766655422


Q ss_pred             CCCCCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCC
Q 012872          270 DDNFPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPT  349 (454)
Q Consensus       270 ~~~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  349 (454)
                      .   ....|+++.+++..++. .....+++++++..+++||+|||+++++|++++|++||++|+++++|+++++++..  
T Consensus       259 ~---~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~--  332 (482)
T PTZ00404        259 P---EVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRN--  332 (482)
T ss_pred             C---CCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCC--
Confidence            1   12468999999764321 11223458899999999999999999999999999999999999999999986532  


Q ss_pred             CCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCcccee-cCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCC
Q 012872          350 QKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNI-SGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRW  427 (454)
Q Consensus       350 ~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rf  427 (454)
                       . ++.+++.+||||+|||+|+||++|+++. ++|.+.+|+++ +||.|||||.|+++.+++||||++||||++|+||||
T Consensus       333 -~-~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        333 -K-VLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             -C-CCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence             2 7899999999999999999999999995 78999999999 999999999999999999999999999999999999


Q ss_pred             CCCCCeeeeccccccccccce
Q 012872          428 DVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       428 l~~~~~~~~~~~~f~~g~~~c  448 (454)
                      +++..  .....+||.|+|.|
T Consensus       411 l~~~~--~~~~~pFg~G~R~C  429 (482)
T PTZ00404        411 LNPDS--NDAFMPFSIGPRNC  429 (482)
T ss_pred             CCCCC--CCceeccCCCCCCC
Confidence            97421  12345677777777


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.1e-61  Score=464.41  Aligned_cols=371  Identities=20%  Similarity=0.281  Sum_probs=295.2

Q ss_pred             CCCcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCC
Q 012872           48 GEKQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKP  126 (454)
Q Consensus        48 ~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~  126 (454)
                      ..++.+.||||+++|++||+.++     ..+++.++.++++|||+  +|++++++.+.++++||+.+++++.+ ...|.+
T Consensus        27 ~~~~~~~ppgp~~~pl~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~   99 (514)
T PLN03112         27 MRKSLRLPPGPPRWPIVGNLLQL-----GPLPHRDLASLCKKYGP--LVYLRLGSVDAITTDDPELIREILLRQDDVFAS   99 (514)
T ss_pred             ccCCCCCccCCCCCCeeeeHHhc-----CCchHHHHHHHHHHhCC--eEEEEecCccEEEECCHHHHHHHHHhCCccccc
Confidence            34446789999999999999877     35678899999999999  99999999999999999999999976 556665


Q ss_pred             CCchhH--HhhhcC-ccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHH
Q 012872          127 GWPAST--MELIGK-KSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRL  199 (454)
Q Consensus       127 ~~~~~~--~~~~g~-~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~  199 (454)
                      +.....  ...+|. .+++..+|+.|+.+|+.+.++.|+.++++.+.+.+.++++.+++.+.    +++++|+.+.++++
T Consensus       100 ~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~  179 (514)
T PLN03112        100 RPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAF  179 (514)
T ss_pred             CCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHH
Confidence            433211  122332 34556789999999999654489999999999999999999988743    35679999999999


Q ss_pred             HHHHHHHHHcCCCCh-------HHHHHHHHHHHHHhhhhh--h----hhh--cc-CCcchHHHHHHHHHHHHHHHHHHHH
Q 012872          200 TFRIIMYIFLSSESD-------HVLEALEREYTKLNCGVR--A----MAI--NL-PGFAYHKALKARKNLVATLQSVVDD  263 (454)
Q Consensus       200 ~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~~~--~----~~~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~  263 (454)
                      ++++++.++||.+..       .....+......+.....  .    ++.  ++ |....++..+..+.+.+++.+.+++
T Consensus       180 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (514)
T PLN03112        180 SMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE  259 (514)
T ss_pred             HHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998742       112223333332221110  1    111  11 1112345566778888899999988


Q ss_pred             HHhcCcCCC-CCCcCcHHHHhhcchhhcCC-CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 012872          264 RRNRSKDDN-FPKKKDMMDALLSVEDENGR-KLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEM  341 (454)
Q Consensus       264 ~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  341 (454)
                      +++..+... .....|+++.++++.++++. .++++++.+++..+++||+|||+++++|++++|++||++|+++|+|+++
T Consensus       260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        260 HRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             HHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            776533211 12346899999986544332 4899999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcc-cccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCC
Q 012872          342 IVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLT-VFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPK  420 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  420 (454)
                      +.++.+   . ++.+++.+|||++|||+|++|++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++||||+
T Consensus       340 ~~~~~~---~-~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~  415 (514)
T PLN03112        340 VVGRNR---M-VQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVE  415 (514)
T ss_pred             hcCCCC---c-CChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChh
Confidence            986432   2 8999999999999999999999999996 6899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC
Q 012872          421 EFNPSRWDV  429 (454)
Q Consensus       421 ~F~P~Rfl~  429 (454)
                      +|+||||.+
T Consensus       416 ~F~PeRf~~  424 (514)
T PLN03112        416 EFRPERHWP  424 (514)
T ss_pred             hcCCcccCC
Confidence            999999875


No 20 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.4e-60  Score=461.52  Aligned_cols=385  Identities=19%  Similarity=0.291  Sum_probs=286.4

Q ss_pred             ccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch
Q 012872           52 YSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA  130 (454)
Q Consensus        52 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~  130 (454)
                      .+.||||+++|++|++..+.    ....+..+.+++++||+  +|++++++.+.++++||+.+++++.+ ...|.++...
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~----~~~~~~~~~~~~~~yG~--v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVG----DDLNHRNLAEMAKKYGD--VFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcC----CCchhHHHHHHHHHhCC--eEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            57899999999999988763    23356899999999999  99999999999999999999999986 5556544322


Q ss_pred             hH-Hhhhc--CccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcC-----CCceeHHHHHHHHHHH
Q 012872          131 ST-MELIG--KKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSN-----LERIEFLTQLRRLTFR  202 (454)
Q Consensus       131 ~~-~~~~g--~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-----~~~vdl~~~~~~~~~~  202 (454)
                      .. ..+.|  ..+++..+|+.|+++|+.+..++|+++.+..+.+.++++++++++.+.+     ++.+|+.+.+..+++|
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~d  182 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYN  182 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHH
Confidence            22 22222  2457778899999999999733899889999999999999999998852     3468999999999999


Q ss_pred             HHHHHHcCCCChHHHHHHHHHHHHHhh----hhh----hhhhccCCc-----ch-HHHHHHHHHHHH-HHHHHHHHHHhc
Q 012872          203 IIMYIFLSSESDHVLEALEREYTKLNC----GVR----AMAINLPGF-----AY-HKALKARKNLVA-TLQSVVDDRRNR  267 (454)
Q Consensus       203 ~~~~~~fG~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~p~~-----~~-~~~~~~~~~~~~-~~~~~i~~~~~~  267 (454)
                      +++.++||.+++...+.....+.....    ...    .+...+|..     .. +........... +....++++++.
T Consensus       183 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        183 IMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999865322111111111111    000    000111111     01 111111122222 333456666543


Q ss_pred             CcCC--CCCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhc
Q 012872          268 SKDD--NFPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKK  345 (454)
Q Consensus       268 ~~~~--~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  345 (454)
                      .+..  +.....|+++.+++..++  ..++++++..++..+++||+|||+++++|++|+|++||++|++||+|++++.+.
T Consensus       263 ~~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~  340 (503)
T PLN02394        263 MSAKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP  340 (503)
T ss_pred             hhhccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence            2211  112346899999987543  248999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCccc-ccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCC
Q 012872          346 RPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTV-FREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNP  424 (454)
Q Consensus       346 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P  424 (454)
                      +   .. ++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++||||++||||++|+|
T Consensus       341 ~---~~-~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~P  416 (503)
T PLN02394        341 G---NQ-VTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRP  416 (503)
T ss_pred             C---CC-CCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCc
Confidence            2   22 78999999999999999999999999964 6999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--ee---eeccccccccccce
Q 012872          425 SRWDVSCR--FV---YLNNLNMLVNAYAC  448 (454)
Q Consensus       425 ~Rfl~~~~--~~---~~~~~~f~~g~~~c  448 (454)
                      |||++++.  ..   .....+||.|+|.|
T Consensus       417 eRwl~~~~~~~~~~~~~~~~pFg~G~R~C  445 (503)
T PLN02394        417 ERFLEEEAKVEANGNDFRFLPFGVGRRSC  445 (503)
T ss_pred             cccCCCCCcccccCCCCceeCCCCCCCCC
Confidence            99996431  11   11234455555555


No 21 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=7.7e-60  Score=454.16  Aligned_cols=370  Identities=19%  Similarity=0.312  Sum_probs=280.7

Q ss_pred             cccCCCcCcCCccccchHHHHHHhhcCCc-hHHHHHHHHHh-CCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCC
Q 012872           51 QYSLPPGDMGWPFIGNMWSFLRAFKTTHP-DSFVDSFVSRF-GRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPG  127 (454)
Q Consensus        51 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~-~~~~~~~~~ky-G~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~  127 (454)
                      ..+.||||+++|++||++++..    ..+ ..++.++.++| |+  ||++++|+.+.++++||+.+++++.+ ...|..+
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~--i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~r  111 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTD--IACFNFAGTHTITINSDEIAREAFRERDADLADR  111 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCC--eEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCC
Confidence            3457999999999999988741    222 24566777776 78  99999999999999999999999987 5557766


Q ss_pred             CchhHHhhhcCc--ccccc-CcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHH
Q 012872          128 WPASTMELIGKK--SFIGI-SYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLT  200 (454)
Q Consensus       128 ~~~~~~~~~g~~--~~~~~-~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~  200 (454)
                      +.......++..  +++.. +|+.|+++|+++.+.+++......+.+..+.+++++++.+.    .++++|+.+.+.+++
T Consensus       112 p~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t  191 (534)
T PLN03018        112 PQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYG  191 (534)
T ss_pred             CCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHH
Confidence            544333334432  45555 49999999999998555655555566666666777777664    345799999999999


Q ss_pred             HHHHHHHHcCCCChHH----------HHHHHHHHHHHhhhhhhh---------hhccCCc----chHHHHHHHHHHHHHH
Q 012872          201 FRIIMYIFLSSESDHV----------LEALEREYTKLNCGVRAM---------AINLPGF----AYHKALKARKNLVATL  257 (454)
Q Consensus       201 ~~~~~~~~fG~~~~~~----------~~~~~~~~~~~~~~~~~~---------~~~~p~~----~~~~~~~~~~~~~~~~  257 (454)
                      +++++.++||.+....          ...+..........+..+         +.++..+    ...+.....+.+.+++
T Consensus       192 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  271 (534)
T PLN03018        192 YAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYN  271 (534)
T ss_pred             HHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHH
Confidence            9999999999985311          011111111111111111         1111100    1123333456678888


