Your job contains 1 sequence.
>012874
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS
LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK
PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ
EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL
AAAIPHFIKENVQIIVLVSITIRNYSTLYTFIMT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012874
(454 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037950 - symbol:GBSS1 "granule bound starch s... 1497 1.7e-153 1
UNIPROTKB|Q42968 - symbol:WAXY "Granule-bound starch synt... 1351 5.1e-138 1
TAIR|locus:2102102 - symbol:SS2 "starch synthase 2" speci... 587 4.6e-57 1
TAIR|locus:2169749 - symbol:SS1 "starch synthase 1" speci... 557 7.0e-54 1
TIGR_CMR|BA_5120 - symbol:BA_5120 "glycogen synthase" spe... 329 4.4e-34 2
UNIPROTKB|Q9KRB6 - symbol:glgA "Glycogen synthase" specie... 331 6.5e-30 1
TIGR_CMR|VC_1726 - symbol:VC_1726 "glycogen synthase" spe... 331 6.5e-30 1
TIGR_CMR|GSU_1023 - symbol:GSU_1023 "glycogen synthase" s... 319 7.1e-28 1
TIGR_CMR|GSU_3257 - symbol:GSU_3257 "glycogen synthase" s... 308 6.0e-26 1
UNIPROTKB|P0A6U8 - symbol:glgA species:83333 "Escherichia... 291 1.1e-23 1
TAIR|locus:2141936 - symbol:SS4 "starch synthase 4" speci... 281 3.5e-21 2
UNIPROTKB|Q4KCP0 - symbol:glgA "Glycogen synthase" specie... 167 2.7e-09 1
UNIPROTKB|Q9XHN9 - symbol:Q9XHN9 "Granule bound starch sy... 96 0.00045 1
TIGR_CMR|SO_1499 - symbol:SO_1499 "glycogen synthase" spe... 118 0.00071 1
>TAIR|locus:2037950 [details] [associations]
symbol:GBSS1 "granule bound starch synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0009011 "starch synthase
activity" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009250 "glucan biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC006424 eggNOG:COG0297 HOGENOM:HOG000294940 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252 EMBL:AY094405
EMBL:AY123983 EMBL:AY149948 EMBL:AY088544 IPI:IPI00520957
PIR:F86453 RefSeq:NP_174566.1 UniGene:At.11953
ProteinModelPortal:Q9MAQ0 SMR:Q9MAQ0 IntAct:Q9MAQ0 STRING:Q9MAQ0
PaxDb:Q9MAQ0 PRIDE:Q9MAQ0 EnsemblPlants:AT1G32900.1 GeneID:840184
KEGG:ath:AT1G32900 TAIR:At1g32900 InParanoid:Q9MAQ0 KO:K13679
OMA:ERYPQNI PhylomeDB:Q9MAQ0 ProtClustDB:CLSN2682839
Genevestigator:Q9MAQ0 GermOnline:AT1G32900 GO:GO:0009568
GO:GO:0033840 Uniprot:Q9MAQ0
Length = 610
Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
Identities = 286/440 (65%), Positives = 345/440 (78%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 418 DILAAAIPHFIKENVQIIVL 437
DIL AI F+ NVQ+++L
Sbjct: 417 DILVEAISKFMGLNVQMVIL 436
>UNIPROTKB|Q42968 [details] [associations]
symbol:WAXY "Granule-bound starch synthase 1,
chloroplastic/amyloplastic" species:4538 "Oryza glaberrima"
[GO:0004373 "glycogen (starch) synthase activity" evidence=ISS]
[GO:0005982 "starch metabolic process" evidence=ISS] [GO:0009501
"amyloplast" evidence=ISS] InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 GO:GO:0005982
GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252
GO:GO:0033840 EMBL:D10472 ProteinModelPortal:Q42968
EnsemblPlants:ORGLA06G0020500.1 Gramene:Q42968 Uniprot:Q42968
Length = 609
Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
Identities = 254/390 (65%), Positives = 303/390 (77%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG 227
DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YG
Sbjct: 166 DHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 225
Query: 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 287
EDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +
Sbjct: 226 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSER 285
Query: 288 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 347
F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 286 FRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRL 345
Query: 348 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I F
Sbjct: 346 TGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAF 405
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVL 437
IGRLEEQKG D++AAAIP ++E+VQI++L
Sbjct: 406 IGRLEEQKGPDVMAAAIPELMQEDVQIVLL 435
>TAIR|locus:2102102 [details] [associations]
symbol:SS2 "starch synthase 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0009011 "starch synthase activity" evidence=IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC008261 GO:GO:0009501 eggNOG:COG0297 HOGENOM:HOG000294940
KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0010021
GO:GO:0019252 EMBL:AY054467 EMBL:BT002555 IPI:IPI00531533
RefSeq:NP_186767.1 UniGene:At.18317 ProteinModelPortal:Q9MAC8
SMR:Q9MAC8 IntAct:Q9MAC8 STRING:Q9MAC8 PaxDb:Q9MAC8 PRIDE:Q9MAC8
EnsemblPlants:AT3G01180.1 GeneID:820294 KEGG:ath:AT3G01180
TAIR:At3g01180 InParanoid:Q9MAC8 OMA:ECAPFSK PhylomeDB:Q9MAC8
ProtClustDB:CLSN2684979 Genevestigator:Q9MAC8 Uniprot:Q9MAC8
Length = 792
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 141/359 (39%), Positives = 193/359 (53%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V +FH GVD VF+D P F + IYG G D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR-----HLSNNIYG---GNRL-DILKRMVLFC 411
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
+AA+E P + Y G ++ F+ANDWHT+L+P YLK Y+ G+ K + V
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLV 467
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IHNIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTVS
Sbjct: 468 IHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVS 523
Query: 325 PHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDAST 378
Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y
Sbjct: 524 HGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLEN 582
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 437
+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++L
Sbjct: 583 LHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVML 641
>TAIR|locus:2169749 [details] [associations]
symbol:SS1 "starch synthase 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009250 "glucan
biosynthetic process" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0009011
"starch synthase activity" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010021 "amylopectin biosynthetic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019375 "galactolipid
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00152 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AB006701 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP GO:GO:0010021 GO:GO:0019252 EMBL:AY128273 EMBL:AK226881
EMBL:AF121673 IPI:IPI00518916 RefSeq:NP_001190378.1
RefSeq:NP_197818.1 UniGene:At.22528 ProteinModelPortal:Q9FNF2
SMR:Q9FNF2 STRING:Q9FNF2 PaxDb:Q9FNF2 PRIDE:Q9FNF2
EnsemblPlants:AT5G24300.1 EnsemblPlants:AT5G24300.2 GeneID:832497
KEGG:ath:AT5G24300 TAIR:At5g24300 InParanoid:Q9FNF2
PhylomeDB:Q9FNF2 ProtClustDB:CLSN2686324 Genevestigator:Q9FNF2
GermOnline:AT5G24300 Uniprot:Q9FNF2
Length = 652