Q ss_pred             HHHHHHHHhcCcCC-CCCCcCcHHHHhhcchhhcCC-CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHH
Q 012872          258 QSVVDDRRNRSKDD-NFPKKKDMMDALLSVEDENGR-KLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKA  335 (454)
Q Consensus       258 ~~~i~~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  335 (454)
                      .++|+++++..++. ......|+++.+++..++++. .++++++++++.++++||+|||+++++|++++|+.||++|+++
T Consensus       272 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        272 NPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            88888887643321 111235899999986554333 4899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCccc-ccccCccceecCEEeCCCCEEEEeccccccCCC
Q 012872          336 KAEQEMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTV-FREAKTDVNISGYTIPKGWKVLVWFRSVHLDPE  414 (454)
Q Consensus       336 r~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~  414 (454)
                      ++||+++++..   .. ++.+++.+||||+|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++.+++||||+
T Consensus       352 ~~Ei~~v~~~~---~~-~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~  427 (534)
T PLN03018        352 LKELDEVVGKD---RL-VQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPK  427 (534)
T ss_pred             HHHHHHHhCCC---CC-CCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcc
Confidence            99999998542   22 89999999999999999999999999975 699999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC
Q 012872          415 IYPNPKEFNPSRWDVS  430 (454)
Q Consensus       415 ~~~dp~~F~P~Rfl~~  430 (454)
                      +|+||++|+||||+++
T Consensus       428 ~~~~p~~F~PeRfl~~  443 (534)
T PLN03018        428 IWKDPLVYEPERHLQG  443 (534)
T ss_pred             cCCCccccCCccCCCC
Confidence            9999999999999964


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.2e-61  Score=464.91  Aligned_cols=385  Identities=26%  Similarity=0.446  Sum_probs=309.7

Q ss_pred             CCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch-hH
Q 012872           55 PPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA-ST  132 (454)
Q Consensus        55 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~-~~  132 (454)
                      ||||+++|++||+.++.+   .++++.++.+++++||+  ||++++++.+.++|+||+.+++++.. ...+...+.. ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~--i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~   75 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGP--IFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWF   75 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTS--EEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCC--EEEEeEecccccccccchhhcccccccccccccccccccc
Confidence            799999999999999963   36778899999999999  99999999999999999999999999 4455554222 22


Q ss_pred             H---hhhcCccccccCcHHHHHHHhhhcCCCCChh-HHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHHHH
Q 012872          133 M---ELIGKKSFIGISYEEHKRLRRLTAAPVNGHE-ALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFRII  204 (454)
Q Consensus       133 ~---~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~~~  204 (454)
                      .   ...++.+++..+++.|+.+|+.+.+ .|+.. .+ .+.+.+++.++.+++.+.    ..+.+|+.+.++.++++++
T Consensus        76 ~~~~~~~~~~~l~~~~~~~~~~~R~~~~~-~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i  153 (463)
T PF00067_consen   76 EIFRGPFGGKGLFFSDGERWRRQRRLLAP-AFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVI  153 (463)
T ss_dssp             HHHHHHHTTTSSTTSSHHHHHHHHHHHHH-HHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccc-cccccccc-ccccccccccccccccccccccccceeeeeccccccccccc
Confidence            2   2345588999999999999999999 66656 55 899999999999999986    2236999999999999999


Q ss_pred             HHHHcCCCChHH----HHHHHHHHHHHhhhh--------hhhh--hccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcC
Q 012872          205 MYIFLSSESDHV----LEALEREYTKLNCGV--------RAMA--INLPGFAYHKALKARKNLVATLQSVVDDRRNRSKD  270 (454)
Q Consensus       205 ~~~~fG~~~~~~----~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (454)
                      +.++||.+++..    ...+.+.+..+...+        ..++  .++|....++..++.+.+.+++.+.++++++..+.
T Consensus       154 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  154 GRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccccccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999985411    223344444432211        1122  12344445566667789999999999999987665


Q ss_pred             CCCCCcCcHHHHhhcch-hhcC-CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCC
Q 012872          271 DNFPKKKDMMDALLSVE-DENG-RKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPP  348 (454)
Q Consensus       271 ~~~~~~~~~l~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  348 (454)
                      + .....|+++.++... +.++ ..++++++++++..+++||++||+.+++|++++|++||++|+++|+|++++.++.. 
T Consensus       234 ~-~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~-  311 (463)
T PF00067_consen  234 G-DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR-  311 (463)
T ss_dssp             S-SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS-
T ss_pred             c-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            5 234579999999987 3434 37999999999999999999999999999999999999999999999999984332 


Q ss_pred             CCCCCCHHHhhcCccHHHHHHhhhcCcCCCc-ccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCC
Q 012872          349 TQKGLTLKEIREMDYLSKVVDETLRIITFSL-TVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRW  427 (454)
Q Consensus       349 ~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rf  427 (454)
                         .++.+++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus       312 ---~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~  388 (463)
T PF00067_consen  312 ---EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERF  388 (463)
T ss_dssp             ---SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGG
T ss_pred             ---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               2899999999999999999999999999 788999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeeeccccccccccceeee
Q 012872          428 DVSCRFVYLNNLNMLVNAYACHIS  451 (454)
Q Consensus       428 l~~~~~~~~~~~~f~~g~~~ch~~  451 (454)
                      ++.+.........|..||.|.|.|
T Consensus       389 ~~~~~~~~~~~~~~~~Fg~G~r~C  412 (463)
T PF00067_consen  389 LDERGISNRPSFAFLPFGAGPRMC  412 (463)
T ss_dssp             BTTTSTBCSSSTTSSTTESSTTS-
T ss_pred             cccccccccccccccccccccccc
Confidence            987652222333344444444444


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.1e-59  Score=453.96  Aligned_cols=384  Identities=17%  Similarity=0.232  Sum_probs=288.3

Q ss_pred             CCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHh---CCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCc
Q 012872           54 LPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRF---GRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWP  129 (454)
Q Consensus        54 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~ky---G~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~  129 (454)
                      .+|||+++|++||++.+..     + +..+.+|.++|   |+  +|++++++.+.++++||+.+++++.+ ...+.+...
T Consensus        31 ~~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~  102 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDR--TVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEV  102 (516)
T ss_pred             ccCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCC--cEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHh
Confidence            4689999999999877652     2 23456677777   78  99999999999999999999999987 344544322


Q ss_pred             h--hHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHH-HHHHHHHHHhhc----CCCceeHHHHHHHHHHH
Q 012872          130 A--STMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYI-EDIVTSALDKWS----NLERIEFLTQLRRLTFR  202 (454)
Q Consensus       130 ~--~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~  202 (454)
                      .  ....+.| .+++..+|+.|+++|+++.+ .|+..+++.+.+.+ .+.++.+++.+.    +++.+|+.+++..++++
T Consensus       103 ~~~~~~~~~g-~~l~~~~g~~w~~~Rr~l~~-~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  180 (516)
T PLN03195        103 YHSYMEVLLG-DGIFNVDGELWRKQRKTASF-EFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLD  180 (516)
T ss_pred             HHHHHHHHhc-CeeeccCcHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHH
Confidence            1  1123345 67888899999999999999 88889999999876 555555555443    45679999999999999


Q ss_pred             HHHHHHcCCCChHHH-----HHHHHHHHHHhhhhh--hh-hh-----ccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          203 IIMYIFLSSESDHVL-----EALEREYTKLNCGVR--AM-AI-----NLPGFAYHKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       203 ~~~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~--~~-~~-----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      +++.++||.+++...     ..+...+........  .+ +.     +++....++..+..+.+.+++.+.++++++...
T Consensus       181 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        181 SICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             HHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999864321     123222222221110  00 10     111111223345667788888889988876533


Q ss_pred             CCC---CCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcC
Q 012872          270 DDN---FPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKR  346 (454)
Q Consensus       270 ~~~---~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  346 (454)
                      +++   .....|+++.+++..++++..++++++++++.++++||+|||+++++|++|+|++||++|+++|+|++++.++.
T Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        261 EARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            211   11345899999976544344699999999999999999999999999999999999999999999999987532


Q ss_pred             -----------------CCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCcccee-cCEEeCCCCEEEEeccc
Q 012872          347 -----------------PPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNI-SGYTIPKGWKVLVWFRS  408 (454)
Q Consensus       347 -----------------~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~  408 (454)
                                       +.+.. ++++++.+||||+|||+|+||++|+++...|.+.+|.++ +|+.|||||.|.++.++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGL-LTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCC-CCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                             00122 899999999999999999999999999888888887766 89999999999999999


Q ss_pred             cccCCCCC-CCCCCCCCCCCCCCCCe---eeeccccccccccce
Q 012872          409 VHLDPEIY-PNPKEFNPSRWDVSCRF---VYLNNLNMLVNAYAC  448 (454)
Q Consensus       409 ~~~d~~~~-~dp~~F~P~Rfl~~~~~---~~~~~~~f~~g~~~c  448 (454)
                      +||||++| |||++|+||||++++..   ......+||.|+|.|
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~C  463 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRIC  463 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcC
Confidence            99999999 99999999999964321   111234566666666


No 24 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.5e-59  Score=447.35  Aligned_cols=377  Identities=16%  Similarity=0.267  Sum_probs=290.8

Q ss_pred             CCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCchhHH
Q 012872           55 PPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPASTM  133 (454)
Q Consensus        55 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~~~~  133 (454)
                      ||||+++|++||++++.    ..+++..+.+++++||+  +|++++++.+.++|+||+.+++++.+ ...|.++......
T Consensus         1 ppgp~~lP~iG~l~~~~----~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~   74 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLK----EKKPHRTFTKWSEIYGP--IYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL   74 (466)
T ss_pred             CcCCCCCCccccHHHcC----CCchhHHHHHHHHHhCC--eEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH
Confidence            68999999999998885    35688999999999999  99999999999999999999999987 6666665433322


Q ss_pred             h-hhcCc-cccccC-cHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc------CCCceeHHHHHHHHHHHHH
Q 012872          134 E-LIGKK-SFIGIS-YEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS------NLERIEFLTQLRRLTFRII  204 (454)
Q Consensus       134 ~-~~g~~-~~~~~~-~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~------~~~~vdl~~~~~~~~~~~~  204 (454)
                      . +.|+. .++..+ |+.|+++|+.+.+++++...++.+.+.+++.++.+++.+.      .++++|+.+.+++++++++
T Consensus        75 ~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi  154 (466)
T PLN02655         75 TVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLS  154 (466)
T ss_pred             HHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHH
Confidence            3 33423 344444 8999999987776588877888888888888777776653      3567999999999999999


Q ss_pred             HHHHcCCCChHHH-----------HHHHHHHHHHhhhhh------hhh--hccCCcchHH-HHHHHHHHHHHHHHHHHHH
Q 012872          205 MYIFLSSESDHVL-----------EALEREYTKLNCGVR------AMA--INLPGFAYHK-ALKARKNLVATLQSVVDDR  264 (454)
Q Consensus       205 ~~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~p~~~~~~-~~~~~~~~~~~~~~~i~~~  264 (454)
                      +.++||.+.+...           ..+...+..+.....      .++  .++|...+.+ ..+....+.+++.++++++
T Consensus       155 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  234 (466)
T PLN02655        155 LIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQ  234 (466)
T ss_pred             HHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998854321           111112222211111      111  1223221222 2223344567888888877


Q ss_pred             HhcCcCCCCCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHh
Q 012872          265 RNRSKDDNFPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVK  344 (454)
Q Consensus       265 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  344 (454)
                      ++....+.  ...|+++.++...    ..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|++++.+
T Consensus       235 ~~~~~~~~--~~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        235 KKRIARGE--ERDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             HHhhcCCC--CcccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            76544332  2358999999764    25899999999999999999999999999999999999999999999999986


Q ss_pred             cCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCccc-ccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCC
Q 012872          345 KRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTV-FREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFN  423 (454)
Q Consensus       345 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~  423 (454)
                      ..    . ++.+++.++|||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+
T Consensus       309 ~~----~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~  383 (466)
T PLN02655        309 DE----R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWD  383 (466)
T ss_pred             CC----C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccC
Confidence            42    2 89999999999999999999999999865 699999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCe--eeeccccccccccce
Q 012872          424 PSRWDVSCRF--VYLNNLNMLVNAYAC  448 (454)
Q Consensus       424 P~Rfl~~~~~--~~~~~~~f~~g~~~c  448 (454)
                      ||||++++..  ......+||.|+|.|
T Consensus       384 PeR~~~~~~~~~~~~~~~~Fg~G~r~C  410 (466)
T PLN02655        384 PERFLGEKYESADMYKTMAFGAGKRVC  410 (466)
T ss_pred             ccccCCCCcccCCcccccCCCCCCCCC
Confidence            9999974321  112345566666665


No 25 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.6e-59  Score=446.65  Aligned_cols=379  Identities=13%  Similarity=0.221  Sum_probs=284.2

Q ss_pred             CCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEE---EeccCCcEEEEeChHHHhhhhcC-CCccCCCCc
Q 012872           54 LPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYK---AFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWP  129 (454)
Q Consensus        54 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~---~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~  129 (454)
                      ..|||+++|++||+..+...  .....+++.+..++||.  .++   .++|+.+.++++||+.+++|+.+ ...|.++..
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~  107 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQ--IPRIYDWTVEVLEASNL--TFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE  107 (500)
T ss_pred             CCCCCCCCCcccchHHHHHc--cCcHHHHHHHHHHhCCC--cEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence            45788899999999877532  22234555555666887  555   67788999999999999999987 455555432


Q ss_pred             h-hHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHH--hHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHH
Q 012872          130 A-STMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSV--YVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFR  202 (454)
Q Consensus       130 ~-~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~  202 (454)
                      . .....+| .+++.++|+.|+++||++.+ .|+...+..  +.+.+++.++.+++.+.    +++++|+.+.+.++++|
T Consensus       108 ~~~~~~~~g-~gl~~~~g~~Wr~~Rk~l~p-~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d  185 (500)
T PLN02169        108 FKKIFDVLG-EGILTVDFELWEDLRKSNHA-LFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD  185 (500)
T ss_pred             HHHHHHhhc-CcccccCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence            2 2234456 89999999999999999998 888777654  23666676677766654    35679999999999999


Q ss_pred             HHHHHHcCCCChHHH-----HHHHHHHHHHhhh-----hhh-----hhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhc
Q 012872          203 IIMYIFLSSESDHVL-----EALEREYTKLNCG-----VRA-----MAINLPGFAYHKALKARKNLVATLQSVVDDRRNR  267 (454)
Q Consensus       203 ~~~~~~fG~~~~~~~-----~~~~~~~~~~~~~-----~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  267 (454)
                      +++.++||.+.+...     ..+...+......     +..     ++.+++....++..++.+.+.+++.++|+++++.
T Consensus       186 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~  265 (500)
T PLN02169        186 TSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKE  265 (500)
T ss_pred             HHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998753211     1222222221111     001     1112222234566788889999999999988764


Q ss_pred             CcCC--CCCCcCcHHHHhhcchhhc---CCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 012872          268 SKDD--NFPKKKDMMDALLSVEDEN---GRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMI  342 (454)
Q Consensus       268 ~~~~--~~~~~~~~l~~ll~~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  342 (454)
                      ..+.  ......|+++.+++....+   +.+++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++
T Consensus       266 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v  345 (500)
T PLN02169        266 EISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK  345 (500)
T ss_pred             hhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence            2211  1112368999998764321   2347899999999999999999999999999999999999999999999886


Q ss_pred             HhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCcccee-cCEEeCCCCEEEEeccccccCCCCC-CCCC
Q 012872          343 VKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNI-SGYTIPKGWKVLVWFRSVHLDPEIY-PNPK  420 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~  420 (454)
                                ++.+++.+||||+|||+|+||++|++|...|.+.+|.++ +|+.|||||.|+++.+++||||++| |||+
T Consensus       346 ----------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        346 ----------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             ----------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence                      678999999999999999999999999988888877665 9999999999999999999999999 8999


Q ss_pred             CCCCCCCCCCCCe-e---eeccccccccccce
Q 012872          421 EFNPSRWDVSCRF-V---YLNNLNMLVNAYAC  448 (454)
Q Consensus       421 ~F~P~Rfl~~~~~-~---~~~~~~f~~g~~~c  448 (454)
                      +|+||||++++.. .   .....+||.|+|.|
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~C  447 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTC  447 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCC
Confidence            9999999964321 1   11234455555555


No 26 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-59  Score=421.32  Aligned_cols=387  Identities=19%  Similarity=0.322  Sum_probs=312.3

Q ss_pred             cccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEe-ccCCcEEEEeChHHHhhhhcCCCccCCCC-
Q 012872           51 QYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAF-MFGNPSIIVTTPETCKRVLTDDDAFKPGW-  128 (454)
Q Consensus        51 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~-~~~~~~vvi~~~~~~~~i~~~~~~~~~~~-  128 (454)
                      ++...|||+++|++|.+.. ++.....+.++....++++||+  ||+.. +|+...|.+.+|++++.++.++...-.++ 
T Consensus        48 ~~~~IP~p~~~~~l~~l~~-~~~~~~~~lh~~~~~~~~~YG~--I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~  124 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWI-WRAGGATKLHQHIVQLHQKYGP--IFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPL  124 (519)
T ss_pred             ChhhcCCCCCccHHHHHHH-HHhhhhhHHHHHHHHHHHHcCc--eeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccc
Confidence            3667899999999998875 3333457888999999999999  99999 77799999999999999999943222221 


Q ss_pred             --ch--hHHhhh-cCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc-------CCCceeHHHHH
Q 012872          129 --PA--STMELI-GKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS-------NLERIEFLTQL  196 (454)
Q Consensus       129 --~~--~~~~~~-g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~-------~~~~vdl~~~~  196 (454)
                        ..  ...+.. +..|++..+|++|.+.|..+++.++.++.++.|.+.+++.+++++..+.       .....|+.+.+
T Consensus       125 ~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  125 LIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             ccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence              11  123333 5589999999999999999999999999999999999999999998865       12367999999


Q ss_pred             HHHHHHHHHHHHcCCCChHH-------HHHHHHHHHHHhhhh----hh--hhhccCCcchHHHHHHHHHHHHHHHHHHHH
Q 012872          197 RRLTFRIIMYIFLSSESDHV-------LEALEREYTKLNCGV----RA--MAINLPGFAYHKALKARKNLVATLQSVVDD  263 (454)
Q Consensus       197 ~~~~~~~~~~~~fG~~~~~~-------~~~~~~~~~~~~~~~----~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~  263 (454)
                      .+++++.+|.++||.+.+..       .+.+.+....+....    ..  +...++...+++..++.+.+.++..+.|++
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999996532       233333333333221    11  222356667889999999999999999999


Q ss_pred             HHhcCcCCCCC--CcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 012872          264 RRNRSKDDNFP--KKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEM  341 (454)
Q Consensus       264 ~~~~~~~~~~~--~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  341 (454)
                      ..+.++.+...  +....+-.++...     .++.+++..+++.++.||.|||+++++|+||+|++||++|++|++|+.+
T Consensus       285 ~l~~l~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~  359 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILA  359 (519)
T ss_pred             HHHHHHhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHh
Confidence            98877665332  2223333333322     4899999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCC
Q 012872          342 IVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKE  421 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~  421 (454)
                      +.+..   ...++.+++.++|||.||||||+||||.+++..|...+|.+++||.|||||.|.++.+.+.+||++|++|++
T Consensus       360 ~~p~~---~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  360 VLPSG---NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             hCCCc---ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            98653   222899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-Cee-eeccccccccccce
Q 012872          422 FNPSRWDVSC-RFV-YLNNLNMLVNAYAC  448 (454)
Q Consensus       422 F~P~Rfl~~~-~~~-~~~~~~f~~g~~~c  448 (454)
                      |+|||||+++ +.. ..-+.+||.|.|.|
T Consensus       437 F~PeRWL~~~~~~~~pF~~LPFGfG~R~C  465 (519)
T KOG0159|consen  437 FLPERWLKPSTKTIHPFASLPFGFGPRMC  465 (519)
T ss_pred             cChhhhcccccCCCCCceecCCCCCcccc
Confidence            9999999865 322 22455677777777


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.7e-58  Score=447.08  Aligned_cols=344  Identities=19%  Similarity=0.339  Sum_probs=271.8

Q ss_pred             hhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCchhHHhhhcCccccccCcHHHHHH
Q 012872           74 FKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPASTMELIGKKSFIGISYEEHKRL  152 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  152 (454)
                      +..+..+..+.++|+|||+  ||++++|+.++++|+||+.+++++.. ...|.++..........+.+++..+++.|+.+
T Consensus       148 i~~g~~~~~l~~lh~kYGp--I~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~r  225 (633)
T PLN02738        148 VRGEAFFIPLYELFLTYGG--IFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVR  225 (633)
T ss_pred             hcCchHHHHHHHHHHHhCC--EEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHH
Confidence            3367788999999999999  99999988899999999999999987 44565543332222333367888999999999


Q ss_pred             HhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCceeHHHHHHHHHHHHHHHHHcCCCChHHH------HHHHH
Q 012872          153 RRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLERIEFLTQLRRLTFRIIMYIFLSSESDHVL------EALER  222 (454)
Q Consensus       153 R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~------~~~~~  222 (454)
                      |+.+.+ +|+...+..+.+.+.++++++++.+.    .++.+|+...+..+++|+++.++||.+++...      ..+..
T Consensus       226 Rr~l~p-~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~  304 (633)
T PLN02738        226 RRAIVP-ALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYT  304 (633)
T ss_pred             HHhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHH
Confidence            999999 99989999999999999999998885    36689999999999999999999999865311      11222


Q ss_pred             HHHHHhhh-hhhhh-hccCCc-----chHHHHHHHHHHHHHHHHHHHHHHhcCcCC--------CCCCcCcHHHHhhcch
Q 012872          223 EYTKLNCG-VRAMA-INLPGF-----AYHKALKARKNLVATLQSVVDDRRNRSKDD--------NFPKKKDMMDALLSVE  287 (454)
Q Consensus       223 ~~~~~~~~-~~~~~-~~~p~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~~~l~~ll~~~  287 (454)
                      .+...... ...++ +.+|.+     ..++..+..+.+.+.+..+++.+++..++.        ......++++.+++..
T Consensus       305 ~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~  384 (633)
T PLN02738        305 VLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG  384 (633)
T ss_pred             HHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC
Confidence            22211110 11111 111211     123334455566666666666544321110        0123358999998753


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCccHHHH
Q 012872          288 DENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDYLSKV  367 (454)
Q Consensus       288 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~  367 (454)
                          ..++++++.+++..+++||+|||+++|+|++++|++||++|+|||+|+++++++    .. ++++++++||||+||
T Consensus       385 ----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~----~~-~t~edL~kLPYL~AV  455 (633)
T PLN02738        385 ----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD----RF-PTIEDMKKLKYTTRV  455 (633)
T ss_pred             ----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC----CC-CCHHHHccCHHHHHH
Confidence                258999999999999999999999999999999999999999999999999863    22 899999999999999


Q ss_pred             HHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCC
Q 012872          368 VDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDV  429 (454)
Q Consensus       368 i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~  429 (454)
                      |+|+||++|+++.++|.+.+|.+++||.|||||.|+++.+.+||||++||||++|+||||+.
T Consensus       456 IkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~  517 (633)
T PLN02738        456 INESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPL  517 (633)
T ss_pred             HHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCC
Confidence            99999999999988899999999999999999999999999999999999999999999985


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-57  Score=399.08  Aligned_cols=363  Identities=23%  Similarity=0.424  Sum_probs=307.0