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 137/367 (37%), Positives = 204/367 (55%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
+ + + ++V F+H ++ GVD VFVDH K + + + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258
RF+LLC AA EAP +L L F+ YGE +F+ NDWH L+P L Y+P G+YK
Sbjct: 256 RFTLLCHAACEAPLVLPLGG---FT--YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKD 310
Query: 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAGI 314
A+ + IHN+A+QG + L LP+++ + ++ + + G +N +K I
Sbjct: 311 ARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAI 370
Query: 315 LESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGV 372
+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I
Sbjct: 371 VTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPF 429
Query: 373 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 432
Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++
Sbjct: 430 HYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDI 488
Query: 433 QIIVLVS 439
Q ++L S
Sbjct: 489 QFVMLGS 495
>TIGR_CMR|BA_5120 [details] [associations]
symbol:BA_5120 "glycogen synthase" species:198094 "Bacillus
anthracis str. Ames" [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] [GO:0009011 "starch synthase activity" evidence=ISS]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_847306.1
RefSeq:YP_021773.2 RefSeq:YP_031002.1 ProteinModelPortal:Q81K85
IntAct:Q81K85 DNASU:1084436 EnsemblBacteria:EBBACT00000008312
EnsemblBacteria:EBBACT00000017669 EnsemblBacteria:EBBACT00000022941
GeneID:1084436 GeneID:2819822 GeneID:2849958 KEGG:ban:BA_5120
KEGG:bar:GBAA_5120 KEGG:bat:BAS4758 OMA:ADVIMVP
ProtClustDB:PRK00654 BioCyc:BANT260799:GJAJ-4812-MONOMER
BioCyc:BANT261594:GJ7F-4972-MONOMER Uniprot:Q81K85
Length = 476
Score = 329 (120.9 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 78/212 (36%), Positives = 121/212 (57%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFK 289
V ++DWHT+++ L+ Y+ +Y+ K V+ IHN+ +QG F E + LL L ++
Sbjct: 128 VLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYF 187
Query: 290 SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG 349
S + ++ Y +N+MK GI+ SD + VSP Y +E + E G +LD ++RK
Sbjct: 188 HS-EQLEFYGN------VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYN 239
Query: 350 IK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
K GIVNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I
Sbjct: 240 DKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISM 298
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVLVS 439
+ RL +QKG D++ ++E+VQ I+L S
Sbjct: 299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGS 330
Score = 57 (25.1 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 36/173 (20%), Positives = 65/173 (37%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYD----QYKDAWDTDVV 140
+NILF +E P+ K+ V I P Y + +D V
Sbjct: 1 MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKV 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
I + +G + + + G+ +D+ ++ + +YG Y D + RF
Sbjct: 61 INVPLGWRNQYCGILKGEQDGITYYLIDNEYYFKR------DSLYG-----HYDDGE-RF 108
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGEDVV-FVANDWHTSLIPCY--LKTMY 250
S +A LE L+ + S + +V F+ + + P Y +KT+Y
Sbjct: 109 SYFSKAVLECIPHLDFEVDVLHSHDWHTAMVNFLLREKYQDN-PLYEHIKTVY 160
>UNIPROTKB|Q9KRB6 [details] [associations]
symbol:glgA "Glycogen synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004373 "glycogen
(starch) synthase activity" evidence=ISS] [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005978 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165 RefSeq:NP_231362.1
ProteinModelPortal:Q9KRB6 DNASU:2613731 GeneID:2613731
KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT Uniprot:Q9KRB6
Length = 484
Score = 331 (121.6 bits), Expect = 6.5e-30, P = 6.5e-30
Identities = 82/248 (33%), Positives = 128/248 (51%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVL 437
NVQ++++
Sbjct: 327 NNVQVVIV 334
>TIGR_CMR|VC_1726 [details] [associations]
symbol:VC_1726 "glycogen synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004373 "glycogen (starch) synthase
activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 KO:K00703 GO:GO:0009011
TIGRFAMs:TIGR02095 ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165
RefSeq:NP_231362.1 ProteinModelPortal:Q9KRB6 DNASU:2613731
GeneID:2613731 KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT
Uniprot:Q9KRB6
Length = 484
Score = 331 (121.6 bits), Expect = 6.5e-30, P = 6.5e-30
Identities = 82/248 (33%), Positives = 128/248 (51%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVL 437
NVQ++++
Sbjct: 327 NNVQVVIV 334
>TIGR_CMR|GSU_1023 [details] [associations]
symbol:GSU_1023 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 RefSeq:NP_952077.1 ProteinModelPortal:Q74ED9
GeneID:2685960 KEGG:gsu:GSU1023 PATRIC:22024816 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 OMA:IYFIDHE ProtClustDB:CLSK924464
BioCyc:GSUL243231:GH27-1018-MONOMER GO:GO:0009011
TIGRFAMs:TIGR02095 Uniprot:Q74ED9
Length = 501
Score = 319 (117.4 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 75/209 (35%), Positives = 117/209 (55%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 290
VF A+DWHT+ +P +L T+Y+ + A V +HN+ +QG F +L + +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH-- 196
Query: 291 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KT 348
F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R
Sbjct: 197 -FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSA 250
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
+ GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +
Sbjct: 251 DLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLV 309
Query: 409 GRLEEQKGSDILAAAIPHFIKENVQIIVL 437
GRL +QKG DILA AI + +VQ+++L
Sbjct: 310 GRLVKQKGIDILAEAIHRILALDVQVVML 338
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/207 (24%), Positives = 88/207 (42%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYK-DAWDTD----- 138
LNIL +E P++K H V + P Y + + + +
Sbjct: 4 LNILMAASECVPFAKEGGLADVVGVLPKYLAHMGHDVRVVMPLYSRIDPERFGLERLPGV 63
Query: 139 VVIELKV-GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQ 197
+V+ + + G++ V V F++H + +G+ +Y Y DN
Sbjct: 64 LVVPMGIMGNQYCGVWEGRLPGSAVPVYFLEHEGY----YGR--EGLY-EEDNVGYMDND 116
Query: 198 LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYK 257
RF L +AA+E P+++ + DV F A+DWHT+ +P +L T+Y+ +
Sbjct: 117 NRFIFLSRAAMELPKLIG----------FAPDV-FHAHDWHTAAVPVFLNTLYRDDPLVG 165
Query: 258 SAKVVFCIHNIAYQGRF---AFEDFGL 281
A V +HN+ +QG F A E G+
Sbjct: 166 GAASVLTVHNMQHQGNFYPGAMEVLGI 192
>TIGR_CMR|GSU_3257 [details] [associations]
symbol:GSU_3257 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_954298.1
ProteinModelPortal:Q747K8 GeneID:2685785 KEGG:gsu:GSU3257
PATRIC:22029355 OMA:DEWNPAA ProtClustDB:CLSK829188
BioCyc:GSUL243231:GH27-3233-MONOMER Uniprot:Q747K8
Length = 484
Score = 308 (113.5 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 71/211 (33%), Positives = 114/211 (54%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DV+ +DW T+LIP L+ + VF IHN+AYQG F LP+