Q ss_pred             cCCCcCcCC-ccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcCC-CccCC--CC
Q 012872           53 SLPPGDMGW-PFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTDD-DAFKP--GW  128 (454)
Q Consensus        53 ~~ppgp~~~-P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~~-~~~~~--~~  128 (454)
                      ..||.-++| ||+|++..|     ++++.++++++++|||+  ||++.++|+.+.++.+|+....+++.. ...+.  -+
T Consensus        31 ~~PPli~gwiP~lG~a~~f-----gk~P~eFl~~~~~K~Gd--VFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~  103 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-----GKDPLEFLRECRKKYGD--VFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAY  103 (486)
T ss_pred             CCCcccccCcchhhHHHHh-----ccCHHHHHHHHHHhcCC--eEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHH
Confidence            578887776 999999999     69999999999999999  999999999999999999999999984 33332  12


Q ss_pred             chhHHhhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHh-hc-CCCceeHHHHHHHHHHHHHHH
Q 012872          129 PASTMELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDK-WS-NLERIEFLTQLRRLTFRIIMY  206 (454)
Q Consensus       129 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~-~~~~vdl~~~~~~~~~~~~~~  206 (454)
                      .....+.+|.......++.....+.+.+.. .+...+++++.+.+.+++++.+.. |. .+.+..+.++...+.+.+.-.
T Consensus       104 ~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~-~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~  182 (486)
T KOG0684|consen  104 SKLTTPVFGKGVVYDVPNHVMMEQKKFFKS-ALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRL  182 (486)
T ss_pred             HHhhhhhcCCCccccCCCchHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHH
Confidence            233466777555556777888888888888 777799999999999999999988 55 445566777777777777777


Q ss_pred             HHcCCCChHHHHHHHHHHHHHhhhhhh----hhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCcCcHHHH
Q 012872          207 IFLSSESDHVLEALEREYTKLNCGVRA----MAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNFPKKKDMMDA  282 (454)
Q Consensus       207 ~~fG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~  282 (454)
                      .+||+......++....+.++..++..    +|.++|....++..++++++.+.+...|.++++...+    ...|++..
T Consensus       183 ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~----~~~dmlq~  258 (486)
T KOG0684|consen  183 LLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISK----WDNDMLQS  258 (486)
T ss_pred             hhhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcccc----ccHHHHHH
Confidence            777776555556666677776666555    4446777778888899999999999999999987432    34588988


Q ss_pred             hhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCc
Q 012872          283 LLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMD  362 (454)
Q Consensus       283 ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~  362 (454)
                      +++ ..+++.+.+++|++..++.++|||++||+.|.+|++++|++|||+++.+++|+.++++.+...   ++.++|+.||
T Consensus       259 l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~---l~~d~L~~lp  334 (486)
T KOG0684|consen  259 LME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEK---LTYDQLKDLP  334 (486)
T ss_pred             HHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCC---CCHHHHhcch
Confidence            888 556677899999999999999999999999999999999999999999999999999654332   9999999999


Q ss_pred             cHHHHHHhhhcCcCCCcccccccCccceecC----EEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCCC
Q 012872          363 YLSKVVDETLRIITFSLTVFREAKTDVNISG----YTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDVSC  431 (454)
Q Consensus       363 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~  431 (454)
                      +|++||+|||||+||.+.+.|.+.+|+++.+    |.||+|..|.++++.+||||++||||+.|+|+||++++
T Consensus       335 lL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~  407 (486)
T KOG0684|consen  335 LLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDN  407 (486)
T ss_pred             HHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCC
Confidence            9999999999999998899999999999965    99999999999999999999999999999999999744


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.7e-56  Score=429.54  Aligned_cols=365  Identities=21%  Similarity=0.317  Sum_probs=289.9

Q ss_pred             cCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCchh
Q 012872           53 SLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPAS  131 (454)
Q Consensus        53 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~~  131 (454)
                      .+-.|..|||++|..+++.....++.++..+.+|+++||+  +|++++|+.+.+++++|+++++++.. ...|.+.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~   89 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGP--VYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE   89 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCC--EEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh
Confidence            3457888999999999998888788899999999999999  99999999999999999999999987 46666554332


Q ss_pred             HH-hhhcCccccccCcHHHHHHHhhhcCCCCChhHHHHhHH-HHHHHHHHHHHhhc----CCCceeHHHHHHHHHHHHHH
Q 012872          132 TM-ELIGKKSFIGISYEEHKRLRRLTAAPVNGHEALSVYVH-YIEDIVTSALDKWS----NLERIEFLTQLRRLTFRIIM  205 (454)
Q Consensus       132 ~~-~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~~----~~~~vdl~~~~~~~~~~~~~  205 (454)
                      .. ...| .+++..+|+.|+++|+.+.+ .|+..++..+.+ .+.++++.+++.+.    +++++|+.+.++++++++++
T Consensus        90 ~~~~~~~-~~i~~~~g~~wk~~Rk~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         90 VSEFLFG-SGFAIAEGELWTARRRAVVP-SLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             hhHHHhc-CccccCCchHHHHHHHhhcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            22 2345 77888999999999999999 888788887755 67888888888764    35689999999999999999


Q ss_pred             HHHcCCCChHHH--HHHHHHHHHHhhhh-----hhhhhc-cC-----CcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCC
Q 012872          206 YIFLSSESDHVL--EALEREYTKLNCGV-----RAMAIN-LP-----GFAYHKALKARKNLVATLQSVVDDRRNRSKDDN  272 (454)
Q Consensus       206 ~~~fG~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~-~p-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  272 (454)
                      .++||.+.+...  ..+.+.........     ..++.+ .+     ....++..++.+.+.+.+.+.++++++..++..
T Consensus       168 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~  247 (489)
T PLN02936        168 LSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEG  247 (489)
T ss_pred             HHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999965321  11111111111110     011110 00     011235566777888888888887765432111


Q ss_pred             ---------CCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 012872          273 ---------FPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIV  343 (454)
Q Consensus       273 ---------~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  343 (454)
                               .....++++.++...+    .++++++.+++.++++||+|||+++++|++|+|++||++|+++|+|+++++
T Consensus       248 ~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~  323 (489)
T PLN02936        248 EVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVL  323 (489)
T ss_pred             cccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence                     0123579999986542    489999999999999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccc-cccCccceecCEEeCCCCEEEEeccccccCCCCCCCCCCC
Q 012872          344 KKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVF-REAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYPNPKEF  422 (454)
Q Consensus       344 ~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  422 (454)
                      +..    . ++++++++||||+|||+|+||++|+++... |.+.+|+.++||.||||+.|+++.+++||||++||||++|
T Consensus       324 ~~~----~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  398 (489)
T PLN02936        324 QGR----P-PTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEF  398 (489)
T ss_pred             cCC----C-CCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcccc
Confidence            632    2 789999999999999999999999988655 5556777789999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 012872          423 NPSRWDVS  430 (454)
Q Consensus       423 ~P~Rfl~~  430 (454)
                      +||||+++
T Consensus       399 ~PeRwl~~  406 (489)
T PLN02936        399 VPERFDLD  406 (489)
T ss_pred             CccccCCC
Confidence            99999964


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1e-53  Score=409.58  Aligned_cols=365  Identities=18%  Similarity=0.253  Sum_probs=278.0

Q ss_pred             CccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcEEEEeChHHHhhhhcC-CCccCCCCch-h-HHhhhc
Q 012872           61 WPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPSIIVTTPETCKRVLTD-DDAFKPGWPA-S-TMELIG  137 (454)
Q Consensus        61 ~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~vvi~~~~~~~~i~~~-~~~~~~~~~~-~-~~~~~g  137 (454)
                      .++.|+.....     .+...++..+.++++. .+++++.++.  ++++||+.+++++.. ...|.++... . .....|
T Consensus        49 ~~~~g~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g  120 (502)
T PLN02426         49 AYLTASWAKDF-----DNLCDWYAHLLRRSPT-GTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG  120 (502)
T ss_pred             CCccHHHHHhc-----ccHHHHHHHHHHhCCC-cEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC
Confidence            45677765542     3556777678888873 2788876554  899999999999987 4556544322 2 234556


Q ss_pred             CccccccCcHHHHHHHhhhcCCCCChhHHHHhH--HHHHHHHHHHHHhhc------CCCceeHHHHHHHHHHHHHHHHHc
Q 012872          138 KKSFIGISYEEHKRLRRLTAAPVNGHEALSVYV--HYIEDIVTSALDKWS------NLERIEFLTQLRRLTFRIIMYIFL  209 (454)
Q Consensus       138 ~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~~------~~~~vdl~~~~~~~~~~~~~~~~f  209 (454)
                       .+++..+|+.|+++||.+.+ .|+...+..+.  +.+++.++.+++.+.      +++++|+.++++++++|+++.++|
T Consensus       121 -~gi~~~~g~~wk~~Rk~l~~-~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  198 (502)
T PLN02426        121 -RGIFNVDGDSWRFQRKMASL-ELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSF  198 (502)
T ss_pred             -CceeecCcHHHHHHHHHhHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHh
Confidence             68999999999999999998 88888888764  566666666766653      135799999999999999999999


Q ss_pred             CCCChHHH-----HHHHHHHHHHhhh-----hhhhh------hccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCC
Q 012872          210 SSESDHVL-----EALEREYTKLNCG-----VRAMA------INLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNF  273 (454)
Q Consensus       210 G~~~~~~~-----~~~~~~~~~~~~~-----~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  273 (454)
                      |.+++...     ..+.+.+..+...     +..++      .+++....++..++.+.+.+++.++|+++++...    
T Consensus       199 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----  274 (502)
T PLN02426        199 GLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF----  274 (502)
T ss_pred             CCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence            99864321     2233333322111     00001      1122222356677788999999999998876421    


Q ss_pred             CCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCC
Q 012872          274 PKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGL  353 (454)
Q Consensus       274 ~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  353 (454)
                      +...|+++.+++..      .+++++.+++.++++||+|||+++++|++|+|++||++|+++|+|++++.+..   ...+
T Consensus       275 ~~~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~---~~~~  345 (502)
T PLN02426        275 SASKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN---QEAA  345 (502)
T ss_pred             CCcchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC---CCCC
Confidence            13469999999753      36889999999999999999999999999999999999999999999987542   1228


Q ss_pred             CHHHhhcCccHHHHHHhhhcCcCCCcccccccCcccee-cCEEeCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCCCC
Q 012872          354 TLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNI-SGYTIPKGWKVLVWFRSVHLDPEIY-PNPKEFNPSRWDVSC  431 (454)
Q Consensus       354 ~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~  431 (454)
                      +++++++||||+|||+|+||++||++...|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++++
T Consensus       346 t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~  425 (502)
T PLN02426        346 SFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNG  425 (502)
T ss_pred             CHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCC
Confidence            99999999999999999999999999888999999888 8999999999999999999999999 999999999999744


Q ss_pred             Ceeee---ccccccccccce
Q 012872          432 RFVYL---NNLNMLVNAYAC  448 (454)
Q Consensus       432 ~~~~~---~~~~f~~g~~~c  448 (454)
                      +....   ...+||.|+|.|
T Consensus       426 ~~~~~~~~~~~pFg~G~R~C  445 (502)
T PLN02426        426 VFVPENPFKYPVFQAGLRVC  445 (502)
T ss_pred             CcCCCCCcccCCCCCCCCCC
Confidence            32111   234566666666


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=4.8e-55  Score=412.21  Aligned_cols=362  Identities=19%  Similarity=0.237  Sum_probs=272.4