Sbjct: 132 DVIH-CHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSAL 190
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
++ ++++ Y + +N MK IL +D++ TVS Y +E+++ +G L+ ++ +
Sbjct: 191 FTT-EWLEYYGQ------LNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARR 242
Query: 349 G--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 406
G + GIVNG+D EWNP DK I Y A + K K LQ E+G+P ++P+IG
Sbjct: 243 GDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIG 301
Query: 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVL 437
+ RL EQKG D++ +P + +Q ++L
Sbjct: 302 MVSRLAEQKGIDLVLELLPRLAESELQFVLL 332
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 55/218 (25%), Positives = 94/218 (43%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L V +EVAP+++T H V I P Y + A T++ + K
Sbjct: 1 MKVLMVASEVAPFARTGGLAEVTAALPAALRRMGHDVRVIMPFY---RCAAQTELGVR-K 56
Query: 145 VGDKIEKVRFFHCHKRGVDRVFV-DHPWFLAKVWGK-TQSKIYGPRTGEDYQDNQLRFSL 202
E HK + + + D P +L + ++ +YG G DY DN RF+
Sbjct: 57 ARKSAEVSLNGETHKGFLRQAALGDVPVYLVENREFFSRDYLYGTPEG-DYPDNPRRFAF 115
Query: 203 LCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 262
C++ L+ + ++ P DV+ +DW T+LIP L+ + V
Sbjct: 116 FCRSVLQFLKRMDFR-------P---DVIH-CHDWQTALIPIILRLEAADDPFFARTATV 164
Query: 263 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
F IHN+AYQG F LP+ ++ ++++ Y +
Sbjct: 165 FTIHNLAYQGLFPAPAIAETGLPSALFTT-EWLEYYGQ 201
>UNIPROTKB|P0A6U8 [details] [associations]
symbol:glgA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0009011 "starch synthase activity" evidence=IEA;IDA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA;IMP]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0005978 GO:GO:0006974 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP ProtClustDB:PRK00654 EMBL:V00281 EMBL:J02616
EMBL:J01616 PIR:H65138 RefSeq:NP_417887.1 RefSeq:YP_492004.1
PDB:2QZS PDB:2R4T PDB:2R4U PDB:3COP PDB:3CX4 PDB:3D1J PDB:3GUH
PDBsum:2QZS PDBsum:2R4T PDBsum:2R4U PDBsum:3COP PDBsum:3CX4
PDBsum:3D1J PDBsum:3GUH ProteinModelPortal:P0A6U8 SMR:P0A6U8
IntAct:P0A6U8 PRIDE:P0A6U8 EnsemblBacteria:EBESCT00000004694
EnsemblBacteria:EBESCT00000004695 EnsemblBacteria:EBESCT00000004696
EnsemblBacteria:EBESCT00000016997 GeneID:12933507 GeneID:947932
KEGG:ecj:Y75_p3748 KEGG:eco:b3429 PATRIC:32122298 EchoBASE:EB0372
EcoGene:EG10377 HOGENOM:HOG000294941
BioCyc:EcoCyc:GLYCOGENSYN-MONOMER BioCyc:ECOL316407:JW3392-MONOMER
BioCyc:MetaCyc:GLYCOGENSYN-MONOMER EvolutionaryTrace:P0A6U8
Genevestigator:P0A6U8 Uniprot:P0A6U8
Length = 477
Score = 291 (107.5 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 84/255 (32%), Positives = 127/255 (49%)
Query: 188 RTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGEDVVFVANDWHTSLIPCY 245
R G Y D L F+ A +L + SG P+ V A+DWH L P Y
Sbjct: 90 RPGSPYHDTNL-FAYTDNVLRFA--LLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAY 146
Query: 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305
L +P AK VF +HN+AYQG F + LP F F+ I G G+
Sbjct: 147 LAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF---FN-IHGLE--FNGQ 194
Query: 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEW 362
I+++KAG+ +D + VSP YA+E+ + G+E L R+ + G++NG+D + W
Sbjct: 195 -ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIW 253
Query: 363 NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 422
+P TD + +Y T+ D K K LQ +GL VD +P+ + RL QKG D++
Sbjct: 254 SPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312
Query: 423 AIPHFIKENVQIIVL 437
A+P +++ Q+ +L
Sbjct: 313 ALPGLLEQGGQLALL 327
>TAIR|locus:2141936 [details] [associations]
symbol:SS4 "starch synthase 4" species:3702 "Arabidopsis
thaliana" [GO:0009011 "starch synthase activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009250
"glucan biosynthetic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=ISS] [GO:0005982 "starch
metabolic process" evidence=RCA;IMP] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0001666 "response to hypoxia"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR013534 Pfam:PF08323
EMBL:AL161548 GO:GO:0009501 GO:GO:0005982 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0019252 EMBL:AL021713 EMBL:AK226610
IPI:IPI00524471 PIR:T04926 RefSeq:NP_193558.3 UniGene:At.46236
ProteinModelPortal:Q0WVX5 STRING:Q0WVX5 PRIDE:Q0WVX5
EnsemblPlants:AT4G18240.1 GeneID:827550 KEGG:ath:AT4G18240
TAIR:At4g18240 InParanoid:Q0WVX5 OMA:LVGCITR PhylomeDB:Q0WVX5
ProtClustDB:PLN02939 Genevestigator:Q0WVX5 Uniprot:Q0WVX5
Length = 1040
Score = 281 (104.0 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 87/256 (33%), Positives = 134/256 (52%)
Query: 190 GEDY--QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI-PCYL 246
G+ Y QD+ RFS +AALE L L S K P D++ +DW T+ + P Y
Sbjct: 641 GQFYGEQDDFRRFSYFSRAALE----LLLQSGKK---P---DIIH-CHDWQTAFVAPLYW 689
Query: 247 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306
+Y PKG+ SA++ F HN YQG + + G L + D + ++ G +
Sbjct: 690 D-LYAPKGL-DSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSS---GDR 744
Query: 307 INWMKAGILESDMVLTVSPHYAQELVSGED-KGVELD-NIIRKTGIKGIVNGMDVQEWNP 364
+N +K I+ S++V TVSP YAQE+ + E KG+ N K I GI+NG+D WNP
Sbjct: 745 VNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFI-GILNGIDTDSWNP 803
Query: 365 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAA 423
TD ++ +++A + K K AL+ ++GL + P++G I RL QKG ++ A
Sbjct: 804 ATDPFLKAQFNAKD-LQGKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHA 862
Query: 424 IPHFIKENVQIIVLVS 439
I ++ Q ++L S
Sbjct: 863 IYRTLELGGQFVLLGS 878
Score = 151 (58.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 61/207 (29%), Positives = 91/207 (43%)
Query: 84 GLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYD--QY---KDAWDTD 138
GL ++ + E+AP +K H V I P+YD QY +D D
Sbjct: 541 GLYVVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALD 600
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
V+E K+ K + + G+ F++ P +K + + Q YG QD+
Sbjct: 601 TVVESYFDGKLYKNKIWIGTVEGLPVHFIE-PQHPSKFFWRGQ--FYGE------QDDFR 651
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI-PCYLKTMYKPKGMYK 257
RFS +AALE L L S K P D++ +DW T+ + P Y +Y PKG+
Sbjct: 652 RFSYFSRAALE----LLLQSGKK---P---DIIH-CHDWQTAFVAPLYWD-LYAPKGL-D 698
Query: 258 SAKVVFCIHNIAYQGRFAFEDFGLLNL 284
SA++ F HN YQG + + G L
Sbjct: 699 SARICFTCHNFEYQGTASASELGSCGL 725
Score = 39 (18.8 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 31 KFRCMKHSGLRSLNIIDDLQVKTMASKL 58
K+ CM++ +R L +D + KL
Sbjct: 584 KYDCMQYDRVRDLRALDTVVESYFDGKL 611
Score = 37 (18.1 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 46 IDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNIL 88
+D++ V +A L+ ++ G Q G + ++ NIL
Sbjct: 158 LDNITVPEVAKALSLNKSEGEQISDGQFGELMTMIRSAEKNIL 200
>UNIPROTKB|Q4KCP0 [details] [associations]
symbol:glgA "Glycogen synthase" species:220664 "Pseudomonas
protegens Pf-5" [GO:0004373 "glycogen (starch) synthase activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978 EMBL:CP000076