Q ss_pred             CCcccCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccCCcE-------EEEeChHHHhhhhcC-
Q 012872           49 EKQYSLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFGNPS-------IIVTTPETCKRVLTD-  120 (454)
Q Consensus        49 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~~~~-------vvi~~~~~~~~i~~~-  120 (454)
                      ..+.+.|||+.+||++|...++++.....++..++.+.++|||++ ||+++++|.+.       +++++|+.++.++.+ 
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~-vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~   91 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKST-VFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVS   91 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCc-eEEecCCCCCCCCCCCCEEEEEcCCceeeeecch
Confidence            446677999999999999998876555678889999999999966 99999998655       999999999999984 


Q ss_pred             ----CCccCCCCchhHHhhhcCc---cccccCcHHHHHHHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhc----CCCc
Q 012872          121 ----DDAFKPGWPASTMELIGKK---SFIGISYEEHKRLRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWS----NLER  189 (454)
Q Consensus       121 ----~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~  189 (454)
                          ...+...++.... ++|+.   +++..+|+.|+++|+++.+ .|+ ..++.+.+.+++.++++++.|.    ++++
T Consensus        92 ~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~-~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         92 KVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFE-LLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             hccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHH-HHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence                3335555554444 78866   7788899999999999999 888 5778899999999999999994    3457


Q ss_pred             eeHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhhhhhhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 012872          190 IEFLTQLRRLTFRIIMYIFLSSESDHVLEALEREYTKLNCGVRAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSK  269 (454)
Q Consensus       190 vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (454)
                      +|+.+.+.++++++++.++||.+.+.  +.+.+.+..+...+.... .+|..        ...+...+++.+.++.....
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~-~~p~~--------~~~l~~~~~~~i~~~~~~~~  237 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQ-LAPLA--------STGLPHVLEELLLHTFPLPF  237 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHH-hhHHH--------HcCchHHHHHHhhcccCCch
Confidence            99999999999999999999997655  223333332222211100 00100        00011111111111100000


Q ss_pred             CCCCCCcCcHH-------HHhhcchhhcCCCCCHHHHHHHHHH-HHHhccchHHHHHHHHHHHHhhChH-HHHHHHHHHH
Q 012872          270 DDNFPKKKDMM-------DALLSVEDENGRKLEDEEIIDVLLM-YLNAGHESSGHTMMWATIFLQEHPE-FLQKAKAEQE  340 (454)
Q Consensus       270 ~~~~~~~~~~l-------~~ll~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~-~~~~lr~Ei~  340 (454)
                      ........+++       +.+++..++.  +++++|+.++++. +.+++++|++.+++|++|+|++||+ +|+++++|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~  315 (480)
T PLN02648        238 FLVKSDYDKLYDFFRASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVR  315 (480)
T ss_pred             hhhhccHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            00000011122       2444433332  4999999999876 4467788888999999999999995 9999999999


Q ss_pred             HHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCccceec----CEEeCCCCEEEEeccccccCCCCC
Q 012872          341 MIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNIS----GYTIPKGWKVLVWFRSVHLDPEIY  416 (454)
Q Consensus       341 ~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~----g~~ip~G~~v~~~~~~~~~d~~~~  416 (454)
                      ++.+..  +.. ++.+++.+||||++||+|+||++|+++...|.+.+|++++    ||.||||+.|+++.+.+||||++|
T Consensus       316 ~~~~~~--~~~-~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~  392 (480)
T PLN02648        316 SAVKAG--GGG-VTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF  392 (480)
T ss_pred             HHhccC--CCC-CCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC
Confidence            998531  122 8999999999999999999999999998889999999996    799999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 012872          417 PNPKEFNPSRWDVS  430 (454)
Q Consensus       417 ~dp~~F~P~Rfl~~  430 (454)
                      |||++|+|+||+++
T Consensus       393 ~dP~~F~PeRf~~~  406 (480)
T PLN02648        393 DRPEEFVPDRFMGE  406 (480)
T ss_pred             CCcceeCCCCCCCC
Confidence            99999999999964


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.7e-49  Score=367.43  Aligned_cols=316  Identities=31%  Similarity=0.465  Sum_probs=265.5

Q ss_pred             chHHHHHHHHHhCCCCeEEEeccCCc--EEEEeChHHHhhhhcCCCccCCCCchh-----HHhhhcCccccccCcHHHHH
Q 012872           79 PDSFVDSFVSRFGRTGMYKAFMFGNP--SIIVTTPETCKRVLTDDDAFKPGWPAS-----TMELIGKKSFIGISYEEHKR  151 (454)
Q Consensus        79 ~~~~~~~~~~kyG~~~v~~~~~~~~~--~vvi~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~  151 (454)
                      +......+.+.||.  ++++...+..  .+++++++++++++.++..+.+.....     ....+|...++..||+.|.+
T Consensus        24 ~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGD--YFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCch--hhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHH
Confidence            45566778889998  8888776654  899999999999999965333332221     24555655588999999999


Q ss_pred             HHhhhcCCCCChhHHHHhHHHHHHHHHHHHHhhcCCCceeHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhhhh
Q 012872          152 LRRLTAAPVNGHEALSVYVHYIEDIVTSALDKWSNLERIEFLTQLRRLTFRIIMYIFLSSESDHVLEALEREYTKLNCGV  231 (454)
Q Consensus       152 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~  231 (454)
                      +||++++ .|+++.++.+.+.+.+.++++++.+..++.+++.+....+++++++ .+||.+.++...........+.. .
T Consensus       102 ~Rkl~~~-~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~  178 (411)
T COG2124         102 LRKLLAP-AFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-L  178 (411)
T ss_pred             HHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-c
Confidence            9999999 9999999999999999999999998433577888889999999999 89999877654333322222222 1


Q ss_pred             hhhhhccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcchhhcCCCCCHHHHHHHHHHHHHhcc
Q 012872          232 RAMAINLPGFAYHKALKARKNLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVEDENGRKLEDEEIIDVLLMYLNAGH  311 (454)
Q Consensus       232 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~  311 (454)
                      .  +...+.....+..++.+.+.+++.++|++++..       +..|+++.++...++++..+|++|+.++++++++||+
T Consensus       179 ~--~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~-------~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGh  249 (411)
T COG2124         179 D--PDLGPEEPWRRARAARRELDAYLRALIAERRAA-------PRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGH  249 (411)
T ss_pred             C--cccCCcccHHHHHHHHHHHHHHHHHHHHHhccC-------CcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhh
Confidence            1  233333446778899999999999999999944       5679999999988776557999999999999999999


Q ss_pred             chHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCccHHHHHHhhhcCcCCCcccccccCcccee
Q 012872          312 ESSGHTMMWATIFLQEHPEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDYLSKVVDETLRIITFSLTVFREAKTDVNI  391 (454)
Q Consensus       312 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i  391 (454)
                      |||+++|+|++|.|++||++++++++|.+.                    ||+.++++|+||++||++...|.+.+|+++
T Consensus       250 eTTa~~l~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~i  309 (411)
T COG2124         250 ETTANALAWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVEL  309 (411)
T ss_pred             HHHHHHHHHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEee
Confidence            999999999999999999999999998543                    688999999999999999988999999999


Q ss_pred             cCEEeCCCCEEEEeccccccCCCCCCCCCCCCCCCCC
Q 012872          392 SGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWD  428 (454)
Q Consensus       392 ~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl  428 (454)
                      +|+.||||+.|+++++++||||++|+||++|||+||.
T Consensus       310 gg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~  346 (411)
T COG2124         310 GGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN  346 (411)
T ss_pred             CCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC
Confidence            9999999999999999999999999999999999999


No 33 
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=70.86  E-value=3.1  Score=40.12  Aligned_cols=15  Identities=27%  Similarity=0.722  Sum_probs=8.6

Q ss_pred             cCCCCCCCCCCCCCCC
Q 012872          411 LDPEIYPNPKEFNPSR  426 (454)
Q Consensus       411 ~d~~~~~dp~~F~P~R  426 (454)
                      -||+.| +|+.|.+++
T Consensus       410 p~Pe~F-~PERF~~~~  424 (499)
T KOG0158|consen  410 PEPEKF-KPERFEEEN  424 (499)
T ss_pred             CCcccC-CCccCCCCc
Confidence            456665 456665554


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.26  E-value=1.9  Score=35.74  Aligned_cols=44  Identities=30%  Similarity=0.317  Sum_probs=31.9

Q ss_pred             cCccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEE
Q 012872          360 EMDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLV  404 (454)
Q Consensus       360 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~  404 (454)
                      .-..+.|||.|++-...- ..+-=...+|+.++|..|||||.++-
T Consensus        51 ~~n~I~A~V~~~qtv~~G-s~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDG-SRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCC-CEEEEEEcCceEECCEEeCCCCEEEE
Confidence            345678999999876433 12222446899999999999998875


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=56.67  E-value=12  Score=23.73  Aligned_cols=23  Identities=26%  Similarity=0.394  Sum_probs=18.5

Q ss_pred             HHHHHHhhChHHHHHHHHHHHHH
Q 012872          320 WATIFLQEHPEFLQKAKAEQEMI  342 (454)
Q Consensus       320 ~~l~~L~~~p~~~~~lr~Ei~~~  342 (454)
                      -++.||..||++.+++.+.=..+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            46789999999999998864444


No 36 
>PF15050 SCIMP:  SCIMP protein
Probab=55.63  E-value=46  Score=24.66  Aligned_cols=18  Identities=28%  Similarity=0.301  Sum_probs=11.5

Q ss_pred             CcccCCCcCc-CCccccch
Q 012872           50 KQYSLPPGDM-GWPFIGNM   67 (454)
Q Consensus        50 ~~~~~ppgp~-~~P~~G~~   67 (454)
                      .+.++||.|+ +.|..|+.
T Consensus        65 ~~~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   65 SPVQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             CcCCCCCCCCCCCCCcccc
Confidence            4567777654 56777754


No 37 
>PF15176 LRR19-TM:  Leucine-rich repeat family 19 TM domain
Probab=54.95  E-value=42  Score=24.11  Aligned_cols=28  Identities=25%  Similarity=0.347  Sum_probs=15.5

Q ss_pred             CchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 012872           10 SWSWIWGVGVVGSMIGGSMMILKWVMKRV   38 (454)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   38 (454)
                      ...|.+.+++++.++.+ .+++++.++..
T Consensus        14 g~sW~~LVGVv~~al~~-SlLIalaaKC~   41 (102)
T PF15176_consen   14 GRSWPFLVGVVVTALVT-SLLIALAAKCP   41 (102)
T ss_pred             CcccHhHHHHHHHHHHH-HHHHHHHHHhH
Confidence            35677777777666666 33333333333


No 38 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=54.59  E-value=48  Score=20.26  Aligned_cols=42  Identities=17%  Similarity=0.159  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHH
Q 012872          298 EIIDVLLMYLNAGHESSGHTMMWATIFLQEHPEFLQKAKAEQ  339 (454)
Q Consensus       298 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  339 (454)
                      ++..++..++-.|.|..+-.++--+.+..-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            566677778888888888888888999999999888887775


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=48.45  E-value=24  Score=23.92  Aligned_cols=39  Identities=18%  Similarity=0.168  Sum_probs=30.5

Q ss_pred             HHHhhhcCcCCCc-ccccccCcccee--cCEEeCCCCEEEEe
Q 012872          367 VVDETLRIITFSL-TVFREAKTDVNI--SGYTIPKGWKVLVW  405 (454)
Q Consensus       367 ~i~E~lRl~p~~~-~~~R~~~~d~~i--~g~~ip~G~~v~~~  405 (454)
                      -++|.+.+.+-.. .+-|.+.+++.+  +|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3788899987754 356888776555  99999999999875