GenomeReviews:CP000076_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 HOGENOM:HOG000294941 RefSeq:YP_259993.2
STRING:Q4KCP0 GeneID:3477958 KEGG:pfl:PFL_2887 PATRIC:19875075
BioCyc:PFLU220664:GIX8-2901-MONOMER GO:GO:0004373 Uniprot:Q4KCP0
Length = 522
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/213 (27%), Positives = 97/213 (45%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
D+V A+DW L P Y+ +G + +F IHN+AYQG + L +P
Sbjct: 177 DLVH-AHDWPAGLAPAYMHW----RG--QRTPTLFTIHNLAYQGVVSLASCPELGIPEHA 229
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-K 347
+ ++ Y K ++++KAG+ + + TVS YAQE+ + G LD + K
Sbjct: 230 LQQ-EGMEFYGK------LSFLKAGMAYASHITTVSATYAQEITTPAF-GCGLDGFLASK 281
Query: 348 T--GI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404
T G+ GI NG+D + W+ TD ++ + D K ++ GL P+
Sbjct: 282 TQQGLLSGIPNGID-ESWDAATDAHLLTPFSIGD-WDGKAANAAHVRQMFGLDASSG-PL 338
Query: 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL 437
+ RL QKG D+ A ++ QI ++
Sbjct: 339 FAVVSRLVYQKGLDLTEAVAEFIVQSGGQIAII 371
>UNIPROTKB|Q9XHN9 [details] [associations]
symbol:Q9XHN9 "Granule bound starch synthase" species:39947
"Oryza sativa Japonica Group" [GO:0005982 "starch metabolic
process" evidence=IEP] GO:GO:0009507 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 GO:GO:0005982 EMBL:AF092444 STRING:Q9XHN9
Gramene:Q9XHN9 Uniprot:Q9XHN9
Length = 113
Score = 96 (38.9 bits), Expect = 0.00045, P = 0.00045
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKT 100
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKT 98
>TIGR_CMR|SO_1499 [details] [associations]
symbol:SO_1499 "glycogen synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
GO:GO:0009058 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR013534 Pfam:PF08323 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 RefSeq:NP_717116.1 ProteinModelPortal:Q8EGU2
GeneID:1169309 KEGG:son:SO_1499 PATRIC:23522640 OMA:TKFAFLC
ProtClustDB:CLSK906292 Uniprot:Q8EGU2
Length = 534
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00071
Identities = 75/304 (24%), Positives = 126/304 (41%)
Query: 176 VWGKTQSKIYGPRTGE-DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234
+W +IY T + + D+ +F+ LC + +A +G +
Sbjct: 94 LWQSIPGQIYSQGTKDRPFADDATKFAFLCVSVAKA----------LVTGLVPMPQLLHL 143
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQG-RFAFEDFGLLNLPAQFKSSFD 293
+DWHT + L+ + ++ + VF IHN+A QG R D + A F S F
Sbjct: 144 HDWHTGCL-AMLRALAPEYQALQAIECVFSIHNLALQGIRPLGHDAS--SFAAWFPSLFA 200
Query: 294 FIDGYN-----KPVRGRKINWMKAGILESDMVLTVSPHYAQELV----------SGEDKG 338
+D P IN M+ GI +D V VSP YA+E++ GE
Sbjct: 201 HLDVTQLADIIDPRYPHCINPMRMGIRLADRVHLVSPTYAKEVLLPSQPERGFFGGEGLE 260
Query: 339 VELDNIIRKTGIKGIVNGMDV-QEWNPLTDKYIGVKYDASTVMDAKPLLKE--ALQAEVG 395
+L + + + GI+NG D Q + K +G+ + + D + L + A Q++V
Sbjct: 261 ADLQHKADQGRVLGILNGCDYPQALTKKSFKRMGLAEFTALLSDIESALVQWQATQSQV- 319
Query: 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV------QIIVLVSITIRNYSTLY 449
R + +I F RL+ L A P F+ +V ++++L I S L
Sbjct: 320 ----RGVDMIAFT-RLQALWRQASLEA-FPAFLLTSVGRLTDQKVLILRHILPSGLSVLE 373
Query: 450 TFIM 453
T ++
Sbjct: 374 TLLL 377
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 454 436 0.00088 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 621 (66 KB)
Total size of DFA: 275 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.61u 0.14s 30.75t Elapsed: 00:00:02
Total cpu time: 30.61u 0.14s 30.75t Elapsed: 00:00:02
Start: Tue May 21 01:37:01 2013 End: Tue May 21 01:37:03 2013