No 40 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=44.61  E-value=6.1  Score=36.79  Aligned_cols=44  Identities=18%  Similarity=0.133  Sum_probs=32.1

Q ss_pred             CccHHHHHHhhhcCcCCCcccccccCccceecCEEeCCCCEEEEe
Q 012872          361 MDYLSKVVDETLRIITFSLTVFREAKTDVNISGYTIPKGWKVLVW  405 (454)
Q Consensus       361 l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~  405 (454)
                      -..+.|||.|++-+.-- ..+-=...+|+.++|..|||||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G-~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDG-SAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecC-CEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            44578999999877533 122224468999999999999988754


No 41 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=44.60  E-value=12  Score=35.83  Aligned_cols=37  Identities=19%  Similarity=0.243  Sum_probs=23.5

Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          409 VHLDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       409 ~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      ...||+.| +|+.|..++-..  ........+||.|+|.|
T Consensus       376 ~~~dp~~F-~P~R~~~~~~~~--~~~~~~~~~Fg~G~r~C  412 (463)
T PF00067_consen  376 YFPDPDEF-DPERFLDERGIS--NRPSFAFLPFGAGPRMC  412 (463)
T ss_dssp             TSSSTTS---TTGGBTTTSTB--CSSSTTSSTTESSTTS-
T ss_pred             cccccccc-cccccccccccc--ccccccccccccccccc
Confidence            34788888 688888888621  11223456799999999


No 42 
>PRK00523 hypothetical protein; Provisional
Probab=43.79  E-value=78  Score=21.23  Aligned_cols=26  Identities=19%  Similarity=-0.101  Sum_probs=13.1

Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHHh
Q 012872           11 WSWIWGVGVVGSMIGGSMMILKWVMKR   37 (454)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   37 (454)
                      +.++|.+..+++++++ +++-+++.++
T Consensus         3 ~~~l~I~l~i~~li~G-~~~Gffiark   28 (72)
T PRK00523          3 AIGLALGLGIPLLIVG-GIIGYFVSKK   28 (72)
T ss_pred             hHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            4455655555555555 4444444333


No 43 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=43.10  E-value=16  Score=35.76  Aligned_cols=36  Identities=0%  Similarity=-0.099  Sum_probs=18.6

Q ss_pred             CCCCCC--CCCCCCCCCCeeee--c----cccccccccceeeee
Q 012872          417 PNPKEF--NPSRWDVSCRFVYL--N----NLNMLVNAYACHISI  452 (454)
Q Consensus       417 ~dp~~F--~P~Rfl~~~~~~~~--~----~~~f~~g~~~ch~~~  452 (454)
                      -||+.|  ||+.|-++.=....  .    ...|..||.|.|.||
T Consensus       405 rd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~Ci  448 (500)
T PLN02169        405 RMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCL  448 (500)
T ss_pred             CCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCc
Confidence            466666  66666544321111  1    234666677766665


No 44 
>PRK01844 hypothetical protein; Provisional
Probab=41.04  E-value=96  Score=20.81  Aligned_cols=26  Identities=12%  Similarity=0.289  Sum_probs=13.1

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 012872           12 SWIWGVGVVGSMIGGSMMILKWVMKRV   38 (454)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   38 (454)
                      .|+|.+..+++++++ +++-+++.++.
T Consensus         3 ~~~~I~l~I~~li~G-~~~Gff~ark~   28 (72)
T PRK01844          3 IWLGILVGVVALVAG-VALGFFIARKY   28 (72)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            455555555555555 44444444433


No 45 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.83  E-value=1.1e+02  Score=20.45  Aligned_cols=25  Identities=12%  Similarity=0.329  Sum_probs=12.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHh
Q 012872           12 SWIWGVGVVGSMIGGSMMILKWVMKR   37 (454)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~   37 (454)
                      .|++.+..++++++. +++-+++.++
T Consensus         3 l~lail~ivl~ll~G-~~~G~fiark   27 (71)
T COG3763           3 LWLAILLIVLALLAG-LIGGFFIARK   27 (71)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            355555555555555 4444444443


No 46 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.72  E-value=19  Score=33.97  Aligned_cols=41  Identities=17%  Similarity=0.211  Sum_probs=25.7

Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCeeee--ccccccccccce
Q 012872          407 RSVHLDPEIYPNPKEFNPSRWDVSCRFVYL--NNLNMLVNAYAC  448 (454)
Q Consensus       407 ~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~--~~~~f~~g~~~c  448 (454)
                      -..+-||+.| +|++|..+|=-++......  ..++||+|.|.|
T Consensus       389 peif~dp~~F-k~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~C  431 (486)
T KOG0684|consen  389 PEIFPDPEDF-KPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRC  431 (486)
T ss_pred             ccccCChhhC-ChhhccCCCcccccccccccccccccCCCcCCC
Confidence            3457888888 6899998886653222222  235666666666


No 47 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=38.68  E-value=19  Score=35.33  Aligned_cols=37  Identities=16%  Similarity=0.195  Sum_probs=16.6

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          411 LDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       411 ~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      .||+.| ||+.|-.++=-...+.......+||.|+|.|
T Consensus       405 ~~P~~F-~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C  441 (499)
T PLN03234        405 DNPNEF-IPERFMKEHKGVDFKGQDFELLPFGSGRRMC  441 (499)
T ss_pred             CChhhc-CchhhcCCCCCcCcCCCcceEeCCCCCCCCC
Confidence            567777 5566654321100000111234566666666


No 48 
>COG3952 Predicted membrane protein [Function unknown]
Probab=36.59  E-value=96  Score=22.51  Aligned_cols=76  Identities=14%  Similarity=0.140  Sum_probs=36.6

Q ss_pred             CcccccCCCCchhhh-hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCCcccCCCcCcC-CccccchHHHHHHhhcCC
Q 012872            1 MEWMMNSDSSWSWIW-GVGVVGSMIGGSMMILKWVMKRVNWWLYERKLGEKQYSLPPGDMG-WPFIGNMWSFLRAFKTTH   78 (454)
Q Consensus         1 ~~~m~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~-~P~~G~~~~~~~~~~~~~   78 (454)
                      |.||++.+  +..+. .-+...+.+++++-..+.-.+...-|....+.+   .+..|.+.. ..++|.+..+...++.+|
T Consensus         6 n~~~a~~~--~lh~~~~~~~l~W~LiG~~g~~lFt~Rf~VQw~~se~a~---rsv~P~~FW~~sllGg~l~L~Yfi~~~D   80 (113)
T COG3952           6 NGLMALPN--WLHLNLPKAFLSWKLIGFSGQLLFTGRFVVQWLASEHAN---RSVIPVLFWYFSLLGGLLLLSYFIRRQD   80 (113)
T ss_pred             hhhhhcch--hhcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcchHHHHHHHHHhhHHHHHHHHHhcc
Confidence            55777544  22111 112234444442333333344444455555533   344455543 256787777666666666


Q ss_pred             chH
Q 012872           79 PDS   81 (454)
Q Consensus        79 ~~~   81 (454)
                      +..
T Consensus        81 pV~   83 (113)
T COG3952          81 PVF   83 (113)
T ss_pred             hHH
Confidence            643


No 49 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=36.35  E-value=55  Score=25.70  Aligned_cols=40  Identities=23%  Similarity=0.387  Sum_probs=27.1

Q ss_pred             CccceecCEEeCCCCEEEEeccc-------cccCCCCCCCCCCCCCCC
Q 012872          386 KTDVNISGYTIPKGWKVLVWFRS-------VHLDPEIYPNPKEFNPSR  426 (454)
Q Consensus       386 ~~d~~i~g~~ip~G~~v~~~~~~-------~~~d~~~~~dp~~F~P~R  426 (454)
                      .+|+.|+|..||+|+.-+...-.       +|.+.+.|-. ..++|+.
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            47899999999999876654332       4666666743 4555543


No 50 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=36.29  E-value=96  Score=22.89  Aligned_cols=11  Identities=27%  Similarity=0.160  Sum_probs=7.0

Q ss_pred             CCccccchHHH
Q 012872           60 GWPFIGNMWSF   70 (454)
Q Consensus        60 ~~P~~G~~~~~   70 (454)
                      .-|..||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            35778886543


No 51 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=36.08  E-value=22  Score=22.06  Aligned_cols=13  Identities=8%  Similarity=0.268  Sum_probs=11.4

Q ss_pred             ccccccccceeee
Q 012872          439 LNMLVNAYACHIS  451 (454)
Q Consensus       439 ~~f~~g~~~ch~~  451 (454)
                      ..||.|.|.|+.|
T Consensus        12 ~kfg~GsrsC~vC   24 (56)
T KOG3506|consen   12 RKFGQGSRSCRVC   24 (56)
T ss_pred             cccCCCCcceeee
Confidence            4599999999987


No 52 
>PF08114 PMP1_2:  ATPase proteolipid family;  InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=36.06  E-value=47  Score=19.22  Aligned_cols=8  Identities=13%  Similarity=0.543  Sum_probs=3.9

Q ss_pred             hhHHHHHh
Q 012872           39 NWWLYERK   46 (454)
Q Consensus        39 ~~~~~~~~   46 (454)
                      ++|..+++
T Consensus        31 RKw~aRkr   38 (43)
T PF08114_consen   31 RKWQARKR   38 (43)
T ss_pred             HHHHHHHH
Confidence            45555544


No 53 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=34.51  E-value=27  Score=34.19  Aligned_cols=6  Identities=33%  Similarity=0.866  Sum_probs=2.9

Q ss_pred             cCCCCC
Q 012872          411 LDPEIY  416 (454)
Q Consensus       411 ~d~~~~  416 (454)
                      -||+.|
T Consensus       414 F~PeRw  419 (503)
T PLN02394        414 FRPERF  419 (503)
T ss_pred             cCcccc
Confidence            344445


No 54 
>PLN02500 cytochrome P450 90B1
Probab=34.31  E-value=25  Score=34.31  Aligned_cols=16  Identities=19%  Similarity=0.532  Sum_probs=10.3

Q ss_pred             ccCCCCCCCCCCCCCCC
Q 012872          410 HLDPEIYPNPKEFNPSR  426 (454)
Q Consensus       410 ~~d~~~~~dp~~F~P~R  426 (454)
                      .-||+.| +|+.|.+++
T Consensus       398 ~~dP~~F-~PeRfl~~~  413 (490)
T PLN02500        398 YDQPQLF-NPWRWQQNN  413 (490)
T ss_pred             CCCcccc-ChhhccCCC
Confidence            3577777 577776543


No 55 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=34.04  E-value=24  Score=34.60  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=20.2

Q ss_pred             CCCCCCCCCCCCCCCCC-CCCCeeeeccccccccccce
Q 012872          412 DPEIYPNPKEFNPSRWD-VSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       412 d~~~~~dp~~F~P~Rfl-~~~~~~~~~~~~f~~g~~~c  448 (454)
                      ||+.| ||+.|.++.=- ..+.++   ..+|++|+|.|
T Consensus       410 dp~~F-~PeRf~~~~~~~~~~~~~---fipFsaGpR~C  443 (497)
T KOG0157|consen  410 DPEEF-DPERFLDGEEKAKRHPFA---FIPFSAGPRNC  443 (497)
T ss_pred             Chhhc-CccccCCCCCcCCCCCcc---ccCCCCCcccc
Confidence            56555 66777643211 233333   45699999999


No 56 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=33.92  E-value=31  Score=33.90  Aligned_cols=11  Identities=36%  Similarity=0.887  Sum_probs=4.7

Q ss_pred             CCCCCCCCCCCC
Q 012872          412 DPEIYPNPKEFN  423 (454)
Q Consensus       412 d~~~~~dp~~F~  423 (454)
                      ||+.| +|+.|.
T Consensus       406 dP~~F-~PeRfl  416 (504)
T PLN00110        406 NPEEF-RPERFL  416 (504)
T ss_pred             CcccC-Cccccc
Confidence            44444 344443


No 57 
>PLN02936 epsilon-ring hydroxylase
Probab=33.02  E-value=30  Score=33.78  Aligned_cols=37  Identities=11%  Similarity=0.072  Sum_probs=16.9

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCeeeeccccccccccce
Q 012872          411 LDPEIYPNPKEFNPSRWDVSCRFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       411 ~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~f~~g~~~c  448 (454)
                      -||+.| +|+.|.+++=............+||.|+|+|
T Consensus       393 ~dP~~F-~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C  429 (489)
T PLN02936        393 ERAEEF-VPERFDLDGPVPNETNTDFRYIPFSGGPRKC  429 (489)
T ss_pred             CCcccc-CccccCCCCCCccccCCCcceeCCCCCCCCC
Confidence            366666 4566654432111111111335566666666


No 58 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=32.06  E-value=33  Score=25.93  Aligned_cols=32  Identities=38%  Similarity=0.377  Sum_probs=22.7

Q ss_pred             cccCccceecCEEeCCCCEEEEeccccccCCCCCC
Q 012872          383 REAKTDVNISGYTIPKGWKVLVWFRSVHLDPEIYP  417 (454)
Q Consensus       383 R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~  417 (454)
                      -++.+|+.++|..||+|+.|+.--   -.|+++|+
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~~k---~~ddelWe  102 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVGVK---ITDDELWE  102 (122)
T ss_pred             EecCCCcccCCeeecceEEEEEEE---ecCHHHHH
Confidence            455679999999999999986422   13456663


No 59 
>PLN02290 cytokinin trans-hydroxylase
Probab=31.86  E-value=19  Score=35.43  Aligned_cols=36  Identities=6%  Similarity=0.002  Sum_probs=20.8

Q ss_pred             CCCCCC--CCCCCCCCCCee--eeccccccccccceeeee
Q 012872          417 PNPKEF--NPSRWDVSCRFV--YLNNLNMLVNAYACHISI  452 (454)
Q Consensus       417 ~dp~~F--~P~Rfl~~~~~~--~~~~~~f~~g~~~ch~~~  452 (454)
                      -||+.|  ||+.|..+.-..  ......|..||.|.|.|+
T Consensus       424 rdp~~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~  463 (516)
T PLN02290        424 HSEELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCI  463 (516)
T ss_pred             CChhhhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCc
Confidence            366666  677766543211  112345777777777775


No 60 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=31.74  E-value=2.3e+02  Score=21.48  Aligned_cols=92  Identities=15%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcch--------hhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHH--
Q 012872          252 NLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVE--------DENGRKLEDEEIIDVLLMYLNAGHESSGHTMMWA--  321 (454)
Q Consensus       252 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~--------~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~--  321 (454)
                      ...+-+..+++++++.-....+..-.+..+.|++..        +..+.+++.++.-..++.-+.....+++..|.-.  
T Consensus        11 ~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~l   90 (127)
T PF05261_consen   11 KVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSSL   90 (127)
T ss_dssp             CHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            455667778888877643332222234555555431        1135578888888888888887777777766543  


Q ss_pred             HHHHhhChH---------HHHHHHHHHHHHH
Q 012872          322 TIFLQEHPE---------FLQKAKAEQEMIV  343 (454)
Q Consensus       322 l~~L~~~p~---------~~~~lr~Ei~~~~  343 (454)
                      .-++..+|.         +.+++++++...+
T Consensus        91 s~~v~~~~~~ey~~m~~~I~~~v~e~m~~FF  121 (127)
T PF05261_consen   91 SPEVKGNPKFEYENMVEKIREKVSEEMERFF  121 (127)
T ss_dssp             SHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS
T ss_pred             cHhhccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence            455555543         3444555555544


No 61 
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and   subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=30.82  E-value=96  Score=21.51  Aligned_cols=30  Identities=7%  Similarity=0.139  Sum_probs=25.8

Q ss_pred             HHHHHHHHhhChHHHHHHHHHHHHHHhcCC
Q 012872          318 MMWATIFLQEHPEFLQKAKAEQEMIVKKRP  347 (454)
Q Consensus       318 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  347 (454)
                      +.=++..|.++|++.++.+++-++++...+
T Consensus         6 ~nrli~~L~~dp~~rerF~~DPea~~~~~g   35 (81)
T cd07922           6 VNRLIQELFKDPGLIERFQDDPSAVFEEYG   35 (81)
T ss_pred             HHHHHHHHhcCHHHHHHHHHCHHHHHHHcC
Confidence            455678899999999999999999987766


No 62 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=30.26  E-value=1e+02  Score=21.64  Aligned_cols=19  Identities=21%  Similarity=0.518  Sum_probs=16.1

Q ss_pred             ChHHHHHHHHHHHHHHhcC
Q 012872          328 HPEFLQKAKAEQEMIVKKR  346 (454)
Q Consensus       328 ~p~~~~~lr~Ei~~~~~~~  346 (454)
                      .|+..+.+|+||-+++..+
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            3899999999999998654


No 63 
>PLN00168 Cytochrome P450; Provisional
Probab=29.64  E-value=36  Score=33.52  Aligned_cols=14  Identities=21%  Similarity=0.396  Sum_probs=9.3

Q ss_pred             cCCCCCCCCCCCCCC
Q 012872          411 LDPEIYPNPKEFNPS  425 (454)
Q Consensus       411 ~d~~~~~dp~~F~P~  425 (454)
                      -||+.| +|+.|.++
T Consensus       423 ~~p~~F-~PeRf~~~  436 (519)
T PLN00168        423 ERPMEF-VPERFLAG  436 (519)
T ss_pred             CCcccc-CcccCCCC
Confidence            467777 56777664


No 64 
>cd03742 SOCS_Rab40 SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as membrane-associated molecular switches. Rab40 is characterized by a SOCS box c-terminal to the GTPase domain. The SOCS boxes interact with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.
Probab=29.40  E-value=1e+02  Score=18.31  Aligned_cols=25  Identities=4%  Similarity=-0.122  Sum_probs=16.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCCCCCCHHHhhcCcc
Q 012872          329 PEFLQKAKAEQEMIVKKRPPTQKGLTLKEIREMDY  363 (454)
Q Consensus       329 p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l~~  363 (454)
                      +.+|+-.|..|...          .+.+.++++|+
T Consensus         4 ~SLQ~LCR~~I~~~----------t~~~~I~~LPL   28 (43)
T cd03742           4 LSLQDLCCRAIVSC----------TPVYLIDKLPL   28 (43)
T ss_pred             ccHHHHHHHHHHHh----------CCcchhhhCCC
Confidence            56788888888776          34455666663


No 65 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.01  E-value=93  Score=17.89  Aligned_cols=20  Identities=25%  Similarity=0.281  Sum_probs=13.4

Q ss_pred             HHHHHHHHh-hChHHHHHHHH
Q 012872          318 MMWATIFLQ-EHPEFLQKAKA  337 (454)
Q Consensus       318 l~~~l~~L~-~~p~~~~~lr~  337 (454)
                      |..++..++ +||++++.++.
T Consensus        15 L~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   15 LQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHhChhHHHHHHh
Confidence            444444454 89999888765


No 66 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=28.67  E-value=37  Score=33.42  Aligned_cols=37  Identities=16%  Similarity=0.120  Sum_probs=18.0

Q ss_pred             cCCCCCCCCCCCCCCCCCCCC--Ceeeeccccccccccce
Q 012872          411 LDPEIYPNPKEFNPSRWDVSC--RFVYLNNLNMLVNAYAC  448 (454)
Q Consensus       411 ~d~~~~~dp~~F~P~Rfl~~~--~~~~~~~~~f~~g~~~c  448 (454)
                      -||+.| ||+.|.++.=-...  .......++||.|+|.|
T Consensus       412 ~dP~~F-~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C  450 (514)
T PLN03112        412 DDVEEF-RPERHWPAEGSRVEISHGPDFKILPFSAGKRKC  450 (514)
T ss_pred             CChhhc-CCcccCCCCCCccccccCCCcceeCCCCCCCCC
Confidence            477777 56776553210000  00111345577777777


No 67 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=28.58  E-value=1.6e+02  Score=18.63  Aligned_cols=19  Identities=26%  Similarity=0.510  Sum_probs=10.2

Q ss_pred             HhhhhHHHHHhhCCCcccCCCcCcC
Q 012872           36 KRVNWWLYERKLGEKQYSLPPGDMG   60 (454)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~ppgp~~   60 (454)
                      ..+..|.+.--      -.||||++
T Consensus        43 yGFiVWM~Qii------fGPPGpp~   61 (62)
T COG4459          43 YGFIVWMFQII------FGPPGPPG   61 (62)
T ss_pred             hhHHHHHHHHH------hCCCCCCC
Confidence            34445555443      56777753


No 68 
>PTZ00404 cytochrome P450; Provisional
Probab=27.88  E-value=32  Score=33.53  Aligned_cols=14  Identities=0%  Similarity=-0.140  Sum_probs=7.1

Q ss_pred             ccccccccceeeee
Q 012872          439 LNMLVNAYACHISI  452 (454)
Q Consensus       439 ~~f~~g~~~ch~~~  452 (454)
                      ..|..||.|.|.|+
T Consensus       417 ~~~~pFg~G~R~C~  430 (482)
T PTZ00404        417 DAFMPFSIGPRNCV  430 (482)
T ss_pred             CceeccCCCCCCCc
Confidence            34555555555553


No 69 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=27.49  E-value=52  Score=31.99  Aligned_cols=13  Identities=0%  Similarity=-0.304  Sum_probs=10.8

Q ss_pred             cccccccceeeee
Q 012872          440 NMLVNAYACHISI  452 (454)
Q Consensus       440 ~f~~g~~~ch~~~  452 (454)
                      .|..||.|.|.|+
T Consensus       407 ~~l~FG~G~r~C~  419 (472)
T PLN02987        407 VFTPFGGGPRLCP  419 (472)
T ss_pred             ceECCCCCCcCCC
Confidence            4788999999886


No 70 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=27.38  E-value=1.2e+02  Score=18.69  Aligned_cols=35  Identities=17%  Similarity=0.330  Sum_probs=23.9

Q ss_pred             HHHHHHhCCCCeEEEeccCC--c--EEEEeChHHHhhhhcC
Q 012872           84 DSFVSRFGRTGMYKAFMFGN--P--SIIVTTPETCKRVLTD  120 (454)
Q Consensus        84 ~~~~~kyG~~~v~~~~~~~~--~--~vvi~~~~~~~~i~~~  120 (454)
                      .+..++||+  |..+.+...  .  .|-..+++.++.+...
T Consensus         2 ~~~f~~fG~--V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGE--VKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS---EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCccc--EEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            467889999  999887542  3  3334688888877764


No 71 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=26.94  E-value=1.4e+02  Score=17.38  Aligned_cols=15  Identities=20%  Similarity=0.388  Sum_probs=10.8

Q ss_pred             hHHHHHHHHHHHHHH
Q 012872          329 PEFLQKAKAEQEMIV  343 (454)
Q Consensus       329 p~~~~~lr~Ei~~~~  343 (454)
                      .++++.+|.|++.+-
T Consensus        10 qEIL~EvrkEl~K~K   24 (40)
T PF08776_consen   10 QEILEEVRKELQKVK   24 (40)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            467778888877664


No 72 
>PLN02966 cytochrome P450 83A1
Probab=26.91  E-value=35  Score=33.49  Aligned_cols=36  Identities=11%  Similarity=0.162  Sum_probs=24.7

Q ss_pred             CCCCCC--CCCCCCCCCCeeee-c----cccccccccceeeee
Q 012872          417 PNPKEF--NPSRWDVSCRFVYL-N----NLNMLVNAYACHISI  452 (454)
Q Consensus       417 ~dp~~F--~P~Rfl~~~~~~~~-~----~~~f~~g~~~ch~~~  452 (454)
                      -||+.|  +|++|..+.-.... .    ...|..||.|.|.||
T Consensus       401 rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~  443 (502)
T PLN02966        401 RDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCP  443 (502)
T ss_pred             CCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCC
Confidence            578887  88888765432211 1    246889999999986


No 73 
>PF13967 RSN1_TM:  Late exocytosis, associated with Golgi transport 
Probab=26.54  E-value=2.3e+02  Score=22.52  Aligned_cols=31  Identities=6%  Similarity=0.126  Sum_probs=16.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 012872           15 WGVGVVGSMIGGSMMILKWVMKRVNWWLYERK   46 (454)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   46 (454)
                      .++.+.+++.++ .++++.++++.....+..+
T Consensus         4 ~sl~~~~~i~~~-~~~~F~~lR~~~~~iY~pR   34 (157)
T PF13967_consen    4 TSLAINLIIFLV-LLLLFCILRKRFPRIYQPR   34 (157)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhccHHhcccc
Confidence            344444444444 5666666666544444443


No 74 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=26.27  E-value=43  Score=28.06  Aligned_cols=20  Identities=30%  Similarity=0.594  Sum_probs=17.8

Q ss_pred             cccccCCCCCCCCCCCCCCC
Q 012872          407 RSVHLDPEIYPNPKEFNPSR  426 (454)
Q Consensus       407 ~~~~~d~~~~~dp~~F~P~R  426 (454)
                      +..+-|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            44589999999999999988


No 75 
>PLN02183 ferulate 5-hydroxylase
Probab=25.48  E-value=46  Score=32.77  Aligned_cols=12  Identities=0%  Similarity=-0.200  Sum_probs=6.4

Q ss_pred             ccccccceeeee
Q 012872          441 MLVNAYACHISI  452 (454)
Q Consensus       441 f~~g~~~ch~~~  452 (454)
                      |..||.|.|.||
T Consensus       444 ~lpFG~G~R~Ci  455 (516)
T PLN02183        444 FIPFGSGRRSCP  455 (516)
T ss_pred             ecCCCCCCCCCC
Confidence            455555555553


No 76 
>PRK05933 type III secretion system protein; Validated
Probab=24.98  E-value=82  Score=28.29  Aligned_cols=43  Identities=16%  Similarity=0.053  Sum_probs=32.2

Q ss_pred             HHHHHHhhhcCcCCCcc-ccccc-Ccc--ceecCEEeCCCCEEEEec
Q 012872          364 LSKVVDETLRIITFSLT-VFREA-KTD--VNISGYTIPKGWKVLVWF  406 (454)
Q Consensus       364 l~a~i~E~lRl~p~~~~-~~R~~-~~d--~~i~g~~ip~G~~v~~~~  406 (454)
                      ..--|+|.|+|.+.... +-|.+ .++  +.++|..|.+|.+|.++-
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd  363 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD  363 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence            45569999999887543 44665 454  555999999999998863


No 77 
>PRK11486 flagellar biosynthesis protein FliO; Provisional
Probab=24.49  E-value=1.7e+02  Score=22.34  Aligned_cols=25  Identities=4%  Similarity=-0.122  Sum_probs=14.1

Q ss_pred             eEEEeccCCcEEEEeChHHHhhhhc
Q 012872           95 MYKAFMFGNPSIIVTTPETCKRVLT  119 (454)
Q Consensus        95 v~~~~~~~~~~vvi~~~~~~~~i~~  119 (454)
                      ++-+.+++...++=..|..+..+..
T Consensus        68 vvvVeV~~~~LlLGVT~~~I~~Lh~   92 (124)
T PRK11486         68 VVIVDVEDARLVLGVTAGQINLLHK   92 (124)
T ss_pred             EEEEEECCEEEEEEEccCceeehhc
Confidence            5666665555555556666655543


No 78 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=23.82  E-value=2.1e+02  Score=20.94  Aligned_cols=59  Identities=12%  Similarity=0.138  Sum_probs=38.7

Q ss_pred             cCCCcCcCCccccchHHHHHHhhcCCchHHHHHHHHHhCCCCeEEEeccC------CcEEEEeChHHHhhhhcC
Q 012872           53 SLPPGDMGWPFIGNMWSFLRAFKTTHPDSFVDSFVSRFGRTGMYKAFMFG------NPSIIVTTPETCKRVLTD  120 (454)
Q Consensus        53 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~~~v~~~~~~~------~~~vvi~~~~~~~~i~~~  120 (454)
                      ..||-...+-++-|+.       .+=..+.+.++.-+||+  |..+++|.      .-+||-.|-.+++....+
T Consensus        12 rlppevnriLyirNLp-------~~ITseemydlFGkyg~--IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   12 RLPPEVNRILYIRNLP-------FKITSEEMYDLFGKYGT--IRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCChhhheeEEEecCC-------ccccHHHHHHHhhcccc--eEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            4444444444444443       12334567779999999  99999864      346666778888888777


No 79 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=22.98  E-value=1.3e+02  Score=21.45  Aligned_cols=30  Identities=13%  Similarity=0.128  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHHHHh
Q 012872          315 GHTMMWATIFLQEHPEFLQKAKAEQEMIVK  344 (454)
Q Consensus       315 ~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  344 (454)
                      ..++.|-+.-.-..||-.+.+++||+++-.
T Consensus        53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK~   82 (91)
T PF08285_consen   53 LFTLGYGVATFNDCPEAAKELQKEIKEAKA   82 (91)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence            446777777777889999999999998864


No 80 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=22.44  E-value=42  Score=22.05  Aligned_cols=15  Identities=13%  Similarity=0.412  Sum_probs=12.2

Q ss_pred             CccHHHHHHhhhcCc
Q 012872          361 MDYLSKVVDETLRII  375 (454)
Q Consensus       361 l~~l~a~i~E~lRl~  375 (454)
                      ..+++.+|+|++|+-
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            346899999999973


No 81 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=22.39  E-value=3.4e+02  Score=20.34  Aligned_cols=79  Identities=11%  Similarity=0.227  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCcCcHHHHhhcch--------hhcCCCCCHHHHHHHHHHHHHhccchHHHHHH--HH
Q 012872          252 NLVATLQSVVDDRRNRSKDDNFPKKKDMMDALLSVE--------DENGRKLEDEEIIDVLLMYLNAGHESSGHTMM--WA  321 (454)
Q Consensus       252 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ll~~~--------~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~--~~  321 (454)
                      ...+-+.++++++++.-...++-.-.+..+.|++..        +..+.+.+..+.-..++..+.-...+++..|.  ..
T Consensus         4 ~v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL~~~~l   83 (118)
T PRK13713          4 EVYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKILGIESL   83 (118)
T ss_pred             HHHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            455667778888887643332222223444444321        11344688888887888777777777766553  44


Q ss_pred             HHHHhhChH
Q 012872          322 TIFLQEHPE  330 (454)
Q Consensus       322 l~~L~~~p~  330 (454)
                      .-++..+|.
T Consensus        84 sp~v~~~~~   92 (118)
T PRK13713         84 SPHVSGNPK   92 (118)
T ss_pred             cHhhcCCCc
Confidence            566777765


No 82 
>PF07406 NICE-3:  NICE-3 protein;  InterPro: IPR010876 This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC), which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis []. The function of NICE-3 is unknown.
Probab=21.79  E-value=93  Score=25.69  Aligned_cols=34  Identities=24%  Similarity=0.466  Sum_probs=13.6

Q ss_pred             CchhhhhhHHHHHHHHHH-HHHHHHHHHhhhhHHH
Q 012872           10 SWSWIWGVGVVGSMIGGS-MMILKWVMKRVNWWLY   43 (454)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   43 (454)
                      ++.|+..+.++.+++.++ ++++++++.++..++.
T Consensus         4 ~~~~lsGv~vvlv~a~g~l~~vllfIfaKRQI~Rf   38 (186)
T PF07406_consen    4 NSEWLSGVNVVLVIAYGSLVFVLLFIFAKRQIMRF   38 (186)
T ss_pred             ccccccceeeehhhHHHHHHHHHHHHHHHHHHHHH
Confidence            344444554444433331 2333333444443333


No 83 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=21.66  E-value=60  Score=31.89  Aligned_cols=36  Identities=3%  Similarity=-0.122  Sum_probs=23.9

Q ss_pred             CCCCCC--CCCCCCCCCCeeeec--cc---cccccccceeeee
Q 012872          417 PNPKEF--NPSRWDVSCRFVYLN--NL---NMLVNAYACHISI  452 (454)
Q Consensus       417 ~dp~~F--~P~Rfl~~~~~~~~~--~~---~f~~g~~~ch~~~  452 (454)
                      -||+.|  ||+.|..+.-.....  ..   .|..||.|.|.||
T Consensus       404 rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~Ci  446 (502)
T PLN02426        404 RMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCL  446 (502)
T ss_pred             CCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCc
Confidence            578888  788887654322111  12   3788999999996


No 84 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=21.14  E-value=68  Score=31.57  Aligned_cols=9  Identities=22%  Similarity=0.158  Sum_probs=3.7

Q ss_pred             HHHHHHHHH
Q 012872          332 LQKAKAEQE  340 (454)
Q Consensus       332 ~~~lr~Ei~  340 (454)
                      .+.+-+|.-
T Consensus       374 l~Avi~EtL  382 (516)
T PLN03195        374 LHAVITETL  382 (516)
T ss_pred             HHHHHHHHh
Confidence            334444433


No 85 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=20.59  E-value=1.5e+02  Score=16.00  Aligned_cols=15  Identities=20%  Similarity=0.355  Sum_probs=11.1

Q ss_pred             ChHHHHHHHHHHHHH
Q 012872          328 HPEFLQKAKAEQEMI  342 (454)
Q Consensus       328 ~p~~~~~lr~Ei~~~  342 (454)
                      .|.+-.++|+|+++.
T Consensus        15 sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   15 SPRLARLIRKEIERL   29 (30)
T ss_dssp             -HHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHh
Confidence            477788889888764


No 86 
>PLN02687 flavonoid 3'-monooxygenase
Probab=20.39  E-value=73  Score=31.38  Aligned_cols=12  Identities=8%  Similarity=0.036  Sum_probs=6.3

Q ss_pred             ccccccceeeee
Q 012872          441 MLVNAYACHISI  452 (454)
Q Consensus       441 f~~g~~~ch~~~  452 (454)
                      |..||.|.|.||
T Consensus       441 ~~pFG~G~r~C~  452 (517)
T PLN02687        441 LIPFGAGRRICA  452 (517)
T ss_pred             eCCCCCCCCCCC
Confidence            455555555553


No 87 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=20.25  E-value=68  Score=20.64  Aligned_cols=7  Identities=43%  Similarity=1.099  Sum_probs=5.8

Q ss_pred             CCCCCCC
Q 012872          423 NPSRWDV  429 (454)
Q Consensus       423 ~P~Rfl~  429 (454)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7889986


Done!